Citrus Sinensis ID: 039276

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260---
Protein Sequence
YNRLQDSLRNSIGDLTSLKSLDLSNNNFSGLFLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQTLATISYMAPDTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM
Secondary Structure (PSIPRED)
cccccccccccccccccHHHHHHHHcccccccccccccccccccccEEEEEEEccccEEEEEEEEcccccccccHHHHHHHHHcccccccccEEEEcccccccEEEEEcccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccEEccccccccccccccHHHHHHHHHHHcccccccccccccccHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccEEcHHHHHHHHccccccccccHHccccccccccEEEEEcccccEEEEEEEcccccccHHHHHHHHHHHHHHHcHcHHEEEEEEEccccEEEEEEEcccccHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHcccHEEEccccccEEEEEEcccccccccHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHccHHHHccHHHcccccccccccHHHHHHHHHHHHHHHcccHccccccccc
Coil and Loop (DISEMBL)
YNRLQDSLRnsigdltslksldlsnnnfsGLFLFsesnlisrggfgsiykaKIQDGMEVVVKGFnlqyggafknldVECNMMKIIRHQNLIKIISSCSKDDFKALILecmphgslgkclstsnYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQTLATisymapdtynFGIMIMetfsgkkptikffHGEMTLKHWVNDLLPNSVMKVVSANllsredehfmtkEQCMSFVFNLAMectvespnqrinakem
Flexible Loop (DISEMBL)
YNRLQDSLRNSIGDLTSLKSLDLSNNNFSGLFLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQTLATISYMAPDTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECtvespnqrinakem
Low Complexity Region (SEG)
YNRLQDSLRNSIGDLTSLKSLDLSNNNFSGLFLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQTLATISYMAPDTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM
Disordered region (IsUnstruct)
********************LDLSNNNFSGLFLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQTLATISYMAPDTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTV************
Disordered Region (DISOPRED)
************GDLTSLKSLDLSNNNFSGLFLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYG*AFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQTLATISYMAPDTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINA***
Disordered Region (DISEMBL)
YNRLQDSLRNSIGDLTSLKSLDLSNNNFSGLFLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQTLATISYMAPDTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM
Disordered Region (DISPRO)
**********SIGDLTSLKSLDLSNNNFSGLFLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQTLATISYMAPDTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVES**********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
YNRLQDSLRNSIGDLTSLKSLDLSNNNFSGLFLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQTLATISYMAPDTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	263	2.2.26 [Sep-21-2011]
C0LGP4	1010	Probable LRR receptor-lik	yes	no	0.851	0.221	0.329	4e-33
Q9SD62	1025	Putative receptor-like pr	no	no	0.866	0.222	0.317	1e-28
C0LGT6	1031	LRR receptor-like serine/	no	no	0.825	0.210	0.311	2e-24
Q9ZUI0	980	Putative leucine-rich rep	no	no	0.832	0.223	0.274	1e-21
C0LGI2	929	Probable LRR receptor-lik	no	no	0.749	0.212	0.295	5e-21
Q9C7S5	1095	Tyrosine-sulfated glycope	no	no	0.920	0.221	0.260	1e-18
Q9M9E0	656	L-type lectin-domain cont	no	no	0.851	0.341	0.248	1e-18
Q7X8C5	748	Wall-associated receptor	no	no	0.851	0.299	0.271	7e-18
Q9M3D7	667	Putative L-type lectin-do	no	no	0.942	0.371	0.25	1e-17
O49564	642	Cysteine-rich receptor-li	no	no	0.821	0.336	0.260	2e-17

>sp|C0LGP4|Y3475_ARATH Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=1 SV=1

 Score =  141 bits (356), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 94/285 (32%), Positives = 138/285 (48%), Gaps = 61/285 (21%)

Query: 34  FSESNLISRGGFGSIYKAKIQDGMEVV-VKGFNLQYGGAFKNLDVECNMMKIIRHQNLIK 92
           FS SN++  G FG++YKA +    +VV VK  N+Q  GA K+   EC  +K IRH+NL+K
Sbjct: 702 FSSSNMVGSGSFGTVYKALLLTEKKVVAVKVLNMQRRGAMKSFMAECESLKDIRHRNLVK 761

Query: 93  IISSCSKDD-----FKALILECMPHGSLGKCLST--------SNYILDFFQRLHIMIDVA 139
           ++++CS  D     F+ALI E MP+GSL   L           +  L   +RL+I IDVA
Sbjct: 762 LLTACSSIDFQGNEFRALIYEFMPNGSLDMWLHPEEVEEIHRPSRTLTLLERLNIAIDVA 821

Query: 140 SAVEYLH-----------------------------FGHSTHLLLKEDQS-----LTQIQ 165
           S ++YLH                             FG +  LLLK D+      L+   
Sbjct: 822 SVLDYLHVHCHEPIAHCDLKPSNVLLDDDLTAHVSDFGLA-RLLLKFDEESFFNQLSSAG 880

Query: 166 TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLP 213
              TI Y AP            D Y+FGI+++E F+GK+PT + F G  TL  +    LP
Sbjct: 881 VRGTIGYAAPEYGVGGQPSINGDVYSFGILLLEMFTGKRPTNELFGGNFTLNSYTKSALP 940

Query: 214 NSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRI 258
             ++ +V  ++L           +C++ VF + + C  ESP  R+
Sbjct: 941 ERILDIVDESILHIGLRVGFPVVECLTMVFEVGLRCCEESPMNRL 985

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q9SD62|Y3471_ARATH Putative receptor-like protein kinase At3g47110 OS=Arabidopsis thaliana GN=At3g47110 PE=3 SV=1

 Score =  127 bits (318), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 92/290 (31%), Positives = 132/290 (45%), Gaps = 62/290 (21%)

Query: 34   FSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIK 92
            FS SNLI  G FG+++K  +      V +K  NL   GA K+   EC  +  IRH+NL+K
Sbjct: 719  FSSSNLIGSGNFGAVFKGFLGSKNKAVAIKVLNLCKRGAAKSFIAECEALGGIRHRNLVK 778

Query: 93   IISSCSK-----DDFKALILECMPHGSLGKCL--------STSNYILDFFQRLHIMIDVA 139
            +++ CS      +DF+AL+ E MP+G+L   L           +  L  F RL+I IDVA
Sbjct: 779  LVTICSSSDFEGNDFRALVYEFMPNGNLDMWLHPDEIEETGNPSRTLGLFARLNIAIDVA 838

Query: 140  SAVEYLH-----------------------------FGHSTHLLLKEDQSLTQIQ----- 165
            SA+ YLH                             FG +  LLLK D+    IQ     
Sbjct: 839  SALVYLHTYCHNPIAHCDIKPSNILLDKDLTAHVSDFGLA-QLLLKFDRDTFHIQFSSAG 897

Query: 166  TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLL- 212
               TI Y AP            D Y+FGI+++E F+GK+PT K F   +TL  +    L 
Sbjct: 898  VRGTIGYAAPEYGMGGHPSIMGDVYSFGIVLLEIFTGKRPTNKLFVDGLTLHSFTKSALQ 957

Query: 213  PNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKE 262
                + +    +L           +C++ VF + + C+ ESP  RI+  E
Sbjct: 958  KRQALDITDETILRGAYAQHFNMVECLTLVFRVGVSCSEESPVNRISMAE 1007

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGT6|EFR_ARATH LRR receptor-like serine/threonine-protein kinase EFR OS=Arabidopsis thaliana GN=EFR PE=1 SV=1

 Score =  112 bits (281), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 129/289 (44%), Gaps = 72/289 (24%)

Query: 34  FSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIK 92
           FS +NLI  G FG+++K  +  +   V VK  NL   GA K+   EC   K IRH+NL+K
Sbjct: 712 FSSTNLIGSGNFGNVFKGLLGPENKLVAVKVLNLLKHGATKSFMAECETFKGIRHRNLVK 771

Query: 93  IISSCSK-----DDFKALILECMPHGSLGKCLSTSNY--------ILDFFQRLHIMIDVA 139
           +I+ CS      +DF+AL+ E MP GSL   L   +          L   ++L+I IDVA
Sbjct: 772 LITVCSSLDSEGNDFRALVYEFMPKGSLDMWLQLEDLERVNDHSRSLTPAEKLNIAIDVA 831

Query: 140 SAVEYLH-----------------------------FGHSTHLLLKEDQS--LTQIQTL- 167
           SA+EYLH                             FG +  LL K D+   L Q  +  
Sbjct: 832 SALEYLHVHCHDPVAHCDIKPSNILLDDDLTAHVSDFGLA-QLLYKYDRESFLNQFSSAG 890

Query: 168 --ATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLP 213
              TI Y AP            D Y+FGI+++E FSGKKPT + F G+  L  +   +L 
Sbjct: 891 VRGTIGYAAPEYGMGGQPSIQGDVYSFGILLLEMFSGKKPTDESFAGDYNLHSYTKSILS 950

Query: 214 NSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKE 262
                  S  +           ++ +  V  + ++C+ E P  R+   E
Sbjct: 951 GCTSSGGSNAI-----------DEGLRLVLQVGIKCSEEYPRDRMRTDE 988

Constitutes the pattern-recognition receptor (PPR) that determines the specific perception of elongation factor Tu (EF-Tu), a potent elicitor of the defense response to pathogen-associated molecular patterns (PAMPs). Reduces transformation by Rhizobium radiobacter probably by inducing plant defense during the interaction. Binding to the effector AvrPto1 from P.syringae blocks the downstream plant immune response.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9ZUI0|Y2241_ARATH Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g24130 OS=Arabidopsis thaliana GN=At2g24130 PE=3 SV=1

 Score =  103 bits (257), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 129/288 (44%), Gaps = 69/288 (23%)

Query: 34  FSESNLISRGGFGSIYKAKIQDGMEVVVKGFN----LQYGGAFKNLDVECNMMKIIRHQN 89
           F+ S+LI  G FG +YK  +++  +V VK  +    L++ G+FK    EC ++K  RH+N
Sbjct: 661 FNASSLIGSGRFGHVYKGVLRNNTKVAVKVLDPKTALEFSGSFKR---ECQILKRTRHRN 717

Query: 90  LIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYI---LDFFQRLHIMIDVASAVEYLH 146
           LI+II++CSK  F AL+L  MP+GSL + L    Y    LD  Q ++I  DVA  + YLH
Sbjct: 718 LIRIITTCSKPGFNALVLPLMPNGSLERHLYPGEYSSKNLDLIQLVNICSDVAEGIAYLH 777

Query: 147 FGHS---THLLLKE-----DQSLTQIQT------------------------------LA 168
                   H  LK      D  +T + T                                
Sbjct: 778 HYSPVKVVHCDLKPSNILLDDEMTALVTDFGISRLVQGVEETVSTDDSVSFGSTDGLLCG 837

Query: 169 TISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSV 216
           ++ Y+AP            D Y+FG++++E  SG++PT    +   +L  ++    P+S+
Sbjct: 838 SVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVSGRRPTDVLVNEGSSLHEFMKSHYPDSL 897

Query: 217 MKVVSANLLSREDEHFMTKEQCMSF-------VFNLAMECTVESPNQR 257
             ++   L   + +     E+C          +  L + CT  +P+ R
Sbjct: 898 EGIIEQALSRWKPQG--KPEKCEKLWREVILEMIELGLVCTQYNPSTR 943

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGI2|Y1677_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1

 Score =  101 bits (252), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 116/247 (46%), Gaps = 50/247 (20%)

Query: 8   LRNSIGDLTSLKSLDLSNNNFSGLFLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQ 67
           L   +    SL  L+ + +NFS          + RG FGS+Y  +++DG EV VK     
Sbjct: 588 LDEGVAYFISLPVLEEATDNFS--------KKVGRGSFGSVYYGRMKDGKEVAVKITADP 639

Query: 68  YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCL-STSNY-I 125
                +    E  ++  I H+NL+ +I  C + D + L+ E M +GSLG  L  +S+Y  
Sbjct: 640 SSHLNRQFVTEVALLSRIHHRNLVPLIGYCEEADRRILVYEYMHNGSLGDHLHGSSDYKP 699

Query: 126 LDFFQRLHIMIDVASAVEYLHFG----------HSTHLLL---------------KEDQS 160
           LD+  RL I  D A  +EYLH G           S+++LL               + ++ 
Sbjct: 700 LDWLTRLQIAQDAAKGLEYLHTGCNPSIIHRDVKSSNILLDINMRAKVSDFGLSRQTEED 759

Query: 161 LTQIQTLA--TISYMAP------------DTYNFGIMIMETFSGKKP-TIKFFHGEMTLK 205
           LT + ++A  T+ Y+ P            D Y+FG+++ E  SGKKP + + F  E+ + 
Sbjct: 760 LTHVSSVAKGTVGYLDPEYYASQQLTEKSDVYSFGVVLFELLSGKKPVSAEDFGPELNIV 819

Query: 206 HWVNDLL 212
           HW   L+
Sbjct: 820 HWARSLI 826

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9C7S5|PSYR1_ARATH Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana GN=PSYR1 PE=2 SV=1

 Score = 94.0 bits (232), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/299 (26%), Positives = 138/299 (46%), Gaps = 57/299 (19%)

Query: 9    RNSIGDLTSLKSLDLSNNNFSGLFLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQY 68
            R  + DLT  + L  ++N       FS++N+I  GGFG +YKA + +G ++ VK     Y
Sbjct: 785  RYEVKDLTIFELLKATDN-------FSQANIIGCGGFGLVYKATLDNGTKLAVKKLTGDY 837

Query: 69   GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCL---STSNYI 125
            G   K    E  ++   +H+NL+ +   C  D  + LI   M +GSL   L         
Sbjct: 838  GMMEKEFKAEVEVLSRAKHENLVALQGYCVHDSARILIYSFMENGSLDYWLHENPEGPAQ 897

Query: 126  LDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQS------------------------- 160
            LD+ +RL+IM   +S + Y+H     H++ ++ +S                         
Sbjct: 898  LDWPKRLNIMRGASSGLAYMHQICEPHIVHRDIKSSNILLDGNFKAYVADFGLSRLILPY 957

Query: 161  LTQIQT--LATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMT--L 204
             T + T  + T+ Y+ P            D Y+FG++++E  +GK+P ++ F  +M+  L
Sbjct: 958  RTHVTTELVGTLGYIPPEYGQAWVATLRGDVYSFGVVMLELLTGKRP-MEVFRPKMSREL 1016

Query: 205  KHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM 263
              WV+ +  +   + V   LL RE  +    E+ M  V ++A  C  ++P +R N +++
Sbjct: 1017 VAWVHTMKRDGKPEEVFDTLL-RESGN----EEAMLRVLDIACMCVNQNPMKRPNIQQV 1070

Tyrosine-sulfated glycopeptide receptor with a serine/threonine-protein kinase activity. Regulates, in response to tyrosine-sulfated glycopeptide binding, a signaling cascade involved in cellular proliferation and plant growth. Not involved in PSK perception.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9M9E0|LRKS1_ARATH L-type lectin-domain containing receptor kinase S.1 OS=Arabidopsis thaliana GN=LECRKS1 PE=1 SV=1

 Score = 94.0 bits (232), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 121/274 (44%), Gaps = 50/274 (18%)

Query: 33  LFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIK 92
           +FS   L+  GGFG +Y+  + +  E+ VK  N       +    E + M  ++H+NL++
Sbjct: 360 VFSNDRLLGSGGFGKVYRGILSNNSEIAVKCVNHDSKQGLREFMAEISSMGRLQHKNLVQ 419

Query: 93  IISSCSKDDFKALILECMPHGSLGKCL-STSNYILDFFQRLHIMIDVASAVEYLHFG--- 148
           +   C + +   L+ + MP+GSL + +       + + +R  ++ DVA  + YLH G   
Sbjct: 420 MRGWCRRKNELMLVYDYMPNGSLNQWIFDNPKEPMPWRRRRQVINDVAEGLNYLHHGWDQ 479

Query: 149 -------HSTHLLLKE-------DQSLTQI----------QTLATISYMAP--------- 175
                   S+++LL         D  L ++          + + T+ Y+AP         
Sbjct: 480 VVIHRDIKSSNILLDSEMRGRLGDFGLAKLYEHGGAPNTTRVVGTLGYLAPELASASAPT 539

Query: 176 ---DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHF 232
              D Y+FG++++E  SG++P       +M L  WV DL      +VV A      DE  
Sbjct: 540 EASDVYSFGVVVLEVVSGRRPIEYAEEEDMVLVDWVRDLYGGG--RVVDA-----ADERV 592

Query: 233 MTKEQCMSFV---FNLAMECTVESPNQRINAKEM 263
            ++ + M  V     L + C    P +R N +E+
Sbjct: 593 RSECETMEEVELLLKLGLACCHPDPAKRPNMREI 626

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q7X8C5|WAKLB_ARATH Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1

 Score = 90.9 bits (224), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 126/273 (46%), Gaps = 49/273 (17%)

Query: 34  FSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKI 93
           F+++ ++ +GG G++YK  + DG  V VK          +    E  ++  I H+N++K+
Sbjct: 416 FNKNRVLGQGGQGTVYKGMLVDGRIVAVKRSKAVDEDRVEEFINEVVVLAQINHRNIVKL 475

Query: 94  ISSCSKDDFKALILECMPHGSLGKCL--STSNYILDFFQRLHIMIDVASAVEYLHFGHS- 150
           +  C + +   L+ E +P+G L K L   + +Y + +  RLHI I++A A+ YLH   S 
Sbjct: 476 LGCCLETEVPVLVYEFVPNGDLCKRLHDESDDYTMTWEVRLHIAIEIAGALSYLHSAASF 535

Query: 151 ---------THLLLKE-----------------DQSLTQIQTLATISYMAP--------- 175
                    T++LL E                 DQ+    Q   T  Y+ P         
Sbjct: 536 PIYHRDIKTTNILLDERNRAKVSDFGTSRSVTIDQTHLTTQVAGTFGYVDPEYFQSSKFT 595

Query: 176 ---DTYNFGIMIMETFSGKKPTIKFFHGEMT--LKHWVNDLLPNSVMKVVSANLLSREDE 230
              D Y+FG++++E  +G+KP+ +    E      H+V  +  N V+ +V   +   +DE
Sbjct: 596 EKSDVYSFGVVLVELLTGEKPSSRVRSEENRGLAAHFVEAVKENRVLDIVDDRI---KDE 652

Query: 231 HFMTKEQCMSFVFNLAMECTVESPNQRINAKEM 263
             M  +Q MS V NLA  C      +R N +E+
Sbjct: 653 CNM--DQVMS-VANLARRCLNRKGKKRPNMREV 682

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9M3D7|LRK14_ARATH Putative L-type lectin-domain containing receptor kinase I.4 OS=Arabidopsis thaliana GN=LECRK14 PE=3 SV=1

 Score = 90.5 bits (223), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/308 (25%), Positives = 129/308 (41%), Gaps = 60/308 (19%)

Query: 1   YNRLQDSLRNSIGD-LTSLKSLDLSNNNFSGLFLFSESNLISRGGFGSIYKAKIQDGMEV 59
           Y  +++S     G    S KSL  + N F       +  L+ +GGFG +YK  +  G  +
Sbjct: 322 YAEVKESWEKEYGPHRYSYKSLYKATNGFV------KDALVGKGGFGKVYKGTLPGGRHI 375

Query: 60  VVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCL 119
            VK  +       K    E   M  I+H+NL+ ++  C +     L+ E M +GSL + L
Sbjct: 376 AVKRLSHDAEQGMKQFVAEVVTMGNIQHRNLVPLLGYCRRKGELLLVSEYMSNGSLDQYL 435

Query: 120 -STSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQS------------------ 160
               N    + QR+ I+ D+ASA+ YLH G +  +L ++ ++                  
Sbjct: 436 FYNQNPSPSWLQRISILKDIASALNYLHSGANPAVLHRDIKASNVMLDSEYNGRLGDFGM 495

Query: 161 ---------LTQIQTLATISYMAP-----------DTYNFGIMIMETFSGKKPTIKFFHG 200
                    L+    + TI YMAP           D Y FGI ++E   G++P    F  
Sbjct: 496 AKFQDPQGNLSATAAVGTIGYMAPELIRTGTSKETDVYAFGIFLLEVTCGRRP----FEP 551

Query: 201 EMTLK-----HWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPN 255
           E+ ++      WV +    + +       L RE   F+++E  +  V  L + CT + P 
Sbjct: 552 ELPVQKKYLVKWVCECWKQASLLETRDPKLGRE---FLSEE--VEMVLKLGLLCTNDVPE 606

Query: 256 QRINAKEM 263
            R +  ++
Sbjct: 607 SRPDMGQV 614

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O49564|CRK27_ARATH Cysteine-rich receptor-like protein kinase 27 OS=Arabidopsis thaliana GN=CRK27 PE=3 SV=2

 Score = 89.7 bits (221), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 126/269 (46%), Gaps = 53/269 (19%)

Query: 34  FSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKI 93
           FS +N I  GGFG +YK  + DG+E+ VK  ++  G        E  +M  ++H+NL+K+
Sbjct: 333 FSLTNKIGEGGFGVVYKGHLPDGLEIAVKRLSIHSGQGNAEFKTEVLLMTKLQHKNLVKL 392

Query: 94  ISSCSKDDFKALILECMPHGSLGKCL--STSNYILDFFQRLHIMIDVASAVEYLHFG--- 148
                K+  + L+ E +P+ SL + L        LD+ +R +I++ V+  + YLH G   
Sbjct: 393 FGFSIKESERLLVYEFIPNTSLDRFLFDPIKQKQLDWEKRYNIIVGVSRGLLYLHEGSEF 452

Query: 149 -------HSTHLLLKED-------------------QSLTQIQTLATISYMAP------- 175
                   S+++LL E                    Q++T+ + + T  YMAP       
Sbjct: 453 PIIHRDLKSSNVLLDEQMLPKISDFGMARQFDFDNTQAVTR-RVVGTYGYMAPEYAMHGR 511

Query: 176 -----DTYNFGIMIMETFSGKKPT-IKFFHG-EMTLKHWVNDLLPNSVMKVVSANLLSRE 228
                D Y+FG++++E  +GK+ + +    G ++    W N  +  + M+++   LL   
Sbjct: 512 FSVKTDVYSFGVLVLEIITGKRNSGLGLGEGTDLPTFAWQN-WIEGTSMELIDPVLLQTH 570

Query: 229 DEHFMTKEQCMSFVFNLAMECTVESPNQR 257
           D+      QC+     +A+ C  E+P +R
Sbjct: 571 DKK--ESMQCL----EIALSCVQENPTKR 593

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	263
359483198	1087	PREDICTED: probable LRR receptor-like se	0.874	0.211	0.461	9e-62
224139658	1019	predicted protein [Populus trichocarpa]	0.874	0.225	0.449	1e-59
359485176	1160	PREDICTED: probable LRR receptor-like se	0.863	0.195	0.466	1e-59
359485453	1202	PREDICTED: probable LRR receptor-like se	0.870	0.190	0.464	1e-58
359485451	1454	PREDICTED: LRR receptor-like serine/thre	0.863	0.156	0.453	1e-58
302143440	929	unnamed protein product [Vitis vinifera]	0.863	0.244	0.453	2e-58
224116832	1061	predicted protein [Populus trichocarpa]	0.870	0.215	0.446	3e-58
359483677	1229	PREDICTED: LRR receptor-like serine/thre	0.866	0.185	0.455	5e-58
147853795	1420	hypothetical protein VITISV_005816 [Viti	0.870	0.161	0.460	1e-57
147776333	1205	hypothetical protein VITISV_000078 [Viti	0.866	0.189	0.447	2e-57

>gi|359483198|ref|XP_002271405.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Vitis vinifera]

 Score =  243 bits (619), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 125/271 (46%), Positives = 168/271 (61%), Gaps = 41/271 (15%)

Query: 34   FSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKI 93
            FS  NL+ RG  GS+Y+  + DG    +K FNLQ   AFK+ D EC +M  IRH+NLIKI
Sbjct: 804  FSAGNLLGRGSLGSVYRGTLSDGKNAAIKVFNLQEEAAFKSFDAECEVMHHIRHRNLIKI 863

Query: 94   ISSCSKD--DFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHST 151
            +SSCS    DFKAL+LE +P+GSL + L + NY LD  QRL+IMIDVA A+EYLH G ST
Sbjct: 864  VSSCSNSYIDFKALVLEYVPNGSLERWLYSHNYCLDILQRLNIMIDVALAMEYLHHGCST 923

Query: 152  HL---------------------------LLKEDQSLTQIQTLATISYMAP--------- 175
             +                           LL+E++S+ + QTLATI YMAP         
Sbjct: 924  PVVHCDLKPSNILLDEDFGGHVGDFGIAKLLREEESIRETQTLATIGYMAPKYVSNGIVT 983

Query: 176  ---DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHF 232
               D Y++GI++METF+ ++PT + F  EM++K+WV D L  S+ +VV ANLL  EDE F
Sbjct: 984  TSGDVYSYGIVLMETFTRRRPTDEIFSEEMSMKNWVWDWLCGSITEVVDANLLRGEDEQF 1043

Query: 233  MTKEQCMSFVFNLAMECTVESPNQRINAKEM 263
            M K+QC+S +  LAM+C  +SP +RI  K++
Sbjct: 1044 MAKKQCISLILGLAMDCVADSPEERIKMKDV 1074

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224139658|ref|XP_002323215.1| predicted protein [Populus trichocarpa] gi|222867845|gb|EEF04976.1| predicted protein [Populus trichocarpa]

 Score =  235 bits (600), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 121/269 (44%), Positives = 168/269 (62%), Gaps = 39/269 (14%)

Query: 34  FSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKI 93
           F ESNL+  G FGS+Y+ +++DG+ V VK FNLQ   AF++ D EC +M+ IRH+NL+KI
Sbjct: 731 FHESNLLGIGSFGSVYQGRLRDGLNVAVKIFNLQLQRAFRSFDTECEIMRNIRHRNLVKI 790

Query: 94  ISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHL 153
           I SCS  DFKAL+LE MP GSL K L + NY LD  QR++IMIDVASA+EYLH G+ + +
Sbjct: 791 ICSCSNLDFKALVLEYMPKGSLEKWLYSHNYCLDIIQRVNIMIDVASALEYLHHGYPSPV 850

Query: 154 ---------------------------LLKEDQSLTQIQTLATISYMAP----------- 175
                                      LL E++S  Q +TLATI YMAP           
Sbjct: 851 VHCDLKPSNVLLDEDMVAHVCDFGIAKLLGENESFAQTRTLATIGYMAPEYGLDGLVSTK 910

Query: 176 -DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT 234
            D Y+FGIM+ME  + K+PT + F GEM+LK  V + LP+SV+ +V +N+L+R D + + 
Sbjct: 911 IDVYSFGIMLMEMLTRKRPTDEMFEGEMSLKRLVKESLPDSVIDIVDSNMLNRGDGYSVK 970

Query: 235 KEQCMSFVFNLAMECTVESPNQRINAKEM 263
           KE C++ +  LA++C  ESP +R+   E+
Sbjct: 971 KEHCVTSIMELALQCVNESPGERMAMVEI 999

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359485176|ref|XP_002280075.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Vitis vinifera]

 Score =  235 bits (599), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 127/272 (46%), Positives = 165/272 (60%), Gaps = 45/272 (16%)

Query: 34   FSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKI 93
            F E N+I  G  G +++  + DG  V VK FNL++ GAFK+ D EC +M+ I+H+NL+KI
Sbjct: 878  FGEDNMIGTGSLGMVHRGVLSDGSIVAVKVFNLEFQGAFKSFDAECEIMRNIQHRNLVKI 937

Query: 94   ISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLH------- 146
            ISSCS  +FKAL+LE MP+GSL K L + NY L+  QRL+IMIDVASA+EYLH       
Sbjct: 938  ISSCSILNFKALVLEYMPNGSLEKWLYSHNYCLNLVQRLNIMIDVASALEYLHHDFSVNP 997

Query: 147  -----------------------FGHSTHLLLKEDQSLTQIQTLATISYMAP-------- 175
                                   FG S   LL E +S+ Q +TL TI YMAP        
Sbjct: 998  VVHCDLKPNNVLLDEEMVARLGDFGISK--LLTETESMEQTRTLGTIGYMAPEYGSEGIV 1055

Query: 176  ----DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEH 231
                D Y++GIM+METF+ KKPT + F GE+TL+ WV   L   VM+VV  NL+ RED+H
Sbjct: 1056 STRGDVYSYGIMMMETFARKKPTDEMFGGEVTLRSWVES-LAGRVMEVVDGNLVRREDQH 1114

Query: 232  FMTKEQCMSFVFNLAMECTVESPNQRINAKEM 263
            F  KE C+  +  LA+ECT ESP  RI+ KE+
Sbjct: 1115 FGIKESCLRSIMALALECTTESPRDRIDMKEV 1146

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359485453|ref|XP_003633276.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Vitis vinifera]

 Score =  232 bits (592), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 125/269 (46%), Positives = 166/269 (61%), Gaps = 40/269 (14%)

Query: 34   FSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKI 93
            F E NLI +G  G +YK  + DG+ V VK FNL+  GAFK+ +VEC +M+ IRH+NL KI
Sbjct: 918  FGEDNLIGKGSLGMVYKGVLSDGLIVAVKVFNLELQGAFKSFEVECEVMRNIRHRNLAKI 977

Query: 94   ISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHS--- 150
            ISSCS  DFKAL+LE MP+GSL K L + NY LDF QRL IMIDVAS +EYLH  +S   
Sbjct: 978  ISSCSNLDFKALVLEYMPNGSLEKWLYSHNYYLDFVQRLKIMIDVASGLEYLHHYYSNPV 1037

Query: 151  -------THLLLKED-----------------QSLTQIQTLATISYMAP----------- 175
                   +++LL +D                 + + + +TL T+ YMAP           
Sbjct: 1038 VHCDLKPSNVLLDDDMVAHISDFGIAKLLMGSEFMKRTKTLGTVGYMAPEYGSEGIVSTK 1097

Query: 176  -DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT 234
             D Y++GI++METF  KKPT + F  E+TLK WV     N++M+V+ ANLL+ EDE F  
Sbjct: 1098 GDIYSYGILLMETFVRKKPTDEMFVEELTLKSWVESST-NNIMEVIDANLLTEEDESFAL 1156

Query: 235  KEQCMSFVFNLAMECTVESPNQRINAKEM 263
            K  C S +  LA++CTVE P +RIN K++
Sbjct: 1157 KRACFSSIMTLALDCTVEPPEKRINTKDV 1185

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359485451|ref|XP_002276944.2| PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2-like [Vitis vinifera]

 Score =  232 bits (591), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 123/271 (45%), Positives = 166/271 (61%), Gaps = 44/271 (16%)

Query: 34   FSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKI 93
            F E NLI +G    +YK  + +G+ V VK FNL++ GAF++ D EC +M+ IRH+NL+KI
Sbjct: 1174 FGEDNLIGKGSLSMVYKGVLSNGLTVAVKVFNLEFQGAFRSFDSECEVMQSIRHRNLVKI 1233

Query: 94   ISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLH------- 146
            I+ CS  DFKAL+LE MP GSL K L + NY LD  QRL+IMIDVASA+EYLH       
Sbjct: 1234 ITCCSNLDFKALVLEYMPKGSLDKWLYSHNYFLDLIQRLNIMIDVASALEYLHHDCPSLV 1293

Query: 147  ----------------------FGHSTHLLLKEDQSLTQIQTLATISYMAP--------- 175
                                  FG +   LL E +S+ Q +TL TI YMAP         
Sbjct: 1294 VHCDLKPNNILLDDDMVAHVGDFGIAR--LLTETESMQQTKTLGTIGYMAPEYGSDGIVS 1351

Query: 176  ---DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHF 232
               D +++GIM+ME F+ KKP  + F+G++TLK WV   L +S+++VV ANLL REDE F
Sbjct: 1352 TKGDVFSYGIMLMEVFARKKPMDEMFNGDLTLKSWVES-LADSMIEVVDANLLRREDEDF 1410

Query: 233  MTKEQCMSFVFNLAMECTVESPNQRINAKEM 263
             TK  C+S +  LA+ CT +SP +RI+ K++
Sbjct: 1411 ATKLSCLSSIMALALACTTDSPEERIDMKDV 1441

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302143440|emb|CBI22001.3| unnamed protein product [Vitis vinifera]

 Score =  231 bits (590), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 123/271 (45%), Positives = 166/271 (61%), Gaps = 44/271 (16%)

Query: 34  FSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKI 93
           F E NLI +G    +YK  + +G+ V VK FNL++ GAF++ D EC +M+ IRH+NL+KI
Sbjct: 649 FGEDNLIGKGSLSMVYKGVLSNGLTVAVKVFNLEFQGAFRSFDSECEVMQSIRHRNLVKI 708

Query: 94  ISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLH------- 146
           I+ CS  DFKAL+LE MP GSL K L + NY LD  QRL+IMIDVASA+EYLH       
Sbjct: 709 ITCCSNLDFKALVLEYMPKGSLDKWLYSHNYFLDLIQRLNIMIDVASALEYLHHDCPSLV 768

Query: 147 ----------------------FGHSTHLLLKEDQSLTQIQTLATISYMAP--------- 175
                                 FG +   LL E +S+ Q +TL TI YMAP         
Sbjct: 769 VHCDLKPNNILLDDDMVAHVGDFGIAR--LLTETESMQQTKTLGTIGYMAPEYGSDGIVS 826

Query: 176 ---DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHF 232
              D +++GIM+ME F+ KKP  + F+G++TLK WV   L +S+++VV ANLL REDE F
Sbjct: 827 TKGDVFSYGIMLMEVFARKKPMDEMFNGDLTLKSWVES-LADSMIEVVDANLLRREDEDF 885

Query: 233 MTKEQCMSFVFNLAMECTVESPNQRINAKEM 263
            TK  C+S +  LA+ CT +SP +RI+ K++
Sbjct: 886 ATKLSCLSSIMALALACTTDSPEERIDMKDV 916

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224116832|ref|XP_002317405.1| predicted protein [Populus trichocarpa] gi|222860470|gb|EEE98017.1| predicted protein [Populus trichocarpa]

 Score =  231 bits (588), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 120/269 (44%), Positives = 166/269 (61%), Gaps = 40/269 (14%)

Query: 34   FSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKI 93
            F+E+NL+  G  GS+YK  + DG+ + VK F+LQ  G     D EC +++++RH+NL+KI
Sbjct: 771  FNETNLLGTGSCGSVYKGTLSDGLCIAVKVFHLQLEGELMRFDSECEVLRMLRHRNLVKI 830

Query: 94   ISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHL 153
            ISSC   DFKALILE +PHGSL K L + NY LD  QRL+IMIDVASA+EYLH G +  +
Sbjct: 831  ISSCCNLDFKALILEFIPHGSLEKWLYSHNYYLDILQRLNIMIDVASALEYLHHGCTRPV 890

Query: 154  ---------------------------LLKEDQSLTQIQTLATISYMAP----------- 175
                                       LL E  ++TQ  TLATI YMAP           
Sbjct: 891  VHCDLKPSNVLINEDMVAHVSDFGISRLLGEGDAVTQTLTLATIGYMAPEYGLEGIVSVK 950

Query: 176  -DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT 234
             D Y++GI +METF+ KKPT   F GEM+LK+WV   LP ++ +V+ ANLL  E+EHF+ 
Sbjct: 951  GDVYSYGIFLMETFTRKKPTDDMFGGEMSLKNWVKQSLPKAITEVIDANLLI-EEEHFVA 1009

Query: 235  KEQCMSFVFNLAMECTVESPNQRINAKEM 263
            K+ C++ + NLA+EC+ + P +RI  +++
Sbjct: 1010 KKDCITSILNLALECSADLPGERICMRDV 1038

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359483677|ref|XP_003633000.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2-like [Vitis vinifera]

 Score =  230 bits (586), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 122/268 (45%), Positives = 166/268 (61%), Gaps = 40/268 (14%)

Query: 34   FSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKI 93
            F E NLI +G  G +YK  + +G+ V +K FNL++ GA ++ D EC +M+ IRH+NL++I
Sbjct: 949  FGEDNLIGKGSQGMVYKGVLSNGLTVAIKVFNLEFQGALRSFDSECEVMQGIRHRNLVRI 1008

Query: 94   ISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHST-- 151
            I+ CS  DFKAL+LE MP+GSL K L + NY LD  QRL+IMIDVASA+EYLH   S+  
Sbjct: 1009 ITCCSNLDFKALVLEYMPNGSLEKWLYSHNYFLDLIQRLNIMIDVASALEYLHHDCSSLV 1068

Query: 152  --------HLLLKED-----------------QSLTQIQTLATISYMAP----------- 175
                    ++LL +D                 +S+ Q +TL TI YMAP           
Sbjct: 1069 VHCDLKPNNVLLDDDMVAHVADFGITKLLTKTESMQQTKTLGTIGYMAPEHGSDGIVSTK 1128

Query: 176  -DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT 234
             D Y++GI++ME FS KKP  + F G++TLK WV   L NSV++VV ANLL REDE   T
Sbjct: 1129 SDVYSYGILLMEVFSRKKPMDEMFTGDLTLKTWVES-LSNSVIQVVDANLLRREDEDLAT 1187

Query: 235  KEQCMSFVFNLAMECTVESPNQRINAKE 262
            K  C+S +  LA+ CT +SP +R+N K+
Sbjct: 1188 KLSCLSSIMALALACTTDSPEERLNMKD 1215

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147853795|emb|CAN81714.1| hypothetical protein VITISV_005816 [Vitis vinifera]

 Score =  229 bits (584), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 124/269 (46%), Positives = 166/269 (61%), Gaps = 40/269 (14%)

Query: 34   FSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKI 93
            F E NLI +G  G +YK  + DG+ V VK FNL+  GAFK+ +VEC +M+ IRH+NL KI
Sbjct: 919  FGEENLIGKGSLGMVYKGVLSDGLIVAVKVFNLELHGAFKSFEVECEVMRNIRHRNLAKI 978

Query: 94   ISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHS--- 150
            ISSCS  DFKAL+LE MP+ SL K L + NY LDF QRL IMIDVAS +EYLH  +S   
Sbjct: 979  ISSCSNLDFKALVLEYMPNESLEKWLYSHNYCLDFIQRLKIMIDVASGLEYLHHDYSNPV 1038

Query: 151  -------THLLLKED-----------------QSLTQIQTLATISYMAP----------- 175
                   +++LL +D                 + + + +TL TI YMAP           
Sbjct: 1039 VHCDLKPSNVLLDDDMVAHISDFGIAKLLMGSEFMKRTKTLGTIGYMAPEYGSEGIVSTK 1098

Query: 176  -DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT 234
             DTY++GI++ME F  KKPT + F  E+TLK WV     N++M+V+ ANLL+ EDE F  
Sbjct: 1099 CDTYSYGIILMEIFVRKKPTDEMFVEELTLKSWVES-SANNIMEVIDANLLTEEDESFAL 1157

Query: 235  KEQCMSFVFNLAMECTVESPNQRINAKEM 263
            K+ C S +  LA++CT+E P +RIN K++
Sbjct: 1158 KQACFSSIMTLALDCTIEPPEKRINMKDV 1186

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147776333|emb|CAN72034.1| hypothetical protein VITISV_000078 [Vitis vinifera]

 Score =  228 bits (581), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 120/268 (44%), Positives = 163/268 (60%), Gaps = 40/268 (14%)

Query: 34   FSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKI 93
            F E NLI +G  G +YK  + +G+ V +K FNL++ GA ++ D EC +M+ IRH+NL++I
Sbjct: 925  FGEDNLIGKGSQGMVYKGVLSNGLNVAIKVFNLEFQGALRSFDSECEVMQGIRHRNLVRI 984

Query: 94   ISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHL 153
            I+ CS  DFKAL+LE MP+GSL K L + NY LD  QRL+IMIDVASA+EYLH   S+ +
Sbjct: 985  ITCCSNLDFKALVLEYMPNGSLEKWLYSHNYFLDLIQRLNIMIDVASALEYLHHDCSSLV 1044

Query: 154  ---------------------------LLKEDQSLTQIQTLATISYMAP----------- 175
                                       LL E +S+ Q +TL TI YMAP           
Sbjct: 1045 VHCDLKPSNVLLDDDMVAHVADFGIAKLLTETESMQQTKTLGTIGYMAPEHGSAGIVSTK 1104

Query: 176  -DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT 234
             D Y++GI++ME F+ KKP  + F G++TLK WV   L NSV++VV  NLL REDE   T
Sbjct: 1105 SDVYSYGILLMEVFARKKPMDEMFTGDLTLKTWVES-LSNSVIQVVDVNLLRREDEDLAT 1163

Query: 235  KEQCMSFVFNLAMECTVESPNQRINAKE 262
            K  C+S +  LA+ CT +SP +RI+ K+
Sbjct: 1164 KLSCLSSIMALALACTTDSPKERIDMKD 1191

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	263
TAIR|locus:2149922	1031	EFR "EF-TU receptor" [Arabidop	0.429	0.109	0.417	6e-28
TAIR|locus:2047525	980	AT2G24130 [Arabidopsis thalian	0.418	0.112	0.416	2.6e-26
TAIR|locus:2079142	1010	AT3G47570 [Arabidopsis thalian	0.524	0.136	0.393	5.4e-23
TAIR|locus:2075631	1009	AT3G47090 [Arabidopsis thalian	0.524	0.136	0.387	1.1e-22
TAIR|locus:2079157	1011	AT3G47580 [Arabidopsis thalian	0.524	0.136	0.354	2.6e-21
UNIPROTKB|Q40640	1025	Xa21 "Receptor kinase-like pro	0.429	0.110	0.370	1.7e-19
TAIR|locus:2126540	876	AT4G29990 [Arabidopsis thalian	0.414	0.124	0.360	2e-19
TAIR|locus:2120412	992	BAM3 "BARELY ANY MERISTEM 3" [	0.463	0.122	0.341	2.1e-19
TAIR|locus:2075661	1025	AT3G47110 [Arabidopsis thalian	0.524	0.134	0.380	2.7e-19
TAIR|locus:2095188	928	AT3G23750 [Arabidopsis thalian	0.429	0.121	0.352	1.2e-18

TAIR|locus:2149922 EFR "EF-TU receptor" [Arabidopsis thaliana (taxid:3702)]

 Score = 206 (77.6 bits), Expect = 6.0e-28, Sum P(3) = 6.0e-28
 Identities = 53/127 (41%), Positives = 73/127 (57%)

Query:    34 FSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIK 92
             FS +NLI  G FG+++K  +  +   V VK  NL   GA K+   EC   K IRH+NL+K
Sbjct:   712 FSSTNLIGSGNFGNVFKGLLGPENKLVAVKVLNLLKHGATKSFMAECETFKGIRHRNLVK 771

Query:    93 IISSCSK-----DDFKALILECMPHGSLGKCLSTSNY--ILDFF------QRLHIMIDVA 139
             +I+ CS      +DF+AL+ E MP GSL   L   +   + D        ++L+I IDVA
Sbjct:   772 LITVCSSLDSEGNDFRALVYEFMPKGSLDMWLQLEDLERVNDHSRSLTPAEKLNIAIDVA 831

Query:   140 SAVEYLH 146
             SA+EYLH
Sbjct:   832 SALEYLH 838

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0010204 "defense response signaling pathway, resistance gene-independent" evidence=IMP

GO:0016045 "detection of bacterium" evidence=RCA;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0002764 "immune response-regulating signaling pathway" evidence=IMP

GO:0009626 "plant-type hypersensitive response" evidence=IMP

GO:0019199 "transmembrane receptor protein kinase activity" evidence=TAS

GO:0010359 "regulation of anion channel activity" evidence=IMP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009581 "detection of external stimulus" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031347 "regulation of defense response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

GO:0050776 "regulation of immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2047525 AT2G24130 [Arabidopsis thaliana (taxid:3702)]

 Score = 221 (82.9 bits), Expect = 2.6e-26, Sum P(3) = 2.6e-26
 Identities = 50/120 (41%), Positives = 73/120 (60%)

Query:    34 FSESNLISRGGFGSIYKAKIQDGMEVVVKGFN----LQYGGAFKNLDVECNMMKIIRHQN 89
             F+ S+LI  G FG +YK  +++  +V VK  +    L++ G+FK    EC ++K  RH+N
Sbjct:   661 FNASSLIGSGRFGHVYKGVLRNNTKVAVKVLDPKTALEFSGSFKR---ECQILKRTRHRN 717

Query:    90 LIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYI---LDFFQRLHIMIDVASAVEYLH 146
             LI+II++CSK  F AL+L  MP+GSL + L    Y    LD  Q ++I  DVA  + YLH
Sbjct:   718 LIRIITTCSKPGFNALVLPLMPNGSLERHLYPGEYSSKNLDLIQLVNICSDVAEGIAYLH 777

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2079142 AT3G47570 [Arabidopsis thaliana (taxid:3702)]

 Score = 227 (85.0 bits), Expect = 5.4e-23, Sum P(2) = 5.4e-23
 Identities = 61/155 (39%), Positives = 83/155 (53%)

Query:    34 FSESNLISRGGFGSIYKAKIQDGMEVV-VKGFNLQYGGAFKNLDVECNMMKIIRHQNLIK 92
             FS SN++  G FG++YKA +    +VV VK  N+Q  GA K+   EC  +K IRH+NL+K
Sbjct:   702 FSSSNMVGSGSFGTVYKALLLTEKKVVAVKVLNMQRRGAMKSFMAECESLKDIRHRNLVK 761

Query:    93 IISSCSKDDF-----KALILECMPHGSLGKCLSTSNY--------ILDFFQRLHIMIDVA 139
             ++++CS  DF     +ALI E MP+GSL   L              L   +RL+I IDVA
Sbjct:   762 LLTACSSIDFQGNEFRALIYEFMPNGSLDMWLHPEEVEEIHRPSRTLTLLERLNIAIDVA 821

Query:   140 SAVEYLHFG-HS--THLLLKEDQSLTQIQTLATIS 171
             S ++YLH   H    H  LK    L      A +S
Sbjct:   822 SVLDYLHVHCHEPIAHCDLKPSNVLLDDDLTAHVS 856

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2075631 AT3G47090 [Arabidopsis thaliana (taxid:3702)]

 Score = 231 (86.4 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
 Identities = 60/155 (38%), Positives = 85/155 (54%)

Query:    34 FSESNLISRGGFGSIYKAKIQDGMEVV-VKGFNLQYGGAFKNLDVECNMMKIIRHQNLIK 92
             FS SN++  G FG+++KA +Q   ++V VK  N+Q  GA K+   EC  +K IRH+NL+K
Sbjct:   701 FSSSNIVGSGSFGTVFKALLQTENKIVAVKVLNMQRRGAMKSFMAECESLKDIRHRNLVK 760

Query:    93 IISSCSKDDF-----KALILECMPHGSLGKCLSTSNY--------ILDFFQRLHIMIDVA 139
             ++++C+  DF     +ALI E MP+GSL K L              L   +RL+I IDVA
Sbjct:   761 LLTACASIDFQGNEFRALIYEFMPNGSLDKWLHPEEVEEIHRPSRTLTLLERLNIAIDVA 820

Query:   140 SAVEYLHFG-HS--THLLLKEDQSLTQIQTLATIS 171
             S ++YLH   H    H  LK    L      A +S
Sbjct:   821 SVLDYLHVHCHEPIAHCDLKPSNILLDDDLTAHVS 855

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009507 "chloroplast" evidence=IDA

TAIR|locus:2079157 AT3G47580 [Arabidopsis thaliana (taxid:3702)]

 Score = 215 (80.7 bits), Expect = 2.6e-21, Sum P(2) = 2.6e-21
 Identities = 55/155 (35%), Positives = 84/155 (54%)

Query:    34 FSESNLISRGGFGSIYKAKIQDGMEVV-VKGFNLQYGGAFKNLDVECNMMKIIRHQNLIK 92
             FS SN++  G FG+++KA +    ++V VK  N+Q  GA K+   EC  +K  RH+NL+K
Sbjct:   703 FSSSNMVGSGSFGTVFKALLPTESKIVAVKVLNMQRRGAMKSFMAECESLKDTRHRNLVK 762

Query:    93 IISSCSKDDF-----KALILECMPHGSLGKCLSTSNY--------ILDFFQRLHIMIDVA 139
             ++++C+  DF     +ALI E +P+GS+   L              L   +RL+I+IDVA
Sbjct:   763 LLTACASTDFQGNEFRALIYEYLPNGSVDMWLHPEEVEEIRRPPRTLTLLERLNIVIDVA 822

Query:   140 SAVEYLHFG-HS--THLLLKEDQSLTQIQTLATIS 171
             S ++YLH   H    H  LK    L +    A +S
Sbjct:   823 SVLDYLHVHCHEPIAHCDLKPSNVLLEDDLTAHVS 857

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

UNIPROTKB|Q40640 Xa21 "Receptor kinase-like protein" [Oryza sativa (taxid:4530)]

 Score = 207 (77.9 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
 Identities = 46/124 (37%), Positives = 75/124 (60%)

Query:    34 FSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKI 93
             F+ +NL+  G FGS+YK K+     V VK   L+   A K+   EC  ++ +RH+NL+KI
Sbjct:   708 FAPTNLLGSGSFGSVYKGKLNIQDHVAVKVLKLENPKALKSFTAECEALRNMRHRNLVKI 767

Query:    94 ISSCSK-----DDFKALILECMPHGSLGKCL--STSNYI----LDFFQRLHIMIDVASAV 142
             ++ CS      +DFKA++ + MP+GSL   +   T++      L+  +R+ I++DVA A+
Sbjct:   768 VTICSSIDNRGNDFKAIVYDFMPNGSLEDWIHPETNDQADQRHLNLHRRVTILLDVACAL 827

Query:   143 EYLH 146
             +YLH
Sbjct:   828 DYLH 831

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2126540 AT4G29990 [Arabidopsis thaliana (taxid:3702)]

 Score = 187 (70.9 bits), Expect = 2.0e-19, Sum P(3) = 2.0e-19
 Identities = 40/111 (36%), Positives = 65/111 (58%)

Query:    39 LISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCS 98
             ++ +GGFG +Y   + +G +V VK  + +    +K    E  ++  + H NL  +I  C+
Sbjct:   579 VLGKGGFGKVYHGFL-NGDQVAVKILSEESTQGYKEFRAEVELLMRVHHTNLTSLIGYCN 637

Query:    99 KDDFKALILECMPHGSLGKCLS-TSNYILDFFQRLHIMIDVASAVEYLHFG 148
             +D+  ALI E M +G+LG  LS  S+ IL + +RL I +D A  +EYLH+G
Sbjct:   638 EDNHMALIYEYMANGNLGDYLSGKSSLILSWEERLQISLDAAQGLEYLHYG 688

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2120412 BAM3 "BARELY ANY MERISTEM 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 179 (68.1 bits), Expect = 2.1e-19, Sum P(3) = 2.1e-19
 Identities = 43/126 (34%), Positives = 70/126 (55%)

Query:    36 ESNLISRGGFGSIYKAKIQDGMEVVVKGF-NLQYGGAFKN-LDVECNMMKIIRHQNLIKI 93
             E+++I +GG G +YK  + +G EV VK    +  G +  N L  E   +  IRH+N++++
Sbjct:   712 ENHVIGKGGRGIVYKGVMPNGEEVAVKKLLTITKGSSHDNGLAAEIQTLGRIRHRNIVRL 771

Query:    94 ISSCSKDDFKALILECMPHGSLGKCL-STSNYILDFFQRLHIMIDVASAVEYLHFGHSTH 152
             ++ CS  D   L+ E MP+GSLG+ L   +   L +  RL I ++ A  + YLH   S  
Sbjct:   772 LAFCSNKDVNLLVYEYMPNGSLGEVLHGKAGVFLKWETRLQIALEAAKGLCYLHHDCSP- 830

Query:   153 LLLKED 158
             L++  D
Sbjct:   831 LIIHRD 836

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0010075 "regulation of meristem growth" evidence=IGI;RCA

GO:0048437 "floral organ development" evidence=IGI

GO:0000271 "polysaccharide biosynthetic process" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=RCA

GO:0009855 "determination of bilateral symmetry" evidence=RCA

GO:0009932 "cell tip growth" evidence=RCA

GO:0010014 "meristem initiation" evidence=RCA

GO:0010073 "meristem maintenance" evidence=RCA

GO:0010817 "regulation of hormone levels" evidence=RCA

GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA

GO:0048653 "anther development" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

TAIR|locus:2075661 AT3G47110 [Arabidopsis thaliana (taxid:3702)]

 Score = 210 (79.0 bits), Expect = 2.7e-19, Sum P(2) = 2.7e-19
 Identities = 59/155 (38%), Positives = 82/155 (52%)

Query:    34 FSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIK 92
             FS SNLI  G FG+++K  +      V +K  NL   GA K+   EC  +  IRH+NL+K
Sbjct:   719 FSSSNLIGSGNFGAVFKGFLGSKNKAVAIKVLNLCKRGAAKSFIAECEALGGIRHRNLVK 778

Query:    93 IISSCSK-----DDFKALILECMPHGSLGKCL------STSN--YILDFFQRLHIMIDVA 139
             +++ CS      +DF+AL+ E MP+G+L   L       T N    L  F RL+I IDVA
Sbjct:   779 LVTICSSSDFEGNDFRALVYEFMPNGNLDMWLHPDEIEETGNPSRTLGLFARLNIAIDVA 838

Query:   140 SAVEYLH-FGHS--THLLLKEDQSLTQIQTLATIS 171
             SA+ YLH + H+   H  +K    L      A +S
Sbjct:   839 SALVYLHTYCHNPIAHCDIKPSNILLDKDLTAHVS 873

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2095188 AT3G23750 [Arabidopsis thaliana (taxid:3702)]

 Score = 184 (69.8 bits), Expect = 1.2e-18, Sum P(3) = 1.2e-18
 Identities = 42/119 (35%), Positives = 64/119 (53%)

Query:    34 FSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGG--AFKNLDVECNMMKIIRHQNLI 91
             FSE N++ RGGFG +Y  ++ DG +  VK       G         E  ++  +RH++L+
Sbjct:   578 FSEDNILGRGGFGVVYAGELHDGTKTAVKRMECAAMGNKGMSEFQAEIAVLTKVRHRHLV 637

Query:    92 KIISSCSKDDFKALILECMPHGSLGKCL---STSNYI-LDFFQRLHIMIDVASAVEYLH 146
              ++  C   + + L+ E MP G+LG+ L   S   Y  L + QR+ I +DVA  VEYLH
Sbjct:   638 ALLGYCVNGNERLLVYEYMPQGNLGQHLFEWSELGYSPLTWKQRVSIALDVARGVEYLH 696

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00025217001 SubName- Full=Chromosome chr9 scaffold_33, whole genome shotgun sequence; (2202 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	263
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	5e-21
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	3e-16
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	8e-16
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	1e-15
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	1e-14
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	2e-12
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	3e-11
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	3e-11
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	5e-11
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	9e-11
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	5e-10
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	2e-09
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	2e-09
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	1e-08
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	2e-08
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	9e-08
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	1e-07
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	4e-07
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	1e-06
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	2e-06
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	3e-06
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	3e-06
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	4e-06
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	4e-06
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	4e-06
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	8e-06
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	1e-05
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	1e-05
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	1e-05
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	2e-05
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	2e-05
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	1e-04
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	1e-04
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	1e-04
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	1e-04
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	1e-04
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	2e-04
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	2e-04
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	3e-04
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	3e-04
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	3e-04
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	3e-04
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	4e-04
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	5e-04
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	7e-04
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	7e-04
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	0.001
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	0.002
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	0.003
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	0.003
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	0.003
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	0.003
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	0.003
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	0.004

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 87.7 bits (218), Expect = 5e-21
 Identities = 42/189 (22%), Positives = 74/189 (39%), Gaps = 45/189 (23%)

Query: 40  ISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKN-LDVECNMMKIIRHQNLIKIISSC 97
           +  GGFG++Y A+  + G +V +K    +   +    L  E  ++K + H N++K+    
Sbjct: 1   LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF 60

Query: 98  SKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLH----------- 146
             ++   L++E    GSL   L  +   L   + L I++ +   +EYLH           
Sbjct: 61  EDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKP 120

Query: 147 ----------------FGHSTHLLLKEDQSLTQIQTLATISYMAP-------------DT 177
                           FG S  L   +    T + T A   YMAP             D 
Sbjct: 121 ENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPA---YMAPEVLLGKGYYSEKSDI 177

Query: 178 YNFGIMIME 186
           ++ G+++ E
Sbjct: 178 WSLGVILYE 186

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 75.8 bits (187), Expect = 3e-16
 Identities = 56/265 (21%), Positives = 97/265 (36%), Gaps = 60/265 (22%)

Query: 40  ISRGGFGSIYKAK-IQDGMEVVVKGFNLQ--YGGAFKNLDVECNMMKIIRHQNLIKIISS 96
           +  G FG++YKAK    G  V VK    +       +    E  +++ + H N++++I +
Sbjct: 7   LGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVRLIDA 66

Query: 97  CSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLH---------- 146
               D   L++E    G L   LS     L   +   I + +   +EYLH          
Sbjct: 67  FEDKDHLYLVMEYCEGGDLFDYLSRGG-PLSEDEAKKIALQILRGLEYLHSNGIIHRDLK 125

Query: 147 ----------------FGHSTHLLLKEDQSLTQIQTLATISYMAP-------------DT 177
                           FG +   LLK   SLT      T  YMAP             D 
Sbjct: 126 PENILLDENGVVKIADFGLAK-KLLKSSSSLTTFV--GTPWYMAPEVLLGGNGYGPKVDV 182

Query: 178 YNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQ 237
           ++ G+++ E  +GK P   F    +  +  +       + +++   L   E +     E+
Sbjct: 183 WSLGVILYELLTGKPP---FSGENILDQLQL-------IRRILGPPLEFDEPKWSSGSEE 232

Query: 238 CMSFVFNLAMECTVESPNQRINAKE 262
               +      C  + P++R  A+E
Sbjct: 233 AKDLIKK----CLNKDPSKRPTAEE 253

Length = 260

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 74.5 bits (184), Expect = 8e-16
 Identities = 53/261 (20%), Positives = 94/261 (36%), Gaps = 54/261 (20%)

Query: 38  NLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYG-GAFKNLDVECNMMKIIRHQNLIKIIS 95
             +  G FG +Y A+  + G  V +K    +      + +  E  ++K ++H N++++  
Sbjct: 5   EKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIVRLYD 64

Query: 96  SCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTH--- 152
               +D   L++E    G L   L      L   +    +  + SA+EYLH     H   
Sbjct: 65  VFEDEDKLYLVMEYCEGGDLFDLLK-KRGRLSEDEARFYLRQILSALEYLHSKGIVHRDL 123

Query: 153 ----LLLKED--------------QSLTQIQTLA-TISYMAP------------DTYNFG 181
               +LL ED                  ++ T   T  YMAP            D ++ G
Sbjct: 124 KPENILLDEDGHVKLADFGLARQLDPGEKLTTFVGTPEYMAPEVLLGKGYGKAVDIWSLG 183

Query: 182 IMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSF 241
           +++ E  +GK P    F G+  L      +             +S E +  + K      
Sbjct: 184 VILYELLTGKPP----FPGDDQLLELFKKIGKPKPPFPPPEWDISPEAKDLIRK------ 233

Query: 242 VFNLAMECTVESPNQRINAKE 262
                    V+ P +R+ A+E
Sbjct: 234 -------LLVKDPEKRLTAEE 247

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 74.1 bits (183), Expect = 1e-15
 Identities = 50/261 (19%), Positives = 99/261 (37%), Gaps = 63/261 (24%)

Query: 40  ISRGGFGSIYKAKIQD-----GMEVVVKGFNLQYGG-AFKNLDVECNMMKIIRHQNLIKI 93
           +  G FG +YK K++       +EV VK           +    E  +M+ + H N++K+
Sbjct: 7   LGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNVVKL 66

Query: 94  ISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTH- 152
           +  C++++   +++E M  G L   L  +   L     L   + +A  +EYL   +  H 
Sbjct: 67  LGVCTEEEPLYIVMEYMEGGDLLSYLRKNRPKLSLSDLLSFALQIARGMEYLESKNFIHR 126

Query: 153 -------LL----------------LKEDQSLTQIQTLATISYMAP------------DT 177
                  L+                L +D    +      I +MAP            D 
Sbjct: 127 DLAARNCLVGENLVVKISDFGLSRDLYDDDYYRKRGGKLPIRWMAPESLKEGKFTSKSDV 186

Query: 178 YNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKE 236
           ++FG+++ E F+ G++P     +  M+ +  +          + +   L +         
Sbjct: 187 WSFGVLLWEIFTLGEQP-----YPGMSNEEVLE--------YLKNGYRLPQP-------P 226

Query: 237 QCMSFVFNLAMECTVESPNQR 257
            C   +++L ++C  E P  R
Sbjct: 227 NCPPELYDLMLQCWAEDPEDR 247

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 71.4 bits (176), Expect = 1e-14
 Identities = 51/262 (19%), Positives = 96/262 (36%), Gaps = 64/262 (24%)

Query: 40  ISRGGFGSIYKAKIQDG-----MEVVVKGFNLQYGG-AFKNLDVECNMMKIIRHQNLIKI 93
           +  G FG +YK  ++       +EV VK           +    E  +M+ + H N++K+
Sbjct: 7   LGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNIVKL 66

Query: 94  ISSCSKDDFKALILECMPHGSLGKCL-STSNYILDFFQRLHIMIDVASAVEYLHFGHSTH 152
           +  C++++   +++E MP G L   L       L     L   + +A  +EYL   +  H
Sbjct: 67  LGVCTEEEPLMIVMEYMPGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIH 126

Query: 153 --------LL----------------LKEDQSLTQIQTLATISYMAP------------D 176
                   L+                L +D           I +MAP            D
Sbjct: 127 RDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKVKGGKLPIRWMAPESLKEGKFTSKSD 186

Query: 177 TYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTK 235
            ++FG+++ E F+ G++P     +  M+      ++L      +     L +        
Sbjct: 187 VWSFGVLLWEIFTLGEEP-----YPGMSNA----EVLE----YLKKGYRLPKP------- 226

Query: 236 EQCMSFVFNLAMECTVESPNQR 257
             C   ++ L ++C  E P  R
Sbjct: 227 PNCPPELYKLMLQCWAEDPEDR 248

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 65.2 bits (160), Expect = 2e-12
 Identities = 50/269 (18%), Positives = 95/269 (35%), Gaps = 70/269 (26%)

Query: 42  RGGFGSIYKAKI-----QDGMEVVVKGFNLQYGG----AFKNLDVECNMMKIIRHQNLIK 92
            G FG +YK  +         +V VK             F     E ++MK + H N+++
Sbjct: 9   EGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLE---EASIMKKLSHPNIVR 65

Query: 93  IISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTH 152
           ++  C++ +   ++ E MP G L   L      L     L + + +A  +EYL   +  H
Sbjct: 66  LLGVCTQGEPLYIVTEYMPGGDLLDFLRKHGEKLTLKDLLQMALQIAKGMEYLESKNFVH 125

Query: 153 -------------------------LLLKEDQSLTQIQTLATISYMAP------------ 175
                                     + ++D    +      I +MAP            
Sbjct: 126 RDLAARNCLVTENLVVKISDFGLSRDIYEDDYYRKRGGGKLPIKWMAPESLKDGKFTSKS 185

Query: 176 DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTK 235
           D ++FG+++ E F+          GE         +    V++++       ED + + +
Sbjct: 186 DVWSFGVLLWEIFTL---------GEQPYP----GMSNEEVLELL-------EDGYRLPR 225

Query: 236 -EQCMSFVFNLAMECTVESPNQRINAKEM 263
            E C   ++ L ++C    P  R    E+
Sbjct: 226 PENCPDELYELMLQCWAYDPEDRPTFSEL 254

Length = 258

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 61.8 bits (151), Expect = 3e-11
 Identities = 57/279 (20%), Positives = 99/279 (35%), Gaps = 77/279 (27%)

Query: 38  NLISRGGFGSIYKAKIQDG----MEVVVKGFNLQYGGAFKNLDV---ECNMMKIIRHQNL 90
             +  G FG +YK K++       EV VK   L+   + +       E  +MK + H N+
Sbjct: 1   KKLGEGAFGEVYKGKLKGKDGKTTEVAVK--TLKEDASEEERKDFLKEARVMKKLGHPNV 58

Query: 91  IKIISSCSKDDFKALILECMPHGSL--------GKCLSTSNYILDFFQRLHIMIDVASAV 142
           ++++  C++++   L+LE M  G L            S     L     L   I +A  +
Sbjct: 59  VRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGM 118

Query: 143 EYLH---FGH----------STHLLLK-------EDQSLTQIQTLAT-----ISYMAP-- 175
           EYL    F H             L++K        D          T     I +MAP  
Sbjct: 119 EYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPES 178

Query: 176 ----------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANL 224
                     D ++FG+++ E F+ G  P     +  ++ +          V++ +    
Sbjct: 179 LKDGIFTSKSDVWSFGVLLWEIFTLGATP-----YPGLSNEE---------VLEYLRKG- 223

Query: 225 LSREDEHFMTK-EQCMSFVFNLAMECTVESPNQRINAKE 262
                 + + K E C   ++ L + C    P  R    E
Sbjct: 224 ------YRLPKPEYCPDELYELMLSCWQLDPEDRPTFSE 256

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 62.9 bits (153), Expect = 3e-11
 Identities = 66/266 (24%), Positives = 109/266 (40%), Gaps = 55/266 (20%)

Query: 36  ESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKII 94
           E N+ISRG  G+ YK K I++GM+ VVK  N        +   +   M  ++H N++K+I
Sbjct: 694 EENVISRGKKGASYKGKSIKNGMQFVVKEIN-DVNSIPSSEIAD---MGKLQHPNIVKLI 749

Query: 95  SSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHST--- 151
             C  +    LI E +   +L + L      L + +R  I I +A A+ +LH   S    
Sbjct: 750 GLCRSEKGAYLIHEYIEGKNLSEVLRN----LSWERRRKIAIGIAKALRFLHCRCSPAVV 805

Query: 152 -----------------HLLLKEDQSL-TQIQTLATISYMAPDT------------YNFG 181
                            HL L     L T  +   + +Y+AP+T            Y FG
Sbjct: 806 VGNLSPEKIIIDGKDEPHLRLSLPGLLCTDTKCFISSAYVAPETRETKDITEKSDIYGFG 865

Query: 182 IMIMETFSGKKPTIKFFHGEMTLKHWV-----NDLLPNSVMKVVSANLLSREDEHFMTKE 236
           ++++E  +GK P    F    ++  W      +  L   +   +  ++   ++E      
Sbjct: 866 LILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNE------ 919

Query: 237 QCMSFVFNLAMECTVESPNQRINAKE 262
             +  V NLA+ CT   P  R  A +
Sbjct: 920 --IVEVMNLALHCTATDPTARPCAND 943

Length = 968

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 60.7 bits (148), Expect = 5e-11
 Identities = 50/196 (25%), Positives = 81/196 (41%), Gaps = 35/196 (17%)

Query: 33  LFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLI 91
           LF     I +GGFG +YKA+  + G EV +K   L+     + +  E  ++K  +H N++
Sbjct: 1   LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIV 60

Query: 92  KIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHST 151
           K   S  K D   +++E    GSL   L ++N  L   Q  ++  ++   +EYLH     
Sbjct: 61  KYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGII 120

Query: 152 H-------LLLKED---------------QSLTQIQTLATISYMAP------------DT 177
           H       +LL  D                +  +   + T  +MAP            D 
Sbjct: 121 HRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGKPYDYKADI 180

Query: 178 YNFGIMIMETFSGKKP 193
           ++ GI  +E   GK P
Sbjct: 181 WSLGITAIELAEGKPP 196

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 60.5 bits (147), Expect = 9e-11
 Identities = 64/283 (22%), Positives = 105/283 (37%), Gaps = 80/283 (28%)

Query: 40  ISRGGFGSIYKAKI------QDGMEVVVKGF-NLQYGGAFKNLDVECNMMKIIRHQNLIK 92
           +  G FG ++  +        D   V VK         A K+ + E  ++   +H+N++K
Sbjct: 13  LGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVK 72

Query: 93  IISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFF-------------QRLHIMIDVA 139
               C++ D   ++ E M HG L K L +      F              Q L I + +A
Sbjct: 73  FYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIA 132

Query: 140 SAVEYL---HFGH---STHLLLKEDQSLTQI-------------------QTLATISYMA 174
           S + YL   HF H   +T   L     + +I                    T+  I +M 
Sbjct: 133 SGMVYLASQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMP 192

Query: 175 P------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVV- 220
           P            D ++FG+++ E F+ GK+P             W   L    V++ + 
Sbjct: 193 PESIMYRKFTTESDVWSFGVVLWEIFTYGKQP-------------WY-GLSNEEVIECIT 238

Query: 221 SANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM 263
              LL R          C S V+++ + C    P QRIN K++
Sbjct: 239 QGRLLQR-------PRTCPSEVYDIMLGCWKRDPQQRINIKDI 274

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 58.5 bits (141), Expect = 5e-10
 Identities = 65/284 (22%), Positives = 106/284 (37%), Gaps = 81/284 (28%)

Query: 40  ISRGGFGSIYKAK------IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKI 93
           +  G FG ++ A+       +D M V VK        A K+   E  ++  ++H++++K 
Sbjct: 13  LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 72

Query: 94  ISSCSKDDFKALILECMPHGSLGKCLST---------------SNYILDFFQRLHIMIDV 138
              C   D   ++ E M HG L K L                 +   L   Q LHI   +
Sbjct: 73  YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 132

Query: 139 ASAVEYL---HFGH----------STHLLLK------------EDQSLTQIQTLATISYM 173
           AS + YL   HF H            +LL+K             D       T+  I +M
Sbjct: 133 ASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWM 192

Query: 174 AP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVV 220
            P            D ++FG+++ E F+ GK+P             W   L    V++ +
Sbjct: 193 PPESIMYRKFTTESDVWSFGVILWEIFTYGKQP-------------WFQ-LSNTEVIECI 238

Query: 221 S-ANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM 263
           +   +L R          C   V+++ + C    P QR+N KE+
Sbjct: 239 TQGRVLER-------PRVCPKEVYDIMLGCWQREPQQRLNIKEI 275

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 56.4 bits (137), Expect = 2e-09
 Identities = 56/276 (20%), Positives = 96/276 (34%), Gaps = 79/276 (28%)

Query: 38  NLISRGGFGSIYKAKIQD-GMEVVVKGFNLQYGGA--FKNLDVECNMMKIIRHQNLIKII 94
            L+ RG FGS+Y A  +D G  + VK   L        + L+ E  ++  ++H N+++  
Sbjct: 6   ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYY 65

Query: 95  SSCSKDDFKAL--ILECMPHGSLGKCLSTSNYILDFFQRLHI------MIDVASAVEYLH 146
            S   ++   L   LE +  GSL         +L  F +L           +   + YLH
Sbjct: 66  GSERDEEKNTLNIFLEYVSGGSLSS-------LLKKFGKLPEPVIRKYTRQILEGLAYLH 118

Query: 147 --------------------------FGHSTHLLLKEDQSLTQIQTLA-TISYMAP---- 175
                                     FG +    L + ++     ++  T  +MAP    
Sbjct: 119 SNGIVHRDIKGANILVDSDGVVKLADFGCAKR--LGDIETGEGTGSVRGTPYWMAPEVIR 176

Query: 176 --------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVM-KVVSANLLS 226
                   D ++ G  ++E  +GK P             W     P + + K+ S+    
Sbjct: 177 GEEYGRAADIWSLGCTVIEMATGKPP-------------WSELGNPMAALYKIGSSGEPP 223

Query: 227 REDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKE 262
              EH    E+   F+     +C    P +R  A E
Sbjct: 224 EIPEHL--SEEAKDFL----RKCLRRDPKKRPTADE 253

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 56.5 bits (137), Expect = 2e-09
 Identities = 63/278 (22%), Positives = 109/278 (39%), Gaps = 79/278 (28%)

Query: 34  FSESNLISRGGFGSIYKA-KIQDGMEVVVKGFNLQ--YGGAFKNLDVECNMMKIIRHQNL 90
           +   +LI RG FG +YK   ++ G  V +K  +L+     A K++  E +++K ++H N+
Sbjct: 2   YQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNI 61

Query: 91  IKIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHI--MIDVASAVEYLH-- 146
           +K I S    D   +ILE   +GSL + +        F + L    +  V   + YLH  
Sbjct: 62  VKYIGSIETSDSLYIILEYAENGSLRQIIKKFG---PFPESLVAVYVYQVLQGLAYLHEQ 118

Query: 147 ------------------------FGHSTHLLLKEDQSLTQIQTLATISYMAP------- 175
                                   FG +T L    D S      + T  +MAP       
Sbjct: 119 GVIHRDIKAANILTTKDGVVKLADFGVATKL---NDVSKDDASVVGTPYWMAPEVIEMSG 175

Query: 176 -----DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVM-KVVSANLLSRED 229
                D ++ G  ++E  +G  P    ++          DL P + + ++V       +D
Sbjct: 176 ASTASDIWSLGCTVIELLTGNPP----YY----------DLNPMAALFRIV-------QD 214

Query: 230 EHF----MTKEQCMSFVFNLAMECTVESPNQRINAKEM 263
           +H         +   F+    M+C  + PN R  AK++
Sbjct: 215 DHPPLPEGISPELKDFL----MQCFQKDPNLRPTAKQL 248

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 54.2 bits (130), Expect = 1e-08
 Identities = 62/282 (21%), Positives = 105/282 (37%), Gaps = 78/282 (27%)

Query: 40  ISRGGFGSIYKAKI------QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKI 93
           +  G FG ++ A+       QD M V VK        A ++   E  ++ +++HQ++++ 
Sbjct: 13  LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRF 72

Query: 94  ISSCSKDDFKALILECMPHGSLGKCLSTSN---YILD-----------FFQRLHIMIDVA 139
              C++     ++ E M HG L + L +      IL              Q L I   +A
Sbjct: 73  YGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIA 132

Query: 140 SAVEY---LHFGH----------STHLLLK------------EDQSLTQIQTLATISYMA 174
           S + Y   LHF H             L++K             D      +T+  I +M 
Sbjct: 133 SGMVYLASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMP 192

Query: 175 P------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVS 221
           P            D ++FG+++ E F+ GK+P             W    L N+  + + 
Sbjct: 193 PESILYRKFTTESDIWSFGVVLWEIFTYGKQP-------------WYQ--LSNT--EAIE 235

Query: 222 ANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM 263
                RE E   T   C   V+ +   C    P QR+  K++
Sbjct: 236 CITQGRELERPRT---CPPEVYAIMQGCWQREPQQRMVIKDI 274

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 53.2 bits (128), Expect = 2e-08
 Identities = 47/190 (24%), Positives = 77/190 (40%), Gaps = 38/190 (20%)

Query: 39  LISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFK-NLDVECNMMKIIRHQNLIKIISSC 97
            I +G FG +YK  ++   EV VK          K     E  ++K   H N++K+I  C
Sbjct: 2   KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVC 61

Query: 98  SKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTH----- 152
            +     +++E +P GSL   L      L   + L + +D A+ +EYL   +  H     
Sbjct: 62  VQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAA 121

Query: 153 --LLLKEDQSL------------TQIQTLAT------ISYMAP------------DTYNF 180
              L+ E+  L              I T++       I + AP            D +++
Sbjct: 122 RNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSY 181

Query: 181 GIMIMETFSG 190
           GI++ ETFS 
Sbjct: 182 GILLWETFSL 191

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 51.6 bits (124), Expect = 9e-08
 Identities = 51/277 (18%), Positives = 91/277 (32%), Gaps = 71/277 (25%)

Query: 37  SNLISRGGFGSIYKAKI-----QDGMEVVVKGFNLQYGGAFKN-LDVECNMMKIIRHQNL 90
              +  G FG +   +        G +V VK  N       ++  + E  +++ + H+N+
Sbjct: 9   IKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENI 68

Query: 91  IKIISSCSKDDFKA--LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFG 148
           +K    C K   ++  LI+E +P GSL   L      ++  + L     +   ++YL   
Sbjct: 69  VKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQ 128

Query: 149 HSTH--------LLLKEDQ------SLTQIQTL------------ATISYMAP------- 175
              H        L+  ED        L ++               + I + AP       
Sbjct: 129 RYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSK 188

Query: 176 -----DTYNFGIMIMETFSGKKPT----------IKFFHGEMTLKHWVNDLLPNSVMKVV 220
                D ++FG+ + E F+   P+          I    G+M +   +  L         
Sbjct: 189 FSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGE----- 243

Query: 221 SANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQR 257
               L R          C   V++L   C    P  R
Sbjct: 244 ---RLPRPP-------SCPDEVYDLMKLCWEAEPQDR 270

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 51.1 bits (123), Expect = 1e-07
 Identities = 46/201 (22%), Positives = 78/201 (38%), Gaps = 37/201 (18%)

Query: 33  LFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLI 91
           L+     I  G  G +YKA     G EV +K   L+     + +  E  +MK  +H N++
Sbjct: 20  LYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLR-KQNKELIINEILIMKDCKHPNIV 78

Query: 92  KIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHST 151
               S    D   +++E M  GSL   ++ +   ++  Q  ++  +V   +EYLH  +  
Sbjct: 79  DYYDSYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVI 138

Query: 152 HLLLKEDQSL---------------TQIQTLA--------TISYMAP------------D 176
           H  +K D  L                Q+            T  +MAP            D
Sbjct: 139 HRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVD 198

Query: 177 TYNFGIMIMETFSGKKPTIKF 197
            ++ GIM +E   G+ P ++ 
Sbjct: 199 IWSLGIMCIEMAEGEPPYLRE 219

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 49.3 bits (118), Expect = 4e-07
 Identities = 58/259 (22%), Positives = 103/259 (39%), Gaps = 56/259 (21%)

Query: 39  LISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCS 98
            I +G FG +     + G +V VK        A   L  E ++M  +RH NL++++    
Sbjct: 13  TIGKGEFGDVMLGDYR-GQKVAVKCLKDDSTAAQAFLA-EASVMTTLRHPNLVQLLGVVL 70

Query: 99  KDDFKALILECMPHGSLGKCL-STSNYILDFFQRLHIMIDVASAVEYL---HFGH----S 150
           + +   ++ E M  GSL   L S    ++   Q+L   +DV   +EYL   +F H    +
Sbjct: 71  QGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAA 130

Query: 151 THLLLKED-----------QSLTQIQTLAT--ISYMAP------------DTYNFGIMIM 185
            ++L+ ED           +  +Q Q      + + AP            D ++FGI++ 
Sbjct: 131 RNVLVSEDLVAKVSDFGLAKEASQGQDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLW 190

Query: 186 ETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFN 244
           E +S G+ P     +  + LK  V  +     M+                 E C   V+ 
Sbjct: 191 EIYSFGRVP-----YPRIPLKDVVPHVEKGYRME---------------APEGCPPEVYK 230

Query: 245 LAMECTVESPNQRINAKEM 263
           +  +C    P +R   K++
Sbjct: 231 VMKDCWELDPAKRPTFKQL 249

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 47.7 bits (113), Expect = 1e-06
 Identities = 42/188 (22%), Positives = 72/188 (38%), Gaps = 37/188 (19%)

Query: 39  LISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFK-NLDVECNMMKIIRHQNLIKIISSC 97
           L+ +G FG ++K  ++D   V VK          K     E  ++K   H N++K+I  C
Sbjct: 2   LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVC 61

Query: 98  SKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLL-- 155
           ++     +++E +P G     L      L   Q +   +D A+ + YL   +  H  L  
Sbjct: 62  TQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAA 121

Query: 156 --------------------KEDQSLTQIQTLAT--ISYMAP------------DTYNFG 181
                               +ED  +     L    I + AP            D +++G
Sbjct: 122 RNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYG 181

Query: 182 IMIMETFS 189
           I++ ETFS
Sbjct: 182 ILLWETFS 189

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 47.4 bits (113), Expect = 2e-06
 Identities = 62/278 (22%), Positives = 106/278 (38%), Gaps = 86/278 (30%)

Query: 43  GGFGSIYKAKI--QDGME----VVVKGFNLQYGGA----FKNLDVECNMMKIIRHQNLIK 92
           G FG +YK ++   +       V +K             F+    E  +M  ++H N++ 
Sbjct: 16  GAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQ---EAELMSDLQHPNIVC 72

Query: 93  IISSCSKDDFKALILECMPHGSLGKCL---------------STSNYILDFFQRLHIMID 137
           ++  C+K+    ++ E + HG L + L                T    LD    LHI I 
Sbjct: 73  LLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQ 132

Query: 138 VASAVEYL---HFGH----------STHLLLK-EDQSLT-----------QIQTLATISY 172
           +A+ +EYL   HF H             L +K  D  L+           Q ++L  + +
Sbjct: 133 IAAGMEYLSSHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRW 192

Query: 173 MAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKV 219
           M P            D ++FG+++ E FS G +P   F + E              V+++
Sbjct: 193 MPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQE--------------VIEM 238

Query: 220 VSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQR 257
           +      R  +     E C + V+ L +EC  E P +R
Sbjct: 239 I------RSRQLLPCPEDCPARVYALMIECWNEIPARR 270

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 46.8 bits (111), Expect = 3e-06
 Identities = 34/131 (25%), Positives = 54/131 (41%), Gaps = 21/131 (16%)

Query: 38  NLISRGGFGSIYKAKIQD-------GMEVVVKGFNLQYGGA---FKNLDVECNMMKIIRH 87
           N +  G FG +Y+    D        + V VK   L+ G      K    E ++M    H
Sbjct: 1   NFLGSGAFGEVYEGTATDILGPGSGPIRVAVK--TLRKGATDQEKKEFLKEAHLMSNFNH 58

Query: 88  QNLIKIISSCSKDDFKALILECMPHGSL------GKCLSTSNYILDFFQRLHIMIDVASA 141
            N++K++  C  ++ + +I+E M  G L       +       +L   + L I +DVA  
Sbjct: 59  PNIVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKG 118

Query: 142 VEYL---HFGH 149
             YL   HF H
Sbjct: 119 CVYLEQMHFIH 129

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 47.4 bits (111), Expect = 3e-06
 Identities = 48/278 (17%), Positives = 85/278 (30%), Gaps = 67/278 (24%)

Query: 39  LISRGGFGSIYKAKIQDGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIRHQ-NLIKII 94
            +  G FG +Y A+  D   V +K    +        +    E  ++  + H  N++K+ 
Sbjct: 7   KLGEGSFGEVYLAR--DRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLY 64

Query: 95  SSCSKDDFKALILECMPHGSLGK--CLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTH 152
                +    L++E +  GSL            L   + L I+  + SA+EYLH     H
Sbjct: 65  DFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIH 124

Query: 153 LLLKEDQSLTQIQT------------------------------LATISYMAP------- 175
             +K +  L                                   + T  YMAP       
Sbjct: 125 RDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLS 184

Query: 176 --------DTYNFGIMIMETFSGKKPTIKF---FHGEMTLKHWVNDLLPNSVMKVVSANL 224
                   D ++ GI + E  +G  P            TLK  +    P+    +  +N 
Sbjct: 185 LAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNP 244

Query: 225 LSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKE 262
                              +L  +   + P  R+++  
Sbjct: 245 ELISKA-----------ASDLLKKLLAKDPKNRLSSSS 271

Length = 384

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 47.0 bits (111), Expect = 4e-06
 Identities = 60/278 (21%), Positives = 103/278 (37%), Gaps = 76/278 (27%)

Query: 40  ISRGGFGSIYKAKI------QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKI 93
           +  G FG ++ A+       QD + V VK        A K+   E  ++  ++H++++K 
Sbjct: 13  LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 72

Query: 94  ISSCSKDDFKALILECMPHGSLGKCLSTSN------------YILDFFQRLHIMIDVASA 141
              C + D   ++ E M HG L K L                  L   Q LHI   +A+ 
Sbjct: 73  YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAG 132

Query: 142 VEYL---HFGH---STHLLLKEDQSLTQI-------------------QTLATISYMAP- 175
           + YL   HF H   +T   L  +  L +I                    T+  I +M P 
Sbjct: 133 MVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPE 192

Query: 176 -----------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSAN 223
                      D ++ G+++ E F+ GK+P  +  + E+             +  +    
Sbjct: 193 SIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEV-------------IECITQGR 239

Query: 224 LLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAK 261
           +L R          C   V++L + C    P+ R+N K
Sbjct: 240 VLQR-------PRTCPKEVYDLMLGCWQREPHMRLNIK 270

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 46.7 bits (111), Expect = 4e-06
 Identities = 44/212 (20%), Positives = 88/212 (41%), Gaps = 54/212 (25%)

Query: 34  FSESN---LISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQN 89
           + E+    ++ +G +G +Y A+ +   + + +K    +     + L  E  +   ++H+N
Sbjct: 7   YDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRN 66

Query: 90  LIKIISSCSKDDFKALILECMPHGSLGKCL-----------STSNY----ILDFFQRLH- 133
           +++ + S S++ F  + +E +P GSL   L            T  +    IL+  + LH 
Sbjct: 67  IVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHD 126

Query: 134 ------------IMIDVASAVEYLH-FGHSTHL--LLKEDQSLTQIQTLATISYMAP--- 175
                       ++++  S V  +  FG S  L  +    ++ T      T+ YMAP   
Sbjct: 127 NQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCTETFT-----GTLQYMAPEVI 181

Query: 176 -----------DTYNFGIMIMETFSGKKPTIK 196
                      D ++ G  I+E  +GK P I+
Sbjct: 182 DKGPRGYGAPADIWSLGCTIVEMATGKPPFIE 213

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 46.5 bits (110), Expect = 4e-06
 Identities = 66/284 (23%), Positives = 112/284 (39%), Gaps = 88/284 (30%)

Query: 44  GFGSIYKAKIQ-DGME----VVVKGF----NLQYGGAFKNLDVECNMMKIIRHQNLIKII 94
            FG IYK  +   GM+    V +K      N Q  G F+    E ++M  + H N++ ++
Sbjct: 17  AFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQ---EASLMAELHHPNIVCLL 73

Query: 95  SSCSKDDFKALILECM-------------PHGSLGKCLS----TSNYILDFFQRLHIMID 137
              +++    ++ E +             PH  +G C S    T    LD    LHI I 
Sbjct: 74  GVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVG-CSSDEDGTVKSSLDHGDFLHIAIQ 132

Query: 138 VASAVEYL--HF-------------GHSTHLLLKE----------DQSLTQIQTLATISY 172
           +A+ +EYL  HF             G   H+ + +          D    Q ++L  I +
Sbjct: 133 IAAGMEYLSSHFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRW 192

Query: 173 MAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKV 219
           M P            D ++FG+++ E FS G +P   F + E              V+++
Sbjct: 193 MPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQE--------------VIEM 238

Query: 220 VSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM 263
           V      R+ +     E C   +++L  EC  E P++R   K++
Sbjct: 239 V------RKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDI 276

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 45.7 bits (108), Expect = 8e-06
 Identities = 45/190 (23%), Positives = 77/190 (40%), Gaps = 38/190 (20%)

Query: 40  ISRGGFGSIYKA-KIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCS 98
           I +G  G++Y A  +  G EV +K  NLQ     + +  E  +M+  +H N++  + S  
Sbjct: 27  IGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYL 86

Query: 99  KDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKED 158
             D   +++E +  GSL   ++ +   +D  Q   +  +   A+E+LH     H  +K D
Sbjct: 87  VGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSD 144

Query: 159 Q---------SLTQIQTLATIS--------------YMAP------------DTYNFGIM 183
                      LT     A I+              +MAP            D ++ GIM
Sbjct: 145 NILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIM 204

Query: 184 IMETFSGKKP 193
            +E   G+ P
Sbjct: 205 AIEMVEGEPP 214

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 45.1 bits (107), Expect = 1e-05
 Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 24/122 (19%)

Query: 43  GGFGSIYKAKIQDGMEVVVKGFNLQYGGA-FKNLDVECNMMKIIRHQNLIKIISSCSKDD 101
           G FG +++    +   V VK   L+ G    K+   E  +MK +RH  LI++ + C+ ++
Sbjct: 17  GQFGEVWEGLWNNTTPVAVK--TLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEE 74

Query: 102 FKALILECMPHGSLGKCLSTSNYILDFFQR-------LHIMID----VASAVEYLHFGHS 150
              ++ E M +GSL          L++ Q        L  +ID    VAS + YL   + 
Sbjct: 75  PIYIVTELMKYGSL----------LEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNY 124

Query: 151 TH 152
            H
Sbjct: 125 IH 126

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 44.8 bits (107), Expect = 1e-05
 Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 6/115 (5%)

Query: 38  NLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDV--ECNMMKIIRHQNLIKII 94
             I +G FG +Y  +   DG   V+K  +L      +  D   E  ++K + H N+IK  
Sbjct: 6   KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYY 65

Query: 95  SSCSKDDFKALILECMPHGSLGKCLSTSNYILDFF---QRLHIMIDVASAVEYLH 146
            S  +     +++E    G L + +         F   Q L   + +  A++YLH
Sbjct: 66  ESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLH 120

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 45.1 bits (107), Expect = 1e-05
 Identities = 52/272 (19%), Positives = 98/272 (36%), Gaps = 73/272 (26%)

Query: 39  LISRGGFGSIYKA----KIQDGMEVVVKGFNLQYGGAFKNLDV-ECNMMKIIRHQNLIKI 93
            I  G FG +Y+        + + V VK        + +   + E  +M+   H +++K+
Sbjct: 13  CIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKL 72

Query: 94  ISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLH------- 146
           I   + ++   +++E  P G L   L  + Y LD    +     +++A+ YL        
Sbjct: 73  IGVIT-ENPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHR 131

Query: 147 -------------------FGHSTHLLLKEDQSL-TQIQTLATISYMAPDTYN------- 179
                              FG S +L   ED+S     +    I +MAP++ N       
Sbjct: 132 DIAARNVLVSSPDCVKLGDFGLSRYL---EDESYYKASKGKLPIKWMAPESINFRRFTSA 188

Query: 180 -----FGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNS--VMKVVSANLLSREDEH 231
                FG+ + E    G KP    F G           + N+  + ++ +   L      
Sbjct: 189 SDVWMFGVCMWEILMLGVKP----FQG-----------VKNNDVIGRIENGERLPM---- 229

Query: 232 FMTKEQCMSFVFNLAMECTVESPNQRINAKEM 263
                 C   +++L  +C    P++R    E+
Sbjct: 230 ---PPNCPPTLYSLMTKCWAYDPSKRPRFTEL 258

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 44.6 bits (105), Expect = 2e-05
 Identities = 53/267 (19%), Positives = 91/267 (34%), Gaps = 74/267 (27%)

Query: 40  ISRGGFGSIYKAKIQ-DGMEVVVKGFNLQYGGAFK-NLDVECNMMKIIRHQNLIKIISSC 97
           I RG FG ++  +++ D   V VK          K     E  ++K   H N++++I  C
Sbjct: 3   IGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 62

Query: 98  SKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKE 157
           ++     +++E +  G     L T    L   + + ++ + A+ +EYL   H  H  L  
Sbjct: 63  TQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAA 122

Query: 158 DQSLTQIQTLATIS-------------------------YMAP------------DTYNF 180
              L   + +  IS                         + AP            D ++F
Sbjct: 123 RNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSF 182

Query: 181 GIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTK---- 235
           GI++ E FS G  P                            ANL +++    + +    
Sbjct: 183 GILLWEAFSLGAVPY---------------------------ANLSNQQTREAIEQGVRL 215

Query: 236 ---EQCMSFVFNLAMECTVESPNQRIN 259
              E C   V+ L   C    P QR +
Sbjct: 216 PCPELCPDAVYRLMERCWEYDPGQRPS 242

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 44.3 bits (105), Expect = 2e-05
 Identities = 48/252 (19%), Positives = 87/252 (34%), Gaps = 57/252 (22%)

Query: 43  GGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDF 102
           G FG +++   ++ + V +K          ++   E   +K +RH++LI + + CS  + 
Sbjct: 17  GYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEP 76

Query: 103 KALILECMPHGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHSTH--------- 152
             +I E M  GSL   L +    +L     + +   VA  + YL   +S H         
Sbjct: 77  VYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNIL 136

Query: 153 ---------------LLLKEDQSLTQIQTLATISYMAP------------DTYNFGIMIM 185
                           L+KED  L+         + AP            D ++FGI++ 
Sbjct: 137 VGEDLVCKVADFGLARLIKEDVYLSS-DKKIPYKWTAPEAASHGTFSTKSDVWSFGILLY 195

Query: 186 ETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNL 245
           E F+         +G++          P   M                   +C   ++ +
Sbjct: 196 EMFT---------YGQV----------PYPGMNNHEVYDQITAGYRMPCPAKCPQEIYKI 236

Query: 246 AMECTVESPNQR 257
            +EC    P  R
Sbjct: 237 MLECWAAEPEDR 248

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 42.5 bits (100), Expect = 1e-04
 Identities = 27/108 (25%), Positives = 51/108 (47%), Gaps = 7/108 (6%)

Query: 78  ECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCL-STSNYILDFFQRLHIMI 136
           E  +MK I+H NL++++  C+++    +I E M +G+L   L   +   ++    L++  
Sbjct: 52  EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 111

Query: 137 DVASAVEYLHFGHSTHL------LLKEDQSLTQIQTLATISYMAPDTY 178
            ++SA+EYL   +  H        L  +  L ++        M  DTY
Sbjct: 112 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 159

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 42.2 bits (99), Expect = 1e-04
 Identities = 19/94 (20%), Positives = 48/94 (51%), Gaps = 6/94 (6%)

Query: 33  LFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGA------FKNLDVECNMMKIIR 86
            +++  ++ +G +G++Y      G  + VK   L           ++ L  E +++K ++
Sbjct: 1   EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLK 60

Query: 87  HQNLIKIISSCSKDDFKALILECMPHGSLGKCLS 120
           H N+++ + +C  D+  ++ +E +P GS+   L+
Sbjct: 61  HVNIVQYLGTCLDDNTISIFMEFVPGGSISSILN 94

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 42.2 bits (99), Expect = 1e-04
 Identities = 54/284 (19%), Positives = 94/284 (33%), Gaps = 88/284 (30%)

Query: 39  LISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDV------ECNMMKIIRHQNLI 91
            +  G F S Y+A+ ++ G  + VK        + +  +V      E  +M  + H ++I
Sbjct: 7   QLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHII 66

Query: 92  KIISSCSKDDFKALILECMPHGSLGKCLS---------TSNYILDFFQRLHIMIDVASAV 142
           +++ +  +D    L +E M  GS+   LS           NY     +           +
Sbjct: 67  RMLGATCEDSHFNLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLR----------GL 116

Query: 143 EYLHFGHSTHLLLKEDQSLT----------------------------QIQTLATISYMA 174
            YLH     H  +K    L                             Q Q L TI++MA
Sbjct: 117 SYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMA 176

Query: 175 P------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNS---VMKV 219
           P            D ++ G +I+E  + K P             W  +   N    + K+
Sbjct: 177 PEVLRGEQYGRSCDVWSVGCVIIEMATAKPP-------------WNAEKHSNHLALIFKI 223

Query: 220 VSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM 263
            SA       EH          + ++ + C    P  R  ++E+
Sbjct: 224 ASATTAPSIPEHLSPG------LRDVTLRCLELQPEDRPPSREL 261

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 41.9 bits (99), Expect = 1e-04
 Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 30/121 (24%)

Query: 40  ISRGGFGSIYKAKIQDGMEVVVKGFNLQYG----GAFKNLDVECNMMKIIRHQNLIKIIS 95
           +  G FG ++        +V VK   L+ G     AF  L  E  +MK +RH  L+++ +
Sbjct: 14  LGAGQFGEVWMGTWNGTTKVAVK--TLKPGTMSPEAF--LQ-EAQIMKKLRHDKLVQLYA 68

Query: 96  SCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQ-------RLHIMID----VASAVEY 144
            CS+++   ++ E M  GSL          LDF +       RL  ++D    +A  + Y
Sbjct: 69  VCSEEEPIYIVTEYMSKGSL----------LDFLKSGEGKKLRLPQLVDMAAQIAEGMAY 118

Query: 145 L 145
           L
Sbjct: 119 L 119

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 41.7 bits (98), Expect = 1e-04
 Identities = 47/207 (22%), Positives = 80/207 (38%), Gaps = 55/207 (26%)

Query: 39  LISRGGFGSIYKA-KIQDGMEVVVKGFNL----------QYGGAFKNLDVECNMMKIIRH 87
           LI +G +G +Y A  +  G  + VK   L          +     K L  E   +K + H
Sbjct: 8   LIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDH 67

Query: 88  QNLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRL--HIMIDVASAVEYL 145
            N+++ +   + +++ ++ LE +P GS+G CL T      F ++L       V   + YL
Sbjct: 68  LNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYG---RFEEQLVRFFTEQVLEGLAYL 124

Query: 146 HFGHSTHLLLKEDQSLTQIQTLATIS-------------------------YMAP----- 175
           H     H  LK D  L     +  IS                         +MAP     
Sbjct: 125 HSKGILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHS 184

Query: 176 ---------DTYNFGIMIMETFSGKKP 193
                    D ++ G +++E F+G++P
Sbjct: 185 YSQGYSAKVDIWSLGCVVLEMFAGRRP 211

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 41.6 bits (98), Expect = 2e-04
 Identities = 46/200 (23%), Positives = 78/200 (39%), Gaps = 50/200 (25%)

Query: 39  LISRGGFGSIYKA-KIQDGMEVVVKGFNL-----QYGGAFKNLDVECNMMKIIRHQNLIK 92
           L+  G FGS+Y+   + DG    VK  +L         A K L+ E  ++  ++H N+++
Sbjct: 7   LLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQ 66

Query: 93  IISSCSKDDFKALILECMPHGSLGKCLS---------TSNY---ILDFFQRLH------- 133
            + +  ++D   + LE +P GSL K L             Y   IL   + LH       
Sbjct: 67  YLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHR 126

Query: 134 ------IMIDVASAVEYLHFGHSTHLL-LKEDQSLTQIQTLATISYMAP------DTYNF 180
                 I++D    V+   FG +  ++     +S        +  +MAP        Y  
Sbjct: 127 DIKGANILVDTNGVVKLADFGMAKQVVEFSFAKSFK-----GSPYWMAPEVIAQQGGYGL 181

Query: 181 -------GIMIMETFSGKKP 193
                  G  ++E  +GK P
Sbjct: 182 AADIWSLGCTVLEMATGKPP 201

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 40/173 (23%), Positives = 71/173 (41%), Gaps = 32/173 (18%)

Query: 34  FSESNL-----ISRGGFGSIYKAKIQDGME------VVVKGF------NLQYGGAFKNLD 76
           F  SNL     + RG FG ++ AK +   E      V+VK        NLQ    F+   
Sbjct: 2   FPRSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQ--SEFRR-- 57

Query: 77  VECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFF------- 129
            E +M + + H+N+++++  C + +   +ILE    G L + L  +    +         
Sbjct: 58  -ELDMFRKLSHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLST 116

Query: 130 -QRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQTLATISYMA--PDTYN 179
            Q++ +   +A  +++L      H  L     L   Q    +S ++   D YN
Sbjct: 117 KQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYN 169

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 40.7 bits (96), Expect = 3e-04
 Identities = 40/191 (20%), Positives = 73/191 (38%), Gaps = 38/191 (19%)

Query: 39  LISRGGFGSIYKA-KIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSC 97
            +  G +GS+YKA   + G  V +K   +      + +  E +++K      ++K   S 
Sbjct: 10  KLGEGSYGSVYKAIHKETGQVVAIKVVPV--EEDLQEIIKEISILKQCDSPYIVKYYGSY 67

Query: 98  SKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTH----- 152
            K+    +++E    GS+   +  +N  L   +   I+      +EYLH     H     
Sbjct: 68  FKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKA 127

Query: 153 --LLLKED---------------QSLTQIQTLA-TISYMAP------------DTYNFGI 182
             +LL E+                ++ +  T+  T  +MAP            D ++ GI
Sbjct: 128 GNILLNEEGQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGI 187

Query: 183 MIMETFSGKKP 193
             +E   GK P
Sbjct: 188 TAIEMAEGKPP 198

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 40.8 bits (96), Expect = 3e-04
 Identities = 57/271 (21%), Positives = 96/271 (35%), Gaps = 65/271 (23%)

Query: 40  ISRGGFGSIYKAK-IQDGMEVVVKGFNL-QYGGAFKNLDVECNMMKIIRHQNLIKIISSC 97
           I  G    +Y A  + +  +V +K  +L +   +   L  E   M    H N++K  +S 
Sbjct: 9   IGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSF 68

Query: 98  SKDDFKALILECMPHGSLGKCLSTSNY--ILDFFQRLHIMIDVASAVEYLHFGHSTH--- 152
              D   L++  +  GSL   + +S     LD      ++ +V   +EYLH     H   
Sbjct: 69  VVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDI 128

Query: 153 ----LLLKEDQSL--------------TQIQTLA------TISYMAP------------- 175
               +LL ED S+                           T  +MAP             
Sbjct: 129 KAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKA 188

Query: 176 DTYNFGIMIMETFSGKKPTIKFFHGE---MTLKHWVNDLLPNSVMKVVSANLLSREDEHF 232
           D ++FGI  +E  +G  P  K+   +   +TL++    L   +  K  S           
Sbjct: 189 DIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSK---------- 238

Query: 233 MTKEQCMSFVFNLAMECTVESPNQRINAKEM 263
                  SF   +   C  + P++R  A+E+
Sbjct: 239 -------SFR-KMISLCLQKDPSKRPTAEEL 261

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 40.7 bits (95), Expect = 3e-04
 Identities = 47/189 (24%), Positives = 78/189 (41%), Gaps = 38/189 (20%)

Query: 40  ISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSK 99
           I +G FG +     + G +V VK   ++     +    E ++M  +RH NL++++    +
Sbjct: 14  IGKGEFGDVMLGDYR-GNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 70

Query: 100 DDFKALIL-ECMPHGSLGKCL-STSNYILDFFQRLHIMIDVASAVEYLHFGHSTH----- 152
           +     I+ E M  GSL   L S    +L     L   +DV  A+EYL   +  H     
Sbjct: 71  EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAA 130

Query: 153 --LLLKEDQ-------------SLTQIQTLATISYMAP------------DTYNFGIMIM 185
             +L+ ED              S TQ      + + AP            D ++FGI++ 
Sbjct: 131 RNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLW 190

Query: 186 ETFS-GKKP 193
           E +S G+ P
Sbjct: 191 EIYSFGRVP 199

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 41.0 bits (97), Expect = 3e-04
 Identities = 27/123 (21%), Positives = 49/123 (39%), Gaps = 28/123 (22%)

Query: 40  ISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDV-------------ECNMMKIIR 86
           I  G +G +YKA+ +   E+V          A K + +             E  +++ +R
Sbjct: 7   IGEGTYGQVYKARNKKTGELV----------ALKKIRMENEKEGFPITAIREIKLLQKLR 56

Query: 87  HQNLIK---IISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVE 143
           H N+++   I++S  K     ++ E M H  L   L +        Q    M  +   ++
Sbjct: 57  HPNIVRLKEIVTSKGKGSI-YMVFEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQ 114

Query: 144 YLH 146
           YLH
Sbjct: 115 YLH 117

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 40.7 bits (95), Expect = 4e-04
 Identities = 55/259 (21%), Positives = 98/259 (37%), Gaps = 66/259 (25%)

Query: 56  GMEVVVKGFNLQYGGA-FKNLDVECNMMKIIRHQNLIKIISSCSKDDFKA--LILECMPH 112
           G +V VK    + GG    +L  E  +++ + H+N++K    C++D      LI+E +P 
Sbjct: 33  GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 92

Query: 113 GSLGKCLSTSNYILDFFQRLHIMIDVASAVEYL---HFGH-----------STHLLLKED 158
           GSL + L  +   ++  Q+L   + +   ++YL    + H           S H +   D
Sbjct: 93  GSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGD 152

Query: 159 QSLTQ-IQT-----------------------LATISYMAPDTYNFGIMIMETF----SG 190
             LT+ I+T                       + +  Y+A D ++FG+ + E      S 
Sbjct: 153 FGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSE 212

Query: 191 KKPTIKFF------HGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFN 244
             P   F       HG+MT+   V  L                E +       C   V+ 
Sbjct: 213 SSPMTLFLKMIGPTHGQMTVTRLVRVL---------------EEGKRLPRPPNCPEEVYQ 257

Query: 245 LAMECTVESPNQRINAKEM 263
           L  +C    P++R   + +
Sbjct: 258 LMRKCWEFQPSKRTTFQNL 276

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 40.1 bits (94), Expect = 5e-04
 Identities = 47/203 (23%), Positives = 79/203 (38%), Gaps = 46/203 (22%)

Query: 40  ISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDV--ECNMMKIIRHQNLIKIISSC 97
           +  G FG ++  K +  ++V +K       GA    D   E  +M  + H NL+++   C
Sbjct: 12  LGSGQFGVVHLGKWRGKIDVAIKMIR---EGAMSEDDFIEEAKVMMKLSHPNLVQLYGVC 68

Query: 98  SKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLH----------- 146
           +K     ++ E M +G L   L      L     L +  DV  A+EYL            
Sbjct: 69  TKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAA 128

Query: 147 ---------------FGHSTHLLLKEDQSLTQIQTLATISYMAP------------DTYN 179
                          FG + ++L  +DQ  +   T   + +  P            D ++
Sbjct: 129 RNCLVGEDNVVKVSDFGLARYVL--DDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWS 186

Query: 180 FGIMIMETFS-GKKPTIKFFHGE 201
           FG+++ E FS GK P  +F + E
Sbjct: 187 FGVLMWEVFSEGKMPYERFSNSE 209

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 39.6 bits (93), Expect = 7e-04
 Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 8/127 (6%)

Query: 40  ISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCS 98
           I  G +G +YKA+ I  G  V +K   L+ G  F+ +  E +M+K  RH N++    S  
Sbjct: 11  IGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYL 70

Query: 99  KDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTH------ 152
           + D   +++E    GSL      +   L   Q  ++  +    + YLH     H      
Sbjct: 71  RRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGA 130

Query: 153 -LLLKED 158
            +LL ED
Sbjct: 131 NILLTED 137

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 40.0 bits (93), Expect = 7e-04
 Identities = 34/129 (26%), Positives = 56/129 (43%), Gaps = 22/129 (17%)

Query: 38  NLISRGGFGSIYKAKI-QDG--MEVVVKGFNLQYGGAFKNLDVECNMMKIIR---HQNLI 91
           ++I  G FG + KA+I +DG  M+  +K    +Y     + D    +  + +   H N+I
Sbjct: 13  DVIGEGNFGQVLKARIKKDGLRMDAAIKRMK-EYASKDDHRDFAGELEVLCKLGHHPNII 71

Query: 92  KIISSCSKDDFKALILECMPHGSLGKCLSTSNYI---------------LDFFQRLHIMI 136
            ++ +C    +  L +E  PHG+L   L  S  +               L   Q LH   
Sbjct: 72  NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 131

Query: 137 DVASAVEYL 145
           DVA  ++YL
Sbjct: 132 DVARGMDYL 140

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 39.2 bits (92), Expect = 0.001
 Identities = 42/210 (20%), Positives = 80/210 (38%), Gaps = 54/210 (25%)

Query: 40  ISRGGFGSIYKA-KIQDG----MEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKII 94
           IS+G +G ++ A K   G    ++V+ K  ++        +  E +++   +   ++K+ 
Sbjct: 1   ISKGAYGRVFLAKKKSTGDIYAIKVIKKA-DMIRKNQVDQVLTERDILSQAQSPYVVKLY 59

Query: 95  SSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLH-------- 146
            S        L++E +P G L   L     + +   R++I  ++  A+EYLH        
Sbjct: 60  YSFQGKKNLYLVMEYLPGGDLASLLENVGSLDEDVARIYIA-EIVLALEYLHSNGIIHRD 118

Query: 147 ------------------FGHSTHLLLKEDQSLTQI-----QTLATISYMAPDT-----Y 178
                             FG S   L++   +L        + + T  Y+AP+      +
Sbjct: 119 LKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGH 178

Query: 179 NF-------GIMIMETFSGKKPTIKFFHGE 201
           +        G ++ E   G  P    FHGE
Sbjct: 179 SKTVDWWSLGCILYEFLVGIPP----FHGE 204

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 38.1 bits (88), Expect = 0.002
 Identities = 47/231 (20%), Positives = 89/231 (38%), Gaps = 66/231 (28%)

Query: 76  DVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLG-----KCLSTSNYILDFFQ 130
           ++ C +  + + Q L  I S CS  D    ++   PH  +G     K + ++    DF  
Sbjct: 69  NIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFV- 127

Query: 131 RLHIMIDVASAVEYLHFGHSTHL------LLKEDQSLTQI-------------------Q 165
             HI+  +A+ +E+L   H  H       +L  D+   +I                    
Sbjct: 128 --HIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGN 185

Query: 166 TLATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLL 212
           +L  I +M+P            D +++G+++ E FS G +P   +               
Sbjct: 186 SLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY--------------- 230

Query: 213 PNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM 263
             S   V+    + R  +     + C ++V+ L +EC  E P++R   K++
Sbjct: 231 --SNQDVIE---MIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDI 276

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 38.3 bits (89), Expect = 0.003
 Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 4/77 (5%)

Query: 78  ECNMMKIIRHQNLIKIISSCSKDDFKA--LILECMPHGSLGKCLSTSNYILDFFQRLHIM 135
           E N++K + H+N++K    CS+   K   LI+E +P GSL   L      L+  Q L   
Sbjct: 56  EINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPKHK--LNLAQLLLFA 113

Query: 136 IDVASAVEYLHFGHSTH 152
             +   + YLH  H  H
Sbjct: 114 QQICEGMAYLHSQHYIH 130

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 38.0 bits (88), Expect = 0.003
 Identities = 46/200 (23%), Positives = 84/200 (42%), Gaps = 43/200 (21%)

Query: 40  ISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSK 99
           I  G FG++ + +   G +V VK  N++     +    E  +M  + H+NL++++     
Sbjct: 14  IGEGEFGAVLQGEYT-GQKVAVK--NIKCDVTAQAFLEETAVMTKLHHKNLVRLLGVILH 70

Query: 100 DDFKALILECMPHGSLGKCLST-SNYILDFFQRLHIMIDVASAVEYLHFGHSTH------ 152
           +    +++E M  G+L   L T    ++   Q L   +DVA  +EYL      H      
Sbjct: 71  NGLY-IVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAAR 129

Query: 153 -LLLKED-------------QSLTQIQTLATISYMAP------------DTYNFGIMIME 186
            +L+ ED              S+    +   + + AP            D +++G+++ E
Sbjct: 130 NILVSEDGVAKVSDFGLARVGSMGVDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWE 189

Query: 187 TFS-GKKPTIKFFHGEMTLK 205
            FS G+ P  K     M+LK
Sbjct: 190 VFSYGRAPYPK-----MSLK 204

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 37.9 bits (88), Expect = 0.003
 Identities = 35/164 (21%), Positives = 62/164 (37%), Gaps = 42/164 (25%)

Query: 81  MMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVAS 140
           MMK+  H+ L+++   C+K     ++ E M +G L   L          Q L +  DV  
Sbjct: 53  MMKL-SHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCE 111

Query: 141 AVEYLH--------------------------FGHSTHLLLKEDQSLTQIQTLATISYMA 174
            + YL                           FG S ++L  +D+  + + +   + +  
Sbjct: 112 GMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVL--DDEYTSSVGSKFPVRWSP 169

Query: 175 P------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLK 205
           P            D + FG+++ E +S GK P  +F + E   K
Sbjct: 170 PEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEK 213

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 38.0 bits (89), Expect = 0.003
 Identities = 30/122 (24%), Positives = 54/122 (44%), Gaps = 18/122 (14%)

Query: 40  ISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGG---AFKNLDV-ECNMMKIIRHQNLIK-- 92
           I +G FG++ K +   DG  +V K  +  YG      K   V E N+++ ++H N+++  
Sbjct: 8   IGKGSFGTVRKVRRKSDGKILVWKEID--YGNMTEKEKQQLVSEVNILRELKHPNIVRYY 65

Query: 93  --IISSCSKDDFKALILECMPHGSLG----KCLSTSNYILDFFQRLHIMIDVASAVEYLH 146
             II   ++  +  +++E    G L     KC     YI + F    I+  +  A+   H
Sbjct: 66  DRIIDRSNQTLY--IVMEYCEGGDLAQLIQKCKKERKYIEEEFI-WRILTQLLLALYECH 122

Query: 147 FG 148
             
Sbjct: 123 NR 124

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 37.7 bits (88), Expect = 0.003
 Identities = 43/224 (19%), Positives = 73/224 (32%), Gaps = 66/224 (29%)

Query: 77  VECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMI 136
            E  +M  + H+NLI++           ++ E  P GSL   L      L  F  +  + 
Sbjct: 45  KEAAIMHSLDHENLIRLYGVVLTHPLM-MVTELAPLGSLLDRLRKDA--LGHFL-ISTLC 100

Query: 137 D----VASAVEYLH--------------------------FGHSTHLLLKEDQSLTQIQT 166
           D    +A+ + YL                           FG    L   ED  + +   
Sbjct: 101 DYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHL 160

Query: 167 LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLP 213
               ++ AP            D + FG+ + E F+ G++P      G   LK        
Sbjct: 161 KVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAG-LSGSQILK-------- 211

Query: 214 NSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQR 257
                      + +E E     E C   ++N+ ++C   +P  R
Sbjct: 212 ----------KIDKEGERLERPEACPQDIYNVMLQCWAHNPADR 245

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 37.6 bits (87), Expect = 0.004
 Identities = 55/267 (20%), Positives = 102/267 (38%), Gaps = 64/267 (23%)

Query: 35  SESNLISRGGFGSIYKA--KIQDGMEVVVKGFNLQYGGAFK---NLDVECNMMKIIRHQN 89
           ++  +I  G FG +++   K+    EV V    L+ G   K   +   E ++M    H N
Sbjct: 8   TKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHN 67

Query: 90  LIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLH--- 146
           +I++    +K     +I E M +G+L K L   +     +Q + ++  +A+ ++YL    
Sbjct: 68  IIRLEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMN 127

Query: 147 -----------------------FGHSTHLLLKEDQSLTQIQTLATISYMAP-------- 175
                                  FG S  L    + + T       I + AP        
Sbjct: 128 YVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKF 187

Query: 176 ----DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDE 230
               D ++FGI++ E  S G++P            +W  D+  + VMK ++      +  
Sbjct: 188 TSASDVWSFGIVMWEVMSFGERP------------YW--DMSNHEVMKAIN------DGF 227

Query: 231 HFMTKEQCMSFVFNLAMECTVESPNQR 257
                  C S V+ L ++C  +   +R
Sbjct: 228 RLPAPMDCPSAVYQLMLQCWQQDRARR 254

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	263
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	100.0
KOG0582	516	consensus Ste20-like serine/threonine protein kina	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	100.0
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	100.0
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	100.0
KOG0605	550	consensus NDR and related serine/threonine kinases	100.0
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	100.0
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	100.0
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
PHA02988	283	hypothetical protein; Provisional	100.0
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	100.0
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	100.0
KOG0610	459	consensus Putative serine/threonine protein kinase	100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	100.0
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	100.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
KOG4717	864	consensus Serine/threonine protein kinase [Signal	100.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	100.0
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	100.0
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	100.0
KOG0596	677	consensus Dual specificity; serine/threonine and t	100.0
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	100.0
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	100.0
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	100.0
PTZ00267	478	NIMA-related protein kinase; Provisional	100.0
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	100.0
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	100.0
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	100.0
KOG0611	668	consensus Predicted serine/threonine protein kinas	100.0
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	100.0
KOG0589	426	consensus Serine/threonine protein kinase [General	100.0
PLN00034	353	mitogen-activated protein kinase kinase; Provision	100.0
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	100.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	100.0
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	100.0
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	100.0
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	100.0
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	100.0
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	100.0
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	100.0
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	100.0
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	100.0
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	100.0
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	100.0
KOG0694	694	consensus Serine/threonine protein kinase [Signal	100.0
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	100.0
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	100.0
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	100.0
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	100.0
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	100.0
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	100.0
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	100.0
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	100.0
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	100.0
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	100.0
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	100.0
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	100.0
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	100.0
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	100.0
KOG0607	463	consensus MAP kinase-interacting kinase and relate	100.0
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	100.0
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	100.0
PHA03212	391	serine/threonine kinase US3; Provisional	100.0
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	100.0
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	100.0
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	100.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	100.0
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	100.0
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	100.0
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	100.0
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	100.0
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	100.0
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	100.0
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	100.0
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	100.0
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	100.0
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	100.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	100.0
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	100.0
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	100.0
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	100.0
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	100.0
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	100.0
KOG0201	467	consensus Serine/threonine protein kinase [Signal	100.0
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	100.0
PTZ00036	440	glycogen synthase kinase; Provisional	100.0
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	100.0
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	100.0
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	100.0
KOG4721	904	consensus Serine/threonine protein kinase, contain	100.0
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	100.0
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	100.0
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	100.0
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	100.0
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	100.0
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	100.0
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	100.0
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	100.0
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	100.0
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	100.0
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	100.0
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	100.0
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	100.0
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	100.0
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	100.0
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	100.0
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	100.0
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	100.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	100.0
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	100.0
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	100.0
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	100.0
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	100.0
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	100.0
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	100.0
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	100.0
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	100.0
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	100.0
KOG1989	738	consensus ARK protein kinase family [Signal transd	100.0
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	100.0
PTZ00283	496	serine/threonine protein kinase; Provisional	100.0
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	100.0
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	100.0
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	100.0
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	100.0
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	100.0
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	100.0
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	100.0
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	100.0
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	100.0
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	100.0
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	100.0
PTZ00266	1021	NIMA-related protein kinase; Provisional	100.0
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	100.0
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	100.0
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	100.0
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	100.0
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	100.0
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	100.0
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	100.0
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	100.0
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	100.0
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	100.0
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	100.0
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	100.0
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	100.0
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	100.0
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	100.0
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	100.0
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	100.0
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	100.0
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	100.0
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	100.0
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	100.0
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	100.0
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	100.0
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	100.0
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	100.0
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	100.0
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	100.0
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	100.0
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	100.0
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	100.0
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	100.0
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	100.0
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	100.0
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	100.0
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	100.0
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	100.0
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	100.0
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	100.0
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	100.0
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	100.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	100.0
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	100.0
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	100.0
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	100.0
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	100.0
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	100.0
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	100.0
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	100.0
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	100.0
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	100.0
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	100.0
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	100.0
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	100.0
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	100.0
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	100.0
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	100.0
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	100.0
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	100.0
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	100.0
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	100.0
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	100.0
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	100.0
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	100.0
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	100.0
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	100.0
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	100.0
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	100.0
PTZ00284	467	protein kinase; Provisional	100.0
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	100.0
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	100.0
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	100.0
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	100.0
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	100.0
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	100.0
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	100.0
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	100.0
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	100.0
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	100.0
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	100.0
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	100.0
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	100.0
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	100.0
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	100.0
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	100.0
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	100.0
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	100.0
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	100.0
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	100.0
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	100.0
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	100.0
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	100.0
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	100.0
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	100.0
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	100.0
PHA03207	392	serine/threonine kinase US3; Provisional	100.0
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	100.0
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	100.0
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	100.0
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	100.0
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	100.0
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	100.0
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	100.0
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	100.0
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	100.0
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	100.0
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	100.0
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	100.0
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	100.0
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	100.0
PHA03209	357	serine/threonine kinase US3; Provisional	100.0
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	100.0
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	100.0
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	100.0
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	100.0
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	100.0
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	100.0
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	100.0
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	100.0
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	100.0
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	100.0
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	100.0
PHA03211	461	serine/threonine kinase US3; Provisional	100.0
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	100.0
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	100.0
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	100.0
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	100.0
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	100.0
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	100.0
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	100.0
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	100.0
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	100.0
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	100.0
KOG0577	948	consensus Serine/threonine protein kinase [Signal	100.0
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	100.0
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	100.0
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	100.0
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	100.0
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	100.0
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	100.0
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	100.0
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	100.0
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	100.0
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	100.0
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	100.0
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	100.0
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	100.0
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	100.0
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	100.0
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	100.0
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	100.0
KOG0584	632	consensus Serine/threonine protein kinase [General	100.0
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	100.0
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	100.0
KOG0586	596	consensus Serine/threonine protein kinase [General	100.0
PLN00009	294	cyclin-dependent kinase A; Provisional	100.0
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	100.0
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	100.0
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.98
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.98
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.98
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.98
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.98
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.98
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.98
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.98
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.98
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.98
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.98
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.98
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.97
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.97
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.97
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.97
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.97
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.97
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.97
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.97
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.97
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.97
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.97
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.97
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.97
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.97
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.97
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.97
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.97
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.97
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.97
PHA02882	294	putative serine/threonine kinase; Provisional	99.97
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.97
PHA03210	501	serine/threonine kinase US3; Provisional	99.97
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.97
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.97
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.97
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.97
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.97
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.97
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.97
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.97
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.96
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.96
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.96
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.96
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.96
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.96
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.96
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.96
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.96
KOG3653	534	consensus Transforming growth factor beta/activin	99.96
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.96
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.96
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.95
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.95
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.95
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.95
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.95
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.95
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.95
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.94
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.94
KOG1152	772	consensus Signal transduction serine/threonine kin	99.94
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.94
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.94
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.93
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.92
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.92
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.92
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.91
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.91
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.9
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.89
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.89
PLN00181	793	protein SPA1-RELATED; Provisional	99.88
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.88
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.88
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.84
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.82
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.81
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.8
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.78
PRK09188	365	serine/threonine protein kinase; Provisional	99.78
PRK10345	210	hypothetical protein; Provisional	99.77
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.77
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.75
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.73
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.73
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.72
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.67
PRK12274	218	serine/threonine protein kinase; Provisional	99.65
PRK14879	211	serine/threonine protein kinase; Provisional	99.65
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.64
smart00090	237	RIO RIO-like kinase.	99.64
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.61
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.6
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.59
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.54
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.47
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.44
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.44
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.41
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.38
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.37
KOG1243	690	consensus Protein kinase [General function predict	99.19
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.16
KOG1266	458	consensus Protein kinase [Signal transduction mech	99.12
KOG3087	229	consensus Serine/threonine protein kinase [General	99.02
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	98.97
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	98.92
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	98.9
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	98.89
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	98.86
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	98.85
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	98.75
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	98.72
KOG0606	1205	consensus Microtubule-associated serine/threonine	98.67
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.56
COG4248	637	Uncharacterized protein with protein kinase and he	98.49
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	98.37
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.23
PRK09902	216	hypothetical protein; Provisional	98.11
COG0478	304	RIO-like serine/threonine protein kinase fused to	97.99
COG0661	517	AarF Predicted unusual protein kinase [General fun	97.8
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	97.77
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	97.72
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	97.64
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	97.58
KOG2137	700	consensus Protein kinase [Signal transduction mech	97.58
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	97.51
KOG1235	538	consensus Predicted unusual protein kinase [Genera	97.4
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	97.26
KOG1093	725	consensus Predicted protein kinase (contains TBC a	97.16
PLN02876	822	acyl-CoA dehydrogenase	97.09
PRK10593	297	hypothetical protein; Provisional	97.05
KOG0576	829	consensus Mitogen-activated protein kinase kinase	96.98
PF01636	239	APH: Phosphotransferase enzyme family This family	96.9
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	96.73
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	96.37
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	96.13
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	96.04
KOG2270	520	consensus Serine/threonine protein kinase involved	95.94
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	95.38
PRK05231	319	homoserine kinase; Provisional	94.71
PRK09550	401	mtnK methylthioribose kinase; Reviewed	94.66
PF03109	119	ABC1: ABC1 family; InterPro: IPR004147 This entry	94.32
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	93.75
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	91.0
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	90.5
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	90.46
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	90.36
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	89.45
PLN02756	418	S-methyl-5-thioribose kinase	88.8
KOG1236	565	consensus Predicted unusual protein kinase [Genera	88.38
PF04655	253	APH_6_hur: Aminoglycoside/hydroxyurea antibiotic r	88.1
KOG2268	465	consensus Serine/threonine protein kinase [Signal	86.69
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	84.68
COG3231	266	Aph Aminoglycoside phosphotransferase [Translation	84.22
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	83.08
PLN02236	344	choline kinase	82.12
COG3001	286	Uncharacterized protein conserved in bacteria [Fun	82.04
PF12799	44	LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_	80.45

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=4.9e-45  Score=311.79  Aligned_cols=210  Identities=18%  Similarity=0.233  Sum_probs=181.9

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecC---CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQ---YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      .+|...+.||+|+|+.+|.++. .+|..||+|++.++   ....++++.+||++++.++|||||+++++|++.+.+|+|+
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL   97 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL   97 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence            4599999999999999999995 78999999999874   4567888999999999999999999999999999999999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-----------------------
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-----------------------  164 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-----------------------  164 (263)
                      |+|++++|..+++. .+.+++..+..++.||+.||.|||+++|+|||||..|++++.                       
T Consensus        98 ELC~~~sL~el~Kr-rk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk~  176 (592)
T KOG0575|consen   98 ELCHRGSLMELLKR-RKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERKK  176 (592)
T ss_pred             EecCCccHHHHHHh-cCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCcccccc
Confidence            99999999999985 445999999999999999999999999999999999999544                       


Q ss_pred             cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccc
Q 039276          165 QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHF  232 (263)
Q Consensus       165 ~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (263)
                      +..||+.|+||            ||||+||++|-|++|++||...                 .+-+.    ........+
T Consensus       177 TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk-----------------~vket----y~~Ik~~~Y  235 (592)
T KOG0575|consen  177 TLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETK-----------------TVKET----YNKIKLNEY  235 (592)
T ss_pred             eecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccc-----------------hHHHH----HHHHHhcCc
Confidence            34799999999            9999999999999999998632                 01111    111122233


Q ss_pred             cchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          233 MTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       233 ~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ..|..++.++.+||.++|+.||.+|||+++|
T Consensus       236 ~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~v  266 (592)
T KOG0575|consen  236 SMPSHLSAEAKDLIRKLLRPNPSERPSLDEV  266 (592)
T ss_pred             ccccccCHHHHHHHHHHhcCCcccCCCHHHH
Confidence            4566788889999999999999999999875

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.1e-45  Score=300.92  Aligned_cols=214  Identities=22%  Similarity=0.271  Sum_probs=177.7

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCCCch-------HHHHHHHHHHHhhcCCCcceeEeeEeecCCee
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGA-------FKNLDVECNMMKIIRHQNLIKIISSCSKDDFK  103 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~~-------~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~  103 (263)
                      +.|...+.||+|+||.|-+|. ..+|+.||||+++......       .....+|+++|++++|||||++.+++......
T Consensus       172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~  251 (475)
T KOG0615|consen  172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSS  251 (475)
T ss_pred             ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCce
Confidence            458889999999999999999 6779999999998763211       22245899999999999999999999999999


Q ss_pred             EEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-------------------
Q 039276          104 ALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-------------------  164 (263)
Q Consensus       104 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-------------------  164 (263)
                      |+||||+.||+|.+.+-.++. +.+...+.++.|++.|+.|||++||+||||||+|||+..                   
T Consensus       252 YmVlE~v~GGeLfd~vv~nk~-l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g  330 (475)
T KOG0615|consen  252 YMVLEYVEGGELFDKVVANKY-LREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSG  330 (475)
T ss_pred             EEEEEEecCccHHHHHHhccc-cccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhccc
Confidence            999999999999999987665 777778899999999999999999999999999999543                   


Q ss_pred             ------cccccccccCc---------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhc
Q 039276          165 ------QTLATISYMAP---------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSAN  223 (263)
Q Consensus       165 ------~~~g~~~y~aP---------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (263)
                            +..||+.|.||               |+||+||+||-+++|.+||.+..... ++               ....
T Consensus       331 ~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~-sl---------------~eQI  394 (475)
T KOG0615|consen  331 EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP-SL---------------KEQI  394 (475)
T ss_pred             cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCc-cH---------------HHHH
Confidence                  34799999999               99999999999999999998542211 11               1111


Q ss_pred             ccccccccccchHHHHHHHHHhhccccccCcCCCCCccC
Q 039276          224 LLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKE  262 (263)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~e  262 (263)
                      ........++....++++..++|.+||..||+.|||++|
T Consensus       395 ~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~e  433 (475)
T KOG0615|consen  395 LKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADE  433 (475)
T ss_pred             hcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHH
Confidence            222222233456789999999999999999999999986

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=5.4e-43  Score=284.02  Aligned_cols=216  Identities=18%  Similarity=0.220  Sum_probs=179.8

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecC-CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCC-eeEEEEe
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQ-YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDD-FKALILE  108 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-~~~lv~e  108 (263)
                      .+.+..+.||+|..|.||++. ..+++-+|+|++... +...++++.+|+++++..+||+||.++|.|...+ ...|+||
T Consensus        79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mE  158 (364)
T KOG0581|consen   79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICME  158 (364)
T ss_pred             HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehh
Confidence            468889999999999999999 556888999999655 4456888999999999999999999999999888 5999999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhcc-CCccccccCCCcccccc---------------------cc
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHF-GHSTHLLLKEDQSLTQI---------------------QT  166 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~-~~i~h~dlk~~nil~~~---------------------~~  166 (263)
                      ||.+|+|.+++...++ +++.....++.++++||.|||+ ++|+||||||+|+|.++                     +.
T Consensus       159 YMDgGSLd~~~k~~g~-i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~a~tf  237 (364)
T KOG0581|consen  159 YMDGGSLDDILKRVGR-IPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNSIANTF  237 (364)
T ss_pred             hcCCCCHHHHHhhcCC-CCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhhhcccc
Confidence            9999999999987655 8999999999999999999995 99999999999999554                     34


Q ss_pred             cccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccc
Q 039276          167 LATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT  234 (263)
Q Consensus       167 ~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (263)
                      +||..||||            ||||||+.++|+.+|+.||.....+...+            ..++.......++.   .
T Consensus       238 vGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~------------~~Ll~~Iv~~ppP~---l  302 (364)
T KOG0581|consen  238 VGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDI------------FELLCAIVDEPPPR---L  302 (364)
T ss_pred             cccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCH------------HHHHHHHhcCCCCC---C
Confidence            799999999            99999999999999999987541111222            22222222222111   2


Q ss_pred             hH-HHHHHHHHhhccccccCcCCCCCccCC
Q 039276          235 KE-QCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       235 ~~-~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +. .+++++.+++.+||+.||.+|||+.|+
T Consensus       303 P~~~fS~ef~~FV~~CL~Kdp~~R~s~~qL  332 (364)
T KOG0581|consen  303 PEGEFSPEFRSFVSCCLRKDPSERPSAKQL  332 (364)
T ss_pred             CcccCCHHHHHHHHHHhcCCcccCCCHHHH
Confidence            33 588999999999999999999999874

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=1.8e-42  Score=283.61  Aligned_cols=167  Identities=26%  Similarity=0.395  Sum_probs=152.5

Q ss_pred             cccccccccceecccCceEEEEEE-ecCCceEEEEEeecC--CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEE
Q 039276           29 SGLFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQ--YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKAL  105 (263)
Q Consensus        29 ~~~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l  105 (263)
                      +..++|...+.||.|+||.||+|+ ..++..||||.+.++  ..+..+-+..||.+|+.++|+|||.++++..+.++.|+
T Consensus         7 ~~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~l   86 (429)
T KOG0595|consen    7 RVVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYL   86 (429)
T ss_pred             cccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEE
Confidence            344679999999999999999999 566899999999877  45567778899999999999999999999999999999


Q ss_pred             EEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc--------------------
Q 039276          106 ILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ--------------------  165 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~--------------------  165 (263)
                      |||||.+|+|.+|++..++ +++..+..++.|++.||++||+++|+||||||+|||++..                    
T Consensus        87 VMEyC~gGDLs~yi~~~~~-l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L  165 (429)
T KOG0595|consen   87 VMEYCNGGDLSDYIRRRGR-LPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFL  165 (429)
T ss_pred             EEEeCCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhC
Confidence            9999999999999998765 8999999999999999999999999999999999996543                    


Q ss_pred             --------ccccccccCc------------chhhHHHHHHHHHhCCCCCcc
Q 039276          166 --------TLATISYMAP------------DTYNFGIMIMETFSGKKPTIK  196 (263)
Q Consensus       166 --------~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~  196 (263)
                              ..|++.||||            |+||+|+++|++++|+.||+.
T Consensus       166 ~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a  216 (429)
T KOG0595|consen  166 QPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDA  216 (429)
T ss_pred             CchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccc
Confidence                    2689999999            999999999999999999973

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6.9e-41  Score=284.01  Aligned_cols=237  Identities=32%  Similarity=0.544  Sum_probs=194.4

Q ss_pred             cccceecccCCcccccccccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEee
Q 039276           16 TSLKSLDLSNNNFSGLFLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIIS   95 (263)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~   95 (263)
                      .++.++..++++      |...+.||+|+||.||+|...++..||||.+.........++.+|++++.+++|+|+++++|
T Consensus        65 fs~~el~~AT~~------Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlG  138 (361)
T KOG1187|consen   65 FSYDELRKATNN------FSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLG  138 (361)
T ss_pred             eeHHHHHHHHhC------CchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEE
Confidence            344444555555      88889999999999999999888999999887664331455999999999999999999999


Q ss_pred             EeecCC-eeEEEEeccCCCCHhhhhhhCCC-cccHHHHHHHHHHHHHHHHHhccCC---ccccccCCCccccccc-----
Q 039276           96 SCSKDD-FKALILECMPHGSLGKCLSTSNY-ILDFFQRLHIMIDVASAVEYLHFGH---STHLLLKEDQSLTQIQ-----  165 (263)
Q Consensus        96 ~~~~~~-~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~lH~~~---i~h~dlk~~nil~~~~-----  165 (263)
                      +|.+.+ ..++|+||+++|+|.+.+..... .++|.++.+|+.+++.||+|||...   |+|||||++|||++.+     
T Consensus       139 yC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKl  218 (361)
T KOG1187|consen  139 YCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKL  218 (361)
T ss_pred             EEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEc
Confidence            999888 59999999999999999987665 6899999999999999999999865   9999999999995421     


Q ss_pred             ----------c---------cccccccCc------------chhhHHHHHHHHHhCCCCCcccc-CCCchhhhHhh-hcC
Q 039276          166 ----------T---------LATISYMAP------------DTYNFGIMIMETFSGKKPTIKFF-HGEMTLKHWVN-DLL  212 (263)
Q Consensus       166 ----------~---------~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~-~~~~~~~~~~~-~~~  212 (263)
                                .         .||.+|++|            |||||||++.||+||+.|.+... .++..+..|.. ...
T Consensus       219 sDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~  298 (361)
T KOG1187|consen  219 SDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLE  298 (361)
T ss_pred             cCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHH
Confidence                      1         689999999            99999999999999999987654 34445677753 334


Q ss_pred             CCchhhhhhhcccccccccccchH-HHHHHHHHhhccccccCcCCCCCccCC
Q 039276          213 PNSVMKVVSANLLSREDEHFMTKE-QCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ......++|+.+....     ... .....+..++.+|++.+|.+||+|.||
T Consensus       299 ~~~~~eiiD~~l~~~~-----~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~V  345 (361)
T KOG1187|consen  299 EGKLREIVDPRLKEGE-----YPDEKEVKKLAELALRCLRPDPKERPTMSQV  345 (361)
T ss_pred             CcchhheeCCCccCCC-----CChHHHHHHHHHHHHHHcCcCCCcCcCHHHH
Confidence            4478888888765311     121 456669999999999999999999874

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-41  Score=287.04  Aligned_cols=210  Identities=25%  Similarity=0.391  Sum_probs=180.0

Q ss_pred             ccccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccC
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMP  111 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~  111 (263)
                      ..+...+.||+|.||.|+.|.+....+|++|.++... -..+.+.+|++++++++|++||++++++..++.+||||||++
T Consensus       206 ~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~  284 (468)
T KOG0197|consen  206 EELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMP  284 (468)
T ss_pred             HHHHHHHHhcCCccceEEEEEEcCCCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecc
Confidence            4578889999999999999999977899999998752 234667799999999999999999999999888999999999


Q ss_pred             CCCHhhhhhh-CCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccccc-----------------------
Q 039276          112 HGSLGKCLST-SNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQTL-----------------------  167 (263)
Q Consensus       112 ~~~L~~~l~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~~-----------------------  167 (263)
                      .|+|.+|++. .+..+...+.+.++.||++|++||+++++|||||-.+|||.+.+.+                       
T Consensus       285 ~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~  364 (468)
T KOG0197|consen  285 KGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGG  364 (468)
T ss_pred             cCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccCCCceeecCCC
Confidence            9999999997 4455899999999999999999999999999999999999654331                       


Q ss_pred             -ccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccccc
Q 039276          168 -ATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFM  233 (263)
Q Consensus       168 -g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (263)
                       -+.-|.||            |||||||+|+||+| |+.||..+.+.              ++..      .-+.+.|++
T Consensus       365 kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~--------------ev~~------~le~GyRlp  424 (468)
T KOG0197|consen  365 KFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNE--------------EVLE------LLERGYRLP  424 (468)
T ss_pred             CCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHH--------------HHHH------HHhccCcCC
Confidence             24558999            99999999999999 99998653111              1122      224567788


Q ss_pred             chHHHHHHHHHhhccccccCcCCCCCccC
Q 039276          234 TKEQCMSFVFNLAMECTVESPNQRINAKE  262 (263)
Q Consensus       234 ~~~~~~~~l~~l~~~cl~~~p~~Rpt~~e  262 (263)
                      .|..||+++.++|..||..+|++|||++.
T Consensus       425 ~P~~CP~~vY~lM~~CW~~~P~~RPtF~~  453 (468)
T KOG0197|consen  425 RPEGCPDEVYELMKSCWHEDPEDRPTFET  453 (468)
T ss_pred             CCCCCCHHHHHHHHHHhhCCcccCCCHHH
Confidence            89999999999999999999999999864

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=1.8e-40  Score=279.87  Aligned_cols=212  Identities=26%  Similarity=0.404  Sum_probs=173.3

Q ss_pred             cccccceecccCceEEEEEEecCCceEEEEEeecCCCc--hHHHHHHHHHHHhhcCCCcceeEeeEeecCC-eeEEEEec
Q 039276           33 LFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGG--AFKNLDVECNMMKIIRHQNLIKIISSCSKDD-FKALILEC  109 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~--~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-~~~lv~e~  109 (263)
                      .....+.+|+|+||+||+|.+.....||+|.+......  ..+.+.+|+.++.+++||||++++|++.+.. ..++||||
T Consensus        42 ~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy  121 (362)
T KOG0192|consen   42 ELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEY  121 (362)
T ss_pred             HhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEe
Confidence            35556669999999999999984444999999765332  2568999999999999999999999998876 78999999


Q ss_pred             cCCCCHhhhhhh-CCCcccHHHHHHHHHHHHHHHHHhccCC-ccccccCCCccccccc----------------------
Q 039276          110 MPHGSLGKCLST-SNYILDFFQRLHIMIDVASAVEYLHFGH-STHLLLKEDQSLTQIQ----------------------  165 (263)
Q Consensus       110 ~~~~~L~~~l~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~h~dlk~~nil~~~~----------------------  165 (263)
                      +++|+|..++.. ....+++..+..++.||+.||+|||+++ |+|||||++|+|.+..                      
T Consensus       122 ~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~~~  201 (362)
T KOG0192|consen  122 MPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKTSM  201 (362)
T ss_pred             CCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeeccccccc
Confidence            999999999987 3556999999999999999999999999 9999999999994322                      


Q ss_pred             --ccccccccCc--------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccc
Q 039276          166 --TLATISYMAP--------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSRED  229 (263)
Q Consensus       166 --~~g~~~y~aP--------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (263)
                        ..||+.||||              ||||||+++|||+||+.||........ .            ...      ....
T Consensus       202 ~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~-~------------~~v------~~~~  262 (362)
T KOG0192|consen  202 TSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQV-A------------SAV------VVGG  262 (362)
T ss_pred             cCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHH-H------------HHH------HhcC
Confidence              3689999999              999999999999999999875322100 0            000      0112


Q ss_pred             ccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          230 EHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       230 ~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .+.+.+..+++.+..++.+||..||+.||++.+|
T Consensus       263 ~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei  296 (362)
T KOG0192|consen  263 LRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEI  296 (362)
T ss_pred             CCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHH
Confidence            2223355588889999999999999999998764

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-40  Score=269.55  Aligned_cols=210  Identities=21%  Similarity=0.266  Sum_probs=175.1

Q ss_pred             cccccccccceecccCceEEEEEE-ecCCceEEEEEeecC---CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeE
Q 039276           29 SGLFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQ---YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKA  104 (263)
Q Consensus        29 ~~~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~  104 (263)
                      ...++|+..+.||+|+||+||.++ .++++-+|+|+++++   ..+..+....|..++..++||.|++++-.|++.+.+|
T Consensus        22 ~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLy  101 (357)
T KOG0598|consen   22 VGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLY  101 (357)
T ss_pred             CChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEE
Confidence            345679999999999999999999 556889999999876   3445677888999999999999999999999999999


Q ss_pred             EEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc--------------------
Q 039276          105 LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI--------------------  164 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~--------------------  164 (263)
                      +|+||+.||.|...+++.+. +++..+..++.+|+.||.|||+++|+||||||+|||++.                    
T Consensus       102 lVld~~~GGeLf~hL~~eg~-F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~  180 (357)
T KOG0598|consen  102 LVLDYLNGGELFYHLQREGR-FSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGD  180 (357)
T ss_pred             EEEeccCCccHHHHHHhcCC-cchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcccCCC
Confidence            99999999999999987665 899999999999999999999999999999999999443                    


Q ss_pred             ---cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccc
Q 039276          165 ---QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSRED  229 (263)
Q Consensus       165 ---~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (263)
                         +..||+.||||            |.||||+++|||++|.+||.....                 .+..+......  
T Consensus       181 ~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~-----------------~~~~~~I~~~k--  241 (357)
T KOG0598|consen  181 ATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDV-----------------KKMYDKILKGK--  241 (357)
T ss_pred             ccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccH-----------------HHHHHHHhcCc--
Confidence               34799999999            999999999999999999864211                 11111111111  


Q ss_pred             ccccchHHHHHHHHHhhccccccCcCCCCC
Q 039276          230 EHFMTKEQCMSFVFNLAMECTVESPNQRIN  259 (263)
Q Consensus       230 ~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt  259 (263)
                       ....+.-.+.++++++.++|+.||++|.-
T Consensus       242 -~~~~p~~ls~~ardll~~LL~rdp~~RLg  270 (357)
T KOG0598|consen  242 -LPLPPGYLSEEARDLLKKLLKRDPRQRLG  270 (357)
T ss_pred             -CCCCCccCCHHHHHHHHHHhccCHHHhcC
Confidence             01123336778999999999999999963

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1e-40  Score=273.87  Aligned_cols=214  Identities=23%  Similarity=0.341  Sum_probs=175.3

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCC--eeEEEEe
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDD--FKALILE  108 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--~~~lv~e  108 (263)
                      ..+..++.||+|+||.||++.. ++|...|||..........+.+.+|+.+++.++|||||+++|.....+  ..+++||
T Consensus        17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE   96 (313)
T KOG0198|consen   17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME   96 (313)
T ss_pred             chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence            3488899999999999999994 458999999998774444677899999999999999999999855444  6899999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc------------------------
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI------------------------  164 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~------------------------  164 (263)
                      |+++|+|.+++...+..+++..+..+..|+++||+|||++|++|+||||+|||+..                        
T Consensus        97 y~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~  176 (313)
T KOG0198|consen   97 YAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSD  176 (313)
T ss_pred             ccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCcccccccccccccc
Confidence            99999999999986646899999999999999999999999999999999999644                        


Q ss_pred             ---cccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccc
Q 039276          165 ---QTLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSRE  228 (263)
Q Consensus       165 ---~~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (263)
                         ...||+.||||             |||||||++.||+||+.||..+. .  ....         ...+....     
T Consensus       177 ~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~-~--~~~~---------~~~ig~~~-----  239 (313)
T KOG0198|consen  177 SELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFF-E--EAEA---------LLLIGRED-----  239 (313)
T ss_pred             ccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhc-c--hHHH---------HHHHhccC-----
Confidence               13689999999             99999999999999999987640 0  0000         00111000     


Q ss_pred             cccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          229 DEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       229 ~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                       .-+..+..+++++.+++.+|+..+|++||||+++
T Consensus       240 -~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eL  273 (313)
T KOG0198|consen  240 -SLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEEL  273 (313)
T ss_pred             -CCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHH
Confidence             1113456688889999999999999999999874

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=9.7e-41  Score=281.83  Aligned_cols=211  Identities=18%  Similarity=0.292  Sum_probs=176.5

Q ss_pred             cccccccceecccCceEEEEEE-ecCCceEEEEEeecC---CCchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCeeEE
Q 039276           31 LFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQ---YGGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFKAL  105 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~---~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~l  105 (263)
                      ..+|..++.||.|+|++|++|+ ..+++.+|||++.++   ...-.+.+..|=.+|.++ +||+|++++-.|+|...+|+
T Consensus        72 ~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYF  151 (604)
T KOG0592|consen   72 PNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYF  151 (604)
T ss_pred             hhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEE
Confidence            4679999999999999999999 667999999999765   223345566777888888 89999999999999999999


Q ss_pred             EEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc---------------------
Q 039276          106 ILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI---------------------  164 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~---------------------  164 (263)
                      |+||+++|+|.+++..-+. +++.....++.+|+.||+|||++|||||||||+|||++.                     
T Consensus       152 vLe~A~nGdll~~i~K~Gs-fde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~  230 (604)
T KOG0592|consen  152 VLEYAPNGDLLDLIKKYGS-FDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKS  230 (604)
T ss_pred             EEEecCCCcHHHHHHHhCc-chHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChhhcc
Confidence            9999999999999988765 899999999999999999999999999999999999322                     


Q ss_pred             ---------------cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchh
Q 039276          165 ---------------QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVM  217 (263)
Q Consensus       165 ---------------~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~  217 (263)
                                     ..+||..|.+|            |+|+|||++|+|+.|.+||... ++--.+            .
T Consensus       231 ~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~-NeyliF------------q  297 (604)
T KOG0592|consen  231 QENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAA-NEYLIF------------Q  297 (604)
T ss_pred             ccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccc-cHHHHH------------H
Confidence                           35799999999            9999999999999999998631 111111            1


Q ss_pred             hhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          218 KVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +++...        +.++...++.+.+|+.+.|..||.+|+|+++|
T Consensus       298 kI~~l~--------y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qI  335 (604)
T KOG0592|consen  298 KIQALD--------YEFPEGFPEDARDLIKKLLVRDPSDRLTSQQI  335 (604)
T ss_pred             HHHHhc--------ccCCCCCCHHHHHHHHHHHccCccccccHHHH
Confidence            222211        23456667889999999999999999998775

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.2e-39  Score=274.45  Aligned_cols=211  Identities=19%  Similarity=0.240  Sum_probs=174.8

Q ss_pred             cccccccceecccCceEEEEEE-ecCCceEEEEEeecC----CC-chHHHHHHHHHHHhhcC-CCcceeEeeEeecCCee
Q 039276           31 LFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQ----YG-GAFKNLDVECNMMKIIR-HQNLIKIISSCSKDDFK  103 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~----~~-~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~  103 (263)
                      ...|..++.||.|+||+|+.|. ..++..||+|++..+    .. ...+.+.+|+.+++.+. ||||+++++++......
T Consensus        16 ~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~   95 (370)
T KOG0583|consen   16 IGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKI   95 (370)
T ss_pred             cCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeE
Confidence            4569999999999999999998 667899999977654    22 34556678999999998 99999999999999999


Q ss_pred             EEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc------------------
Q 039276          104 ALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ------------------  165 (263)
Q Consensus       104 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~------------------  165 (263)
                      ++||||+.+|+|.+++... +.+.+..+..++.|++.|++|||.+||+||||||+|++++..                  
T Consensus        96 ~ivmEy~~gGdL~~~i~~~-g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~  174 (370)
T KOG0583|consen   96 YIVMEYCSGGDLFDYIVNK-GRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISPGE  174 (370)
T ss_pred             EEEEEecCCccHHHHHHHc-CCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccCCC
Confidence            9999999999999999984 448889999999999999999999999999999999995543                  


Q ss_pred             ------ccccccccCc--------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccc
Q 039276          166 ------TLATISYMAP--------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLL  225 (263)
Q Consensus       166 ------~~g~~~y~aP--------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (263)
                            ..||+.|+||              ||||+||+||.|++|+.||++.     ..            ......   
T Consensus       175 ~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~-----~~------------~~l~~k---  234 (370)
T KOG0583|consen  175 DGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDS-----NV------------PNLYRK---  234 (370)
T ss_pred             CCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCc-----cH------------HHHHHH---
Confidence                  3689999999              9999999999999999999751     00            011111   


Q ss_pred             ccccccccchHHH-HHHHHHhhccccccCcCCCCCccCC
Q 039276          226 SREDEHFMTKEQC-MSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       226 ~~~~~~~~~~~~~-~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                       .....+..+..+ ++++.+++.+|+..||.+|+|+.+|
T Consensus       235 -i~~~~~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i  272 (370)
T KOG0583|consen  235 -IRKGEFKIPSYLLSPEARSLIEKMLVPDPSTRITLLEI  272 (370)
T ss_pred             -HhcCCccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHH
Confidence             011112234445 7889999999999999999998765

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.5e-39  Score=280.17  Aligned_cols=210  Identities=21%  Similarity=0.299  Sum_probs=182.0

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCC---CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      +.|+.++.||.|+.|.|-+|+ ..+|+.+|||++.++.   ......+.+||.+++.+.|||++.+++++.+..++|++.
T Consensus        12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl   91 (786)
T KOG0588|consen   12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL   91 (786)
T ss_pred             cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence            458899999999999999999 6789999999998772   233456778999999999999999999999999999999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc----------------------c
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI----------------------Q  165 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~----------------------~  165 (263)
                      ||+++|-|.+++...+. +++..+.+++.||+.|+.|||..+|+|||+||+|.+++.                      +
T Consensus        92 Eyv~gGELFdylv~kG~-l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gklLeT  170 (786)
T KOG0588|consen   92 EYVPGGELFDYLVRKGP-LPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKLLET  170 (786)
T ss_pred             EecCCchhHHHHHhhCC-CCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecccCCccccc
Confidence            99999999999987665 888899999999999999999999999999999999432                      3


Q ss_pred             ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccc
Q 039276          166 TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHF  232 (263)
Q Consensus       166 ~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (263)
                      .+|++.|.+|             ||||+|||||.|+||+.||++     +.+.                ..+.+...+.+
T Consensus       171 SCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD-----dNir----------------~LLlKV~~G~f  229 (786)
T KOG0588|consen  171 SCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD-----DNIR----------------VLLLKVQRGVF  229 (786)
T ss_pred             cCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC-----ccHH----------------HHHHHHHcCcc
Confidence            4799999999             999999999999999999972     1222                12233344455


Q ss_pred             cchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          233 MTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       233 ~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ..+..+++++.+|+++|+..||+.|+|++||
T Consensus       230 ~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI  260 (786)
T KOG0588|consen  230 EMPSNISSEAQDLLRRMLDVDPSTRITTEEI  260 (786)
T ss_pred             cCCCcCCHHHHHHHHHHhccCccccccHHHH
Confidence            6788999999999999999999999999875

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2e-38  Score=262.28  Aligned_cols=223  Identities=24%  Similarity=0.295  Sum_probs=183.2

Q ss_pred             ccccccccceecccCceEEEEEE-ecCCceEEEEEeecCCCc-hHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           30 GLFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGG-AFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        30 ~~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~-~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      ....|+..+.||.|..+.||+|+ ...+..||||++..+... +.+.+.+|+..++.++||||++++..|..+..+++||
T Consensus        24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVm  103 (516)
T KOG0582|consen   24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVM  103 (516)
T ss_pred             CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEee
Confidence            34679999999999999999998 667899999999887543 4688999999999999999999999999999999999


Q ss_pred             eccCCCCHhhhhhhC-CCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc---------------------
Q 039276          108 ECMPHGSLGKCLSTS-NYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ---------------------  165 (263)
Q Consensus       108 e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~---------------------  165 (263)
                      .+|.+|++.+.++.. ..++++..+..|+.++++||.|||.+|.+|||+|+.|||++++                     
T Consensus       104 pfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~  183 (516)
T KOG0582|consen  104 PFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQ  183 (516)
T ss_pred             hhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeecccCcee
Confidence            999999999999863 2338999999999999999999999999999999999995442                     


Q ss_pred             ------ccccccccCc--------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccc
Q 039276          166 ------TLATISYMAP--------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLL  225 (263)
Q Consensus       166 ------~~g~~~y~aP--------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (263)
                            .+|++.||||              ||||||++++||.+|..||..+......+..+.+. .+...+...+... 
T Consensus       184 ~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~-pp~~~t~~~~~d~-  261 (516)
T KOG0582|consen  184 VTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQND-PPTLLTSGLDKDE-  261 (516)
T ss_pred             eEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCC-CCCcccccCChHH-
Confidence                  3689999999              99999999999999999998765544433333222 2211122222211 


Q ss_pred             ccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          226 SREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       226 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                               ....+..++.++..||+.||++|||++++
T Consensus       262 ---------~k~~~ksf~e~i~~CL~kDP~kRptAskL  290 (516)
T KOG0582|consen  262 ---------DKKFSKSFREMIALCLVKDPSKRPTASKL  290 (516)
T ss_pred             ---------hhhhcHHHHHHHHHHhhcCcccCCCHHHH
Confidence                     23344469999999999999999999874

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=2e-39  Score=256.64  Aligned_cols=228  Identities=18%  Similarity=0.227  Sum_probs=174.5

Q ss_pred             cccccceecccCceEEEEEE-ecCCceEEEEEeecCCC--chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           33 LFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYG--GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~--~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      .|+...++|+|+||.||+|+ ..+|+-||||+|..++.  .-.+-.++||+++++++|+|+|.++++|.....+++|+||
T Consensus         3 kYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~   82 (396)
T KOG0593|consen    3 KYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEY   82 (396)
T ss_pred             HHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeee
Confidence            58999999999999999999 56699999999976643  2344567899999999999999999999999999999999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-----------------------cc
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-----------------------QT  166 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-----------------------~~  166 (263)
                      |.. ++-+-+.....+.+...+..++.|++.|+.|+|+++++||||||+||++..                       +.
T Consensus        83 ~dh-TvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YTDY  161 (396)
T KOG0593|consen   83 CDH-TVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYTDY  161 (396)
T ss_pred             cch-HHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCCcchhhhh
Confidence            977 777777776666999999999999999999999999999999999999543                       23


Q ss_pred             cccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhh--cCCCchhhhhhhccc------
Q 039276          167 LATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVND--LLPNSVMKVVSANLL------  225 (263)
Q Consensus       167 ~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~------  225 (263)
                      +.|.+|+||             ||||+||++.||++|.+-|.....-+ .+...+..  ....+..++......      
T Consensus       162 VATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiD-QLy~I~ktLG~L~prhq~iF~~N~~F~Gv~l  240 (396)
T KOG0593|consen  162 VATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDID-QLYLIRKTLGNLIPRHQSIFSSNPFFHGVRL  240 (396)
T ss_pred             hhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHH-HHHHHHHHHcccCHHHHHHhccCCceeeeec
Confidence            568889999             99999999999999999886432111 11111111  111222222222110      


Q ss_pred             ----ccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          226 ----SREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       226 ----~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                          ..++.+ ...+.++.-+.+++..||..||.+|++.+|+
T Consensus       241 P~~~~~epLe-~k~p~~s~~~ld~~k~cL~~dP~~R~sc~ql  281 (396)
T KOG0593|consen  241 PEPEHPEPLE-RKYPKISNVLLDLLKKCLKMDPDDRLSCEQL  281 (396)
T ss_pred             CCCCCccchh-hhcccchHHHHHHHHHHhcCCccccccHHHH
Confidence                000000 1124556679999999999999999998764

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=9.3e-40  Score=272.03  Aligned_cols=229  Identities=18%  Similarity=0.168  Sum_probs=175.5

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCCCchHH-HHHHHHHHHhhcC-CCcceeEeeEeecCC-eeEEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFK-NLDVECNMMKIIR-HQNLIKIISSCSKDD-FKALIL  107 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~~~~-~~~~e~~~l~~~~-h~~i~~~~~~~~~~~-~~~lv~  107 (263)
                      .+|...++||.|.||.||+|. ..++..||||..+.+-....+ .-.+|+..|++++ ||||+++.+++.+.. .+|+||
T Consensus        10 ~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVf   89 (538)
T KOG0661|consen   10 DRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVF   89 (538)
T ss_pred             HHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeH
Confidence            469999999999999999999 667899999998766332222 2347999999998 999999999998887 899999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc----------------------c
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI----------------------Q  165 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~----------------------~  165 (263)
                      |||.. +|.++++.+++.++++.+..|+.||++||+|+|.+|+-|||+||||||...                      .
T Consensus        90 E~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpPYTe  168 (538)
T KOG0661|consen   90 EFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRSKPPYTE  168 (538)
T ss_pred             Hhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEecccccccccccCCCcch
Confidence            99966 999999998888999999999999999999999999999999999999662                      2


Q ss_pred             ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhh-----hhhhccccc
Q 039276          166 TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMK-----VVSANLLSR  227 (263)
Q Consensus       166 ~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~  227 (263)
                      .+.|.+|+||             ||||+|||++|+.+-++.|....+-+..+ +.-..........     .....+.-.
T Consensus       169 YVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~-KIc~VLGtP~~~~~~eg~~La~~mnf~  247 (538)
T KOG0661|consen  169 YVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIY-KICEVLGTPDKDSWPEGYNLASAMNFR  247 (538)
T ss_pred             hhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHH-HHHHHhCCCccccchhHHHHHHHhccC
Confidence            3568999999             99999999999999999886542222211 1111111111111     111111111


Q ss_pred             ----ccccc-cchHHHHHHHHHhhccccccCcCCCCCccC
Q 039276          228 ----EDEHF-MTKEQCMSFVFNLAMECTVESPNQRINAKE  262 (263)
Q Consensus       228 ----~~~~~-~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~e  262 (263)
                          .+... .....+++++.+++.+|+.+||.+||||+|
T Consensus       248 ~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~  287 (538)
T KOG0661|consen  248 FPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQ  287 (538)
T ss_pred             CCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHH
Confidence                00000 011347888999999999999999999976

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.1e-39  Score=255.74  Aligned_cols=212  Identities=19%  Similarity=0.271  Sum_probs=170.6

Q ss_pred             cccccccccceecccCceEEEEEE-ecCCceEEEEEeecC--CCchHHHHHHHHHHHhhcCCCcceeEeeE-eecCCe-e
Q 039276           29 SGLFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQ--YGGAFKNLDVECNMMKIIRHQNLIKIISS-CSKDDF-K  103 (263)
Q Consensus        29 ~~~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~-~~~~~~-~  103 (263)
                      ....+|...++||.|+||.||++. ..+|..+|.|.++..  +...++.+..||.+|++++||||++++++ +.+++. +
T Consensus        16 ~~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evl   95 (375)
T KOG0591|consen   16 KTLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVL   95 (375)
T ss_pred             ccHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhh
Confidence            345679999999999999999998 778999999999754  34567778899999999999999999994 444444 8


Q ss_pred             EEEEeccCCCCHhhhhhh---CCCcccHHHHHHHHHHHHHHHHHhcc--CC--ccccccCCCccccccc-----------
Q 039276          104 ALILECMPHGSLGKCLST---SNYILDFFQRLHIMIDVASAVEYLHF--GH--STHLLLKEDQSLTQIQ-----------  165 (263)
Q Consensus       104 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lH~--~~--i~h~dlk~~nil~~~~-----------  165 (263)
                      +|+||+|..|+|...++.   ..+.+++..+|+++.|++.||..+|.  ..  +.||||||.||+++.+           
T Consensus        96 nivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~  175 (375)
T KOG0591|consen   96 NIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLG  175 (375)
T ss_pred             HHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhH
Confidence            999999999999998863   44559999999999999999999998  44  8999999999995543           


Q ss_pred             ------------ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhh
Q 039276          166 ------------TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVS  221 (263)
Q Consensus       166 ------------~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (263)
                                  .+||+.||+|            ||||+||++|||+.-.+||..-    ..+ .+-        .++..
T Consensus       176 r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~----n~~-~L~--------~KI~q  242 (375)
T KOG0591|consen  176 RFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD----NLL-SLC--------KKIEQ  242 (375)
T ss_pred             hHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc----cHH-HHH--------HHHHc
Confidence                        3799999999            9999999999999999998632    111 110        11111


Q ss_pred             hcccccccccccch-HHHHHHHHHhhccccccCcCCCCCc
Q 039276          222 ANLLSREDEHFMTK-EQCMSFVFNLAMECTVESPNQRINA  260 (263)
Q Consensus       222 ~~~~~~~~~~~~~~-~~~~~~l~~l~~~cl~~~p~~Rpt~  260 (263)
                      .       ..++.+ .-.+.++..++..|+..||..||+.
T Consensus       243 g-------d~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t  275 (375)
T KOG0591|consen  243 G-------DYPPLPDEHYSTDLRELINMCIAVDPEQRPDT  275 (375)
T ss_pred             C-------CCCCCcHHHhhhHHHHHHHHHccCCcccCCCc
Confidence            1       111123 5667889999999999999999984

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.4e-39  Score=272.78  Aligned_cols=216  Identities=24%  Similarity=0.332  Sum_probs=182.7

Q ss_pred             ccccccccccceecccCceEEEEEE-ecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEE
Q 039276           28 FSGLFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALI  106 (263)
Q Consensus        28 ~~~~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv  106 (263)
                      .+....|....++|+|+.|.||.+. ..+++.||||.+.........-+.+|+.+++..+|+|||.+++.+.....+++|
T Consensus       269 ~dP~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVV  348 (550)
T KOG0578|consen  269 GDPRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVV  348 (550)
T ss_pred             CChhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEE
Confidence            3445679999999999999999999 677999999999998777778889999999999999999999999888899999


Q ss_pred             EeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccc-----------------------
Q 039276          107 LECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQ-----------------------  163 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~-----------------------  163 (263)
                      |||+++|+|.+.+....  +++.++..|..++++||+|||.+||+|||||.+||++.                       
T Consensus       349 MEym~ggsLTDvVt~~~--~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR  426 (550)
T KOG0578|consen  349 MEYMEGGSLTDVVTKTR--MTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKR  426 (550)
T ss_pred             EeecCCCchhhhhhccc--ccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccccCcc
Confidence            99999999999987543  89999999999999999999999999999999999943                       


Q ss_pred             ccccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccc
Q 039276          164 IQTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEH  231 (263)
Q Consensus       164 ~~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (263)
                      ++.+||+.||||            ||||||+++.||+-|.+||-.    +..+..+.          ++-    .....+
T Consensus       427 ~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYln----E~PlrAly----------LIa----~ng~P~  488 (550)
T KOG0578|consen  427 STMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLN----ENPLRALY----------LIA----TNGTPK  488 (550)
T ss_pred             ccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccC----CChHHHHH----------HHh----hcCCCC
Confidence            345899999999            999999999999999999852    22222111          110    011111


Q ss_pred             ccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          232 FMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       232 ~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ...+..+++++++++.+||+.|+++|+++.||
T Consensus       489 lk~~~klS~~~kdFL~~cL~~dv~~RasA~eL  520 (550)
T KOG0578|consen  489 LKNPEKLSPELKDFLDRCLVVDVEQRASAKEL  520 (550)
T ss_pred             cCCccccCHHHHHHHHHHhhcchhcCCCHHHH
Confidence            22467788899999999999999999999875

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.5e-38  Score=266.63  Aligned_cols=232  Identities=20%  Similarity=0.200  Sum_probs=177.3

Q ss_pred             cccccccccceecccCceEEEEEE-ecCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecC--Cee
Q 039276           29 SGLFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKD--DFK  103 (263)
Q Consensus        29 ~~~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~--~~~  103 (263)
                      ...+.|+..++||+|.||.||+|+ ..+|+.||+|++..+.  .+...-..+||.+|++++||||+++.+...+.  +.+
T Consensus       114 r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~si  193 (560)
T KOG0600|consen  114 RRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSI  193 (560)
T ss_pred             cchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceE
Confidence            344679999999999999999999 6779999999998774  44556677899999999999999999988665  789


Q ss_pred             EEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-------------------
Q 039276          104 ALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-------------------  164 (263)
Q Consensus       104 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-------------------  164 (263)
                      |+|+|||+. +|.-++....-.+++.+++.++.|++.||+|||.+|+.|||||..|||++.                   
T Consensus       194 YlVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~  272 (560)
T KOG0600|consen  194 YLVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSG  272 (560)
T ss_pred             EEEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCC
Confidence            999999988 999999887767999999999999999999999999999999999999543                   


Q ss_pred             -----cccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhc---
Q 039276          165 -----QTLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSAN---  223 (263)
Q Consensus       165 -----~~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  223 (263)
                           +.+.|.+|+||             |+||.|||+.||++|++.|....+- ..+......-.......+-...   
T Consensus       273 ~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEv-eQl~kIfklcGSP~e~~W~~~kLP~  351 (560)
T KOG0600|consen  273 SAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEV-EQLHKIFKLCGSPTEDYWPVSKLPH  351 (560)
T ss_pred             CcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHH-HHHHHHHHHhCCCChhccccccCCc
Confidence                 33569999999             9999999999999999998642110 1111111111111000010000   


Q ss_pred             ---cccccccc---ccchHHHHHHHHHhhccccccCcCCCCCccC
Q 039276          224 ---LLSREDEH---FMTKEQCMSFVFNLAMECTVESPNQRINAKE  262 (263)
Q Consensus       224 ---~~~~~~~~---~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~e  262 (263)
                         +.+....+   .......++...+|+..+|..||.+|.||.+
T Consensus       352 ~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~  396 (560)
T KOG0600|consen  352 ATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASS  396 (560)
T ss_pred             ccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHH
Confidence               00000000   0123455677899999999999999999865

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3.6e-39  Score=247.40  Aligned_cols=212  Identities=22%  Similarity=0.266  Sum_probs=179.3

Q ss_pred             cccccccceecccCceEEEEEE-ecCCceEEEEEeecCC---CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEE
Q 039276           31 LFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALI  106 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv  106 (263)
                      .++|+.+++||+|.||.||.|+ ..++.-||+|++.+++   .+...++.+||++...++||||++++++|.+....|++
T Consensus        21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi  100 (281)
T KOG0580|consen   21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI  100 (281)
T ss_pred             hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence            3679999999999999999999 6678889999997663   34567788999999999999999999999999999999


Q ss_pred             EeccCCCCHhhhhhhCCC-cccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc---------------------
Q 039276          107 LECMPHGSLGKCLSTSNY-ILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI---------------------  164 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~---------------------  164 (263)
                      +||.++|.+...++.+.. .+++...+.++.|++.||.|+|.++++||||||+|+|+++                     
T Consensus       101 lEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~kR~  180 (281)
T KOG0580|consen  101 LEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSNKRK  180 (281)
T ss_pred             EEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecCCCCce
Confidence            999999999999985433 3888899999999999999999999999999999999543                     


Q ss_pred             cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccc
Q 039276          165 QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHF  232 (263)
Q Consensus       165 ~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (263)
                      +..||..|++|            |+|++|+++||++.|.+||.... .++.+.....                    .+.
T Consensus       181 tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~-~~etYkrI~k--------------------~~~  239 (281)
T KOG0580|consen  181 TLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS-HSETYKRIRK--------------------VDL  239 (281)
T ss_pred             eeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh-hHHHHHHHHH--------------------ccc
Confidence            34789999999            99999999999999999997543 2222222211                    111


Q ss_pred             cchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          233 MTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       233 ~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ..+..++.++.++|.+|+..+|.+|.+..|+
T Consensus       240 ~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v  270 (281)
T KOG0580|consen  240 KFPSTISGGAADLISRLLVKNPIERLALTEV  270 (281)
T ss_pred             cCCcccChhHHHHHHHHhccCccccccHHHH
Confidence            2356777889999999999999999987664

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=100.00  E-value=5.8e-38  Score=244.16  Aligned_cols=228  Identities=20%  Similarity=0.231  Sum_probs=179.3

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEe
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      .+|...+.+|+|.||.||+|+ .++|+.||||+++...  .+......+||.+|+.++|+||+.+++.|...+...+|+|
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE   81 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE   81 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence            469999999999999999999 6789999999998763  3335567789999999999999999999998888999999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc----------------------
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT----------------------  166 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~----------------------  166 (263)
                      |++. +|...++.....+...+++.++.++++|++|||.+.|.|||+||.|+|.++++                      
T Consensus        82 fm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~~  160 (318)
T KOG0659|consen   82 FMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQTH  160 (318)
T ss_pred             eccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCccccc
Confidence            9987 99999998887799999999999999999999999999999999999966533                      


Q ss_pred             -cccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcc--------
Q 039276          167 -LATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANL--------  224 (263)
Q Consensus       167 -~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------  224 (263)
                       +.|..|+||             ||||.|||+.||+.|.+-|... .+-+.+....+......-..+-+..-        
T Consensus       161 ~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~-sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~  239 (318)
T KOG0659|consen  161 QVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGD-SDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQ  239 (318)
T ss_pred             ceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCC-chHHHHHHHHHHcCCCCcccCccccccccHHHHh
Confidence             457889999             9999999999999887765421 11122222333333322222221111        


Q ss_pred             -cccccccccchHHHHHHHHHhhccccccCcCCCCCccC
Q 039276          225 -LSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKE  262 (263)
Q Consensus       225 -~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~e  262 (263)
                       .+..... .....+++++.+|+..|+..||.+|+|++|
T Consensus       240 ~~P~~~~~-~lf~aas~d~ldLl~~m~~ynP~~Rita~q  277 (318)
T KOG0659|consen  240 QFPKPPLN-NLFPAASSDALDLLSKMLTYNPKKRITASQ  277 (318)
T ss_pred             cCCCCccc-cccccccHHHHHHHHhhhccCchhcccHHH
Confidence             1111111 134566778899999999999999999976

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=100.00  E-value=8.4e-38  Score=263.90  Aligned_cols=211  Identities=21%  Similarity=0.272  Sum_probs=174.8

Q ss_pred             ccccccccceecccCceEEEEEE-ecCCceEEEEEeecC---CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEE
Q 039276           30 GLFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQ---YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKAL  105 (263)
Q Consensus        30 ~~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l  105 (263)
                      +.++|+.+..||+|+||.||+|+ ..+|.-+|+|+++++   ..+..+.+..|=.+|...+++.||+++-.|++...+||
T Consensus       139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL  218 (550)
T KOG0605|consen  139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL  218 (550)
T ss_pred             CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence            45779999999999999999999 566999999999876   34456667778889999999999999999999999999


Q ss_pred             EEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc---------------------
Q 039276          106 ILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI---------------------  164 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~---------------------  164 (263)
                      ||||+|||+++.+|...+. +++..+..++.+++.|++.||..|++||||||+|+|++.                     
T Consensus       219 iMEylPGGD~mTLL~~~~~-L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~  297 (550)
T KOG0605|consen  219 IMEYLPGGDMMTLLMRKDT-LTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRI  297 (550)
T ss_pred             EEEecCCccHHHHHHhcCc-CchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhhhhh
Confidence            9999999999999987655 899999999999999999999999999999999999211                     


Q ss_pred             -------------------------------------------------cccccccccCc------------chhhHHHH
Q 039276          165 -------------------------------------------------QTLATISYMAP------------DTYNFGIM  183 (263)
Q Consensus       165 -------------------------------------------------~~~g~~~y~aP------------Dv~SlG~i  183 (263)
                                                                       ..+|||-|+||            |.||||||
T Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~I  377 (550)
T KOG0605|consen  298 ESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCI  377 (550)
T ss_pred             hhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHH
Confidence                                                             22789999999            99999999


Q ss_pred             HHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCC
Q 039276          184 IMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRIN  259 (263)
Q Consensus       184 l~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt  259 (263)
                      +|||+.|.+||..-.. ...+.            ++    +.......+|....+++++.+||.+|+. ||.+|.-
T Consensus       378 myEmLvGyPPF~s~tp-~~T~r------------kI----~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG  435 (550)
T KOG0605|consen  378 MYEMLVGYPPFCSETP-QETYR------------KI----VNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLG  435 (550)
T ss_pred             HHHHHhCCCCCCCCCH-HHHHH------------HH----HHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcC
Confidence            9999999999863211 11111            11    2222233344455666889999999999 9999975

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=100.00  E-value=1.9e-38  Score=269.11  Aligned_cols=207  Identities=23%  Similarity=0.321  Sum_probs=174.8

Q ss_pred             cccccceecccCceEEEEEE-ecCCceEEEEEeecC--CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           33 LFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQ--YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      .|...+.+|+|+||.||+|+ ..+.+.||+|.+.+.  ..++.+.+.+|+++++.++||||+.++++|++..+.++|+||
T Consensus         3 ~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~   82 (808)
T KOG0597|consen    3 QYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEY   82 (808)
T ss_pred             chhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehh
Confidence            47888899999999999999 566889999999765  334567788999999999999999999999999999999999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-----------------------cc
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-----------------------QT  166 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-----------------------~~  166 (263)
                      +.+ +|..++...+. ++++.+..++.+++.||.|||+.+|.|||+||+||++..                       ..
T Consensus        83 a~g-~L~~il~~d~~-lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vltsi  160 (808)
T KOG0597|consen   83 AVG-DLFTILEQDGK-LPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLTSI  160 (808)
T ss_pred             hhh-hHHHHHHhccC-CCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccCceeeeec
Confidence            977 99999987665 999999999999999999999999999999999999432                       34


Q ss_pred             cccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccc
Q 039276          167 LATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT  234 (263)
Q Consensus       167 ~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (263)
                      .||+.||||            |+||+||++||+++|++||..                 +.+..++........    .-
T Consensus       161 kGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a-----------------~si~~Lv~~I~~d~v----~~  219 (808)
T KOG0597|consen  161 KGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYA-----------------RSITQLVKSILKDPV----KP  219 (808)
T ss_pred             cCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchH-----------------HHHHHHHHHHhcCCC----CC
Confidence            799999999            999999999999999999853                 122333333222111    11


Q ss_pred             hHHHHHHHHHhhccccccCcCCCCCccC
Q 039276          235 KEQCMSFVFNLAMECTVESPNQRINAKE  262 (263)
Q Consensus       235 ~~~~~~~l~~l~~~cl~~~p~~Rpt~~e  262 (263)
                      +...+..+.+++.-.|..||.+|.|..+
T Consensus       220 p~~~S~~f~nfl~gLL~kdP~~RltW~~  247 (808)
T KOG0597|consen  220 PSTASSSFVNFLQGLLIKDPAQRLTWTD  247 (808)
T ss_pred             cccccHHHHHHHHHHhhcChhhcccHHH
Confidence            3477788999999999999999998754

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-37  Score=259.75  Aligned_cols=212  Identities=22%  Similarity=0.302  Sum_probs=170.2

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCC--------------CchHHHHHHHHHHHhhcCCCcceeEeeE
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY--------------GGAFKNLDVECNMMKIIRHQNLIKIISS   96 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~--------------~~~~~~~~~e~~~l~~~~h~~i~~~~~~   96 (263)
                      .-|+....||+|.||+|-+|+ ..+++.||+|++.+..              ....+...+||.+++++.|+|||+++++
T Consensus        97 Nqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEv  176 (576)
T KOG0585|consen   97 NQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEV  176 (576)
T ss_pred             hheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEe
Confidence            459999999999999999999 5569999999997542              1123567789999999999999999999


Q ss_pred             eecC--CeeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc---------
Q 039276           97 CSKD--DFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ---------  165 (263)
Q Consensus        97 ~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~---------  165 (263)
                      ..+.  ..+|+|+|||..|.+...-. ....+.+.++++++.+++.||+|||.+||+||||||+|+|+++.         
T Consensus       177 LDDP~s~~~YlVley~s~G~v~w~p~-d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VKIsDFG  255 (576)
T KOG0585|consen  177 LDDPESDKLYLVLEYCSKGEVKWCPP-DKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVKISDFG  255 (576)
T ss_pred             ecCcccCceEEEEEeccCCccccCCC-CcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEEeeccc
Confidence            9775  57899999999877664332 22228889999999999999999999999999999999995432         


Q ss_pred             -------------------ccccccccCc----------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhh
Q 039276          166 -------------------TLATISYMAP----------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVND  210 (263)
Q Consensus       166 -------------------~~g~~~y~aP----------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~  210 (263)
                                         .+||+.|+||                ||||+||+||.|+.|+.||..    +..+      
T Consensus       256 Vs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~----~~~~------  325 (576)
T KOG0585|consen  256 VSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFD----DFEL------  325 (576)
T ss_pred             eeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCccc----chHH------
Confidence                               3689999999                999999999999999999853    1111      


Q ss_pred             cCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          211 LLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                         ....+++...      ..++..+++.+++.+|+.+||..||++|++..+|
T Consensus       326 ---~l~~KIvn~p------L~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~i  369 (576)
T KOG0585|consen  326 ---ELFDKIVNDP------LEFPENPEINEDLKDLIKRLLEKDPEQRITLPDI  369 (576)
T ss_pred             ---HHHHHHhcCc------ccCCCcccccHHHHHHHHHHhhcChhheeehhhh
Confidence               1122233222      2233445677889999999999999999998775

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=6.1e-38  Score=247.43  Aligned_cols=208  Identities=20%  Similarity=0.217  Sum_probs=176.2

Q ss_pred             cccccccccceecccCceEEEEEE-ecCCceEEEEEeecCC---CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeE
Q 039276           29 SGLFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKA  104 (263)
Q Consensus        29 ~~~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~  104 (263)
                      -..++|+....||.|+||.|.+.+ ..+|..+|+|++++..   -...+...+|-.+|+.+.||+++++++.+.+....|
T Consensus        41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~ly  120 (355)
T KOG0616|consen   41 YSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLY  120 (355)
T ss_pred             cchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEE
Confidence            445779999999999999999999 6678999999998763   234556778999999999999999999999999999


Q ss_pred             EEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc------------------
Q 039276          105 LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT------------------  166 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~------------------  166 (263)
                      +||||.+||-|..++++.++ +++..+..++.||+.||+|||+++|++|||||+|||++.++                  
T Consensus       121 mvmeyv~GGElFS~Lrk~~r-F~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT~  199 (355)
T KOG0616|consen  121 MVMEYVPGGELFSYLRKSGR-FSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRTW  199 (355)
T ss_pred             EEEeccCCccHHHHHHhcCC-CCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEecCcEE
Confidence            99999999999999988766 89999999999999999999999999999999999976543                  


Q ss_pred             --cccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccc
Q 039276          167 --LATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHF  232 (263)
Q Consensus       167 --~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (263)
                        .||+.|+||            |-|||||++|||+.|.+||.....                 ..+..+.+..    ..
T Consensus       200 TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~-----------------~~iY~KI~~~----~v  258 (355)
T KOG0616|consen  200 TLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP-----------------IQIYEKILEG----KV  258 (355)
T ss_pred             EecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh-----------------HHHHHHHHhC----cc
Confidence              699999999            999999999999999999864211                 1222222111    11


Q ss_pred             cchHHHHHHHHHhhccccccCcCCCC
Q 039276          233 MTKEQCMSFVFNLAMECTVESPNQRI  258 (263)
Q Consensus       233 ~~~~~~~~~l~~l~~~cl~~~p~~Rp  258 (263)
                      .+|.-.++++.+|+.++|+.|-.+|.
T Consensus       259 ~fP~~fs~~~kdLl~~LL~vD~t~R~  284 (355)
T KOG0616|consen  259 KFPSYFSSDAKDLLKKLLQVDLTKRF  284 (355)
T ss_pred             cCCcccCHHHHHHHHHHHhhhhHhhh
Confidence            24666777899999999999999883

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-38  Score=274.98  Aligned_cols=208  Identities=22%  Similarity=0.375  Sum_probs=177.3

Q ss_pred             ceecccCceEEEEEE-ecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccCCCCHh
Q 039276           38 NLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLG  116 (263)
Q Consensus        38 ~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~  116 (263)
                      -.||+|.+|+||-|+ ..+...+|||.+..+.....+.+.+||.+++.++|.|||+++|.+..+++.-|+||.+|||+|.
T Consensus       581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS  660 (1226)
T KOG4279|consen  581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS  660 (1226)
T ss_pred             EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence            379999999999999 4557789999999888888999999999999999999999999999999999999999999999


Q ss_pred             hhhhhCCCc--ccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccc------------------------ccccccc
Q 039276          117 KCLSTSNYI--LDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQ------------------------IQTLATI  170 (263)
Q Consensus       117 ~~l~~~~~~--~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~------------------------~~~~g~~  170 (263)
                      ++++..=+.  -++..+..+-.||++||.|||+..|||||||.+|++.+                        .+..||.
T Consensus       661 sLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTGTL  740 (1226)
T KOG4279|consen  661 SLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTGTL  740 (1226)
T ss_pred             HHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccCCccccccccch
Confidence            999864333  37888999999999999999999999999999999943                        2457899


Q ss_pred             cccCc--------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchH
Q 039276          171 SYMAP--------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKE  236 (263)
Q Consensus       171 ~y~aP--------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (263)
                      .||||              |||||||++.||.||++||.......               .......+.+   ..++.+.
T Consensus       741 QYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgspq---------------AAMFkVGmyK---vHP~iPe  802 (1226)
T KOG4279|consen  741 QYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQ---------------AAMFKVGMYK---VHPPIPE  802 (1226)
T ss_pred             hhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChh---------------Hhhhhhccee---cCCCCcH
Confidence            99999              99999999999999999997532211               1111122222   2345688


Q ss_pred             HHHHHHHHhhccccccCcCCCCCccCC
Q 039276          237 QCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       237 ~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +++.++.+++++|+.++|.+||++.++
T Consensus       803 elsaeak~FilrcFepd~~~R~sA~~L  829 (1226)
T KOG4279|consen  803 ELSAEAKNFILRCFEPDPCDRPSAKDL  829 (1226)
T ss_pred             HHHHHHHHHHHHHcCCCcccCccHHHh
Confidence            999999999999999999999999864

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=100.00  E-value=2.7e-38  Score=243.83  Aligned_cols=215  Identities=19%  Similarity=0.248  Sum_probs=176.1

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecC-----CeeEE
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKD-----DFKAL  105 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-----~~~~l  105 (263)
                      .+|...+.||.|+|+.|+++. ..++..+|+|++.+...++.+...+|++..++++|||+++++++...+     ...|+
T Consensus        21 ~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yl  100 (302)
T KOG2345|consen   21 KRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYL  100 (302)
T ss_pred             ceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEE
Confidence            459999999999999999998 777899999999999878888999999999999999999999887543     35899


Q ss_pred             EEeccCCCCHhhhhhhC---CCcccHHHHHHHHHHHHHHHHHhccCC--ccccccCCCcccccccc--------------
Q 039276          106 ILECMPHGSLGKCLSTS---NYILDFFQRLHIMIDVASAVEYLHFGH--STHLLLKEDQSLTQIQT--------------  166 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~--i~h~dlk~~nil~~~~~--------------  166 (263)
                      ++.|...|+|.+.+...   +..+++.++++|+.+++.||++||+..  +.||||||.||+....+              
T Consensus       101 l~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~  180 (302)
T KOG2345|consen  101 LLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQAP  180 (302)
T ss_pred             EeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCccccc
Confidence            99999999999988753   223899999999999999999999999  99999999999955421              


Q ss_pred             ------------------cccccccCc---------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCC
Q 039276          167 ------------------LATISYMAP---------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLP  213 (263)
Q Consensus       167 ------------------~g~~~y~aP---------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~  213 (263)
                                        .+|..|+||               |||||||+||+|+.|..||........++.        
T Consensus       181 i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSla--------  252 (302)
T KOG2345|consen  181 IQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLA--------  252 (302)
T ss_pred             eEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEE--------
Confidence                              468889999               999999999999999999975433222221        


Q ss_pred             CchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          214 NSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                         ..+....+...      ...-.++.+.+++..|++.||.+||++.+|
T Consensus       253 ---LAv~n~q~s~P------~~~~yse~l~~lik~mlqvdP~qRP~i~~l  293 (302)
T KOG2345|consen  253 ---LAVQNAQISIP------NSSRYSEALHQLIKSMLQVDPNQRPTIPEL  293 (302)
T ss_pred             ---EeeeccccccC------CCCCccHHHHHHHHHHhcCCcccCCCHHHH
Confidence               11222122111      122267779999999999999999998764

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=2.9e-37  Score=258.55  Aligned_cols=232  Identities=17%  Similarity=0.181  Sum_probs=170.2

Q ss_pred             cccccccceecccCceEEEEEEe-cCCceEEEEEeecCCC-chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEe
Q 039276           31 LFLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYG-GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      .++|+..+.||+|+||.||+|.. .+++.||+|++..... .......+|+.+++.++|+||+++++++.+....+++||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   83 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE   83 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence            45699999999999999999994 4688999999975532 233456789999999999999999999999999999999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------  165 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------  165 (263)
                      |++ ++|.+++......+++..+..++.|++.||+|||+++++|+||||+||+....                       
T Consensus        84 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~  162 (303)
T cd07869          84 YVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYSN  162 (303)
T ss_pred             CCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCCccCCC
Confidence            996 58888887665558889999999999999999999999999999999985321                       


Q ss_pred             ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhh---hh-----h-c
Q 039276          166 TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKV---VS-----A-N  223 (263)
Q Consensus       166 ~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----~-~  223 (263)
                      ..+++.|+||             |||||||++|||++|+.||.........+...............   ..     . .
T Consensus       163 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (303)
T cd07869         163 EVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPER  242 (303)
T ss_pred             CcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhcccccccc
Confidence            2457789999             99999999999999999997543222222221111110000000   00     0 0


Q ss_pred             c---cccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          224 L---LSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       224 ~---~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .   .+............++++.+++.+||+.||++|||+.|+
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~  285 (303)
T cd07869         243 FTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAA  285 (303)
T ss_pred             ccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHH
Confidence            0   000000000001234568899999999999999999864

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=4.5e-37  Score=255.61  Aligned_cols=229  Identities=16%  Similarity=0.204  Sum_probs=170.8

Q ss_pred             cccccccceecccCceEEEEEE-ecCCceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEe
Q 039276           31 LFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      ..+|...+.||.|+||.||+|. ..++..||+|.+.... ......+.+|+++++.++|+||+++++++.+....+++||
T Consensus         4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   83 (288)
T cd07871           4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFE   83 (288)
T ss_pred             cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEe
Confidence            4569999999999999999998 4568899999987543 2234567789999999999999999999998889999999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------  165 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------  165 (263)
                      |+++ +|.+++......++...+..++.|++.||+|||+++++||||||+||+.+.+                       
T Consensus        84 ~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~~~  162 (288)
T cd07871          84 YLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSN  162 (288)
T ss_pred             CCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCccccC
Confidence            9975 9999887655557888999999999999999999999999999999995431                       


Q ss_pred             ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcC---C---------Cchhhhh
Q 039276          166 TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLL---P---------NSVMKVV  220 (263)
Q Consensus       166 ~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~---~---------~~~~~~~  220 (263)
                      ..++..|+||             ||||+||++|+|++|+.||......+ .+........   .         .......
T Consensus       163 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (288)
T cd07871         163 EVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKE-ELHLIFRLLGTPTEETWPGITSNEEFRSYL  241 (288)
T ss_pred             ceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCChHHhhccccchhhhccc
Confidence            2457789999             99999999999999999986432111 1111111000   0         0000000


Q ss_pred             hhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          221 SANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .+.......  ......+++++.+++.+||+.||.+|||++|+
T Consensus       242 ~~~~~~~~~--~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~  282 (288)
T cd07871         242 FPQYRAQPL--INHAPRLDTDGIDLLSSLLLYETKSRISAEAA  282 (288)
T ss_pred             cCccCCCch--HHhCCCCCHHHHHHHHHhcCcCcccCCCHHHH
Confidence            000000000  00112456678999999999999999999874

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=8.8e-38  Score=260.28  Aligned_cols=205  Identities=19%  Similarity=0.221  Sum_probs=166.5

Q ss_pred             cccccceecccCceEEEEEEe-cCCceEEEEEeecCC---CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEe
Q 039276           33 LFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      +|+..+.||+|+||.||++.. .+++.||+|++....   ......+.+|+++++.++||||+++++.+.+....+++||
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   81 (291)
T cd05612           2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLME   81 (291)
T ss_pred             CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEe
Confidence            488899999999999999994 468999999997542   2334567889999999999999999999999999999999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc--------------------ccc
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ--------------------TLA  168 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~--------------------~~g  168 (263)
                      |+++++|.+++...+. +++..+..++.|++.||+|||+++++||||||+||+.+..                    ..|
T Consensus        82 ~~~~~~L~~~~~~~~~-~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~g  160 (291)
T cd05612          82 YVPGGELFSYLRNSGR-FSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTWTLCG  160 (291)
T ss_pred             CCCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCCcccccC
Confidence            9999999999976554 8889999999999999999999999999999999995432                    247


Q ss_pred             cccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchH
Q 039276          169 TISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKE  236 (263)
Q Consensus       169 ~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (263)
                      ++.|+||            |||||||++|+|++|+.||...... ......            ...        ....+.
T Consensus       161 t~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~-~~~~~i------------~~~--------~~~~~~  219 (291)
T cd05612         161 TPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPF-GIYEKI------------LAG--------KLEFPR  219 (291)
T ss_pred             ChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHH------------HhC--------CcCCCc
Confidence            8889999            9999999999999999998642110 000000            000        011233


Q ss_pred             HHHHHHHHhhccccccCcCCCCC
Q 039276          237 QCMSFVFNLAMECTVESPNQRIN  259 (263)
Q Consensus       237 ~~~~~l~~l~~~cl~~~p~~Rpt  259 (263)
                      .+++.+.+++.+||+.||.+||+
T Consensus       220 ~~~~~~~~li~~~l~~dp~~R~~  242 (291)
T cd05612         220 HLDLYAKDLIKKLLVVDRTRRLG  242 (291)
T ss_pred             cCCHHHHHHHHHHcCCCHHHccC
Confidence            44667999999999999999996

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=1.9e-39  Score=250.14  Aligned_cols=213  Identities=18%  Similarity=0.256  Sum_probs=177.2

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecC--CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEe
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQ--YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      +.|+..+.||+|.|+.|+++. ..+|+++++|+++..  .....+.+.+|+++.++++||||+++.+...+.++.|+|+|
T Consensus        11 d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe   90 (355)
T KOG0033|consen   11 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD   90 (355)
T ss_pred             hhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEe
Confidence            458999999999999999998 667999999998654  34477889999999999999999999999999999999999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc------------------------
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI------------------------  164 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~------------------------  164 (263)
                      ++.|++|..-+-.. ..+++..+...+.||+.+|.|+|.++|||||+||+|.++.+                        
T Consensus        91 ~m~G~dl~~eIV~R-~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~~  169 (355)
T KOG0033|consen   91 LVTGGELFEDIVAR-EFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEAW  169 (355)
T ss_pred             cccchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCCcccc
Confidence            99999997766544 33888889999999999999999999999999999999433                        


Q ss_pred             -cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccc
Q 039276          165 -QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEH  231 (263)
Q Consensus       165 -~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (263)
                       ..+||+.||||            |||+.||+||-|+.|..||..-                 ....+..........-.
T Consensus       170 ~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~-----------------~~~rlye~I~~g~yd~~  232 (355)
T KOG0033|consen  170 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE-----------------DQHRLYEQIKAGAYDYP  232 (355)
T ss_pred             ccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCc-----------------cHHHHHHHHhccccCCC
Confidence             34789999999            9999999999999999998631                 11222222222223333


Q ss_pred             ccchHHHHHHHHHhhccccccCcCCCCCccC
Q 039276          232 FMTKEQCMSFVFNLAMECTVESPNQRINAKE  262 (263)
Q Consensus       232 ~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~e  262 (263)
                      .+..+.+++++++|+++||..||++|+|+.|
T Consensus       233 ~~~w~~is~~Ak~LvrrML~~dP~kRIta~E  263 (355)
T KOG0033|consen  233 SPEWDTVTPEAKSLIRRMLTVNPKKRITADE  263 (355)
T ss_pred             CcccCcCCHHHHHHHHHHhccChhhhccHHH
Confidence            3446788889999999999999999999876

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=1.7e-37  Score=262.87  Aligned_cols=207  Identities=17%  Similarity=0.220  Sum_probs=168.3

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCC---CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      .+|+..+.||+|+||.||+|.. .+++.||+|++....   ....+.+.+|+.+++.++|+||+++++.+.+.+..+++|
T Consensus        18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   97 (329)
T PTZ00263         18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL   97 (329)
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence            4599999999999999999994 468999999997542   234556788999999999999999999999999999999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc--------------------cc
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ--------------------TL  167 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~--------------------~~  167 (263)
                      ||+++++|.+++..... +++..+..++.|++.||+|||+++++||||||+||+.+..                    ..
T Consensus        98 e~~~~~~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~  176 (329)
T PTZ00263         98 EFVVGGELFTHLRKAGR-FPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTFTLC  176 (329)
T ss_pred             cCCCCChHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCCcceec
Confidence            99999999999987554 7888899999999999999999999999999999995432                    24


Q ss_pred             ccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccch
Q 039276          168 ATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTK  235 (263)
Q Consensus       168 g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (263)
                      |++.|+||            |||||||++|||++|+.||....    ....+ .        .+...        +...+
T Consensus       177 gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~----~~~~~-~--------~i~~~--------~~~~p  235 (329)
T PTZ00263        177 GTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDT----PFRIY-E--------KILAG--------RLKFP  235 (329)
T ss_pred             CChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCC----HHHHH-H--------HHhcC--------CcCCC
Confidence            78889999            99999999999999999985321    11100 0        00000        01123


Q ss_pred             HHHHHHHHHhhccccccCcCCCCCc
Q 039276          236 EQCMSFVFNLAMECTVESPNQRINA  260 (263)
Q Consensus       236 ~~~~~~l~~l~~~cl~~~p~~Rpt~  260 (263)
                      ..++.++.+++.+||+.||.+||+.
T Consensus       236 ~~~~~~~~~li~~~L~~dP~~R~~~  260 (329)
T PTZ00263        236 NWFDGRARDLVKGLLQTDHTKRLGT  260 (329)
T ss_pred             CCCCHHHHHHHHHHhhcCHHHcCCC
Confidence            3356678999999999999999973

>PHA02988 hypothetical protein; Provisional

Probab=100.00  E-value=1.6e-36  Score=251.71  Aligned_cols=207  Identities=23%  Similarity=0.308  Sum_probs=164.4

Q ss_pred             ccceecccCceEEEEEEecCCceEEEEEeecCCCch---HHHHHHHHHHHhhcCCCcceeEeeEeec----CCeeEEEEe
Q 039276           36 ESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGA---FKNLDVECNMMKIIRHQNLIKIISSCSK----DDFKALILE  108 (263)
Q Consensus        36 ~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~---~~~~~~e~~~l~~~~h~~i~~~~~~~~~----~~~~~lv~e  108 (263)
                      ....+++|+++.||+|... ++.||+|.+.......   .+.+.+|+.++++++||||+++++++.+    ....+++||
T Consensus        24 ~~~~i~~g~~~~v~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~E  102 (283)
T PHA02988         24 TSVLIKENDQNSIYKGIFN-NKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILE  102 (283)
T ss_pred             CCeEEeeCCceEEEEEEEC-CEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEE
Confidence            3467899999999999885 8899999997653322   4567799999999999999999999866    356899999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhcc-CCccccccCCCccccccc--------------------cc
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHF-GHSTHLLLKEDQSLTQIQ--------------------TL  167 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~-~~i~h~dlk~~nil~~~~--------------------~~  167 (263)
                      |+++|+|.+++..... +++.....++.+++.||.|||. .+++||||||+||+.+.+                    ..
T Consensus       103 y~~~g~L~~~l~~~~~-~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~~~~~  181 (283)
T PHA02988        103 YCTRGYLREVLDKEKD-LSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPPFKNV  181 (283)
T ss_pred             eCCCCcHHHHHhhCCC-CChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhcccccccc
Confidence            9999999999987543 7888999999999999999997 489999999999995432                    24


Q ss_pred             ccccccCc--------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccccc
Q 039276          168 ATISYMAP--------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFM  233 (263)
Q Consensus       168 g~~~y~aP--------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (263)
                      |+..|+||              |||||||++|||++|+.||.....  ..+....           ..      ...+.+
T Consensus       182 ~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~--~~~~~~i-----------~~------~~~~~~  242 (283)
T PHA02988        182 NFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTT--KEIYDLI-----------IN------KNNSLK  242 (283)
T ss_pred             CcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCH--HHHHHHH-----------Hh------cCCCCC
Confidence            67789999              999999999999999999864311  1110000           00      001112


Q ss_pred             chHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          234 TKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       234 ~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .+..+++++.+++.+||+.||++|||++||
T Consensus       243 ~~~~~~~~l~~li~~cl~~dp~~Rps~~el  272 (283)
T PHA02988        243 LPLDCPLEIKCIVEACTSHDSIKRPNIKEI  272 (283)
T ss_pred             CCCcCcHHHHHHHHHHhcCCcccCcCHHHH
Confidence            233567789999999999999999999874

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=100.00  E-value=7.1e-37  Score=251.55  Aligned_cols=211  Identities=17%  Similarity=0.299  Sum_probs=168.1

Q ss_pred             cccccceecccCceEEEEEEec----CCceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           33 LFSESNLISRGGFGSIYKAKIQ----DGMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~~----~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      .|+..+.||+|+||.||+|.+.    .+..|++|.+.... ......+.+|+..++.++|||++++++++...+..+++|
T Consensus         6 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   85 (266)
T cd05064           6 SIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVT   85 (266)
T ss_pred             HeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEEE
Confidence            4888999999999999999742    35689999987653 233456788999999999999999999999989999999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc---------------------
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT---------------------  166 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~---------------------  166 (263)
                      ||+++++|.+++......+++..++.++.|++.||+|||+++++|+||||+||+...+.                     
T Consensus        86 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~~~  165 (266)
T cd05064          86 EYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTT  165 (266)
T ss_pred             EeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCcccccccccchhcc
Confidence            99999999999987555588999999999999999999999999999999999853321                     


Q ss_pred             ---cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccc
Q 039276          167 ---LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDE  230 (263)
Q Consensus       167 ---~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (263)
                         .++..|+||            |||||||++||+++ |+.||......  .+....            ..      ..
T Consensus       166 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~--~~~~~~------------~~------~~  225 (266)
T cd05064         166 MSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ--DVIKAV------------ED------GF  225 (266)
T ss_pred             cCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH--HHHHHH------------HC------CC
Confidence               234578999            99999999999875 99998643111  010000            00      01


Q ss_pred             cccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          231 HFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       231 ~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ..+.+..++..+.+++.+||+.+|++|||+++|
T Consensus       226 ~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i  258 (266)
T cd05064         226 RLPAPRNCPNLLHQLMLDCWQKERGERPRFSQI  258 (266)
T ss_pred             CCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHH
Confidence            112344567779999999999999999999874

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=5.7e-37  Score=260.54  Aligned_cols=213  Identities=21%  Similarity=0.328  Sum_probs=163.8

Q ss_pred             ccccccceecccCceEEEEEEe------cCCceEEEEEeecCC-CchHHHHHHHHHHHhhc-CCCcceeEeeEeecC-Ce
Q 039276           32 FLFSESNLISRGGFGSIYKAKI------QDGMEVVVKGFNLQY-GGAFKNLDVECNMMKII-RHQNLIKIISSCSKD-DF  102 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~------~~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~-~~  102 (263)
                      ++|+..+.||+|+||.||+|..      .++..||+|++.... ......+.+|+.+++.+ +||||+++++++... +.
T Consensus         7 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~   86 (338)
T cd05102           7 DRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGP   86 (338)
T ss_pred             hHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCc
Confidence            4699999999999999999973      235679999987543 23456788999999999 899999999988654 46


Q ss_pred             eEEEEeccCCCCHhhhhhhCC-----------------------------------------------------------
Q 039276          103 KALILECMPHGSLGKCLSTSN-----------------------------------------------------------  123 (263)
Q Consensus       103 ~~lv~e~~~~~~L~~~l~~~~-----------------------------------------------------------  123 (263)
                      .+++|||+++|+|.+++....                                                           
T Consensus        87 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (338)
T cd05102          87 LMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDL  166 (338)
T ss_pred             eEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcccc
Confidence            789999999999999886431                                                           


Q ss_pred             --CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-------------------------ccccccccCc-
Q 039276          124 --YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-------------------------TLATISYMAP-  175 (263)
Q Consensus       124 --~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-------------------------~~g~~~y~aP-  175 (263)
                        ..+++..+..++.|++.||+|||+++++||||||+||+.+..                         ..++..|+|| 
T Consensus       167 ~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE  246 (338)
T cd05102         167 WKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPE  246 (338)
T ss_pred             ccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcH
Confidence              125667788899999999999999999999999999985421                         1234679999 


Q ss_pred             -----------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHHHHHHHH
Q 039276          176 -----------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVF  243 (263)
Q Consensus       176 -----------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  243 (263)
                                 |||||||++|||++ |..||........ +.....            .      ......+..+++++.
T Consensus       247 ~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~-~~~~~~------------~------~~~~~~~~~~~~~l~  307 (338)
T cd05102         247 SIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEE-FCQRLK------------D------GTRMRAPENATPEIY  307 (338)
T ss_pred             HhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHH-HHHHHh------------c------CCCCCCCCCCCHHHH
Confidence                       99999999999997 9999864321111 111000            0      001112345567799


Q ss_pred             HhhccccccCcCCCCCccCC
Q 039276          244 NLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       244 ~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +++.+||+.||++|||+.||
T Consensus       308 ~li~~cl~~dp~~RPs~~el  327 (338)
T cd05102         308 RIMLACWQGDPKERPTFSAL  327 (338)
T ss_pred             HHHHHHccCChhhCcCHHHH
Confidence            99999999999999999874

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=1.2e-36  Score=252.77  Aligned_cols=230  Identities=13%  Similarity=0.134  Sum_probs=167.9

Q ss_pred             cccccceecccCceEEEEEEe-cCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           33 LFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      +|+..+.||+|+||.||+++. .+++.+++|.+....  ....+.+.+|+++++.++|+||+++++.+...+..+++|||
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (287)
T cd07848           2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEY   81 (287)
T ss_pred             CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEec
Confidence            488899999999999999995 468889999997652  23455677899999999999999999999999999999999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc------------------------
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ------------------------  165 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~------------------------  165 (263)
                      ++++.+..+... ...+++..+..++.|++.||+|||..+++|+||||+||+.+..                        
T Consensus        82 ~~~~~l~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~  160 (287)
T cd07848          82 VEKNMLELLEEM-PNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTE  160 (287)
T ss_pred             CCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccccccccc
Confidence            998766655433 3348889999999999999999999999999999999984321                        


Q ss_pred             ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCch--hhhHhhhcCCCchh---------hhhhh
Q 039276          166 TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMT--LKHWVNDLLPNSVM---------KVVSA  222 (263)
Q Consensus       166 ~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~--~~~~~~~~~~~~~~---------~~~~~  222 (263)
                      ..|+..|+||            |||||||++|||++|+.||......+..  ..............         .....
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (287)
T cd07848         161 YVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFP  240 (287)
T ss_pred             cccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccC
Confidence            2467889999            9999999999999999999643211110  00000000000000         00000


Q ss_pred             cccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          223 NLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ...............++.++.+++.+||+.||++|||++|+
T Consensus       241 ~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~  281 (287)
T cd07848         241 AVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQC  281 (287)
T ss_pred             cccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHH
Confidence            00000000001123467789999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=3.3e-37  Score=260.51  Aligned_cols=200  Identities=20%  Similarity=0.232  Sum_probs=161.4

Q ss_pred             ceecccCceEEEEEE-ecCCceEEEEEeecCC---CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccCCC
Q 039276           38 NLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHG  113 (263)
Q Consensus        38 ~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~  113 (263)
                      +.||+|+||.||++. ..+++.||+|++....   ......+.+|+++++.++|+||+++++.+.+.+..+++|||++++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~   80 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence            368999999999998 4568999999997542   234456778999999999999999999999999999999999999


Q ss_pred             CHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------ccccc
Q 039276          114 SLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------TLATI  170 (263)
Q Consensus       114 ~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------~~g~~  170 (263)
                      +|.+++..... +++..+..++.|++.||+|||+++++||||||+||+++..                       ..|++
T Consensus        81 ~L~~~l~~~~~-~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~  159 (323)
T cd05571          81 ELFFHLSRERV-FSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTP  159 (323)
T ss_pred             cHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceecCc
Confidence            99999876543 8899999999999999999999999999999999995321                       24788


Q ss_pred             cccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHHH
Q 039276          171 SYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQC  238 (263)
Q Consensus       171 ~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (263)
                      .|+||            |||||||++|||++|+.||.....  .......           .    ..    ....+..+
T Consensus       160 ~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~--~~~~~~~-----------~----~~----~~~~p~~~  218 (323)
T cd05571         160 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--EKLFELI-----------L----ME----EIRFPRTL  218 (323)
T ss_pred             cccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCH--HHHHHHH-----------H----cC----CCCCCCCC
Confidence            99999            999999999999999999853210  0000000           0    00    01123445


Q ss_pred             HHHHHHhhccccccCcCCCCC
Q 039276          239 MSFVFNLAMECTVESPNQRIN  259 (263)
Q Consensus       239 ~~~l~~l~~~cl~~~p~~Rpt  259 (263)
                      ++++.+++.+||+.||++||+
T Consensus       219 ~~~~~~li~~~L~~dP~~R~~  239 (323)
T cd05571         219 SPEAKSLLAGLLKKDPKQRLG  239 (323)
T ss_pred             CHHHHHHHHHHccCCHHHcCC
Confidence            677999999999999999993

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=1.5e-36  Score=252.19  Aligned_cols=210  Identities=17%  Similarity=0.207  Sum_probs=165.4

Q ss_pred             ccccceecccCceEEEEEE-ecCCceEEEEEeecCC---CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           34 FSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      |+..+.||+|+||.||++. ..+++.||+|.+....   ......+.+|+.+++.++|++++++.+.+.+.+..++++||
T Consensus         2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~   81 (285)
T cd05631           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence            6778899999999999998 4678999999987542   22234567899999999999999999999998999999999


Q ss_pred             cCCCCHhhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc----------------------cc
Q 039276          110 MPHGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI----------------------QT  166 (263)
Q Consensus       110 ~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~----------------------~~  166 (263)
                      +++|+|..++.... ..+++..+..++.|++.||+|||+++++||||||+||+.+.                      ..
T Consensus        82 ~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~  161 (285)
T cd05631          82 MNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVRGR  161 (285)
T ss_pred             cCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCeecCC
Confidence            99999988875432 34888999999999999999999999999999999998532                      12


Q ss_pred             cccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccc
Q 039276          167 LATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT  234 (263)
Q Consensus       167 ~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (263)
                      .|+..|+||            |||||||++|||++|+.||........ ....             ......   .....
T Consensus       162 ~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~-~~~~-------------~~~~~~---~~~~~  224 (285)
T cd05631         162 VGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVK-REEV-------------DRRVKE---DQEEY  224 (285)
T ss_pred             CCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchh-HHHH-------------HHHhhc---ccccC
Confidence            468889999            999999999999999999874321110 0000             000000   00112


Q ss_pred             hHHHHHHHHHhhccccccCcCCCCCc
Q 039276          235 KEQCMSFVFNLAMECTVESPNQRINA  260 (263)
Q Consensus       235 ~~~~~~~l~~l~~~cl~~~p~~Rpt~  260 (263)
                      +..+++++.+++.+||+.||++||++
T Consensus       225 ~~~~s~~~~~li~~~l~~~P~~R~~~  250 (285)
T cd05631         225 SEKFSEDAKSICRMLLTKNPKERLGC  250 (285)
T ss_pred             CccCCHHHHHHHHHHhhcCHHHhcCC
Confidence            33456779999999999999999984

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=100.00  E-value=1.4e-36  Score=261.58  Aligned_cols=213  Identities=21%  Similarity=0.307  Sum_probs=165.4

Q ss_pred             ccccccceecccCceEEEEEEe------cCCceEEEEEeecCC-CchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCee
Q 039276           32 FLFSESNLISRGGFGSIYKAKI------QDGMEVVVKGFNLQY-GGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFK  103 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~------~~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~  103 (263)
                      .+|+..+.||+|+||.||+|.+      .++..||+|+++... ....+.+.+|+++++.+ +||||+++++++.+.+..
T Consensus        35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~  114 (375)
T cd05104          35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPT  114 (375)
T ss_pred             HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcc
Confidence            3589999999999999999963      235689999997543 33456788999999999 899999999999999999


Q ss_pred             EEEEeccCCCCHhhhhhhCC------------------------------------------------------------
Q 039276          104 ALILECMPHGSLGKCLSTSN------------------------------------------------------------  123 (263)
Q Consensus       104 ~lv~e~~~~~~L~~~l~~~~------------------------------------------------------------  123 (263)
                      +++|||+++|+|.+++....                                                            
T Consensus       115 ~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (375)
T cd05104         115 LVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSY  194 (375)
T ss_pred             eeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccccee
Confidence            99999999999999886422                                                            


Q ss_pred             --------------CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc-----------------------
Q 039276          124 --------------YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT-----------------------  166 (263)
Q Consensus       124 --------------~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~-----------------------  166 (263)
                                    ..+++..+..++.|++.||+|||+++++||||||+||+.+...                       
T Consensus       195 ~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~  274 (375)
T cd05104         195 IDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKG  274 (375)
T ss_pred             cccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCcccccccC
Confidence                          1256778889999999999999999999999999999854211                       


Q ss_pred             --cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccc
Q 039276          167 --LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEH  231 (263)
Q Consensus       167 --~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (263)
                        .++..|+||            |||||||+++||++ |..||........ +.....            ...      +
T Consensus       275 ~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~-~~~~~~------------~~~------~  335 (375)
T cd05104         275 NARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSK-FYKMIK------------EGY------R  335 (375)
T ss_pred             CCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHH-HHHHHH------------hCc------c
Confidence              123469999            99999999999998 8899864322211 111111            100      1


Q ss_pred             ccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          232 FMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       232 ~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ...+...+.++.+++.+||+.||++|||+.||
T Consensus       336 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei  367 (375)
T cd05104         336 MLSPECAPSEMYDIMKSCWDADPLKRPTFKQI  367 (375)
T ss_pred             CCCCCCCCHHHHHHHHHHccCChhHCcCHHHH
Confidence            11123345679999999999999999999875

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=100.00  E-value=5.3e-36  Score=253.93  Aligned_cols=164  Identities=20%  Similarity=0.236  Sum_probs=143.9

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      ++|+..+.||+|+||.||++.. .++..+++|.+.... ......+.+|+++++.++|+||+++++++.+.+..+++|||
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   84 (331)
T cd06649           5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH   84 (331)
T ss_pred             ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeec
Confidence            4599999999999999999994 468889999987653 23456788999999999999999999999999999999999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccC-CccccccCCCccccccc---------------------cc
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFG-HSTHLLLKEDQSLTQIQ---------------------TL  167 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~h~dlk~~nil~~~~---------------------~~  167 (263)
                      +++++|.+++..... +++..+..++.|++.||.|||++ +++|+||||+||+....                     ..
T Consensus        85 ~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  163 (331)
T cd06649          85 MDGGSLDQVLKEAKR-IPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV  163 (331)
T ss_pred             CCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccccccccccccCC
Confidence            999999999976554 88899999999999999999986 69999999999995432                     24


Q ss_pred             ccccccCc------------chhhHHHHHHHHHhCCCCCcc
Q 039276          168 ATISYMAP------------DTYNFGIMIMETFSGKKPTIK  196 (263)
Q Consensus       168 g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~  196 (263)
                      |+..|+||            |||||||++|||++|+.||..
T Consensus       164 g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~  204 (331)
T cd06649         164 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPP  204 (331)
T ss_pred             CCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence            68889999            999999999999999999964

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=9.9e-37  Score=261.60  Aligned_cols=208  Identities=19%  Similarity=0.266  Sum_probs=165.6

Q ss_pred             cccccceecccCceEEEEEEe-cCCceEEEEEeecCC---CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEe
Q 039276           33 LFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      +|+..+.||+|+||.||++.. .+++.||+|++....   ......+.+|+.+++.++|+||+++++.+.+....+++||
T Consensus         2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E   81 (364)
T cd05599           2 DFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIME   81 (364)
T ss_pred             CceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEEC
Confidence            488899999999999999994 568999999997542   2344567789999999999999999999999999999999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------  165 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------  165 (263)
                      |+++|+|.+++..... +++..+..++.|++.||+|||+++++||||||+||+.+..                       
T Consensus        82 ~~~~g~L~~~l~~~~~-l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~  160 (364)
T cd05599          82 YLPGGDMMTLLMKKDT-FTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFY  160 (364)
T ss_pred             CCCCcHHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceecccccccccc
Confidence            9999999999976554 8999999999999999999999999999999999985321                       


Q ss_pred             --------------------------------------ccccccccCc------------chhhHHHHHHHHHhCCCCCc
Q 039276          166 --------------------------------------TLATISYMAP------------DTYNFGIMIMETFSGKKPTI  195 (263)
Q Consensus       166 --------------------------------------~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~  195 (263)
                                                            ..||+.|+||            |||||||++|||++|..||.
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~  240 (364)
T cd05599         161 RILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFC  240 (364)
T ss_pred             ccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCC
Confidence                                                  2378899999            99999999999999999986


Q ss_pred             cccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCC
Q 039276          196 KFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRIN  259 (263)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt  259 (263)
                      ..... ........            .    ......+....+++++.+++.+|+. +|.+|++
T Consensus       241 ~~~~~-~~~~~i~~------------~----~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~  286 (364)
T cd05599         241 SDNPQ-ETYRKIIN------------W----KETLQFPDEVPLSPEAKDLIKRLCC-EAERRLG  286 (364)
T ss_pred             CCCHH-HHHHHHHc------------C----CCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCC
Confidence            42110 00000000            0    0000011122456678999999997 9999998

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.3e-36  Score=249.51  Aligned_cols=209  Identities=22%  Similarity=0.300  Sum_probs=172.0

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCCC---chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYG---GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~---~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      ..|+..+.||.|.-|+||++.. .++..+|+|++.+..-   +-..+...|-++|++++||.++.++..++.+.+.|++|
T Consensus        77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m  156 (459)
T KOG0610|consen   77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM  156 (459)
T ss_pred             HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence            5689999999999999999994 4468999999977633   23445566889999999999999999999999999999


Q ss_pred             eccCCCCHhhhhhhC-CCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccc-----------------------
Q 039276          108 ECMPHGSLGKCLSTS-NYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQ-----------------------  163 (263)
Q Consensus       108 e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~-----------------------  163 (263)
                      |||+||+|..+.+.. ++.+++..+..++.+++.||+|||-.|||+|||||||||+.                       
T Consensus       157 eyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~  236 (459)
T KOG0610|consen  157 EYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLV  236 (459)
T ss_pred             ecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCCCCCeee
Confidence            999999999988764 44599999999999999999999999999999999999910                       


Q ss_pred             --------------------------------------------------------ccccccccccCc------------
Q 039276          164 --------------------------------------------------------IQTLATISYMAP------------  175 (263)
Q Consensus       164 --------------------------------------------------------~~~~g~~~y~aP------------  175 (263)
                                                                              ...+||-+|+||            
T Consensus       237 ~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAV  316 (459)
T KOG0610|consen  237 KSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAV  316 (459)
T ss_pred             ccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCchh
Confidence                                                                    012578889999            


Q ss_pred             chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcC
Q 039276          176 DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPN  255 (263)
Q Consensus       176 Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~  255 (263)
                      |.|+||+++|||+.|+.||....+. ..            +..++.+.+      .++....++.++++||+++|..||+
T Consensus       317 DWWtfGIflYEmLyG~TPFKG~~~~-~T------------l~NIv~~~l------~Fp~~~~vs~~akDLIr~LLvKdP~  377 (459)
T KOG0610|consen  317 DWWTFGIFLYEMLYGTTPFKGSNNK-ET------------LRNIVGQPL------KFPEEPEVSSAAKDLIRKLLVKDPS  377 (459)
T ss_pred             hHHHHHHHHHHHHhCCCCcCCCCch-hh------------HHHHhcCCC------cCCCCCcchhHHHHHHHHHhccChh
Confidence            9999999999999999999754222 22            223332222      2233447778899999999999999


Q ss_pred             CCCC
Q 039276          256 QRIN  259 (263)
Q Consensus       256 ~Rpt  259 (263)
                      +|..
T Consensus       378 kRlg  381 (459)
T KOG0610|consen  378 KRLG  381 (459)
T ss_pred             hhhc
Confidence            9987

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=2.1e-36  Score=256.93  Aligned_cols=227  Identities=18%  Similarity=0.231  Sum_probs=165.1

Q ss_pred             cccccceecccCceEEEEEE-ecCCceEEEEEeecC--CCchHHHHHHHHHHHhhcCCCcceeEeeEeecC-----CeeE
Q 039276           33 LFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQ--YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKD-----DFKA  104 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-----~~~~  104 (263)
                      +|+..+.||+|+||.||+|. ..++..||+|.+...  .......+.+|+++++.++||||+++++++...     ...|
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   80 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY   80 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence            47889999999999999999 456899999998753  223455678899999999999999999987533     2479


Q ss_pred             EEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-------------------
Q 039276          105 LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-------------------  165 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-------------------  165 (263)
                      ++|||+. ++|.+++..... +++..+..++.|++.||+|||+++++||||||+||+.+..                   
T Consensus        81 lv~e~~~-~~L~~~l~~~~~-~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~  158 (338)
T cd07859          81 VVFELME-SDLHQVIKANDD-LTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP  158 (338)
T ss_pred             EEEecCC-CCHHHHHHhccc-CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccccC
Confidence            9999995 599998876554 8899999999999999999999999999999999995321                   


Q ss_pred             -------ccccccccCc--------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhc-----------CC
Q 039276          166 -------TLATISYMAP--------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDL-----------LP  213 (263)
Q Consensus       166 -------~~g~~~y~aP--------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~-----------~~  213 (263)
                             ..|+..|+||              |||||||++|||++|+.||...... ..+.......           ..
T Consensus       159 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~  237 (338)
T cd07859         159 TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVV-HQLDLITDLLGTPSPETISRVRN  237 (338)
T ss_pred             ccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChH-HHHHHHHHHhCCCCHHHHHHhhh
Confidence                   2467789999              9999999999999999998642110 0000000000           00


Q ss_pred             Cchhhhhhhccccccccc-ccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          214 NSVMKVVSANLLSREDEH-FMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ......... +....+.. ......+++++.+++.+||+.||++|||++|+
T Consensus       238 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~  287 (338)
T cd07859         238 EKARRYLSS-MRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEA  287 (338)
T ss_pred             hhHHHHHHh-hcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHH
Confidence            000000000 00000000 00112346678999999999999999999874

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=100.00  E-value=2.4e-36  Score=260.77  Aligned_cols=213  Identities=17%  Similarity=0.271  Sum_probs=166.4

Q ss_pred             cccccceecccCceEEEEEE-ecCCceEEEEEeecCC---CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEe
Q 039276           33 LFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      .|+..+.||+|+||.||+|. ..+++.||+|++....   ......+.+|+.+++.++|+||+++++.+.+....+++||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E   81 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence            48889999999999999998 4568899999997642   2345567889999999999999999999999999999999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc------------------------
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI------------------------  164 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~------------------------  164 (263)
                      |+++|+|.+++..... +++..+..++.|++.||+|||..+++||||||+||+++.                        
T Consensus        82 ~~~gg~L~~~l~~~~~-~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~  160 (381)
T cd05626          82 YIPGGDMMSLLIRMEV-FPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYY  160 (381)
T ss_pred             cCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCcccccccccccc
Confidence            9999999999976554 788888999999999999999999999999999999431                        


Q ss_pred             ----------------------------------------------cccccccccCc------------chhhHHHHHHH
Q 039276          165 ----------------------------------------------QTLATISYMAP------------DTYNFGIMIME  186 (263)
Q Consensus       165 ----------------------------------------------~~~g~~~y~aP------------Dv~SlG~il~e  186 (263)
                                                                    ...||+.|+||            |||||||++||
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~e  240 (381)
T cd05626         161 QKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFE  240 (381)
T ss_pred             cccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHH
Confidence                                                          12478899999            99999999999


Q ss_pred             HHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhcc--ccccCcCCCCCccCC
Q 039276          187 TFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAME--CTVESPNQRINAKEM  263 (263)
Q Consensus       187 ll~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~--cl~~~p~~Rpt~~ev  263 (263)
                      |++|+.||......+. ...            +...    ......+....+++++.+++.+  |+..++..||++++|
T Consensus       241 lltG~~Pf~~~~~~~~-~~~------------i~~~----~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~  302 (381)
T cd05626         241 MLVGQPPFLAPTPTET-QLK------------VINW----ENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDI  302 (381)
T ss_pred             HHhCCCCCcCCCHHHH-HHH------------HHcc----ccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHH
Confidence            9999999864321111 000            0000    0000111122456678888877  556666679998764

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=100.00  E-value=5.1e-36  Score=246.36  Aligned_cols=215  Identities=21%  Similarity=0.266  Sum_probs=170.7

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      .+|+..+.||+|+||.||+|.. .+++.+++|++..........+.+|+.++++++|+|++++++.+...+..++++||+
T Consensus         9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~   88 (267)
T cd06646           9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYC   88 (267)
T ss_pred             hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCC
Confidence            4699999999999999999994 568899999998765556667788999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------cc
Q 039276          111 PHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------TL  167 (263)
Q Consensus       111 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------~~  167 (263)
                      ++++|.+++..... +++..+..++.|++.||+|||+++++|+|++|+||+.+..                       ..
T Consensus        89 ~~~~L~~~~~~~~~-~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~  167 (267)
T cd06646          89 GGGSLQDIYHVTGP-LSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRKSFI  167 (267)
T ss_pred             CCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeecccccccCccc
Confidence            99999998876543 7889999999999999999999999999999999985321                       13


Q ss_pred             ccccccCc---------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccc
Q 039276          168 ATISYMAP---------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHF  232 (263)
Q Consensus       168 g~~~y~aP---------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (263)
                      |+..|+||               |||||||+++||++|+.||..........             .........   ...
T Consensus       168 ~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~-------------~~~~~~~~~---~~~  231 (267)
T cd06646         168 GTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF-------------LMSKSNFQP---PKL  231 (267)
T ss_pred             cCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhe-------------eeecCCCCC---CCC
Confidence            56678888               99999999999999999985321111000             000000000   000


Q ss_pred             cchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          233 MTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       233 ~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .....++..+.+++.+||+.+|++|||+++|
T Consensus       232 ~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~i  262 (267)
T cd06646         232 KDKTKWSSTFHNFVKISLTKNPKKRPTAERL  262 (267)
T ss_pred             ccccccCHHHHHHHHHHhhCChhhCcCHHHH
Confidence            1123456679999999999999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.9e-36  Score=256.88  Aligned_cols=217  Identities=19%  Similarity=0.246  Sum_probs=170.1

Q ss_pred             cccccceecccCceEEEEEEec-CCceEEEEEeecCC---CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEe
Q 039276           33 LFSESNLISRGGFGSIYKAKIQ-DGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~~-~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      .|+..+.||+|+||.||+|... +++.||+|++....   ......+.+|++++..++|+||+++++.+.+.+..|++||
T Consensus         2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e   81 (333)
T cd05600           2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAME   81 (333)
T ss_pred             CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEe
Confidence            4888999999999999999954 58899999997652   2345567889999999999999999999999999999999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc--------------------cccc
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI--------------------QTLA  168 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~--------------------~~~g  168 (263)
                      |+++++|.+++..... +++..+..++.|++.||+|||+++++||||||+||+.+.                    ...|
T Consensus        82 ~~~g~~L~~~l~~~~~-l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~~~~g  160 (333)
T cd05600          82 YVPGGDFRTLLNNLGV-LSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANSVVG  160 (333)
T ss_pred             CCCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCcccccccCCccc
Confidence            9999999999976543 788899999999999999999999999999999998533                    2357


Q ss_pred             cccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchH
Q 039276          169 TISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKE  236 (263)
Q Consensus       169 ~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (263)
                      ++.|+||            |||||||++|||++|+.||...... ..+..... ...     ..     .. +.......
T Consensus       161 t~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~-~~~~~i~~-~~~-----~~-----~~-~~~~~~~~  227 (333)
T cd05600         161 SPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPN-ETWENLKY-WKE-----TL-----QR-PVYDDPRF  227 (333)
T ss_pred             CccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHH-HHHHHHHh-ccc-----cc-----cC-CCCCcccc
Confidence            8899999            9999999999999999998642111 11111100 000     00     00 00000012


Q ss_pred             HHHHHHHHhhccccccCcCCCCCccCC
Q 039276          237 QCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       237 ~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .+++++.+++.+||..+|++||++++|
T Consensus       228 ~~s~~~~~li~~~l~~~~~rr~s~~~l  254 (333)
T cd05600         228 NLSDEAWDLITKLINDPSRRFGSLEDI  254 (333)
T ss_pred             ccCHHHHHHHHHHhhChhhhcCCHHHH
Confidence            456779999999999999999998764

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.9e-36  Score=254.66  Aligned_cols=199  Identities=17%  Similarity=0.210  Sum_probs=161.3

Q ss_pred             ecccCceEEEEEEe-cCCceEEEEEeecC---CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccCCCCH
Q 039276           40 ISRGGFGSIYKAKI-QDGMEVVVKGFNLQ---YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSL  115 (263)
Q Consensus        40 lg~g~~g~v~~~~~-~~~~~v~vK~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L  115 (263)
                      ||+|+||.||++.. .+++.||+|.+...   .......+..|+.+++.++||||+++++.+.+.+..+++|||+++++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            69999999999994 45889999999754   233456677899999999999999999999999999999999999999


Q ss_pred             hhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------ccccccc
Q 039276          116 GKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------TLATISY  172 (263)
Q Consensus       116 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------~~g~~~y  172 (263)
                      .+++..... +++..+..++.|++.||+|||+++++||||||+||+.+..                       ..|++.|
T Consensus        81 ~~~l~~~~~-~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y  159 (312)
T cd05585          81 FHHLQREGR-FDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTPEY  159 (312)
T ss_pred             HHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCccc
Confidence            999976544 8899999999999999999999999999999999985321                       2478899


Q ss_pred             cCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHHHHH
Q 039276          173 MAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMS  240 (263)
Q Consensus       173 ~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (263)
                      +||            |||||||++|||++|+.||....     .......        +...        ....+..+++
T Consensus       160 ~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~-----~~~~~~~--------~~~~--------~~~~~~~~~~  218 (312)
T cd05585         160 LAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDEN-----VNEMYRK--------ILQE--------PLRFPDGFDR  218 (312)
T ss_pred             CCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCC-----HHHHHHH--------HHcC--------CCCCCCcCCH
Confidence            999            99999999999999999986321     1111110        0000        0112345667


Q ss_pred             HHHHhhccccccCcCCCCCc
Q 039276          241 FVFNLAMECTVESPNQRINA  260 (263)
Q Consensus       241 ~l~~l~~~cl~~~p~~Rpt~  260 (263)
                      ++.+++.+||+.||++||++
T Consensus       219 ~~~~li~~~L~~dp~~R~~~  238 (312)
T cd05585         219 DAKDLLIGLLSRDPTRRLGY  238 (312)
T ss_pred             HHHHHHHHHcCCCHHHcCCC
Confidence            79999999999999999875

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-36  Score=256.35  Aligned_cols=213  Identities=19%  Similarity=0.254  Sum_probs=185.4

Q ss_pred             ccccccccceecccCceEEEEEE-ecCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEE
Q 039276           30 GLFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALI  106 (263)
Q Consensus        30 ~~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv  106 (263)
                      .+..|+..+.||+|.|+.|-+++ .=+|.+||||++.+-.  .-....+.+|+++++.++|||||++|++..+.-.+|+|
T Consensus        16 IAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLi   95 (864)
T KOG4717|consen   16 IAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLI   95 (864)
T ss_pred             eeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEE
Confidence            44569999999999999999988 4459999999997653  23355688999999999999999999999999999999


Q ss_pred             EeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccc-----------------------c
Q 039276          107 LECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLT-----------------------Q  163 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~-----------------------~  163 (263)
                      +|.=.+|+|.+|+-....++.+....+++.||+.|+.|+|...+|||||||+|++.                       -
T Consensus        96 LELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL  175 (864)
T KOG4717|consen   96 LELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKL  175 (864)
T ss_pred             EEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCCCcchh
Confidence            99999999999999887779999999999999999999999999999999999971                       1


Q ss_pred             ccccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccc
Q 039276          164 IQTLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDE  230 (263)
Q Consensus       164 ~~~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (263)
                      .+..|+..|-||             ||||||||||.|++|+.||..             ..+.+.++.+++...      
T Consensus       176 ~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqe-------------ANDSETLTmImDCKY------  236 (864)
T KOG4717|consen  176 TTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQE-------------ANDSETLTMIMDCKY------  236 (864)
T ss_pred             hcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCcccc-------------ccchhhhhhhhcccc------
Confidence            234688888888             999999999999999999874             445566677777664      


Q ss_pred             cccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          231 HFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       231 ~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                        ..+.-++.+.++||.+||..||++|.|.+||
T Consensus       237 --tvPshvS~eCrdLI~sMLvRdPkkRAslEeI  267 (864)
T KOG4717|consen  237 --TVPSHVSKECRDLIQSMLVRDPKKRASLEEI  267 (864)
T ss_pred             --cCchhhhHHHHHHHHHHHhcCchhhccHHHH
Confidence              3477889999999999999999999998875

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=100.00  E-value=1.8e-36  Score=255.98  Aligned_cols=200  Identities=19%  Similarity=0.221  Sum_probs=161.0

Q ss_pred             ceecccCceEEEEEE-ecCCceEEEEEeecCC---CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccCCC
Q 039276           38 NLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHG  113 (263)
Q Consensus        38 ~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~  113 (263)
                      +.||+|+||.||++. ..++..||+|++....   ......+.+|+.+++.++|||++++++.+...+..++||||++++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence            368999999999998 4568999999997642   234456678999999999999999999999999999999999999


Q ss_pred             CHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------ccccc
Q 039276          114 SLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------TLATI  170 (263)
Q Consensus       114 ~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------~~g~~  170 (263)
                      +|..++..... +++..++.++.|++.||+|||+++++||||||+||+.+..                       ..|++
T Consensus        81 ~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~  159 (323)
T cd05595          81 ELFFHLSRERV-FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTP  159 (323)
T ss_pred             cHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccCCc
Confidence            99988876543 8899999999999999999999999999999999985321                       24788


Q ss_pred             cccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHHH
Q 039276          171 SYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQC  238 (263)
Q Consensus       171 ~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (263)
                      .|+||            |||||||++|||++|+.||...... .......            ..        ....+..+
T Consensus       160 ~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~-~~~~~~~------------~~--------~~~~p~~~  218 (323)
T cd05595         160 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-RLFELIL------------ME--------EIRFPRTL  218 (323)
T ss_pred             CcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHH-HHHHHHh------------cC--------CCCCCCCC
Confidence            99999            9999999999999999998642111 0011000            00        00123345


Q ss_pred             HHHHHHhhccccccCcCCCCC
Q 039276          239 MSFVFNLAMECTVESPNQRIN  259 (263)
Q Consensus       239 ~~~l~~l~~~cl~~~p~~Rpt  259 (263)
                      ++++.+++.+||+.||++||+
T Consensus       219 ~~~~~~li~~~L~~dP~~R~~  239 (323)
T cd05595         219 SPEAKSLLAGLLKKDPKQRLG  239 (323)
T ss_pred             CHHHHHHHHHHccCCHHHhCC
Confidence            677999999999999999983

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=100.00  E-value=5.2e-36  Score=244.91  Aligned_cols=211  Identities=20%  Similarity=0.278  Sum_probs=167.2

Q ss_pred             ccccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccC
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMP  111 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~  111 (263)
                      .+|+..+.||+|+||.||++.+.++..+++|.+.... .....+.+|+++++.++|+|++++++++.+.+..+++|||++
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~   82 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME   82 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence            3478889999999999999998777889999886443 234567889999999999999999999999899999999999


Q ss_pred             CCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc------------------------c
Q 039276          112 HGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT------------------------L  167 (263)
Q Consensus       112 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~------------------------~  167 (263)
                      +++|.+++......+++..+..++.|++.||+|||+.+++|+||+|+||+.....                        .
T Consensus        83 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~~~  162 (256)
T cd05114          83 NGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAK  162 (256)
T ss_pred             CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCceeccCCCC
Confidence            9999999876544578899999999999999999999999999999999954321                        1


Q ss_pred             ccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccc
Q 039276          168 ATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT  234 (263)
Q Consensus       168 g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (263)
                      ++..|+||            ||||||+++|||++ |+.||...... ..+......                   .+...
T Consensus       163 ~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~-~~~~~i~~~-------------------~~~~~  222 (256)
T cd05114         163 FPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNY-EVVEMISRG-------------------FRLYR  222 (256)
T ss_pred             CchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHHCC-------------------CCCCC
Confidence            23468888            99999999999999 89998642110 111111000                   00111


Q ss_pred             hHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          235 KEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       235 ~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +...+.++.+++.+||+.+|++|||+++|
T Consensus       223 ~~~~~~~~~~li~~c~~~~p~~Rps~~~l  251 (256)
T cd05114         223 PKLASMTVYEVMYSCWHEKPEGRPTFAEL  251 (256)
T ss_pred             CCCCCHHHHHHHHHHccCCcccCcCHHHH
Confidence            22334568999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=2.6e-36  Score=255.46  Aligned_cols=199  Identities=21%  Similarity=0.270  Sum_probs=160.9

Q ss_pred             ceecccCceEEEEEE-ecCCceEEEEEeecCC---CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccCCC
Q 039276           38 NLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHG  113 (263)
Q Consensus        38 ~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~  113 (263)
                      +.||+|+||.||++. ..+++.||+|++....   ......+.+|+.+++.++||||+++.+.+.+.+..++||||++++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g   80 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG   80 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence            368999999999998 4568999999997542   234556778999999999999999999999999999999999999


Q ss_pred             CHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------ccccc
Q 039276          114 SLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------TLATI  170 (263)
Q Consensus       114 ~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------~~g~~  170 (263)
                      +|..++..... +++..+..++.|++.||+|||.++++||||||+||+++..                       ..|++
T Consensus        81 ~L~~~l~~~~~-l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~  159 (328)
T cd05593          81 ELFFHLSRERV-FSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGTP  159 (328)
T ss_pred             CHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccCCc
Confidence            99998876543 8899999999999999999999999999999999985321                       24788


Q ss_pred             cccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHHH
Q 039276          171 SYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQC  238 (263)
Q Consensus       171 ~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (263)
                      .|+||            |||||||++|+|++|+.||.....     ......            ...    .....+..+
T Consensus       160 ~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~-----~~~~~~------------~~~----~~~~~p~~~  218 (328)
T cd05593         160 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----EKLFEL------------ILM----EDIKFPRTL  218 (328)
T ss_pred             CccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCH-----HHHHHH------------hcc----CCccCCCCC
Confidence            99999            999999999999999999853211     011100            000    001123455


Q ss_pred             HHHHHHhhccccccCcCCCC
Q 039276          239 MSFVFNLAMECTVESPNQRI  258 (263)
Q Consensus       239 ~~~l~~l~~~cl~~~p~~Rp  258 (263)
                      ++++.+++.+||+.||++||
T Consensus       219 ~~~~~~li~~~L~~dP~~R~  238 (328)
T cd05593         219 SADAKSLLSGLLIKDPNKRL  238 (328)
T ss_pred             CHHHHHHHHHHcCCCHHHcC
Confidence            67799999999999999998

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=1.8e-36  Score=257.53  Aligned_cols=205  Identities=18%  Similarity=0.166  Sum_probs=165.4

Q ss_pred             ccccccceecccCceEEEEEEec-C-CceEEEEEeecC---CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ-D-GMEVVVKGFNLQ---YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALI  106 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~-~-~~~v~vK~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv  106 (263)
                      .+|+..+.||+|+||.||+|... . +..||+|.+...   .....+.+.+|+++++.++||||+++++++.+.+..+++
T Consensus        30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv  109 (340)
T PTZ00426         30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV  109 (340)
T ss_pred             hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence            46999999999999999999843 3 368999998654   233456678899999999999999999999999999999


Q ss_pred             EeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc--------------------c
Q 039276          107 LECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ--------------------T  166 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~--------------------~  166 (263)
                      |||+++|+|.+++..... +++..+..++.|++.||+|||+++++||||||+||+.+..                    .
T Consensus       110 ~Ey~~~g~L~~~i~~~~~-~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~~~~~  188 (340)
T PTZ00426        110 LEFVIGGEFFTFLRRNKR-FPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRTYTL  188 (340)
T ss_pred             EeCCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCCCccee
Confidence            999999999999987654 8889999999999999999999999999999999995432                    2


Q ss_pred             cccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccc
Q 039276          167 LATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT  234 (263)
Q Consensus       167 ~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (263)
                      .||+.|+||            |||||||++|||++|+.||...... ......            ....        ...
T Consensus       189 ~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~-~~~~~i------------~~~~--------~~~  247 (340)
T PTZ00426        189 CGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL-LIYQKI------------LEGI--------IYF  247 (340)
T ss_pred             cCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH-HHHHHH------------hcCC--------CCC
Confidence            478889999            9999999999999999998632110 001111            0000        011


Q ss_pred             hHHHHHHHHHhhccccccCcCCCC
Q 039276          235 KEQCMSFVFNLAMECTVESPNQRI  258 (263)
Q Consensus       235 ~~~~~~~l~~l~~~cl~~~p~~Rp  258 (263)
                      +..+++++.+++.+||+.+|++|+
T Consensus       248 p~~~~~~~~~li~~~l~~dp~~R~  271 (340)
T PTZ00426        248 PKFLDNNCKHLMKKLLSHDLTKRY  271 (340)
T ss_pred             CCCCCHHHHHHHHHHcccCHHHcC
Confidence            234556689999999999999996

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.8e-36  Score=260.00  Aligned_cols=211  Identities=20%  Similarity=0.240  Sum_probs=164.8

Q ss_pred             cccccceecccCceEEEEEE-ecCCceEEEEEeecCC---CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEe
Q 039276           33 LFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      +|...+.||+|+||.||++. ..+++.||+|++....   ....+.+.+|+++++.++|+||+++++++.+....|+|||
T Consensus         2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E   81 (377)
T cd05629           2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIME   81 (377)
T ss_pred             CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEe
Confidence            48889999999999999998 4568999999986542   2334567789999999999999999999999999999999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------  165 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------  165 (263)
                      |+++++|.+++..... +++..+..++.|++.||+|||+++++||||||+||+++..                       
T Consensus        82 ~~~gg~L~~~l~~~~~-~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~  160 (377)
T cd05629          82 FLPGGDLMTMLIKYDT-FSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYY  160 (377)
T ss_pred             CCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeecccccccccccccccc
Confidence            9999999999976543 7888899999999999999999999999999999994311                       


Q ss_pred             -----------------------------------------------ccccccccCc------------chhhHHHHHHH
Q 039276          166 -----------------------------------------------TLATISYMAP------------DTYNFGIMIME  186 (263)
Q Consensus       166 -----------------------------------------------~~g~~~y~aP------------Dv~SlG~il~e  186 (263)
                                                                     ..||+.|+||            |||||||++||
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~e  240 (377)
T cd05629         161 QKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFE  240 (377)
T ss_pred             cccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhhhh
Confidence                                                           2478899999            99999999999


Q ss_pred             HHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCC---CccC
Q 039276          187 TFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRI---NAKE  262 (263)
Q Consensus       187 ll~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rp---t~~e  262 (263)
                      |++|..||..... ...+..... .               ......+....++.++.+++.+|+. +|.+|+   |+.|
T Consensus       241 lltG~~Pf~~~~~-~~~~~~i~~-~---------------~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~  301 (377)
T cd05629         241 CLIGWPPFCSENS-HETYRKIIN-W---------------RETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHE  301 (377)
T ss_pred             hhcCCCCCCCCCH-HHHHHHHHc-c---------------CCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHH
Confidence            9999999863211 111111110 0               0000011122356678999999997 777764   6654

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=100.00  E-value=1.9e-36  Score=260.92  Aligned_cols=211  Identities=17%  Similarity=0.242  Sum_probs=165.4

Q ss_pred             cccccceecccCceEEEEEE-ecCCceEEEEEeecCC---CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEe
Q 039276           33 LFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      .|+..+.||+|+||.||+++ ..+++.||+|++....   ......+.+|+++++.++|+||+++++.+.+.+..+++||
T Consensus         2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E   81 (376)
T cd05598           2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (376)
T ss_pred             CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence            48899999999999999999 4568999999986532   2334567789999999999999999999999999999999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------  165 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------  165 (263)
                      |+++|+|.+++...+. +++..+..++.|++.||+|||+++++||||||+||+.+..                       
T Consensus        82 ~~~~g~L~~~i~~~~~-~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~  160 (376)
T cd05598          82 YIPGGDMMSLLIRLGI-FEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYY  160 (376)
T ss_pred             CCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccccccc
Confidence            9999999999976543 7888889999999999999999999999999999985321                       


Q ss_pred             -------------------------------------------ccccccccCc------------chhhHHHHHHHHHhC
Q 039276          166 -------------------------------------------TLATISYMAP------------DTYNFGIMIMETFSG  190 (263)
Q Consensus       166 -------------------------------------------~~g~~~y~aP------------Dv~SlG~il~ell~g  190 (263)
                                                                 ..||+.|+||            |||||||++|||++|
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G  240 (376)
T cd05598         161 QKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG  240 (376)
T ss_pred             ccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhC
Confidence                                                       2478899999            999999999999999


Q ss_pred             CCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCC---CccC
Q 039276          191 KKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRI---NAKE  262 (263)
Q Consensus       191 ~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rp---t~~e  262 (263)
                      +.||......+. .... ...               ......+....+++++.+++.+|+ .+|.+|+   |+.|
T Consensus       241 ~~Pf~~~~~~~~-~~~i-~~~---------------~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~e  297 (376)
T cd05598         241 QPPFLADTPAET-QLKV-INW---------------ETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADE  297 (376)
T ss_pred             CCCCCCCCHHHH-HHHH-hcc---------------CccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHH
Confidence            999864311110 0000 000               000011112345666888888876 5999999   6655

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1e-36  Score=257.92  Aligned_cols=214  Identities=18%  Similarity=0.245  Sum_probs=171.6

Q ss_pred             ccccccceecccCceEEEEEEecCCceEEEEEeecC--CCchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCeeEEEEe
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQ--YGGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~--~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      ..|+..+.||+||.++||++...+.+-+++|++...  +.....-+.+||..|.++ .|.+|++++++-...+++|+|||
T Consensus       361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE  440 (677)
T KOG0596|consen  361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME  440 (677)
T ss_pred             chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee
Confidence            349999999999999999999888888898888655  455677899999999999 59999999999999999999999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccc------------------------cc
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLT------------------------QI  164 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~------------------------~~  164 (263)
                      += +.+|.+++++.....+...++.+..||+.++.++|.+||||.||||.|+++                        ..
T Consensus       441 ~G-d~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlVkG~LKLIDFGIA~aI~~DTTsI~kd  519 (677)
T KOG0596|consen  441 CG-DIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLVKGRLKLIDFGIANAIQPDTTSIVKD  519 (677)
T ss_pred             cc-cccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEEeeeEEeeeechhcccCccccceeec
Confidence            65 559999999877666656788899999999999999999999999999982                        23


Q ss_pred             cccccccccCc-----------------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhh
Q 039276          165 QTLATISYMAP-----------------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVS  221 (263)
Q Consensus       165 ~~~g~~~y~aP-----------------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (263)
                      ..+||+.||+|                       ||||||||||+|+.|+.||.++.+.-.-+..+......-+...+  
T Consensus       520 sQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp~~--  597 (677)
T KOG0596|consen  520 SQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEFPDI--  597 (677)
T ss_pred             cccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccccccCC--
Confidence            45899999999                       99999999999999999997653332222211111111111000  


Q ss_pred             hcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          222 ANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                                   +.  ..++.++|+.||.+||.+|||+.||
T Consensus       598 -------------~~--~~~li~~mK~CL~rdPkkR~si~eL  624 (677)
T KOG0596|consen  598 -------------PE--NDELIDVMKCCLARDPKKRWSIPEL  624 (677)
T ss_pred             -------------CC--chHHHHHHHHHHhcCcccCCCcHHH
Confidence                         00  1128999999999999999998775

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.4e-36  Score=257.79  Aligned_cols=212  Identities=19%  Similarity=0.284  Sum_probs=169.1

Q ss_pred             cccccceecccCceEEEEEEe-cCCceEEEEEeecCC---CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEe
Q 039276           33 LFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      +|+..+.||+|+||.||+|.. .+++.||+|++....   ......+..|+.++..++|+|++++++.+.+.+..++|||
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (350)
T cd05573           2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVME   81 (350)
T ss_pred             CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEc
Confidence            588999999999999999994 468999999997642   2445667889999999999999999999999999999999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------  165 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------  165 (263)
                      |+++++|.+++.... .+++..+..++.|++.||+|||.++++||||||+||+.+..                       
T Consensus        82 ~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~  160 (350)
T cd05573          82 YMPGGDLMNLLIRKD-VFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYY  160 (350)
T ss_pred             CCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCccccc
Confidence            999999999998763 48899999999999999999999999999999999984321                       


Q ss_pred             -----------------------------ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchh
Q 039276          166 -----------------------------TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTL  204 (263)
Q Consensus       166 -----------------------------~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~  204 (263)
                                                   ..||+.|+||            |||||||++|||++|+.||...... ...
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~-~~~  239 (350)
T cd05573         161 LNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQ-ETY  239 (350)
T ss_pred             ccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHH-HHH
Confidence                                         2478889999            9999999999999999998643211 000


Q ss_pred             hhHhhhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCC-ccCC
Q 039276          205 KHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRIN-AKEM  263 (263)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt-~~ev  263 (263)
                      ...            ..    .......+....+++++.+++.+|+. +|.+||+ ++++
T Consensus       240 ~~i------------~~----~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~l  282 (350)
T cd05573         240 NKI------------IN----WKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEI  282 (350)
T ss_pred             HHH------------hc----cCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHH
Confidence            000            00    00001111122357779999999998 9999999 7654

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=100.00  E-value=1.1e-35  Score=251.62  Aligned_cols=227  Identities=19%  Similarity=0.277  Sum_probs=165.7

Q ss_pred             ccceeccc--CceEEEEEE-ecCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           36 ESNLISRG--GFGSIYKAK-IQDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        36 ~~~~lg~g--~~g~v~~~~-~~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      ..++||+|  +|++||++. ..+++.||+|.+....  ......+.+|+++++.++||||+++++++...+..++|+||+
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~   81 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM   81 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence            35678999  778999998 5678999999997653  223456778999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhhC-CCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc-----------------------
Q 039276          111 PHGSLGKCLSTS-NYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT-----------------------  166 (263)
Q Consensus       111 ~~~~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~-----------------------  166 (263)
                      ++++|.+++... ...+++..++.++.|++.||+|||+++++|+||||+||+.+...                       
T Consensus        82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~~  161 (327)
T cd08227          82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRVV  161 (327)
T ss_pred             CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhcccccccccccc
Confidence            999999998753 23378899999999999999999999999999999999854211                       


Q ss_pred             -------cccccccCc--------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchh-------h
Q 039276          167 -------LATISYMAP--------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVM-------K  218 (263)
Q Consensus       167 -------~g~~~y~aP--------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~-------~  218 (263)
                             .++..|+||              |||||||+++||++|+.||............ .....+....       .
T Consensus       162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  240 (327)
T cd08227         162 HDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEK-LNGTVPCLLDTTTIPAEE  240 (327)
T ss_pred             ccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHH-hcCCccccccccchhhhh
Confidence                   234558888              9999999999999999999753222111111 1100000000       0


Q ss_pred             h--------hhh-----------cccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          219 V--------VSA-----------NLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       219 ~--------~~~-----------~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .        .+.           ..........+....+++++.+++.+||+.||++|||++||
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~el  304 (327)
T cd08227         241 LTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTL  304 (327)
T ss_pred             cccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHH
Confidence            0        000           00000000011223456789999999999999999999875

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=100.00  E-value=1.2e-35  Score=251.83  Aligned_cols=165  Identities=19%  Similarity=0.247  Sum_probs=143.6

Q ss_pred             ccccccceecccCceEEEEEEec-CCceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ-DGMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~-~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      ++|+..+.||+|+||.||++... ++..+++|.+.... ......+.+|+++++.++|+||+++++++.+.+..+++|||
T Consensus         5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   84 (333)
T cd06650           5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH   84 (333)
T ss_pred             hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEec
Confidence            45999999999999999999954 58888999887652 23456688999999999999999999999999999999999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccC-CccccccCCCccccccc---------------------cc
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFG-HSTHLLLKEDQSLTQIQ---------------------TL  167 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~h~dlk~~nil~~~~---------------------~~  167 (263)
                      +++++|.+++..... +++..+..++.+++.||.|||+. +++|+||||+||+.+..                     ..
T Consensus        85 ~~~~~L~~~l~~~~~-~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~  163 (333)
T cd06650          85 MDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV  163 (333)
T ss_pred             CCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhccccCC
Confidence            999999999976544 78888899999999999999975 79999999999995431                     24


Q ss_pred             ccccccCc------------chhhHHHHHHHHHhCCCCCccc
Q 039276          168 ATISYMAP------------DTYNFGIMIMETFSGKKPTIKF  197 (263)
Q Consensus       168 g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~  197 (263)
                      |+..|+||            |||||||++|+|++|+.||...
T Consensus       164 ~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~  205 (333)
T cd06650         164 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPP  205 (333)
T ss_pred             CCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence            67889999            9999999999999999998643

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=4.9e-36  Score=265.54  Aligned_cols=212  Identities=17%  Similarity=0.177  Sum_probs=169.0

Q ss_pred             ccccccceecccCceEEEEEEe-cC-CceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QD-GMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~-~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      ..|...+.||+|++|.||++.. .+ +..|++|.+..........+..|+++++.++||||+++++++.+.+..|+||||
T Consensus        67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~  146 (478)
T PTZ00267         67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEY  146 (478)
T ss_pred             eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEEC
Confidence            3499999999999999999983 34 678889887666555556777899999999999999999999999999999999


Q ss_pred             cCCCCHhhhhhhC---CCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc---------------------
Q 039276          110 MPHGSLGKCLSTS---NYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ---------------------  165 (263)
Q Consensus       110 ~~~~~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~---------------------  165 (263)
                      +++|+|.+++...   ...+++..+..++.|++.||.|||+++++||||||+||+++..                     
T Consensus       147 ~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~~  226 (478)
T PTZ00267        147 GSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLD  226 (478)
T ss_pred             CCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCccccc
Confidence            9999999887542   2337888899999999999999999999999999999984321                     


Q ss_pred             ----ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccc
Q 039276          166 ----TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSRED  229 (263)
Q Consensus       166 ----~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (263)
                          ..||+.|+||            |||||||++|||++|+.||.....     ...            ........  
T Consensus       227 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~-----~~~------------~~~~~~~~--  287 (478)
T PTZ00267        227 VASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ-----REI------------MQQVLYGK--  287 (478)
T ss_pred             cccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH-----HHH------------HHHHHhCC--
Confidence                2378889999            999999999999999999853211     011            11100000  


Q ss_pred             ccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          230 EHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       230 ~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                       ..+.+..++.++.+++.+||+.+|++|||++++
T Consensus       288 -~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~  320 (478)
T PTZ00267        288 -YDPFPCPVSSGMKALLDPLLSKNPALRPTTQQL  320 (478)
T ss_pred             -CCCCCccCCHHHHHHHHHHhccChhhCcCHHHH
Confidence             011233456779999999999999999998763

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-35  Score=252.56  Aligned_cols=214  Identities=20%  Similarity=0.233  Sum_probs=177.9

Q ss_pred             cccccccceecccCceEEEEEE-ecCCceEEEEEeecCCCc---hHHHHHHHHHHHhhcC-CCcceeEeeEeecCCeeEE
Q 039276           31 LFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGG---AFKNLDVECNMMKIIR-HQNLIKIISSCSKDDFKAL  105 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~---~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~l  105 (263)
                      ...|+..+.||+|.||.||++. ..+|+.+|+|.+.+....   ....+.+|+++++++. ||||+.+.+++.+....++
T Consensus        34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l  113 (382)
T KOG0032|consen   34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL  113 (382)
T ss_pred             cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence            4569999999999999999999 556999999999877433   3467889999999998 9999999999999999999


Q ss_pred             EEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc---------------------
Q 039276          106 ILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI---------------------  164 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~---------------------  164 (263)
                      |||+|.||.|.+.+... . +++..+..++.|++.++.|||..|++|||+||+|++...                     
T Consensus       114 vmEL~~GGeLfd~i~~~-~-~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~  191 (382)
T KOG0032|consen  114 VMELCEGGELFDRIVKK-H-YSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP  191 (382)
T ss_pred             EEEecCCchHHHHHHHc-c-CCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccC
Confidence            99999999999999876 3 899999999999999999999999999999999999322                     


Q ss_pred             -----cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccc
Q 039276          165 -----QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSR  227 (263)
Q Consensus       165 -----~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (263)
                           ..+||+.|+||            ||||+||++|.|++|.+||.........+             .+...    .
T Consensus       192 ~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~-------------~i~~~----~  254 (382)
T KOG0032|consen  192 GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL-------------AILRG----D  254 (382)
T ss_pred             CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH-------------HHHcC----C
Confidence                 23789999999            99999999999999999986432221111             11111    1


Q ss_pred             ccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          228 EDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       228 ~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ..-..+....+++.+.+++++|+..||..|+|+.++
T Consensus       255 ~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~  290 (382)
T KOG0032|consen  255 FDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQA  290 (382)
T ss_pred             CCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHH
Confidence            111122356778889999999999999999998763

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=6.5e-37  Score=271.08  Aligned_cols=212  Identities=28%  Similarity=0.467  Sum_probs=176.3

Q ss_pred             ccccccceecccCceEEEEEEec------CCceEEEEEeecCCCc-hHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ------DGMEVVVKGFNLQYGG-AFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKA  104 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~------~~~~v~vK~~~~~~~~-~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~  104 (263)
                      ...+..+.||+|.||+||+|...      +.+.||||.++..... .++.|.+|++++..++|||||+++|+|.+++..+
T Consensus       486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~  565 (774)
T KOG1026|consen  486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLC  565 (774)
T ss_pred             hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeE
Confidence            34777889999999999999843      3567999999887555 7888999999999999999999999999999999


Q ss_pred             EEEeccCCCCHhhhhhhCC---------C----cccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc-----
Q 039276          105 LILECMPHGSLGKCLSTSN---------Y----ILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT-----  166 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~---------~----~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~-----  166 (263)
                      +|+|||..|||.+|+....         .    .++..+.+.|+.||+.||+||-++.+|||||-.+|.|.....     
T Consensus       566 MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VKIs  645 (774)
T KOG1026|consen  566 MVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVVKIS  645 (774)
T ss_pred             EEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccceEEEec
Confidence            9999999999999997421         1    167788999999999999999999999999999999955432     


Q ss_pred             --------------------cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCC
Q 039276          167 --------------------LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLP  213 (263)
Q Consensus       167 --------------------~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~  213 (263)
                                          .-...||||            |||||||+|||+++ |+.||....++             
T Consensus       646 DfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~-------------  712 (774)
T KOG1026|consen  646 DFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQ-------------  712 (774)
T ss_pred             ccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchH-------------
Confidence                                126669999            99999999999999 99998764332             


Q ss_pred             CchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          214 NSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                       ++.+.+....      -.+.+.+|+.++.+||..||+.+|++||+++||
T Consensus       713 -EVIe~i~~g~------lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI  755 (774)
T KOG1026|consen  713 -EVIECIRAGQ------LLSCPENCPTEVYSLMLECWNENPKRRPSFKEI  755 (774)
T ss_pred             -HHHHHHHcCC------cccCCCCCCHHHHHHHHHHhhcCcccCCCHHHH
Confidence             2222221111      123588999999999999999999999999875

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=100.00  E-value=5.3e-36  Score=258.69  Aligned_cols=208  Identities=17%  Similarity=0.265  Sum_probs=163.7

Q ss_pred             cccccceecccCceEEEEEE-ecCCceEEEEEeecCC---CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEe
Q 039276           33 LFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      .|+..+.||+|+||.||+|. ..+++.+|+|++....   ......+.+|+.+++.++|+||+++++.+.+.+..++|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E   81 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD   81 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence            48889999999999999998 4568899999997542   2334567789999999999999999999999999999999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------  165 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------  165 (263)
                      |+++|+|.+++...+. +++..+..++.|++.||+|||+++|+||||||+||+++..                       
T Consensus        82 ~~~gg~L~~~l~~~~~-~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~  160 (382)
T cd05625          82 YIPGGDMMSLLIRMGI-FPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYY  160 (382)
T ss_pred             CCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCcccccccccccc
Confidence            9999999999876543 7888889999999999999999999999999999994321                       


Q ss_pred             -----------------------------------------------ccccccccCc------------chhhHHHHHHH
Q 039276          166 -----------------------------------------------TLATISYMAP------------DTYNFGIMIME  186 (263)
Q Consensus       166 -----------------------------------------------~~g~~~y~aP------------Dv~SlG~il~e  186 (263)
                                                                     ..||+.|+||            |||||||++||
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~e  240 (382)
T cd05625         161 QSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYE  240 (382)
T ss_pred             ccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHH
Confidence                                                           2478889999            99999999999


Q ss_pred             HHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCC
Q 039276          187 TFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRIN  259 (263)
Q Consensus       187 ll~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt  259 (263)
                      |++|+.||...... ....            .+..    .......+....+++++.+++.+|+ .+|.+|++
T Consensus       241 lltG~~Pf~~~~~~-~~~~------------~i~~----~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~  295 (382)
T cd05625         241 MLVGQPPFLAQTPL-ETQM------------KVIN----WQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLG  295 (382)
T ss_pred             HHhCCCCCCCCCHH-HHHH------------HHHc----cCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCC
Confidence            99999998642111 0000            0000    0000111122345667888888876 49999987

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=100.00  E-value=1.2e-35  Score=248.73  Aligned_cols=219  Identities=19%  Similarity=0.314  Sum_probs=164.2

Q ss_pred             ccccccceecccCceEEEEEEecC-----------------CceEEEEEeecCCC-chHHHHHHHHHHHhhcCCCcceeE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQD-----------------GMEVVVKGFNLQYG-GAFKNLDVECNMMKIIRHQNLIKI   93 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~-----------------~~~v~vK~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~   93 (263)
                      .+|...+.||+|+||.||+|.+.+                 +..||+|.+..... .....+.+|++++..++|+||+++
T Consensus         5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~   84 (304)
T cd05096           5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL   84 (304)
T ss_pred             hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence            458889999999999999997432                 34699999876532 345678899999999999999999


Q ss_pred             eeEeecCCeeEEEEeccCCCCHhhhhhhCC------------------CcccHHHHHHHHHHHHHHHHHhccCCcccccc
Q 039276           94 ISSCSKDDFKALILECMPHGSLGKCLSTSN------------------YILDFFQRLHIMIDVASAVEYLHFGHSTHLLL  155 (263)
Q Consensus        94 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~------------------~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dl  155 (263)
                      ++++.+.+..+++|||+++++|.+++....                  ..+++..+..++.|++.||+|||+.+++|+||
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~dl  164 (304)
T cd05096          85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDL  164 (304)
T ss_pred             EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCc
Confidence            999998889999999999999999886432                  12566788899999999999999999999999


Q ss_pred             CCCcccccccc-------------------------cccccccCc------------chhhHHHHHHHHHh--CCCCCcc
Q 039276          156 KEDQSLTQIQT-------------------------LATISYMAP------------DTYNFGIMIMETFS--GKKPTIK  196 (263)
Q Consensus       156 k~~nil~~~~~-------------------------~g~~~y~aP------------Dv~SlG~il~ell~--g~~Pf~~  196 (263)
                      ||+||+.+...                         .++..|+||            |||||||++|||++  +..||..
T Consensus       165 kp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~  244 (304)
T cd05096         165 ATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGE  244 (304)
T ss_pred             chhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCc
Confidence            99999954321                         225679999            99999999999987  5667654


Q ss_pred             ccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          197 FFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ... ...+..... .        .....   .......+..+++.+.+++.+||+.+|++|||+.+|
T Consensus       245 ~~~-~~~~~~~~~-~--------~~~~~---~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i  298 (304)
T cd05096         245 LTD-EQVIENAGE-F--------FRDQG---RQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDI  298 (304)
T ss_pred             CCH-HHHHHHHHH-H--------hhhcc---ccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHH
Confidence            311 111111000 0        00000   000011233556779999999999999999999875

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.8e-36  Score=248.60  Aligned_cols=209  Identities=19%  Similarity=0.279  Sum_probs=175.3

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCCC---chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYG---GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~---~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      -+|+..+.||.|.||+|-++. ...|+.||||.+.++..   ++.-.+.+||+++..++||||+.++.+|.......|||
T Consensus        53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM  132 (668)
T KOG0611|consen   53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM  132 (668)
T ss_pred             hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence            469999999999999999998 57799999999987643   44556678999999999999999999999999999999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc----------------------c
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI----------------------Q  165 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~----------------------~  165 (263)
                      ||..+|.|.+|+.+.+. +++.....++.||+.|+.|+|.++++|||||.+|||++.                      +
T Consensus       133 EYaS~GeLYDYiSer~~-LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~kfLqT  211 (668)
T KOG0611|consen  133 EYASGGELYDYISERGS-LSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKKFLQT  211 (668)
T ss_pred             EecCCccHHHHHHHhcc-ccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhccccHHHH
Confidence            99999999999988765 899999999999999999999999999999999999654                      3


Q ss_pred             ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccc
Q 039276          166 TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHF  232 (263)
Q Consensus       166 ~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (263)
                      ..|++.|.+|             |.|||||+||-|+.|..||+...+.              .....+....+.      
T Consensus       212 FCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk--------------~lvrQIs~GaYr------  271 (668)
T KOG0611|consen  212 FCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHK--------------RLVRQISRGAYR------  271 (668)
T ss_pred             hcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHH--------------HHHHHhhccccc------
Confidence            4789999999             9999999999999999999854211              111111111111      


Q ss_pred             cchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          233 MTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       233 ~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                        .+.-+.++.-||++||-.||+.|.|+.+|
T Consensus       272 --EP~~PSdA~gLIRwmLmVNP~RRATieDi  300 (668)
T KOG0611|consen  272 --EPETPSDASGLIRWMLMVNPERRATIEDI  300 (668)
T ss_pred             --CCCCCchHHHHHHHHHhcCcccchhHHHH
Confidence              12234457889999999999999998875

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=100.00  E-value=4.1e-36  Score=246.15  Aligned_cols=208  Identities=25%  Similarity=0.452  Sum_probs=159.9

Q ss_pred             ccceecccCceEEEEEEec-----CCceEEEEEeecCCC-chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           36 ESNLISRGGFGSIYKAKIQ-----DGMEVVVKGFNLQYG-GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        36 ~~~~lg~g~~g~v~~~~~~-----~~~~v~vK~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      ..+.||.|.||.||+|.+.     .+..|+||.++.... ...+.+.+|++.+++++|+||+++++++...+..++|+||
T Consensus         3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~   82 (259)
T PF07714_consen    3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY   82 (259)
T ss_dssp             EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred             EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence            4678999999999999965     367899999966433 3478889999999999999999999999988889999999


Q ss_pred             cCCCCHhhhhhhC-CCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc----------------------
Q 039276          110 MPHGSLGKCLSTS-NYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT----------------------  166 (263)
Q Consensus       110 ~~~~~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~----------------------  166 (263)
                      +++|+|.+++... ...+++..++.++.|++.||+|||+++++|++|+++||+.+...                      
T Consensus        83 ~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~~  162 (259)
T PF07714_consen   83 CPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKND  162 (259)
T ss_dssp             -TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEES
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            9999999999886 44489999999999999999999999999999999999954321                      


Q ss_pred             ---cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccc
Q 039276          167 ---LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDE  230 (263)
Q Consensus       167 ---~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (263)
                         .+...|+||            ||||||++++|+++ |+.||...... ......                   ....
T Consensus       163 ~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~-~~~~~~-------------------~~~~  222 (259)
T PF07714_consen  163 SSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNE-EIIEKL-------------------KQGQ  222 (259)
T ss_dssp             TTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHH-HHHHHH-------------------HTTE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccc-cccccc-------------------cccc
Confidence               245668898            99999999999999 78887543111 000000                   1111


Q ss_pred             cccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          231 HFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       231 ~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +.+.+..++..+.+++.+||..+|++|||+++|
T Consensus       223 ~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i  255 (259)
T PF07714_consen  223 RLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEI  255 (259)
T ss_dssp             ETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHH
T ss_pred             cceeccchhHHHHHHHHHHcCCChhhCcCHHHH
Confidence            122345567779999999999999999999864

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.7e-36  Score=255.43  Aligned_cols=212  Identities=20%  Similarity=0.230  Sum_probs=177.1

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCCC--chHHHHHHHHHHHhhcCCCcceeEeeEeecCCe-eEEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYG--GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDF-KALIL  107 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~--~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~-~~lv~  107 (263)
                      +.|...+.+|+|+||.++..+ ..+...+++|.+.....  ..+....+|+.+++++.||||+.+.+.|.+++. .+|+|
T Consensus         4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm   83 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM   83 (426)
T ss_pred             chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence            459999999999999999988 55688999999987743  344467789999999999999999999988776 99999


Q ss_pred             eccCCCCHhhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccc-----------------------
Q 039276          108 ECMPHGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQ-----------------------  163 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~-----------------------  163 (263)
                      +||+||++.+.+...+ ..+++.++..++.|++.|++|||++.|+|||||+.||++.                       
T Consensus        84 ~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~a  163 (426)
T KOG0589|consen   84 EYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSLA  163 (426)
T ss_pred             eecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCchhhh
Confidence            9999999999998765 4489999999999999999999999999999999999932                       


Q ss_pred             ccccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccc
Q 039276          164 IQTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEH  231 (263)
Q Consensus       164 ~~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (263)
                      ++.+||+.|++|            |||||||++|||++-+.+|...             ...+-+.++....       .
T Consensus       164 ~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~-------------~m~~Li~ki~~~~-------~  223 (426)
T KOG0589|consen  164 STVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKAS-------------NMSELILKINRGL-------Y  223 (426)
T ss_pred             heecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCcc-------------chHHHHHHHhhcc-------C
Confidence            246899999999            9999999999999999998642             1111122222222       1


Q ss_pred             ccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          232 FMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       232 ~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .+.+...+.+++.++..|++.+|..||++.+|
T Consensus       224 ~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~L  255 (426)
T KOG0589|consen  224 SPLPSMYSSELRSLVKSMLRKNPEHRPSALEL  255 (426)
T ss_pred             CCCCccccHHHHHHHHHHhhcCCccCCCHHHH
Confidence            23467778889999999999999999999764

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=100.00  E-value=5.2e-36  Score=256.13  Aligned_cols=210  Identities=21%  Similarity=0.261  Sum_probs=165.3

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCCC-chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYG-GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      ..|+..+.||+|+||.||++. ..+++.||+|++..... .....+.+|+++++.++|+||+++++++.+.+..++++||
T Consensus        74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  153 (353)
T PLN00034         74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF  153 (353)
T ss_pred             HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence            568889999999999999998 44689999999965432 3456788999999999999999999999999999999999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-----------------------cc
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-----------------------QT  166 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-----------------------~~  166 (263)
                      +++++|....     ...+..+..++.|++.||+|||+++++||||||+||+++.                       ..
T Consensus       154 ~~~~~L~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~  228 (353)
T PLN00034        154 MDGGSLEGTH-----IADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNSS  228 (353)
T ss_pred             CCCCcccccc-----cCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceeccccccccccc
Confidence            9999986532     2456777889999999999999999999999999999432                       12


Q ss_pred             cccccccCc-----------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccc
Q 039276          167 LATISYMAP-----------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSRED  229 (263)
Q Consensus       167 ~g~~~y~aP-----------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (263)
                      .|+..|+||                 |||||||++|||++|+.||.....+  .+......            ....   
T Consensus       229 ~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~--~~~~~~~~------------~~~~---  291 (353)
T PLN00034        229 VGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQG--DWASLMCA------------ICMS---  291 (353)
T ss_pred             ccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCc--cHHHHHHH------------Hhcc---
Confidence            567889998                 9999999999999999998732111  11111100            0000   


Q ss_pred             ccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          230 EHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       230 ~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .....+..++.++.+++.+||+.||++|||+.||
T Consensus       292 ~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~el  325 (353)
T PLN00034        292 QPPEAPATASREFRHFISCCLQREPAKRWSAMQL  325 (353)
T ss_pred             CCCCCCCccCHHHHHHHHHHccCChhhCcCHHHH
Confidence            0011234566779999999999999999999874

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=100.00  E-value=6.3e-36  Score=253.28  Aligned_cols=207  Identities=15%  Similarity=0.218  Sum_probs=162.5

Q ss_pred             ceecccCceEEEEEE-ecCCceEEEEEeecC---CCchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCeeEEEEeccCC
Q 039276           38 NLISRGGFGSIYKAK-IQDGMEVVVKGFNLQ---YGGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFKALILECMPH  112 (263)
Q Consensus        38 ~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~---~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~  112 (263)
                      +.||+|+||.||++. ..+++.||+|+++..   .....+.+..|..+++.+ +||||+++++.+.+.+..|++|||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~   80 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG   80 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            368999999999998 456889999999764   223445677899999888 799999999999999999999999999


Q ss_pred             CCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------cccc
Q 039276          113 GSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------TLAT  169 (263)
Q Consensus       113 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------~~g~  169 (263)
                      ++|..++..... +++..+..++.|++.||+|||.++++||||||+||+.+..                       ..|+
T Consensus        81 g~L~~~~~~~~~-l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt  159 (329)
T cd05588          81 GDLMFHMQRQRK-LPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFCGT  159 (329)
T ss_pred             CCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccCCCccccccCC
Confidence            999998876544 8999999999999999999999999999999999985321                       2468


Q ss_pred             ccccCc------------chhhHHHHHHHHHhCCCCCccccCCC---chhhhHhhhcCCCchhhhhhhcccccccccccc
Q 039276          170 ISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGE---MTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT  234 (263)
Q Consensus       170 ~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (263)
                      +.|+||            |||||||++|+|++|+.||......+   .....+..        ..+    ...   ....
T Consensus       160 ~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~--------~~~----~~~---~~~~  224 (329)
T cd05588         160 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLF--------QVI----LEK---QIRI  224 (329)
T ss_pred             ccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHH--------HHH----HcC---CCCC
Confidence            889999            99999999999999999996421111   00011100        000    000   0112


Q ss_pred             hHHHHHHHHHhhccccccCcCCCCCc
Q 039276          235 KEQCMSFVFNLAMECTVESPNQRINA  260 (263)
Q Consensus       235 ~~~~~~~l~~l~~~cl~~~p~~Rpt~  260 (263)
                      +..++.++.+++.+||+.||++|||+
T Consensus       225 p~~~~~~~~~li~~~L~~dP~~R~~~  250 (329)
T cd05588         225 PRSLSVKASSVLKGFLNKDPKERLGC  250 (329)
T ss_pred             CCCCCHHHHHHHHHHhccCHHHcCCC
Confidence            34556779999999999999999984

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=100.00  E-value=1.1e-35  Score=255.15  Aligned_cols=163  Identities=21%  Similarity=0.278  Sum_probs=143.8

Q ss_pred             cccccceecccCceEEEEEE-ecCCceEEEEEeecCC---CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEe
Q 039276           33 LFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      +|+..+.||+|+||.||++. ..+++.||+|++....   ......+..|+.++..++|++|+++++.+.+....|+|||
T Consensus         2 ~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E   81 (363)
T cd05628           2 DFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIME   81 (363)
T ss_pred             CceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEc
Confidence            58889999999999999998 4568999999997542   2334567789999999999999999999999999999999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc------------------------
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI------------------------  164 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~------------------------  164 (263)
                      |+++|+|.+++..... +++..+..++.|++.||+|||+++++||||||+||+++.                        
T Consensus        82 ~~~gg~L~~~l~~~~~-l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~  160 (363)
T cd05628          82 FLPGGDMMTLLMKKDT-LTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFY  160 (363)
T ss_pred             CCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCccccccccccccc
Confidence            9999999999976554 889999999999999999999999999999999999421                        


Q ss_pred             ----------------------------------cccccccccCc------------chhhHHHHHHHHHhCCCCCcc
Q 039276          165 ----------------------------------QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIK  196 (263)
Q Consensus       165 ----------------------------------~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~  196 (263)
                                                        ...||+.|+||            |||||||++|||++|+.||..
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~  238 (363)
T cd05628         161 RNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS  238 (363)
T ss_pred             ccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCC
Confidence                                              12578899999            999999999999999999864

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=100.00  E-value=2.8e-36  Score=255.53  Aligned_cols=213  Identities=18%  Similarity=0.225  Sum_probs=169.7

Q ss_pred             cccccceecccCceEEEEEE-ecCCceEEEEEeecCC---CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEe
Q 039276           33 LFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      +|...+.||+|+||.||++. ..++..||+|.+....   ....+.+.+|+.+++.++|+||+++++.+.+....++|||
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (330)
T cd05601           2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVME   81 (330)
T ss_pred             CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEEC
Confidence            48889999999999999998 4568999999998652   2345567789999999999999999999999899999999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------  165 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------  165 (263)
                      |+++++|.+++......+++..+..++.|++.||+|||+++++||||||+||+.+..                       
T Consensus        82 ~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~  161 (330)
T cd05601          82 YQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNSK  161 (330)
T ss_pred             CCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCceeee
Confidence            999999999998764558999999999999999999999999999999999984321                       


Q ss_pred             -ccccccccCc------------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccc
Q 039276          166 -TLATISYMAP------------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLS  226 (263)
Q Consensus       166 -~~g~~~y~aP------------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (263)
                       ..|++.|+||                  |||||||++|||++|+.||...... ..+.....            .    
T Consensus       162 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~-~~~~~i~~------------~----  224 (330)
T cd05601         162 LPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSA-KTYNNIMN------------F----  224 (330)
T ss_pred             cccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHH-HHHHHHHc------------C----
Confidence             1467889988                  9999999999999999998642110 11111110            0    


Q ss_pred             cccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          227 REDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       227 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ......+....+++++.+++.+|++ +|++|||++++
T Consensus       225 ~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l  260 (330)
T cd05601         225 QRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGL  260 (330)
T ss_pred             CCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHH
Confidence            0001112233466779999999998 99999998764

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=100.00  E-value=6.4e-36  Score=257.26  Aligned_cols=213  Identities=19%  Similarity=0.308  Sum_probs=165.1

Q ss_pred             ccccccceecccCceEEEEEEec------CCceEEEEEeecCC-CchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCee
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ------DGMEVVVKGFNLQY-GGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFK  103 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~------~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~  103 (263)
                      .+|+..+.||+|+||.||++.+.      ++..||+|.+.... ......+.+|+++++.+ +|+||+++++.+...+..
T Consensus        38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~  117 (374)
T cd05106          38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPV  117 (374)
T ss_pred             HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCe
Confidence            35999999999999999998732      23579999997653 23456688899999999 899999999999999999


Q ss_pred             EEEEeccCCCCHhhhhhhCC------------------------------------------------------------
Q 039276          104 ALILECMPHGSLGKCLSTSN------------------------------------------------------------  123 (263)
Q Consensus       104 ~lv~e~~~~~~L~~~l~~~~------------------------------------------------------------  123 (263)
                      +++|||+++|+|.+++....                                                            
T Consensus       118 ~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (374)
T cd05106         118 LVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDS  197 (374)
T ss_pred             EEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccccc
Confidence            99999999999999885421                                                            


Q ss_pred             ---------CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc-------------------------ccc
Q 039276          124 ---------YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT-------------------------LAT  169 (263)
Q Consensus       124 ---------~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~-------------------------~g~  169 (263)
                               ..+++..+..++.|++.||+|||+++++||||||+||+.+...                         .++
T Consensus       198 ~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~  277 (374)
T cd05106         198 KDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLP  277 (374)
T ss_pred             cchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCc
Confidence                     1256778899999999999999999999999999999954211                         123


Q ss_pred             ccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchH
Q 039276          170 ISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKE  236 (263)
Q Consensus       170 ~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (263)
                      ..|+||            |||||||++|||++ |+.||........ +...            .....      ....+.
T Consensus       278 ~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~-~~~~------------~~~~~------~~~~~~  338 (374)
T cd05106         278 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSK-FYKM------------VKRGY------QMSRPD  338 (374)
T ss_pred             cceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHH-HHHH------------HHccc------CccCCC
Confidence            569999            99999999999997 9999865322111 1111            10000      111122


Q ss_pred             HHHHHHHHhhccccccCcCCCCCccCC
Q 039276          237 QCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       237 ~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .+++++.+++.+||+.+|++|||+.+|
T Consensus       339 ~~~~~l~~li~~cl~~dp~~RPs~~~l  365 (374)
T cd05106         339 FAPPEIYSIMKMCWNLEPTERPTFSQI  365 (374)
T ss_pred             CCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence            345679999999999999999999874

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=100.00  E-value=6.5e-36  Score=244.88  Aligned_cols=214  Identities=21%  Similarity=0.342  Sum_probs=174.0

Q ss_pred             ccccccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           30 GLFLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        30 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      +..+|...+.||.|++|.||+|...++..+++|.+..........+..|+.+++.++|+|++++++++.+....+++|||
T Consensus         4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   83 (261)
T cd05148           4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL   83 (261)
T ss_pred             cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEee
Confidence            34569999999999999999999777899999999877655667788999999999999999999999999999999999


Q ss_pred             cCCCCHhhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc----------------------
Q 039276          110 MPHGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT----------------------  166 (263)
Q Consensus       110 ~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~----------------------  166 (263)
                      +++++|.+++.... ..+++.++..++.|++.||+|||+++++|+||+|+||+.+.+.                      
T Consensus        84 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~~  163 (261)
T cd05148          84 MEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSD  163 (261)
T ss_pred             cccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCccccccC
Confidence            99999999997633 3478899999999999999999999999999999999964321                      


Q ss_pred             -cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccc
Q 039276          167 -LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHF  232 (263)
Q Consensus       167 -~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (263)
                       .++..|++|            ||||||+++++|++ |+.||.... ....+....                   ...+.
T Consensus       164 ~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~-~~~~~~~~~-------------------~~~~~  223 (261)
T cd05148         164 KKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMN-NHEVYDQIT-------------------AGYRM  223 (261)
T ss_pred             CCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCC-HHHHHHHHH-------------------hCCcC
Confidence             234568888            99999999999998 899985321 111111110                   01111


Q ss_pred             cchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          233 MTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       233 ~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +.+..+++++.+++.+||+.+|++|||+.+|
T Consensus       224 ~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l  254 (261)
T cd05148         224 PCPAKCPQEIYKIMLECWAAEPEDRPSFKAL  254 (261)
T ss_pred             CCCCCCCHHHHHHHHHHcCCCchhCcCHHHH
Confidence            2344566779999999999999999999864

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=100.00  E-value=7.9e-36  Score=256.42  Aligned_cols=213  Identities=17%  Similarity=0.183  Sum_probs=168.4

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecC---CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQ---YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      ..|+..+.||+|+||.||++. ..++..||+|++...   .......+.+|+.+++.++|+||+++++.+.+....++||
T Consensus        43 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv~  122 (370)
T cd05596          43 EDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMVM  122 (370)
T ss_pred             HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEE
Confidence            469999999999999999998 456889999999753   2233445678999999999999999999999999999999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-----------------------
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-----------------------  164 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-----------------------  164 (263)
                      ||+++|+|.+++...  .+++..+..++.|++.||+|||+++++||||||+||+.+.                       
T Consensus       123 Ey~~gg~L~~~l~~~--~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~~~  200 (370)
T cd05596         123 EYMPGGDLVNLMSNY--DIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVRC  200 (370)
T ss_pred             cCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCcccC
Confidence            999999999988654  3788888899999999999999999999999999999532                       


Q ss_pred             -cccccccccCc----------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccc
Q 039276          165 -QTLATISYMAP----------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSR  227 (263)
Q Consensus       165 -~~~g~~~y~aP----------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (263)
                       ...|++.|+||                |||||||++|||++|+.||..... ...+...            ..    ..
T Consensus       201 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~-~~~~~~i------------~~----~~  263 (370)
T cd05596         201 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL-VGTYSKI------------MD----HK  263 (370)
T ss_pred             CCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCH-HHHHHHH------------Hc----CC
Confidence             12478889998                999999999999999999864211 0011111            10    00


Q ss_pred             ccccccchHHHHHHHHHhhccccccCcCC--CCCccCC
Q 039276          228 EDEHFMTKEQCMSFVFNLAMECTVESPNQ--RINAKEM  263 (263)
Q Consensus       228 ~~~~~~~~~~~~~~l~~l~~~cl~~~p~~--Rpt~~ev  263 (263)
                      .....+....++.++.+++.+||+.+|++  |+|++|+
T Consensus       264 ~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~el  301 (370)
T cd05596         264 NSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEI  301 (370)
T ss_pred             CcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHH
Confidence            01111222345778999999999999987  9998764

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=6.7e-36  Score=252.48  Aligned_cols=200  Identities=19%  Similarity=0.272  Sum_probs=160.1

Q ss_pred             ceecccCceEEEEEEe----cCCceEEEEEeecC----CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           38 NLISRGGFGSIYKAKI----QDGMEVVVKGFNLQ----YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        38 ~~lg~g~~g~v~~~~~----~~~~~v~vK~~~~~----~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      +.||+|+||.||++..    .+++.||+|.+...    .......+.+|+++++.++||||+++++.+.+.+..|++|||
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~   81 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY   81 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence            5799999999999974    24788999999753    223345567899999999999999999999999999999999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------c
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------T  166 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------~  166 (263)
                      +++++|.+++...+. +.+..+..++.|++.||+|||+++++||||||+||+.+..                       .
T Consensus        82 ~~~~~L~~~~~~~~~-~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~  160 (323)
T cd05584          82 LSGGELFMHLEREGI-FMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHTF  160 (323)
T ss_pred             CCCchHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCccccc
Confidence            999999999976554 7888888899999999999999999999999999995321                       2


Q ss_pred             cccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccc
Q 039276          167 LATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT  234 (263)
Q Consensus       167 ~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (263)
                      .|++.|+||            |||||||++|||++|+.||...... ..+...            ...        ....
T Consensus       161 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~-~~~~~~------------~~~--------~~~~  219 (323)
T cd05584         161 CGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRK-KTIDKI------------LKG--------KLNL  219 (323)
T ss_pred             CCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHH-HHHHHH------------HcC--------CCCC
Confidence            478889999            9999999999999999998642110 001100            000        0112


Q ss_pred             hHHHHHHHHHhhccccccCcCCCCC
Q 039276          235 KEQCMSFVFNLAMECTVESPNQRIN  259 (263)
Q Consensus       235 ~~~~~~~l~~l~~~cl~~~p~~Rpt  259 (263)
                      +..+++++.+++.+||+.+|++||+
T Consensus       220 ~~~~~~~~~~li~~~l~~~p~~R~~  244 (323)
T cd05584         220 PPYLTPEARDLLKKLLKRNPSSRLG  244 (323)
T ss_pred             CCCCCHHHHHHHHHHcccCHhHcCC
Confidence            3345667999999999999999993

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-36  Score=259.09  Aligned_cols=213  Identities=21%  Similarity=0.333  Sum_probs=173.2

Q ss_pred             ccccccceecccCceEEEEEEecCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      +.......||+|+||+||+|+|-.  .||||+++...  .+..+.|++|+.++++-+|-||+-+.|++-..+. .||+.+
T Consensus       392 ~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTqw  468 (678)
T KOG0193|consen  392 EEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIITQW  468 (678)
T ss_pred             HHhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeeehh
Confidence            347788899999999999999762  69999998874  3467889999999999999999999999988877 999999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc------------------------
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ------------------------  165 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~------------------------  165 (263)
                      |+|.+|..++......+...+...|+.|+++|+.|||.++|+|+|||..||++..+                        
T Consensus       469 CeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~~  548 (678)
T KOG0193|consen  469 CEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQLE  548 (678)
T ss_pred             ccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeeeeeeccccccC
Confidence            99999999998777678999999999999999999999999999999999995442                        


Q ss_pred             -ccccccccCc---------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccc
Q 039276          166 -TLATISYMAP---------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSRED  229 (263)
Q Consensus       166 -~~g~~~y~aP---------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (263)
                       ..|...||||               ||||||+++|||++|..||.........+..-             ...+.++. 
T Consensus       549 qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVG-------------rG~l~pd~-  614 (678)
T KOG0193|consen  549 QPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVG-------------RGYLMPDL-  614 (678)
T ss_pred             CCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEec-------------ccccCccc-
Confidence             1457779999               99999999999999999997322222222100             00000000 


Q ss_pred             ccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          230 EHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       230 ~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                        .....+|+.++.+|+..||..++++||++.+|
T Consensus       615 --s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~i  646 (678)
T KOG0193|consen  615 --SKIRSNCPKAMKRLLSDCWKFDREERPLFPQL  646 (678)
T ss_pred             --hhhhccCHHHHHHHHHHHHhcCcccCccHHHH
Confidence              01135778889999999999999999998754

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.4e-36  Score=243.62  Aligned_cols=235  Identities=19%  Similarity=0.203  Sum_probs=176.3

Q ss_pred             CcccccccccccceecccCceEEEEEE-ecCCceEEEEEee--cCCCchHHHHHHHHHHHhhcCCCcceeEeeEeec---
Q 039276           26 NNFSGLFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFN--LQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSK---   99 (263)
Q Consensus        26 ~~~~~~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~--~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~---   99 (263)
                      ..+.....|...+.||.|++|.|+.+. ..+|..||+|++.  .+..-..++..+|+.+++.++|+||+.+.+.+..   
T Consensus        16 ~~~~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~   95 (359)
T KOG0660|consen   16 ELFEIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSR   95 (359)
T ss_pred             eEEeccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccc
Confidence            334445667878999999999999998 5679999999997  4566678899999999999999999999999855   


Q ss_pred             --CCeeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccc--------------
Q 039276          100 --DDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQ--------------  163 (263)
Q Consensus       100 --~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~--------------  163 (263)
                        -+..|+|+|+|+ .+|.+.++.+.. +....+..++.|++.||+|+|+.+++||||||.|++.+              
T Consensus        96 ~~f~DvYiV~elMe-tDL~~iik~~~~-L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR  173 (359)
T KOG0660|consen   96 DKFNDVYLVFELME-TDLHQIIKSQQD-LTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLAR  173 (359)
T ss_pred             cccceeEEehhHHh-hHHHHHHHcCcc-ccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEecccccee
Confidence              246899999994 499999987654 88899999999999999999999999999999999932              


Q ss_pred             -----------ccccccccccCc-------------chhhHHHHHHHHHhCCCCCccccC--CCchhhhHhhhc------
Q 039276          164 -----------IQTLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFH--GEMTLKHWVNDL------  211 (263)
Q Consensus       164 -----------~~~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~--~~~~~~~~~~~~------  211 (263)
                                 +..+.|..|+||             ||||.|||+.||++|++-|.....  .-..+-......      
T Consensus       174 ~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~  253 (359)
T KOG0660|consen  174 YLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQ  253 (359)
T ss_pred             eccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHH
Confidence                       233568899999             999999999999999998863211  001111111111      


Q ss_pred             --CCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccC
Q 039276          212 --LPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKE  262 (263)
Q Consensus       212 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~e  262 (263)
                        .+......+...............+..++++.+|+.+||.+||.+|+|++|
T Consensus       254 ~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~e  306 (359)
T KOG0660|consen  254 KIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEE  306 (359)
T ss_pred             HhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHH
Confidence              111111111111111111111122577888999999999999999999876

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=100.00  E-value=1.6e-35  Score=242.24  Aligned_cols=211  Identities=20%  Similarity=0.289  Sum_probs=167.8

Q ss_pred             ccccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccC
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMP  111 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~  111 (263)
                      .+|...+.||+|++|.||.+.+.++..+++|.+.... .....+.+|++++++++|||++++++++.+....+++|||++
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   82 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS   82 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence            4588889999999999999987767779999887543 234678899999999999999999999988888999999999


Q ss_pred             CCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc------------------------c
Q 039276          112 HGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT------------------------L  167 (263)
Q Consensus       112 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~------------------------~  167 (263)
                      +++|.+++......+++..++.++.|++.||+|||+.+++|+||+|+||+.+.+.                        .
T Consensus        83 ~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~  162 (256)
T cd05113          83 NGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGSK  162 (256)
T ss_pred             CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCceeecCCCc
Confidence            9999999976554589999999999999999999999999999999999954321                        1


Q ss_pred             ccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccc
Q 039276          168 ATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT  234 (263)
Q Consensus       168 g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (263)
                      ++..|+||            |||||||++|+|++ |+.||...... ........            .       .+...
T Consensus       163 ~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~-~~~~~~~~------------~-------~~~~~  222 (256)
T cd05113         163 FPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNS-ETVEKVSQ------------G-------LRLYR  222 (256)
T ss_pred             cChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHH-HHHHHHhc------------C-------CCCCC
Confidence            23568888            99999999999998 99998532111 00000000            0       00111


Q ss_pred             hHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          235 KEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       235 ~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +...++.+.+++.+||+.+|.+|||+.+|
T Consensus       223 ~~~~~~~~~~li~~cl~~~p~~Rp~~~~l  251 (256)
T cd05113         223 PHLASEKVYAIMYSCWHEKAEERPTFQQL  251 (256)
T ss_pred             CCCCCHHHHHHHHHHcCCCcccCCCHHHH
Confidence            22345679999999999999999999764

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=100.00  E-value=3.9e-35  Score=242.64  Aligned_cols=207  Identities=16%  Similarity=0.224  Sum_probs=159.9

Q ss_pred             ecccCceEEEEEE-ecCCceEEEEEeecCC---CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccCCCCH
Q 039276           40 ISRGGFGSIYKAK-IQDGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSL  115 (263)
Q Consensus        40 lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L  115 (263)
                      ||+|+||.||++. ..+++.+++|.+....   .........|++++++++|+||+++.+.+.+....+++|||+++++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            6999999999998 4568999999986532   12234456699999999999999999999999999999999999999


Q ss_pred             hhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc----------------------ccccccc
Q 039276          116 GKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ----------------------TLATISY  172 (263)
Q Consensus       116 ~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~----------------------~~g~~~y  172 (263)
                      .+++.... ..+++..+..++.|++.||+|||+++++|+||||+||+.+..                      ..|+..|
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y  160 (277)
T cd05607          81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRAGTNGY  160 (277)
T ss_pred             HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccCCCCCc
Confidence            98876433 337888889999999999999999999999999999995321                      2467889


Q ss_pred             cCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHHHHH
Q 039276          173 MAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMS  240 (263)
Q Consensus       173 ~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (263)
                      +||            |||||||++|||++|+.||........ ......            .......   ......+++
T Consensus       161 ~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~-~~~~~~------------~~~~~~~---~~~~~~~~~  224 (277)
T cd05607         161 MAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVA-KEELKR------------RTLEDEV---KFEHQNFTE  224 (277)
T ss_pred             cCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhh-HHHHHH------------Hhhcccc---ccccccCCH
Confidence            999            999999999999999999864321100 000000            0000000   001234566


Q ss_pred             HHHHhhccccccCcCCCCCccC
Q 039276          241 FVFNLAMECTVESPNQRINAKE  262 (263)
Q Consensus       241 ~l~~l~~~cl~~~p~~Rpt~~e  262 (263)
                      ++.+++.+||+.||++||++.|
T Consensus       225 ~~~~li~~~L~~~P~~R~~~~~  246 (277)
T cd05607         225 ESKDICRLFLAKKPEDRLGSRE  246 (277)
T ss_pred             HHHHHHHHHhccCHhhCCCCcc
Confidence            7999999999999999999965

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=100.00  E-value=3.1e-35  Score=246.94  Aligned_cols=231  Identities=17%  Similarity=0.199  Sum_probs=170.4

Q ss_pred             cccccccceecccCceEEEEEEe-cCCceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEe
Q 039276           31 LFLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      ..+|...+.||+|+||.||+|+. .++..+|+|.+.... ......+.+|+++++.++|+|++++++++...+..+++||
T Consensus         5 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   84 (309)
T cd07872           5 METYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFE   84 (309)
T ss_pred             CCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEe
Confidence            35699999999999999999984 467889999997553 2234456789999999999999999999999999999999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------  165 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------  165 (263)
                      |+++ +|.+++......++...+..++.|++.||+|||+++++||||||+||+.+..                       
T Consensus        85 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~  163 (309)
T cd07872          85 YLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSN  163 (309)
T ss_pred             CCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCcccccc
Confidence            9976 8888887655557888899999999999999999999999999999985421                       


Q ss_pred             ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCC---chhhhhh------hc
Q 039276          166 TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPN---SVMKVVS------AN  223 (263)
Q Consensus       166 ~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~------~~  223 (263)
                      ..++..|+||             |||||||++++|++|+.||...... ..+..........   ....+..      ..
T Consensus       164 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (309)
T cd07872         164 EVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVE-DELHLIFRLLGTPTEETWPGISSNDEFKNYN  242 (309)
T ss_pred             ccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCCHHHHhhhcchhhhhhhh
Confidence            2356779999             9999999999999999999643211 1111111111000   0000000      00


Q ss_pred             cccccc-ccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          224 LLSRED-EHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       224 ~~~~~~-~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ...... ........+++++.+++.+||+.||.+|||++|+
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~  283 (309)
T cd07872         243 FPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEA  283 (309)
T ss_pred             cCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHH
Confidence            000000 0000123467789999999999999999999874

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=3.1e-36  Score=254.03  Aligned_cols=203  Identities=19%  Similarity=0.227  Sum_probs=162.8

Q ss_pred             ceecccCceEEEEEEe----cCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccC
Q 039276           38 NLISRGGFGSIYKAKI----QDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMP  111 (263)
Q Consensus        38 ~~lg~g~~g~v~~~~~----~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~  111 (263)
                      +.||+|+||.||++..    .+++.+|+|++....  .........|++++++++|+||+++++.+.+.+..|+||||++
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   81 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR   81 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence            5799999999999874    357899999997642  2234556789999999999999999999999999999999999


Q ss_pred             CCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------ccc
Q 039276          112 HGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------TLA  168 (263)
Q Consensus       112 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------~~g  168 (263)
                      +++|.+++..... +++..+..++.|++.||+|||+++++||||||+||+.+..                       ..|
T Consensus        82 ~~~L~~~l~~~~~-l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g  160 (318)
T cd05582          82 GGDLFTRLSKEVM-FTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCG  160 (318)
T ss_pred             CCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceecccC
Confidence            9999999876543 8999999999999999999999999999999999995321                       246


Q ss_pred             cccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchH
Q 039276          169 TISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKE  236 (263)
Q Consensus       169 ~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (263)
                      ++.|+||            |||||||++|||++|+.||...... ......            ...        ....+.
T Consensus       161 ~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~-~~~~~i------------~~~--------~~~~p~  219 (318)
T cd05582         161 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRK-ETMTMI------------LKA--------KLGMPQ  219 (318)
T ss_pred             ChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHH-HHHHHH------------HcC--------CCCCCC
Confidence            7889999            9999999999999999998642110 000000            000        001233


Q ss_pred             HHHHHHHHhhccccccCcCCCCCccC
Q 039276          237 QCMSFVFNLAMECTVESPNQRINAKE  262 (263)
Q Consensus       237 ~~~~~l~~l~~~cl~~~p~~Rpt~~e  262 (263)
                      .+++++.+++.+||+.||++|||+.+
T Consensus       220 ~~~~~~~~li~~~l~~~P~~R~~a~~  245 (318)
T cd05582         220 FLSPEAQSLLRALFKRNPANRLGAGP  245 (318)
T ss_pred             CCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence            45667899999999999999999765

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-35  Score=257.57  Aligned_cols=208  Identities=17%  Similarity=0.224  Sum_probs=172.2

Q ss_pred             ccccccccceecccCceEEEEEE-ecCCceEEEEEeecC---CCchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCeeE
Q 039276           30 GLFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQ---YGGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFKA  104 (263)
Q Consensus        30 ~~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~---~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~  104 (263)
                      ...+|.....||+|+||+|+++. ..+++.+|||.+++.   ...+....+.|-+++... +||.++.++..|++..++|
T Consensus       366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~  445 (694)
T KOG0694|consen  366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF  445 (694)
T ss_pred             cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence            34679999999999999999999 566889999999887   345677777888887777 5999999999999999999


Q ss_pred             EEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccc---------------------
Q 039276          105 LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQ---------------------  163 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~---------------------  163 (263)
                      +||||+.||++..+.+.  ..+++..+..+++.++.||+|||+++|++||||.+|||++                     
T Consensus       446 fvmey~~Ggdm~~~~~~--~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g~  523 (694)
T KOG0694|consen  446 FVMEYVAGGDLMHHIHT--DVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQGD  523 (694)
T ss_pred             EEEEecCCCcEEEEEec--ccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccCCCCC
Confidence            99999999995554433  3489999999999999999999999999999999999944                     


Q ss_pred             --ccccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccc
Q 039276          164 --IQTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSRED  229 (263)
Q Consensus       164 --~~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (263)
                        ++..||+.|+||            |.|||||++|||+.|..||..- .+++.+..+                +..+  
T Consensus       524 ~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gd-dEee~FdsI----------------~~d~--  584 (694)
T KOG0694|consen  524 RTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGD-DEEEVFDSI----------------VNDE--  584 (694)
T ss_pred             ccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCC-CHHHHHHHH----------------hcCC--
Confidence              345799999999            9999999999999999998631 111222211                1111  


Q ss_pred             ccccchHHHHHHHHHhhccccccCcCCCCCc
Q 039276          230 EHFMTKEQCMSFVFNLAMECTVESPNQRINA  260 (263)
Q Consensus       230 ~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~  260 (263)
                        ...|..++.++.++++++|..+|++|.-+
T Consensus       585 --~~yP~~ls~ea~~il~~ll~k~p~kRLG~  613 (694)
T KOG0694|consen  585 --VRYPRFLSKEAIAIMRRLLRKNPEKRLGS  613 (694)
T ss_pred             --CCCCCcccHHHHHHHHHHhccCcccccCC
Confidence              12366788889999999999999999876

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=100.00  E-value=1.3e-35  Score=250.77  Aligned_cols=205  Identities=19%  Similarity=0.254  Sum_probs=161.4

Q ss_pred             ccccceecccCceEEEEEE-ecCCceEEEEEeecCC---CchHHHHHHHHHHH---hhcCCCcceeEeeEeecCCeeEEE
Q 039276           34 FSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY---GGAFKNLDVECNMM---KIIRHQNLIKIISSCSKDDFKALI  106 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l---~~~~h~~i~~~~~~~~~~~~~~lv  106 (263)
                      |+..+.||+|+||.||++. ..+++.||+|++....   ....+.+..|++++   +.++|+||+++++++.+.+..|+|
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv   80 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV   80 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence            5668899999999999998 4568999999997542   23345566676654   456799999999999999999999


Q ss_pred             EeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc---------------------
Q 039276          107 LECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ---------------------  165 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~---------------------  165 (263)
                      |||+++++|..++...  .+++..+..++.|++.||+|||+.+++||||||+||+.+..                     
T Consensus        81 ~E~~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~  158 (324)
T cd05589          81 MEYAAGGDLMMHIHTD--VFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDRT  158 (324)
T ss_pred             EcCCCCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCCcc
Confidence            9999999999888643  38899999999999999999999999999999999995321                     


Q ss_pred             --ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccc
Q 039276          166 --TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEH  231 (263)
Q Consensus       166 --~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (263)
                        ..|++.|+||            |||||||++|||++|+.||...... ..+...            ...        .
T Consensus       159 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~-~~~~~i------------~~~--------~  217 (324)
T cd05589         159 STFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEE-EVFDSI------------VND--------E  217 (324)
T ss_pred             cccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHH-HHHHHH------------HhC--------C
Confidence              2468889999            9999999999999999998632110 001000            000        0


Q ss_pred             ccchHHHHHHHHHhhccccccCcCCCCCcc
Q 039276          232 FMTKEQCMSFVFNLAMECTVESPNQRINAK  261 (263)
Q Consensus       232 ~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~  261 (263)
                      ...+..+++++.+++.+||+.||++||++.
T Consensus       218 ~~~p~~~~~~~~~li~~~L~~dP~~R~~~~  247 (324)
T cd05589         218 VRYPRFLSREAISIMRRLLRRNPERRLGSG  247 (324)
T ss_pred             CCCCCCCCHHHHHHHHHHhhcCHhHcCCCC
Confidence            012334567789999999999999999754

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=100.00  E-value=1.6e-35  Score=243.39  Aligned_cols=215  Identities=21%  Similarity=0.264  Sum_probs=170.6

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      .+|...+.||+|+||.||++. ..+++.+++|.+..........+.+|+.+++.++|+|++++++.+.+.+..++++||+
T Consensus         9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~   88 (267)
T cd06645           9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC   88 (267)
T ss_pred             HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence            468999999999999999998 4568899999998775555667788999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------cc
Q 039276          111 PHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------TL  167 (263)
Q Consensus       111 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------~~  167 (263)
                      ++++|.+++...+. +++.++..++.|++.||+|||+.+++|+||+|+||+....                       ..
T Consensus        89 ~~~~L~~~~~~~~~-~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~  167 (267)
T cd06645          89 GGGSLQDIYHVTGP-LSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKSFI  167 (267)
T ss_pred             CCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCccccccccc
Confidence            99999999876554 8899999999999999999999999999999999985421                       24


Q ss_pred             ccccccCc---------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccc
Q 039276          168 ATISYMAP---------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHF  232 (263)
Q Consensus       168 g~~~y~aP---------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (263)
                      |+..|+||               |||||||++|+|++|..||.......... ....            ......   ..
T Consensus       168 ~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~-~~~~------------~~~~~~---~~  231 (267)
T cd06645         168 GTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF-LMTK------------SNFQPP---KL  231 (267)
T ss_pred             CcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHH-hhhc------------cCCCCC---cc
Confidence            67789888               99999999999999999985422111100 0000            000000   00


Q ss_pred             cchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          233 MTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       233 ~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .....++..+.+++.+||+.+|++|||+++|
T Consensus       232 ~~~~~~~~~~~~li~~~l~~~P~~R~~~~~l  262 (267)
T cd06645         232 KDKMKWSNSFHHFVKMALTKNPKKRPTAEKL  262 (267)
T ss_pred             cccCCCCHHHHHHHHHHccCCchhCcCHHHH
Confidence            0011345568999999999999999999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.9e-35  Score=238.73  Aligned_cols=216  Identities=22%  Similarity=0.312  Sum_probs=173.6

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      ++|+..+.+|+|++|.||++.. .++..+++|.+........+.+.+|+++++.++|+|++++++.+.+....+++|||+
T Consensus         3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~   82 (262)
T cd06613           3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC   82 (262)
T ss_pred             cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence            4588999999999999999984 457889999998776666788899999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------cc
Q 039276          111 PHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------TL  167 (263)
Q Consensus       111 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------~~  167 (263)
                      ++++|.+++......+++..+..++.|++.||+|||+.+++|+||+|+||+.+..                       ..
T Consensus        83 ~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~  162 (262)
T cd06613          83 GGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKSFI  162 (262)
T ss_pred             CCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhhhhcccccc
Confidence            9999999988764458999999999999999999999999999999999995432                       13


Q ss_pred             ccccccCc---------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccc
Q 039276          168 ATISYMAP---------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHF  232 (263)
Q Consensus       168 g~~~y~aP---------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (263)
                      ++..|+||               |||||||++++|++|+.||.......... ....            ...   .....
T Consensus       163 ~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~-~~~~------------~~~---~~~~~  226 (262)
T cd06613         163 GTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALF-LISK------------SNF---PPPKL  226 (262)
T ss_pred             CCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHh------------ccC---CCccc
Confidence            45568888               99999999999999999986432111100 0000            000   00001


Q ss_pred             cchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          233 MTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       233 ~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ......+.++.+++.+||..+|.+|||+++|
T Consensus       227 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i  257 (262)
T cd06613         227 KDKEKWSPVFHDFIKKCLTKDPKKRPTATKL  257 (262)
T ss_pred             cchhhhhHHHHHHHHHHcCCChhhCCCHHHH
Confidence            1234556779999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=100.00  E-value=1.4e-35  Score=250.19  Aligned_cols=202  Identities=18%  Similarity=0.241  Sum_probs=160.8

Q ss_pred             ceecccCceEEEEEEe-cCCceEEEEEeecC---CCchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCeeEEEEeccCC
Q 039276           38 NLISRGGFGSIYKAKI-QDGMEVVVKGFNLQ---YGGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFKALILECMPH  112 (263)
Q Consensus        38 ~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~---~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~  112 (263)
                      +.||+|+||.||++.. .+++.||+|++...   ..........|..++..+ +|+||+++++++.+.+..|+||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~   80 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG   80 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence            3689999999999994 56889999999754   223445566788888766 799999999999999999999999999


Q ss_pred             CCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------cccc
Q 039276          113 GSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------TLAT  169 (263)
Q Consensus       113 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------~~g~  169 (263)
                      ++|..++..... +++..+..++.|++.||+|||+++++||||||+||+.+..                       ..|+
T Consensus        81 g~L~~~i~~~~~-l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt  159 (320)
T cd05590          81 GDLMFHIQKSRR-FDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCGT  159 (320)
T ss_pred             chHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcccccccC
Confidence            999998876544 8899999999999999999999999999999999995321                       2468


Q ss_pred             ccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHH
Q 039276          170 ISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQ  237 (263)
Q Consensus       170 ~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (263)
                      +.|+||            |||||||++|||++|+.||...... ..+.....    .                ....+..
T Consensus       160 ~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~-~~~~~i~~----~----------------~~~~~~~  218 (320)
T cd05590         160 PDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENED-DLFEAILN----D----------------EVVYPTW  218 (320)
T ss_pred             ccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH-HHHHHHhc----C----------------CCCCCCC
Confidence            899999            9999999999999999998642110 00111100    0                0011234


Q ss_pred             HHHHHHHhhccccccCcCCCCCcc
Q 039276          238 CMSFVFNLAMECTVESPNQRINAK  261 (263)
Q Consensus       238 ~~~~l~~l~~~cl~~~p~~Rpt~~  261 (263)
                      +++++.+++.+||+.||++||++.
T Consensus       219 ~~~~~~~li~~~L~~dP~~R~~~~  242 (320)
T cd05590         219 LSQDAVDILKAFMTKNPTMRLGSL  242 (320)
T ss_pred             CCHHHHHHHHHHcccCHHHCCCCC
Confidence            566799999999999999999983

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=100.00  E-value=1.7e-35  Score=242.43  Aligned_cols=211  Identities=19%  Similarity=0.307  Sum_probs=168.6

Q ss_pred             ccccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccC
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMP  111 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~  111 (263)
                      ++|+..++||+|++|.||+|...++..|++|.+.... ...+.+.+|+.+++.++|+|++++++.+.+.+..++++||++
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   84 (261)
T cd05072           6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMA   84 (261)
T ss_pred             HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCC
Confidence            4589999999999999999997778889999886543 245678899999999999999999999998889999999999


Q ss_pred             CCCHhhhhhhC-CCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc------------------------
Q 039276          112 HGSLGKCLSTS-NYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT------------------------  166 (263)
Q Consensus       112 ~~~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~------------------------  166 (263)
                      +++|.+++... ....++..+..++.|++.||+|||..+++|+||+|+||+.+...                        
T Consensus        85 ~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~  164 (261)
T cd05072          85 KGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGA  164 (261)
T ss_pred             CCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCCceeccCCC
Confidence            99999998753 23478888899999999999999999999999999999954321                        


Q ss_pred             cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccccc
Q 039276          167 LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFM  233 (263)
Q Consensus       167 ~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (263)
                      .++..|+||            |||||||++|+|++ |+.||......  .......            ..      .+.+
T Consensus       165 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~--~~~~~~~------------~~------~~~~  224 (261)
T cd05072         165 KFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS--DVMSALQ------------RG------YRMP  224 (261)
T ss_pred             ccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH--HHHHHHH------------cC------CCCC
Confidence            124568998            99999999999998 99998642111  1111110            00      0111


Q ss_pred             chHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          234 TKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       234 ~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ....++.++.+++.+||..+|++|||+++|
T Consensus       225 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i  254 (261)
T cd05072         225 RMENCPDELYDIMKTCWKEKAEERPTFDYL  254 (261)
T ss_pred             CCCCCCHHHHHHHHHHccCCcccCcCHHHH
Confidence            223456679999999999999999999874

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=100.00  E-value=1.9e-35  Score=249.80  Aligned_cols=206  Identities=16%  Similarity=0.177  Sum_probs=163.9

Q ss_pred             cccccceecccCceEEEEEEe-cCCceEEEEEeecC---CCchHHHHHHHHHHHhhcCC-CcceeEeeEeecCCeeEEEE
Q 039276           33 LFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQ---YGGAFKNLDVECNMMKIIRH-QNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~---~~~~~~~~~~e~~~l~~~~h-~~i~~~~~~~~~~~~~~lv~  107 (263)
                      +|+..+.||+|+||.||+|.. .+++.||+|++...   .......+..|++++..++| ++++++++.+.+.+..|++|
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM   80 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence            378889999999999999984 45789999999754   23345567788999988876 56888899998888999999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc----------------------
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ----------------------  165 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~----------------------  165 (263)
                      ||+++++|.+++..... +++..+..++.|++.||+|||.++++||||||+||+.+..                      
T Consensus        81 E~~~~g~L~~~~~~~~~-~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~  159 (324)
T cd05587          81 EYVNGGDLMYHIQQVGK-FKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTR  159 (324)
T ss_pred             cCCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCcee
Confidence            99999999999876544 7889999999999999999999999999999999985321                      


Q ss_pred             -ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccc
Q 039276          166 -TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHF  232 (263)
Q Consensus       166 -~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (263)
                       ..|++.|+||            |||||||++|||++|+.||...... ..+...            ...        ..
T Consensus       160 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~-~~~~~i------------~~~--------~~  218 (324)
T cd05587         160 TFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED-ELFQSI------------MEH--------NV  218 (324)
T ss_pred             eecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH-HHHHHH------------HcC--------CC
Confidence             2478889999            9999999999999999998642110 001000            000        01


Q ss_pred             cchHHHHHHHHHhhccccccCcCCCCCc
Q 039276          233 MTKEQCMSFVFNLAMECTVESPNQRINA  260 (263)
Q Consensus       233 ~~~~~~~~~l~~l~~~cl~~~p~~Rpt~  260 (263)
                      ..+..+++++.+++.+||..||++|++.
T Consensus       219 ~~~~~~~~~~~~li~~~l~~~P~~R~~~  246 (324)
T cd05587         219 SYPKSLSKEAVSICKGLLTKHPAKRLGC  246 (324)
T ss_pred             CCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence            1233456678999999999999999986

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=100.00  E-value=4.7e-35  Score=243.84  Aligned_cols=219  Identities=19%  Similarity=0.242  Sum_probs=174.3

Q ss_pred             cccccccccccceecccCceEEEEEEe-cCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEE
Q 039276           27 NFSGLFLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKAL  105 (263)
Q Consensus        27 ~~~~~~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l  105 (263)
                      ++...+.|+..+.||+|+||.||++.. .++..+++|.+........+.+.+|+.+++.++|+|++++++.+...+..++
T Consensus         7 ~~~~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   86 (292)
T cd06644           7 DLDPNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWI   86 (292)
T ss_pred             ccCcchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEE
Confidence            334446699999999999999999995 4588999999987766667788899999999999999999999998899999


Q ss_pred             EEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc--------------------
Q 039276          106 ILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ--------------------  165 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~--------------------  165 (263)
                      +|||+++++|..++.+....+++..+..++.|++.+|+|||+.+++|+||+|+||+.+..                    
T Consensus        87 v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~  166 (292)
T cd06644          87 MIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQR  166 (292)
T ss_pred             EEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceeccccccc
Confidence            999999999988876655558999999999999999999999999999999999995421                    


Q ss_pred             ---ccccccccCc-----------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccc
Q 039276          166 ---TLATISYMAP-----------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLL  225 (263)
Q Consensus       166 ---~~g~~~y~aP-----------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (263)
                         ..++..|+||                 |||||||++|||++|+.||..... ......+...               
T Consensus       167 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~-~~~~~~~~~~---------------  230 (292)
T cd06644         167 RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP-MRVLLKIAKS---------------  230 (292)
T ss_pred             cceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccH-HHHHHHHhcC---------------
Confidence               1245678887                 999999999999999999854211 0001111000               


Q ss_pred             ccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          226 SREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       226 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                        .......+..++.++.+++.+||..+|++||++++|
T Consensus       231 --~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i  266 (292)
T cd06644         231 --EPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQL  266 (292)
T ss_pred             --CCccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHH
Confidence              000111233456678999999999999999998764

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=100.00  E-value=3.2e-35  Score=241.58  Aligned_cols=212  Identities=22%  Similarity=0.344  Sum_probs=168.5

Q ss_pred             ccccccceecccCceEEEEEEecC----CceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQD----GMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALI  106 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~----~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv  106 (263)
                      .+|+..+.||+|+||.||+|.+..    ...|++|.+.... ......+..|+.+++.++|+|++++++++.+.+..+++
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv   83 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII   83 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence            458899999999999999998642    4578999887553 23455678899999999999999999999988899999


Q ss_pred             EeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc--------------------
Q 039276          107 LECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT--------------------  166 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~--------------------  166 (263)
                      |||+++++|.+++......+++..+..++.|++.||+|||+++++|+||+|+||+.+...                    
T Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~  163 (266)
T cd05033          84 TEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATY  163 (266)
T ss_pred             EEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhcccccccce
Confidence            999999999999977555689999999999999999999999999999999999954321                    


Q ss_pred             -----cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccc
Q 039276          167 -----LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSRE  228 (263)
Q Consensus       167 -----~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (263)
                           .++..|+||            ||||||+++++|++ |..||......  .+.....            .      
T Consensus       164 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~--~~~~~~~------------~------  223 (266)
T cd05033         164 TTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ--DVIKAVE------------D------  223 (266)
T ss_pred             eccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH--HHHHHHH------------c------
Confidence                 224568898            99999999999998 99998542111  1111110            0      


Q ss_pred             cccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          229 DEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       229 ~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ....+.+..+++.+.+++.+||+.+|++||+++||
T Consensus       224 ~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei  258 (266)
T cd05033         224 GYRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQI  258 (266)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHH
Confidence            00111233456679999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=100.00  E-value=4.2e-35  Score=244.72  Aligned_cols=212  Identities=23%  Similarity=0.319  Sum_probs=170.8

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      .+|+..+.+|+|++|.||++. ..+++.+++|.+..........+.+|+.+++.++|+|++++++.+......++|+||+
T Consensus        20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~   99 (296)
T cd06654          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   99 (296)
T ss_pred             cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence            469999999999999999998 4568999999998776556677889999999999999999999999889999999999


Q ss_pred             CCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------cc
Q 039276          111 PHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------TL  167 (263)
Q Consensus       111 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------~~  167 (263)
                      ++++|.+++...  .+++.++..++.|++.||+|||+.+++|+||+|+||+.+.+                       ..
T Consensus       100 ~~~~L~~~~~~~--~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~  177 (296)
T cd06654         100 AGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV  177 (296)
T ss_pred             CCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhccccccccCccc
Confidence            999999998653  37888999999999999999999999999999999995321                       24


Q ss_pred             ccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccch
Q 039276          168 ATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTK  235 (263)
Q Consensus       168 g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (263)
                      ++..|+||            |||||||++++|++|+.||....... .+.....    ..             ......+
T Consensus       178 ~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~-~~~~~~~----~~-------------~~~~~~~  239 (296)
T cd06654         178 GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR-ALYLIAT----NG-------------TPELQNP  239 (296)
T ss_pred             CCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHH-hHHHHhc----CC-------------CCCCCCc
Confidence            56779999            99999999999999999986421111 0100000    00             0000112


Q ss_pred             HHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          236 EQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       236 ~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ..++..+.+++.+||..+|++|||+.+|
T Consensus       240 ~~~~~~l~~li~~~l~~~p~~Rpt~~ei  267 (296)
T cd06654         240 EKLSAIFRDFLNRCLDMDVEKRGSAKEL  267 (296)
T ss_pred             cccCHHHHHHHHHHCcCCcccCcCHHHH
Confidence            3455668999999999999999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=100.00  E-value=3.8e-35  Score=239.48  Aligned_cols=210  Identities=20%  Similarity=0.253  Sum_probs=169.2

Q ss_pred             ccccceecccCceEEEEEEe-cCCceEEEEEeecC--CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           34 FSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQ--YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      |...+.||+|++|.||++.. .++..+++|.+...  .......+.+|+++++.++|+|++++++.+.+.+..++++||+
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   81 (256)
T cd08529           2 FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYA   81 (256)
T ss_pred             ceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeC
Confidence            77788999999999999994 46899999998754  3345667888999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhhC-CCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------c
Q 039276          111 PHGSLGKCLSTS-NYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------T  166 (263)
Q Consensus       111 ~~~~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------~  166 (263)
                      ++++|.+++... ...+++..++.++.|++.||.|||+.+++|+||+|+||+....                       .
T Consensus        82 ~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~~~  161 (256)
T cd08529          82 ENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTI  161 (256)
T ss_pred             CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCccchhhcc
Confidence            999999999764 3448889999999999999999999999999999999985431                       1


Q ss_pred             cccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccc
Q 039276          167 LATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT  234 (263)
Q Consensus       167 ~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (263)
                      .|++.|+||            |||||||++++|++|+.||......  ..   ..        .... .      ...+.
T Consensus       162 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~---~~--------~~~~-~------~~~~~  221 (256)
T cd08529         162 VGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQG--AL---IL--------KIIR-G------VFPPV  221 (256)
T ss_pred             ccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH--HH---HH--------HHHc-C------CCCCC
Confidence            356779999            9999999999999999998643211  00   00        0000 0      00112


Q ss_pred             hHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          235 KEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       235 ~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +..++.++.+++.+||+.+|++||++.+|
T Consensus       222 ~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l  250 (256)
T cd08529         222 SQMYSQQLAQLIDQCLTKDYRQRPDTFQL  250 (256)
T ss_pred             ccccCHHHHHHHHHHccCCcccCcCHHHH
Confidence            23456679999999999999999999764

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=100.00  E-value=2.7e-35  Score=240.08  Aligned_cols=206  Identities=23%  Similarity=0.408  Sum_probs=162.6

Q ss_pred             ceecccCceEEEEEEe-cCCceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccCCCCH
Q 039276           38 NLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSL  115 (263)
Q Consensus        38 ~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L  115 (263)
                      +.||+|+||.||+|.. .+++.+++|.+.... ......+.+|+++++.++|+|++++++++...+..++++||+++++|
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF   80 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence            3689999999999984 568899999876543 23456688899999999999999999999999999999999999999


Q ss_pred             hhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc-------------------------cccc
Q 039276          116 GKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT-------------------------LATI  170 (263)
Q Consensus       116 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~-------------------------~g~~  170 (263)
                      .+++......+++..++.++.|++.||+|||+++++|+||+|+||+.+...                         .++.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~  160 (252)
T cd05084          81 LTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPV  160 (252)
T ss_pred             HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCCce
Confidence            999976554578899999999999999999999999999999999954321                         0123


Q ss_pred             cccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHH
Q 039276          171 SYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQ  237 (263)
Q Consensus       171 ~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (263)
                      .|+||            |||||||++|||++ |..||......  ...            ......      .+.+.+..
T Consensus       161 ~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~--~~~------------~~~~~~------~~~~~~~~  220 (252)
T cd05084         161 KWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ--QTR------------EAIEQG------VRLPCPEL  220 (252)
T ss_pred             eecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH--HHH------------HHHHcC------CCCCCccc
Confidence            58899            99999999999998 88887532110  010            001000      01112334


Q ss_pred             HHHHHHHhhccccccCcCCCCCccCC
Q 039276          238 CMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       238 ~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ++.++.+++.+||+.+|++|||+++|
T Consensus       221 ~~~~~~~li~~~l~~~p~~Rps~~~~  246 (252)
T cd05084         221 CPDAVYRLMERCWEYDPGQRPSFSTV  246 (252)
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHH
Confidence            56679999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=100.00  E-value=7.7e-35  Score=239.27  Aligned_cols=215  Identities=21%  Similarity=0.283  Sum_probs=168.5

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCC---CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      .+|+..+.||+|+||.||+|. ..++..|++|.+....   ......+.+|+++++.++|+|++++++.+.+.+..++++
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL   81 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence            358899999999999999999 4568999999886532   233456788999999999999999999999888999999


Q ss_pred             eccCCCCHhhhhhh---CCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-------------------
Q 039276          108 ECMPHGSLGKCLST---SNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-------------------  165 (263)
Q Consensus       108 e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-------------------  165 (263)
                      ||+++++|.+++..   ....++...+..++.|++.||+|||+++++|+||+|+||+.+..                   
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~  161 (267)
T cd08228          82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT  161 (267)
T ss_pred             EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchhH
Confidence            99999999988853   22337888899999999999999999999999999999995431                   


Q ss_pred             ----ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccc
Q 039276          166 ----TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSRED  229 (263)
Q Consensus       166 ----~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (263)
                          ..++..|+||            ||||||++++||++|+.||.........+.....   ...         .    
T Consensus       162 ~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~---~~~---------~----  225 (267)
T cd08228         162 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIE---QCD---------Y----  225 (267)
T ss_pred             HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHh---cCC---------C----
Confidence                2456779999            9999999999999999998532111111111100   000         0    


Q ss_pred             ccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          230 EHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       230 ~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                       .......++..+.+++.+||..+|++|||+.+|
T Consensus       226 -~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~v  258 (267)
T cd08228         226 -PPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYV  258 (267)
T ss_pred             -CCCChhhcCHHHHHHHHHHCCCCcccCcCHHHH
Confidence             000123456679999999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=100.00  E-value=2.2e-35  Score=249.88  Aligned_cols=207  Identities=16%  Similarity=0.218  Sum_probs=161.7

Q ss_pred             ceecccCceEEEEEE-ecCCceEEEEEeecC---CCchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCeeEEEEeccCC
Q 039276           38 NLISRGGFGSIYKAK-IQDGMEVVVKGFNLQ---YGGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFKALILECMPH  112 (263)
Q Consensus        38 ~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~---~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~  112 (263)
                      +.||+|+||.||++. ..+++.+|+|++...   .......+..|+.++..+ +|+||+++++++.+.+..+++|||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~   80 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   80 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence            468999999999999 456889999999864   223445677788888776 899999999999999999999999999


Q ss_pred             CCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------cccc
Q 039276          113 GSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------TLAT  169 (263)
Q Consensus       113 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------~~g~  169 (263)
                      ++|..++..... +++..+..++.|++.||+|||+++++||||||+||+.+..                       ..|+
T Consensus        81 ~~L~~~~~~~~~-l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt  159 (329)
T cd05618          81 GDLMFHMQRQRK-LPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGT  159 (329)
T ss_pred             CCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccccccCC
Confidence            999988876544 8999999999999999999999999999999999995321                       2468


Q ss_pred             ccccCc------------chhhHHHHHHHHHhCCCCCccccCCCc---hhhhHhhhcCCCchhhhhhhcccccccccccc
Q 039276          170 ISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEM---TLKHWVNDLLPNSVMKVVSANLLSREDEHFMT  234 (263)
Q Consensus       170 ~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (263)
                      +.|+||            |||||||++|||++|+.||........   ....+..        ..+    ..   .....
T Consensus       160 ~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~--------~~i----~~---~~~~~  224 (329)
T cd05618         160 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLF--------QVI----LE---KQIRI  224 (329)
T ss_pred             ccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHH--------HHH----hc---CCCCC
Confidence            889999            999999999999999999964221111   0001100        000    00   00112


Q ss_pred             hHHHHHHHHHhhccccccCcCCCCCc
Q 039276          235 KEQCMSFVFNLAMECTVESPNQRINA  260 (263)
Q Consensus       235 ~~~~~~~l~~l~~~cl~~~p~~Rpt~  260 (263)
                      +..++.++.+++.+||+.||++|||+
T Consensus       225 p~~~~~~~~~ll~~~L~~dP~~R~~~  250 (329)
T cd05618         225 PRSLSVKAASVLKSFLNKDPKERLGC  250 (329)
T ss_pred             CCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence            34556778999999999999999985

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3e-35  Score=243.45  Aligned_cols=215  Identities=20%  Similarity=0.276  Sum_probs=173.8

Q ss_pred             cccccccceecccCceEEEEEEe-cCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           31 LFLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      .++|+..+.||+|++|.||++.. .++..+++|.+........+.+..|+++++.++|+|++++++.+.+....+++|||
T Consensus         4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (280)
T cd06611           4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF   83 (280)
T ss_pred             hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence            45699999999999999999995 46889999999877655667788999999999999999999999999999999999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------c
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------T  166 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------~  166 (263)
                      +++++|.+++......+++..+..++.|++.||+|||+.+++|+||+|+||+.+..                       .
T Consensus        84 ~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~  163 (280)
T cd06611          84 CDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDTF  163 (280)
T ss_pred             cCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhccccccccee
Confidence            99999999987755558999999999999999999999999999999999995421                       1


Q ss_pred             cccccccCc-----------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccc
Q 039276          167 LATISYMAP-----------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSRED  229 (263)
Q Consensus       167 ~g~~~y~aP-----------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (263)
                      .++..|+||                 |||||||++|+|++|+.||...... ..+..+..                 ...
T Consensus       164 ~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~-----------------~~~  225 (280)
T cd06611         164 IGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPM-RVLLKILK-----------------SEP  225 (280)
T ss_pred             ecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHH-HHHHHHhc-----------------CCC
Confidence            356678887                 9999999999999999998642111 11111100                 000


Q ss_pred             ccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          230 EHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       230 ~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .....+..++.++.+++.+||+.+|++||++.+|
T Consensus       226 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~i  259 (280)
T cd06611         226 PTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAEL  259 (280)
T ss_pred             CCcCCcccCCHHHHHHHHHHhccChhhCcCHHHH
Confidence            0111233456679999999999999999999764

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=4.8e-36  Score=239.20  Aligned_cols=221  Identities=22%  Similarity=0.296  Sum_probs=177.7

Q ss_pred             cceecccCceEEEEEE-ecCCceEEEEEeecCCCchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCeeEEEEeccCCCC
Q 039276           37 SNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFKALILECMPHGS  114 (263)
Q Consensus        37 ~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~  114 (263)
                      .+.||+|+++.|..+. +.++..+|||++.+.....+++..+|++++.+. .|+||+++++||++....|+|||-+.||.
T Consensus        83 ~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGp  162 (463)
T KOG0607|consen   83 SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGP  162 (463)
T ss_pred             HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCch
Confidence            5689999999999998 888999999999999878899999999999999 69999999999999999999999999999


Q ss_pred             HhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccc-------------------------------
Q 039276          115 LGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQ-------------------------------  163 (263)
Q Consensus       115 L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~-------------------------------  163 (263)
                      |-..+.+... +++..+.++..+|+.||.|||++||.|||+||+|||..                               
T Consensus       163 lLshI~~~~~-F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP  241 (463)
T KOG0607|consen  163 LLSHIQKRKH-FNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTP  241 (463)
T ss_pred             HHHHHHHhhh-ccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCc
Confidence            9999987665 89999999999999999999999999999999999921                               


Q ss_pred             --ccccccccccCc-----------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCch-hhhhhhc
Q 039276          164 --IQTLATISYMAP-----------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSV-MKVVSAN  223 (263)
Q Consensus       164 --~~~~g~~~y~aP-----------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  223 (263)
                        .+.+|+..||||                 |.||||||||-|++|..||..+...+=.+.   .....+.- .++....
T Consensus       242 ~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWd---rGe~Cr~CQ~~LFesI  318 (463)
T KOG0607|consen  242 ELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWD---RGEVCRVCQNKLFESI  318 (463)
T ss_pred             cccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCcc---CCCccHHHHHHHHHHH
Confidence              134688899999                 999999999999999999987644322221   10000000 0011110


Q ss_pred             cccccccccc--chHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          224 LLSREDEHFM--TKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       224 ~~~~~~~~~~--~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                        .+....+|  ....++++..+++..++..++.+|.++.++
T Consensus       319 --QEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~v  358 (463)
T KOG0607|consen  319 --QEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQV  358 (463)
T ss_pred             --hccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhc
Confidence              01111111  125678899999999999999999988654

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=100.00  E-value=2.4e-35  Score=248.40  Aligned_cols=202  Identities=16%  Similarity=0.233  Sum_probs=158.3

Q ss_pred             ceecccCceEEEEEEe-cCCceEEEEEeecCC---CchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCeeEEEEeccCC
Q 039276           38 NLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY---GGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFKALILECMPH  112 (263)
Q Consensus        38 ~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~  112 (263)
                      +.||+|+||.||+|.. .++..||+|++....   ....+....|..++... +|+||+++++.+...+..+++|||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g   80 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            3689999999999994 558889999997542   22344455566666544 899999999999999999999999999


Q ss_pred             CCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------cccc
Q 039276          113 GSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------TLAT  169 (263)
Q Consensus       113 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------~~g~  169 (263)
                      ++|..++..... +++..+..++.|++.||+|||+++++||||||+||+.+..                       ..||
T Consensus        81 g~L~~~~~~~~~-~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt  159 (316)
T cd05592          81 GDLMFHIQSSGR-FDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCGT  159 (316)
T ss_pred             CcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccccccCC
Confidence            999999876554 8899999999999999999999999999999999984321                       2478


Q ss_pred             ccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHH
Q 039276          170 ISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQ  237 (263)
Q Consensus       170 ~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (263)
                      +.|+||            |||||||++|||++|+.||..... ...+...            ..        .....+..
T Consensus       160 ~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~-~~~~~~i------------~~--------~~~~~~~~  218 (316)
T cd05592         160 PDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDE-DELFDSI------------LN--------DRPHFPRW  218 (316)
T ss_pred             ccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCH-HHHHHHH------------Hc--------CCCCCCCC
Confidence            899999            999999999999999999864211 0000000            00        00112334


Q ss_pred             HHHHHHHhhccccccCcCCCCCcc
Q 039276          238 CMSFVFNLAMECTVESPNQRINAK  261 (263)
Q Consensus       238 ~~~~l~~l~~~cl~~~p~~Rpt~~  261 (263)
                      ++.++.+++.+||+.+|++||++.
T Consensus       219 ~~~~~~~ll~~~l~~~P~~R~~~~  242 (316)
T cd05592         219 ISKEAKDCLSKLFERDPTKRLGVD  242 (316)
T ss_pred             CCHHHHHHHHHHccCCHHHcCCCh
Confidence            566789999999999999999874

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=100.00  E-value=1.7e-35  Score=249.50  Aligned_cols=201  Identities=17%  Similarity=0.212  Sum_probs=161.0

Q ss_pred             ceecccCceEEEEEEe-cCCceEEEEEeecC---CCchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCeeEEEEeccCC
Q 039276           38 NLISRGGFGSIYKAKI-QDGMEVVVKGFNLQ---YGGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFKALILECMPH  112 (263)
Q Consensus        38 ~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~---~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~  112 (263)
                      +.||+|+||.||++.. .++..||+|.+...   .......+..|+++++.+ +|+||+++++++.+.+..+++|||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   80 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG   80 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            3689999999999984 45889999999754   223455667788888877 799999999999999999999999999


Q ss_pred             CCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------cccc
Q 039276          113 GSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------TLAT  169 (263)
Q Consensus       113 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------~~g~  169 (263)
                      ++|..++..... +++..+..++.|++.||+|||+++++|+||||+||+.+..                       ..|+
T Consensus        81 ~~L~~~~~~~~~-l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~  159 (318)
T cd05570          81 GDLMFHIQRSGR-FDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCGT  159 (318)
T ss_pred             CCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccceecC
Confidence            999998876544 8999999999999999999999999999999999995321                       2368


Q ss_pred             ccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHH
Q 039276          170 ISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQ  237 (263)
Q Consensus       170 ~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (263)
                      +.|+||            |||||||++|+|++|+.||.....  ......           +...        ....+..
T Consensus       160 ~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~--~~~~~~-----------i~~~--------~~~~~~~  218 (318)
T cd05570         160 PDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDE--DELFQS-----------ILED--------EVRYPRW  218 (318)
T ss_pred             ccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCH--HHHHHH-----------HHcC--------CCCCCCc
Confidence            889999            999999999999999999863211  111000           0000        0012234


Q ss_pred             HHHHHHHhhccccccCcCCCCCc
Q 039276          238 CMSFVFNLAMECTVESPNQRINA  260 (263)
Q Consensus       238 ~~~~l~~l~~~cl~~~p~~Rpt~  260 (263)
                      +++++.+++.+||+.||++|||+
T Consensus       219 ~~~~~~~li~~~l~~dP~~R~s~  241 (318)
T cd05570         219 LSKEAKSILKSFLTKNPEKRLGC  241 (318)
T ss_pred             CCHHHHHHHHHHccCCHHHcCCC
Confidence            56679999999999999999998

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>PHA03212 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=4e-35  Score=253.41  Aligned_cols=224  Identities=17%  Similarity=0.149  Sum_probs=165.9

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      .+|+..+.||+|+||.||++. ..+++.||+|...      ...+.+|+++++.++||||+++++++......++++|++
T Consensus        92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~  165 (391)
T PHA03212         92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRY  165 (391)
T ss_pred             CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecC
Confidence            469999999999999999999 4568899999643      234678999999999999999999999888999999999


Q ss_pred             CCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc------------------------cc
Q 039276          111 PHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI------------------------QT  166 (263)
Q Consensus       111 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~------------------------~~  166 (263)
                      . ++|..++..... +++..++.++.|++.||+|||+++|+||||||+||+++.                        ..
T Consensus       166 ~-~~L~~~l~~~~~-l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~~  243 (391)
T PHA03212        166 K-TDLYCYLAAKRN-IAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYGW  243 (391)
T ss_pred             C-CCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCcccccccccccccccc
Confidence            5 589888876543 888999999999999999999999999999999998432                        12


Q ss_pred             cccccccCc------------chhhHHHHHHHHHhCCCCCccccCC------CchhhhHhhhcCC------Cchhhhhhh
Q 039276          167 LATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHG------EMTLKHWVNDLLP------NSVMKVVSA  222 (263)
Q Consensus       167 ~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~------~~~~~~~~~~~~~------~~~~~~~~~  222 (263)
                      .||+.|+||            |||||||++|||++|+.||......      ...+.........      .........
T Consensus       244 ~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~  323 (391)
T PHA03212        244 AGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDE  323 (391)
T ss_pred             cCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHH
Confidence            478899999            9999999999999999887532111      1111111111110      000000000


Q ss_pred             c-------cccccccccc--chHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          223 N-------LLSREDEHFM--TKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       223 ~-------~~~~~~~~~~--~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .       .......+..  ....++.++.+++.+||+.||++|||++|+
T Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~el  373 (391)
T PHA03212        324 IYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEAL  373 (391)
T ss_pred             HHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHH
Confidence            0       0000000100  112456789999999999999999999874

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=100.00  E-value=3.1e-35  Score=247.66  Aligned_cols=202  Identities=17%  Similarity=0.271  Sum_probs=159.2

Q ss_pred             ceecccCceEEEEEEe-cCCceEEEEEeecCC---CchHHHHHHHHHHHhh-cCCCcceeEeeEeecCCeeEEEEeccCC
Q 039276           38 NLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY---GGAFKNLDVECNMMKI-IRHQNLIKIISSCSKDDFKALILECMPH  112 (263)
Q Consensus        38 ~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~-~~h~~i~~~~~~~~~~~~~~lv~e~~~~  112 (263)
                      +.||+|+||.||+|.. .+++.||+|.+....   .........|..++.. ++||||+++++++.+.+..+++|||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~   80 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence            3689999999999994 457899999997642   2334455667777765 4899999999999999999999999999


Q ss_pred             CCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------cccc
Q 039276          113 GSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------TLAT  169 (263)
Q Consensus       113 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------~~g~  169 (263)
                      |+|..++..... +++..+..++.|++.||+|||+++++||||||+||+.+..                       ..|+
T Consensus        81 g~L~~~l~~~~~-~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt  159 (316)
T cd05619          81 GDLMFHIQSCHK-FDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCGT  159 (316)
T ss_pred             CcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeecCC
Confidence            999999976543 7888999999999999999999999999999999995321                       2368


Q ss_pred             ccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHH
Q 039276          170 ISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQ  237 (263)
Q Consensus       170 ~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (263)
                      ..|+||            |||||||++|||++|+.||.....  ..+...            +...       ....+..
T Consensus       160 ~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~--~~~~~~------------i~~~-------~~~~~~~  218 (316)
T cd05619         160 PDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDE--EELFQS------------IRMD-------NPCYPRW  218 (316)
T ss_pred             ccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCH--HHHHHH------------HHhC-------CCCCCcc
Confidence            889999            999999999999999999864211  000000            0000       0011234


Q ss_pred             HHHHHHHhhccccccCcCCCCCcc
Q 039276          238 CMSFVFNLAMECTVESPNQRINAK  261 (263)
Q Consensus       238 ~~~~l~~l~~~cl~~~p~~Rpt~~  261 (263)
                      ++.++.+++.+||+.||++||++.
T Consensus       219 ~~~~~~~li~~~l~~~P~~R~~~~  242 (316)
T cd05619         219 LTREAKDILVKLFVREPERRLGVK  242 (316)
T ss_pred             CCHHHHHHHHHHhccCHhhcCCCh
Confidence            566789999999999999999986

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=100.00  E-value=3e-35  Score=244.59  Aligned_cols=211  Identities=26%  Similarity=0.447  Sum_probs=166.9

Q ss_pred             cccccceecccCceEEEEEEe------cCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEE
Q 039276           33 LFSESNLISRGGFGSIYKAKI------QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALI  106 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~------~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv  106 (263)
                      .|...+.+|+|+||.||++..      .++..+++|.+........+.+.+|+++++.++|+|++++++++...+..+++
T Consensus         6 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   85 (288)
T cd05093           6 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMV   85 (288)
T ss_pred             HeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence            488899999999999999973      22456889988766555567788999999999999999999999999999999


Q ss_pred             EeccCCCCHhhhhhhCC------------CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc--------
Q 039276          107 LECMPHGSLGKCLSTSN------------YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT--------  166 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~~~------------~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~--------  166 (263)
                      +||+++++|.+++....            ..+++..++.++.|++.||+|||+++++||||||+||+.+...        
T Consensus        86 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg  165 (288)
T cd05093          86 FEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFG  165 (288)
T ss_pred             EEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEeccCC
Confidence            99999999999987432            2378899999999999999999999999999999999854321        


Q ss_pred             -----------------cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCch
Q 039276          167 -----------------LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSV  216 (263)
Q Consensus       167 -----------------~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~  216 (263)
                                       .++..|+||            |||||||++++|++ |..||...... .........      
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~-~~~~~i~~~------  238 (288)
T cd05093         166 MSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN-EVIECITQG------  238 (288)
T ss_pred             ccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHcC------
Confidence                             124579999            99999999999998 99998643211 111111110      


Q ss_pred             hhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          217 MKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                            ..       ...+..++.++.+++.+||+.+|.+|||+.+|
T Consensus       239 ------~~-------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v  272 (288)
T cd05093         239 ------RV-------LQRPRTCPKEVYDLMLGCWQREPHMRLNIKEI  272 (288)
T ss_pred             ------Cc-------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHH
Confidence                  00       01122345679999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=100.00  E-value=8e-35  Score=243.51  Aligned_cols=231  Identities=17%  Similarity=0.199  Sum_probs=170.8

Q ss_pred             cccccccceecccCceEEEEEEe-cCCceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEe
Q 039276           31 LFLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      .++|...+.||.|+||.||+|.. .++..|++|.+.... ......+.+|+++++.++|+||+++++++.+.+..++++|
T Consensus         5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e   84 (301)
T cd07873           5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE   84 (301)
T ss_pred             ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEe
Confidence            35699999999999999999984 468899999987553 2334567789999999999999999999999999999999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------  165 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------  165 (263)
                      |+++ +|.+++......+++..+..++.|++.||+|||+.+++|+||+|+||+.+..                       
T Consensus        85 ~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~  163 (301)
T cd07873          85 YLDK-DLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSN  163 (301)
T ss_pred             cccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCcccc
Confidence            9975 9999887655558889999999999999999999999999999999995432                       


Q ss_pred             ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhc---CCCchhhhhhhccccc--
Q 039276          166 TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDL---LPNSVMKVVSANLLSR--  227 (263)
Q Consensus       166 ~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~--  227 (263)
                      ..++..|+||             |||||||++|||++|+.||...... ..+.......   .........+......  
T Consensus       164 ~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (301)
T cd07873         164 EVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVE-EQLHFIFRILGTPTEETWPGILSNEEFKSYN  242 (301)
T ss_pred             cceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHcCCCChhhchhhhccccccccc
Confidence            1346778998             9999999999999999998643211 1111111100   0000000000000000  


Q ss_pred             ccc-c----ccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          228 EDE-H----FMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       228 ~~~-~----~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .+. .    ......+++++.+++.+||+.||.+|||++|+
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~ei  283 (301)
T cd07873         243 YPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEA  283 (301)
T ss_pred             cCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHH
Confidence            000 0    00123456778999999999999999999874

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=100.00  E-value=3.8e-35  Score=253.90  Aligned_cols=214  Identities=21%  Similarity=0.314  Sum_probs=166.3

Q ss_pred             cccccccceecccCceEEEEEEec------CCceEEEEEeecCC-CchHHHHHHHHHHHhhcC-CCcceeEeeEeecCCe
Q 039276           31 LFLFSESNLISRGGFGSIYKAKIQ------DGMEVVVKGFNLQY-GGAFKNLDVECNMMKIIR-HQNLIKIISSCSKDDF  102 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~~------~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~  102 (263)
                      .++|...+.||+|+||.||+|...      .+..||+|++.... ....+.+.+|+++++.+. ||||+++++++.+.+.
T Consensus        36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~  115 (400)
T cd05105          36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGP  115 (400)
T ss_pred             ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCc
Confidence            467999999999999999999742      13469999997543 234567889999999996 9999999999999999


Q ss_pred             eEEEEeccCCCCHhhhhhhCC-----------------------------------------------------------
Q 039276          103 KALILECMPHGSLGKCLSTSN-----------------------------------------------------------  123 (263)
Q Consensus       103 ~~lv~e~~~~~~L~~~l~~~~-----------------------------------------------------------  123 (263)
                      .+++|||+++|+|.+++....                                                           
T Consensus       116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (400)
T cd05105         116 IYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIK  195 (400)
T ss_pred             eEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhh
Confidence            999999999999998876421                                                           


Q ss_pred             ------------------------------------CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc--
Q 039276          124 ------------------------------------YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ--  165 (263)
Q Consensus       124 ------------------------------------~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~--  165 (263)
                                                          ..+++..+..++.|++.||+|||+.+++|+||||+||+.+..  
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~~  275 (400)
T cd05105         196 EASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKI  275 (400)
T ss_pred             hhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCCCE
Confidence                                                125667788999999999999999999999999999985421  


Q ss_pred             -----------------------ccccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhh
Q 039276          166 -----------------------TLATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVN  209 (263)
Q Consensus       166 -----------------------~~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~  209 (263)
                                             ..++..|+||            |||||||++|||++ |..||.............  
T Consensus       276 ~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~--  353 (400)
T cd05105         276 VKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKI--  353 (400)
T ss_pred             EEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHH--
Confidence                                   1244669999            99999999999997 999986432111111100  


Q ss_pred             hcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          210 DLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                                 ..      ..+.+.+..++.++.+++.+||+.+|++|||+.+|
T Consensus       354 -----------~~------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l  390 (400)
T cd05105         354 -----------KS------GYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHL  390 (400)
T ss_pred             -----------hc------CCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHH
Confidence                       00      01112234567779999999999999999998764

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=100.00  E-value=2.5e-35  Score=249.94  Aligned_cols=210  Identities=18%  Similarity=0.193  Sum_probs=165.3

Q ss_pred             ccccceecccCceEEEEEEe----cCCceEEEEEeecC----CCchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCeeE
Q 039276           34 FSESNLISRGGFGSIYKAKI----QDGMEVVVKGFNLQ----YGGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFKA  104 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~----~~~~~v~vK~~~~~----~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~  104 (263)
                      |+..+.||+|+||.||+++.    .+++.||+|++...    .....+.+..|+.+++.+ +|++|+++++++.+.+..+
T Consensus         2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~   81 (332)
T cd05614           2 FELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLH   81 (332)
T ss_pred             ceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEE
Confidence            78899999999999999874    25789999999753    123345677899999999 5999999999999999999


Q ss_pred             EEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-------------------
Q 039276          105 LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-------------------  165 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-------------------  165 (263)
                      ++|||+++++|.+++..... +++..+..++.|++.||+|||+++++||||||+||+.+..                   
T Consensus        82 lv~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~  160 (332)
T cd05614          82 LILDYVSGGEMFTHLYQRDN-FSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEK  160 (332)
T ss_pred             EEEeCCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccCC
Confidence            99999999999999876544 8899999999999999999999999999999999995321                   


Q ss_pred             -----ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccc
Q 039276          166 -----TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSR  227 (263)
Q Consensus       166 -----~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (263)
                           ..||+.|+||             |||||||++|||++|+.||........ ......             .....
T Consensus       161 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-~~~~~~-------------~~~~~  226 (332)
T cd05614         161 ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNT-QSEVSR-------------RILKC  226 (332)
T ss_pred             CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCC-HHHHHH-------------HHhcC
Confidence                 2478889999             999999999999999999863211111 111100             00000


Q ss_pred             ccccccchHHHHHHHHHhhccccccCcCCCCCcc
Q 039276          228 EDEHFMTKEQCMSFVFNLAMECTVESPNQRINAK  261 (263)
Q Consensus       228 ~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~  261 (263)
                         ..+.+..+++++.+++.+||+.||++||++.
T Consensus       227 ---~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~  257 (332)
T cd05614         227 ---DPPFPSFIGPEAQDLLHKLLRKDPKKRLGAG  257 (332)
T ss_pred             ---CCCCCCCCCHHHHHHHHHHcCCCHHHcCCCC
Confidence               0112334567799999999999999999643

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=100.00  E-value=4.2e-36  Score=243.47  Aligned_cols=225  Identities=21%  Similarity=0.260  Sum_probs=173.3

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecC--C---eeEE
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKD--D---FKAL  105 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~--~---~~~l  105 (263)
                      -.|...+++|+|+||.||.|. .+++..||||+.-.+..    .-..|++++++++|||||++.-+|...  +   ...+
T Consensus        24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnl   99 (364)
T KOG0658|consen   24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNL   99 (364)
T ss_pred             EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHH
Confidence            358889999999999999999 55679999999865532    223599999999999999998888543  2   3458


Q ss_pred             EEeccCCCCHhhhhhh---CCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc------------------
Q 039276          106 ILECMPHGSLGKCLST---SNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI------------------  164 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~------------------  164 (263)
                      ||||+|. ||..+++.   .+..++...++-+.+|++.||+|||..+|+||||||+|+|.+.                  
T Consensus       100 VleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~  178 (364)
T KOG0658|consen  100 VLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVK  178 (364)
T ss_pred             HHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceeecc
Confidence            9999998 99998874   2344788888889999999999999999999999999999443                  


Q ss_pred             -----cccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccc
Q 039276          165 -----QTLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLS  226 (263)
Q Consensus       165 -----~~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (263)
                           ...+|..|+||             ||||.||++.||+.|++-|.. ..+...+.............++-.....-
T Consensus       179 ~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG-~s~~dQL~eIik~lG~Pt~e~I~~mn~~y  257 (364)
T KOG0658|consen  179 GEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPG-DSSVDQLVEIIKVLGTPTREDIKSMNPNY  257 (364)
T ss_pred             CCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCC-CCHHHHHHHHHHHhCCCCHHHHhhcCccc
Confidence                 33678899999             999999999999999999875 33334455555555554444443333221


Q ss_pred             c---------ccccccchHHHHHHHHHhhccccccCcCCCCCccC
Q 039276          227 R---------EDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKE  262 (263)
Q Consensus       227 ~---------~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~e  262 (263)
                      .         .++........++++.+|+.++|+.+|.+|.++.|
T Consensus       258 ~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~  302 (364)
T KOG0658|consen  258 TEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALE  302 (364)
T ss_pred             ccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHH
Confidence            1         11111234567788999999999999999998765

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=100.00  E-value=3.6e-35  Score=239.99  Aligned_cols=211  Identities=23%  Similarity=0.327  Sum_probs=168.2

Q ss_pred             ccccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccC
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMP  111 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~  111 (263)
                      .+|+..+.||+|++|.||++.+.++..+++|.+.... .....+.+|+++++.++|+|++++++++...+..++++||++
T Consensus         4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~   82 (256)
T cd05059           4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMA   82 (256)
T ss_pred             HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCC
Confidence            3488899999999999999997767789999886442 234567789999999999999999999998889999999999


Q ss_pred             CCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc------------------------c
Q 039276          112 HGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT------------------------L  167 (263)
Q Consensus       112 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~------------------------~  167 (263)
                      +++|.+++......+++..+..++.|++.||+|||+.+++|+||+|+||+.+.+.                        .
T Consensus        83 ~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~~~  162 (256)
T cd05059          83 NGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTK  162 (256)
T ss_pred             CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceecccccccccCCCC
Confidence            9999999976554588999999999999999999999999999999999854321                        1


Q ss_pred             ccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccc
Q 039276          168 ATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT  234 (263)
Q Consensus       168 g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (263)
                      ++..|+||            ||||||+++|||++ |+.||......+ .....             ...      .+.+.
T Consensus       163 ~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-~~~~~-------------~~~------~~~~~  222 (256)
T cd05059         163 FPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE-VVESV-------------SAG------YRLYR  222 (256)
T ss_pred             CCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHH-HHHHH-------------HcC------CcCCC
Confidence            12358999            99999999999999 899986432111 01000             000      01112


Q ss_pred             hHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          235 KEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       235 ~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +..++.++.+++.+||..+|++|||+.||
T Consensus       223 ~~~~~~~~~~li~~cl~~~p~~Rpt~~~~  251 (256)
T cd05059         223 PKLAPTEVYTIMYSCWHEKPEDRPAFKKL  251 (256)
T ss_pred             CCCCCHHHHHHHHHHhcCChhhCcCHHHH
Confidence            33467779999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=100.00  E-value=5.1e-35  Score=242.41  Aligned_cols=212  Identities=18%  Similarity=0.273  Sum_probs=169.0

Q ss_pred             ccccceecccCceEEEEEEec-CCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccCC
Q 039276           34 FSESNLISRGGFGSIYKAKIQ-DGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPH  112 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~~-~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~  112 (263)
                      |+..+.||+|+||.||++... ++..+++|.+........+.+.+|+++++.++|+|++++++.+...+..++++||+++
T Consensus         7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~   86 (282)
T cd06643           7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG   86 (282)
T ss_pred             HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence            678889999999999999954 5778899998766555667788899999999999999999999999999999999999


Q ss_pred             CCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------cccc
Q 039276          113 GSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------TLAT  169 (263)
Q Consensus       113 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------~~g~  169 (263)
                      ++|..++......+++..+..++.|++.||+|||+.+++|+||+|+||+.+.+                       ..++
T Consensus        87 ~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~  166 (282)
T cd06643          87 GAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGT  166 (282)
T ss_pred             CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEcccccccccccccccccccccc
Confidence            99998876544558999999999999999999999999999999999984321                       2356


Q ss_pred             ccccCc-----------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccc
Q 039276          170 ISYMAP-----------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHF  232 (263)
Q Consensus       170 ~~y~aP-----------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (263)
                      ..|+||                 |||||||+++||++|+.||......+. .......                 .....
T Consensus       167 ~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~-~~~~~~~-----------------~~~~~  228 (282)
T cd06643         167 PYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRV-LLKIAKS-----------------EPPTL  228 (282)
T ss_pred             ccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHH-HHHHhhc-----------------CCCCC
Confidence            778888                 999999999999999999864311110 0000000                 00001


Q ss_pred             cchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          233 MTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       233 ~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ..+..++.++.+++.+||+.+|.+|||+.+|
T Consensus       229 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i  259 (282)
T cd06643         229 AQPSRWSSEFKDFLKKCLEKNVDARWTTTQL  259 (282)
T ss_pred             CCccccCHHHHHHHHHHccCChhhCcCHHHH
Confidence            1233456679999999999999999999764

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=100.00  E-value=3.9e-35  Score=248.23  Aligned_cols=208  Identities=15%  Similarity=0.198  Sum_probs=162.6

Q ss_pred             ceecccCceEEEEEE-ecCCceEEEEEeecCC---CchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCeeEEEEeccCC
Q 039276           38 NLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY---GGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFKALILECMPH  112 (263)
Q Consensus        38 ~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~  112 (263)
                      +.||+|+||.||++. ..+++.+|+|++....   ....+.+..|+.++.++ +|++|+++++.+.+.+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG   80 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence            468999999999998 4568899999998642   23455677888888888 699999999999999999999999999


Q ss_pred             CCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------cccc
Q 039276          113 GSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------TLAT  169 (263)
Q Consensus       113 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------~~g~  169 (263)
                      ++|..++..... +++..+..++.|++.||+|||+++++||||||+||+.+..                       ..|+
T Consensus        81 ~~L~~~~~~~~~-l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt  159 (327)
T cd05617          81 GDLMFHMQRQRK-LPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCGT  159 (327)
T ss_pred             CcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceecccCC
Confidence            999998876544 8999999999999999999999999999999999994321                       2478


Q ss_pred             ccccCc------------chhhHHHHHHHHHhCCCCCccccCCCc-hhhhHhhhcCCCchhhhhhhcccccccccccchH
Q 039276          170 ISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEM-TLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKE  236 (263)
Q Consensus       170 ~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (263)
                      +.|+||            |||||||++|||++|+.||........ .....            ........   ....+.
T Consensus       160 ~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~------------~~~~~~~~---~~~~p~  224 (327)
T cd05617         160 PNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDY------------LFQVILEK---PIRIPR  224 (327)
T ss_pred             cccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHH------------HHHHHHhC---CCCCCC
Confidence            889999            999999999999999999964321110 00000            00000000   011233


Q ss_pred             HHHHHHHHhhccccccCcCCCCCcc
Q 039276          237 QCMSFVFNLAMECTVESPNQRINAK  261 (263)
Q Consensus       237 ~~~~~l~~l~~~cl~~~p~~Rpt~~  261 (263)
                      .++..+.+++.+||+.||++|+++.
T Consensus       225 ~~~~~~~~li~~~L~~dP~~R~~~~  249 (327)
T cd05617         225 FLSVKASHVLKGFLNKDPKERLGCQ  249 (327)
T ss_pred             CCCHHHHHHHHHHhccCHHHcCCCC
Confidence            4566789999999999999999864

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=100.00  E-value=2.2e-35  Score=236.47  Aligned_cols=231  Identities=20%  Similarity=0.178  Sum_probs=172.5

Q ss_pred             ccccccccceecccCceEEEEEE-ecCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecC--CeeE
Q 039276           30 GLFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKD--DFKA  104 (263)
Q Consensus        30 ~~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~--~~~~  104 (263)
                      +.+.|++.+.|++|+||.||+|+ ..++.-||+|+++.+.  .+..-...+||.++.+++|+|||.+..+...+  +..|
T Consensus        74 sv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy  153 (419)
T KOG0663|consen   74 SVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIY  153 (419)
T ss_pred             cHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceee
Confidence            34569999999999999999999 5668899999998764  33445567899999999999999998887543  4699


Q ss_pred             EEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc--------------------
Q 039276          105 LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI--------------------  164 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~--------------------  164 (263)
                      +|||||+. +|..++..-+..+...+.+.++.|++.|++|||++.|+|||||++|+|++.                    
T Consensus       154 ~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k  232 (419)
T KOG0663|consen  154 IVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLK  232 (419)
T ss_pred             eeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCCcc
Confidence            99999987 999999876666899999999999999999999999999999999999543                    


Q ss_pred             ---cccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCc--hhhhhhh----
Q 039276          165 ---QTLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNS--VMKVVSA----  222 (263)
Q Consensus       165 ---~~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~----  222 (263)
                         ..+.|..|+||             |+||+|||+.||+++++-|.....- +.+...........  +..-++.    
T Consensus       233 ~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~-dQl~~If~llGtPte~iwpg~~~lp~~  311 (419)
T KOG0663|consen  233 PYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEI-DQLDKIFKLLGTPSEAIWPGYSELPAV  311 (419)
T ss_pred             cCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchH-HHHHHHHHHhCCCccccCCCccccchh
Confidence               23568889999             9999999999999999988643211 11111111111110  0000000    


Q ss_pred             --cc---cccccccccch-HHHHHHHHHhhccccccCcCCCCCccC
Q 039276          223 --NL---LSREDEHFMTK-EQCMSFVFNLAMECTVESPNQRINAKE  262 (263)
Q Consensus       223 --~~---~~~~~~~~~~~-~~~~~~l~~l~~~cl~~~p~~Rpt~~e  262 (263)
                        .-   .+-...+..+. ...++...+|+..+|..||.+|.|++|
T Consensus       312 k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~  357 (419)
T KOG0663|consen  312 KKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAED  357 (419)
T ss_pred             hccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHH
Confidence              00   00000111111 125688999999999999999999975

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-35  Score=271.26  Aligned_cols=212  Identities=24%  Similarity=0.392  Sum_probs=176.9

Q ss_pred             ccccccceecccCceEEEEEEecC--Cc----eEEEEEeecC-CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQD--GM----EVVVKGFNLQ-YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKA  104 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~--~~----~v~vK~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~  104 (263)
                      ...+..+.||+|+||.||.|...+  +.    .|++|.+... +.+....+.+|..+++.++||||++++|++.+.+..+
T Consensus       692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~  771 (1025)
T KOG1095|consen  692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPL  771 (1025)
T ss_pred             hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcE
Confidence            346778899999999999998442  33    4889988765 4567788999999999999999999999999999999


Q ss_pred             EEEeccCCCCHhhhhhhC------CCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccccc-----------
Q 039276          105 LILECMPHGSLGKCLSTS------NYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQTL-----------  167 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~~-----------  167 (263)
                      |++|||++|+|..|+++.      ...+.......++.||++|++||+++++|||||..+|+|++....           
T Consensus       772 i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGlArD  851 (1025)
T KOG1095|consen  772 ILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFGLARD  851 (1025)
T ss_pred             EEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccchhHh
Confidence            999999999999999986      555888899999999999999999999999999999999655431           


Q ss_pred             --------------ccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhh
Q 039276          168 --------------ATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVV  220 (263)
Q Consensus       168 --------------g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (263)
                                    -.+.||||            |||||||++||++| |..||....+.+.              +.. 
T Consensus       852 iy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v--------------~~~-  916 (1025)
T KOG1095|consen  852 IYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEV--------------LLD-  916 (1025)
T ss_pred             hhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHH--------------HHH-
Confidence                          14569999            99999999999999 9999875422211              110 


Q ss_pred             hhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          221 SANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                           -..++|.+.+..|++.+.++|..||+.+|++||++..|
T Consensus       917 -----~~~ggRL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i  954 (1025)
T KOG1095|consen  917 -----VLEGGRLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTI  954 (1025)
T ss_pred             -----HHhCCccCCCCCCChHHHHHHHHHccCChhhCccHHHH
Confidence                 11223666788999999999999999999999998653

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=100.00  E-value=4.8e-35  Score=239.02  Aligned_cols=211  Identities=15%  Similarity=0.204  Sum_probs=167.9

Q ss_pred             cccccceecccCceEEEEEEe-cCCceEEEEEeecC-CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           33 LFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQ-YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      +|+..+.||.|+||.||++.. .++..+++|.+... .....+.+..|+.+++.++|+|++++.+.+.+.+..++++||+
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC   80 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence            377889999999999999984 46899999998654 2334567788999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhhC-CCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------c
Q 039276          111 PHGSLGKCLSTS-NYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------T  166 (263)
Q Consensus       111 ~~~~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------~  166 (263)
                      ++++|.+++... ...+++..+..++.|++.||.|||+++++|+||+|+||+.+..                       .
T Consensus        81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~  160 (255)
T cd08219          81 DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTY  160 (255)
T ss_pred             CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeecccccccccc
Confidence            999999988653 3337888999999999999999999999999999999985431                       2


Q ss_pred             cccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccc
Q 039276          167 LATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT  234 (263)
Q Consensus       167 ~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (263)
                      .|+..|+||            |+||||+++++|++|+.||.....     .........               ....+.
T Consensus       161 ~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~-----~~~~~~~~~---------------~~~~~~  220 (255)
T cd08219         161 VGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSW-----KNLILKVCQ---------------GSYKPL  220 (255)
T ss_pred             cCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCH-----HHHHHHHhc---------------CCCCCC
Confidence            356779998            999999999999999999863210     000000000               000112


Q ss_pred             hHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          235 KEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       235 ~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +..++..+.+++.+||+.||++|||+.+|
T Consensus       221 ~~~~~~~~~~li~~~l~~~P~~Rp~~~~i  249 (255)
T cd08219         221 PSHYSYELRSLIKQMFKRNPRSRPSATTI  249 (255)
T ss_pred             CcccCHHHHHHHHHHHhCCcccCCCHHHH
Confidence            33455678999999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=100.00  E-value=1.7e-35  Score=249.82  Aligned_cols=201  Identities=17%  Similarity=0.225  Sum_probs=159.3

Q ss_pred             ceecccCceEEEEEEe-cCCceEEEEEeecC---CCchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCeeEEEEeccCC
Q 039276           38 NLISRGGFGSIYKAKI-QDGMEVVVKGFNLQ---YGGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFKALILECMPH  112 (263)
Q Consensus        38 ~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~---~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~  112 (263)
                      +.||+|+||.||+|.. .+++.||+|++...   ..........|.+++..+ +|+||+++++.+.+.+..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   80 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG   80 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence            3689999999999984 45889999999754   223445566788888766 799999999999999999999999999


Q ss_pred             CCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------cccc
Q 039276          113 GSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------TLAT  169 (263)
Q Consensus       113 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------~~g~  169 (263)
                      ++|..++..... +++..+..++.|++.||+|||+++++||||||+||+.+..                       ..|+
T Consensus        81 ~~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt  159 (321)
T cd05591          81 GDLMFQIQRSRK-FDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCGT  159 (321)
T ss_pred             CcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccCCccccccccC
Confidence            999998876544 8888999999999999999999999999999999995432                       2368


Q ss_pred             ccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHH
Q 039276          170 ISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQ  237 (263)
Q Consensus       170 ~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (263)
                      +.|+||            |||||||++|||++|+.||..... ...+.....            .        ....+..
T Consensus       160 ~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~-~~~~~~i~~------------~--------~~~~p~~  218 (321)
T cd05591         160 PDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNE-DDLFESILH------------D--------DVLYPVW  218 (321)
T ss_pred             ccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCH-HHHHHHHHc------------C--------CCCCCCC
Confidence            889999            999999999999999999864211 111111100            0        0011233


Q ss_pred             HHHHHHHhhccccccCcCCCCCc
Q 039276          238 CMSFVFNLAMECTVESPNQRINA  260 (263)
Q Consensus       238 ~~~~l~~l~~~cl~~~p~~Rpt~  260 (263)
                      +++++.+++.+||+.||++||+.
T Consensus       219 ~~~~~~~ll~~~L~~dp~~R~~~  241 (321)
T cd05591         219 LSKEAVSILKAFMTKNPNKRLGC  241 (321)
T ss_pred             CCHHHHHHHHHHhccCHHHcCCC
Confidence            56679999999999999999943

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=100.00  E-value=3.2e-35  Score=247.57  Aligned_cols=211  Identities=20%  Similarity=0.325  Sum_probs=165.4

Q ss_pred             ccccccceecccCceEEEEEEec-CCc----eEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ-DGM----EVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKAL  105 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~-~~~----~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l  105 (263)
                      .+|+..+.||+|+||.||+|.+. ++.    .|++|.+.... ....+.+.+|+.+++.++|+||+++++++... ..++
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~   85 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   85 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence            35999999999999999999843 333    48999987553 34466788899999999999999999998765 4689


Q ss_pred             EEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc-------------------
Q 039276          106 ILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT-------------------  166 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~-------------------  166 (263)
                      ++||+++|+|.+++......+++..+..++.|++.||+|||+++++||||||+||+.....                   
T Consensus        86 v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~  165 (316)
T cd05108          86 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKE  165 (316)
T ss_pred             eeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccccCCCcc
Confidence            9999999999999987655588889999999999999999999999999999999954321                   


Q ss_pred             ------cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccc
Q 039276          167 ------LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSR  227 (263)
Q Consensus       167 ------~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (263)
                            .++..|+||            |||||||++|||++ |+.||......  .+...            ...     
T Consensus       166 ~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~--~~~~~------------~~~-----  226 (316)
T cd05108         166 YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSI------------LEK-----  226 (316)
T ss_pred             eeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH--HHHHH------------HhC-----
Confidence                  124569999            99999999999998 99998642110  11111            110     


Q ss_pred             ccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          228 EDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       228 ~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                       ..+.+.+..++.++.+++.+||..+|++|||+.+|
T Consensus       227 -~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l  261 (316)
T cd05108         227 -GERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL  261 (316)
T ss_pred             -CCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHH
Confidence             11112234456678999999999999999999764

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=8.5e-35  Score=238.42  Aligned_cols=211  Identities=21%  Similarity=0.330  Sum_probs=168.2

Q ss_pred             cccccceecccCceEEEEEE-ecCCceEEEEEeecCCC-----chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEE
Q 039276           33 LFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYG-----GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALI  106 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~-----~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv  106 (263)
                      .|...+.||+|++|.||.+. ..+++++++|.+.....     ...+.+.+|+++++.++|+||+++++++.+....+++
T Consensus         3 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v   82 (263)
T cd06625           3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIF   82 (263)
T ss_pred             cccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEE
Confidence            48889999999999999998 45689999999865421     2245677899999999999999999999999999999


Q ss_pred             EeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc---------------------
Q 039276          107 LECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ---------------------  165 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~---------------------  165 (263)
                      +|++++++|.+++..... +++..+..++.|++.||+|||+.+++|+||+|+||+.+.+                     
T Consensus        83 ~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~  161 (263)
T cd06625          83 MEYMPGGSVKDQLKAYGA-LTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSG  161 (263)
T ss_pred             EEECCCCcHHHHHHHhCC-CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecccccccc
Confidence            999999999999876543 7888889999999999999999999999999999995431                     


Q ss_pred             -----ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccc
Q 039276          166 -----TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSRE  228 (263)
Q Consensus       166 -----~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (263)
                           ..++..|+||            ||||||+++|||++|+.||.....    ......         ..      ..
T Consensus       162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~----~~~~~~---------~~------~~  222 (263)
T cd06625         162 TGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEA----MAAIFK---------IA------TQ  222 (263)
T ss_pred             ccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccch----HHHHHH---------Hh------cc
Confidence                 1245679999            999999999999999999864211    000000         00      00


Q ss_pred             cccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          229 DEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       229 ~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ......+..+++++.+++.+||..+|++|||+.+|
T Consensus       223 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l  257 (263)
T cd06625         223 PTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEEL  257 (263)
T ss_pred             CCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHH
Confidence            01112234566679999999999999999999764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=100.00  E-value=8.5e-36  Score=252.08  Aligned_cols=199  Identities=21%  Similarity=0.239  Sum_probs=159.3

Q ss_pred             ceecccCceEEEEEE-ecCCceEEEEEeecCC---CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccCCC
Q 039276           38 NLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHG  113 (263)
Q Consensus        38 ~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~  113 (263)
                      +.||+|+||.||++. ..++..||+|.+....   ......+..|+++++.++|+||+++.+.+.+.+..++||||++++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence            368999999999998 4568999999997642   233456678999999999999999999999999999999999999


Q ss_pred             CHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhcc-CCccccccCCCccccccc-----------------------cccc
Q 039276          114 SLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHF-GHSTHLLLKEDQSLTQIQ-----------------------TLAT  169 (263)
Q Consensus       114 ~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~-~~i~h~dlk~~nil~~~~-----------------------~~g~  169 (263)
                      +|..++..... +++..+..++.|++.||+|||+ ++++||||||+||+.+..                       ..|+
T Consensus        81 ~L~~~l~~~~~-l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt  159 (325)
T cd05594          81 ELFFHLSRERV-FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGT  159 (325)
T ss_pred             cHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccccCC
Confidence            99998876543 8899999999999999999997 899999999999984321                       2478


Q ss_pred             ccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHH
Q 039276          170 ISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQ  237 (263)
Q Consensus       170 ~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (263)
                      +.|+||            |||||||++|||++|+.||.....  ...   ..         .+..       .....+..
T Consensus       160 ~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~--~~~---~~---------~i~~-------~~~~~p~~  218 (325)
T cd05594         160 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--EKL---FE---------LILM-------EEIRFPRT  218 (325)
T ss_pred             cccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCH--HHH---HH---------HHhc-------CCCCCCCC
Confidence            899999            999999999999999999853211  000   00         0000       00012334


Q ss_pred             HHHHHHHhhccccccCcCCCC
Q 039276          238 CMSFVFNLAMECTVESPNQRI  258 (263)
Q Consensus       238 ~~~~l~~l~~~cl~~~p~~Rp  258 (263)
                      +++++.+++.+||+.||++|+
T Consensus       219 ~~~~~~~li~~~L~~dP~~R~  239 (325)
T cd05594         219 LSPEAKSLLSGLLKKDPKQRL  239 (325)
T ss_pred             CCHHHHHHHHHHhhcCHHHhC
Confidence            566799999999999999997

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=100.00  E-value=2.9e-35  Score=253.22  Aligned_cols=227  Identities=18%  Similarity=0.176  Sum_probs=166.3

Q ss_pred             ccccceecccCceEEEEEEe-cCCceEEEEEeecC--CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCC-----eeEE
Q 039276           34 FSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQ--YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDD-----FKAL  105 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-----~~~l  105 (263)
                      |+..+.||+|+||.||++.. .+++.||+|.+...  .....+.+.+|+++++.++|+||+++++++....     ..|+
T Consensus         2 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l   81 (372)
T cd07853           2 VEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYV   81 (372)
T ss_pred             CcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEE
Confidence            77889999999999999984 56899999998654  2234567788999999999999999999997765     7899


Q ss_pred             EEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc--------------------
Q 039276          106 ILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ--------------------  165 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~--------------------  165 (263)
                      ++||+.+ +|.+++.... .+++..+..++.|++.||+|||+++++||||||+||+.+..                    
T Consensus        82 v~e~~~~-~l~~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~  159 (372)
T cd07853          82 VTELMQS-DLHKIIVSPQ-PLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESK  159 (372)
T ss_pred             Eeecccc-CHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccCccc
Confidence            9999964 8888876544 38899999999999999999999999999999999995432                    


Q ss_pred             ----ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhh----------
Q 039276          166 ----TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMK----------  218 (263)
Q Consensus       166 ----~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~----------  218 (263)
                          ..++..|+||             |||||||+++||++|+.||...... ..+..............          
T Consensus       160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~~g~~~~~~~~~~~~~~~~  238 (372)
T cd07853         160 HMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPI-QQLDLITDLLGTPSLEAMRSACEGARA  238 (372)
T ss_pred             cCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHH-HHHHHHHHHcCCCCHHHHHHhhHHHHH
Confidence                1346779998             9999999999999999999643211 11111111111110000          


Q ss_pred             hhhhcccc--cccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          219 VVSANLLS--REDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       219 ~~~~~~~~--~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .+......  ............++++.+++.+||+.||++|||+.|+
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~  285 (372)
T cd07853         239 HILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADA  285 (372)
T ss_pred             HHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHH
Confidence            00000000  0000001123346779999999999999999999764

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=100.00  E-value=3.4e-35  Score=247.46  Aligned_cols=202  Identities=15%  Similarity=0.247  Sum_probs=159.5

Q ss_pred             ceecccCceEEEEEEe-cCCceEEEEEeecCC---CchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCeeEEEEeccCC
Q 039276           38 NLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY---GGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFKALILECMPH  112 (263)
Q Consensus        38 ~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~  112 (263)
                      +.||+|+||.||++.. .++..||+|+++...   .........|..++... +|++++++++.+.+.+..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   80 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence            4689999999999994 468899999997642   23345566677777654 899999999999999999999999999


Q ss_pred             CCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------cccc
Q 039276          113 GSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------TLAT  169 (263)
Q Consensus       113 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------~~g~  169 (263)
                      ++|..++..... +++..+..++.|++.||+|||+++++||||||+||+.+..                       ..|+
T Consensus        81 g~L~~~i~~~~~-~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt  159 (316)
T cd05620          81 GDLMFHIQDKGR-FDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCGT  159 (316)
T ss_pred             CcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccCCC
Confidence            999999876544 7888999999999999999999999999999999985321                       2468


Q ss_pred             ccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHH
Q 039276          170 ISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQ  237 (263)
Q Consensus       170 ~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (263)
                      ..|+||            |||||||++|||++|+.||..... ...+...             ...       ....+..
T Consensus       160 ~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~-~~~~~~~-------------~~~-------~~~~~~~  218 (316)
T cd05620         160 PDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDE-DELFESI-------------RVD-------TPHYPRW  218 (316)
T ss_pred             cCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH-HHHHHHH-------------HhC-------CCCCCCC
Confidence            889999            999999999999999999863211 0001000             000       0011234


Q ss_pred             HHHHHHHhhccccccCcCCCCCcc
Q 039276          238 CMSFVFNLAMECTVESPNQRINAK  261 (263)
Q Consensus       238 ~~~~l~~l~~~cl~~~p~~Rpt~~  261 (263)
                      ++.++.+++.+||+.||++||++.
T Consensus       219 ~~~~~~~li~~~l~~dP~~R~~~~  242 (316)
T cd05620         219 ITKESKDILEKLFERDPTRRLGVV  242 (316)
T ss_pred             CCHHHHHHHHHHccCCHHHcCCCh
Confidence            566799999999999999999974

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=5.5e-35  Score=239.87  Aligned_cols=204  Identities=19%  Similarity=0.287  Sum_probs=159.0

Q ss_pred             ceecccCceEEEEEEecC-------------CceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeE
Q 039276           38 NLISRGGFGSIYKAKIQD-------------GMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKA  104 (263)
Q Consensus        38 ~~lg~g~~g~v~~~~~~~-------------~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~  104 (263)
                      +.||+|+||.||+|....             ..++++|.+..........+.+|+.+++.++||||+++++++.+....+
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~   80 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI   80 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence            358999999999997431             2358889887665555667888999999999999999999999888899


Q ss_pred             EEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-------------------
Q 039276          105 LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-------------------  165 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-------------------  165 (263)
                      +++||+++++|..++......+++..++.++.|++.||+|||+++++|+||||+||+....                   
T Consensus        81 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~  160 (262)
T cd05077          81 MVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPI  160 (262)
T ss_pred             EEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCc
Confidence            9999999999999887655558889999999999999999999999999999999997421                   


Q ss_pred             -------ccccccccCc-------------chhhHHHHHHHHH-hCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcc
Q 039276          166 -------TLATISYMAP-------------DTYNFGIMIMETF-SGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANL  224 (263)
Q Consensus       166 -------~~g~~~y~aP-------------Dv~SlG~il~ell-~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (263)
                             ..++..|+||             |||||||++|||+ +|..||......+  ......            ...
T Consensus       161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~--~~~~~~------------~~~  226 (262)
T cd05077         161 TVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAE--KERFYE------------GQC  226 (262)
T ss_pred             cccCcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhH--HHHHHh------------cCc
Confidence                   1246679999             9999999999998 4888875321100  000000            000


Q ss_pred             cccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          225 LSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       225 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                              ......++++.+++.+||+.||.+||++.+|
T Consensus       227 --------~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~i  257 (262)
T cd05077         227 --------MLVTPSCKELADLMTHCMNYDPNQRPFFRAI  257 (262)
T ss_pred             --------cCCCCChHHHHHHHHHHcCCChhhCcCHHHH
Confidence                    0011123568999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=100.00  E-value=2.7e-35  Score=252.36  Aligned_cols=209  Identities=19%  Similarity=0.236  Sum_probs=164.1

Q ss_pred             cccccceecccCceEEEEEE-ecCCceEEEEEeecC---CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEe
Q 039276           33 LFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQ---YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      +|+..+.||+|+||.||++. ..+++.||+|++...   .......+..|+.++..++|++++++++.+.+.+..++|||
T Consensus         2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E   81 (360)
T cd05627           2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIME   81 (360)
T ss_pred             CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence            48889999999999999998 456899999999753   22345567789999999999999999999999999999999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc------------------------
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI------------------------  164 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~------------------------  164 (263)
                      |+++|+|.+++..... +++..+..++.|++.||+|||+++++||||||+||+++.                        
T Consensus        82 ~~~gg~L~~~l~~~~~-l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~  160 (360)
T cd05627          82 FLPGGDMMTLLMKKDT-LSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFY  160 (360)
T ss_pred             CCCCccHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccccccc
Confidence            9999999999976544 888999999999999999999999999999999999432                        


Q ss_pred             ----------------------------------cccccccccCc------------chhhHHHHHHHHHhCCCCCcccc
Q 039276          165 ----------------------------------QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFF  198 (263)
Q Consensus       165 ----------------------------------~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~  198 (263)
                                                        ...||+.|+||            |||||||++|||++|+.||....
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~  240 (360)
T cd05627         161 RNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSET  240 (360)
T ss_pred             cccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCCC
Confidence                                              12478899999            99999999999999999986421


Q ss_pred             CCCchhhhHhhhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCc
Q 039276          199 HGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINA  260 (263)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~  260 (263)
                      .. ..+....            .    .......+....+++++.+++.+|+. +|.+|++.
T Consensus       241 ~~-~~~~~i~------------~----~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~  284 (360)
T cd05627         241 PQ-ETYRKVM------------N----WKETLVFPPEVPISEKAKDLILRFCT-DSENRIGS  284 (360)
T ss_pred             HH-HHHHHHH------------c----CCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCC
Confidence            11 0111110            0    00000011112355678889988764 99999864

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=100.00  E-value=5.7e-35  Score=239.74  Aligned_cols=210  Identities=22%  Similarity=0.331  Sum_probs=167.2

Q ss_pred             cccccceecccCceEEEEEEe-cCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccC
Q 039276           33 LFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMP  111 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~  111 (263)
                      .|...+.||+|++|.||+|.+ ..+..+++|.+... ......+.+|+++++.++|+|++++++.+...+..+++|||++
T Consensus         7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   85 (263)
T cd05052           7 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT   85 (263)
T ss_pred             HeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCC
Confidence            488889999999999999994 45888999988754 3345678889999999999999999999988889999999999


Q ss_pred             CCCHhhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc------------------------
Q 039276          112 HGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT------------------------  166 (263)
Q Consensus       112 ~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~------------------------  166 (263)
                      +++|.+++.... ..+++..+..++.|++.||+|||+++++|+||+|+||+.....                        
T Consensus        86 ~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~  165 (263)
T cd05052          86 YGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA  165 (263)
T ss_pred             CCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccceeeccCCC
Confidence            999999987543 3378889999999999999999999999999999999954211                        


Q ss_pred             cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccccc
Q 039276          167 LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFM  233 (263)
Q Consensus       167 ~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (263)
                      .++..|+||            |||||||++|||++ |..||.....     .+....         .....      +..
T Consensus       166 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~-----~~~~~~---------~~~~~------~~~  225 (263)
T cd05052         166 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYEL---------LEKGY------RME  225 (263)
T ss_pred             CCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHH---------HHCCC------CCC
Confidence            124569999            99999999999998 9999753211     111100         00000      112


Q ss_pred             chHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          234 TKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       234 ~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .+..++.++.+++.+||+.+|++|||+.+|
T Consensus       226 ~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l  255 (263)
T cd05052         226 RPEGCPPKVYELMRACWQWNPSDRPSFAEI  255 (263)
T ss_pred             CCCCCCHHHHHHHHHHccCCcccCCCHHHH
Confidence            234566779999999999999999999864

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=3e-35  Score=242.95  Aligned_cols=203  Identities=19%  Similarity=0.297  Sum_probs=157.9

Q ss_pred             eecccCceEEEEEEecC-------------------------CceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeE
Q 039276           39 LISRGGFGSIYKAKIQD-------------------------GMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKI   93 (263)
Q Consensus        39 ~lg~g~~g~v~~~~~~~-------------------------~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~   93 (263)
                      .||+|+||.||+|....                         ...|++|.+..........+.+|+.+++.++|+||+++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            58999999999997421                         23578888866544445677888999999999999999


Q ss_pred             eeEeecCCeeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc--------
Q 039276           94 ISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ--------  165 (263)
Q Consensus        94 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~--------  165 (263)
                      ++++.+....++||||+++++|..++......+++..+..++.|++.||+|||+++++||||||+||++...        
T Consensus        82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~  161 (274)
T cd05076          82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSP  161 (274)
T ss_pred             EEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCccc
Confidence            999999889999999999999999987655558899999999999999999999999999999999996421        


Q ss_pred             ------------------ccccccccCc-------------chhhHHHHHHHHH-hCCCCCccccCCCchhhhHhhhcCC
Q 039276          166 ------------------TLATISYMAP-------------DTYNFGIMIMETF-SGKKPTIKFFHGEMTLKHWVNDLLP  213 (263)
Q Consensus       166 ------------------~~g~~~y~aP-------------Dv~SlG~il~ell-~g~~Pf~~~~~~~~~~~~~~~~~~~  213 (263)
                                        ..++..|+||             |||||||++||++ +|+.||......+  ....      
T Consensus       162 ~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~--~~~~------  233 (274)
T cd05076         162 FIKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE--KERF------  233 (274)
T ss_pred             eeeecCCccccccccccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH--HHHH------
Confidence                              1246678888             9999999999995 6999986431111  1111      


Q ss_pred             CchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          214 NSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                            .....        ..+....+++.+++.+||+.+|++|||+.+|
T Consensus       234 ------~~~~~--------~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i  269 (274)
T cd05076         234 ------YEKKH--------RLPEPSCKELATLISQCLTYEPTQRPSFRTI  269 (274)
T ss_pred             ------HHhcc--------CCCCCCChHHHHHHHHHcccChhhCcCHHHH
Confidence                  00000        0011123458999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=100.00  E-value=4.9e-35  Score=242.50  Aligned_cols=212  Identities=25%  Similarity=0.475  Sum_probs=167.5

Q ss_pred             ccccccceecccCceEEEEEEecC-C-----ceEEEEEeecCCC-chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQD-G-----MEVVVKGFNLQYG-GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKA  104 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~-~-----~~v~vK~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~  104 (263)
                      .+|+..+.||+|+||.||+|.... +     ..+++|.+..... .....+.+|+++++.++|+|++++++++.+.+..+
T Consensus         5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T cd05048           5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC   84 (283)
T ss_pred             HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence            358889999999999999998432 2     5789998875532 33556888999999999999999999999888899


Q ss_pred             EEEeccCCCCHhhhhhhCC---------------CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc---
Q 039276          105 LILECMPHGSLGKCLSTSN---------------YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT---  166 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~---  166 (263)
                      +++||+++++|.+++....               ..+++..+..++.|++.||+|||+++++|+||||+||+.+...   
T Consensus        85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~  164 (283)
T cd05048          85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVK  164 (283)
T ss_pred             EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCCcEE
Confidence            9999999999999987532               2367888899999999999999999999999999999854321   


Q ss_pred             ----------------------cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhc
Q 039276          167 ----------------------LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDL  211 (263)
Q Consensus       167 ----------------------~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~  211 (263)
                                            .+++.|+||            |||||||++|||++ |..||......  .+       
T Consensus       165 L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~--~~-------  235 (283)
T cd05048         165 ISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ--EV-------  235 (283)
T ss_pred             ECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH--HH-------
Confidence                                  234569999            99999999999998 99998643211  11       


Q ss_pred             CCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          212 LPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                           ...+...      ...+.+..+++++.+++.+||+.||.+|||++||
T Consensus       236 -----~~~i~~~------~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i  276 (283)
T cd05048         236 -----IEMIRSR------QLLPCPEDCPARVYALMIECWNEIPARRPRFKDI  276 (283)
T ss_pred             -----HHHHHcC------CcCCCcccCCHHHHHHHHHHccCChhhCcCHHHH
Confidence                 1111110      0112245677889999999999999999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-36  Score=250.62  Aligned_cols=212  Identities=25%  Similarity=0.364  Sum_probs=176.7

Q ss_pred             cccccccceecccCceEEEEEE-ecCCceEEEEEeecCCCc-hHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEe
Q 039276           31 LFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGG-AFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~-~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      ...|...+.||+|+||.||+|. ...++.||+|++...... ....+.+|+.++..++++||.++++.+..+..++++||
T Consensus        12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMe   91 (467)
T KOG0201|consen   12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIME   91 (467)
T ss_pred             ccccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHH
Confidence            3458888999999999999999 556889999999887544 45667789999999999999999999999999999999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-----------------------c
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-----------------------Q  165 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-----------------------~  165 (263)
                      ||.+|++.+.++.+.. +.+..+..++.+++.|+.|||.++.+|||||+.||++..                       +
T Consensus        92 y~~gGsv~~lL~~~~~-~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~t  170 (467)
T KOG0201|consen   92 YCGGGSVLDLLKSGNI-LDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRKT  170 (467)
T ss_pred             HhcCcchhhhhccCCC-CccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeechhhcccc
Confidence            9999999999987654 477888889999999999999999999999999999433                       4


Q ss_pred             ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccccc
Q 039276          166 TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFM  233 (263)
Q Consensus       166 ~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (263)
                      .+||+.||||            ||||||++++||.+|.+|+...              .+-++.-++.+...+.      
T Consensus       171 fvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~--------------hPmrvlflIpk~~PP~------  230 (467)
T KOG0201|consen  171 FVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKL--------------HPMRVLFLIPKSAPPR------  230 (467)
T ss_pred             ccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCccc--------------CcceEEEeccCCCCCc------
Confidence            5799999999            9999999999999999997643              2222333333322222      


Q ss_pred             chHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          234 TKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       234 ~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ....+++.+.+++..||..||+.||||.++
T Consensus       231 L~~~~S~~~kEFV~~CL~k~P~~RpsA~~L  260 (467)
T KOG0201|consen  231 LDGDFSPPFKEFVEACLDKNPEFRPSAKEL  260 (467)
T ss_pred             cccccCHHHHHHHHHHhhcCcccCcCHHHH
Confidence            123556669999999999999999999874

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=100.00  E-value=1.4e-34  Score=239.78  Aligned_cols=205  Identities=16%  Similarity=0.191  Sum_probs=159.0

Q ss_pred             ecccCceEEEEEE-ecCCceEEEEEeecCCC---chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccCCCCH
Q 039276           40 ISRGGFGSIYKAK-IQDGMEVVVKGFNLQYG---GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSL  115 (263)
Q Consensus        40 lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~---~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L  115 (263)
                      ||+|+||+||++. ..+++.+|+|.+.....   ...+.+..|+++++.++|+|++++.+++......+++|||+++++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            6999999999998 45688999999875422   2335567899999999999999999999988899999999999999


Q ss_pred             hhhhhh---CCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------cccc
Q 039276          116 GKCLST---SNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------TLAT  169 (263)
Q Consensus       116 ~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------~~g~  169 (263)
                      ..++..   ....+++..+..++.|++.||+|||+++++|+||||+||+.+..                       ..|+
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~  160 (280)
T cd05608          81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAGT  160 (280)
T ss_pred             HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccccCCC
Confidence            887743   22348899999999999999999999999999999999985321                       2467


Q ss_pred             ccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHH
Q 039276          170 ISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQ  237 (263)
Q Consensus       170 ~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (263)
                      +.|+||            |||||||++|||++|+.||........ ......            ... ..   ....+..
T Consensus       161 ~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~-~~~~~~------------~~~-~~---~~~~~~~  223 (280)
T cd05608         161 PGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE-NKELKQ------------RIL-ND---SVTYPDK  223 (280)
T ss_pred             cCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchh-HHHHHH------------hhc-cc---CCCCccc
Confidence            889999            999999999999999999864211100 000000            000 00   0012334


Q ss_pred             HHHHHHHhhccccccCcCCCCCcc
Q 039276          238 CMSFVFNLAMECTVESPNQRINAK  261 (263)
Q Consensus       238 ~~~~l~~l~~~cl~~~p~~Rpt~~  261 (263)
                      +++++.+++.+||+.||++||+++
T Consensus       224 ~~~~~~~li~~~l~~~P~~R~~~~  247 (280)
T cd05608         224 FSPASKSFCEALLAKDPEKRLGFR  247 (280)
T ss_pred             CCHHHHHHHHHHhcCCHHHhcCCC
Confidence            667799999999999999999654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>PTZ00036 glycogen synthase kinase; Provisional

Probab=100.00  E-value=5.7e-35  Score=256.10  Aligned_cols=226  Identities=20%  Similarity=0.239  Sum_probs=163.0

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecC--------Ce
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKD--------DF  102 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~--------~~  102 (263)
                      .+|...+.||+|+||.||+|.. .+++.||+|++....    ....+|+.+++.++|+||+++.+++...        .+
T Consensus        66 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~  141 (440)
T PTZ00036         66 KSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIF  141 (440)
T ss_pred             CeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceE
Confidence            4699999999999999999984 568899999886442    2334699999999999999998876432        25


Q ss_pred             eEEEEeccCCCCHhhhhhh---CCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc--------------
Q 039276          103 KALILECMPHGSLGKCLST---SNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ--------------  165 (263)
Q Consensus       103 ~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~--------------  165 (263)
                      .+++|||+++ ++.+++..   ....+++..++.++.|++.||+|||+++++||||||+||+++..              
T Consensus       142 l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~  220 (440)
T PTZ00036        142 LNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKN  220 (440)
T ss_pred             EEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccccchh
Confidence            6799999986 77776642   23448889999999999999999999999999999999995421              


Q ss_pred             ---------ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhh--hh
Q 039276          166 ---------TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKV--VS  221 (263)
Q Consensus       166 ---------~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~--~~  221 (263)
                               ..||+.|+||             |||||||++|||++|..||...... ..+...............  ..
T Consensus       221 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~-~~~~~i~~~~~~p~~~~~~~~~  299 (440)
T PTZ00036        221 LLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSV-DQLVRIIQVLGTPTEDQLKEMN  299 (440)
T ss_pred             ccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCCHHHHHHhc
Confidence                     2467889999             9999999999999999998643211 122222211111111000  00


Q ss_pred             hcc-------cccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          222 ANL-------LSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       222 ~~~-------~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ...       ......+...+...++++.+|+.+||+.||.+|||+.|+
T Consensus       300 ~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~  348 (440)
T PTZ00036        300 PNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEA  348 (440)
T ss_pred             hhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHH
Confidence            000       000001111223456789999999999999999999764

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=100.00  E-value=4.8e-35  Score=242.13  Aligned_cols=212  Identities=26%  Similarity=0.459  Sum_probs=167.8

Q ss_pred             ccccccceecccCceEEEEEEec------CCceEEEEEeecCCCc-hHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ------DGMEVVVKGFNLQYGG-AFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKA  104 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~------~~~~v~vK~~~~~~~~-~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~  104 (263)
                      ..|...+.||+|+||.||+|...      ++..|++|.+...... ..+.+.+|+++++.++|+|++++++++...+..+
T Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   84 (280)
T cd05049           5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI   84 (280)
T ss_pred             HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence            45888999999999999999853      2478999999766443 4567889999999999999999999999999999


Q ss_pred             EEEeccCCCCHhhhhhhCC-------------CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc------
Q 039276          105 LILECMPHGSLGKCLSTSN-------------YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ------  165 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~-------------~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~------  165 (263)
                      ++|||+++++|.+++...+             ..+++..+..++.|++.|++|||+++++|+||+|+||+.+..      
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~kl~  164 (280)
T cd05049          85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVKIG  164 (280)
T ss_pred             EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeEEEC
Confidence            9999999999999997542             226788889999999999999999999999999999985321      


Q ss_pred             -------------------ccccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCC
Q 039276          166 -------------------TLATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLP  213 (263)
Q Consensus       166 -------------------~~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~  213 (263)
                                         ..++..|+||            |||||||++|||++ |+.||......  ......     
T Consensus       165 d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~--~~~~~~-----  237 (280)
T cd05049         165 DFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNE--EVIECI-----  237 (280)
T ss_pred             CcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHH-----
Confidence                               1224569999            99999999999998 99998643211  111110     


Q ss_pred             CchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          214 NSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                             ....      ....+..++.++.+++.+||+.||++|||+.||
T Consensus       238 -------~~~~------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ei  274 (280)
T cd05049         238 -------TQGR------LLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDI  274 (280)
T ss_pred             -------HcCC------cCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHH
Confidence                   0000      001123456679999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=100.00  E-value=7.2e-36  Score=233.71  Aligned_cols=212  Identities=22%  Similarity=0.297  Sum_probs=173.7

Q ss_pred             cccccceecccCceEEEEEE-ecCCceEEEEEeecC----CCch----HHHHHHHHHHHhhc-CCCcceeEeeEeecCCe
Q 039276           33 LFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQ----YGGA----FKNLDVECNMMKII-RHQNLIKIISSCSKDDF  102 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~----~~~~----~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~  102 (263)
                      .|+..+.+|.|..+.|-+++ ..+|..+++|++..-    ..+.    ...-.+|+.+++++ .||+|+++.++++++.+
T Consensus        18 ~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF   97 (411)
T KOG0599|consen   18 KYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDAF   97 (411)
T ss_pred             hcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcch
Confidence            38888999999999999988 567889999998543    1222    23345699999999 79999999999999999


Q ss_pred             eEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------
Q 039276          103 KALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------  165 (263)
Q Consensus       103 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------  165 (263)
                      .++|+|.|+.|.|.+++.+.-. +++.....|+.|++.|++|||.+.||||||||+|||.+.+                 
T Consensus        98 ~FlVFdl~prGELFDyLts~Vt-lSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~G  176 (411)
T KOG0599|consen   98 VFLVFDLMPRGELFDYLTSKVT-LSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQLEPG  176 (411)
T ss_pred             hhhhhhhcccchHHHHhhhhee-ecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeeccCCc
Confidence            9999999999999999986544 8899999999999999999999999999999999995432                 


Q ss_pred             -----ccccccccCc------------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhh
Q 039276          166 -----TLATISYMAP------------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSA  222 (263)
Q Consensus       166 -----~~g~~~y~aP------------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (263)
                           ..||++|+||                  |+||+|||+|-|+-|.+||-+-                 .-......
T Consensus       177 ekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHR-----------------kQmlMLR~  239 (411)
T KOG0599|consen  177 EKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHR-----------------KQMLMLRM  239 (411)
T ss_pred             hhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHH-----------------HHHHHHHH
Confidence                 3789999999                  9999999999999999998531                 01112222


Q ss_pred             cccccccccccchHHHHHHHHHhhccccccCcCCCCCccC
Q 039276          223 NLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKE  262 (263)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~e  262 (263)
                      .+.....-+.+...+++++..+|+.+||+.||.+|.|++|
T Consensus       240 ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake  279 (411)
T KOG0599|consen  240 IMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKE  279 (411)
T ss_pred             HHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHH
Confidence            2233333334456788889999999999999999999876

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=100.00  E-value=6.7e-37  Score=242.62  Aligned_cols=215  Identities=19%  Similarity=0.276  Sum_probs=184.3

Q ss_pred             ccccccccccceecccCceEEEEEE-ecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEE
Q 039276           28 FSGLFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALI  106 (263)
Q Consensus        28 ~~~~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv  106 (263)
                      -...+.|+..++||+|+||.||++. ..+|..+|+|.+...  .+.+++..||.++++++.+++|+++|.+..+..+++|
T Consensus        29 K~PEEVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIV  106 (502)
T KOG0574|consen   29 KPPEEVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIV  106 (502)
T ss_pred             CChHHHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEee
Confidence            3345679999999999999999998 667999999998876  4778899999999999999999999999999999999


Q ss_pred             EeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc----------------------
Q 039276          107 LECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI----------------------  164 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~----------------------  164 (263)
                      ||||-.|++.+.++.+++.+.+..+..++.+.++||+|||+..-+|||||..|||+++                      
T Consensus       107 MEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKR  186 (502)
T KOG0574|consen  107 MEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKR  186 (502)
T ss_pred             hhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhhHHhh
Confidence            9999999999999988888999999999999999999999999999999999999554                      


Q ss_pred             -cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccc
Q 039276          165 -QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEH  231 (263)
Q Consensus       165 -~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (263)
                       ++.||+.||||            ||||||++..||..|++||.+...-...+              .    ....++.-
T Consensus       187 NTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIF--------------M----IPT~PPPT  248 (502)
T KOG0574|consen  187 NTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIF--------------M----IPTKPPPT  248 (502)
T ss_pred             CccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeE--------------e----ccCCCCCC
Confidence             34689999999            99999999999999999987542111100              0    01122333


Q ss_pred             ccchHHHHHHHHHhhccccccCcCCCCCccC
Q 039276          232 FMTKEQCMSFVFNLAMECTVESPNQRINAKE  262 (263)
Q Consensus       232 ~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~e  262 (263)
                      +..+...++++.+++++||..+|++|-|+.+
T Consensus       249 F~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~  279 (502)
T KOG0574|consen  249 FKKPEEWSSEFNDFIRSCLIKKPEERKTALR  279 (502)
T ss_pred             CCChHhhhhHHHHHHHHHhcCCHHHHHHHHH
Confidence            4567889999999999999999999998754

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=100.00  E-value=4.7e-36  Score=254.91  Aligned_cols=202  Identities=20%  Similarity=0.354  Sum_probs=168.4

Q ss_pred             ccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccCCC
Q 039276           34 FSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHG  113 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~  113 (263)
                      +..++-||.|+-|.||+|+.. +..||||+++.-.       ..+|.=|++++|+||+++.|+|....-+|||||||+.|
T Consensus       126 IsELeWlGSGaQGAVF~Grl~-netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~G  197 (904)
T KOG4721|consen  126 ISELEWLGSGAQGAVFLGRLH-NETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQG  197 (904)
T ss_pred             hhhhhhhccCcccceeeeecc-CceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccc
Confidence            556778999999999999988 7899999865332       23788889999999999999998888889999999999


Q ss_pred             CHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc----------------------ccccccc
Q 039276          114 SLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI----------------------QTLATIS  171 (263)
Q Consensus       114 ~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~----------------------~~~g~~~  171 (263)
                      -|...++.+.. +.....+.+..+|+.|+.|||.+.|||||||.-|||+..                      .+.||+.
T Consensus       198 qL~~VLka~~~-itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMSFaGTVa  276 (904)
T KOG4721|consen  198 QLYEVLKAGRP-ITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMSFAGTVA  276 (904)
T ss_pred             cHHHHHhccCc-cCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhhhhhhhhhhhhHh
Confidence            99999987665 788889999999999999999999999999999999432                      3479999


Q ss_pred             ccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHHHH
Q 039276          172 YMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCM  239 (263)
Q Consensus       172 y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (263)
                      ||||            |||||||+||||+||..||.+.....+.+.                   ........+.+..|+
T Consensus       277 WMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwG-------------------VGsNsL~LpvPstcP  337 (904)
T KOG4721|consen  277 WMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWG-------------------VGSNSLHLPVPSTCP  337 (904)
T ss_pred             hhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEe-------------------ccCCcccccCcccCc
Confidence            9999            999999999999999999875422221111                   111222234578889


Q ss_pred             HHHHHhhccccccCcCCCCCccCC
Q 039276          240 SFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       240 ~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +-+.=|+++||+-.|..||++++|
T Consensus       338 ~GfklL~Kqcw~sKpRNRPSFrqi  361 (904)
T KOG4721|consen  338 DGFKLLLKQCWNSKPRNRPSFRQI  361 (904)
T ss_pred             hHHHHHHHHHHhcCCCCCccHHHH
Confidence            999999999999999999999864

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=8.7e-35  Score=238.34  Aligned_cols=211  Identities=22%  Similarity=0.354  Sum_probs=168.0

Q ss_pred             ccccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccC
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMP  111 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~  111 (263)
                      .+|+..+.||+|++|.||+|...++..|++|.+.... ...+.+.+|+++++.++|+|++++++++...+..++++|+++
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   84 (261)
T cd05068           6 TSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMK   84 (261)
T ss_pred             hheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeeccc
Confidence            3488899999999999999997767889999987543 235668889999999999999999999998889999999999


Q ss_pred             CCCHhhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc---------------------cc-
Q 039276          112 HGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT---------------------LA-  168 (263)
Q Consensus       112 ~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~---------------------~g-  168 (263)
                      +++|.+++.... ..+++..+..++.|++.||.+||+.+++|+||+|+||+.+...                     .+ 
T Consensus        85 ~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~  164 (261)
T cd05068          85 YGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGA  164 (261)
T ss_pred             CCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcccccCCC
Confidence            999999997643 3488999999999999999999999999999999999954321                     11 


Q ss_pred             --cccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccccc
Q 039276          169 --TISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFM  233 (263)
Q Consensus       169 --~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (263)
                        +..|+||            ||||||++++||++ |+.||...... ..+...             ...      ...+
T Consensus       165 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-~~~~~~-------------~~~------~~~~  224 (261)
T cd05068         165 KFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA-EVLQQV-------------DQG------YRMP  224 (261)
T ss_pred             cCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH-HHHHHH-------------HcC------CCCC
Confidence              2358999            99999999999999 99998632110 001100             000      0011


Q ss_pred             chHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          234 TKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       234 ~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .+..+++.+.+++.+|++.+|++||++++|
T Consensus       225 ~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l  254 (261)
T cd05068         225 CPPGCPKELYDIMLDCWKEDPDDRPTFETL  254 (261)
T ss_pred             CCCcCCHHHHHHHHHHhhcCcccCCCHHHH
Confidence            233456679999999999999999999864

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=100.00  E-value=8e-35  Score=235.91  Aligned_cols=229  Identities=19%  Similarity=0.205  Sum_probs=170.2

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCCC--chHHHHHHHHHHHhhcCCCc-ceeEeeEeecCC------
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYG--GAFKNLDVECNMMKIIRHQN-LIKIISSCSKDD------  101 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~--~~~~~~~~e~~~l~~~~h~~-i~~~~~~~~~~~------  101 (263)
                      ..|...+++|+|+||.||+|+ ..+|+.||+|++.....  +......+|+.+++.++|+| |+.+.+++.+.+      
T Consensus        11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~   90 (323)
T KOG0594|consen   11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG   90 (323)
T ss_pred             HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence            448889999999999999999 66789999999987633  34555678999999999999 999999998766      


Q ss_pred             eeEEEEeccCCCCHhhhhhhCC---CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc------------
Q 039276          102 FKALILECMPHGSLGKCLSTSN---YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT------------  166 (263)
Q Consensus       102 ~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~------------  166 (263)
                      .+++|+||+.. +|.+++....   ...+...++.++.|++.||+|||+++|+||||||+|++++..+            
T Consensus        91 ~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra  169 (323)
T KOG0594|consen   91 KLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARA  169 (323)
T ss_pred             eEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHHH
Confidence            88999999966 9999998765   3477788999999999999999999999999999999965533            


Q ss_pred             -----------cccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhh---h
Q 039276          167 -----------LATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMK---V  219 (263)
Q Consensus       167 -----------~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~---~  219 (263)
                                 ++|..|+||             ||||+|||+.||++++.-|....+-+ .+...........-..   .
T Consensus       170 ~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~-ql~~If~~lGtP~e~~Wp~v  248 (323)
T KOG0594|consen  170 FSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEID-QLFRIFRLLGTPNEKDWPGV  248 (323)
T ss_pred             hcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHH-HHHHHHHHcCCCCccCCCCc
Confidence                       468889999             99999999999999999887543211 1111111111110000   0


Q ss_pred             h---hhc-cccccccccc---chHHHHHHHHHhhccccccCcCCCCCccC
Q 039276          220 V---SAN-LLSREDEHFM---TKEQCMSFVFNLAMECTVESPNQRINAKE  262 (263)
Q Consensus       220 ~---~~~-~~~~~~~~~~---~~~~~~~~l~~l~~~cl~~~p~~Rpt~~e  262 (263)
                      .   +-. ..........   ..+..+.+..+++.+||+.+|.+|.|++.
T Consensus       249 ~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~  298 (323)
T KOG0594|consen  249 SSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKG  298 (323)
T ss_pred             cccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHH
Confidence            0   000 0000000000   01222347899999999999999999864

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6e-35  Score=242.51  Aligned_cols=209  Identities=18%  Similarity=0.219  Sum_probs=163.9

Q ss_pred             ccccceecccCceEEEEEEe-cCCceEEEEEeecCCC---chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           34 FSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYG---GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~---~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      |+..+.||+|+||.||++.. .+++.||+|.+.....   .....+.+|+.+++.++|+|++++++.+.+....+++|||
T Consensus         2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (285)
T cd05605           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL   81 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEec
Confidence            77889999999999999984 4688999999975422   2234567899999999999999999999888899999999


Q ss_pred             cCCCCHhhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc----------------------c
Q 039276          110 MPHGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ----------------------T  166 (263)
Q Consensus       110 ~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~----------------------~  166 (263)
                      +++++|.+++.... ..+++..+..++.|++.||+|||+.+++|+||+|+||+.+..                      .
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~  161 (285)
T cd05605          82 MNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETIRGR  161 (285)
T ss_pred             cCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCccccc
Confidence            99999998876532 348899999999999999999999999999999999995321                      2


Q ss_pred             cccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccc
Q 039276          167 LATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT  234 (263)
Q Consensus       167 ~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (263)
                      .|+..|+||            |||||||++|||++|+.||...... ........         .+..    .   ....
T Consensus       162 ~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~-~~~~~~~~---------~~~~----~---~~~~  224 (285)
T cd05605         162 VGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEK-VKREEVER---------RVKE----D---QEEY  224 (285)
T ss_pred             cCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchh-hHHHHHHH---------Hhhh----c---cccc
Confidence            467889999            9999999999999999998642111 10111100         0000    0   0012


Q ss_pred             hHHHHHHHHHhhccccccCcCCCCC
Q 039276          235 KEQCMSFVFNLAMECTVESPNQRIN  259 (263)
Q Consensus       235 ~~~~~~~l~~l~~~cl~~~p~~Rpt  259 (263)
                      +..+++.+.+++.+||+.||++||+
T Consensus       225 ~~~~~~~~~~li~~~l~~~P~~R~~  249 (285)
T cd05605         225 SEKFSEAARSICRQLLTKDPGFRLG  249 (285)
T ss_pred             CcccCHHHHHHHHHHccCCHHHhcC
Confidence            3345667899999999999999994

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=100.00  E-value=1e-34  Score=238.52  Aligned_cols=214  Identities=20%  Similarity=0.277  Sum_probs=168.2

Q ss_pred             cccccceecccCceEEEEEE-ecCCceEEEEEeecCC---CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEe
Q 039276           33 LFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      .|+..+.||+|++|.||++. ..++..+++|.+....   ......+.+|+.+++.++|+|++++++++.+.+..++++|
T Consensus         3 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e   82 (267)
T cd08229           3 NFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLE   82 (267)
T ss_pred             hhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEE
Confidence            58889999999999999999 4578999999886542   2345677889999999999999999999999899999999


Q ss_pred             ccCCCCHhhhhhh---CCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc--------------------
Q 039276          109 CMPHGSLGKCLST---SNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ--------------------  165 (263)
Q Consensus       109 ~~~~~~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~--------------------  165 (263)
                      ++++++|.+++..   ....+++..++.++.|++.||+|||+++++|+||+|+||+.+.+                    
T Consensus        83 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~  162 (267)
T cd08229          83 LADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA  162 (267)
T ss_pred             ecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCCcc
Confidence            9999999998864   22337889999999999999999999999999999999985421                    


Q ss_pred             ---ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccc
Q 039276          166 ---TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDE  230 (263)
Q Consensus       166 ---~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (263)
                         ..++..|+||            ||||||+++++|++|..||.........+...            +.....     
T Consensus       163 ~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~------------~~~~~~-----  225 (267)
T cd08229         163 AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKK------------IEQCDY-----  225 (267)
T ss_pred             cccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhh------------hhcCCC-----
Confidence               2456778998            99999999999999999985321111111000            000000     


Q ss_pred             cccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          231 HFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       231 ~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .......+++++.+++.+||..+|++|||+.+|
T Consensus       226 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i  258 (267)
T cd08229         226 PPLPSDHYSEELRQLVNMCINPDPEKRPDITYV  258 (267)
T ss_pred             CCCCcccccHHHHHHHHHhcCCCcccCCCHHHH
Confidence            000123466779999999999999999999854

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=100.00  E-value=1.1e-34  Score=236.17  Aligned_cols=206  Identities=23%  Similarity=0.391  Sum_probs=163.4

Q ss_pred             ceecccCceEEEEEEecCCceEEEEEeecCCC-chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccCCCCHh
Q 039276           38 NLISRGGFGSIYKAKIQDGMEVVVKGFNLQYG-GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLG  116 (263)
Q Consensus        38 ~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~  116 (263)
                      ++||+|+||.||+|...++..+++|.+..... .....+.+|+++++.++|+|++++++++...+..+++|||+++++|.
T Consensus         1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   80 (250)
T cd05085           1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL   80 (250)
T ss_pred             CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence            36899999999999977788999999876532 23446788999999999999999999999988999999999999999


Q ss_pred             hhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc------------------------cccccc
Q 039276          117 KCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT------------------------LATISY  172 (263)
Q Consensus       117 ~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~------------------------~g~~~y  172 (263)
                      +++......+++..+..++.|++.+|.|+|.++++|+||+|+||+.....                        .++..|
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y  160 (250)
T cd05085          81 SFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKW  160 (250)
T ss_pred             HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCcccc
Confidence            99876555578899999999999999999999999999999999954321                        123458


Q ss_pred             cCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHHHH
Q 039276          173 MAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCM  239 (263)
Q Consensus       173 ~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (263)
                      +||            ||||||+++|++++ |..||......  .....            +...      .+...+..++
T Consensus       161 ~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~--~~~~~------------~~~~------~~~~~~~~~~  220 (250)
T cd05085         161 TAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ--QAREQ------------VEKG------YRMSCPQKCP  220 (250)
T ss_pred             cCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH--HHHHH------------HHcC------CCCCCCCCCC
Confidence            998            99999999999998 99998532111  00000            0000      0111233456


Q ss_pred             HHHHHhhccccccCcCCCCCccCC
Q 039276          240 SFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       240 ~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ..+.+++.+||+.+|++|||+.||
T Consensus       221 ~~~~~li~~~l~~~p~~Rp~~~~l  244 (250)
T cd05085         221 DDVYKVMQRCWDYKPENRPKFSEL  244 (250)
T ss_pred             HHHHHHHHHHcccCcccCCCHHHH
Confidence            779999999999999999999864

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=100.00  E-value=8.2e-35  Score=245.86  Aligned_cols=206  Identities=16%  Similarity=0.189  Sum_probs=163.2

Q ss_pred             ccccceecccCceEEEEEE-ecCCceEEEEEeecC---CCchHHHHHHHHHHHhhcC-CCcceeEeeEeecCCeeEEEEe
Q 039276           34 FSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQ---YGGAFKNLDVECNMMKIIR-HQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~---~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      |+..+.||+|+||.||++. ..+++.||+|++...   .....+....|..+++.+. |++++++.+.+.+.+..|+|||
T Consensus         2 f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E   81 (323)
T cd05615           2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVME   81 (323)
T ss_pred             ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEc
Confidence            6778999999999999998 456889999999754   2233455677888888885 5778889999988889999999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------  165 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------  165 (263)
                      |+++++|.+++..... +++..+..++.|++.||+|||+++++||||||+||+.+..                       
T Consensus        82 y~~~g~L~~~i~~~~~-l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~~~  160 (323)
T cd05615          82 YVNGGDLMYHIQQVGK-FKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTRT  160 (323)
T ss_pred             CCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCCccccC
Confidence            9999999999876544 8899999999999999999999999999999999985321                       


Q ss_pred             ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccccc
Q 039276          166 TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFM  233 (263)
Q Consensus       166 ~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (263)
                      ..|++.|+||            |||||||++|||++|+.||..... ........            ...        ..
T Consensus       161 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~-~~~~~~i~------------~~~--------~~  219 (323)
T cd05615         161 FCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE-DELFQSIM------------EHN--------VS  219 (323)
T ss_pred             ccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCH-HHHHHHHH------------hCC--------CC
Confidence            1378889999            999999999999999999864211 00011110            000        01


Q ss_pred             chHHHHHHHHHhhccccccCcCCCCCcc
Q 039276          234 TKEQCMSFVFNLAMECTVESPNQRINAK  261 (263)
Q Consensus       234 ~~~~~~~~l~~l~~~cl~~~p~~Rpt~~  261 (263)
                      .+..+++++.+++.+||+.+|++|++..
T Consensus       220 ~p~~~~~~~~~li~~~l~~~p~~R~~~~  247 (323)
T cd05615         220 YPKSLSKEAVSICKGLMTKHPSKRLGCG  247 (323)
T ss_pred             CCccCCHHHHHHHHHHcccCHhhCCCCC
Confidence            1234566789999999999999999863

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=100.00  E-value=8.1e-35  Score=242.34  Aligned_cols=211  Identities=27%  Similarity=0.463  Sum_probs=166.4

Q ss_pred             cccccceecccCceEEEEEEec------CCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEE
Q 039276           33 LFSESNLISRGGFGSIYKAKIQ------DGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALI  106 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~~------~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv  106 (263)
                      +|...+.||+|+||.||++...      ++..+++|.+........+.+.+|+++++.++|+|++++++++......+++
T Consensus         6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   85 (291)
T cd05094           6 DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMV   85 (291)
T ss_pred             HeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEE
Confidence            4788899999999999999732      3456888888766555567788999999999999999999999999999999


Q ss_pred             EeccCCCCHhhhhhhCC---------------CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc------
Q 039276          107 LECMPHGSLGKCLSTSN---------------YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ------  165 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~------  165 (263)
                      |||+++++|.+++....               ..+++..++.++.|++.||+|||+++++|+||||+||+.+..      
T Consensus        86 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~l~  165 (291)
T cd05094          86 FEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIG  165 (291)
T ss_pred             EecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEEC
Confidence            99999999999996532               227888999999999999999999999999999999985422      


Q ss_pred             -------------------ccccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCC
Q 039276          166 -------------------TLATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLP  213 (263)
Q Consensus       166 -------------------~~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~  213 (263)
                                         ..++..|+||            |||||||++|||++ |+.||......+ .+...      
T Consensus       166 dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-~~~~~------  238 (291)
T cd05094         166 DFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE-VIECI------  238 (291)
T ss_pred             CCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHH------
Confidence                               1235669999            99999999999998 999986432111 01000      


Q ss_pred             CchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          214 NSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                             ....      ....+..++.++.+++.+||+.+|++|||+++|
T Consensus       239 -------~~~~------~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v  275 (291)
T cd05094         239 -------TQGR------VLERPRVCPKEVYDIMLGCWQREPQQRLNIKEI  275 (291)
T ss_pred             -------hCCC------CCCCCccCCHHHHHHHHHHcccChhhCcCHHHH
Confidence                   0000      001123345679999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=100.00  E-value=4.9e-35  Score=247.25  Aligned_cols=202  Identities=23%  Similarity=0.242  Sum_probs=158.5

Q ss_pred             ceecccCceEEEEEEe-cCCceEEEEEeecCC---CchHHHHHHHHH-HHhhcCCCcceeEeeEeecCCeeEEEEeccCC
Q 039276           38 NLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY---GGAFKNLDVECN-MMKIIRHQNLIKIISSCSKDDFKALILECMPH  112 (263)
Q Consensus        38 ~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~---~~~~~~~~~e~~-~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~  112 (263)
                      +.||+|+||.||++.. .+++.||+|++....   ......+..|.. +++.++||||+++++.+.+.+..+++|||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence            3689999999999994 568999999997542   223344445544 56778999999999999999999999999999


Q ss_pred             CCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------cccc
Q 039276          113 GSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------TLAT  169 (263)
Q Consensus       113 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------~~g~  169 (263)
                      ++|..++..... +++..+..++.|++.||+|||+++++||||||+||+.+..                       ..|+
T Consensus        81 g~L~~~l~~~~~-~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt  159 (323)
T cd05575          81 GELFFHLQRERS-FPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGT  159 (323)
T ss_pred             CCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccccccCC
Confidence            999999876544 8888999999999999999999999999999999995321                       2478


Q ss_pred             ccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHH
Q 039276          170 ISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQ  237 (263)
Q Consensus       170 ~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (263)
                      +.|+||            |||||||++|||++|+.||.....     .....        .+....        ...+..
T Consensus       160 ~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~-----~~~~~--------~i~~~~--------~~~~~~  218 (323)
T cd05575         160 PEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDT-----AEMYD--------NILNKP--------LRLKPN  218 (323)
T ss_pred             hhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCH-----HHHHH--------HHHcCC--------CCCCCC
Confidence            889999            999999999999999999864211     11100        000000        011234


Q ss_pred             HHHHHHHhhccccccCcCCCCCcc
Q 039276          238 CMSFVFNLAMECTVESPNQRINAK  261 (263)
Q Consensus       238 ~~~~l~~l~~~cl~~~p~~Rpt~~  261 (263)
                      +++++.+++.+||+.||++||++.
T Consensus       219 ~~~~~~~li~~~l~~~p~~R~~~~  242 (323)
T cd05575         219 ISVSARHLLEGLLQKDRTKRLGAK  242 (323)
T ss_pred             CCHHHHHHHHHHhhcCHHhCCCCC
Confidence            466799999999999999999985

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=1.4e-34  Score=237.80  Aligned_cols=209  Identities=22%  Similarity=0.326  Sum_probs=166.2

Q ss_pred             ccccceecccCceEEEEEEe-cCCceEEEEEeecCCCc---------hHHHHHHHHHHHhhcCCCcceeEeeEeecCCee
Q 039276           34 FSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGG---------AFKNLDVECNMMKIIRHQNLIKIISSCSKDDFK  103 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~---------~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~  103 (263)
                      |.....||+|++|.||+|.. .++..+++|.+......         ..+.+.+|+.+++.++|+|++++++++.+.+..
T Consensus         2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   81 (267)
T cd06628           2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL   81 (267)
T ss_pred             ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence            67788999999999999984 45889999988654322         124577899999999999999999999999999


Q ss_pred             EEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc-----------------
Q 039276          104 ALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT-----------------  166 (263)
Q Consensus       104 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~-----------------  166 (263)
                      ++++||+++++|.+++..... ++...+..++.|++.||+|||+.+++|+||+|+||+.+...                 
T Consensus        82 ~lv~e~~~~~~L~~~l~~~~~-l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~  160 (267)
T cd06628          82 NIFLEYVPGGSVAALLNNYGA-FEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANS  160 (267)
T ss_pred             EEEEEecCCCCHHHHHHhccC-ccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCccccccc
Confidence            999999999999999976543 78888999999999999999999999999999999953211                 


Q ss_pred             ------------cccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhh
Q 039276          167 ------------LATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSA  222 (263)
Q Consensus       167 ------------~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (263)
                                  .|+..|+||            |||||||++++|++|+.||.....    ......         ... 
T Consensus       161 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~~~~---------~~~-  226 (267)
T cd06628         161 LSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQ----LQAIFK---------IGE-  226 (267)
T ss_pred             ccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccH----HHHHHH---------Hhc-
Confidence                        256678888            999999999999999999864211    111100         000 


Q ss_pred             cccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          223 NLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                            ......+..+++++.+++.+||+.+|.+||++.||
T Consensus       227 ------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i  261 (267)
T cd06628         227 ------NASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAEL  261 (267)
T ss_pred             ------cCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHH
Confidence                  00111233456779999999999999999999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=100.00  E-value=1.5e-34  Score=241.32  Aligned_cols=212  Identities=23%  Similarity=0.324  Sum_probs=171.3

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      .+|+..+.||.|++|.||++. ..+++.|++|.+........+.+.+|+.+++.++|+|++++++.+...+..++++||+
T Consensus        19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   98 (296)
T cd06655          19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL   98 (296)
T ss_pred             ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence            459999999999999999998 4568999999998766556677889999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------cc
Q 039276          111 PHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------TL  167 (263)
Q Consensus       111 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------~~  167 (263)
                      ++++|..++...  .+++.++..++.+++.||+|||+.+++|+||+|+||+.+..                       ..
T Consensus        99 ~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~  176 (296)
T cd06655          99 AGGSLTDVVTET--CMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRSTMV  176 (296)
T ss_pred             CCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhcccccccCCCcC
Confidence            999999988654  37899999999999999999999999999999999995421                       13


Q ss_pred             ccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccch
Q 039276          168 ATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTK  235 (263)
Q Consensus       168 g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (263)
                      ++..|+||            |||||||++|+|++|+.||........ ......                 ........+
T Consensus       177 ~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~-~~~~~~-----------------~~~~~~~~~  238 (296)
T cd06655         177 GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-LYLIAT-----------------NGTPELQNP  238 (296)
T ss_pred             CCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHh-----------------cCCcccCCc
Confidence            56679999            999999999999999999864211100 000000                 000001123


Q ss_pred             HHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          236 EQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       236 ~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ..+++.+.+++.+||..+|++|||+.+|
T Consensus       239 ~~~~~~~~~li~~~l~~dp~~Rpt~~~i  266 (296)
T cd06655         239 EKLSPIFRDFLNRCLEMDVEKRGSAKEL  266 (296)
T ss_pred             ccCCHHHHHHHHHHhhcChhhCCCHHHH
Confidence            3456679999999999999999998764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=100.00  E-value=1.7e-34  Score=237.45  Aligned_cols=212  Identities=22%  Similarity=0.380  Sum_probs=168.3

Q ss_pred             ccccceecccCceEEEEEE-ecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccCC
Q 039276           34 FSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPH  112 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~  112 (263)
                      +.....||+|+||.||+|. ..++..|++|.+........+.+.+|+++++.++|+||+++++++..++..++++||+++
T Consensus        10 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~   89 (268)
T cd06624          10 NGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPG   89 (268)
T ss_pred             CCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCC
Confidence            4455689999999999998 456788999998877656667888999999999999999999999999999999999999


Q ss_pred             CCHhhhhhhCCCcc--cHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc------------------------c
Q 039276          113 GSLGKCLSTSNYIL--DFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ------------------------T  166 (263)
Q Consensus       113 ~~L~~~l~~~~~~~--~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~------------------------~  166 (263)
                      ++|.+++......+  +...+..++.|++.||+|||.++++|+||+|+||+.+..                        .
T Consensus        90 ~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~  169 (268)
T cd06624          90 GSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCTETF  169 (268)
T ss_pred             CCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccCCCccccC
Confidence            99999997643334  778888999999999999999999999999999996421                        1


Q ss_pred             cccccccCc--------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccc
Q 039276          167 LATISYMAP--------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHF  232 (263)
Q Consensus       167 ~g~~~y~aP--------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (263)
                      .|+..|+||              ||||||+++++|++|+.||..........  +.             .....   ...
T Consensus       170 ~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~--~~-------------~~~~~---~~~  231 (268)
T cd06624         170 TGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAM--FK-------------VGMFK---IHP  231 (268)
T ss_pred             CCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhH--hh-------------hhhhc---cCC
Confidence            356678888              99999999999999999986421111000  00             00000   001


Q ss_pred             cchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          233 MTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       233 ~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ..+..+++++.+++.+||+.+|++|||+.||
T Consensus       232 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l  262 (268)
T cd06624         232 EIPESLSAEAKNFILRCFEPDPDKRASAHDL  262 (268)
T ss_pred             CCCcccCHHHHHHHHHHcCCCchhCCCHHHH
Confidence            1234566779999999999999999999874

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=100.00  E-value=8.3e-35  Score=241.26  Aligned_cols=230  Identities=20%  Similarity=0.212  Sum_probs=168.6

Q ss_pred             cccccceecccCceEEEEEEe-cCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           33 LFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      +|+..+.||+|++|.||++.. .+|..+++|.+....  ......+.+|+++++.++|+|++++++++.+....++++||
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY   80 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence            378889999999999999994 468899999997542  22335567899999999999999999999999999999999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------c
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------T  166 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------~  166 (263)
                      +++ +|.+++......+++..++.++.|++.||.|||.++++|+||+|+||+.+..                       .
T Consensus        81 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~  159 (284)
T cd07839          81 CDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSAE  159 (284)
T ss_pred             CCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcCCC
Confidence            975 8888877655558999999999999999999999999999999999985421                       1


Q ss_pred             cccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhh--h----hhccccc
Q 039276          167 LATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKV--V----SANLLSR  227 (263)
Q Consensus       167 ~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~  227 (263)
                      .++..|+||             |||||||++++|++|..|+.........+...............  .    +......
T Consensus       160 ~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (284)
T cd07839         160 VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPM  239 (284)
T ss_pred             ccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCC
Confidence            346779999             99999999999999999965332222222221111111000000  0    0000000


Q ss_pred             cccc---ccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          228 EDEH---FMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       228 ~~~~---~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ....   ......+++++.+++.+||+.||.+|||++++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~i  278 (284)
T cd07839         240 YPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEA  278 (284)
T ss_pred             CCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHH
Confidence            0000   01123467789999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=100.00  E-value=7.3e-35  Score=241.34  Aligned_cols=211  Identities=24%  Similarity=0.436  Sum_probs=167.0

Q ss_pred             cccccceecccCceEEEEEEec------CCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEE
Q 039276           33 LFSESNLISRGGFGSIYKAKIQ------DGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALI  106 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~~------~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv  106 (263)
                      +|+....||+|+||.||++...      ++..+++|.+..........+.+|+++++.++|+||+++++++.+....+++
T Consensus         6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   85 (280)
T cd05092           6 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMV   85 (280)
T ss_pred             hceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEEE
Confidence            4888999999999999998632      3567889988766555667888999999999999999999999988899999


Q ss_pred             EeccCCCCHhhhhhhCC--------------CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc------
Q 039276          107 LECMPHGSLGKCLSTSN--------------YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT------  166 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~~~--------------~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~------  166 (263)
                      +||+++++|.+++....              ..+++..+..++.|++.|++|||+++++|+||||+||+.....      
T Consensus        86 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~kL~d  165 (280)
T cd05092          86 FEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVVKIGD  165 (280)
T ss_pred             EecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCCEEECC
Confidence            99999999999987542              2367888999999999999999999999999999999954321      


Q ss_pred             -------------------cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCC
Q 039276          167 -------------------LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPN  214 (263)
Q Consensus       167 -------------------~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~  214 (263)
                                         .+++.|+||            |||||||++|||++ |+.||......+ ..          
T Consensus       166 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-~~----------  234 (280)
T cd05092         166 FGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTE-AI----------  234 (280)
T ss_pred             CCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHH-HH----------
Confidence                               124569999            99999999999998 999985321110 00          


Q ss_pred             chhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          215 SVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                         .....      ......+..+++.+.+++.+||+.||++||++.+|
T Consensus       235 ---~~~~~------~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l  274 (280)
T cd05092         235 ---ECITQ------GRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDI  274 (280)
T ss_pred             ---HHHHc------CccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHH
Confidence               00000      00111233556779999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=100.00  E-value=8.9e-35  Score=245.66  Aligned_cols=206  Identities=16%  Similarity=0.193  Sum_probs=162.9

Q ss_pred             cccccceecccCceEEEEEEe-cCCceEEEEEeecCC---CchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCeeEEEE
Q 039276           33 LFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY---GGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      +|+..+.||+|+||.||+|.. .++..||+|++....   .........|..++..+ +|++++++.+.+.+.+..++||
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM   80 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence            378889999999999999984 457899999997542   22334556677777776 5899999999999999999999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc----------------------
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ----------------------  165 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~----------------------  165 (263)
                      ||+++|+|.+++..... +++..+..++.|++.||+|||+++++||||||+||+.+..                      
T Consensus        81 E~~~~g~L~~~~~~~~~-~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~~~  159 (323)
T cd05616          81 EYVNGGDLMYQIQQVGR-FKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTK  159 (323)
T ss_pred             cCCCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCCCccc
Confidence            99999999999876544 8889999999999999999999999999999999985321                      


Q ss_pred             -ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccc
Q 039276          166 -TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHF  232 (263)
Q Consensus       166 -~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (263)
                       ..|++.|+||            |||||||++|||++|+.||..... ...+.....            ..        .
T Consensus       160 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~-~~~~~~i~~------------~~--------~  218 (323)
T cd05616         160 TFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-DELFQSIME------------HN--------V  218 (323)
T ss_pred             cCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCH-HHHHHHHHh------------CC--------C
Confidence             2468889999            999999999999999999864211 011111100            00        0


Q ss_pred             cchHHHHHHHHHhhccccccCcCCCCCc
Q 039276          233 MTKEQCMSFVFNLAMECTVESPNQRINA  260 (263)
Q Consensus       233 ~~~~~~~~~l~~l~~~cl~~~p~~Rpt~  260 (263)
                      ..+..+++++.+++.+|++.+|++|++.
T Consensus       219 ~~p~~~s~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05616         219 AYPKSMSKEAVAICKGLMTKHPGKRLGC  246 (323)
T ss_pred             CCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence            1133456779999999999999999986

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=100.00  E-value=1.5e-34  Score=247.69  Aligned_cols=229  Identities=20%  Similarity=0.190  Sum_probs=164.7

Q ss_pred             ccccccccceecccCceEEEEEEe-cCCceEEEEEeecC--CCchHHHHHHHHHHHhhcCCCcceeEeeEeecC------
Q 039276           30 GLFLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQ--YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKD------  100 (263)
Q Consensus        30 ~~~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~------  100 (263)
                      ...+|+..+.||+|+||.||++.. .++..||+|.+...  .......+.+|+.+++.++|+||+++++++...      
T Consensus        19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   98 (359)
T cd07876          19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF   98 (359)
T ss_pred             hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence            346799999999999999999984 56899999999654  233456677899999999999999999988543      


Q ss_pred             CeeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc---------------
Q 039276          101 DFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ---------------  165 (263)
Q Consensus       101 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~---------------  165 (263)
                      ...|++|||+.+ ++.+.+..   .++...+..++.|++.||+|||+++++||||||+||+.+..               
T Consensus        99 ~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~  174 (359)
T cd07876          99 QDVYLVMELMDA-NLCQVIHM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAC  174 (359)
T ss_pred             ceeEEEEeCCCc-CHHHHHhc---cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCccccc
Confidence            247999999976 67666643   27888889999999999999999999999999999995432               


Q ss_pred             -------ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCch------hhhh
Q 039276          166 -------TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSV------MKVV  220 (263)
Q Consensus       166 -------~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~------~~~~  220 (263)
                             ..|+..|+||            |||||||++|+|++|+.||...... ..+............      ....
T Consensus       175 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  253 (359)
T cd07876         175 TNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHI-DQWNKVIEQLGTPSAEFMNRLQPTV  253 (359)
T ss_pred             cCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCcHHHHHHHHHHH
Confidence                   2467889999            9999999999999999999743211 111111111110000      0000


Q ss_pred             hhcccccc----------------cccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          221 SANLLSRE----------------DEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       221 ~~~~~~~~----------------~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ........                +.........++++.+++.+||+.||++|||+.|+
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~  312 (359)
T cd07876         254 RNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEA  312 (359)
T ss_pred             HHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHH
Confidence            00000000                00000112345678999999999999999999874

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=100.00  E-value=2.1e-34  Score=241.78  Aligned_cols=226  Identities=17%  Similarity=0.218  Sum_probs=169.7

Q ss_pred             cccccceecccCceEEEEEEe-cCCceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           33 LFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      +|+..+.||+|+||.||++.. .++..+++|.+.... ......+.+|+++++.++|+||+++++.+.+.+..++++||+
T Consensus         2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~   81 (308)
T cd06615           2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHM   81 (308)
T ss_pred             CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeecc
Confidence            488899999999999999984 457888999887552 233456788999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhcc-CCccccccCCCccccccc---------------------ccc
Q 039276          111 PHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHF-GHSTHLLLKEDQSLTQIQ---------------------TLA  168 (263)
Q Consensus       111 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~-~~i~h~dlk~~nil~~~~---------------------~~g  168 (263)
                      ++++|.+++..... +++..+..++.|++.||.|||+ .+++|+||+|+||+.+.+                     ..+
T Consensus        82 ~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~  160 (308)
T cd06615          82 DGGSLDQVLKKAGR-IPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVG  160 (308)
T ss_pred             CCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCcccccccccccCCC
Confidence            99999999976543 7888999999999999999997 589999999999996432                     135


Q ss_pred             cccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCC---------------------c
Q 039276          169 TISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPN---------------------S  215 (263)
Q Consensus       169 ~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~---------------------~  215 (263)
                      +..|+||            |||||||++++|++|+.||....  ......+.......                     .
T Consensus       161 ~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (308)
T cd06615         161 TRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPD--AKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMA  238 (308)
T ss_pred             CcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcc--hhhHHHhhcCccccccccCCcccccCCCCCccchhh
Confidence            7789999            99999999999999999986432  11111111110000                     0


Q ss_pred             hhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          216 VMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .....+.......+ .. ....++.++.+++.+||..+|++|||+.+|
T Consensus       239 ~~~~~~~~~~~~~~-~~-~~~~~~~~~~~li~~~l~~~P~~Rpt~~~l  284 (308)
T cd06615         239 IFELLDYIVNEPPP-KL-PSGAFSDEFQDFVDKCLKKNPKERADLKEL  284 (308)
T ss_pred             HHHHHHHHhcCCCc-cC-cCcccCHHHHHHHHHHccCChhhCcCHHHH
Confidence            00000000000000 00 011356779999999999999999999875

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=100.00  E-value=2.5e-34  Score=236.06  Aligned_cols=211  Identities=19%  Similarity=0.339  Sum_probs=167.8

Q ss_pred             ccccceecccCceEEEEEEecCCceEEEEEeecCCC------chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           34 FSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYG------GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~------~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      |...+.||+|+||.||+|...+++.+++|.+.....      .....+.+|+++++.++|+|++++.+++.+.+..++++
T Consensus         2 ~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   81 (265)
T cd06631           2 WTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFM   81 (265)
T ss_pred             ccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEE
Confidence            778899999999999999977789999999875421      12355778999999999999999999999999999999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc----------------------
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ----------------------  165 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~----------------------  165 (263)
                      ||+++++|.+++..... +++..+..++.|++.||+|||+.+++|+||+|+||+....                      
T Consensus        82 e~~~~~~L~~~l~~~~~-~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~  160 (265)
T cd06631          82 EFVPGGSISSILNRFGP-LPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGT  160 (265)
T ss_pred             ecCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhcccccc
Confidence            99999999999976543 7888899999999999999999999999999999995421                      


Q ss_pred             -------ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccc
Q 039276          166 -------TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLS  226 (263)
Q Consensus       166 -------~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (263)
                             ..++..|+||            |||||||++++|++|+.||.....    .........         .    
T Consensus       161 ~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~----~~~~~~~~~---------~----  223 (265)
T cd06631         161 HSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDR----LAAMFYIGA---------H----  223 (265)
T ss_pred             ccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCCh----HHHHHHhhh---------c----
Confidence                   1356678888            999999999999999999864211    111100000         0    


Q ss_pred             cccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          227 REDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       227 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                       .......+..++.++.+++.+||+.+|++|||+.++
T Consensus       224 -~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~  259 (265)
T cd06631         224 -RGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQL  259 (265)
T ss_pred             -cCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHH
Confidence             000011233456678999999999999999999874

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=100.00  E-value=1.2e-34  Score=240.25  Aligned_cols=229  Identities=18%  Similarity=0.197  Sum_probs=167.1

Q ss_pred             cccccceecccCceEEEEEEe-cCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           33 LFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      +|+..+.||+|++|.||+|.. .++..|++|.+....  ......+.+|+.+++.++|+|++++++.+.+++..++++||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF   80 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence            377889999999999999994 468999999986542  22346678899999999999999999999999999999999


Q ss_pred             cCCCCHhhhhhhCC--CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc---------------------
Q 039276          110 MPHGSLGKCLSTSN--YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT---------------------  166 (263)
Q Consensus       110 ~~~~~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~---------------------  166 (263)
                      ++ ++|.+++....  ..+++..+..++.|++.||+|||+++++|+||+|+||+...++                     
T Consensus        81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~  159 (285)
T cd07861          81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYT  159 (285)
T ss_pred             CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCccccc
Confidence            97 58888886532  3488999999999999999999999999999999999854321                     


Q ss_pred             --cccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCC---c-----hhhhhhhc
Q 039276          167 --LATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPN---S-----VMKVVSAN  223 (263)
Q Consensus       167 --~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~---~-----~~~~~~~~  223 (263)
                        .++..|+||             |||||||++++|++|+.||......+... .........   .     ........
T Consensus       160 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (285)
T cd07861         160 HEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLF-RIFRILGTPTEDVWPGVTSLPDYKNT  238 (285)
T ss_pred             CCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH-HHHHHhCCCChhhhhcchhhHHHHhh
Confidence              346778999             99999999999999999986421111100 000000000   0     00000000


Q ss_pred             ccc-cccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          224 LLS-REDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       224 ~~~-~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ... ...........+++++.+++.+||+.||++|||+.+|
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~l  279 (285)
T cd07861         239 FPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKA  279 (285)
T ss_pred             ccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHH
Confidence            000 0000000122367788999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=100.00  E-value=2e-34  Score=239.71  Aligned_cols=229  Identities=19%  Similarity=0.258  Sum_probs=161.8

Q ss_pred             cccccceecccCceEEEEEEe-c-CCceEEEEEeecCCC--chHHHHHHHHHHHhhc---CCCcceeEeeEee-----cC
Q 039276           33 LFSESNLISRGGFGSIYKAKI-Q-DGMEVVVKGFNLQYG--GAFKNLDVECNMMKII---RHQNLIKIISSCS-----KD  100 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~-~-~~~~v~vK~~~~~~~--~~~~~~~~e~~~l~~~---~h~~i~~~~~~~~-----~~  100 (263)
                      +|+..+.||+|+||.||+|.. . +++.||+|.+.....  .......+|+++++.+   +||||+++++++.     ..
T Consensus         2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~   81 (290)
T cd07862           2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE   81 (290)
T ss_pred             CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence            488899999999999999984 3 467899999876532  2334556677777665   6999999999875     23


Q ss_pred             CeeEEEEeccCCCCHhhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc--------------
Q 039276          101 DFKALILECMPHGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ--------------  165 (263)
Q Consensus       101 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~--------------  165 (263)
                      ...++++|+++ ++|.+++.... ..+++..+..++.|++.||+|||+++++|+||||+||+.+..              
T Consensus        82 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~  160 (290)
T cd07862          82 TKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY  160 (290)
T ss_pred             CcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceEec
Confidence            56899999996 59999887533 337889999999999999999999999999999999995421              


Q ss_pred             --------ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcC---CCchhh---h
Q 039276          166 --------TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLL---PNSVMK---V  219 (263)
Q Consensus       166 --------~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~---~~~~~~---~  219 (263)
                              ..|+..|+||            |||||||++|||++|+.||...... ..+........   +.....   .
T Consensus       161 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~  239 (290)
T cd07862         161 SFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV-DQLGKILDVIGLPGEEDWPRDVAL  239 (290)
T ss_pred             cCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHH-HHHHHHHHHhCCCChhhchhhhcc
Confidence                    2467889999            9999999999999999998743211 11111111110   000000   0


Q ss_pred             hhhccccccccc-ccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          220 VSANLLSREDEH-FMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       220 ~~~~~~~~~~~~-~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ............ ......+++.+.+++.+||+.||++|||+.|+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~  284 (290)
T cd07862         240 PRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA  284 (290)
T ss_pred             cchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHH
Confidence            000000000000 00112456678999999999999999999764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=100.00  E-value=2.5e-34  Score=234.68  Aligned_cols=212  Identities=21%  Similarity=0.315  Sum_probs=171.8

Q ss_pred             ccccccceecccCceEEEEEEec-CCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ-DGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~-~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      +.|+..+.+|+|++|.||++... +++.+++|.+.....  .+.+.+|+++++.++|+|++++++.+.+....++++|++
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~   80 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC   80 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence            45899999999999999999965 478999999876532  678889999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------cc
Q 039276          111 PHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------TL  167 (263)
Q Consensus       111 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------~~  167 (263)
                      ++++|.+++......+++..+..++.|++.||.|||+.+++|+|++|+||+.+..                       ..
T Consensus        81 ~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~  160 (256)
T cd06612          81 GAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVI  160 (256)
T ss_pred             CCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCcccccccc
Confidence            9999999997655568999999999999999999999999999999999985432                       12


Q ss_pred             ccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccch
Q 039276          168 ATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTK  235 (263)
Q Consensus       168 g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (263)
                      ++..|+||            ||||||+++++|++|+.||..........    .          ...    ........+
T Consensus       161 ~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~----~----------~~~----~~~~~~~~~  222 (256)
T cd06612         161 GTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIF----M----------IPN----KPPPTLSDP  222 (256)
T ss_pred             CCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhh----h----------hcc----CCCCCCCch
Confidence            56679999            99999999999999999986432111100    0          000    000111123


Q ss_pred             HHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          236 EQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       236 ~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ..++.++.+++.+||+.+|++|||++||
T Consensus       223 ~~~~~~~~~~i~~~l~~~P~~Rps~~~i  250 (256)
T cd06612         223 EKWSPEFNDFVKKCLVKDPEERPSAIQL  250 (256)
T ss_pred             hhcCHHHHHHHHHHHhcChhhCcCHHHH
Confidence            4456679999999999999999999874

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=2e-35  Score=241.85  Aligned_cols=204  Identities=21%  Similarity=0.294  Sum_probs=159.4

Q ss_pred             ceecccCceEEEEEEec-C-------CceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           38 NLISRGGFGSIYKAKIQ-D-------GMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        38 ~~lg~g~~g~v~~~~~~-~-------~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      +.||+|+||.||+|... .       ..++++|.+........+.+.+|+.+++.++|+|++++++++......+++|||
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   80 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY   80 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence            36899999999999743 2       234888887665545566788899999999999999999999988889999999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc------------------------
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ------------------------  165 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~------------------------  165 (263)
                      +++|+|..++......+++..+..++.|++.||+|||+++++|+||||+||+....                        
T Consensus        81 ~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~  160 (258)
T cd05078          81 VKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLP  160 (258)
T ss_pred             CCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccccccCC
Confidence            99999999998765558889999999999999999999999999999999997432                        


Q ss_pred             ---ccccccccCc-------------chhhHHHHHHHHHhCC-CCCccccCCCchhhhHhhhcCCCchhhhhhhcccccc
Q 039276          166 ---TLATISYMAP-------------DTYNFGIMIMETFSGK-KPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSRE  228 (263)
Q Consensus       166 ---~~g~~~y~aP-------------Dv~SlG~il~ell~g~-~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (263)
                         ..++..|+||             |||||||++|||++|. .||...... ...             .....      
T Consensus       161 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~-~~~-------------~~~~~------  220 (258)
T cd05078         161 KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQ-KKL-------------QFYED------  220 (258)
T ss_pred             chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHH-HHH-------------HHHHc------
Confidence               1346678888             9999999999999985 554321100 000             00000      


Q ss_pred             cccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          229 DEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       229 ~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                        +...+...+.++.+++.+||+.+|++|||+++|
T Consensus       221 --~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~i  253 (258)
T cd05078         221 --RHQLPAPKWTELANLINQCMDYEPDFRPSFRAI  253 (258)
T ss_pred             --cccCCCCCcHHHHHHHHHHhccChhhCCCHHHH
Confidence              001122334568999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=1.3e-34  Score=240.14  Aligned_cols=222  Identities=20%  Similarity=0.288  Sum_probs=165.3

Q ss_pred             ccccceecccCceEEEEEEe-----cCCceEEEEEeecCCC-chHHHHHHHHHHHhhcCCCcceeEeeEeecC--CeeEE
Q 039276           34 FSESNLISRGGFGSIYKAKI-----QDGMEVVVKGFNLQYG-GAFKNLDVECNMMKIIRHQNLIKIISSCSKD--DFKAL  105 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~-----~~~~~v~vK~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~--~~~~l  105 (263)
                      |...+.||+|+||.||++..     .++..|++|.+..... .....+.+|+++++.++|+|++++++++...  ...++
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (283)
T cd05080           6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL   85 (283)
T ss_pred             ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence            48889999999999988652     3477899999876532 3456778899999999999999999987653  46889


Q ss_pred             EEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc-------------------
Q 039276          106 ILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT-------------------  166 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~-------------------  166 (263)
                      +|||+++++|.+++....  +++.++..++.|++.||.|||+++++|+||||+||+.+...                   
T Consensus        86 v~e~~~~~~l~~~~~~~~--l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~  163 (283)
T cd05080          86 IMEYVPLGSLRDYLPKHK--LNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEY  163 (283)
T ss_pred             EecCCCCCCHHHHHHHcC--CCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccCCcchh
Confidence            999999999999997643  89999999999999999999999999999999999954321                   


Q ss_pred             -------cccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhh-hcCCCchhhhhhhcccc
Q 039276          167 -------LATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVN-DLLPNSVMKVVSANLLS  226 (263)
Q Consensus       167 -------~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  226 (263)
                             .++..|+||            ||||||++++||++|..||......-........ ..............   
T Consensus       164 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  240 (283)
T cd05080         164 YRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERG---  240 (283)
T ss_pred             hccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcC---
Confidence                   223458888            9999999999999999998643221111100000 00001111111111   


Q ss_pred             cccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          227 REDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       227 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                         ...+.+..++.++.+++.+||+.+|++|||+++|
T Consensus       241 ---~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i  274 (283)
T cd05080         241 ---MRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSL  274 (283)
T ss_pred             ---CCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHH
Confidence               1112344567789999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=100.00  E-value=2.2e-34  Score=235.23  Aligned_cols=206  Identities=26%  Similarity=0.442  Sum_probs=167.1

Q ss_pred             ceecccCceEEEEEEec-C---CceEEEEEeecCCCc-hHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccCC
Q 039276           38 NLISRGGFGSIYKAKIQ-D---GMEVVVKGFNLQYGG-AFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPH  112 (263)
Q Consensus        38 ~~lg~g~~g~v~~~~~~-~---~~~v~vK~~~~~~~~-~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~  112 (263)
                      +.||+|+||.||++... .   +..+++|.+...... ..+.+.+|++.++.++|+|++++++++.+....++++||+++
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG   80 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence            46899999999999954 3   788999999876443 367788999999999999999999999998899999999999


Q ss_pred             CCHhhhhhhC--------CCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-------------------
Q 039276          113 GSLGKCLSTS--------NYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-------------------  165 (263)
Q Consensus       113 ~~L~~~l~~~--------~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-------------------  165 (263)
                      ++|.+++...        ...+++..++.++.|++.||+|||+++++|+||+|+||+.+..                   
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~  160 (262)
T cd00192          81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDY  160 (262)
T ss_pred             CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccccccccccc
Confidence            9999999875        3458999999999999999999999999999999999995441                   


Q ss_pred             ------ccccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccc
Q 039276          166 ------TLATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLS  226 (263)
Q Consensus       166 ------~~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (263)
                            ..++..|+||            |||||||+++||++ |..||.....  ..+.....            .    
T Consensus       161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~~~~~------------~----  222 (262)
T cd00192         161 YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN--EEVLEYLR------------K----  222 (262)
T ss_pred             cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH--HHHHHHHH------------c----
Confidence                  2346679999            99999999999999 6999865311  11111000            0    


Q ss_pred             cccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          227 REDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       227 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                        ..+...+..+++++.+++.+||+.+|++|||+.|+
T Consensus       223 --~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l  257 (262)
T cd00192         223 --GYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSEL  257 (262)
T ss_pred             --CCCCCCCccCChHHHHHHHHHccCCcccCcCHHHH
Confidence              11122344557789999999999999999999874

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=100.00  E-value=8.4e-35  Score=249.93  Aligned_cols=213  Identities=17%  Similarity=0.207  Sum_probs=165.5

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecC---CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQ---YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      .+|+..+.||+|+||.||++.. .+++.+|+|.+...   .......+.+|+.+++.++||||+++++.+.+....++||
T Consensus        43 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~  122 (370)
T cd05621          43 EDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVM  122 (370)
T ss_pred             HHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            5699999999999999999994 45889999998653   2233455778999999999999999999999999999999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-----------------------
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-----------------------  164 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-----------------------  164 (263)
                      ||+++|+|.+++...  .+++..+..++.|++.||+|||+++++||||||+||+.+.                       
T Consensus       123 Ey~~gg~L~~~l~~~--~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~  200 (370)
T cd05621         123 EYMPGGDLVNLMSNY--DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVRC  200 (370)
T ss_pred             cCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccCCceec
Confidence            999999999999654  3788889999999999999999999999999999999532                       


Q ss_pred             -cccccccccCc----------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccc
Q 039276          165 -QTLATISYMAP----------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSR  227 (263)
Q Consensus       165 -~~~g~~~y~aP----------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (263)
                       ...||+.|+||                |||||||++|||++|+.||..... ...+.            .+....    
T Consensus       201 ~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~-~~~~~------------~i~~~~----  263 (370)
T cd05621         201 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSL-VGTYS------------KIMDHK----  263 (370)
T ss_pred             ccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCH-HHHHH------------HHHhCC----
Confidence             12478899999                999999999999999999863211 00111            111100    


Q ss_pred             ccccccchHHHHHHHHHhhccccccCcC--CCCCccCC
Q 039276          228 EDEHFMTKEQCMSFVFNLAMECTVESPN--QRINAKEM  263 (263)
Q Consensus       228 ~~~~~~~~~~~~~~l~~l~~~cl~~~p~--~Rpt~~ev  263 (263)
                      .....+....++..+.+++.+|+..++.  +|+|+.|+
T Consensus       264 ~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~  301 (370)
T cd05621         264 NSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEI  301 (370)
T ss_pred             cccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHH
Confidence            0011122234567789999999975443  37787653

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=100.00  E-value=2.3e-34  Score=240.41  Aligned_cols=212  Identities=23%  Similarity=0.314  Sum_probs=170.2

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      .+|...+.||+|++|.||++. ..+++.|++|.+..........+.+|+.+++.++|+|++++++.+...+..++++||+
T Consensus        19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~   98 (297)
T cd06656          19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   98 (297)
T ss_pred             hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeeccc
Confidence            469999999999999999999 4579999999998765555677888999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------cc
Q 039276          111 PHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------TL  167 (263)
Q Consensus       111 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------~~  167 (263)
                      ++++|.+++...  .+++.++..++.|++.||.|||+.+++|+||+|+||+.+..                       ..
T Consensus        99 ~~~~L~~~~~~~--~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~  176 (297)
T cd06656          99 AGGSLTDVVTET--CMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV  176 (297)
T ss_pred             CCCCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCccCcCccc
Confidence            999999998653  37888999999999999999999999999999999995321                       23


Q ss_pred             ccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccch
Q 039276          168 ATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTK  235 (263)
Q Consensus       168 g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (263)
                      +++.|+||            |||||||++|+|++|+.||...........             ..     .........+
T Consensus       177 ~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~-------------~~-----~~~~~~~~~~  238 (297)
T cd06656         177 GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL-------------IA-----TNGTPELQNP  238 (297)
T ss_pred             CCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheee-------------ec-----cCCCCCCCCc
Confidence            56678888            999999999999999999854211110000             00     0000000113


Q ss_pred             HHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          236 EQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       236 ~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ...+..+.+++.+||+.+|++|||+++|
T Consensus       239 ~~~~~~~~~li~~~l~~~p~~Rps~~~i  266 (297)
T cd06656         239 ERLSAVFRDFLNRCLEMDVDRRGSAKEL  266 (297)
T ss_pred             cccCHHHHHHHHHHccCChhhCcCHHHH
Confidence            3455668999999999999999999875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=100.00  E-value=2.6e-34  Score=235.39  Aligned_cols=210  Identities=20%  Similarity=0.309  Sum_probs=166.0

Q ss_pred             ccccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccC
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMP  111 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~  111 (263)
                      ++|+..+.||+|++|.||++...++..+++|.+..... ..+.+.+|+.++++++|++++++++++.. ...+++|||++
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~~   83 (260)
T cd05070           6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVSE-EPIYIVTEYMS   83 (260)
T ss_pred             HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEECC-CCcEEEEEecC
Confidence            46899999999999999999977788899999876533 34568899999999999999999998754 46799999999


Q ss_pred             CCCHhhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc------------------------
Q 039276          112 HGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT------------------------  166 (263)
Q Consensus       112 ~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~------------------------  166 (263)
                      +++|.+++.... ..+++..+..++.+++.||+|||+.+++|+||+|+||+.....                        
T Consensus        84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~  163 (260)
T cd05070          84 KGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGA  163 (260)
T ss_pred             CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCcccccccCC
Confidence            999999987542 3378899999999999999999999999999999999854321                        


Q ss_pred             cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccccc
Q 039276          167 LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFM  233 (263)
Q Consensus       167 ~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (263)
                      .++..|+||            ||||||+++++|++ |..||...... .... .+.            ..      ...+
T Consensus       164 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~-~~~~-~~~------------~~------~~~~  223 (260)
T cd05070         164 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR-EVLE-QVE------------RG------YRMP  223 (260)
T ss_pred             CCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH-HHHH-HHH------------cC------CCCC
Confidence            123469999            99999999999999 89998642111 1111 110            00      0112


Q ss_pred             chHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          234 TKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       234 ~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .+...+.++.+++.+|+..+|++|||+.++
T Consensus       224 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l  253 (260)
T cd05070         224 CPQDCPISLHELMLQCWKKDPEERPTFEYL  253 (260)
T ss_pred             CCCcCCHHHHHHHHHHcccCcccCcCHHHH
Confidence            234556679999999999999999999764

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=2.1e-34  Score=238.89  Aligned_cols=226  Identities=21%  Similarity=0.338  Sum_probs=167.8

Q ss_pred             ccccccceecccCceEEEEEEe-----cCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeec--CCeeE
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-----QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSK--DDFKA  104 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-----~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~  104 (263)
                      .+|+..+.||+|+||.||++..     .++..|++|.+........+.+.+|+++++.++|+|++++.+++..  ....+
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   83 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR   83 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence            3588899999999999999873     2478899999877655556778899999999999999999997743  34689


Q ss_pred             EEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc------------------
Q 039276          105 LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT------------------  166 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~------------------  166 (263)
                      +++||+++++|.+++......+++..+..++.|++.||+|||+++++|+||||+||+.+...                  
T Consensus        84 lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~  163 (284)
T cd05081          84 LVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKE  163 (284)
T ss_pred             EEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccccccCCCc
Confidence            99999999999999976544588999999999999999999999999999999999954321                  


Q ss_pred             --------cccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCC--Cchhhhhhhcc
Q 039276          167 --------LATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLP--NSVMKVVSANL  224 (263)
Q Consensus       167 --------~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  224 (263)
                              .++..|+||            |||||||+++||++|..|+.....   .+.........  .....+.. ..
T Consensus       164 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~  239 (284)
T cd05081         164 YYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPA---EFMRMMGNDKQGQMIVYHLIE-LL  239 (284)
T ss_pred             ceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcch---hhhhhcccccccccchHHHHH-HH
Confidence                    112348888            999999999999998877543211   01000000000  00000000 00


Q ss_pred             cccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          225 LSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       225 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                        ......+.+..++.++.+++.+||..+|++|||+.||
T Consensus       240 --~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei  276 (284)
T cd05081         240 --KNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSEL  276 (284)
T ss_pred             --hcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHH
Confidence              0111222344567789999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.5e-34  Score=234.87  Aligned_cols=210  Identities=23%  Similarity=0.377  Sum_probs=169.3

Q ss_pred             ccccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccC
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMP  111 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~  111 (263)
                      .+|+..+.+|.|++|.||.+... ++.|++|.+..... ..+++.+|+.+++.++|+|++++++++.+....++++|+++
T Consensus         6 ~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   83 (256)
T cd05039           6 KELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMA   83 (256)
T ss_pred             hhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecC
Confidence            35888999999999999999866 88999999976643 56778899999999999999999999998889999999999


Q ss_pred             CCCHhhhhhhCCC-cccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc--------------------cccc
Q 039276          112 HGSLGKCLSTSNY-ILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT--------------------LATI  170 (263)
Q Consensus       112 ~~~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~--------------------~g~~  170 (263)
                      +++|.+++..... .+++..+..++.|++.||.|||.++++|+||+|+||+.+...                    ..+.
T Consensus        84 ~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~  163 (256)
T cd05039          84 KGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLPV  163 (256)
T ss_pred             CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEcccccccccccccccCCCcc
Confidence            9999999976542 488999999999999999999999999999999999965322                    1244


Q ss_pred             cccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHH
Q 039276          171 SYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQ  237 (263)
Q Consensus       171 ~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (263)
                      .|+||            ||||||++++|+++ |..||......  .+.....            ..      .+...+..
T Consensus       164 ~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~~------------~~------~~~~~~~~  223 (256)
T cd05039         164 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVPHVE------------KG------YRMEAPEG  223 (256)
T ss_pred             cccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHh------------cC------CCCCCccC
Confidence            58888            99999999999997 99998643111  1111110            00      00111234


Q ss_pred             HHHHHHHhhccccccCcCCCCCccCC
Q 039276          238 CMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       238 ~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +++++.+++.+||..+|++|||++||
T Consensus       224 ~~~~~~~li~~~l~~~p~~Rp~~~~l  249 (256)
T cd05039         224 CPPEVYKVMKDCWELDPAKRPTFKQL  249 (256)
T ss_pred             CCHHHHHHHHHHhccChhhCcCHHHH
Confidence            56779999999999999999999874

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=8.1e-35  Score=258.59  Aligned_cols=209  Identities=22%  Similarity=0.284  Sum_probs=171.8

Q ss_pred             ccccccceecccCceEEEEEEecCC-ceEEEEEeecCCCchHHHHHHHHHHHhhcC-CCcceeEeeEe-ec------CCe
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQDG-MEVVVKGFNLQYGGAFKNLDVECNMMKIIR-HQNLIKIISSC-SK------DDF  102 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~~-~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~-~~------~~~  102 (263)
                      ..++..+.|.+|||+.||++....+ .+||+|+.-..+....+.+.+||++++.|. |+|||.+++.. ..      ...
T Consensus        37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~E  116 (738)
T KOG1989|consen   37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWE  116 (738)
T ss_pred             EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeE
Confidence            4588889999999999999996555 999999998777777888999999999995 99999999943 11      135


Q ss_pred             eEEEEeccCCCCHhhhhhhC-CCcccHHHHHHHHHHHHHHHHHhccCC--ccccccCCCcccccccc-------------
Q 039276          103 KALILECMPHGSLGKCLSTS-NYILDFFQRLHIMIDVASAVEYLHFGH--STHLLLKEDQSLTQIQT-------------  166 (263)
Q Consensus       103 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~--i~h~dlk~~nil~~~~~-------------  166 (263)
                      .+|+||||++|.|-+++... ...+.+.++++|+.++++|+++||...  |+|||||-||+|+...+             
T Consensus       117 vllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~  196 (738)
T KOG1989|consen  117 VLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTK  196 (738)
T ss_pred             EEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcccccccc
Confidence            78999999999999999843 222999999999999999999999887  99999999999955432             


Q ss_pred             -------------------cccccccCc---------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcC
Q 039276          167 -------------------LATISYMAP---------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLL  212 (263)
Q Consensus       167 -------------------~g~~~y~aP---------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~  212 (263)
                                         ..|+.|+||               |||+|||+||-|+....||....              
T Consensus       197 ~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg--------------  262 (738)
T KOG1989|consen  197 ILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESG--------------  262 (738)
T ss_pred             cCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCc--------------
Confidence                               348889999               99999999999999999987421              


Q ss_pred             CCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          213 PNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                         ...|++...      .+|..+..++.+.+||+.||+.||.+||++-+|
T Consensus       263 ---~laIlng~Y------~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv  304 (738)
T KOG1989|consen  263 ---KLAILNGNY------SFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQV  304 (738)
T ss_pred             ---ceeEEeccc------cCCCCccHHHHHHHHHHHHhccCcccCCCHHHH
Confidence               112222221      223346788889999999999999999998653

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=100.00  E-value=1.6e-34  Score=236.34  Aligned_cols=203  Identities=21%  Similarity=0.327  Sum_probs=158.9

Q ss_pred             eecccCceEEEEEEe---cCCceEEEEEeecCCC--chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccCCC
Q 039276           39 LISRGGFGSIYKAKI---QDGMEVVVKGFNLQYG--GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHG  113 (263)
Q Consensus        39 ~lg~g~~g~v~~~~~---~~~~~v~vK~~~~~~~--~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~  113 (263)
                      .||+|+||.||+|.+   .++..+++|++.....  ...+.+.+|+.+++.++|+|++++++++.. ...++++||++++
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~~   80 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA-ESWMLVMELAELG   80 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCcEEEEecCCCC
Confidence            589999999999964   3478899999865532  245678889999999999999999998754 4678999999999


Q ss_pred             CHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc--------------------------c
Q 039276          114 SLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT--------------------------L  167 (263)
Q Consensus       114 ~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~--------------------------~  167 (263)
                      +|.+++..... +++..+..++.|++.||+|||+++++|+||||+||+.....                          .
T Consensus        81 ~L~~~l~~~~~-~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~  159 (257)
T cd05116          81 PLNKFLQKNKH-VTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGK  159 (257)
T ss_pred             cHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCC
Confidence            99999976543 88899999999999999999999999999999999843211                          1


Q ss_pred             ccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccc
Q 039276          168 ATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT  234 (263)
Q Consensus       168 g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (263)
                      ++..|+||            |||||||++|||++ |+.||.....  ..+....            ..      ....+.
T Consensus       160 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--~~~~~~i------------~~------~~~~~~  219 (257)
T cd05116         160 WPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKG--NEVTQMI------------ES------GERMEC  219 (257)
T ss_pred             CCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHH------------HC------CCCCCC
Confidence            23578998            99999999999998 9999864211  1111111            11      011122


Q ss_pred             hHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          235 KEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       235 ~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +..+++++.+++.+||+.||++||++++|
T Consensus       220 ~~~~~~~l~~li~~~~~~~p~~Rp~~~~i  248 (257)
T cd05116         220 PQRCPPEMYDLMKLCWTYGVDERPGFAVV  248 (257)
T ss_pred             CCCCCHHHHHHHHHHhccCchhCcCHHHH
Confidence            34567789999999999999999999764

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=100.00  E-value=1e-34  Score=257.65  Aligned_cols=212  Identities=19%  Similarity=0.224  Sum_probs=167.2

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecCC-------
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDD-------  101 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-------  101 (263)
                      .+|...+.||+|+||.||++. ..+++.||+|.+....  ......+.+|+.++..++|+|++++...+....       
T Consensus        32 ~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~  111 (496)
T PTZ00283         32 KKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENV  111 (496)
T ss_pred             CCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccc
Confidence            469999999999999999998 5569999999997652  334556778999999999999999887764321       


Q ss_pred             -eeEEEEeccCCCCHhhhhhhC---CCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc------------
Q 039276          102 -FKALILECMPHGSLGKCLSTS---NYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ------------  165 (263)
Q Consensus       102 -~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~------------  165 (263)
                       ..+++|||+++|+|.+++...   ...+++..+..++.|++.||.|||+++++||||||+||+++..            
T Consensus       112 ~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DFGls~  191 (496)
T PTZ00283        112 LMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSK  191 (496)
T ss_pred             eEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEecccCe
Confidence             368999999999999988643   2347888999999999999999999999999999999995321            


Q ss_pred             -------------ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhh
Q 039276          166 -------------TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVV  220 (263)
Q Consensus       166 -------------~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (263)
                                   ..||+.|+||            |||||||++|||++|+.||....     ......           
T Consensus       192 ~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~-----~~~~~~-----------  255 (496)
T PTZ00283        192 MYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGEN-----MEEVMH-----------  255 (496)
T ss_pred             eccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC-----HHHHHH-----------
Confidence                         2478889999            99999999999999999985321     111111           


Q ss_pred             hhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          221 SANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                       .....   ...+.+..+++++.+++.+||+.+|.+||++.++
T Consensus       256 -~~~~~---~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~el  294 (496)
T PTZ00283        256 -KTLAG---RYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKL  294 (496)
T ss_pred             -HHhcC---CCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHH
Confidence             10000   0112244567789999999999999999998764

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=100.00  E-value=2.2e-34  Score=235.84  Aligned_cols=210  Identities=19%  Similarity=0.311  Sum_probs=165.6

Q ss_pred             ccccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccC
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMP  111 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~  111 (263)
                      ++|+..++||+|+||.||+|...+++.+++|.+..... ....+.+|+.+++.++|+|++++++++. .+..++++|+++
T Consensus         6 ~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~   83 (260)
T cd05067           6 ETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYME   83 (260)
T ss_pred             HHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcCC
Confidence            45888999999999999999977789999999875533 3467888999999999999999999874 456899999999


Q ss_pred             CCCHhhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc------------------------
Q 039276          112 HGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT------------------------  166 (263)
Q Consensus       112 ~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~------------------------  166 (263)
                      +++|.+++.... ..+++.++..++.|++.||+|||+.+++|+||+|+||+.+...                        
T Consensus        84 ~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~  163 (260)
T cd05067          84 NGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGA  163 (260)
T ss_pred             CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCcccccCC
Confidence            999999886532 3478888999999999999999999999999999999954321                        


Q ss_pred             cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccccc
Q 039276          167 LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFM  233 (263)
Q Consensus       167 ~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (263)
                      .++..|+||            ||||||++++|+++ |+.||.....  ......+.            ..      .+.+
T Consensus       164 ~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~~~~~------------~~------~~~~  223 (260)
T cd05067         164 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTN--PEVIQNLE------------RG------YRMP  223 (260)
T ss_pred             cccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCCh--HHHHHHHH------------cC------CCCC
Confidence            224568888            99999999999999 9999863211  11111100            00      0111


Q ss_pred             chHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          234 TKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       234 ~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .+..++.++.+++.+||..+|++|||+++|
T Consensus       224 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l  253 (260)
T cd05067         224 RPDNCPEELYELMRLCWKEKPEERPTFEYL  253 (260)
T ss_pred             CCCCCCHHHHHHHHHHccCChhhCCCHHHH
Confidence            233455679999999999999999999764

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.8e-35  Score=252.37  Aligned_cols=212  Identities=20%  Similarity=0.350  Sum_probs=173.3

Q ss_pred             cccccceecccCceEEEEEEecC--C---ceEEEEEeecC---CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeE
Q 039276           33 LFSESNLISRGGFGSIYKAKIQD--G---MEVVVKGFNLQ---YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKA  104 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~~~--~---~~v~vK~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~  104 (263)
                      +....++||+|+||.||.|+...  +   ..||+|..+.+   .....+.+++|++++++++|+||++++|+.......+
T Consensus       158 ~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~  237 (474)
T KOG0194|consen  158 DIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLM  237 (474)
T ss_pred             CccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccE
Confidence            46667999999999999998432  2   23899998863   3456778999999999999999999999999999999


Q ss_pred             EEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccccc-----------------
Q 039276          105 LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQTL-----------------  167 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~~-----------------  167 (263)
                      ++||+|+||+|.++++..+..++..++..++.+.+.||+|||.++++||||-.+|+|......                 
T Consensus       238 ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~  317 (474)
T KOG0194|consen  238 LVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVM  317 (474)
T ss_pred             EEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccccCCcceee
Confidence            999999999999999988766899999999999999999999999999999999999654221                 


Q ss_pred             ------ccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccc
Q 039276          168 ------ATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSRE  228 (263)
Q Consensus       168 ------g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (263)
                            -...|+||            |||||||++||+++ |..||......  ..            ...     ....
T Consensus       318 ~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~--~v------------~~k-----I~~~  378 (474)
T KOG0194|consen  318 KKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY--EV------------KAK-----IVKN  378 (474)
T ss_pred             ccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH--HH------------HHH-----HHhc
Confidence                  24669999            99999999999999 89898643111  01            111     1122


Q ss_pred             cccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          229 DEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       229 ~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +.+.+.+...+.++..++.+||..+|++||||.++
T Consensus       379 ~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i  413 (474)
T KOG0194|consen  379 GYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTI  413 (474)
T ss_pred             CccCCCCCCCHHHHHHHHHHhccCChhhccCHHHH
Confidence            33445566777889999999999999999999764

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=100.00  E-value=3.8e-34  Score=238.15  Aligned_cols=232  Identities=19%  Similarity=0.220  Sum_probs=168.4

Q ss_pred             cccccccceecccCceEEEEEEe-cCCceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEe
Q 039276           31 LFLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      .+.|+..+.||+|++|.||+|.. .+++.|++|.+.... ........+|+++++.++|+||+++++++.+....++|+|
T Consensus         4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   83 (291)
T cd07844           4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFE   83 (291)
T ss_pred             ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEe
Confidence            35699999999999999999994 468899999987543 2233456689999999999999999999999999999999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc----------------------
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT----------------------  166 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~----------------------  166 (263)
                      |+++ +|.+++......+++..+..++.|++.||+|||+.+++|+||+|+||+.+...                      
T Consensus        84 ~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~  162 (291)
T cd07844          84 YLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTYSN  162 (291)
T ss_pred             cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCCCccccc
Confidence            9985 99998876555688899999999999999999999999999999999954321                      


Q ss_pred             -cccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCC---chhhhhhhccccccc
Q 039276          167 -LATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPN---SVMKVVSANLLSRED  229 (263)
Q Consensus       167 -~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~  229 (263)
                       .++..|+||             |||||||++++|++|+.||.........+..........   .........-.....
T Consensus       163 ~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (291)
T cd07844         163 EVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYS  242 (291)
T ss_pred             cccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcccccccc
Confidence             245668888             999999999999999999864332112221111111100   000000000000000


Q ss_pred             ccc-------cchHHHH--HHHHHhhccccccCcCCCCCccCC
Q 039276          230 EHF-------MTKEQCM--SFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       230 ~~~-------~~~~~~~--~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ...       ......+  .++.+++.+||+.+|++|||+.|+
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~  285 (291)
T cd07844         243 FPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEA  285 (291)
T ss_pred             ccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHH
Confidence            000       0001122  568899999999999999999864

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=100.00  E-value=2.1e-34  Score=235.72  Aligned_cols=204  Identities=21%  Similarity=0.352  Sum_probs=159.5

Q ss_pred             eecccCceEEEEEEec---CCceEEEEEeecCCC-chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccCCCC
Q 039276           39 LISRGGFGSIYKAKIQ---DGMEVVVKGFNLQYG-GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGS  114 (263)
Q Consensus        39 ~lg~g~~g~v~~~~~~---~~~~v~vK~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~  114 (263)
                      .||+|+||.||+|.+.   .+..|++|.+..... ...+.+.+|++++++++|+|++++++++.. ...+++|||+++++
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~~~   80 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASGGP   80 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCCCC
Confidence            3899999999999743   355689999876533 234568899999999999999999998754 46799999999999


Q ss_pred             HhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc--------------------------cc
Q 039276          115 LGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT--------------------------LA  168 (263)
Q Consensus       115 L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~--------------------------~g  168 (263)
                      |.+++......+++..++.++.|++.||+|||+++++|+||||+||+.....                          .+
T Consensus        81 L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~  160 (257)
T cd05115          81 LNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKW  160 (257)
T ss_pred             HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCCCC
Confidence            9999976555589999999999999999999999999999999999843211                          11


Q ss_pred             cccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccch
Q 039276          169 TISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTK  235 (263)
Q Consensus       169 ~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (263)
                      +..|+||            |||||||++||+++ |..||......  .+...            +...      .+...+
T Consensus       161 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~------------~~~~------~~~~~~  220 (257)
T cd05115         161 PLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP--EVMSF------------IEQG------KRLDCP  220 (257)
T ss_pred             CcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH--HHHHH------------HHCC------CCCCCC
Confidence            3569999            99999999999996 99998643111  11111            1100      111224


Q ss_pred             HHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          236 EQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       236 ~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ..+++++.+++.+||+.+|++||++.+|
T Consensus       221 ~~~~~~l~~li~~c~~~~~~~Rp~~~~i  248 (257)
T cd05115         221 AECPPEMYALMKDCWIYKWEDRPNFAKV  248 (257)
T ss_pred             CCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence            4567789999999999999999999764

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=100.00  E-value=3.2e-34  Score=235.63  Aligned_cols=213  Identities=23%  Similarity=0.341  Sum_probs=168.9

Q ss_pred             ccccceecccCceEEEEEE-ecCCceEEEEEeecCCC------chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEE
Q 039276           34 FSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYG------GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALI  106 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~------~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv  106 (263)
                      |+..+.||+|++|.||++. ..++..+++|.+.....      ...+.+.+|+.++++++|+|++++++.+.+.+..+++
T Consensus         2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v   81 (268)
T cd06630           2 WLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLF   81 (268)
T ss_pred             ccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEE
Confidence            7788999999999999998 46689999999975431      1345678899999999999999999999999999999


Q ss_pred             EeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc--------------------
Q 039276          107 LECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT--------------------  166 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~--------------------  166 (263)
                      +||+++++|.+++.... .+++..+..++.|++.||+|||+++++|+||+|+||+.+...                    
T Consensus        82 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~  160 (268)
T cd06630          82 VEWMAGGSVSHLLSKYG-AFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTG  160 (268)
T ss_pred             EeccCCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccccccccccccccc
Confidence            99999999999997654 378889999999999999999999999999999999964321                    


Q ss_pred             --------cccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccc
Q 039276          167 --------LATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLS  226 (263)
Q Consensus       167 --------~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (263)
                              .++..|+||            ||||+||++++|++|..||........ .....         ....     
T Consensus       161 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~-~~~~~---------~~~~-----  225 (268)
T cd06630         161 AGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNH-LALIF---------KIAS-----  225 (268)
T ss_pred             CCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcch-HHHHH---------HHhc-----
Confidence                    245578888            999999999999999999863211110 00000         0000     


Q ss_pred             cccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          227 REDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       227 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                       .......+...++++.+++.+||..+|++|||+.++
T Consensus       226 -~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~l  261 (268)
T cd06630         226 -ATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSREL  261 (268)
T ss_pred             -cCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHH
Confidence             000112344567789999999999999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=100.00  E-value=3.2e-34  Score=237.40  Aligned_cols=212  Identities=19%  Similarity=0.229  Sum_probs=164.8

Q ss_pred             cccccceecccCceEEEEEE-ecCCceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           33 LFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      .|+..+.||+|+||.||+|. ..+++.+++|.+.... ......+.+|++++++++|+|++++++.+...+..++++||+
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   81 (279)
T cd06619           2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM   81 (279)
T ss_pred             cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence            47788999999999999998 4568899999987552 234456888999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc---------------------cccc
Q 039276          111 PHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ---------------------TLAT  169 (263)
Q Consensus       111 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~---------------------~~g~  169 (263)
                      ++++|..+.     .+++..+..++.|++.||+|||+.+++|+||+|+||+.+..                     ..++
T Consensus        82 ~~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~  156 (279)
T cd06619          82 DGGSLDVYR-----KIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYVGT  156 (279)
T ss_pred             CCCChHHhh-----cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccccccCCCCC
Confidence            999987542     26778888999999999999999999999999999995431                     2467


Q ss_pred             ccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchh--hhHhhhcCCCchhhhhhhcccccccccccch
Q 039276          170 ISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTL--KHWVNDLLPNSVMKVVSANLLSREDEHFMTK  235 (263)
Q Consensus       170 ~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (263)
                      ..|+||            |||||||++|+|++|+.||..........  ..........            . ... ...
T Consensus       157 ~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~------------~-~~~-~~~  222 (279)
T cd06619         157 NAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDE------------D-PPV-LPV  222 (279)
T ss_pred             hhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhcc------------C-CCC-CCC
Confidence            889999            99999999999999999987532221110  0000000000            0 000 011


Q ss_pred             HHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          236 EQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       236 ~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ...++++.+++.+||+.+|++||+++|+
T Consensus       223 ~~~~~~~~~li~~~l~~~P~~Rp~~~ei  250 (279)
T cd06619         223 GQFSEKFVHFITQCMRKQPKERPAPENL  250 (279)
T ss_pred             CcCCHHHHHHHHHHhhCChhhCCCHHHH
Confidence            2345668999999999999999998864

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=100.00  E-value=1.8e-34  Score=237.26  Aligned_cols=212  Identities=20%  Similarity=0.343  Sum_probs=166.9

Q ss_pred             ccccccceecccCceEEEEEEec-C---CceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ-D---GMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALI  106 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~-~---~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv  106 (263)
                      .+|+..+.||+|+||.||+|... +   +..+++|.+.... ......+.+|+.+++.++|||++++++++.+.+..+++
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   83 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV   83 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence            45888999999999999999842 2   3478999886542 23456788899999999999999999999988899999


Q ss_pred             EeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc--------------------
Q 039276          107 LECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT--------------------  166 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~--------------------  166 (263)
                      |||+++++|.+++......+++.++..++.|++.||+|||+.+++|+||+|+||+.+...                    
T Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~  163 (267)
T cd05066          84 TEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAA  163 (267)
T ss_pred             EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCccccccccccee
Confidence            999999999999987655588899999999999999999999999999999999854321                    


Q ss_pred             ------cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccc
Q 039276          167 ------LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSR  227 (263)
Q Consensus       167 ------~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (263)
                            .++..|++|            |||||||+++|+++ |..||......  .......            .     
T Consensus       164 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~--~~~~~~~------------~-----  224 (267)
T cd05066         164 YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ--DVIKAIE------------E-----  224 (267)
T ss_pred             eecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH--HHHHHHh------------C-----
Confidence                  113458888            99999999999886 99998643211  1111110            0     


Q ss_pred             ccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          228 EDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       228 ~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                       ..+.+.+..+++.+.+++.+|++.+|++|||+.+|
T Consensus       225 -~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i  259 (267)
T cd05066         225 -GYRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQI  259 (267)
T ss_pred             -CCcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHH
Confidence             01112234456678999999999999999999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=100.00  E-value=8.5e-35  Score=237.84  Aligned_cols=215  Identities=25%  Similarity=0.369  Sum_probs=166.0

Q ss_pred             ccccceecccCceEEEEEEe-cCCceEEEEEeecCCCchHH--HHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           34 FSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGAFK--NLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~~~~--~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      |+..+.||+|+||.||++.. .+++.+|+|.+.........  ....|+..++.++|+||+++++++.+....+++||++
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~   80 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC   80 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence            67789999999999999994 45778999999887543322  3345999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-----------------------ccc
Q 039276          111 PHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-----------------------QTL  167 (263)
Q Consensus       111 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-----------------------~~~  167 (263)
                      ++++|.+++..... +++..+..++.|++.||++||+.+++|+||+|+||+...                       ...
T Consensus        81 ~~~~L~~~l~~~~~-~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~  159 (260)
T PF00069_consen   81 PGGSLQDYLQKNKP-LSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNPFV  159 (260)
T ss_dssp             TTEBHHHHHHHHSS-BBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSSSS
T ss_pred             cccccccccccccc-ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99999999984333 899999999999999999999999999999999999542                       124


Q ss_pred             ccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccc
Q 039276          168 ATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT  234 (263)
Q Consensus       168 g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (263)
                      ++..|+||             ||||+|+++++|++|..||..... ....             .................
T Consensus       160 ~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~-~~~~-------------~~~~~~~~~~~~~~~~~  225 (260)
T PF00069_consen  160 GTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNS-DDQL-------------EIIEKILKRPLPSSSQQ  225 (260)
T ss_dssp             SSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSH-HHHH-------------HHHHHHHHTHHHHHTTS
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccc-hhhh-------------hhhhhcccccccccccc
Confidence            67779998             999999999999999999875300 0000             00000000000000001


Q ss_pred             hHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          235 KEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       235 ~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ....+.++.+++.+||+.||++|||+.++
T Consensus       226 ~~~~~~~l~~li~~~l~~~p~~R~~~~~l  254 (260)
T PF00069_consen  226 SREKSEELRDLIKKMLSKDPEQRPSAEEL  254 (260)
T ss_dssp             HTTSHHHHHHHHHHHSSSSGGGSTTHHHH
T ss_pred             cchhHHHHHHHHHHHccCChhHCcCHHHH
Confidence            11223679999999999999999999764

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=100.00  E-value=1.5e-34  Score=244.51  Aligned_cols=203  Identities=21%  Similarity=0.212  Sum_probs=157.6

Q ss_pred             ceecccCceEEEEEEe-cCCceEEEEEeecCC---CchHHHHHHHH-HHHhhcCCCcceeEeeEeecCCeeEEEEeccCC
Q 039276           38 NLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY---GGAFKNLDVEC-NMMKIIRHQNLIKIISSCSKDDFKALILECMPH  112 (263)
Q Consensus        38 ~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~---~~~~~~~~~e~-~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~  112 (263)
                      +.||+|+||.||++.. .+++.+|+|++....   ......+..|. .+++.++|+||+++++.+.+.+..+++|||+++
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING   80 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence            3689999999999994 457889999997542   12223334444 456778999999999999999999999999999


Q ss_pred             CCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------cccc
Q 039276          113 GSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------TLAT  169 (263)
Q Consensus       113 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------~~g~  169 (263)
                      ++|.+++..... +.+..+..++.|++.||+|||+++++||||||+||+.+..                       ..|+
T Consensus        81 ~~L~~~~~~~~~-~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt  159 (325)
T cd05602          81 GELFYHLQRERC-FLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCGT  159 (325)
T ss_pred             CcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcccccCC
Confidence            999999976544 7788888899999999999999999999999999985321                       2478


Q ss_pred             ccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHH
Q 039276          170 ISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQ  237 (263)
Q Consensus       170 ~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (263)
                      +.|+||            |||||||++|||++|+.||...... ..+...            ....        ......
T Consensus       160 ~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i------------~~~~--------~~~~~~  218 (325)
T cd05602         160 PEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA-EMYDNI------------LNKP--------LQLKPN  218 (325)
T ss_pred             ccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHH-HHHHHH------------HhCC--------cCCCCC
Confidence            899999            9999999999999999998632111 001100            0000        011234


Q ss_pred             HHHHHHHhhccccccCcCCCCCccC
Q 039276          238 CMSFVFNLAMECTVESPNQRINAKE  262 (263)
Q Consensus       238 ~~~~l~~l~~~cl~~~p~~Rpt~~e  262 (263)
                      +++++.+++.+||+.+|.+||++.+
T Consensus       219 ~~~~~~~li~~~l~~~p~~R~~~~~  243 (325)
T cd05602         219 ITNSARHLLEGLLQKDRTKRLGAKD  243 (325)
T ss_pred             CCHHHHHHHHHHcccCHHHCCCCCC
Confidence            5667999999999999999999864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=100.00  E-value=4e-34  Score=234.71  Aligned_cols=211  Identities=21%  Similarity=0.306  Sum_probs=165.0

Q ss_pred             cccccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           31 LFLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      ..+|+..+.||+|++|.||+|...+...|++|.+..... ..+.+..|+++++.++|+|++++++.+.+ ...+++|||+
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~   82 (262)
T cd05071           5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM   82 (262)
T ss_pred             hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEEcC
Confidence            346999999999999999999876667899999976432 34568889999999999999999998754 4579999999


Q ss_pred             CCCCHhhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc-----------------------
Q 039276          111 PHGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT-----------------------  166 (263)
Q Consensus       111 ~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~-----------------------  166 (263)
                      ++++|.+++.... ..+++..+..++.|++.||+|||+.+++|+||+|+||+.....                       
T Consensus        83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~  162 (262)
T cd05071          83 SKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG  162 (262)
T ss_pred             CCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeeccccccccccC
Confidence            9999999997532 3378889999999999999999999999999999999854211                       


Q ss_pred             -cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccc
Q 039276          167 -LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHF  232 (263)
Q Consensus       167 -~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (263)
                       .++..|+||            |||||||++|||++ |..||....... ....             ...      ....
T Consensus       163 ~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~-~~~~-------------~~~------~~~~  222 (262)
T cd05071         163 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-VLDQ-------------VER------GYRM  222 (262)
T ss_pred             CcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHH-HHHH-------------Hhc------CCCC
Confidence             234468999            99999999999999 888875321110 0000             000      0011


Q ss_pred             cchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          233 MTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       233 ~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +.+..++..+.+++.+|++.+|++|||+.++
T Consensus       223 ~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~  253 (262)
T cd05071         223 PCPPECPESLHDLMCQCWRKEPEERPTFEYL  253 (262)
T ss_pred             CCccccCHHHHHHHHHHccCCcccCCCHHHH
Confidence            1234566779999999999999999998764

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=100.00  E-value=1.5e-34  Score=244.14  Aligned_cols=202  Identities=22%  Similarity=0.240  Sum_probs=157.3

Q ss_pred             ceecccCceEEEEEEe-cCCceEEEEEeecCC---CchHHHHHHHHH-HHhhcCCCcceeEeeEeecCCeeEEEEeccCC
Q 039276           38 NLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY---GGAFKNLDVECN-MMKIIRHQNLIKIISSCSKDDFKALILECMPH  112 (263)
Q Consensus        38 ~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~---~~~~~~~~~e~~-~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~  112 (263)
                      +.||+|+||.||++.. .++..||+|++....   ......+..|.. +++.++|+||+++++.+.+.+..+++|||+++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG   80 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            3689999999999994 568899999997542   223344455544 67888999999999999999999999999999


Q ss_pred             CCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------cccc
Q 039276          113 GSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------TLAT  169 (263)
Q Consensus       113 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------~~g~  169 (263)
                      ++|...+..... +++..+..++.|++.||+|||+++++||||||+||+++..                       ..|+
T Consensus        81 ~~L~~~l~~~~~-~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt  159 (321)
T cd05603          81 GELFFHLQRERC-FLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCGT  159 (321)
T ss_pred             CCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccccccCC
Confidence            999988876443 7888899999999999999999999999999999985321                       2467


Q ss_pred             ccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHH
Q 039276          170 ISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQ  237 (263)
Q Consensus       170 ~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (263)
                      +.|+||            |||||||++|||++|+.||....     ......        .+...        ....+..
T Consensus       160 ~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-----~~~~~~--------~i~~~--------~~~~~~~  218 (321)
T cd05603         160 PEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRD-----VSQMYD--------NILHK--------PLQLPGG  218 (321)
T ss_pred             cccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCC-----HHHHHH--------HHhcC--------CCCCCCC
Confidence            889999            99999999999999999986421     011100        00000        0112234


Q ss_pred             HHHHHHHhhccccccCcCCCCCcc
Q 039276          238 CMSFVFNLAMECTVESPNQRINAK  261 (263)
Q Consensus       238 ~~~~l~~l~~~cl~~~p~~Rpt~~  261 (263)
                      .+.++.+++.+||+.+|.+||++.
T Consensus       219 ~~~~~~~li~~~l~~~p~~R~~~~  242 (321)
T cd05603         219 KTVAACDLLVGLLHKDQRRRLGAK  242 (321)
T ss_pred             CCHHHHHHHHHHccCCHhhcCCCC
Confidence            456689999999999999999874

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=1.8e-34  Score=266.08  Aligned_cols=212  Identities=19%  Similarity=0.229  Sum_probs=166.2

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeec--CCeeEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSK--DDFKALI  106 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~lv  106 (263)
                      .+|...+.||+|+||.||++.. .++..+++|.+....  ......+..|+.+++.++||||+++++++.+  ...+|+|
T Consensus        13 ~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyIV   92 (1021)
T PTZ00266         13 NEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYIL   92 (1021)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEEE
Confidence            4599999999999999999994 457788999987542  3345678889999999999999999998854  4578999


Q ss_pred             EeccCCCCHhhhhhhC---CCcccHHHHHHHHHHHHHHHHHhccC-------CccccccCCCcccccc------------
Q 039276          107 LECMPHGSLGKCLSTS---NYILDFFQRLHIMIDVASAVEYLHFG-------HSTHLLLKEDQSLTQI------------  164 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~-------~i~h~dlk~~nil~~~------------  164 (263)
                      |||+++++|.+++...   ...+++..++.|+.||+.||+|||..       +|+|+||||+||++..            
T Consensus        93 MEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~  172 (1021)
T PTZ00266         93 MEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQA  172 (1021)
T ss_pred             EeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccc
Confidence            9999999999998752   23489999999999999999999984       4999999999999632            


Q ss_pred             ---------------------------cccccccccCc--------------chhhHHHHHHHHHhCCCCCccccCCCch
Q 039276          165 ---------------------------QTLATISYMAP--------------DTYNFGIMIMETFSGKKPTIKFFHGEMT  203 (263)
Q Consensus       165 ---------------------------~~~g~~~y~aP--------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~  203 (263)
                                                 ...||+.|+||              |||||||++|||++|+.||....    .
T Consensus       173 ~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~----~  248 (1021)
T PTZ00266        173 NNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKAN----N  248 (1021)
T ss_pred             cccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCC----c
Confidence                                       11468889999              99999999999999999986421    1


Q ss_pred             hhhHhhhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          204 LKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +..+....         ....  .     ......+.++.+|+..||+.+|.+|||+.|+
T Consensus       249 ~~qli~~l---------k~~p--~-----lpi~~~S~eL~dLI~~~L~~dPeeRPSa~Ql  292 (1021)
T PTZ00266        249 FSQLISEL---------KRGP--D-----LPIKGKSKELNILIKNLLNLSAKERPSALQC  292 (1021)
T ss_pred             HHHHHHHH---------hcCC--C-----CCcCCCCHHHHHHHHHHhcCChhHCcCHHHH
Confidence            11111110         0000  0     0012345679999999999999999998764

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=100.00  E-value=1.7e-34  Score=248.19  Aligned_cols=211  Identities=17%  Similarity=0.185  Sum_probs=164.0

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCC---CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      .+|+..+.||+|+||.||++. ..+++.+|+|++....   ......+.+|+.+++.++||||+++++.+.+....+++|
T Consensus        43 ~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~  122 (371)
T cd05622          43 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVM  122 (371)
T ss_pred             hhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence            469999999999999999999 4568899999986532   223455678999999999999999999999999999999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-----------------------
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-----------------------  164 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-----------------------  164 (263)
                      ||+++++|.+++....  +++..+..++.|++.||+|||+++++||||||+||+++.                       
T Consensus       123 Ey~~gg~L~~~~~~~~--~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~~~  200 (371)
T cd05622         123 EYMPGGDLVNLMSNYD--VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC  200 (371)
T ss_pred             cCCCCCcHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCcccc
Confidence            9999999999987543  788888899999999999999999999999999999432                       


Q ss_pred             -cccccccccCc----------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccc
Q 039276          165 -QTLATISYMAP----------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSR  227 (263)
Q Consensus       165 -~~~g~~~y~aP----------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (263)
                       ...||+.|+||                |||||||++|||++|+.||..... ...+....                ...
T Consensus       201 ~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~-~~~~~~i~----------------~~~  263 (371)
T cd05622         201 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL-VGTYSKIM----------------NHK  263 (371)
T ss_pred             cCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCH-HHHHHHHH----------------cCC
Confidence             12478899999                999999999999999999863210 00111111                000


Q ss_pred             ccccccchHHHHHHHHHhhccccccCcCC---CCCccC
Q 039276          228 EDEHFMTKEQCMSFVFNLAMECTVESPNQ---RINAKE  262 (263)
Q Consensus       228 ~~~~~~~~~~~~~~l~~l~~~cl~~~p~~---Rpt~~e  262 (263)
                      .....+....++.++.+++.+|+. +|..   |+++++
T Consensus       264 ~~~~~~~~~~~s~~~~~li~~~L~-~~~~r~~r~~~~e  300 (371)
T cd05622         264 NSLTFPDDNDISKEAKNLICAFLT-DREVRLGRNGVEE  300 (371)
T ss_pred             CcccCCCcCCCCHHHHHHHHHHcC-ChhhhcCCCCHHH
Confidence            011112233567779999999998 5554   566654

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=100.00  E-value=2.9e-34  Score=236.06  Aligned_cols=211  Identities=22%  Similarity=0.385  Sum_probs=166.5

Q ss_pred             cccccceecccCceEEEEEEec-CC---ceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           33 LFSESNLISRGGFGSIYKAKIQ-DG---MEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~~-~~---~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      .|+..+.||+|++|.||+|... ++   ..+++|.+.... ....+.+.+|+++++.++|+|++++.+++.+.+..+++|
T Consensus         6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   85 (268)
T cd05063           6 HITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIIT   85 (268)
T ss_pred             HceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEE
Confidence            4888999999999999999853 33   368999886552 334567889999999999999999999999989999999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc---------------------
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT---------------------  166 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~---------------------  166 (263)
                      ||+++++|.+++......+++.++..++.|++.|++|||+.+++|+||+|+||+.+.+.                     
T Consensus        86 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~  165 (268)
T cd05063          86 EYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTY  165 (268)
T ss_pred             EcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceecccccccce
Confidence            99999999999976555588999999999999999999999999999999999854321                     


Q ss_pred             -----cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccc
Q 039276          167 -----LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSRE  228 (263)
Q Consensus       167 -----~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (263)
                           ..+..|+||            |||||||++|||++ |+.||.....  ..+...+.            ..     
T Consensus       166 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~--~~~~~~i~------------~~-----  226 (268)
T cd05063         166 TTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN--HEVMKAIN------------DG-----  226 (268)
T ss_pred             eccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH--HHHHHHHh------------cC-----
Confidence                 112358888            99999999999997 9999853211  11111110            00     


Q ss_pred             cccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          229 DEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       229 ~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                       .+.+....++.++.+++.+||+.+|++||++.+|
T Consensus       227 -~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i  260 (268)
T cd05063         227 -FRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDI  260 (268)
T ss_pred             -CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHH
Confidence             1112233456679999999999999999999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=100.00  E-value=6.6e-34  Score=235.22  Aligned_cols=210  Identities=22%  Similarity=0.306  Sum_probs=169.1

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      +.|+..+.||.|+||.||.|.. .++..+++|.+.... ....+.+.+|+.+++.++|+|++++++.+.++...+++|||
T Consensus         4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (277)
T cd06640           4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY   83 (277)
T ss_pred             HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence            4588899999999999999985 458899999987653 33456788899999999999999999999999999999999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc-----------------------
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT-----------------------  166 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~-----------------------  166 (263)
                      +++++|.+++..+  .+++.++..++.|++.||+|||+.+++|+||+|+||+.+...                       
T Consensus        84 ~~~~~L~~~i~~~--~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~  161 (277)
T cd06640          84 LGGGSALDLLRAG--PFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTF  161 (277)
T ss_pred             CCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCccccccc
Confidence            9999999998753  378888899999999999999999999999999999954321                       


Q ss_pred             cccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccc
Q 039276          167 LATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT  234 (263)
Q Consensus       167 ~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (263)
                      .++..|+||            |+|||||++|||++|..||........              .......      .....
T Consensus       162 ~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~--------------~~~~~~~------~~~~~  221 (277)
T cd06640         162 VGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRV--------------LFLIPKN------NPPTL  221 (277)
T ss_pred             cCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhH--------------hhhhhcC------CCCCC
Confidence            345668898            999999999999999999864211100              0000000      01122


Q ss_pred             hHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          235 KEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       235 ~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ...++.++.+++.+||+.+|++||++++|
T Consensus       222 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~i  250 (277)
T cd06640         222 TGEFSKPFKEFIDACLNKDPSFRPTAKEL  250 (277)
T ss_pred             chhhhHHHHHHHHHHcccCcccCcCHHHH
Confidence            34567789999999999999999999864

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=100.00  E-value=3.1e-34  Score=237.84  Aligned_cols=212  Identities=25%  Similarity=0.400  Sum_probs=164.8

Q ss_pred             ccccccceecccCceEEEEEEe-----cCCceEEEEEeecCCC-chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-----QDGMEVVVKGFNLQYG-GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKAL  105 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-----~~~~~v~vK~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l  105 (263)
                      .+|+..+.||+|+||.||+|..     ..+..+++|.+..... .....+.+|+++++.++|+|++++++++......++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l   84 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM   84 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence            3488889999999999999973     2457899999975432 334667889999999999999999999999889999


Q ss_pred             EEeccCCCCHhhhhhhCC----------------CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc---
Q 039276          106 ILECMPHGSLGKCLSTSN----------------YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT---  166 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~~----------------~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~---  166 (263)
                      +|||+++++|.+++....                ..+++.++..++.|++.||+|||+++++|+||||+||+.+...   
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~~k  164 (283)
T cd05090          85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVK  164 (283)
T ss_pred             EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCCcEE
Confidence            999999999999885321                1267788889999999999999999999999999999954321   


Q ss_pred             ----------------------cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhc
Q 039276          167 ----------------------LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDL  211 (263)
Q Consensus       167 ----------------------~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~  211 (263)
                                            .++..|+||            |||||||+++||++ |..||....  ...+.....  
T Consensus       165 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~--~~~~~~~~~--  240 (283)
T cd05090         165 ISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFS--NQEVIEMVR--  240 (283)
T ss_pred             eccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCC--HHHHHHHHH--
Confidence                                  123458888            99999999999998 999985321  111111111  


Q ss_pred             CCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          212 LPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                                ...      ..+.+..+++++.+++.+||+.+|++||++.+|
T Consensus       241 ----------~~~------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i  276 (283)
T cd05090         241 ----------KRQ------LLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDI  276 (283)
T ss_pred             ----------cCC------cCCCCCCCCHHHHHHHHHHcccCcccCcCHHHH
Confidence                      000      011233456779999999999999999999764

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=100.00  E-value=6.9e-34  Score=233.45  Aligned_cols=213  Identities=20%  Similarity=0.271  Sum_probs=168.5

Q ss_pred             cccccceecccCceEEEEEEec-CCceEEEEEeecC---CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEe
Q 039276           33 LFSESNLISRGGFGSIYKAKIQ-DGMEVVVKGFNLQ---YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~~-~~~~v~vK~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      +|+..+.||+|++|.||+|... +++.+++|.++..   .....+.+.+|+++++.++|++++++++.+.+.+..++++|
T Consensus         3 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   82 (267)
T cd08224           3 NFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLE   82 (267)
T ss_pred             ceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEe
Confidence            5889999999999999999954 7899999988643   23345678899999999999999999999999899999999


Q ss_pred             ccCCCCHhhhhhhC---CCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc--------------------
Q 039276          109 CMPHGSLGKCLSTS---NYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ--------------------  165 (263)
Q Consensus       109 ~~~~~~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~--------------------  165 (263)
                      |+++++|.+++...   ...++..++..++.+++.||+|||+.+++|+||+|+||+.+..                    
T Consensus        83 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~  162 (267)
T cd08224          83 LADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA  162 (267)
T ss_pred             cCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCCCcc
Confidence            99999999988642   2337888999999999999999999999999999999995421                    


Q ss_pred             ---ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccc
Q 039276          166 ---TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDE  230 (263)
Q Consensus       166 ---~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (263)
                         ..++..|+||            |||||||++++|++|+.||....   .............               .
T Consensus       163 ~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---~~~~~~~~~~~~~---------------~  224 (267)
T cd08224         163 AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK---MNLYSLCKKIEKC---------------D  224 (267)
T ss_pred             cceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCC---ccHHHHHhhhhcC---------------C
Confidence               2356678888            99999999999999999985321   1111111100000               0


Q ss_pred             cccc-hHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          231 HFMT-KEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       231 ~~~~-~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ..+. ...++.++.+++.+||..+|++|||+.+|
T Consensus       225 ~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~i  258 (267)
T cd08224         225 YPPLPADHYSEELRDLVSRCINPDPEKRPDISYV  258 (267)
T ss_pred             CCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHH
Confidence            0011 12556679999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=4.7e-34  Score=233.86  Aligned_cols=212  Identities=21%  Similarity=0.333  Sum_probs=169.2

Q ss_pred             cccccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           31 LFLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      .++|...+.||.|++|.||++...+++.+++|.+.... ...+.+.+|+.+++.++|+|++++++.+.+....++++|++
T Consensus         5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   83 (261)
T cd05034           5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYM   83 (261)
T ss_pred             hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEecc
Confidence            35689999999999999999997778889999987653 23467889999999999999999999998888899999999


Q ss_pred             CCCCHhhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc-----------------------
Q 039276          111 PHGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT-----------------------  166 (263)
Q Consensus       111 ~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~-----------------------  166 (263)
                      ++++|.+++.... ..+++..+..++.+++.|++|||+.+++|+||+|+||+.+...                       
T Consensus        84 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~  163 (261)
T cd05034          84 SKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREG  163 (261)
T ss_pred             CCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccchhhhhhhc
Confidence            9999999997643 3488899999999999999999999999999999999954321                       


Q ss_pred             -cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccc
Q 039276          167 -LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHF  232 (263)
Q Consensus       167 -~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (263)
                       .++..|+||            |||||||++++|++ |+.||..... ...+.....             .      .+.
T Consensus       164 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~-~~~~~~~~~-------------~------~~~  223 (261)
T cd05034         164 AKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN-REVLEQVER-------------G------YRM  223 (261)
T ss_pred             cCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHHc-------------C------CCC
Confidence             123468888            99999999999998 9999853211 111111100             0      001


Q ss_pred             cchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          233 MTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       233 ~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +.+..++.++.+++.+||+.+|++||++++|
T Consensus       224 ~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l  254 (261)
T cd05034         224 PRPPNCPEELYDLMLQCWDKDPEERPTFEYL  254 (261)
T ss_pred             CCCCCCCHHHHHHHHHHcccCcccCCCHHHH
Confidence            1223346679999999999999999999764

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=100.00  E-value=2.4e-34  Score=237.87  Aligned_cols=211  Identities=22%  Similarity=0.365  Sum_probs=165.1

Q ss_pred             cccccceecccCceEEEEEEec------CCceEEEEEeecCCCc-hHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEE
Q 039276           33 LFSESNLISRGGFGSIYKAKIQ------DGMEVVVKGFNLQYGG-AFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKAL  105 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~~------~~~~v~vK~~~~~~~~-~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l  105 (263)
                      .|...+.||+|++|.||+|...      .+..|++|.+...... ....+..|+.+++.++|+|++++++++.+....++
T Consensus         7 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l   86 (277)
T cd05036           7 SITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFI   86 (277)
T ss_pred             HcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcEE
Confidence            4888999999999999999854      3577889988655322 34457889999999999999999999988888999


Q ss_pred             EEeccCCCCHhhhhhhCC------CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc-------------
Q 039276          106 ILECMPHGSLGKCLSTSN------YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT-------------  166 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~~------~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~-------------  166 (263)
                      ++||+++++|.+++....      ..+++..+..++.|++.||+|||+++++|+||+|+||+.....             
T Consensus        87 v~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~  166 (277)
T cd05036          87 LLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMA  166 (277)
T ss_pred             EEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccCccc
Confidence            999999999999987543      1378889999999999999999999999999999999975321             


Q ss_pred             ---------------cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhh
Q 039276          167 ---------------LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMK  218 (263)
Q Consensus       167 ---------------~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~  218 (263)
                                     ..+..|+||            |||||||++|||++ |..||......  .+.....         
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~--~~~~~~~---------  235 (277)
T cd05036         167 RDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ--EVMEFVT---------  235 (277)
T ss_pred             cccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHH---------
Confidence                           012458888            99999999999997 99998642111  1111110         


Q ss_pred             hhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          219 VVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                         ..      .+...+..++.++.+++.+||+.+|++|||+.+|
T Consensus       236 ---~~------~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~v  271 (277)
T cd05036         236 ---GG------GRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATI  271 (277)
T ss_pred             ---cC------CcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHH
Confidence               00      0011233456679999999999999999999874

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=100.00  E-value=2.4e-34  Score=236.76  Aligned_cols=212  Identities=20%  Similarity=0.349  Sum_probs=167.2

Q ss_pred             ccccccceecccCceEEEEEEec-CC---ceEEEEEeecC-CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ-DG---MEVVVKGFNLQ-YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALI  106 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~-~~---~~v~vK~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv  106 (263)
                      ..|+..+.||+|+||.||+|... ++   ..|++|.+... .......+..|+.+++.++|||++++.+++.+++..+++
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv   83 (269)
T cd05065           4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII   83 (269)
T ss_pred             HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence            34888999999999999999843 33   35999998765 233456788999999999999999999999998899999


Q ss_pred             EeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc--------------------
Q 039276          107 LECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT--------------------  166 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~--------------------  166 (263)
                      +||+++++|.+++......+++..+..++.|++.||+|||+++++|+||+|+||+.+...                    
T Consensus        84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~  163 (269)
T cd05065          84 TEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDP  163 (269)
T ss_pred             EecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccCcccc
Confidence            999999999999987555588999999999999999999999999999999999854321                    


Q ss_pred             -----c---ccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhccc
Q 039276          167 -----L---ATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLL  225 (263)
Q Consensus       167 -----~---g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (263)
                           .   .+..|+||            |||||||+++|+++ |..||......  .......            .   
T Consensus       164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~--~~~~~i~------------~---  226 (269)
T cd05065         164 TYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ--DVINAIE------------Q---  226 (269)
T ss_pred             ccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH--HHHHHHH------------c---
Confidence                 0   12358888            99999999999886 99998642111  1111110            0   


Q ss_pred             ccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          226 SREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       226 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                         ..+.+.+..++..+.+++.+||+.+|++||++.+|
T Consensus       227 ---~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i  261 (269)
T cd05065         227 ---DYRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQI  261 (269)
T ss_pred             ---CCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence               01112234556778999999999999999999764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=100.00  E-value=3.7e-34  Score=236.30  Aligned_cols=213  Identities=23%  Similarity=0.388  Sum_probs=166.7

Q ss_pred             ccccccceecccCceEEEEEEec------CCceEEEEEeecCCCc-hHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ------DGMEVVVKGFNLQYGG-AFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKA  104 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~------~~~~v~vK~~~~~~~~-~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~  104 (263)
                      .+|+....||.|+||.||+|+..      +...+++|.+...... ..+.+.+|++++++++|+|++++++++.+.+..+
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   84 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY   84 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence            45888999999999999999853      2467899988765444 4677889999999999999999999998888999


Q ss_pred             EEEeccCCCCHhhhhhhCC--------CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc----------
Q 039276          105 LILECMPHGSLGKCLSTSN--------YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT----------  166 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~--------~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~----------  166 (263)
                      ++|||+++++|.+++....        ..+++..+..++.|++.||+|||+.+++|+||||+||+.....          
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~~~  164 (275)
T cd05046          85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLSLS  164 (275)
T ss_pred             EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEcccccc
Confidence            9999999999999997544        1378999999999999999999999999999999999954321          


Q ss_pred             --------------cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhh
Q 039276          167 --------------LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKV  219 (263)
Q Consensus       167 --------------~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~  219 (263)
                                    .++..|+||            ||||||+++++|++ |..||...... ..+.....          
T Consensus       165 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~-~~~~~~~~----------  233 (275)
T cd05046         165 KDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE-EVLNRLQA----------  233 (275)
T ss_pred             cccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH-HHHHHHHc----------
Confidence                          224458888            99999999999999 88898532111 11110000          


Q ss_pred             hhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          220 VSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                        ..      ...+.+..++..+.+++.+||+.+|++|||+.|+
T Consensus       234 --~~------~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~  269 (275)
T cd05046         234 --GK------LELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSEL  269 (275)
T ss_pred             --CC------cCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHH
Confidence              00      0011123455679999999999999999999864

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=4e-34  Score=237.35  Aligned_cols=223  Identities=17%  Similarity=0.216  Sum_probs=171.1

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      .+|+..+.||+|++|.||++.. .++..+++|++.... ....+.+.+|+++++.++|+|++++++.+...+..++++||
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF   84 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence            3588999999999999999984 458889999887553 33466788999999999999999999999999999999999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhcc-CCccccccCCCccccccc---------------------cc
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHF-GHSTHLLLKEDQSLTQIQ---------------------TL  167 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~-~~i~h~dlk~~nil~~~~---------------------~~  167 (263)
                      +++++|.+++...+. +++..+..++.+++.+|.|||+ .+++|+||+|+||+....                     ..
T Consensus        85 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~~~~~  163 (284)
T cd06620          85 MDCGSLDRIYKKGGP-IPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADTFV  163 (284)
T ss_pred             CCCCCHHHHHHhccC-CCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhccCccc
Confidence            999999998876543 7889999999999999999997 589999999999994421                     24


Q ss_pred             ccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccch
Q 039276          168 ATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTK  235 (263)
Q Consensus       168 g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (263)
                      |+..|+||            |||||||+++++++|+.||.........      .................. ... ...
T Consensus       164 ~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~------~~~~~~~~~~~~~~~~~~-~~~-~~~  235 (284)
T cd06620         164 GTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDG------QDDPMGILDLLQQIVQEP-PPR-LPS  235 (284)
T ss_pred             cCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhh------hhhhhHHHHHHHHHhhcc-CCC-CCc
Confidence            67889999            9999999999999999999754221110      000000111111111000 000 011


Q ss_pred             HHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          236 EQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       236 ~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ..++.++.+++.+||+.||++|||+.||
T Consensus       236 ~~~~~~~~~li~~~l~~dp~~Rpt~~e~  263 (284)
T cd06620         236 SDFPEDLRDFVDACLLKDPTERPTPQQL  263 (284)
T ss_pred             hhcCHHHHHHHHHHhcCCcccCcCHHHH
Confidence            2356679999999999999999999874

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=100.00  E-value=5.5e-34  Score=232.85  Aligned_cols=211  Identities=19%  Similarity=0.270  Sum_probs=166.4

Q ss_pred             cccccceecccCceEEEEEE-ecCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeec-CCeeEEEEe
Q 039276           33 LFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSK-DDFKALILE  108 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~lv~e  108 (263)
                      +|+..+.+|.|++|.||.+. ..+++.+++|.+....  ....+.+.+|+++++.++|+|++++.+.+.. ....++++|
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e   80 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG   80 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence            38889999999999999998 4457899999997653  2345567889999999999999999988753 456899999


Q ss_pred             ccCCCCHhhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc----------------------
Q 039276          109 CMPHGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ----------------------  165 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~----------------------  165 (263)
                      |+++++|.+++.... ..+++.++..++.+++.|+++||+.+++|+||+|+||+.+..                      
T Consensus        81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~  160 (257)
T cd08223          81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMAS  160 (257)
T ss_pred             ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccCCccc
Confidence            999999999987643 338899999999999999999999999999999999984321                      


Q ss_pred             -ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccc
Q 039276          166 -TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHF  232 (263)
Q Consensus       166 -~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (263)
                       ..+++.|+||            |||||||++++|++|+.||....... ........            ..       .
T Consensus       161 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~-~~~~~~~~------------~~-------~  220 (257)
T cd08223         161 TLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNS-LVYRIIEG------------KL-------P  220 (257)
T ss_pred             cccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHhc------------CC-------C
Confidence             2467789999            99999999999999999986321110 00001000            00       0


Q ss_pred             cchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          233 MTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       233 ~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ..+...++++.+++.+|++.+|++|||+.++
T Consensus       221 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~  251 (257)
T cd08223         221 PMPKDYSPELGELIATMLSKRPEKRPSVKSI  251 (257)
T ss_pred             CCccccCHHHHHHHHHHhccCcccCCCHHHH
Confidence            1123456679999999999999999999764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=100.00  E-value=3.7e-34  Score=233.65  Aligned_cols=211  Identities=20%  Similarity=0.314  Sum_probs=169.0

Q ss_pred             cccccceecccCceEEEEEEe-cCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           33 LFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      +|+..+.||+|++|.||++.. .++..+++|.+....  ......+.+|+++++.++|+|++++++.+...+..++++||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY   80 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence            378899999999999999984 568899999997652  23456788899999999999999999999888899999999


Q ss_pred             cCCCCHhhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------
Q 039276          110 MPHGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------  165 (263)
Q Consensus       110 ~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------  165 (263)
                      +++++|.+++.... ..+++..+..++.+++.+|+|||+++++|+||+|+||+.+..                       
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~  160 (256)
T cd08220          81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAYT  160 (256)
T ss_pred             CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCccccc
Confidence            99999999997643 337888999999999999999999999999999999996421                       


Q ss_pred             ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccccc
Q 039276          166 TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFM  233 (263)
Q Consensus       166 ~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (263)
                      ..++..|+||            ||||||+++++|++|+.||......  ..   .        ......       ...+
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~--~~---~--------~~~~~~-------~~~~  220 (256)
T cd08220         161 VVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP--AL---V--------LKIMSG-------TFAP  220 (256)
T ss_pred             cccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchH--HH---H--------HHHHhc-------CCCC
Confidence            2356679999            9999999999999999998532110  00   0        000000       0011


Q ss_pred             chHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          234 TKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       234 ~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .+..++.++.+++.+||+.+|++|||++|+
T Consensus       221 ~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l  250 (256)
T cd08220         221 ISDRYSPDLRQLILSMLNLDPSKRPQLSQI  250 (256)
T ss_pred             CCCCcCHHHHHHHHHHccCChhhCCCHHHH
Confidence            233456679999999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=100.00  E-value=3.3e-34  Score=236.07  Aligned_cols=210  Identities=21%  Similarity=0.354  Sum_probs=165.3

Q ss_pred             cccccceecccCceEEEEEEecC----CceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           33 LFSESNLISRGGFGSIYKAKIQD----GMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~~~----~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      +|...+.||+|+||.||+|...+    ...|++|...... ....+.+.+|+.+++.++|+|++++++++.+. ..+++|
T Consensus         7 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-~~~lv~   85 (270)
T cd05056           7 DITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITEN-PVWIVM   85 (270)
T ss_pred             hceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcCC-CcEEEE
Confidence            48888999999999999998532    3468899887664 34566788999999999999999999988764 578999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc---------------------
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT---------------------  166 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~---------------------  166 (263)
                      ||+++++|.+++......+++..+..++.|++.||+|||+.+++|+||+|+||+.....                     
T Consensus        86 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~  165 (270)
T cd05056          86 ELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYKA  165 (270)
T ss_pred             EcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeecccccceec
Confidence            99999999999987555589999999999999999999999999999999999854321                     


Q ss_pred             ---cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccc
Q 039276          167 ---LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDE  230 (263)
Q Consensus       167 ---~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (263)
                         .++..|+||            |||||||+++|+++ |..||......+. .... .                  ...
T Consensus       166 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~-~~~~-~------------------~~~  225 (270)
T cd05056         166 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDV-IGRI-E------------------NGE  225 (270)
T ss_pred             CCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHH-HHHH-H------------------cCC
Confidence               123568898            99999999999996 9999864321110 1100 0                  000


Q ss_pred             cccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          231 HFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       231 ~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +.+.+..++.++.+++.+|+..+|++|||+.++
T Consensus       226 ~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~  258 (270)
T cd05056         226 RLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTEL  258 (270)
T ss_pred             cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence            111234566779999999999999999999764

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=100.00  E-value=2.7e-34  Score=237.50  Aligned_cols=213  Identities=18%  Similarity=0.307  Sum_probs=164.1

Q ss_pred             cccccccceecccCceEEEEEEec------CCceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCee
Q 039276           31 LFLFSESNLISRGGFGSIYKAKIQ------DGMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFK  103 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~~------~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~  103 (263)
                      .++|+..+.||+|++|.||+|...      .+..+++|.+.... ......+.+|+.+++.++|+|++++++++.+.+..
T Consensus         5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~   84 (277)
T cd05062           5 REKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT   84 (277)
T ss_pred             HHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCe
Confidence            345999999999999999998743      24679999886542 23455678899999999999999999999988999


Q ss_pred             EEEEeccCCCCHhhhhhhCCC---------cccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc--------
Q 039276          104 ALILECMPHGSLGKCLSTSNY---------ILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT--------  166 (263)
Q Consensus       104 ~lv~e~~~~~~L~~~l~~~~~---------~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~--------  166 (263)
                      ++++||+++++|.+++.....         ..++..+..++.|++.||+|||+.+++|+||||+||+.+...        
T Consensus        85 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~dfg  164 (277)
T cd05062          85 LVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFG  164 (277)
T ss_pred             EEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEECCCC
Confidence            999999999999999865321         145677888999999999999999999999999999955321        


Q ss_pred             -----------------cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCch
Q 039276          167 -----------------LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSV  216 (263)
Q Consensus       167 -----------------~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~  216 (263)
                                       .+++.|+||            |||||||++|||++ |..||.....  .......        
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~--~~~~~~~--------  234 (277)
T cd05062         165 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN--EQVLRFV--------  234 (277)
T ss_pred             CccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHH--------
Confidence                             224569999            99999999999999 7888753211  1111000        


Q ss_pred             hhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          217 MKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                         ....       ....+..+++.+.+++.+||+.+|++|||+.|+
T Consensus       235 ---~~~~-------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~  271 (277)
T cd05062         235 ---MEGG-------LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEI  271 (277)
T ss_pred             ---HcCC-------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence               0000       001133456679999999999999999999874

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=100.00  E-value=3.8e-34  Score=235.74  Aligned_cols=213  Identities=20%  Similarity=0.274  Sum_probs=165.1

Q ss_pred             cccccccceecccCceEEEEEE-ecCCceEEEEEeecCCCchHHHHHHHHHHHhhc-CCCcceeEeeEeecC------Ce
Q 039276           31 LFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKII-RHQNLIKIISSCSKD------DF  102 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~------~~  102 (263)
                      .+.|+..+.||+|+||.||.|. ..+++.+++|.+.... .....+.+|+.+++.+ +|+|++++++.+...      ..
T Consensus         5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~   83 (272)
T cd06637           5 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQ   83 (272)
T ss_pred             hhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcE
Confidence            3458889999999999999998 4568899999987653 3445678899999988 799999999998642      35


Q ss_pred             eEEEEeccCCCCHhhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc----------------
Q 039276          103 KALILECMPHGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ----------------  165 (263)
Q Consensus       103 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~----------------  165 (263)
                      .++++||+++++|.+++.... ..+++..+..++.|++.||+|||+++++|+|++|+||+.+..                
T Consensus        84 ~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~  163 (272)
T cd06637          84 LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR  163 (272)
T ss_pred             EEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCceeccc
Confidence            789999999999999987643 347888999999999999999999999999999999984321                


Q ss_pred             -------ccccccccCc-----------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhh
Q 039276          166 -------TLATISYMAP-----------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVS  221 (263)
Q Consensus       166 -------~~g~~~y~aP-----------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (263)
                             ..|+..|+||                 |||||||++|||++|+.||......    .......          
T Consensus       164 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~----~~~~~~~----------  229 (272)
T cd06637         164 TVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM----RALFLIP----------  229 (272)
T ss_pred             ccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHH----HHHHHHh----------
Confidence                   2356678888                 9999999999999999998642111    0000000          


Q ss_pred             hcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          222 ANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                           ....+......++.++.+++.+||+.+|.+|||+.+|
T Consensus       230 -----~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i  266 (272)
T cd06637         230 -----RNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQL  266 (272)
T ss_pred             -----cCCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHH
Confidence                 0000011122345678999999999999999999764

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.7e-34  Score=235.64  Aligned_cols=209  Identities=24%  Similarity=0.301  Sum_probs=168.4

Q ss_pred             cccccceecccCceEEEEEEe-cCCceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           33 LFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      +|+..+.||.|++|.||+|.. .++..+++|.+.... ......+.+|+++++.++|+|++++.+.+.+....++++|++
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   81 (274)
T cd06609           2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC   81 (274)
T ss_pred             hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence            588889999999999999994 468899999997653 344567788999999999999999999999989999999999


Q ss_pred             CCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------cc
Q 039276          111 PHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------TL  167 (263)
Q Consensus       111 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------~~  167 (263)
                      ++++|.+++...  .+++..+..++.|++.|+.|||+++++|+||+|+||+....                       ..
T Consensus        82 ~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~  159 (274)
T cd06609          82 GGGSCLDLLKPG--KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNTFV  159 (274)
T ss_pred             CCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeeccccccccccc
Confidence            999999999765  47899999999999999999999999999999999995432                       23


Q ss_pred             ccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccch
Q 039276          168 ATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTK  235 (263)
Q Consensus       168 g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (263)
                      ++..|+||            |||||||++|+|++|+.||....... ...             .+......      ...
T Consensus       160 ~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~-~~~-------------~~~~~~~~------~~~  219 (274)
T cd06609         160 GTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMR-VLF-------------LIPKNNPP------SLE  219 (274)
T ss_pred             CCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHH-HHH-------------HhhhcCCC------CCc
Confidence            56679999            99999999999999999986432110 000             00000000      001


Q ss_pred             H-HHHHHHHHhhccccccCcCCCCCccCC
Q 039276          236 E-QCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       236 ~-~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      . .+++++.+++.+||..+|++|||++++
T Consensus       220 ~~~~~~~~~~~l~~~l~~~p~~Rpt~~~i  248 (274)
T cd06609         220 GNKFSKPFKDFVSLCLNKDPKERPSAKEL  248 (274)
T ss_pred             ccccCHHHHHHHHHHhhCChhhCcCHHHH
Confidence            1 156679999999999999999999864

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=100.00  E-value=3.1e-34  Score=238.20  Aligned_cols=209  Identities=17%  Similarity=0.210  Sum_probs=163.8

Q ss_pred             ccccceecccCceEEEEEE-ecCCceEEEEEeecCCC---chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           34 FSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYG---GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~---~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      |+..+.||+|+||.||++. ..+++.+|+|.+.....   .....+.+|+.+++.++|++++.+.+.+.+.+..+++|||
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL   81 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence            6778889999999999998 45689999999875422   2234567899999999999999999999998999999999


Q ss_pred             cCCCCHhhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc----------------------c
Q 039276          110 MPHGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ----------------------T  166 (263)
Q Consensus       110 ~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~----------------------~  166 (263)
                      +++++|.+++.... ..+++..+..++.|++.||.|||+.+++|+||||+||+.+..                      .
T Consensus        82 ~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~  161 (285)
T cd05630          82 MNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR  161 (285)
T ss_pred             cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCccccCC
Confidence            99999999885432 348889999999999999999999999999999999985421                      2


Q ss_pred             cccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccc
Q 039276          167 LATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT  234 (263)
Q Consensus       167 ~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (263)
                      .|+..|+||            |||||||++|+|++|+.||....... .......         .... ..      ...
T Consensus       162 ~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~-~~~~~~~---------~~~~-~~------~~~  224 (285)
T cd05630         162 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI-KREEVER---------LVKE-VQ------EEY  224 (285)
T ss_pred             CCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccc-hHHHHHh---------hhhh-hh------hhc
Confidence            467889999            99999999999999999986432110 0000000         0000 00      001


Q ss_pred             hHHHHHHHHHhhccccccCcCCCCC
Q 039276          235 KEQCMSFVFNLAMECTVESPNQRIN  259 (263)
Q Consensus       235 ~~~~~~~l~~l~~~cl~~~p~~Rpt  259 (263)
                      +..+++++.+++.+||+.||++|||
T Consensus       225 ~~~~~~~~~~li~~~l~~~p~~R~s  249 (285)
T cd05630         225 SEKFSPDARSLCKMLLCKDPKERLG  249 (285)
T ss_pred             CccCCHHHHHHHHHHhhcCHHHccC
Confidence            2345667899999999999999999

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=100.00  E-value=5.5e-34  Score=241.30  Aligned_cols=226  Identities=21%  Similarity=0.270  Sum_probs=165.1

Q ss_pred             ceeccc--CceEEEEEEe-cCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccCC
Q 039276           38 NLISRG--GFGSIYKAKI-QDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPH  112 (263)
Q Consensus        38 ~~lg~g--~~g~v~~~~~-~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~  112 (263)
                      ..||+|  +|++||++.. .+++.||+|.+....  ....+.+.+|+.+++.++|+||+++++++...+..++++||+.+
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~   83 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY   83 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence            356666  8899999984 579999999987543  23456788899999999999999999999999999999999999


Q ss_pred             CCHhhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc-------------------------
Q 039276          113 GSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT-------------------------  166 (263)
Q Consensus       113 ~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~-------------------------  166 (263)
                      +++.+++.... ..+++..+..++.|++.||+|||+.+++||||||+||++....                         
T Consensus        84 ~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (328)
T cd08226          84 GSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYD  163 (328)
T ss_pred             CCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccccccc
Confidence            99999987642 2378888999999999999999999999999999999854321                         


Q ss_pred             -----cccccccCc--------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhc--------CCCchhhh
Q 039276          167 -----LATISYMAP--------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDL--------LPNSVMKV  219 (263)
Q Consensus       167 -----~g~~~y~aP--------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~--------~~~~~~~~  219 (263)
                           .++..|+||              |||||||+++||++|+.||.................        .+......
T Consensus       164 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (328)
T cd08226         164 FPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRM  243 (328)
T ss_pred             ccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhh
Confidence                 123458888              999999999999999999975432211111110000        00000000


Q ss_pred             -----------hhhc-------ccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          220 -----------VSAN-------LLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       220 -----------~~~~-------~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                                 ....       .......+.+....+++++.+++++||+.||++|||++|+
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~  305 (328)
T cd08226         244 KNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSL  305 (328)
T ss_pred             ccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHH
Confidence                       0000       0000111122345678889999999999999999999874

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=100.00  E-value=4e-34  Score=233.60  Aligned_cols=211  Identities=17%  Similarity=0.208  Sum_probs=168.8

Q ss_pred             cccccceecccCceEEEEEE-ecCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           33 LFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      +|+..+.||+|+||.+|.+. ..+++.+++|.+....  ....+.+.+|+.+++.++|+|++++.+++.+.+..++++||
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY   80 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence            38889999999999999998 4568999999997542  33455788899999999999999999999999999999999


Q ss_pred             cCCCCHhhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------
Q 039276          110 MPHGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------  165 (263)
Q Consensus       110 ~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------  165 (263)
                      +++++|.+++.... ..+++..+..++.|++.|++|||+.+++|+||+|+||+.+..                       
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~  160 (256)
T cd08218          81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELART  160 (256)
T ss_pred             CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhhh
Confidence            99999999887543 237888899999999999999999999999999999995431                       


Q ss_pred             ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccccc
Q 039276          166 TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFM  233 (263)
Q Consensus       166 ~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (263)
                      ..|+..|+||            |+|||||++++|++|+.||.....                 ...+......   ...+
T Consensus       161 ~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~-----------------~~~~~~~~~~---~~~~  220 (256)
T cd08218         161 CIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNM-----------------KNLVLKIIRG---SYPP  220 (256)
T ss_pred             ccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCH-----------------HHHHHHHhcC---CCCC
Confidence            1356778898            999999999999999999853210                 0111111000   0111


Q ss_pred             chHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          234 TKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       234 ~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .+..++.++.+++.+||+.+|++||++.+|
T Consensus       221 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~v  250 (256)
T cd08218         221 VSSHYSYDLRNLVSQLFKRNPRDRPSVNSI  250 (256)
T ss_pred             CcccCCHHHHHHHHHHhhCChhhCcCHHHH
Confidence            234556679999999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=100.00  E-value=5.6e-34  Score=236.35  Aligned_cols=229  Identities=20%  Similarity=0.221  Sum_probs=167.9

Q ss_pred             cccccceecccCceEEEEEEec-CCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           33 LFSESNLISRGGFGSIYKAKIQ-DGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~~-~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      +|+....||+|++|.||++... +++.+++|++....  ....+.+.+|+.+++.++|+|++++++.+.+....++++||
T Consensus         2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~   81 (286)
T cd07847           2 KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEY   81 (286)
T ss_pred             ceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEec
Confidence            5888999999999999999954 58999999986542  22345678899999999999999999999999999999999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------c
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------T  166 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------~  166 (263)
                      +++++|..++.... .+++..+..++.|++.||+|||+.+++|+||+|+||+.+..                       .
T Consensus        82 ~~~~~l~~~~~~~~-~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~  160 (286)
T cd07847          82 CDHTVLNELEKNPR-GVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYTDY  160 (286)
T ss_pred             cCccHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCcccccCc
Confidence            99988887765544 38999999999999999999999999999999999995432                       1


Q ss_pred             cccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCC--Cchhhhhhh------ccc
Q 039276          167 LATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLP--NSVMKVVSA------NLL  225 (263)
Q Consensus       167 ~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~------~~~  225 (263)
                      .++..|+||             |||||||++++|++|+.||......+. ..........  .......+.      ...
T Consensus       161 ~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (286)
T cd07847         161 VATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQ-LYLIRKTLGDLIPRHQQIFSTNQFFKGLSI  239 (286)
T ss_pred             ccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCChHHhhhcccccccccccC
Confidence            245678888             999999999999999999864322111 1111000000  000000000      000


Q ss_pred             ccccccc---cchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          226 SREDEHF---MTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       226 ~~~~~~~---~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +......   ......+..+.+++.+||+.+|++|||+.|+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ei  280 (286)
T cd07847         240 PEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEEL  280 (286)
T ss_pred             CCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHH
Confidence            0000000   0112446779999999999999999999764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=100.00  E-value=3.8e-34  Score=239.02  Aligned_cols=211  Identities=22%  Similarity=0.370  Sum_probs=163.2

Q ss_pred             cccccceecccCceEEEEEEec-CC--ceEEEEEeecC-CCchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCeeEEEE
Q 039276           33 LFSESNLISRGGFGSIYKAKIQ-DG--MEVVVKGFNLQ-YGGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~~-~~--~~v~vK~~~~~-~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      +|+..+.||+|+||.||+|... ++  ..+++|.++.. .....+.+.+|++++.++ +|||++++++.+.+.+..++++
T Consensus         3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~   82 (297)
T cd05089           3 DIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAI   82 (297)
T ss_pred             cceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEE
Confidence            5888999999999999999854 33  34688887643 233456788899999999 7999999999999888999999


Q ss_pred             eccCCCCHhhhhhhCC---------------CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc------
Q 039276          108 ECMPHGSLGKCLSTSN---------------YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT------  166 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~------  166 (263)
                      ||+++++|.+++....               ..+++..+..++.|++.||+|||+++++|+||||+||+++...      
T Consensus        83 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~d  162 (297)
T cd05089          83 EYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKIAD  162 (297)
T ss_pred             EecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEEECC
Confidence            9999999999986532               2367888999999999999999999999999999999964321      


Q ss_pred             ----------------cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchh
Q 039276          167 ----------------LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVM  217 (263)
Q Consensus       167 ----------------~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~  217 (263)
                                      ..+..|+||            |||||||++|||++ |..||......     .....       
T Consensus       163 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~-----~~~~~-------  230 (297)
T cd05089         163 FGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCA-----ELYEK-------  230 (297)
T ss_pred             cCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-----HHHHH-------
Confidence                            123458998            99999999999997 99998542111     11100       


Q ss_pred             hhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          218 KVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                        ....      .....+..+++++.+++.+||+.+|.+|||+++|
T Consensus       231 --~~~~------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i  268 (297)
T cd05089         231 --LPQG------YRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQI  268 (297)
T ss_pred             --HhcC------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence              0000      0111233466779999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=100.00  E-value=6e-34  Score=232.56  Aligned_cols=211  Identities=23%  Similarity=0.316  Sum_probs=168.3

Q ss_pred             cccccceecccCceEEEEEEec-CCceEEEEEeecCCC-----chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEE
Q 039276           33 LFSESNLISRGGFGSIYKAKIQ-DGMEVVVKGFNLQYG-----GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALI  106 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~~-~~~~v~vK~~~~~~~-----~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv  106 (263)
                      +|+..+.||+|++|.||+|... ++..|++|.+.....     ...+.+.+|+++++.++|+|++++++++.+....+++
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF   80 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence            3778899999999999999954 789999999876532     2456788899999999999999999999998999999


Q ss_pred             EeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc---------------------
Q 039276          107 LECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ---------------------  165 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~---------------------  165 (263)
                      +||+++++|.+++..... +++..+..++.|++.||+|||+.+++|+||+|+||+....                     
T Consensus        81 ~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~~~  159 (258)
T cd06632          81 LELVPGGSLAKLLKKYGS-FPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAK  159 (258)
T ss_pred             EEecCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceecccccccc
Confidence            999999999999976543 7888899999999999999999999999999999985321                     


Q ss_pred             -ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccc
Q 039276          166 -TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEH  231 (263)
Q Consensus       166 -~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (263)
                       ..++..|++|             |+|||||++++|++|+.||.....    .......         ..      ....
T Consensus       160 ~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~----~~~~~~~---------~~------~~~~  220 (258)
T cd06632         160 SFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG----VAAVFKI---------GR------SKEL  220 (258)
T ss_pred             ccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcH----HHHHHHH---------Hh------cccC
Confidence             2356678888             999999999999999999865321    1000000         00      0000


Q ss_pred             ccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          232 FMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       232 ~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ...+..+++++.+++.+||+.+|++|||+.++
T Consensus       221 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~  252 (258)
T cd06632         221 PPIPDHLSDEAKDFILKCLQRDPSLRPTAAEL  252 (258)
T ss_pred             CCcCCCcCHHHHHHHHHHhhcCcccCcCHHHH
Confidence            11233456778999999999999999999864

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=100.00  E-value=2.7e-34  Score=243.95  Aligned_cols=213  Identities=22%  Similarity=0.351  Sum_probs=163.5

Q ss_pred             ccccccceecccCceEEEEEEec------CCceEEEEEeecCC-CchHHHHHHHHHHHhhc-CCCcceeEeeEeec-CCe
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ------DGMEVVVKGFNLQY-GGAFKNLDVECNMMKII-RHQNLIKIISSCSK-DDF  102 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~------~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~-~~~  102 (263)
                      ++|+..+.||+|+||.||+|...      +++.|++|++.... ....+.+..|++++.++ +|+||+++++++.. ...
T Consensus         7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~   86 (337)
T cd05054           7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGP   86 (337)
T ss_pred             HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCC
Confidence            46999999999999999999632      24789999987543 23345677899999999 89999999998864 456


Q ss_pred             eEEEEeccCCCCHhhhhhhCC-----------------------------------------------------------
Q 039276          103 KALILECMPHGSLGKCLSTSN-----------------------------------------------------------  123 (263)
Q Consensus       103 ~~lv~e~~~~~~L~~~l~~~~-----------------------------------------------------------  123 (263)
                      .++++||+++++|.+++....                                                           
T Consensus        87 ~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (337)
T cd05054          87 LMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELY  166 (337)
T ss_pred             EEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHh
Confidence            889999999999999885421                                                           


Q ss_pred             -CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-------------------------ccccccccCc--
Q 039276          124 -YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-------------------------TLATISYMAP--  175 (263)
Q Consensus       124 -~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-------------------------~~g~~~y~aP--  175 (263)
                       ..+++..+..++.|++.||+|||+++++||||||+||+++..                         ..++..|+||  
T Consensus       167 ~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~  246 (337)
T cd05054         167 KEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPES  246 (337)
T ss_pred             hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHH
Confidence             136888899999999999999999999999999999985431                         1234579999  


Q ss_pred             ----------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHHHHHHHHH
Q 039276          176 ----------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFN  244 (263)
Q Consensus       176 ----------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  244 (263)
                                |||||||+++||++ |..||......+ .+...+...                  .+...+..+++++.+
T Consensus       247 ~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~-~~~~~~~~~------------------~~~~~~~~~~~~~~~  307 (337)
T cd05054         247 IFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE-EFCRRLKEG------------------TRMRAPEYATPEIYS  307 (337)
T ss_pred             hcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH-HHHHHHhcc------------------CCCCCCccCCHHHHH
Confidence                      99999999999998 999986422111 111111000                  001112345567999


Q ss_pred             hhccccccCcCCCCCccCC
Q 039276          245 LAMECTVESPNQRINAKEM  263 (263)
Q Consensus       245 l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ++.+||+.+|++||++.||
T Consensus       308 l~~~cl~~~p~~RPs~~el  326 (337)
T cd05054         308 IMLDCWHNNPEDRPTFSEL  326 (337)
T ss_pred             HHHHHccCChhhCcCHHHH
Confidence            9999999999999999874

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=100.00  E-value=4.1e-34  Score=239.39  Aligned_cols=213  Identities=21%  Similarity=0.311  Sum_probs=166.4

Q ss_pred             ccccccceecccCceEEEEEEec------CCceEEEEEeecCC-CchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCee
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ------DGMEVVVKGFNLQY-GGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFK  103 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~------~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~  103 (263)
                      .+|...+.||+|+||.||++...      .+..+++|.++... ....+.+.+|+++++++ +|+||+++++.+...+..
T Consensus        35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~  114 (302)
T cd05055          35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPI  114 (302)
T ss_pred             HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCce
Confidence            46899999999999999999731      24578999887553 33456788999999999 799999999999999999


Q ss_pred             EEEEeccCCCCHhhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc----------------
Q 039276          104 ALILECMPHGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT----------------  166 (263)
Q Consensus       104 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~----------------  166 (263)
                      ++++||+++++|.+++.... ..+++.++..++.|++.||+|||+++++|+||+|+||+.....                
T Consensus       115 ~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~  194 (302)
T cd05055         115 LVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMND  194 (302)
T ss_pred             EEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCcccccccCC
Confidence            99999999999999997543 2378999999999999999999999999999999999853211                


Q ss_pred             ---------cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcc
Q 039276          167 ---------LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANL  224 (263)
Q Consensus       167 ---------~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (263)
                               .++..|+||            |||||||++|||++ |..||......+ .+....            ....
T Consensus       195 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~-~~~~~~------------~~~~  261 (302)
T cd05055         195 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS-KFYKLI------------KEGY  261 (302)
T ss_pred             CceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH-HHHHHH------------HcCC
Confidence                     234568999            99999999999998 999986432111 111111            1000


Q ss_pred             cccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          225 LSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       225 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                            +...+...++++.+++.+||..+|++|||+.||
T Consensus       262 ------~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~el  294 (302)
T cd05055         262 ------RMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQI  294 (302)
T ss_pred             ------cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHH
Confidence                  001122345679999999999999999999874

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=100.00  E-value=1.7e-34  Score=244.21  Aligned_cols=202  Identities=22%  Similarity=0.244  Sum_probs=157.8

Q ss_pred             ceecccCceEEEEEE-ecCCceEEEEEeecCC---CchHHHHHHHHH-HHhhcCCCcceeEeeEeecCCeeEEEEeccCC
Q 039276           38 NLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY---GGAFKNLDVECN-MMKIIRHQNLIKIISSCSKDDFKALILECMPH  112 (263)
Q Consensus        38 ~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~---~~~~~~~~~e~~-~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~  112 (263)
                      +.||+|+||.||++. ..+++.+|+|++....   ......+..|.. +++.++|+||+++++.+...+..+++|||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG   80 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence            368999999999998 4568999999997542   223344455554 56778999999999999999999999999999


Q ss_pred             CCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------cccc
Q 039276          113 GSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------TLAT  169 (263)
Q Consensus       113 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------~~g~  169 (263)
                      ++|..++..... +++..+..++.|++.||+|||+++++||||||+||+.+..                       ..|+
T Consensus        81 ~~L~~~l~~~~~-~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt  159 (325)
T cd05604          81 GELFFHLQRERS-FPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCGT  159 (325)
T ss_pred             CCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcccccCC
Confidence            999988876544 8899999999999999999999999999999999995321                       2478


Q ss_pred             ccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHH
Q 039276          170 ISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQ  237 (263)
Q Consensus       170 ~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (263)
                      +.|+||            |||||||++|||++|+.||...... ..+...            .....        .....
T Consensus       160 ~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~-~~~~~~------------~~~~~--------~~~~~  218 (325)
T cd05604         160 PEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVA-EMYDNI------------LHKPL--------VLRPG  218 (325)
T ss_pred             hhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHH-HHHHHH------------HcCCc--------cCCCC
Confidence            889999            9999999999999999998642110 001111            00000        01223


Q ss_pred             HHHHHHHhhccccccCcCCCCCcc
Q 039276          238 CMSFVFNLAMECTVESPNQRINAK  261 (263)
Q Consensus       238 ~~~~l~~l~~~cl~~~p~~Rpt~~  261 (263)
                      .+..+.+++.+|++.+|.+||++.
T Consensus       219 ~~~~~~~ll~~ll~~~p~~R~~~~  242 (325)
T cd05604         219 ASLTAWSILEELLEKDRQRRLGAK  242 (325)
T ss_pred             CCHHHHHHHHHHhccCHHhcCCCC
Confidence            456688999999999999999985

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=100.00  E-value=8.7e-34  Score=235.54  Aligned_cols=211  Identities=18%  Similarity=0.237  Sum_probs=164.6

Q ss_pred             ccccceecccCceEEEEEEe-cCCceEEEEEeecCC---CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           34 FSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      |+..+.||+|+||.||++.. .+++.+|+|.+....   ......+.+|++++++++|++++.+.+.+...+..++++||
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence            66778899999999999984 568899999997542   22334567899999999999999999999988999999999


Q ss_pred             cCCCCHhhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc----------------------c
Q 039276          110 MPHGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ----------------------T  166 (263)
Q Consensus       110 ~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~----------------------~  166 (263)
                      +++++|.+++.... ..+++..+..++.|++.||.|||+++++|+||+|+||+.+..                      .
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~  161 (285)
T cd05632          82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRGR  161 (285)
T ss_pred             ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCCcccCC
Confidence            99999998886432 348999999999999999999999999999999999995321                      2


Q ss_pred             cccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccc
Q 039276          167 LATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT  234 (263)
Q Consensus       167 ~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (263)
                      .|+..|+||            |+|||||+++||++|..||....... ....+..             ......   ...
T Consensus       162 ~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~-~~~~~~~-------------~~~~~~---~~~  224 (285)
T cd05632         162 VGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKV-KREEVDR-------------RVLETE---EVY  224 (285)
T ss_pred             CCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHH-------------hhhccc---ccc
Confidence            467889999            99999999999999999986421110 0111100             000000   011


Q ss_pred             hHHHHHHHHHhhccccccCcCCCCCcc
Q 039276          235 KEQCMSFVFNLAMECTVESPNQRINAK  261 (263)
Q Consensus       235 ~~~~~~~l~~l~~~cl~~~p~~Rpt~~  261 (263)
                      +..+++++.+++.+||+.||++|||+.
T Consensus       225 ~~~~~~~~~~li~~~l~~~P~~R~~~~  251 (285)
T cd05632         225 SAKFSEEAKSICKMLLTKDPKQRLGCQ  251 (285)
T ss_pred             CccCCHHHHHHHHHHccCCHhHcCCCc
Confidence            234556689999999999999999954

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=100.00  E-value=1.6e-34  Score=249.65  Aligned_cols=162  Identities=18%  Similarity=0.324  Sum_probs=141.0

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCCCchHHHHHHHHHHHhhcC------CCcceeEeeEeecCCeeE
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIR------HQNLIKIISSCSKDDFKA  104 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~------h~~i~~~~~~~~~~~~~~  104 (263)
                      .+|+..+.||+|+||+|.+|. ..+++.||||+++... ....+-..|+.+|..++      .-|+|+++++|...++.|
T Consensus       186 ~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlc  264 (586)
T KOG0667|consen  186 YRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLC  264 (586)
T ss_pred             EEEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccccee
Confidence            578999999999999999998 5669999999998773 34455567899999886      378999999999999999


Q ss_pred             EEEeccCCCCHhhhhhhCCCc-ccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc-----------------
Q 039276          105 LILECMPHGSLGKCLSTSNYI-LDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT-----------------  166 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~-----------------  166 (263)
                      ||+|.+.. ||.++++.+... ++...+..|+.||+.||.+||..+|||+||||||||+....                 
T Consensus       265 iVfELL~~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q  343 (586)
T KOG0667|consen  265 IVFELLST-NLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQ  343 (586)
T ss_pred             eeehhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccccCC
Confidence            99999966 999999987543 88999999999999999999999999999999999954321                 


Q ss_pred             -----cccccccCc------------chhhHHHHHHHHHhCCCCCc
Q 039276          167 -----LATISYMAP------------DTYNFGIMIMETFSGKKPTI  195 (263)
Q Consensus       167 -----~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~  195 (263)
                           .=+..|+||            ||||||||++||++|.+.|.
T Consensus       344 ~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfp  389 (586)
T KOG0667|consen  344 RVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFP  389 (586)
T ss_pred             cceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccC
Confidence                 227779999            99999999999999987775

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=4.3e-34  Score=237.13  Aligned_cols=224  Identities=21%  Similarity=0.370  Sum_probs=166.2

Q ss_pred             ccccceecccCceEEEEEEe-----cCCceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecC--CeeEE
Q 039276           34 FSESNLISRGGFGSIYKAKI-----QDGMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKD--DFKAL  105 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~-----~~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~--~~~~l  105 (263)
                      |...+.||+|+||.||++..     .++..|++|.+.... ......+.+|+++++.++|+|++++.+++.+.  ...++
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (284)
T cd05079           6 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKL   85 (284)
T ss_pred             hhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEE
Confidence            78899999999999999973     347889999987553 33456788999999999999999999988764  56899


Q ss_pred             EEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc--------------------
Q 039276          106 ILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ--------------------  165 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~--------------------  165 (263)
                      ++||+++++|.+++......+++..+..++.|++.||+|||+++++|+||||+||+.+..                    
T Consensus        86 v~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~  165 (284)
T cd05079          86 IMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEY  165 (284)
T ss_pred             EEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccccCccc
Confidence            999999999999997655457899999999999999999999999999999999995322                    


Q ss_pred             ------ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhc-CCCchhhhhhhcccc
Q 039276          166 ------TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDL-LPNSVMKVVSANLLS  226 (263)
Q Consensus       166 ------~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  226 (263)
                            ..++..|+||            |||||||+++||++++.|+......   +....... ........... .  
T Consensus       166 ~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~--  239 (284)
T cd05079         166 YTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTL---FLKMIGPTHGQMTVTRLVRV-L--  239 (284)
T ss_pred             eeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccch---hhhhcccccccccHHHHHHH-H--
Confidence                  1234468888            9999999999999988774322110   00000000 00000000000 0  


Q ss_pred             cccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          227 REDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       227 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ....+.+.+..++..+.+++.+||+.+|++|||+.+|
T Consensus       240 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i  276 (284)
T cd05079         240 EEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNL  276 (284)
T ss_pred             HcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHH
Confidence            0011122234567789999999999999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=100.00  E-value=9.2e-34  Score=231.48  Aligned_cols=211  Identities=20%  Similarity=0.231  Sum_probs=169.1

Q ss_pred             cccccceecccCceEEEEEE-ecCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           33 LFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      +|+..+.+|.|+||.|+.+. ..++..+++|.+....  ......+.+|++++++++|+|++++++++.+.+..++++||
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~   80 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY   80 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence            38889999999999999998 5568899999987652  34456678999999999999999999999999999999999


Q ss_pred             cCCCCHhhhhhhC-CCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-----------------------c
Q 039276          110 MPHGSLGKCLSTS-NYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-----------------------Q  165 (263)
Q Consensus       110 ~~~~~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-----------------------~  165 (263)
                      +++++|.+++... ...+++..+..++.|++.+|+|||+.+++|+||+|+||+...                       .
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~  160 (256)
T cd08221          81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAET  160 (256)
T ss_pred             cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEcccccccccc
Confidence            9999999999765 334788899999999999999999999999999999998432                       1


Q ss_pred             ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccccc
Q 039276          166 TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFM  233 (263)
Q Consensus       166 ~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (263)
                      ..++..|+||            ||||||++++||++|..||...... ....            .+....       ..+
T Consensus       161 ~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~-~~~~------------~~~~~~-------~~~  220 (256)
T cd08221         161 VVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPL-NLVV------------KIVQGN-------YTP  220 (256)
T ss_pred             cCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHH-HHHH------------HHHcCC-------CCC
Confidence            2467788888            9999999999999999998532110 0000            000000       011


Q ss_pred             chHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          234 TKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       234 ~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ....++.++.+++.+||+.+|++|||+.++
T Consensus       221 ~~~~~~~~~~~~i~~~l~~~p~~R~s~~~l  250 (256)
T cd08221         221 VVSVYSSELISLVHSLLQQDPEKRPTADEV  250 (256)
T ss_pred             CccccCHHHHHHHHHHcccCcccCCCHHHH
Confidence            124556679999999999999999999764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=100.00  E-value=7.4e-34  Score=232.77  Aligned_cols=210  Identities=20%  Similarity=0.288  Sum_probs=164.3

Q ss_pred             ccccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccC
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMP  111 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~  111 (263)
                      ++|...+.||+|++|.||++....+..+++|.+.... ...+.+.+|+++++.++|+|++++++++.. ...+++|||++
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~   83 (260)
T cd05069           6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVSE-EPIYIVTEFMG   83 (260)
T ss_pred             HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEcC-CCcEEEEEcCC
Confidence            4588899999999999999997767789999876542 234667889999999999999999988754 46799999999


Q ss_pred             CCCHhhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc------------------------
Q 039276          112 HGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT------------------------  166 (263)
Q Consensus       112 ~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~------------------------  166 (263)
                      +++|.+++.... ..+++..+..++.|++.||+|||+.+++|+||+|+||+.+...                        
T Consensus        84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~  163 (260)
T cd05069          84 KGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGA  163 (260)
T ss_pred             CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCcccccCCC
Confidence            999999997543 3378888999999999999999999999999999999954321                        


Q ss_pred             cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccccc
Q 039276          167 LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFM  233 (263)
Q Consensus       167 ~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (263)
                      .++..|+||            |||||||++|||++ |+.||......  ........            .      ...+
T Consensus       164 ~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~~~~------------~------~~~~  223 (260)
T cd05069         164 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR--EVLEQVER------------G------YRMP  223 (260)
T ss_pred             ccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHc------------C------CCCC
Confidence            124568888            99999999999999 99998642111  11111100            0      0011


Q ss_pred             chHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          234 TKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       234 ~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .+...+..+.+++.+||..+|++||++++|
T Consensus       224 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i  253 (260)
T cd05069         224 CPQGCPESLHELMKLCWKKDPDERPTFEYI  253 (260)
T ss_pred             CCcccCHHHHHHHHHHccCCcccCcCHHHH
Confidence            233456679999999999999999999764

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.2e-34  Score=242.29  Aligned_cols=164  Identities=19%  Similarity=0.219  Sum_probs=143.3

Q ss_pred             cccccceecccCceEEEEEE-ecCCceEEEEEeecC---CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEe
Q 039276           33 LFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQ---YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      +|+..+.||+|+||.||++. ..+++.||+|++...   .....+.+.+|+.+++.++|+||+++++.+.+.+..|+|||
T Consensus         2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (331)
T cd05597           2 DFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMD   81 (331)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEe
Confidence            58889999999999999999 456899999999753   22334557789999999999999999999999999999999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------  165 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------  165 (263)
                      |+++++|.+++......+++..+..++.|++.||+|||+++++||||||+||+....                       
T Consensus        82 ~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~  161 (331)
T cd05597          82 YYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQSN  161 (331)
T ss_pred             cCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCcccc
Confidence            999999999997654458899999999999999999999999999999999984321                       


Q ss_pred             -ccccccccCc-----------------chhhHHHHHHHHHhCCCCCcc
Q 039276          166 -TLATISYMAP-----------------DTYNFGIMIMETFSGKKPTIK  196 (263)
Q Consensus       166 -~~g~~~y~aP-----------------Dv~SlG~il~ell~g~~Pf~~  196 (263)
                       ..|++.|+||                 |||||||++|||++|+.||..
T Consensus       162 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~  210 (331)
T cd05597         162 VAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYA  210 (331)
T ss_pred             ceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCC
Confidence             2478889998                 999999999999999999853

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7.1e-34  Score=239.33  Aligned_cols=208  Identities=21%  Similarity=0.294  Sum_probs=167.1

Q ss_pred             cccccceecccCceEEEEEEec-CCceEEEEEeecCCCc---hHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEe
Q 039276           33 LFSESNLISRGGFGSIYKAKIQ-DGMEVVVKGFNLQYGG---AFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~~-~~~~v~vK~~~~~~~~---~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      +|+..+.||+|++|.||++... ++..+++|.+......   ..+.+..|+++++.++|+||+++++.+.+....++++|
T Consensus         2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   81 (316)
T cd05574           2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMD   81 (316)
T ss_pred             ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEE
Confidence            4888999999999999999954 5899999999765322   45567889999999999999999999999999999999


Q ss_pred             ccCCCCHhhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc----------------------
Q 039276          109 CMPHGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ----------------------  165 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~----------------------  165 (263)
                      |+.+++|.+++.... ..+++..+..++.|++.||+|||+.+++|+||||+||+.+.+                      
T Consensus        82 ~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~  161 (316)
T cd05574          82 YCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVS  161 (316)
T ss_pred             ecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhcccccccccc
Confidence            999999999987542 348889999999999999999999999999999999996422                      


Q ss_pred             ------------------------------ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCch
Q 039276          166 ------------------------------TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMT  203 (263)
Q Consensus       166 ------------------------------~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~  203 (263)
                                                    ..|+..|+||            ||||||+++|+|++|+.||...... ..
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~-~~  240 (316)
T cd05574         162 KALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRD-ET  240 (316)
T ss_pred             cccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchH-HH
Confidence                                          1356779999            9999999999999999998643211 11


Q ss_pred             hhhHhhhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCC
Q 039276          204 LKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRIN  259 (263)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt  259 (263)
                      +...            .....      ..+.....++++.+++.+||..+|++|||
T Consensus       241 ~~~~------------~~~~~------~~~~~~~~~~~~~~li~~~l~~~p~~R~s  278 (316)
T cd05574         241 FSNI------------LKKEV------TFPGSPPVSSSARDLIRKLLVKDPSKRLG  278 (316)
T ss_pred             HHHH------------hcCCc------cCCCccccCHHHHHHHHHHccCCHhHCCC
Confidence            1111            10000      01112225677999999999999999999

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=100.00  E-value=6.3e-34  Score=261.29  Aligned_cols=211  Identities=20%  Similarity=0.256  Sum_probs=164.5

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCC---CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      ++|+..+.||+|+||.||+|.. .+++.||+|++....   ....+++.+|+++++.++|||++++++++.+++..+++|
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM   81 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM   81 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence            3589999999999999999994 458999999997542   223567889999999999999999999999999999999


Q ss_pred             eccCCCCHhhhhhhC----------CCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc------------
Q 039276          108 ECMPHGSLGKCLSTS----------NYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ------------  165 (263)
Q Consensus       108 e~~~~~~L~~~l~~~----------~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~------------  165 (263)
                      ||+++++|.+++...          ....+...+..++.|++.||+|||+++++||||||+||+.+..            
T Consensus        82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk  161 (932)
T PRK13184         82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAI  161 (932)
T ss_pred             EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcce
Confidence            999999999988642          1124556778899999999999999999999999999984321            


Q ss_pred             -----------------------------ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchh
Q 039276          166 -----------------------------TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTL  204 (263)
Q Consensus       166 -----------------------------~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~  204 (263)
                                                   ..||+.|+||            |||||||+++||++|+.||..........
T Consensus       162 ~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~  241 (932)
T PRK13184        162 FKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKISY  241 (932)
T ss_pred             ecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhh
Confidence                                         2478999999            99999999999999999986421111100


Q ss_pred             hhHhhhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCc
Q 039276          205 KHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINA  260 (263)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~  260 (263)
                      ...                 .. .+........+++.+.+++.+|+..||++||+.
T Consensus       242 ~~~-----------------i~-~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss  279 (932)
T PRK13184        242 RDV-----------------IL-SPIEVAPYREIPPFLSQIAMKALAVDPAERYSS  279 (932)
T ss_pred             hhh-----------------cc-ChhhccccccCCHHHHHHHHHHccCChhhCcCH
Confidence            000                 00 000000123456678999999999999999864

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=100.00  E-value=6.9e-34  Score=233.27  Aligned_cols=217  Identities=18%  Similarity=0.204  Sum_probs=171.5

Q ss_pred             cccccceecccCceEEEEEEe-cCCceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           33 LFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      +|+..+.||+|++|.||++.. .+++.+++|.+.... ......+.+|++.++.++|+|++++++.+...+..++++|++
T Consensus         2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   81 (265)
T cd06605           2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM   81 (265)
T ss_pred             cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence            478889999999999999995 468899999987653 234567888999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhcc-CCccccccCCCccccccc---------------------ccc
Q 039276          111 PHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHF-GHSTHLLLKEDQSLTQIQ---------------------TLA  168 (263)
Q Consensus       111 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~-~~i~h~dlk~~nil~~~~---------------------~~g  168 (263)
                      ++++|.+++......+++..+..++.|++.+|+|||+ .+++|+||+|+||+.+..                     ..+
T Consensus        82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~  161 (265)
T cd06605          82 DGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTFVG  161 (265)
T ss_pred             CCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhcccC
Confidence            9999999998764558899999999999999999999 999999999999996542                     235


Q ss_pred             cccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchH
Q 039276          169 TISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKE  236 (263)
Q Consensus       169 ~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (263)
                      +..|+||            ||||||+++++|++|+.||...............            .........  ....
T Consensus       162 ~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~------------~~~~~~~~~--~~~~  227 (265)
T cd06605         162 TSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQ------------YIVNEPPPR--LPSG  227 (265)
T ss_pred             ChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHH------------HHhcCCCCC--CChh
Confidence            6779999            9999999999999999998643221111111111            100000000  0011


Q ss_pred             HHHHHHHHhhccccccCcCCCCCccCC
Q 039276          237 QCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       237 ~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .+++++.+++.+||..+|++|||+.++
T Consensus       228 ~~~~~~~~li~~~l~~~p~~Rpt~~~l  254 (265)
T cd06605         228 KFSPDFQDFVNLCLIKDPRERPSYKEL  254 (265)
T ss_pred             hcCHHHHHHHHHHcCCCchhCcCHHHH
Confidence            267779999999999999999998764

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=100.00  E-value=5.4e-34  Score=237.73  Aligned_cols=219  Identities=19%  Similarity=0.285  Sum_probs=166.8

Q ss_pred             ccccccceecccCceEEEEEEecC-----------------CceEEEEEeecCCC-chHHHHHHHHHHHhhcCCCcceeE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQD-----------------GMEVVVKGFNLQYG-GAFKNLDVECNMMKIIRHQNLIKI   93 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~-----------------~~~v~vK~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~   93 (263)
                      .+|+..+.||+|+||.||++....                 +..|++|.+..... ...+.+.+|+++++.++|+|++++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~   84 (296)
T cd05051           5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARL   84 (296)
T ss_pred             hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence            458999999999999999987432                 24588999876532 345678889999999999999999


Q ss_pred             eeEeecCCeeEEEEeccCCCCHhhhhhhCC----------CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccc
Q 039276           94 ISSCSKDDFKALILECMPHGSLGKCLSTSN----------YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQ  163 (263)
Q Consensus        94 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~  163 (263)
                      ++++......++++|++++++|.+++....          ..+++..++.++.|++.||+|||+.+++|+||||+||+..
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili~  164 (296)
T cd05051          85 LGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLVG  164 (296)
T ss_pred             EEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhceeec
Confidence            999998889999999999999999987644          1378899999999999999999999999999999999954


Q ss_pred             cc-------------------------ccccccccCc------------chhhHHHHHHHHHh--CCCCCccccCCCchh
Q 039276          164 IQ-------------------------TLATISYMAP------------DTYNFGIMIMETFS--GKKPTIKFFHGEMTL  204 (263)
Q Consensus       164 ~~-------------------------~~g~~~y~aP------------Dv~SlG~il~ell~--g~~Pf~~~~~~~~~~  204 (263)
                      ..                         ..++..|+||            |||||||++|||++  +..||..... ...+
T Consensus       165 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~-~~~~  243 (296)
T cd05051         165 KNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTD-QQVI  243 (296)
T ss_pred             CCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcCh-HHHH
Confidence            32                         1234569999            99999999999998  6778754211 1111


Q ss_pred             hhHhhhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          205 KHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ..........            ......+.+..+++++.+++.+||+.+|++|||+.||
T Consensus       244 ~~~~~~~~~~------------~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el  290 (296)
T cd05051         244 ENAGHFFRDD------------GRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREI  290 (296)
T ss_pred             HHHHhccccc------------cccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHH
Confidence            1111000000            0000011233456779999999999999999999875

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-34  Score=252.15  Aligned_cols=226  Identities=22%  Similarity=0.281  Sum_probs=170.5

Q ss_pred             cccccceecccCceEEEEEE-ecCCceEEEEEeecC-CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCC------eeE
Q 039276           33 LFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQ-YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDD------FKA  104 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~------~~~  104 (263)
                      .+...+.||+|+||.||+|+ ..+|+.||||.++.. ....++++..|++++++++|+|||++++.-.+..      ...
T Consensus        14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~v   93 (732)
T KOG4250|consen   14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPV   93 (732)
T ss_pred             ceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccce
Confidence            36678899999999999999 677999999999765 3456888999999999999999999999875543      578


Q ss_pred             EEEeccCCCCHhhhhhhC--CCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccc-------------------
Q 039276          105 LILECMPHGSLGKCLSTS--NYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQ-------------------  163 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~-------------------  163 (263)
                      ++||||++|+|++.+++.  ..++++.+...++.+++.||.|||+++|+||||||.||++.                   
T Consensus        94 lvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Are  173 (732)
T KOG4250|consen   94 LVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARE  173 (732)
T ss_pred             EEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeeccccccc
Confidence            999999999999999863  34599999999999999999999999999999999999932                   


Q ss_pred             -------ccccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCC--chhhhHhhhcCCCchhhhhh
Q 039276          164 -------IQTLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGE--MTLKHWVNDLLPNSVMKVVS  221 (263)
Q Consensus       164 -------~~~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~  221 (263)
                             ...+||..|++|             |.|||||++|++.||..||..+....  ...........+..+...+.
T Consensus       174 l~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i~~~  253 (732)
T KOG4250|consen  174 LDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAIGAQ  253 (732)
T ss_pred             CCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeEeee
Confidence                   234799999999             99999999999999999998653221  11111111111221211111


Q ss_pred             hccc--ccccccccch----HHHHHHHHHhhccccccCcCCCC
Q 039276          222 ANLL--SREDEHFMTK----EQCMSFVFNLAMECTVESPNQRI  258 (263)
Q Consensus       222 ~~~~--~~~~~~~~~~----~~~~~~l~~l~~~cl~~~p~~Rp  258 (263)
                      ....  .+.....|.+    +.....+..++..+|..+|.+|.
T Consensus       254 ~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~  296 (732)
T KOG4250|consen  254 EEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRG  296 (732)
T ss_pred             cccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhC
Confidence            1111  1111122222    33444567788888899998886

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=100.00  E-value=4.1e-34  Score=244.60  Aligned_cols=228  Identities=19%  Similarity=0.165  Sum_probs=164.0

Q ss_pred             cccccccceecccCceEEEEEE-ecCCceEEEEEeecC--CCchHHHHHHHHHHHhhcCCCcceeEeeEeecC------C
Q 039276           31 LFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQ--YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKD------D  101 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~------~  101 (263)
                      ..+|+..+.||+|+||.||++. ...++.+|+|.+...  .......+.+|+.+++.++|+||+++++++...      .
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~   95 (355)
T cd07874          16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQ   95 (355)
T ss_pred             hhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccc
Confidence            4579999999999999999998 446889999998754  233456677899999999999999999988543      3


Q ss_pred             eeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc----------------
Q 039276          102 FKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ----------------  165 (263)
Q Consensus       102 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~----------------  165 (263)
                      ..+++|||+.+ ++.+.+..   .++...+..++.|++.||+|||+++++||||||+||++..+                
T Consensus        96 ~~~lv~e~~~~-~l~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~  171 (355)
T cd07874          96 DVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT  171 (355)
T ss_pred             eeEEEhhhhcc-cHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCCC
Confidence            57999999965 77776653   27888899999999999999999999999999999995432                


Q ss_pred             ------ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCC----------Cchh
Q 039276          166 ------TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLP----------NSVM  217 (263)
Q Consensus       166 ------~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~----------~~~~  217 (263)
                            ..|+..|+||            |||||||++|+|++|+.||...... ..+.........          ....
T Consensus       172 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (355)
T cd07874         172 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI-DQWNKVIEQLGTPCPEFMKKLQPTVR  250 (355)
T ss_pred             ccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHHhhcHHHH
Confidence                  2467889999            9999999999999999998642111 111111110000          0000


Q ss_pred             hhhhhc----------cccc--ccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          218 KVVSAN----------LLSR--EDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       218 ~~~~~~----------~~~~--~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ......          ....  .+.........+.++.+++.+||+.||++|||+.|+
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~el  308 (355)
T cd07874         251 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEA  308 (355)
T ss_pred             HHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHH
Confidence            000000          0000  000001122345678999999999999999999874

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=100.00  E-value=1.3e-33  Score=235.01  Aligned_cols=232  Identities=18%  Similarity=0.222  Sum_probs=166.7

Q ss_pred             cccccccceecccCceEEEEEE-ecCCceEEEEEeecCCC-chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEe
Q 039276           31 LFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYG-GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      +.+|...+.||+|+||.||+|. ..++..+++|.+..... .....+.+|+++++.++|+|++++.+++.+.+..++++|
T Consensus         4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e   83 (291)
T cd07870           4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFE   83 (291)
T ss_pred             cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEe
Confidence            4569999999999999999998 45688999999875532 223456789999999999999999999999889999999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------  165 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------  165 (263)
                      |+. +++.+++......+++..+..++.|++.||+|||+.+++|+||||+||+.+..                       
T Consensus        84 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~  162 (291)
T cd07870          84 YMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYSS  162 (291)
T ss_pred             ccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCCCCCCC
Confidence            996 58877776544447788888999999999999999999999999999985321                       


Q ss_pred             ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcC-CC-chhhhhhh------cc
Q 039276          166 TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLL-PN-SVMKVVSA------NL  224 (263)
Q Consensus       166 ~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~------~~  224 (263)
                      ..++..|+||             |||||||++++|++|+.||.........+........ +. ........      ..
T Consensus       163 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (291)
T cd07870         163 EVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEW  242 (291)
T ss_pred             ccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchh
Confidence            1246678888             9999999999999999999743322122221111110 00 00000000      00


Q ss_pred             ccc-ccccc---cchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          225 LSR-EDEHF---MTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       225 ~~~-~~~~~---~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ... .....   ......+.++.+++.+|+..||++|||+.|+
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~  285 (291)
T cd07870         243 FLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDA  285 (291)
T ss_pred             ccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHH
Confidence            000 00000   0000124568899999999999999999864

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=100.00  E-value=4.5e-34  Score=237.97  Aligned_cols=212  Identities=24%  Similarity=0.397  Sum_probs=164.8

Q ss_pred             ccccccceecccCceEEEEEEec------CCceEEEEEeecCC-CchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCee
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ------DGMEVVVKGFNLQY-GGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFK  103 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~------~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~  103 (263)
                      .+|+..+.||+|++|.||++...      ....+++|.+.... ......+.+|+++++++ +|+|++++++++...+..
T Consensus        12 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~   91 (293)
T cd05053          12 DRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPL   91 (293)
T ss_pred             hHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCe
Confidence            45888999999999999999853      23678999887542 23445678899999999 899999999999998899


Q ss_pred             EEEEeccCCCCHhhhhhhC---------------CCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc--
Q 039276          104 ALILECMPHGSLGKCLSTS---------------NYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT--  166 (263)
Q Consensus       104 ~lv~e~~~~~~L~~~l~~~---------------~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~--  166 (263)
                      +++|||+++++|.+++...               ...+++..++.++.|++.||+|||+.+++|+||||+||+.....  
T Consensus        92 ~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~~~~  171 (293)
T cd05053          92 YVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTEDHVM  171 (293)
T ss_pred             EEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcCCCeE
Confidence            9999999999999998642               23378889999999999999999999999999999999843211  


Q ss_pred             -----------------------cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhh
Q 039276          167 -----------------------LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVND  210 (263)
Q Consensus       167 -----------------------~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~  210 (263)
                                             .++..|+||            |||||||++|||++ |..||......     ...  
T Consensus       172 kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-----~~~--  244 (293)
T cd05053         172 KIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE-----ELF--  244 (293)
T ss_pred             EeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHH-----HHH--
Confidence                                   234569999            99999999999997 99997532110     000  


Q ss_pred             cCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          211 LLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                             ......      .....+..++.++.+++.+||..+|++|||+.||
T Consensus       245 -------~~~~~~------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ei  284 (293)
T cd05053         245 -------KLLKEG------YRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQL  284 (293)
T ss_pred             -------HHHHcC------CcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHH
Confidence                   000000      0111233456679999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=100.00  E-value=3.5e-34  Score=236.80  Aligned_cols=210  Identities=22%  Similarity=0.283  Sum_probs=167.2

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      ..|+..+.||+|+||.||+|.. .++..|++|.+.... ....+.+.+|+++++.++|+|++++++.+......++++||
T Consensus         4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (277)
T cd06642           4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEY   83 (277)
T ss_pred             HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEc
Confidence            3478889999999999999984 457889999987553 34456788999999999999999999999999999999999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------c
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------T  166 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------~  166 (263)
                      +++++|.+++...  .+++..+..++.|++.|+.|||+++++|+||+|+||+....                       .
T Consensus        84 ~~~~~L~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~  161 (277)
T cd06642          84 LGGGSALDLLKPG--PLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTF  161 (277)
T ss_pred             cCCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcchhhhcc
Confidence            9999999988653  37888999999999999999999999999999999985422                       1


Q ss_pred             cccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccc
Q 039276          167 LATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT  234 (263)
Q Consensus       167 ~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (263)
                      .++..|+||            |||||||+++||++|+.||........  ...            .....      ....
T Consensus       162 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~--~~~------------~~~~~------~~~~  221 (277)
T cd06642         162 VGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV--LFL------------IPKNS------PPTL  221 (277)
T ss_pred             cCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhH--Hhh------------hhcCC------CCCC
Confidence            356678999            999999999999999999764211110  000            00000      0011


Q ss_pred             hHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          235 KEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       235 ~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ...++.++.+++.+||+.+|++|||+.+|
T Consensus       222 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~i  250 (277)
T cd06642         222 EGQYSKPFKEFVEACLNKDPRFRPTAKEL  250 (277)
T ss_pred             CcccCHHHHHHHHHHccCCcccCcCHHHH
Confidence            22455678999999999999999999864

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=100.00  E-value=3.8e-34  Score=237.26  Aligned_cols=211  Identities=22%  Similarity=0.401  Sum_probs=164.6

Q ss_pred             cccccceecccCceEEEEEEec------CCceEEEEEeecCCCc-hHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEE
Q 039276           33 LFSESNLISRGGFGSIYKAKIQ------DGMEVVVKGFNLQYGG-AFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKAL  105 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~~------~~~~v~vK~~~~~~~~-~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l  105 (263)
                      +|+..+.||+|+||.||+|...      .+..||+|++...... ....+..|+.++..++|+||+++++.+.+....++
T Consensus         6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~   85 (283)
T cd05091           6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM   85 (283)
T ss_pred             HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence            4888899999999999999843      2478999999765432 34567889999999999999999999998889999


Q ss_pred             EEeccCCCCHhhhhhhC---------------CCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----
Q 039276          106 ILECMPHGSLGKCLSTS---------------NYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----  165 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~---------------~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----  165 (263)
                      ++||+++++|.+++...               ...+++..+..++.|++.||+|||+++++||||||+||+....     
T Consensus        86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~kl  165 (283)
T cd05091          86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNVKI  165 (283)
T ss_pred             EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCCCceEe
Confidence            99999999999988532               1226778889999999999999999999999999999984321     


Q ss_pred             --------------------ccccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcC
Q 039276          166 --------------------TLATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLL  212 (263)
Q Consensus       166 --------------------~~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~  212 (263)
                                          ..+++.|+||            |||||||+++||++ |..||.....  ..+.....   
T Consensus       166 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~--~~~~~~i~---  240 (283)
T cd05091         166 SDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN--QDVIEMIR---  240 (283)
T ss_pred             cccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHH---
Confidence                                1235679999            99999999999998 8888754211  11111100   


Q ss_pred             CCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          213 PNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                              ...       ..+.+..+++.+.+++.+||+.+|.+||++.+|
T Consensus       241 --------~~~-------~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i  276 (283)
T cd05091         241 --------NRQ-------VLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDI  276 (283)
T ss_pred             --------cCC-------cCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHH
Confidence                    000       011234567779999999999999999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=3.1e-34  Score=244.23  Aligned_cols=228  Identities=18%  Similarity=0.197  Sum_probs=163.7

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecC------Ce
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKD------DF  102 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~------~~  102 (263)
                      ++|...+.||+|+||.||+|. ..++..||+|.+....  ......+.+|+++++.++|+||+++++++...      ..
T Consensus        15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   94 (343)
T cd07878          15 ERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNE   94 (343)
T ss_pred             hhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCc
Confidence            469999999999999999998 4568899999987542  22345677899999999999999999887533      34


Q ss_pred             eEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------
Q 039276          103 KALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------  165 (263)
Q Consensus       103 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------  165 (263)
                      .++++|++ +++|.+++...  .+++..+..++.|++.||+|||+++++||||||+||+....                 
T Consensus        95 ~~~~~~~~-~~~l~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~  171 (343)
T cd07878          95 VYLVTNLM-GADLNNIVKCQ--KLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADDE  171 (343)
T ss_pred             EEEEeecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceecCCC
Confidence            68999987 67998887643  38899999999999999999999999999999999995432                 


Q ss_pred             ---ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCC--chhhhhhhc----
Q 039276          166 ---TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPN--SVMKVVSAN----  223 (263)
Q Consensus       166 ---~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~----  223 (263)
                         ..|+..|+||             |||||||++|+|++|+.||..... ...+..+.......  .....+...    
T Consensus       172 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (343)
T cd07878         172 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDY-IDQLKRIMEVVGTPSPEVLKKISSEHARK  250 (343)
T ss_pred             cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCH-HHHHHHHHHHhCCCCHHHHHhcchhhHHH
Confidence               2468889999             999999999999999999864211 11111111111000  000000000    


Q ss_pred             ccccccccc-----cchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          224 LLSREDEHF-----MTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       224 ~~~~~~~~~-----~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .....+...     ......++.+.+++.+||+.||.+|||+.|+
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~el  295 (343)
T cd07878         251 YIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEA  295 (343)
T ss_pred             HhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHH
Confidence            000000000     0012344568899999999999999999874

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=100.00  E-value=1.2e-33  Score=269.91  Aligned_cols=219  Identities=27%  Similarity=0.419  Sum_probs=169.6

Q ss_pred             cccccceecccCceEEEEEEe-cCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccC
Q 039276           33 LFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMP  111 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~  111 (263)
                      .+...+.+|+|+||.||+|.. .++..||+|.+......    ...|++.+++++||||+++++++.+.+..++||||++
T Consensus       691 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~  766 (968)
T PLN00113        691 SLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIE  766 (968)
T ss_pred             hCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCC
Confidence            356677899999999999994 57899999998654321    1246888999999999999999999889999999999


Q ss_pred             CCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhc---cCCccccccCCCccccccc------------------ccccc
Q 039276          112 HGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLH---FGHSTHLLLKEDQSLTQIQ------------------TLATI  170 (263)
Q Consensus       112 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~h~dlk~~nil~~~~------------------~~g~~  170 (263)
                      +|+|.+++..    +++..+..++.|++.||+|||   ..+++|||+||+||+.+..                  ..++.
T Consensus       767 ~g~L~~~l~~----l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~t~  842 (968)
T PLN00113        767 GKNLSEVLRN----LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLRLSLPGLLCTDTKCFISS  842 (968)
T ss_pred             CCcHHHHHhc----CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEEeccccccccCCCccccc
Confidence            9999999963    788899999999999999999   6699999999999995432                  23468


Q ss_pred             cccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCC-CchhhhhhhcccccccccccchHH
Q 039276          171 SYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLP-NSVMKVVSANLLSREDEHFMTKEQ  237 (263)
Q Consensus       171 ~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  237 (263)
                      .|+||            |||||||++|||++|+.||+........+..|...... .....+.+.....    .......
T Consensus       843 ~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~  918 (968)
T PLN00113        843 AYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRG----DVSVNQN  918 (968)
T ss_pred             cccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccC----CCCccHH
Confidence            89999            99999999999999999996544444444444432221 1122222222211    1122344


Q ss_pred             HHHHHHHhhccccccCcCCCCCccCC
Q 039276          238 CMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       238 ~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ...++.+++.+||+.+|++||||+||
T Consensus       919 ~~~~~~~l~~~Cl~~~P~~RPt~~ev  944 (968)
T PLN00113        919 EIVEVMNLALHCTATDPTARPCANDV  944 (968)
T ss_pred             HHHHHHHHHHhhCcCCchhCcCHHHH
Confidence            55678999999999999999999875

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=100.00  E-value=5.8e-34  Score=238.60  Aligned_cols=211  Identities=24%  Similarity=0.403  Sum_probs=161.9

Q ss_pred             cccccceecccCceEEEEEEec-CCc--eEEEEEeecCC-CchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCeeEEEE
Q 039276           33 LFSESNLISRGGFGSIYKAKIQ-DGM--EVVVKGFNLQY-GGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~~-~~~--~v~vK~~~~~~-~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      +|+..+.||+|+||.||+|.+. ++.  .+++|.+.... ......+.+|++++.++ +|+|++++++++.+.+..++++
T Consensus         8 ~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~   87 (303)
T cd05088           8 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAI   87 (303)
T ss_pred             hceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEEE
Confidence            4888899999999999999853 444  45777665432 23345677899999999 8999999999999999999999


Q ss_pred             eccCCCCHhhhhhhCC---------------CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc------
Q 039276          108 ECMPHGSLGKCLSTSN---------------YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT------  166 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~------  166 (263)
                      ||+++++|.+++....               ..+++..++.++.|++.||+|||+++++|+||||+||+.+...      
T Consensus        88 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~kl~d  167 (303)
T cd05088          88 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIAD  167 (303)
T ss_pred             EeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCCcEEeCc
Confidence            9999999999986432               1367888999999999999999999999999999999964321      


Q ss_pred             ----------------cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchh
Q 039276          167 ----------------LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVM  217 (263)
Q Consensus       167 ----------------~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~  217 (263)
                                      .++..|+||            |||||||+++||+| |..||......  .....          
T Consensus       168 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~----------  235 (303)
T cd05088         168 FGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--ELYEK----------  235 (303)
T ss_pred             cccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH--HHHHH----------
Confidence                            124458888            99999999999998 99998532111  00000          


Q ss_pred             hhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          218 KVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                        ....      .+...+..+++++.+++.+||+.+|++||+++++
T Consensus       236 --~~~~------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i  273 (303)
T cd05088         236 --LPQG------YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQI  273 (303)
T ss_pred             --HhcC------CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence              0000      0011123356678999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=100.00  E-value=1e-33  Score=242.99  Aligned_cols=163  Identities=20%  Similarity=0.213  Sum_probs=137.8

Q ss_pred             ccccccccceecccCceEEEEEE-ecCCceEEEEEeecC--CCchHHHHHHHHHHHhhcCCCcceeEeeEeecC------
Q 039276           30 GLFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQ--YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKD------  100 (263)
Q Consensus        30 ~~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~------  100 (263)
                      ...+|...+.||+|+||.||++. ...++.||+|++...  .....+.+.+|+.+++.++|+||+++++.+...      
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~  101 (364)
T cd07875          22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF  101 (364)
T ss_pred             hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence            34679999999999999999998 445889999999754  233456778899999999999999999987543      


Q ss_pred             CeeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc---------------
Q 039276          101 DFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ---------------  165 (263)
Q Consensus       101 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~---------------  165 (263)
                      ...|+||||+++ +|.+++..   .++...+..++.|++.||+|||+++++||||||+||+....               
T Consensus       102 ~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~  177 (364)
T cd07875         102 QDVYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG  177 (364)
T ss_pred             CeEEEEEeCCCC-CHHHHHHh---cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccC
Confidence            357999999976 78777753   27788889999999999999999999999999999995421               


Q ss_pred             -------ccccccccCc------------chhhHHHHHHHHHhCCCCCcc
Q 039276          166 -------TLATISYMAP------------DTYNFGIMIMETFSGKKPTIK  196 (263)
Q Consensus       166 -------~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~  196 (263)
                             ..|+..|+||            |||||||++|+|++|+.||..
T Consensus       178 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~  227 (364)
T cd07875         178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG  227 (364)
T ss_pred             CCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCC
Confidence                   2568889999            999999999999999999964

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=100.00  E-value=7.2e-34  Score=235.31  Aligned_cols=211  Identities=21%  Similarity=0.327  Sum_probs=161.1

Q ss_pred             ccccccceecccCceEEEEEEec-CCc----eEEEEEeecCCC-chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ-DGM----EVVVKGFNLQYG-GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKAL  105 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~-~~~----~v~vK~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l  105 (263)
                      .+|+..+.||+|+||.||+|.+. ++.    ++++|.+..... .....+..|+..++.++|+||+++++++.. ...++
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~   85 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQL   85 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEE
Confidence            45888999999999999999853 344    477777754322 234566778888999999999999998754 45789


Q ss_pred             EEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc-------------------
Q 039276          106 ILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT-------------------  166 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~-------------------  166 (263)
                      ++||+++|+|.+++......+++..+..++.|++.||+|||+++++|+||||+||+.+...                   
T Consensus        86 i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~~  165 (279)
T cd05111          86 VTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKK  165 (279)
T ss_pred             EEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceeccCCCcc
Confidence            9999999999999987655589999999999999999999999999999999999954321                   


Q ss_pred             ------cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccc
Q 039276          167 ------LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSR  227 (263)
Q Consensus       167 ------~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (263)
                            .++..|++|            |||||||++||+++ |+.||.....  .....+..            ..    
T Consensus       166 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~--~~~~~~~~------------~~----  227 (279)
T cd05111         166 YFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRP--HEVPDLLE------------KG----  227 (279)
T ss_pred             cccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHH------------CC----
Confidence                  234578888            99999999999998 9999864211  11111111            00    


Q ss_pred             ccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          228 EDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       228 ~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                        .+.+.+..++.++.+++.+||..+|++|||+.|+
T Consensus       228 --~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el  261 (279)
T cd05111         228 --ERLAQPQICTIDVYMVMVKCWMIDENVRPTFKEL  261 (279)
T ss_pred             --CcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHH
Confidence              0111122345568899999999999999999874

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=100.00  E-value=1.2e-33  Score=238.10  Aligned_cols=157  Identities=20%  Similarity=0.250  Sum_probs=130.3

Q ss_pred             cceecccCceEEEEEEec---CCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeec--CCeeEEEEeccC
Q 039276           37 SNLISRGGFGSIYKAKIQ---DGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSK--DDFKALILECMP  111 (263)
Q Consensus        37 ~~~lg~g~~g~v~~~~~~---~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~lv~e~~~  111 (263)
                      +.+||+|+||.||+|...   +++.+|+|.+....  ......+|+++++.++||||+++++.+..  ....++++||+.
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~   83 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE   83 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence            568999999999999843   46789999986542  23456789999999999999999998854  456889999986


Q ss_pred             CCCHhhhhhhC--------CCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-------------------
Q 039276          112 HGSLGKCLSTS--------NYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-------------------  164 (263)
Q Consensus       112 ~~~L~~~l~~~--------~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-------------------  164 (263)
                      + +|.+++...        ...+++..+..++.|++.||+|||+++++||||||+||+...                   
T Consensus        84 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~  162 (317)
T cd07868          84 H-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLF  162 (317)
T ss_pred             C-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceecc
Confidence            5 888877532        123788889999999999999999999999999999999621                   


Q ss_pred             -----------cccccccccCc-------------chhhHHHHHHHHHhCCCCCcc
Q 039276          165 -----------QTLATISYMAP-------------DTYNFGIMIMETFSGKKPTIK  196 (263)
Q Consensus       165 -----------~~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~  196 (263)
                                 ...||+.|+||             ||||+||+++||++|+.||..
T Consensus       163 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~  218 (317)
T cd07868         163 NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC  218 (317)
T ss_pred             CCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccC
Confidence                       12457789999             999999999999999999964

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=100.00  E-value=1.1e-33  Score=244.76  Aligned_cols=213  Identities=21%  Similarity=0.324  Sum_probs=164.6

Q ss_pred             ccccccceecccCceEEEEEEec------CCceEEEEEeecCCC-chHHHHHHHHHHHhhcC-CCcceeEeeEeecCCee
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ------DGMEVVVKGFNLQYG-GAFKNLDVECNMMKIIR-HQNLIKIISSCSKDDFK  103 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~------~~~~v~vK~~~~~~~-~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~  103 (263)
                      +.|...+.||+|+||.||+|++.      .+..||+|++..... ...+.+.+|+.++..+. |+||+++++.+.+.+..
T Consensus        37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~  116 (401)
T cd05107          37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPI  116 (401)
T ss_pred             HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCc
Confidence            45888899999999999999843      246799999976532 33456889999999997 99999999999998899


Q ss_pred             EEEEeccCCCCHhhhhhhCCC-----------------------------------------------------------
Q 039276          104 ALILECMPHGSLGKCLSTSNY-----------------------------------------------------------  124 (263)
Q Consensus       104 ~lv~e~~~~~~L~~~l~~~~~-----------------------------------------------------------  124 (263)
                      ++++||+++|+|.+++.....                                                           
T Consensus       117 ~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (401)
T cd05107         117 YIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMK  196 (401)
T ss_pred             EEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcch
Confidence            999999999999998864321                                                           


Q ss_pred             --------------------------------------cccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-
Q 039276          125 --------------------------------------ILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-  165 (263)
Q Consensus       125 --------------------------------------~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-  165 (263)
                                                            .+++..+..++.|++.||+|||+.+++|+||||+||++... 
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~  276 (401)
T cd05107         197 GTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGK  276 (401)
T ss_pred             hhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeCCC
Confidence                                                  14566778899999999999999999999999999984321 


Q ss_pred             ------------------------ccccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHh
Q 039276          166 ------------------------TLATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWV  208 (263)
Q Consensus       166 ------------------------~~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~  208 (263)
                                              ..++..|+||            |||||||+++||++ |..||......+. +... 
T Consensus       277 ~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~-~~~~-  354 (401)
T cd05107         277 LVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQ-FYNA-  354 (401)
T ss_pred             EEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHH-HHHH-
Confidence                                    1235669998            99999999999998 8999864321111 1100 


Q ss_pred             hhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          209 NDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                                 +...      .+.+.+..++.++.+++.+||..+|.+||++++|
T Consensus       355 -----------~~~~------~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~el  392 (401)
T cd05107         355 -----------IKRG------YRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQL  392 (401)
T ss_pred             -----------HHcC------CCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence                       0000      0111233456779999999999999999999875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=100.00  E-value=6.7e-34  Score=238.61  Aligned_cols=212  Identities=23%  Similarity=0.387  Sum_probs=165.3

Q ss_pred             ccccccceecccCceEEEEEEec--------CCceEEEEEeecCC-CchHHHHHHHHHHHhhc-CCCcceeEeeEeecCC
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ--------DGMEVVVKGFNLQY-GGAFKNLDVECNMMKII-RHQNLIKIISSCSKDD  101 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~--------~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~  101 (263)
                      ++|...+.||+|+||.||.+...        ....+++|.+.... ......+..|+++++.+ +|+|++++++++...+
T Consensus        18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~   97 (307)
T cd05098          18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG   97 (307)
T ss_pred             HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence            56999999999999999998742        13469999987642 33456678899999999 7999999999999989


Q ss_pred             eeEEEEeccCCCCHhhhhhhCC---------------CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc
Q 039276          102 FKALILECMPHGSLGKCLSTSN---------------YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT  166 (263)
Q Consensus       102 ~~~lv~e~~~~~~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~  166 (263)
                      ..++++||+++++|.+++....               ..+++..+..++.|++.||+|||+++++|+||||+||+.+...
T Consensus        98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~  177 (307)
T cd05098          98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN  177 (307)
T ss_pred             ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcCCC
Confidence            9999999999999999997532               1377888999999999999999999999999999999954211


Q ss_pred             -------------------------cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHh
Q 039276          167 -------------------------LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWV  208 (263)
Q Consensus       167 -------------------------~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~  208 (263)
                                               .++..|+||            |||||||++|||++ |..||....     .....
T Consensus       178 ~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~-----~~~~~  252 (307)
T cd05098         178 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP-----VEELF  252 (307)
T ss_pred             cEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCC-----HHHHH
Confidence                                     123569999            99999999999998 888875321     11111


Q ss_pred             hhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          209 NDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .         .....      .+...+..++.++.+++.+||..+|++|||+.+|
T Consensus       253 ~---------~~~~~------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ev  292 (307)
T cd05098         253 K---------LLKEG------HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQL  292 (307)
T ss_pred             H---------HHHcC------CCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHH
Confidence            0         00000      0112234556779999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.1e-33  Score=230.43  Aligned_cols=206  Identities=25%  Similarity=0.434  Sum_probs=164.6

Q ss_pred             ceecccCceEEEEEEecCCceEEEEEeecCCCc-hHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccCCCCHh
Q 039276           38 NLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGG-AFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLG  116 (263)
Q Consensus        38 ~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~-~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~  116 (263)
                      ++||+|++|.||++...+++.|++|.+...... ....+.+|++++++++|+|++++++++.+....++++||+++++|.
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~   80 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL   80 (251)
T ss_pred             CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence            468999999999999666999999998766443 5567889999999999999999999999999999999999999999


Q ss_pred             hhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc-------------------------ccccc
Q 039276          117 KCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT-------------------------LATIS  171 (263)
Q Consensus       117 ~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~-------------------------~g~~~  171 (263)
                      +++......++...+..++.+++.+|+|||+++++|+||+|+||+.+...                         .++..
T Consensus        81 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~  160 (251)
T cd05041          81 TFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIK  160 (251)
T ss_pred             HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcceec
Confidence            99976544578888999999999999999999999999999999964321                         11345


Q ss_pred             ccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHHH
Q 039276          172 YMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQC  238 (263)
Q Consensus       172 y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (263)
                      |+||            |||||||+++||++ |..||......  .......            ..      .+.+.+..+
T Consensus       161 y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~--~~~~~~~------------~~------~~~~~~~~~  220 (251)
T cd05041         161 WTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ--QTRERIE------------SG------YRMPAPQLC  220 (251)
T ss_pred             cCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH--HHHHHHh------------cC------CCCCCCccC
Confidence            8888            99999999999999 88887543111  1111110            00      011123445


Q ss_pred             HHHHHHhhccccccCcCCCCCccCC
Q 039276          239 MSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       239 ~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +.++.+++.+||+.+|++|||+.||
T Consensus       221 ~~~~~~li~~~l~~~p~~Rp~~~el  245 (251)
T cd05041         221 PEEIYRLMLQCWAYDPENRPSFSEI  245 (251)
T ss_pred             CHHHHHHHHHHhccChhhCcCHHHH
Confidence            6679999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=100.00  E-value=1.2e-33  Score=230.84  Aligned_cols=210  Identities=21%  Similarity=0.326  Sum_probs=166.5

Q ss_pred             cccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccCC
Q 039276           33 LFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPH  112 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~  112 (263)
                      +|+..+.||+|++|.||++.+.++..+++|.+.... .....+..|++++++++|++++++++.+......++++||+++
T Consensus         5 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~   83 (256)
T cd05112           5 ELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEH   83 (256)
T ss_pred             HeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCC
Confidence            578889999999999999987667889999886542 2345688899999999999999999999988899999999999


Q ss_pred             CCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc------------------------cc
Q 039276          113 GSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT------------------------LA  168 (263)
Q Consensus       113 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~------------------------~g  168 (263)
                      ++|.+++......+++..++.++.+++.+++|||+.+++|+||+|+||+...+.                        .+
T Consensus        84 ~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~  163 (256)
T cd05112          84 GCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKF  163 (256)
T ss_pred             CcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCcccccCCCcc
Confidence            999999876555578889999999999999999999999999999999964321                        12


Q ss_pred             cccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccch
Q 039276          169 TISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTK  235 (263)
Q Consensus       169 ~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (263)
                      +..|+||            ||||||+++|||++ |+.||.....     .......         ...      .+...+
T Consensus       164 ~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-----~~~~~~~---------~~~------~~~~~~  223 (256)
T cd05112         164 PVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN-----SEVVETI---------NAG------FRLYKP  223 (256)
T ss_pred             chhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH-----HHHHHHH---------hCC------CCCCCC
Confidence            3468888            99999999999998 9999863211     1111100         000      000112


Q ss_pred             HHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          236 EQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       236 ~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ...++++.+++.+||+.+|++|||+.++
T Consensus       224 ~~~~~~~~~l~~~~l~~~p~~Rp~~~~~  251 (256)
T cd05112         224 RLASQSVYELMQHCWKERPEDRPSFSLL  251 (256)
T ss_pred             CCCCHHHHHHHHHHcccChhhCCCHHHH
Confidence            2235669999999999999999999864

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=5.5e-34  Score=236.08  Aligned_cols=226  Identities=20%  Similarity=0.321  Sum_probs=170.5

Q ss_pred             cccccceecccCceEEEEEEec-----CCceEEEEEeecCCCc-hHHHHHHHHHHHhhcCCCcceeEeeEeec--CCeeE
Q 039276           33 LFSESNLISRGGFGSIYKAKIQ-----DGMEVVVKGFNLQYGG-AFKNLDVECNMMKIIRHQNLIKIISSCSK--DDFKA  104 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~~-----~~~~v~vK~~~~~~~~-~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~  104 (263)
                      .|...+.||+|+||.||++...     ++..+++|.+...... ....+.+|+++++.++|+|++++++++..  ....+
T Consensus         5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~   84 (284)
T cd05038           5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLR   84 (284)
T ss_pred             hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceE
Confidence            4778899999999999999843     3678999999866443 46778899999999999999999999876  55789


Q ss_pred             EEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc------------------
Q 039276          105 LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT------------------  166 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~------------------  166 (263)
                      +++||+++++|.+++......+++..+..++.|++.||+|||+.+++|+||+|+||+.....                  
T Consensus        85 lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~  164 (284)
T cd05038          85 LIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKD  164 (284)
T ss_pred             EEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccccccccccCCc
Confidence            99999999999999987665589999999999999999999999999999999999954321                  


Q ss_pred             --------cccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccc
Q 039276          167 --------LATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLS  226 (263)
Q Consensus       167 --------~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (263)
                              .++..|++|            ||||||++++||++|+.|+.........   +................+. 
T Consensus       165 ~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-  240 (284)
T cd05038         165 YYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLR---MIGIAQGQMIVTRLLELLK-  240 (284)
T ss_pred             ceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhcc---ccccccccccHHHHHHHHH-
Confidence                    123348888            9999999999999999997653222111   0000000011111111110 


Q ss_pred             cccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          227 REDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       227 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                       ...+.+.+..++.++.+++.+||+.+|++|||+.||
T Consensus       241 -~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei  276 (284)
T cd05038         241 -EGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADL  276 (284)
T ss_pred             -cCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHH
Confidence             111122334566789999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=100.00  E-value=1.1e-33  Score=234.17  Aligned_cols=211  Identities=19%  Similarity=0.295  Sum_probs=164.6

Q ss_pred             ccccccceecccCceEEEEEEe-cCCc----eEEEEEeecCCC-chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGM----EVVVKGFNLQYG-GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKAL  105 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~----~v~vK~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l  105 (263)
                      .+|+..+.||+|+||.||+|.+ .++.    +||+|.+..... .....+.+|+.+++.++|+|++++++.+... ..++
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~l   85 (279)
T cd05109           7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-TVQL   85 (279)
T ss_pred             hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-CcEE
Confidence            4588999999999999999984 3444    489999876533 3455678899999999999999999988754 5789


Q ss_pred             EEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc-------------------
Q 039276          106 ILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT-------------------  166 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~-------------------  166 (263)
                      ++|++++|+|.+++......+++..+..++.|++.||+|||+++++|+||||+||+.....                   
T Consensus        86 ~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~  165 (279)
T cd05109          86 VTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETE  165 (279)
T ss_pred             EEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeecccccce
Confidence            9999999999999987555589999999999999999999999999999999999953211                   


Q ss_pred             ------cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccc
Q 039276          167 ------LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSR  227 (263)
Q Consensus       167 ------~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (263)
                            .++..|+||            |||||||++|||++ |..||.....  ..+..++...                
T Consensus       166 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--~~~~~~~~~~----------------  227 (279)
T cd05109         166 YHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA--REIPDLLEKG----------------  227 (279)
T ss_pred             eecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHHCC----------------
Confidence                  124568999            99999999999998 8999864211  1111111110                


Q ss_pred             ccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          228 EDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       228 ~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                        ...+.+..++.++.+++.+||+.||++||++.++
T Consensus       228 --~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l  261 (279)
T cd05109         228 --ERLPQPPICTIDVYMIMVKCWMIDSECRPRFREL  261 (279)
T ss_pred             --CcCCCCccCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence              0111233456678999999999999999999764

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=100.00  E-value=7.1e-34  Score=236.10  Aligned_cols=229  Identities=20%  Similarity=0.241  Sum_probs=161.5

Q ss_pred             cccccceecccCceEEEEEE-ecCCceEEEEEeecCCC--chHHHHHHHHHHHhhc---CCCcceeEeeEeec-----CC
Q 039276           33 LFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYG--GAFKNLDVECNMMKII---RHQNLIKIISSCSK-----DD  101 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~--~~~~~~~~e~~~l~~~---~h~~i~~~~~~~~~-----~~  101 (263)
                      +|+..+.||+|+||.||+|. ..+++.||+|.+.....  .......+|+++++.+   +|+||+++++++..     ..
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~   80 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET   80 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence            37888999999999999998 45688999999876422  2233455677776655   79999999998754     24


Q ss_pred             eeEEEEeccCCCCHhhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc---------------
Q 039276          102 FKALILECMPHGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ---------------  165 (263)
Q Consensus       102 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~---------------  165 (263)
                      ..++++|++++ +|.+++.... ..+++..+..++.|++.||+|||+++++|+||||+||+.+..               
T Consensus        81 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~  159 (288)
T cd07863          81 KVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIYS  159 (288)
T ss_pred             eEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCcccccc
Confidence            57999999975 8988887543 338899999999999999999999999999999999995321               


Q ss_pred             -------ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCC---chhhhh---
Q 039276          166 -------TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPN---SVMKVV---  220 (263)
Q Consensus       166 -------~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~---~~~~~~---  220 (263)
                             ..|+..|+||            |||||||++|+|++|+.||..... ...+..........   ......   
T Consensus       160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (288)
T cd07863         160 CQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSE-ADQLGKIFDLIGLPPEDDWPRDVTLP  238 (288)
T ss_pred             CcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCH-HHHHHHHHHHhCCCChhhCccccccc
Confidence                   2457789999            999999999999999999854211 11122211111000   000000   


Q ss_pred             hhcccccccc-cccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          221 SANLLSREDE-HFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       221 ~~~~~~~~~~-~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .......... .......+++++.+++.+||+.||++|||+.|+
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~  282 (288)
T cd07863         239 RGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRA  282 (288)
T ss_pred             ccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHH
Confidence            0000000000 000113456778999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=100.00  E-value=1.1e-33  Score=231.22  Aligned_cols=206  Identities=21%  Similarity=0.337  Sum_probs=162.8

Q ss_pred             ceecccCceEEEEEEecC--C--ceEEEEEeecCCC-chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccCC
Q 039276           38 NLISRGGFGSIYKAKIQD--G--MEVVVKGFNLQYG-GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPH  112 (263)
Q Consensus        38 ~~lg~g~~g~v~~~~~~~--~--~~v~vK~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~  112 (263)
                      +.||+|++|.||+|.+.+  +  ..+++|.+..... ...+.+.+|+.++++++|+|++++++.+.+ ...++++||+++
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~   79 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL   79 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence            368999999999998542  2  3689999987755 566788899999999999999999999988 889999999999


Q ss_pred             CCHhhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc--------------------------
Q 039276          113 GSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ--------------------------  165 (263)
Q Consensus       113 ~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~--------------------------  165 (263)
                      ++|.+++.... ..+++..++.++.|++.||+|||+++++|+||+|+||+.+..                          
T Consensus        80 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~  159 (257)
T cd05040          80 GSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEH  159 (257)
T ss_pred             CcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccceecccC
Confidence            99999997754 457899999999999999999999999999999999995432                          


Q ss_pred             ccccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccc
Q 039276          166 TLATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHF  232 (263)
Q Consensus       166 ~~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (263)
                      ..++..|+||            |||||||+++||++ |+.||...... ........                  .....
T Consensus       160 ~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-~~~~~~~~------------------~~~~~  220 (257)
T cd05040         160 LKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS-QILKKIDK------------------EGERL  220 (257)
T ss_pred             CCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHh------------------cCCcC
Confidence            1245678998            99999999999998 99998532111 11111100                  00001


Q ss_pred             cchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          233 MTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       233 ~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ..+..++..+.+++.+||+.+|++|||+.+|
T Consensus       221 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~  251 (257)
T cd05040         221 ERPEACPQDIYNVMLQCWAHNPADRPTFAAL  251 (257)
T ss_pred             CCCccCCHHHHHHHHHHCCCCcccCCCHHHH
Confidence            1223455679999999999999999999874

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=5.9e-34  Score=236.43  Aligned_cols=214  Identities=18%  Similarity=0.249  Sum_probs=168.3

Q ss_pred             cccccceecccCceEEEEEEec-CCceEEEEEeecC-CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           33 LFSESNLISRGGFGSIYKAKIQ-DGMEVVVKGFNLQ-YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~~-~~~~v~vK~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      +|+..+.||+|+||.||++... ++..+++|.+... .......+.+|+.+++.++|+|++++++.+...+..++++||+
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   81 (286)
T cd06622           2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM   81 (286)
T ss_pred             hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence            4888999999999999999954 6899999998764 2233467888999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhhC--CCcccHHHHHHHHHHHHHHHHHhcc-CCccccccCCCccccccc---------------------c
Q 039276          111 PHGSLGKCLSTS--NYILDFFQRLHIMIDVASAVEYLHF-GHSTHLLLKEDQSLTQIQ---------------------T  166 (263)
Q Consensus       111 ~~~~L~~~l~~~--~~~~~~~~~~~i~~~i~~~l~~lH~-~~i~h~dlk~~nil~~~~---------------------~  166 (263)
                      ++++|..++...  ...+++..+..++.+++.||.|||+ .+++|+||+|+||+....                     .
T Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~  161 (286)
T cd06622          82 DAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAKTN  161 (286)
T ss_pred             CCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCccccC
Confidence            999999988764  2248899999999999999999996 599999999999995432                     1


Q ss_pred             cccccccCc------------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccc
Q 039276          167 LATISYMAP------------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSRE  228 (263)
Q Consensus       167 ~g~~~y~aP------------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (263)
                      .++..|+||                  |||||||++++|++|+.||...... ..+...         ..+....     
T Consensus       162 ~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~~---------~~~~~~~-----  226 (286)
T cd06622         162 IGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYA-NIFAQL---------SAIVDGD-----  226 (286)
T ss_pred             CCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchh-hHHHHH---------HHHhhcC-----
Confidence            345678888                  9999999999999999998642110 001000         0000000     


Q ss_pred             cccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          229 DEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       229 ~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                        ....+..+++++.+++.+||+.+|++||+++++
T Consensus       227 --~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l  259 (286)
T cd06622         227 --PPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQL  259 (286)
T ss_pred             --CCCCCcccCHHHHHHHHHHcccCcccCCCHHHH
Confidence              011234467789999999999999999998764

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=100.00  E-value=1.5e-33  Score=235.26  Aligned_cols=228  Identities=18%  Similarity=0.186  Sum_probs=167.1

Q ss_pred             ccccceecccCceEEEEEEe-cCCceEEEEEeecCCCc-----hHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           34 FSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGG-----AFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~-----~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      |+..+.||+|++|.||+|.. .+++.|++|.+......     ....+..|+++++.++|+|++++++++.+....++||
T Consensus         2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~   81 (298)
T cd07841           2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVF   81 (298)
T ss_pred             ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEE
Confidence            77888999999999999994 46899999999765322     3445678999999999999999999999988999999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc---------------------
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT---------------------  166 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~---------------------  166 (263)
                      ||+ +++|.+++......+++..++.++.|++.||+|||+++++|+||+|+||+.+...                     
T Consensus        82 e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~  160 (298)
T cd07841          82 EFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKMT  160 (298)
T ss_pred             ccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCCcccc
Confidence            999 8899999976553489999999999999999999999999999999999854321                     


Q ss_pred             --cccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhh-----hcc--
Q 039276          167 --LATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVS-----ANL--  224 (263)
Q Consensus       167 --~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~--  224 (263)
                        .++..|+||             |||||||+++||++|..||..... ...+.................     ...  
T Consensus       161 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (298)
T cd07841         161 HQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSD-IDQLGKIFEALGTPTEENWPGVTSLPDYVEF  239 (298)
T ss_pred             ccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCcc-HHHHHHHHHHcCCCchhhhhhcccccccccc
Confidence              234568887             999999999999999777753211 111111111110000000000     000  


Q ss_pred             -cccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          225 -LSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       225 -~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                       ..............+.++.+++.+||+.+|++|||+.||
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~  279 (298)
T cd07841         240 KPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQA  279 (298)
T ss_pred             cccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHH
Confidence             000000001123456779999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=100.00  E-value=1.8e-33  Score=231.20  Aligned_cols=210  Identities=18%  Similarity=0.293  Sum_probs=162.6

Q ss_pred             cccccceecccCceEEEEEEe-cCCceEEEEEeecCCC-----chHHHHHHHHHHHhhcCCCcceeEeeEeec--CCeeE
Q 039276           33 LFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYG-----GAFKNLDVECNMMKIIRHQNLIKIISSCSK--DDFKA  104 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~-----~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~  104 (263)
                      .|+..+.+|+|+||.||++.. .++..+++|.+.....     .....+.+|+.+++.++|+|++++++.+.+  ....+
T Consensus         3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   82 (266)
T cd06651           3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLT   82 (266)
T ss_pred             CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEE
Confidence            388899999999999999984 5688999999865421     234567789999999999999999998865  35788


Q ss_pred             EEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-------------------
Q 039276          105 LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-------------------  165 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-------------------  165 (263)
                      +++||+++++|.+++..... +++..++.++.|++.||+|||+.+++|+||+|+||+.+..                   
T Consensus        83 l~~e~~~~~~L~~~l~~~~~-l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~  161 (266)
T cd06651          83 IFMEYMPGGSVKDQLKAYGA-LTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICM  161 (266)
T ss_pred             EEEeCCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCccccccccc
Confidence            99999999999999976544 7888899999999999999999999999999999985431                   


Q ss_pred             -------ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccc
Q 039276          166 -------TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLS  226 (263)
Q Consensus       166 -------~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (263)
                             ..++..|+||            |||||||+++||++|+.||...... .......                  
T Consensus       162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~-~~~~~~~------------------  222 (266)
T cd06651         162 SGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAM-AAIFKIA------------------  222 (266)
T ss_pred             cCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchH-HHHHHHh------------------
Confidence                   1256678999            9999999999999999998643110 0000000                  


Q ss_pred             cccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          227 REDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       227 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ........+..+++.+.+++ +||..+|++|||++||
T Consensus       223 ~~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~ei  258 (266)
T cd06651         223 TQPTNPQLPSHISEHARDFL-GCIFVEARHRPSAEEL  258 (266)
T ss_pred             cCCCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHH
Confidence            00001112344556678887 6888899999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=100.00  E-value=1.7e-33  Score=236.16  Aligned_cols=215  Identities=20%  Similarity=0.274  Sum_probs=168.0

Q ss_pred             cccccccccceecccCceEEEEEEe-cCCceEEEEEeecCC---CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeE
Q 039276           29 SGLFLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKA  104 (263)
Q Consensus        29 ~~~~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~  104 (263)
                      ....+|+..+.||+|++|.||++.. .+++.|++|.+....   ....+.+.+|+++++.++|+|++++.+++.+....+
T Consensus        12 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~   91 (307)
T cd06607          12 DPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAW   91 (307)
T ss_pred             CcchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEE
Confidence            3345699999999999999999984 468999999986442   233456788999999999999999999999989999


Q ss_pred             EEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-------------------
Q 039276          105 LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-------------------  165 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-------------------  165 (263)
                      +++||+++ ++.+++......+++..+..++.|++.||.|||+.+++|+||+|+||+.+..                   
T Consensus        92 lv~e~~~g-~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~~  170 (307)
T cd06607          92 LVMEYCLG-SASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPANS  170 (307)
T ss_pred             EEHHhhCC-CHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCCCCC
Confidence            99999974 7777776544458899999999999999999999999999999999996432                   


Q ss_pred             ccccccccCc---------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccc
Q 039276          166 TLATISYMAP---------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDE  230 (263)
Q Consensus       166 ~~g~~~y~aP---------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (263)
                      ..++..|+||               ||||||+++|||++|+.||.......  .......           .    . . 
T Consensus       171 ~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~--~~~~~~~-----------~----~-~-  231 (307)
T cd06607         171 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS--ALYHIAQ-----------N----D-S-  231 (307)
T ss_pred             ccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHH--HHHHHhc-----------C----C-C-
Confidence            2356678888               99999999999999999985321100  0000000           0    0 0 


Q ss_pred             cccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          231 HFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       231 ~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .......+++++.+++.+||+.+|++||++.+|
T Consensus       232 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i  264 (307)
T cd06607         232 PTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEEL  264 (307)
T ss_pred             CCCCchhhCHHHHHHHHHHhcCChhhCcCHHHH
Confidence            000123456779999999999999999999864

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.1e-33  Score=232.97  Aligned_cols=210  Identities=23%  Similarity=0.407  Sum_probs=160.7

Q ss_pred             ccccceecccCceEEEEEEec-C---CceEEEEEeecCCC--chHHHHHHHHHHHhhcCCCcceeEeeEeecCC------
Q 039276           34 FSESNLISRGGFGSIYKAKIQ-D---GMEVVVKGFNLQYG--GAFKNLDVECNMMKIIRHQNLIKIISSCSKDD------  101 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~~-~---~~~v~vK~~~~~~~--~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~------  101 (263)
                      |...+.||+|+||.||.|... +   +..+|+|.++....  .....+.+|++.++.++|+|++++++.+....      
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   80 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP   80 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence            456788999999999999843 2   36799999876532  33457888999999999999999999876544      


Q ss_pred             eeEEEEeccCCCCHhhhhhhC-----CCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc----------
Q 039276          102 FKALILECMPHGSLGKCLSTS-----NYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT----------  166 (263)
Q Consensus       102 ~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~----------  166 (263)
                      ..++++||+++++|..++...     ...+++..+..++.|++.||+|||+.+++|+||||+||+.+...          
T Consensus        81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~  160 (273)
T cd05035          81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLS  160 (273)
T ss_pred             ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccce
Confidence            379999999999999888532     12378888999999999999999999999999999999854321          


Q ss_pred             ---------------cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhh
Q 039276          167 ---------------LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMK  218 (263)
Q Consensus       167 ---------------~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~  218 (263)
                                     .++..|+||            |||||||++|||++ |..||.....  ..+......        
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~--~~~~~~~~~--------  230 (273)
T cd05035         161 KKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVEN--HEIYDYLRH--------  230 (273)
T ss_pred             eeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHc--------
Confidence                           123568888            99999999999999 8888854211  111111100        


Q ss_pred             hhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          219 VVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                                ......+..+++++.+++.+||+.||++|||+.||
T Consensus       231 ----------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~  265 (273)
T cd05035         231 ----------GNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKL  265 (273)
T ss_pred             ----------CCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence                      00111234566779999999999999999999874

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=100.00  E-value=4e-34  Score=238.37  Aligned_cols=212  Identities=24%  Similarity=0.301  Sum_probs=168.4

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      +.|.....||+|+||.||++.. .++..|++|.+........+.+.+|+..++.++|+|++++++.+...+..++++||+
T Consensus        22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~  101 (292)
T cd06658          22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFL  101 (292)
T ss_pred             HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCC
Confidence            4577778899999999999984 468899999987765556677889999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------cc
Q 039276          111 PHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------TL  167 (263)
Q Consensus       111 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------~~  167 (263)
                      ++++|.+++...  .+++..+..++.|++.||+|||+++++|+||+|+||+.+..                       ..
T Consensus       102 ~~~~L~~~~~~~--~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~  179 (292)
T cd06658         102 EGGALTDIVTHT--RMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLV  179 (292)
T ss_pred             CCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCceee
Confidence            999999988543  37888999999999999999999999999999999985431                       23


Q ss_pred             ccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccch
Q 039276          168 ATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTK  235 (263)
Q Consensus       168 g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (263)
                      |+..|+||            ||||||++++||++|+.||....    .....          ..+....    ....+..
T Consensus       180 ~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~----~~~~~----------~~~~~~~----~~~~~~~  241 (292)
T cd06658         180 GTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEP----PLQAM----------RRIRDNL----PPRVKDS  241 (292)
T ss_pred             cCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC----HHHHH----------HHHHhcC----CCccccc
Confidence            57789999            99999999999999999985321    11100          0000000    0000112


Q ss_pred             HHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          236 EQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       236 ~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ...++.+.+++.+||..+|++|||+++|
T Consensus       242 ~~~~~~~~~li~~~l~~~P~~Rpt~~~i  269 (292)
T cd06658         242 HKVSSVLRGFLDLMLVREPSQRATAQEL  269 (292)
T ss_pred             cccCHHHHHHHHHHccCChhHCcCHHHH
Confidence            2345568999999999999999999874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=100.00  E-value=1.5e-33  Score=231.03  Aligned_cols=211  Identities=21%  Similarity=0.318  Sum_probs=165.3

Q ss_pred             cccccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           31 LFLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      .++|...+.||+|+||.||++...++..+++|.+.... .....+.+|+++++.++|+|++++.+.+.+ ...++++||+
T Consensus         5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~   82 (260)
T cd05073           5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFM   82 (260)
T ss_pred             ccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeC
Confidence            35699999999999999999987777889999887542 234677889999999999999999999877 6789999999


Q ss_pred             CCCCHhhhhhhC-CCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc-----------------------
Q 039276          111 PHGSLGKCLSTS-NYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT-----------------------  166 (263)
Q Consensus       111 ~~~~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~-----------------------  166 (263)
                      ++++|.+++... ....++..+..++.|++.||+|||+.+++|+||+|+|++.+...                       
T Consensus        83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~  162 (260)
T cd05073          83 AKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREG  162 (260)
T ss_pred             CCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCCCcccccC
Confidence            999999999763 23377888899999999999999999999999999999843221                       


Q ss_pred             -cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccc
Q 039276          167 -LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHF  232 (263)
Q Consensus       167 -~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (263)
                       .++..|+||            |+|||||+++++++ |+.||....  ...........                  ...
T Consensus       163 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~--~~~~~~~~~~~------------------~~~  222 (260)
T cd05073         163 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS--NPEVIRALERG------------------YRM  222 (260)
T ss_pred             CcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCC--HHHHHHHHhCC------------------CCC
Confidence             123558888            99999999999999 999986321  11111111000                  001


Q ss_pred             cchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          233 MTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       233 ~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +.+...+.++.+++.+||+.+|++||++.+|
T Consensus       223 ~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l  253 (260)
T cd05073         223 PRPENCPEELYNIMMRCWKNRPEERPTFEYI  253 (260)
T ss_pred             CCcccCCHHHHHHHHHHcccCcccCcCHHHH
Confidence            1223455679999999999999999998764

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=100.00  E-value=7.1e-34  Score=237.42  Aligned_cols=213  Identities=23%  Similarity=0.286  Sum_probs=168.9

Q ss_pred             cccccccceecccCceEEEEEEe-cCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           31 LFLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      ...|+....||+|+||.||++.. .+++.|++|.+........+.+.+|+..++.++|+|++++++.+..++..++++||
T Consensus        20 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~   99 (297)
T cd06659          20 RSLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEF   99 (297)
T ss_pred             hhhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEec
Confidence            34577777899999999999984 46899999999776555667788999999999999999999999999999999999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------c
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------T  166 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------~  166 (263)
                      +++++|..++...  .+++..++.++.|++.||+|||+.+++|+||+|+||+.+..                       .
T Consensus       100 ~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~  177 (297)
T cd06659         100 LQGGALTDIVSQT--RLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSL  177 (297)
T ss_pred             CCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccccccce
Confidence            9999999877553  37889999999999999999999999999999999985421                       2


Q ss_pred             cccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccc
Q 039276          167 LATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT  234 (263)
Q Consensus       167 ~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (263)
                      .++..|+||            |||||||+++||++|+.||..... ..... ......                ......
T Consensus       178 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~-~~~~~-~~~~~~----------------~~~~~~  239 (297)
T cd06659         178 VGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSP-VQAMK-RLRDSP----------------PPKLKN  239 (297)
T ss_pred             ecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHH-HHhccC----------------CCCccc
Confidence            467789999            999999999999999999863211 01111 000000                000011


Q ss_pred             hHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          235 KEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       235 ~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ....++.+.+++.+||+.+|++||++++|
T Consensus       240 ~~~~~~~l~~~i~~~l~~~P~~Rps~~~l  268 (297)
T cd06659         240 AHKISPVLRDFLERMLTREPQERATAQEL  268 (297)
T ss_pred             cCCCCHHHHHHHHHHhcCCcccCcCHHHH
Confidence            22345668999999999999999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=1e-33  Score=233.85  Aligned_cols=212  Identities=18%  Similarity=0.296  Sum_probs=165.4

Q ss_pred             ccccccceecccCceEEEEEEec------CCceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ------DGMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKA  104 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~------~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~  104 (263)
                      .+|...+.||+|+||.||++...      .+..+++|.+.... ......+.+|+.+++.++|+|++++++++......+
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~   85 (277)
T cd05032           6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTL   85 (277)
T ss_pred             HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcE
Confidence            45888999999999999999843      23689999986553 234456788999999999999999999999999999


Q ss_pred             EEEeccCCCCHhhhhhhCC---------CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc----------
Q 039276          105 LILECMPHGSLGKCLSTSN---------YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ----------  165 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~---------~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~----------  165 (263)
                      +++||+++++|.+++....         ..+++..+..++.|++.||.|||+.+++|+||+|+||+.+..          
T Consensus        86 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~dfg~  165 (277)
T cd05032          86 VVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFGM  165 (277)
T ss_pred             EEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEECCccc
Confidence            9999999999999986432         125677889999999999999999999999999999985421          


Q ss_pred             ---------------ccccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchh
Q 039276          166 ---------------TLATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVM  217 (263)
Q Consensus       166 ---------------~~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~  217 (263)
                                     ..++..|+||            |||||||++||+++ |..||....  .........        
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~--~~~~~~~~~--------  235 (277)
T cd05032         166 TRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLS--NEEVLKFVI--------  235 (277)
T ss_pred             chhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCC--HHHHHHHHh--------
Confidence                           1235679999            99999999999998 999975321  111111110        


Q ss_pred             hhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          218 KVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                                .......+..++.++.+++.+||+.+|++|||+.+|
T Consensus       236 ----------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l  271 (277)
T cd05032         236 ----------DGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEI  271 (277)
T ss_pred             ----------cCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHH
Confidence                      011112233456779999999999999999999874

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=100.00  E-value=2.3e-33  Score=232.95  Aligned_cols=212  Identities=22%  Similarity=0.278  Sum_probs=168.4

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      ..|...+.||.|++|.||++. ..+++.+++|.+........+.+.+|+.+++.++|+|++++++++...+..++++||+
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~   98 (285)
T cd06648          19 SYLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFL   98 (285)
T ss_pred             HhhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEecc
Confidence            346777899999999999998 4568899999987665555667889999999999999999999999889999999999


Q ss_pred             CCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------cc
Q 039276          111 PHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------TL  167 (263)
Q Consensus       111 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------~~  167 (263)
                      ++++|.+++...  .++...+..++.|++.||+|||+++++|+||+|+||+.+..                       ..
T Consensus        99 ~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~  176 (285)
T cd06648          99 EGGALTDIVTHT--RMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLV  176 (285)
T ss_pred             CCCCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCccccccc
Confidence            999999998763  37888999999999999999999999999999999984421                       13


Q ss_pred             ccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccch
Q 039276          168 ATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTK  235 (263)
Q Consensus       168 g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (263)
                      |+..|+||            |||||||++++|++|+.||...    ........          ...    .........
T Consensus       177 ~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~----~~~~~~~~----------~~~----~~~~~~~~~  238 (285)
T cd06648         177 GTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNE----PPLQAMKR----------IRD----NLPPKLKNL  238 (285)
T ss_pred             CCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCC----CHHHHHHH----------HHh----cCCCCCccc
Confidence            66779999            9999999999999999998531    11100000          000    000000112


Q ss_pred             HHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          236 EQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       236 ~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ..++..+.+++.+||+.+|++|||+.++
T Consensus       239 ~~~~~~l~~li~~~l~~~p~~Rpt~~~i  266 (285)
T cd06648         239 HKVSPRLRSFLDRMLVRDPAQRATAAEL  266 (285)
T ss_pred             ccCCHHHHHHHHHHcccChhhCcCHHHH
Confidence            2355679999999999999999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=100.00  E-value=9.6e-34  Score=235.73  Aligned_cols=210  Identities=23%  Similarity=0.360  Sum_probs=162.9

Q ss_pred             ccccceecccCceEEEEEEec------CCceEEEEEeecCCC-chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEE
Q 039276           34 FSESNLISRGGFGSIYKAKIQ------DGMEVVVKGFNLQYG-GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALI  106 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~~------~~~~v~vK~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv  106 (263)
                      |+..+.||+|+||.||+|...      ....+++|.+..... .....+.+|+.+++.++||||+++++.+...+..+++
T Consensus         2 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   81 (290)
T cd05045           2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLI   81 (290)
T ss_pred             ccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEE
Confidence            677889999999999999843      124678888765432 3456788899999999999999999999988899999


Q ss_pred             EeccCCCCHhhhhhhCC-----------------------CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccc
Q 039276          107 LECMPHGSLGKCLSTSN-----------------------YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQ  163 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~~~-----------------------~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~  163 (263)
                      +||+++++|.+++....                       ..+++..++.++.|++.||+|||+.+++|+||+|+||++.
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill~  161 (290)
T cd05045          82 VEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVA  161 (290)
T ss_pred             EEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEEc
Confidence            99999999999886421                       2267888899999999999999999999999999999854


Q ss_pred             ccc-------------------------cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhh
Q 039276          164 IQT-------------------------LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLK  205 (263)
Q Consensus       164 ~~~-------------------------~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~  205 (263)
                      ...                         .++..|+||            ||||||++++||++ |..||....  ...+.
T Consensus       162 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~--~~~~~  239 (290)
T cd05045         162 EGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIA--PERLF  239 (290)
T ss_pred             CCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCC--HHHHH
Confidence            211                         234578888            99999999999998 999985321  11111


Q ss_pred             hHhhhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          206 HWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +            ......      +.+.+..++.++.+++.+||+.+|++||++.+|
T Consensus       240 ~------------~~~~~~------~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i  279 (290)
T cd05045         240 N------------LLKTGY------RMERPENCSEEMYNLMLTCWKQEPDKRPTFADI  279 (290)
T ss_pred             H------------HHhCCC------CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHH
Confidence            1            111100      111234456679999999999999999999874

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=100.00  E-value=7.5e-34  Score=231.95  Aligned_cols=211  Identities=18%  Similarity=0.230  Sum_probs=167.5

Q ss_pred             cccccceecccCceEEEEEEe-cCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           33 LFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      +|+..+.||+|+||.||++.. .++..+++|.+....  ....+.+.+|+++++.++|+|++++++.+.+.+..++++||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~   80 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY   80 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence            378889999999999999994 458899999987642  23445677899999999999999999999999999999999


Q ss_pred             cCCCCHhhhhhhCCC-cccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc----------------------
Q 039276          110 MPHGSLGKCLSTSNY-ILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT----------------------  166 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~----------------------  166 (263)
                      +++++|.+++..... .+++..+..++.|++.||+|||+.+++|+||+|+||+.+...                      
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~  160 (257)
T cd08225          81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAY  160 (257)
T ss_pred             CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCccccc
Confidence            999999999876432 378889999999999999999999999999999999964321                      


Q ss_pred             --cccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccc
Q 039276          167 --LATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHF  232 (263)
Q Consensus       167 --~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (263)
                        .|+..|+||            |+||||++++||++|..||....     ...........        .       ..
T Consensus       161 ~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~--------~-------~~  220 (257)
T cd08225         161 TCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN-----LHQLVLKICQG--------Y-------FA  220 (257)
T ss_pred             ccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc-----HHHHHHHHhcc--------c-------CC
Confidence              356678888            99999999999999999985321     11111100000        0       00


Q ss_pred             cchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          233 MTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       233 ~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +.....+.++.+++.+||..+|++|||+.||
T Consensus       221 ~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l  251 (257)
T cd08225         221 PISPNFSRDLRSLISQLFKVSPRDRPSITSI  251 (257)
T ss_pred             CCCCCCCHHHHHHHHHHhccChhhCcCHHHH
Confidence            1123445669999999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=100.00  E-value=9.3e-34  Score=237.41  Aligned_cols=213  Identities=22%  Similarity=0.379  Sum_probs=165.1

Q ss_pred             cccccccceecccCceEEEEEEec--------CCceEEEEEeecCC-CchHHHHHHHHHHHhhc-CCCcceeEeeEeecC
Q 039276           31 LFLFSESNLISRGGFGSIYKAKIQ--------DGMEVVVKGFNLQY-GGAFKNLDVECNMMKII-RHQNLIKIISSCSKD  100 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~~--------~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~  100 (263)
                      ..+|...+.||+|+||.||++...        ++..+++|.+.... ......+.+|+.+++.+ +|+||+++++++...
T Consensus        14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~   93 (304)
T cd05101          14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD   93 (304)
T ss_pred             HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence            355899999999999999999631        24578999886542 33456788999999999 899999999999988


Q ss_pred             CeeEEEEeccCCCCHhhhhhhCC---------------CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc
Q 039276          101 DFKALILECMPHGSLGKCLSTSN---------------YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ  165 (263)
Q Consensus       101 ~~~~lv~e~~~~~~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~  165 (263)
                      ...+++|||+++++|.+++....               ..+++..+..++.|++.||+|||+++++|+||||+||+....
T Consensus        94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~~~  173 (304)
T cd05101          94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTEN  173 (304)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEcCC
Confidence            89999999999999999987532               236777889999999999999999999999999999995421


Q ss_pred             -------------------------ccccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhH
Q 039276          166 -------------------------TLATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHW  207 (263)
Q Consensus       166 -------------------------~~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~  207 (263)
                                               ..++..|+||            ||||||+++|+|++ |..||....     ...+
T Consensus       174 ~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-----~~~~  248 (304)
T cd05101         174 NVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP-----VEEL  248 (304)
T ss_pred             CcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC-----HHHH
Confidence                                     1234569999            99999999999998 888875321     1111


Q ss_pred             hhhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          208 VNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ...         +..      ..+...+..++.++.+++.+||+.+|++|||+.||
T Consensus       249 ~~~---------~~~------~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~  289 (304)
T cd05101         249 FKL---------LKE------GHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQL  289 (304)
T ss_pred             HHH---------HHc------CCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHH
Confidence            110         000      00111234566779999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>PTZ00284 protein kinase; Provisional

Probab=100.00  E-value=1.5e-33  Score=249.31  Aligned_cols=162  Identities=20%  Similarity=0.266  Sum_probs=132.4

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCCCchHHHHHHHHHHHhhcCC------CcceeEeeEeecC-Cee
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRH------QNLIKIISSCSKD-DFK  103 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h------~~i~~~~~~~~~~-~~~  103 (263)
                      .+|+..+.||+|+||.||+|.. ..++.||||++.... ........|+++++.++|      .+++++++++... ...
T Consensus       129 ~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~  207 (467)
T PTZ00284        129 QRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHM  207 (467)
T ss_pred             CcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceE
Confidence            4699999999999999999984 558889999986542 223344557777666644      4588888888654 578


Q ss_pred             EEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhcc-CCccccccCCCccccccc-----------------
Q 039276          104 ALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHF-GHSTHLLLKEDQSLTQIQ-----------------  165 (263)
Q Consensus       104 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~-~~i~h~dlk~~nil~~~~-----------------  165 (263)
                      +++||++ +++|.+++...+. +++..+..++.|++.||+|||. .+|+||||||+||++...                 
T Consensus       208 ~iv~~~~-g~~l~~~l~~~~~-l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~  285 (467)
T PTZ00284        208 CIVMPKY-GPCLLDWIMKHGP-FSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPC  285 (467)
T ss_pred             EEEEecc-CCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCc
Confidence            9999988 6689888876543 8899999999999999999997 599999999999997532                 


Q ss_pred             -------------------ccccccccCc------------chhhHHHHHHHHHhCCCCCcc
Q 039276          166 -------------------TLATISYMAP------------DTYNFGIMIMETFSGKKPTIK  196 (263)
Q Consensus       166 -------------------~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~  196 (263)
                                         ..||+.|+||            |||||||++|||++|+.||..
T Consensus       286 ~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~  347 (467)
T PTZ00284        286 RVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDT  347 (467)
T ss_pred             eEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence                               2568899999            999999999999999999974

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=100.00  E-value=2.5e-33  Score=234.91  Aligned_cols=210  Identities=20%  Similarity=0.262  Sum_probs=165.2

Q ss_pred             cccccceecccCceEEEEEEe-cCCceEEEEEeecCC---CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEe
Q 039276           33 LFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      .|+..+.+|+|+||.||++.. ..++.|++|.+....   ....+.+.+|+++++.++|+||+++++.+...+..+++||
T Consensus         2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (305)
T cd05609           2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVME   81 (305)
T ss_pred             CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEe
Confidence            488899999999999999984 457899999987653   2334567789999999999999999999999889999999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------  165 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------  165 (263)
                      |+++++|.+++..... +++..+..++.|++.||+|||+++++|+||+|+||+....                       
T Consensus        82 ~~~g~~L~~~l~~~~~-~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~  160 (305)
T cd05609          82 YVEGGDCATLLKNIGA-LPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLY  160 (305)
T ss_pred             cCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCcccccc
Confidence            9999999999976543 7888899999999999999999999999999999985421                       


Q ss_pred             ---------------ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhh
Q 039276          166 ---------------TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMK  218 (263)
Q Consensus       166 ---------------~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~  218 (263)
                                     ..++..|+||            |||||||+++||++|..||.....     ..+....       
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~-----~~~~~~~-------  228 (305)
T cd05609         161 EGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP-----EELFGQV-------  228 (305)
T ss_pred             ccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHH-------
Confidence                           1245579999            999999999999999999853211     1111100       


Q ss_pred             hhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCcc
Q 039276          219 VVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAK  261 (263)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~  261 (263)
                       ....     .........+++++.+++.+||+.+|++||++.
T Consensus       229 -~~~~-----~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~  265 (305)
T cd05609         229 -ISDD-----IEWPEGDEALPADAQDLISRLLRQNPLERLGTG  265 (305)
T ss_pred             -Hhcc-----cCCCCccccCCHHHHHHHHHHhccChhhccCcc
Confidence             0000     000001124566799999999999999999853

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=100.00  E-value=1e-33  Score=240.09  Aligned_cols=214  Identities=16%  Similarity=0.166  Sum_probs=163.1

Q ss_pred             cccccceecccCceEEEEEEe-cCCceEEEEEeecC---CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEe
Q 039276           33 LFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQ---YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      +|+..+.||+|+||.||++.. .+++.+|+|.+...   .......+.+|+.++..++|++++++.+.+.+....++|||
T Consensus         2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (332)
T cd05623           2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMD   81 (332)
T ss_pred             CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEe
Confidence            588899999999999999984 45788999998653   22234457788999999999999999999999999999999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc------------------------
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI------------------------  164 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~------------------------  164 (263)
                      |+++|+|.+++......+++..+..++.|++.||+|||+++++||||||+||+.+.                        
T Consensus        82 y~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~~~  161 (332)
T cd05623          82 YYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSS  161 (332)
T ss_pred             ccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCCcceec
Confidence            99999999999875455888899999999999999999999999999999998532                        


Q ss_pred             cccccccccCc-----------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccc
Q 039276          165 QTLATISYMAP-----------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSR  227 (263)
Q Consensus       165 ~~~g~~~y~aP-----------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (263)
                      ...||+.|+||                 |||||||++|||++|+.||....    ....+.         .+.....   
T Consensus       162 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~----~~~~~~---------~i~~~~~---  225 (332)
T cd05623         162 VAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAES----LVETYG---------KIMNHKE---  225 (332)
T ss_pred             ccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCC----HHHHHH---------HHhCCCc---
Confidence            12478889998                 99999999999999999986321    111110         0000000   


Q ss_pred             ccccccchHHHHHHHHHhhccccccCcC--CCCCccC
Q 039276          228 EDEHFMTKEQCMSFVFNLAMECTVESPN--QRINAKE  262 (263)
Q Consensus       228 ~~~~~~~~~~~~~~l~~l~~~cl~~~p~--~Rpt~~e  262 (263)
                      ..........+++++.+++.+|+..+++  .|++++|
T Consensus       226 ~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~  262 (332)
T cd05623         226 RFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIED  262 (332)
T ss_pred             cccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHH
Confidence            0000111234577789999998865443  3566654

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=100.00  E-value=1e-33  Score=232.79  Aligned_cols=206  Identities=25%  Similarity=0.451  Sum_probs=160.6

Q ss_pred             ceecccCceEEEEEEecC-------CceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           38 NLISRGGFGSIYKAKIQD-------GMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        38 ~~lg~g~~g~v~~~~~~~-------~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      +.||+|+||.||+|...+       +..+++|.+.... ......+.+|+.+++.++|+||+++++++.+.+..++++||
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL   80 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence            368999999999998542       2578999886542 24566788899999999999999999999988899999999


Q ss_pred             cCCCCHhhhhhhC------CCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc-----------------
Q 039276          110 MPHGSLGKCLSTS------NYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT-----------------  166 (263)
Q Consensus       110 ~~~~~L~~~l~~~------~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~-----------------  166 (263)
                      +++++|.+++...      ...+++..+..++.|++.||+|||+.+++|+||+|+||+.+...                 
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~  160 (269)
T cd05044          81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARD  160 (269)
T ss_pred             cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccccc
Confidence            9999999998742      12267888999999999999999999999999999999965322                 


Q ss_pred             -------------cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhh
Q 039276          167 -------------LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVV  220 (263)
Q Consensus       167 -------------~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (263)
                                   .++..|+||            |||||||++|||++ |+.||.....  .......            
T Consensus       161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~--~~~~~~~------------  226 (269)
T cd05044         161 IYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNN--QEVLQHV------------  226 (269)
T ss_pred             cccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCH--HHHHHHH------------
Confidence                         123568888            99999999999998 9999853211  0110000            


Q ss_pred             hhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          221 SANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .      ...+...+..+++.+.+++.+||+.+|++||++++|
T Consensus       227 ~------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i  263 (269)
T cd05044         227 T------AGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRI  263 (269)
T ss_pred             h------cCCccCCcccchHHHHHHHHHHcCCCcccCCCHHHH
Confidence            0      001112234566789999999999999999999874

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=100.00  E-value=3.3e-33  Score=229.02  Aligned_cols=213  Identities=22%  Similarity=0.320  Sum_probs=169.8

Q ss_pred             cccccceecccCceEEEEEEe-cCCceEEEEEeecCCCc--hHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           33 LFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGG--AFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~--~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      +|...+.||+|++|.||++.. .+++.+++|.+......  ..+.+..|+++++.++|+||+++++.+.+.+..++++||
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY   80 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence            478889999999999999984 46899999999876443  677788999999999999999999999888999999999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc------------------------
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ------------------------  165 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~------------------------  165 (263)
                      +++++|.+++..... +++..+..++.+++.||+|||+.+++|+||+|+||+.+..                        
T Consensus        81 ~~~~~L~~~~~~~~~-~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~  159 (264)
T cd06626          81 CSGGTLEELLEHGRI-LDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEE  159 (264)
T ss_pred             CCCCcHHHHHhhcCC-CChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCccccc
Confidence            999999999987544 7888889999999999999999999999999999985431                        


Q ss_pred             ---ccccccccCc---------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccc
Q 039276          166 ---TLATISYMAP---------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSR  227 (263)
Q Consensus       166 ---~~g~~~y~aP---------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (263)
                         ..++..|+||               ||||||++++++++|+.||...... .........                .
T Consensus       160 ~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~-~~~~~~~~~----------------~  222 (264)
T cd06626         160 VQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE-FQIMFHVGA----------------G  222 (264)
T ss_pred             ccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcch-HHHHHHHhc----------------C
Confidence               1245678887               9999999999999999998643211 101000000                0


Q ss_pred             ccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          228 EDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       228 ~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .....+....+++.+.+++.+||+.+|++|||+.+|
T Consensus       223 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i  258 (264)
T cd06626         223 HKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASEL  258 (264)
T ss_pred             CCCCCCcccccCHHHHHHHHHHccCCcccCCCHHHH
Confidence            000111223346678999999999999999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=100.00  E-value=1.9e-33  Score=234.43  Aligned_cols=212  Identities=24%  Similarity=0.307  Sum_probs=169.2

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      .+|...+.||+|+||.||++.. .++..+++|.+........+.+.+|+.+++.++|+|++++++.+...+..++++||+
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~   98 (293)
T cd06647          19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL   98 (293)
T ss_pred             hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence            4588999999999999999984 468899999987665555677888999999999999999999999988999999999


Q ss_pred             CCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------cc
Q 039276          111 PHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------TL  167 (263)
Q Consensus       111 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------~~  167 (263)
                      ++++|.+++....  +++..+..++.|++.||.|||+++++|+||+|+||+....                       ..
T Consensus        99 ~~~~L~~~~~~~~--l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~~~~  176 (293)
T cd06647          99 AGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV  176 (293)
T ss_pred             CCCcHHHHHhhcC--CCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceeccccccccccccc
Confidence            9999999987543  6788899999999999999999999999999999985321                       13


Q ss_pred             ccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccch
Q 039276          168 ATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTK  235 (263)
Q Consensus       168 g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (263)
                      +++.|++|            |||||||+++++++|+.||........ +....                 ..........
T Consensus       177 ~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~-~~~~~-----------------~~~~~~~~~~  238 (293)
T cd06647         177 GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-LYLIA-----------------TNGTPELQNP  238 (293)
T ss_pred             CChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhh-eeehh-----------------cCCCCCCCCc
Confidence            56668999            999999999999999999864211110 00000                 0000001123


Q ss_pred             HHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          236 EQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       236 ~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ..++..+.+++.+||..+|++||+++++
T Consensus       239 ~~~~~~l~~li~~~l~~~p~~Rp~~~~i  266 (293)
T cd06647         239 EKLSAIFRDFLNRCLEMDVEKRGSAKEL  266 (293)
T ss_pred             cccCHHHHHHHHHHccCChhhCcCHHHH
Confidence            3456679999999999999999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=100.00  E-value=3.4e-33  Score=229.20  Aligned_cols=216  Identities=23%  Similarity=0.264  Sum_probs=169.9

Q ss_pred             cccccceecccCceEEEEEEe-cCCceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           33 LFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      +|+..+.+|.|++|.||++.. .++..+++|++.... ....+.+.+|+++++.++|+|++++++.+...+..++++|++
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~   81 (267)
T cd06610           2 DYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYL   81 (267)
T ss_pred             cceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEecc
Confidence            488899999999999999994 468899999987543 235567889999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhhCC--CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------
Q 039276          111 PHGSLGKCLSTSN--YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------  165 (263)
Q Consensus       111 ~~~~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------  165 (263)
                      ++++|.+++....  ..+++..+..++.|++.||+|||+.+++|+||+|+||+.+..                       
T Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~  161 (267)
T cd06610          82 SGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRK  161 (267)
T ss_pred             CCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcccccc
Confidence            9999999997532  347888999999999999999999999999999999995422                       


Q ss_pred             ----ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccc
Q 039276          166 ----TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSRE  228 (263)
Q Consensus       166 ----~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (263)
                          ..|+..|+||             |+|||||++++|++|+.||...... ..+........ ..        ..   
T Consensus       162 ~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~-~~~~~~~~~~~-~~--------~~---  228 (267)
T cd06610         162 VRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPM-KVLMLTLQNDP-PS--------LE---  228 (267)
T ss_pred             ccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChh-hhHHHHhcCCC-CC--------cC---
Confidence                1356678888             9999999999999999998643111 11111111100 00        00   


Q ss_pred             cccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          229 DEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       229 ~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                        .......+++++.+++.+||+.||++|||+.+|
T Consensus       229 --~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l  261 (267)
T cd06610         229 --TGADYKKYSKSFRKMISLCLQKDPSKRPTAEEL  261 (267)
T ss_pred             --CccccccccHHHHHHHHHHcCCChhhCcCHHHH
Confidence              000123556779999999999999999999874

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=100.00  E-value=1.3e-33  Score=235.58  Aligned_cols=218  Identities=18%  Similarity=0.305  Sum_probs=163.5

Q ss_pred             cccccceecccCceEEEEEEec-----------------CCceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEe
Q 039276           33 LFSESNLISRGGFGSIYKAKIQ-----------------DGMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKII   94 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~~-----------------~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~   94 (263)
                      +|+..+.||+|+||.||++...                 +...+++|.+.... ....+.+.+|+++++.++|+|+++++
T Consensus         6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~   85 (296)
T cd05095           6 RLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLL   85 (296)
T ss_pred             hceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEE
Confidence            4899999999999999998532                 23468899987553 33456788999999999999999999


Q ss_pred             eEeecCCeeEEEEeccCCCCHhhhhhhCC----------CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc
Q 039276           95 SSCSKDDFKALILECMPHGSLGKCLSTSN----------YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI  164 (263)
Q Consensus        95 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~  164 (263)
                      +++...+..++++||+++++|.+++....          ..+++..+..++.|++.||+|||+++++|+||||+||+.+.
T Consensus        86 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili~~  165 (296)
T cd05095          86 AVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVGK  165 (296)
T ss_pred             EEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEEcC
Confidence            99999889999999999999999987532          12566788999999999999999999999999999999542


Q ss_pred             cc-------------------------cccccccCc------------chhhHHHHHHHHHh--CCCCCccccCCCchhh
Q 039276          165 QT-------------------------LATISYMAP------------DTYNFGIMIMETFS--GKKPTIKFFHGEMTLK  205 (263)
Q Consensus       165 ~~-------------------------~g~~~y~aP------------Dv~SlG~il~ell~--g~~Pf~~~~~~~~~~~  205 (263)
                      ..                         .++..|++|            |||||||++|||++  |..||......+ ...
T Consensus       166 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~-~~~  244 (296)
T cd05095         166 NYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQ-VIE  244 (296)
T ss_pred             CCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHH-HHH
Confidence            11                         113568888            99999999999998  778875431111 110


Q ss_pred             hHhhhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          206 HWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ...         .......   .....+.+..+++.+.+++.+||+.||++|||+.+|
T Consensus       245 ~~~---------~~~~~~~---~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i  290 (296)
T cd05095         245 NTG---------EFFRDQG---RQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEI  290 (296)
T ss_pred             HHH---------HHHhhcc---ccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHH
Confidence            000         0000000   000011233456779999999999999999999875

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=100.00  E-value=2.6e-33  Score=232.31  Aligned_cols=229  Identities=21%  Similarity=0.186  Sum_probs=169.8

Q ss_pred             cccccceecccCceEEEEEEe-cCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           33 LFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      +|+..+.||+|++|.||+|.. .++..|++|.+....  ......+.+|+.+++.++|+|++++++++.+....++|+||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~   80 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY   80 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence            378889999999999999994 468999999997653  33456788999999999999999999999999999999999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc------------------------
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ------------------------  165 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~------------------------  165 (263)
                      + +++|.+++......+++..+..++.|++.+|+|||+++++|+||+|+||+.+..                        
T Consensus        81 ~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~  159 (286)
T cd07832          81 M-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSH  159 (286)
T ss_pred             c-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCcccc
Confidence            9 999999987655558999999999999999999999999999999999985421                        


Q ss_pred             ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhh--------hhhc-
Q 039276          166 TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKV--------VSAN-  223 (263)
Q Consensus       166 ~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~-  223 (263)
                      ..++..|+||             ||||+||+++||++|..||..... ...+...............        .... 
T Consensus       160 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (286)
T cd07832         160 QVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGEND-IEQLAIVFRTLGTPNEETWPGLTSLPDYNKIT  238 (286)
T ss_pred             ccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCH-HHHHHHHHHHcCCCChHHHhhccCcchhhccc
Confidence            2356678888             999999999999999877753211 1111111111110000000        0000 


Q ss_pred             cccccccc-ccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          224 LLSREDEH-FMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       224 ~~~~~~~~-~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ........ .......+.++.+++.+||+.+|++|||++++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~  279 (286)
T cd07832         239 FPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEA  279 (286)
T ss_pred             CCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHH
Confidence            00000000 00112345779999999999999999999864

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.8e-33  Score=230.01  Aligned_cols=204  Identities=23%  Similarity=0.348  Sum_probs=159.7

Q ss_pred             ceecccCceEEEEEEec-C---CceEEEEEeecCCC-chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccCC
Q 039276           38 NLISRGGFGSIYKAKIQ-D---GMEVVVKGFNLQYG-GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPH  112 (263)
Q Consensus        38 ~~lg~g~~g~v~~~~~~-~---~~~v~vK~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~  112 (263)
                      +.||+|+||.||+|... .   +..+++|.+..... ...+.+.+|+.+++.++|+|++++++++.. +..++++||+++
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~   79 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKG-EPLMLVMELAPL   79 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcC-CceEEEEEeCCC
Confidence            46899999999999743 2   26899999876643 345678889999999999999999998754 467999999999


Q ss_pred             CCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc--------------------------
Q 039276          113 GSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT--------------------------  166 (263)
Q Consensus       113 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~--------------------------  166 (263)
                      ++|.+++.... .+++..+..++.|++.||+|||+.+++|+||+|+||+.+...                          
T Consensus        80 ~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~~  158 (257)
T cd05060          80 GPLLKYLKKRR-EIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAG  158 (257)
T ss_pred             CcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccccCc
Confidence            99999998765 488999999999999999999999999999999999953321                          


Q ss_pred             cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccccc
Q 039276          167 LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFM  233 (263)
Q Consensus       167 ~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (263)
                      .++..|+||            |||||||++|+|++ |..||.....  ..+........                  ..+
T Consensus       159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~--~~~~~~~~~~~------------------~~~  218 (257)
T cd05060         159 RWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG--AEVIAMLESGE------------------RLP  218 (257)
T ss_pred             cccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH--HHHHHHHHcCC------------------cCC
Confidence            123468999            99999999999998 9999864311  11111111110                  111


Q ss_pred             chHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          234 TKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       234 ~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .+..++..+.+++.+||..+|++|||+.+|
T Consensus       219 ~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l  248 (257)
T cd05060         219 RPEECPQEIYSIMLSCWKYRPEDRPTFSEL  248 (257)
T ss_pred             CCCCCCHHHHHHHHHHhcCChhhCcCHHHH
Confidence            234456679999999999999999999864

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=9.3e-34  Score=236.44  Aligned_cols=219  Identities=21%  Similarity=0.304  Sum_probs=162.8

Q ss_pred             ccccccceecccCceEEEEEEecC---------------CceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEee
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQD---------------GMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIIS   95 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~---------------~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~   95 (263)
                      .+|+..+.||+|+||.||++....               ...|++|.+.... ......+.+|+++++.++|+|++++++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~   84 (295)
T cd05097           5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG   84 (295)
T ss_pred             HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence            358899999999999999987432               2348899987652 233556889999999999999999999


Q ss_pred             EeecCCeeEEEEeccCCCCHhhhhhhCC-----------CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc
Q 039276           96 SCSKDDFKALILECMPHGSLGKCLSTSN-----------YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI  164 (263)
Q Consensus        96 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----------~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~  164 (263)
                      ++...+..+++|||+++++|.+++....           ...++..+..++.|++.||+|||+++++|+||||+||+.+.
T Consensus        85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~~  164 (295)
T cd05097          85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGN  164 (295)
T ss_pred             EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEcC
Confidence            9999899999999999999999886432           12577888999999999999999999999999999999543


Q ss_pred             cc-------------------------cccccccCc------------chhhHHHHHHHHHh--CCCCCccccCCCchhh
Q 039276          165 QT-------------------------LATISYMAP------------DTYNFGIMIMETFS--GKKPTIKFFHGEMTLK  205 (263)
Q Consensus       165 ~~-------------------------~g~~~y~aP------------Dv~SlG~il~ell~--g~~Pf~~~~~~~~~~~  205 (263)
                      ..                         .++..|+||            |||||||++++|++  +..||..... ...+.
T Consensus       165 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~-~~~~~  243 (295)
T cd05097         165 HYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSD-EQVIE  243 (295)
T ss_pred             CCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccCh-HHHHH
Confidence            21                         124568888            99999999999998  5667654211 11111


Q ss_pred             hHhhhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          206 HWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .........      ..      ......+..+++.+.+++.+||+.+|++|||+++|
T Consensus       244 ~~~~~~~~~------~~------~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i  289 (295)
T cd05097         244 NTGEFFRNQ------GR------QIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKI  289 (295)
T ss_pred             HHHHhhhhc------cc------cccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHH
Confidence            110000000      00      00001122345679999999999999999999875

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=100.00  E-value=1.2e-33  Score=233.80  Aligned_cols=212  Identities=21%  Similarity=0.337  Sum_probs=165.4

Q ss_pred             ccccccceecccCceEEEEEEecC-----CceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeec-CCeeE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQD-----GMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSK-DDFKA  104 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~-----~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~  104 (263)
                      .+|...+.||+|+||.||+|....     +..|++|.+.... ......+.+|+.+++.++|+|++++++++.. ....+
T Consensus         6 ~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~   85 (280)
T cd05043           6 DRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPF   85 (280)
T ss_pred             hheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCE
Confidence            458889999999999999999654     6788999886542 3345667889999999999999999998765 46789


Q ss_pred             EEEeccCCCCHhhhhhhCC-------CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc-----------
Q 039276          105 LILECMPHGSLGKCLSTSN-------YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT-----------  166 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~-----------  166 (263)
                      +++|++++++|.+++....       ..+++..+..++.|++.||+|||+.+++|+||+|+||+.....           
T Consensus        86 ~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g~~~  165 (280)
T cd05043          86 VLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDNALSR  165 (280)
T ss_pred             EEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCCCCcc
Confidence            9999999999999986532       2378889999999999999999999999999999999853311           


Q ss_pred             --------------cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhh
Q 039276          167 --------------LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKV  219 (263)
Q Consensus       167 --------------~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~  219 (263)
                                    .++..|+||            |||||||+++|+++ |+.||....  ...+..+....        
T Consensus       166 ~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~--~~~~~~~~~~~--------  235 (280)
T cd05043         166 DLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEID--PFEMAAYLKDG--------  235 (280)
T ss_pred             cccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCC--HHHHHHHHHcC--------
Confidence                          234568999            99999999999999 999986421  11111111110        


Q ss_pred             hhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          220 VSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                                .+......+++++.+++.+||..+|++|||+.+|
T Consensus       236 ----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~  269 (280)
T cd05043         236 ----------YRLAQPINCPDELFAVMACCWALDPEERPSFSQL  269 (280)
T ss_pred             ----------CCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHH
Confidence                      0011123355679999999999999999999764

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=100.00  E-value=2.9e-33  Score=229.83  Aligned_cols=210  Identities=19%  Similarity=0.272  Sum_probs=163.6

Q ss_pred             cccccceecccCceEEEEEEe-cCCceEEEEEeecCC-----CchHHHHHHHHHHHhhcCCCcceeEeeEeecC--CeeE
Q 039276           33 LFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY-----GGAFKNLDVECNMMKIIRHQNLIKIISSCSKD--DFKA  104 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~-----~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~--~~~~  104 (263)
                      .|+..+.||+|+||.||.+.. .++..|++|.+....     ....+.+.+|+++++.++|+|++++++.+.+.  ...+
T Consensus         3 ~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~   82 (265)
T cd06652           3 NWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLS   82 (265)
T ss_pred             cceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEE
Confidence            488899999999999999984 558999999986432     12345778899999999999999999988653  4678


Q ss_pred             EEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-------------------
Q 039276          105 LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-------------------  165 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-------------------  165 (263)
                      +++||+++++|.+++..... +++..+..++.|++.||+|||+.+++|+||+|+||+.+..                   
T Consensus        83 ~v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~  161 (265)
T cd06652          83 IFMEHMPGGSIKDQLKSYGA-LTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICL  161 (265)
T ss_pred             EEEEecCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCccccccccccc
Confidence            99999999999999876543 7888889999999999999999999999999999995321                   


Q ss_pred             -------ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccc
Q 039276          166 -------TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLS  226 (263)
Q Consensus       166 -------~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (263)
                             ..++..|+||            |||||||++|||++|+.||...... ..+....                  
T Consensus       162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-~~~~~~~------------------  222 (265)
T cd06652         162 SGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAM-AAIFKIA------------------  222 (265)
T ss_pred             cccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchH-HHHHHHh------------------
Confidence                   1356679999            9999999999999999998632111 0000000                  


Q ss_pred             cccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          227 REDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       227 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ........+...+..+.+++.+|+. +|++||+++||
T Consensus       223 ~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~i  258 (265)
T cd06652         223 TQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADEL  258 (265)
T ss_pred             cCCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHH
Confidence            0000111244556678899999995 99999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=100.00  E-value=1.8e-33  Score=231.81  Aligned_cols=209  Identities=21%  Similarity=0.369  Sum_probs=157.4

Q ss_pred             cccceecccCceEEEEEEecC-Cc--eEEEEEeecC--CCchHHHHHHHHHHHhhcCCCcceeEeeEeecC------Cee
Q 039276           35 SESNLISRGGFGSIYKAKIQD-GM--EVVVKGFNLQ--YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKD------DFK  103 (263)
Q Consensus        35 ~~~~~lg~g~~g~v~~~~~~~-~~--~v~vK~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~------~~~  103 (263)
                      ...+.||+|+||.||+|.+.. +.  .+++|.++..  .......+.+|+++++.++|+||+++++.+...      ...
T Consensus         2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   81 (272)
T cd05075           2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP   81 (272)
T ss_pred             ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence            456789999999999998543 32  6899988754  233456788899999999999999999976421      246


Q ss_pred             EEEEeccCCCCHhhhhhhC-----CCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc------------
Q 039276          104 ALILECMPHGSLGKCLSTS-----NYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT------------  166 (263)
Q Consensus       104 ~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~------------  166 (263)
                      ++++||+++++|.+++...     ...+++..+..++.|++.||+|||+++++|+||||+||+.+...            
T Consensus        82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~  161 (272)
T cd05075          82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSKK  161 (272)
T ss_pred             EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCcccc
Confidence            8999999999999887421     22378888999999999999999999999999999999953211            


Q ss_pred             -------------cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhh
Q 039276          167 -------------LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVV  220 (263)
Q Consensus       167 -------------~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (263)
                                   .+++.|++|            |||||||++|||++ |+.||.....  ..+.....           
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~~~~~~~~-----------  228 (272)
T cd05075         162 IYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN--SEIYDYLR-----------  228 (272)
T ss_pred             cCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHH-----------
Confidence                         134568877            99999999999999 8899864211  11111110           


Q ss_pred             hhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          221 SANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                       .      ....+.+..+++.+.+++.+||+.+|++|||+.+|
T Consensus       229 -~------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l  264 (272)
T cd05075         229 -Q------GNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETL  264 (272)
T ss_pred             -c------CCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHH
Confidence             0      00111233456679999999999999999999874

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=100.00  E-value=1.3e-33  Score=234.75  Aligned_cols=212  Identities=23%  Similarity=0.353  Sum_probs=164.7

Q ss_pred             ccccccceecccCceEEEEEEec------CCceEEEEEeecCCC-chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ------DGMEVVVKGFNLQYG-GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKA  104 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~------~~~~v~vK~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~  104 (263)
                      .+|+..+.||+|+||.||++...      ++..+++|.+..... ...+.+.+|+.++++++|+|++++++++.+....+
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~   84 (288)
T cd05050           5 NNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMC   84 (288)
T ss_pred             HhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccE
Confidence            45889999999999999999843      467899999875532 23456888999999999999999999999888999


Q ss_pred             EEEeccCCCCHhhhhhhCC---------------------CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccc
Q 039276          105 LILECMPHGSLGKCLSTSN---------------------YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQ  163 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~---------------------~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~  163 (263)
                      +++||+++++|.+++....                     ..+++..++.++.|++.||+|||.++++|+||+|+||+..
T Consensus        85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~  164 (288)
T cd05050          85 LLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVG  164 (288)
T ss_pred             EEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheEec
Confidence            9999999999999986432                     1267778899999999999999999999999999999954


Q ss_pred             ccc-------------------------cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhh
Q 039276          164 IQT-------------------------LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLK  205 (263)
Q Consensus       164 ~~~-------------------------~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~  205 (263)
                      ...                         .++..|+||            |||||||++|||++ |..||......     
T Consensus       165 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~-----  239 (288)
T cd05050         165 ENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHE-----  239 (288)
T ss_pred             CCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-----
Confidence            321                         123458888            99999999999997 88887532111     


Q ss_pred             hHhhhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          206 HWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +........        .       ..+.+..++.++.+++.+||+.+|++|||+.||
T Consensus       240 ~~~~~~~~~--------~-------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el  282 (288)
T cd05050         240 EVIYYVRDG--------N-------VLSCPDNCPLELYNLMRLCWSKLPSDRPSFASI  282 (288)
T ss_pred             HHHHHHhcC--------C-------CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHH
Confidence            111000000        0       001123456679999999999999999999875

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=100.00  E-value=1.7e-33  Score=234.10  Aligned_cols=213  Identities=20%  Similarity=0.303  Sum_probs=162.9

Q ss_pred             cccccccceecccCceEEEEEEec------CCceEEEEEeecCCC-chHHHHHHHHHHHhhcCCCcceeEeeEeecCCee
Q 039276           31 LFLFSESNLISRGGFGSIYKAKIQ------DGMEVVVKGFNLQYG-GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFK  103 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~~------~~~~v~vK~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~  103 (263)
                      .++|+..+.||+|+||.||+|...      .+..|++|.+..... .....+.+|+.+++.++|+|++++++.+.+....
T Consensus         5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   84 (288)
T cd05061           5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPT   84 (288)
T ss_pred             HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCc
Confidence            456999999999999999998743      245799998865432 2344577899999999999999999999988899


Q ss_pred             EEEEeccCCCCHhhhhhhCC---------CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc--------
Q 039276          104 ALILECMPHGSLGKCLSTSN---------YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT--------  166 (263)
Q Consensus       104 ~lv~e~~~~~~L~~~l~~~~---------~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~--------  166 (263)
                      +++|||+++|+|.+++....         .......+..++.|++.||.|||+++++|+||||+||+.....        
T Consensus        85 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~Dfg  164 (288)
T cd05061          85 LVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFG  164 (288)
T ss_pred             EEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEECcCC
Confidence            99999999999999997522         1135567888999999999999999999999999999854321        


Q ss_pred             -----------------cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCch
Q 039276          167 -----------------LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSV  216 (263)
Q Consensus       167 -----------------~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~  216 (263)
                                       .++..|+||            |||||||+++||++ |..||.....  .......        
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~--~~~~~~~--------  234 (288)
T cd05061         165 MTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN--EQVLKFV--------  234 (288)
T ss_pred             ccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHH--------
Confidence                             224568998            99999999999998 7888753211  1111110        


Q ss_pred             hhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          217 MKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                         ...       ...+.+..+++.+.+++.+||+.+|++|||+.++
T Consensus       235 ---~~~-------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l  271 (288)
T cd05061         235 ---MDG-------GYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEI  271 (288)
T ss_pred             ---HcC-------CCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence               000       0011123445679999999999999999999764

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3e-33  Score=230.38  Aligned_cols=214  Identities=21%  Similarity=0.275  Sum_probs=167.5

Q ss_pred             cccccccceecccCceEEEEEEe-cCCceEEEEEeecCCCchHHHHHHHHHHHhhc-CCCcceeEeeEeecCC------e
Q 039276           31 LFLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGAFKNLDVECNMMKII-RHQNLIKIISSCSKDD------F  102 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~------~  102 (263)
                      .++|+..+.||+|++|.||+|.. .+++.+++|.+..... ..+.+.+|+++++.+ +|+|++++++++.+..      .
T Consensus         5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~   83 (275)
T cd06608           5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQ   83 (275)
T ss_pred             hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceE
Confidence            35699999999999999999995 4578999999876643 346688899999998 7999999999986543      5


Q ss_pred             eEEEEeccCCCCHhhhhhhC---CCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc--------------
Q 039276          103 KALILECMPHGSLGKCLSTS---NYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ--------------  165 (263)
Q Consensus       103 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~--------------  165 (263)
                      .++++||+++++|.+++...   +..+++..+..++.|++.||+|||+.+++|+||+|+||+.+..              
T Consensus        84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~  163 (275)
T cd06608          84 LWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQL  163 (275)
T ss_pred             EEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccceec
Confidence            89999999999999988642   2348889999999999999999999999999999999995432              


Q ss_pred             ---------ccccccccCc-----------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhh
Q 039276          166 ---------TLATISYMAP-----------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKV  219 (263)
Q Consensus       166 ---------~~g~~~y~aP-----------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~  219 (263)
                               ..|+..|+||                 |||||||++++|++|+.||....... .......          
T Consensus       164 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~----------  232 (275)
T cd06608         164 DSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMR-ALFKIPR----------  232 (275)
T ss_pred             ccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHH-HHHHhhc----------
Confidence                     1356668888                 99999999999999999986421111 1111100          


Q ss_pred             hhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          220 VSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                             ........+..+++++.+++.+||..||++|||+.+|
T Consensus       233 -------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~l  269 (275)
T cd06608         233 -------NPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEEL  269 (275)
T ss_pred             -------cCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHH
Confidence                   0000111233466779999999999999999999874

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.2e-34  Score=242.92  Aligned_cols=200  Identities=18%  Similarity=0.189  Sum_probs=154.0

Q ss_pred             ecccCceEEEEEE-ecCCceEEEEEeecCCC---chHHHHHHHHHHHhhc---CCCcceeEeeEeecCCeeEEEEeccCC
Q 039276           40 ISRGGFGSIYKAK-IQDGMEVVVKGFNLQYG---GAFKNLDVECNMMKII---RHQNLIKIISSCSKDDFKALILECMPH  112 (263)
Q Consensus        40 lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~---~~~~~~~~e~~~l~~~---~h~~i~~~~~~~~~~~~~~lv~e~~~~  112 (263)
                      ||+|+||.||+|. ..+++.||+|++.....   ........|..++...   +||+|+++++.+.+....+++|||+++
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            6999999999998 45689999999975421   2233344566666554   699999999999999999999999999


Q ss_pred             CCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------cccc
Q 039276          113 GSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------TLAT  169 (263)
Q Consensus       113 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------~~g~  169 (263)
                      ++|..++..... +++..+..++.|++.||+|||+++++||||||+||+.+..                       ..|+
T Consensus        81 g~L~~~l~~~~~-~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt  159 (330)
T cd05586          81 GELFWHLQKEGR-FSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFCGT  159 (330)
T ss_pred             ChHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCccCC
Confidence            999998876544 8999999999999999999999999999999999985321                       2478


Q ss_pred             ccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchH
Q 039276          170 ISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKE  236 (263)
Q Consensus       170 ~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (263)
                      ..|+||             |||||||++|+|++|+.||.....     ..........        ..      +. ...
T Consensus       160 ~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~-----~~~~~~i~~~--------~~------~~-~~~  219 (330)
T cd05586         160 TEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDT-----QQMYRNIAFG--------KV------RF-PKN  219 (330)
T ss_pred             ccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCH-----HHHHHHHHcC--------CC------CC-CCc
Confidence            889999             999999999999999999863211     1111000000        00      00 012


Q ss_pred             HHHHHHHHhhccccccCcCCCCCc
Q 039276          237 QCMSFVFNLAMECTVESPNQRINA  260 (263)
Q Consensus       237 ~~~~~l~~l~~~cl~~~p~~Rpt~  260 (263)
                      .+++++.+++.+||+.||++||++
T Consensus       220 ~~~~~~~~li~~~L~~~P~~R~~~  243 (330)
T cd05586         220 VLSDEGRQFVKGLLNRNPQHRLGA  243 (330)
T ss_pred             cCCHHHHHHHHHHcCCCHHHCCCC
Confidence            346678999999999999999964

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=100.00  E-value=2.2e-33  Score=229.33  Aligned_cols=209  Identities=23%  Similarity=0.364  Sum_probs=164.2

Q ss_pred             ccccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEe-ecCCeeEEEEecc
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSC-SKDDFKALILECM  110 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-~~~~~~~lv~e~~  110 (263)
                      .+|...+.||+|++|.||++... +..+++|.+...  ...+.+.+|+.+++.++|+|++++++++ .+.+..++++||+
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~   82 (256)
T cd05082           6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM   82 (256)
T ss_pred             HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCC--chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence            35888999999999999999765 788999988644  2346788999999999999999999975 4556789999999


Q ss_pred             CCCCHhhhhhhCCC-cccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc--------------------ccc
Q 039276          111 PHGSLGKCLSTSNY-ILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT--------------------LAT  169 (263)
Q Consensus       111 ~~~~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~--------------------~g~  169 (263)
                      ++++|.+++..... .+++..+..++.|++.||+|||.++++|+||+|+||+.+.+.                    .++
T Consensus        83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~  162 (256)
T cd05082          83 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP  162 (256)
T ss_pred             CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceeccccCCCCccc
Confidence            99999999976443 378889999999999999999999999999999999954322                    224


Q ss_pred             ccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchH
Q 039276          170 ISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKE  236 (263)
Q Consensus       170 ~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (263)
                      ..|+||            |||||||++|||++ |+.||...     ........         +...      .....+.
T Consensus       163 ~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~-----~~~~~~~~---------~~~~------~~~~~~~  222 (256)
T cd05082         163 VKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI-----PLKDVVPR---------VEKG------YKMDAPD  222 (256)
T ss_pred             eeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCC-----CHHHHHHH---------HhcC------CCCCCCC
Confidence            468999            99999999999998 99997532     11111100         0000      0011234


Q ss_pred             HHHHHHHHhhccccccCcCCCCCccCC
Q 039276          237 QCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       237 ~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .+++.+.+++.+||+.+|++|||+.++
T Consensus       223 ~~~~~~~~li~~~l~~~p~~Rpt~~~l  249 (256)
T cd05082         223 GCPPVVYDVMKQCWHLDAATRPSFLQL  249 (256)
T ss_pred             CCCHHHHHHHHHHhcCChhhCcCHHHH
Confidence            556779999999999999999999864

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=2.9e-33  Score=228.74  Aligned_cols=202  Identities=21%  Similarity=0.332  Sum_probs=156.2

Q ss_pred             ceecccCceEEEEEEecC-C----------ceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEE
Q 039276           38 NLISRGGFGSIYKAKIQD-G----------MEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALI  106 (263)
Q Consensus        38 ~~lg~g~~g~v~~~~~~~-~----------~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv  106 (263)
                      +.||+|+||.||+|.... +          ..+++|.+...... ...+.+|+.+++.++|+|++++++++.. ...+++
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv   78 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV   78 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence            468999999999999543 3          25778877655333 5778889999999999999999999877 678999


Q ss_pred             EeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc--------------------
Q 039276          107 LECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT--------------------  166 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~--------------------  166 (263)
                      +||+++++|.+++......++...+..++.|++.||+|||+++++|+||||+||+.....                    
T Consensus        79 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~  158 (259)
T cd05037          79 EEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITV  158 (259)
T ss_pred             EEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCccccc
Confidence            999999999999987654588889999999999999999999999999999999965332                    


Q ss_pred             ------cccccccCc--------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhccc
Q 039276          167 ------LATISYMAP--------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLL  225 (263)
Q Consensus       167 ------~g~~~y~aP--------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (263)
                            .++..|+||              |||||||+++||++ |..||.... ... ...+..           .....
T Consensus       159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~-~~~-~~~~~~-----------~~~~~  225 (259)
T cd05037         159 LSREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLS-SSE-KERFYQ-----------DQHRL  225 (259)
T ss_pred             ccccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCC-chh-HHHHHh-----------cCCCC
Confidence                  245668888              99999999999999 577765432 111 111100           00000


Q ss_pred             ccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          226 SREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       226 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                             +.+  ....+.+++.+||..+|++|||+.+|
T Consensus       226 -------~~~--~~~~~~~li~~~l~~~p~~Rpt~~~i  254 (259)
T cd05037         226 -------PMP--DCAELANLINQCWTYDPTKRPSFRAI  254 (259)
T ss_pred             -------CCC--CchHHHHHHHHHhccChhhCCCHHHH
Confidence                   000  11568999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=1.7e-33  Score=231.91  Aligned_cols=215  Identities=22%  Similarity=0.367  Sum_probs=165.8

Q ss_pred             cccccceecccCceEEEEEE-ecCCceEEEEEeecCCC----------chHHHHHHHHHHHhhcCCCcceeEeeEeecCC
Q 039276           33 LFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYG----------GAFKNLDVECNMMKIIRHQNLIKIISSCSKDD  101 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~----------~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~  101 (263)
                      .|...+.||+|++|.||+|. ..+++.+++|.+.....          ...+.+..|+.+++.++|+|++++++++...+
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   81 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE   81 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence            37788999999999999998 45688999998864211          11345678999999999999999999999889


Q ss_pred             eeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc----------------
Q 039276          102 FKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ----------------  165 (263)
Q Consensus       102 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~----------------  165 (263)
                      ..++++||+++++|.+++.... .++...+..++.|++.||.|||+++++|+||+|+||+....                
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~  160 (272)
T cd06629          82 YLSIFLEYVPGGSIGSCLRTYG-RFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDD  160 (272)
T ss_pred             ceEEEEecCCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeeccccccccc
Confidence            9999999999999999997764 38888999999999999999999999999999999995321                


Q ss_pred             ---------ccccccccCc--------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhh
Q 039276          166 ---------TLATISYMAP--------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSA  222 (263)
Q Consensus       166 ---------~~g~~~y~aP--------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (263)
                               ..|+..|+||              |+||||++++++++|..||.....    ........... ...... 
T Consensus       161 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~----~~~~~~~~~~~-~~~~~~-  234 (272)
T cd06629         161 IYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA----IAAMFKLGNKR-SAPPIP-  234 (272)
T ss_pred             cccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcch----HHHHHHhhccc-cCCcCC-
Confidence                     1356678888              999999999999999999853211    11111000000 000000 


Q ss_pred             cccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          223 NLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                               ......++.++.+++.+||..+|++|||+++|
T Consensus       235 ---------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~i  266 (272)
T cd06629         235 ---------PDVSMNLSPVALDFLNACFTINPDNRPTAREL  266 (272)
T ss_pred             ---------ccccccCCHHHHHHHHHHhcCChhhCCCHHHH
Confidence                     00123456779999999999999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=100.00  E-value=1.5e-33  Score=234.63  Aligned_cols=204  Identities=21%  Similarity=0.196  Sum_probs=165.7

Q ss_pred             cccccceecccCceEEEEEEe-cCCceEEEEEeecCC---CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEe
Q 039276           33 LFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      .|...+.||+|++|.||++.. .+++.+++|++....   ......+.+|+++++.++|+||+++++.+.++...+++||
T Consensus         2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   81 (290)
T cd05580           2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVME   81 (290)
T ss_pred             ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEe
Confidence            488899999999999999994 458999999987542   2345668889999999999999999999999999999999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc--------------------ccc
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ--------------------TLA  168 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~--------------------~~g  168 (263)
                      |+++++|.+++..... ++...+..++.|++.||.|||+.+++|+||+|+||+.+..                    ..+
T Consensus        82 ~~~~~~L~~~~~~~~~-l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~  160 (290)
T cd05580          82 YVPGGELFSHLRKSGR-FPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYTLCG  160 (290)
T ss_pred             cCCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCCCCCCCC
Confidence            9999999999977644 8899999999999999999999999999999999986432                    236


Q ss_pred             cccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchH
Q 039276          169 TISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKE  236 (263)
Q Consensus       169 ~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (263)
                      ++.|+||            ||||||+++++|++|+.||..... .......            ..        ...+.+.
T Consensus       161 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-~~~~~~~------------~~--------~~~~~~~  219 (290)
T cd05580         161 TPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNP-IQIYEKI------------LE--------GKVRFPS  219 (290)
T ss_pred             CccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHH------------hc--------CCccCCc
Confidence            7789999            999999999999999999864210 0000000            00        0011233


Q ss_pred             HHHHHHHHhhccccccCcCCCC
Q 039276          237 QCMSFVFNLAMECTVESPNQRI  258 (263)
Q Consensus       237 ~~~~~l~~l~~~cl~~~p~~Rp  258 (263)
                      ..++.+.+++.+||..+|.+|+
T Consensus       220 ~~~~~l~~li~~~l~~~p~~R~  241 (290)
T cd05580         220 FFSPDAKDLIRNLLQVDLTKRL  241 (290)
T ss_pred             cCCHHHHHHHHHHccCCHHHcc
Confidence            3466789999999999999998

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-35  Score=271.45  Aligned_cols=212  Identities=22%  Similarity=0.320  Sum_probs=174.7

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEe
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      .+...+.++|.|.||.||.|. ..+|.-.|+|-+....  ....+.+.+|..++..++|||+|+++|+-...+..+|.||
T Consensus      1235 ~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFME 1314 (1509)
T KOG4645|consen 1235 FRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFME 1314 (1509)
T ss_pred             eeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHH
Confidence            458889999999999999999 6668889999987663  3345667889999999999999999999988889999999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------  165 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------  165 (263)
                      ||.+|+|.+.+..++- .++.....+-.|++.|++|||+.|||||||||.||++..+                       
T Consensus      1315 yC~~GsLa~ll~~gri-~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~ 1393 (1509)
T KOG4645|consen 1315 YCEGGSLASLLEHGRI-EDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPG 1393 (1509)
T ss_pred             HhccCcHHHHHHhcch-hhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchhcCCH
Confidence            9999999999976543 6666677788999999999999999999999999995432                       


Q ss_pred             ----ccccccccCc---------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccc
Q 039276          166 ----TLATISYMAP---------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLS  226 (263)
Q Consensus       166 ----~~g~~~y~aP---------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (263)
                          ..||+.||||               ||||+||+..||+||+.||....+.               ..-.....+  
T Consensus      1394 el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne---------------~aIMy~V~~-- 1456 (1509)
T KOG4645|consen 1394 ELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE---------------WAIMYHVAA-- 1456 (1509)
T ss_pred             HHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch---------------hHHHhHHhc--
Confidence                3689999999               9999999999999999998764322               111111111  


Q ss_pred             cccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          227 REDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       227 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                        +-.++.|..++++-++++.+||+.||++|.++.||
T Consensus      1457 --gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~ql 1491 (1509)
T KOG4645|consen 1457 --GHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQL 1491 (1509)
T ss_pred             --cCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHH
Confidence              11223466688999999999999999999998653

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=100.00  E-value=2.2e-33  Score=232.54  Aligned_cols=212  Identities=19%  Similarity=0.281  Sum_probs=164.3

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCCCchHHHHHHHHHHHhhc-CCCcceeEeeEeec------CCee
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGAFKNLDVECNMMKII-RHQNLIKIISSCSK------DDFK  103 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~------~~~~  103 (263)
                      +.|+..+.+|+|+||.||+|.. .+++.+++|.+.... .....+..|+.+++.+ +|+|++++++++..      ....
T Consensus        16 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~   94 (282)
T cd06636          16 GIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQL   94 (282)
T ss_pred             hhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEE
Confidence            4589999999999999999994 568899999987653 2345677888888888 79999999999853      4578


Q ss_pred             EEEEeccCCCCHhhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------
Q 039276          104 ALILECMPHGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------  165 (263)
Q Consensus       104 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------  165 (263)
                      +++|||+++++|.+++.... ..+++..+..++.|++.||+|||+++++|+|++|+||+....                 
T Consensus        95 ~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~  174 (282)
T cd06636          95 WLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT  174 (282)
T ss_pred             EEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchhhhhcc
Confidence            99999999999999887643 237788889999999999999999999999999999995421                 


Q ss_pred             ------ccccccccCc-----------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhh
Q 039276          166 ------TLATISYMAP-----------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSA  222 (263)
Q Consensus       166 ------~~g~~~y~aP-----------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (263)
                            ..|+..|+||                 |||||||++|||++|+.||..........             . +..
T Consensus       175 ~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~-------------~-~~~  240 (282)
T cd06636         175 VGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALF-------------L-IPR  240 (282)
T ss_pred             ccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhh-------------h-Hhh
Confidence                  2356678887                 99999999999999999986421110000             0 000


Q ss_pred             cccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          223 NLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .     .........++.++.+++.+||+.||.+|||+.||
T Consensus       241 ~-----~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~el  276 (282)
T cd06636         241 N-----PPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQL  276 (282)
T ss_pred             C-----CCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHH
Confidence            0     00001123456779999999999999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=100.00  E-value=2.8e-33  Score=228.46  Aligned_cols=209  Identities=24%  Similarity=0.451  Sum_probs=166.6

Q ss_pred             cccceecccCceEEEEEEecC-C----ceEEEEEeecCCCc-hHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEe
Q 039276           35 SESNLISRGGFGSIYKAKIQD-G----MEVVVKGFNLQYGG-AFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        35 ~~~~~lg~g~~g~v~~~~~~~-~----~~v~vK~~~~~~~~-~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      +..+.||.|+||.||++.+.. +    ..+++|.+...... ..+.+..|++.++.++|+|++++++++.+.+..+++||
T Consensus         2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e   81 (258)
T smart00219        2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME   81 (258)
T ss_pred             cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence            456789999999999999543 3    78999999766433 56788899999999999999999999999899999999


Q ss_pred             ccCCCCHhhhhhhCCCc-ccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc---------------------
Q 039276          109 CMPHGSLGKCLSTSNYI-LDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT---------------------  166 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~-~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~---------------------  166 (263)
                      ++++++|.+++...... +++..+..++.|++.||++||+.+++|+||+|+||+.+...                     
T Consensus        82 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~  161 (258)
T smart00219       82 YMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKK  161 (258)
T ss_pred             ccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceeccccccccc
Confidence            99999999999765444 89999999999999999999999999999999999954432                     


Q ss_pred             ---cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccc
Q 039276          167 ---LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDE  230 (263)
Q Consensus       167 ---~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (263)
                         .++..|+||            ||||||+++++|++ |..||.... ........             ...      .
T Consensus       162 ~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~-~~~~~~~~-------------~~~------~  221 (258)
T smart00219      162 KGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMS-NEEVLEYL-------------KKG------Y  221 (258)
T ss_pred             ccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCC-HHHHHHHH-------------hcC------C
Confidence               245678999            99999999999998 888875410 00101100             000      0


Q ss_pred             cccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          231 HFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       231 ~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ....+..++.++.+++.+|+..+|++|||+.|+
T Consensus       222 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l  254 (258)
T smart00219      222 RLPKPENCPPEIYKLMLQCWAEDPEDRPTFSEL  254 (258)
T ss_pred             CCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHH
Confidence            111233466779999999999999999999864

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=100.00  E-value=1.3e-33  Score=239.37  Aligned_cols=164  Identities=20%  Similarity=0.250  Sum_probs=142.7

Q ss_pred             cccccceecccCceEEEEEEe-cCCceEEEEEeecC---CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEe
Q 039276           33 LFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQ---YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      +|...+.||+|+||.||++.. .+++.||+|.+...   .......+.+|+.++..++|++|+++.+.+.+.+..|++||
T Consensus         2 ~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~E   81 (331)
T cd05624           2 DFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMD   81 (331)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence            588899999999999999994 45888999998753   22234457788999999999999999999999999999999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------  165 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------  165 (263)
                      |+++|+|.+++......+++..+..++.|++.||+|||+++++||||||+||+.+..                       
T Consensus        82 y~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~  161 (331)
T cd05624          82 YYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQSS  161 (331)
T ss_pred             CCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCceeec
Confidence            999999999998754458888999999999999999999999999999999985321                       


Q ss_pred             -ccccccccCc-----------------chhhHHHHHHHHHhCCCCCcc
Q 039276          166 -TLATISYMAP-----------------DTYNFGIMIMETFSGKKPTIK  196 (263)
Q Consensus       166 -~~g~~~y~aP-----------------Dv~SlG~il~ell~g~~Pf~~  196 (263)
                       ..|++.|+||                 |||||||++|||++|+.||..
T Consensus       162 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~  210 (331)
T cd05624         162 VAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYA  210 (331)
T ss_pred             cccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccC
Confidence             2478889998                 999999999999999999863

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=100.00  E-value=1.7e-33  Score=233.38  Aligned_cols=228  Identities=19%  Similarity=0.216  Sum_probs=165.9

Q ss_pred             ccccceecccCceEEEEEEe-cCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           34 FSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      |+..+.||.|++|.||+|.. .++..+++|.+....  ......+.+|+++++.++|+|++++++++.+.+..++++||+
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   81 (284)
T cd07860           2 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL   81 (284)
T ss_pred             ceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeecc
Confidence            77889999999999999984 468899999987543  223456788999999999999999999999989999999999


Q ss_pred             CCCCHhhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc-----------------------
Q 039276          111 PHGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT-----------------------  166 (263)
Q Consensus       111 ~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~-----------------------  166 (263)
                      . ++|.+++.... ..+++..+..++.|++.||+|||+.+++|+||+|+||+...+.                       
T Consensus        82 ~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~  160 (284)
T cd07860          82 H-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE  160 (284)
T ss_pred             c-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCccccccc
Confidence            6 58988886532 3478899999999999999999999999999999999954321                       


Q ss_pred             cccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCch--hhhhhh------ccc
Q 039276          167 LATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSV--MKVVSA------NLL  225 (263)
Q Consensus       167 ~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------~~~  225 (263)
                      .++..|+||             |||||||++|||+||+.||...... ..+............  ......      ...
T Consensus       161 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (284)
T cd07860         161 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFP  239 (284)
T ss_pred             cccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHHhCCCChhhhhhhhHHHHHHhhcc
Confidence            235668888             9999999999999999998642211 111111111111000  000000      000


Q ss_pred             c-cccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          226 S-REDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       226 ~-~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      . ...........+++++.+++.+||+.||++|||++++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~  278 (284)
T cd07860         240 KWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAA  278 (284)
T ss_pred             cccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHH
Confidence            0 0000000012355678999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>PHA03207 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1e-33  Score=245.16  Aligned_cols=225  Identities=16%  Similarity=0.160  Sum_probs=164.4

Q ss_pred             ccccccceecccCceEEEEEEec---CCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEe
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ---DGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~---~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      ..|...+.||.|+||.||++...   .+.+|++|.+...     ....+|+++++.++|+||+++++++......+++||
T Consensus        92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e  166 (392)
T PHA03207         92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMP  166 (392)
T ss_pred             CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEeh
Confidence            35999999999999999999743   3578899987643     234579999999999999999999998889999999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc------------------------
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI------------------------  164 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~------------------------  164 (263)
                      ++. ++|.+++.... .+++..++.++.|++.||+|||.++++||||||+||++..                        
T Consensus       167 ~~~-~~l~~~l~~~~-~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~  244 (392)
T PHA03207        167 KYK-CDLFTYVDRSG-PLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQC  244 (392)
T ss_pred             hcC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCcccccccc
Confidence            986 58988885433 4899999999999999999999999999999999998432                        


Q ss_pred             -cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCC--chhhhHhhhcCCCc----------hhhh
Q 039276          165 -QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGE--MTLKHWVNDLLPNS----------VMKV  219 (263)
Q Consensus       165 -~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~--~~~~~~~~~~~~~~----------~~~~  219 (263)
                       ...||+.|+||            |||||||++|||++|+.||.......  ..+...........          ....
T Consensus       245 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~  324 (392)
T PHA03207        245 YGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKH  324 (392)
T ss_pred             cccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHH
Confidence             12578899999            99999999999999999986532221  11222111111000          0000


Q ss_pred             hhhccc-cccccc---ccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          220 VSANLL-SREDEH---FMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       220 ~~~~~~-~~~~~~---~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ...... ......   .......+.++.+++.+||..||++|||+.|+
T Consensus       325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~  372 (392)
T PHA03207        325 FKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDI  372 (392)
T ss_pred             HHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHH
Confidence            000000 000000   00012335578899999999999999999874

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.8e-33  Score=230.48  Aligned_cols=209  Identities=23%  Similarity=0.320  Sum_probs=165.3

Q ss_pred             ccccceecccCceEEEEEEe-cCCceEEEEEeecC-CCchHHHHHHHHHHHhhcC---CCcceeEeeEeecCCeeEEEEe
Q 039276           34 FSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQ-YGGAFKNLDVECNMMKIIR---HQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~-~~~~~~~~~~e~~~l~~~~---h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      |+..+.||+|+||.||+|.. .++..+++|.+... .....+.+.+|+++++.++   |+|++++++.+.+....++++|
T Consensus         3 y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e   82 (277)
T cd06917           3 YQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIME   82 (277)
T ss_pred             hhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEe
Confidence            77889999999999999994 56899999998755 3344567788999999886   9999999999998889999999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------  165 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------  165 (263)
                      |+++++|.+++...  .+++..+..++.|++.||.|||+.+++|+||+|+||+.+..                       
T Consensus        83 ~~~~~~L~~~~~~~--~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~  160 (277)
T cd06917          83 YAEGGSVRTLMKAG--PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRST  160 (277)
T ss_pred             cCCCCcHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCcccccc
Confidence            99999999998654  47889999999999999999999999999999999995432                       


Q ss_pred             ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccc
Q 039276          166 TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHF  232 (263)
Q Consensus       166 ~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (263)
                      ..|+..|+||             |||||||++|+|++|+.||......     .......         ....+.     
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~-----~~~~~~~---------~~~~~~-----  221 (277)
T cd06917         161 FVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAF-----RAMMLIP---------KSKPPR-----  221 (277)
T ss_pred             ccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChh-----hhhhccc---------cCCCCC-----
Confidence            1356668888             9999999999999999998642111     0000000         000000     


Q ss_pred             cchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          233 MTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       233 ~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ......+.++.+++.+||+.||++||++.++
T Consensus       222 ~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~i  252 (277)
T cd06917         222 LEDNGYSKLLREFVAACLDEEPKERLSAEEL  252 (277)
T ss_pred             CCcccCCHHHHHHHHHHcCCCcccCcCHHHH
Confidence            0011245679999999999999999998764

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=1.1e-32  Score=229.00  Aligned_cols=219  Identities=18%  Similarity=0.192  Sum_probs=166.0

Q ss_pred             cccccceecccCceEEEEEEe-cCCceEEEEEeecCCC-chHHHHHHHHHHHhhcCCCcceeEeeEeec--CCeeEEEEe
Q 039276           33 LFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYG-GAFKNLDVECNMMKIIRHQNLIKIISSCSK--DDFKALILE  108 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~lv~e  108 (263)
                      +|+..+.||.|++|.||++.. .+++.+++|.+..... .....+.+|+++++.++|+||+++++++.+  .+..+++||
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e   81 (287)
T cd06621           2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAME   81 (287)
T ss_pred             ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEE
Confidence            488899999999999999995 4588999999876532 345678899999999999999999998854  346899999


Q ss_pred             ccCCCCHhhhhhh---CCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc--------------------
Q 039276          109 CMPHGSLGKCLST---SNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ--------------------  165 (263)
Q Consensus       109 ~~~~~~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~--------------------  165 (263)
                      |+++++|.+++..   ....++...+..++.|++.||+|||+.+++|+||+|+||+.+..                    
T Consensus        82 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~  161 (287)
T cd06621          82 YCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLAG  161 (287)
T ss_pred             ecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeeccccccccccccc
Confidence            9999999887653   23337888899999999999999999999999999999995432                    


Q ss_pred             -ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCC---chhhhHhhhcCCCchhhhhhhccccccc
Q 039276          166 -TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGE---MTLKHWVNDLLPNSVMKVVSANLLSRED  229 (263)
Q Consensus       166 -~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (263)
                       ..++..|+||            |||||||++|+|++|+.||.......   .....+........        +.    
T Consensus       162 ~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~--------~~----  229 (287)
T cd06621         162 TFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPE--------LK----  229 (287)
T ss_pred             cccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchh--------hc----
Confidence             1346678888            99999999999999999987542211   11111111100000        00    


Q ss_pred             ccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          230 EHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       230 ~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .........++++.+++.+||..+|++|||+.||
T Consensus       230 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~ei  263 (287)
T cd06621         230 DEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDM  263 (287)
T ss_pred             cCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHH
Confidence            0000012345679999999999999999999764

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=100.00  E-value=2.3e-33  Score=228.97  Aligned_cols=208  Identities=24%  Similarity=0.411  Sum_probs=163.5

Q ss_pred             ccccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccC
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMP  111 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~  111 (263)
                      .+|...+.||+|+||.||.+.. ++..+++|.+....  ....+.+|+.+++.++|+|++++++.+...+ .++++||++
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-~~~v~e~~~   81 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHNG-LYIVMELMS   81 (254)
T ss_pred             HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCCC-cEEEEECCC
Confidence            4589999999999999999875 47889999986542  3467888999999999999999999986654 699999999


Q ss_pred             CCCHhhhhhhCCC-cccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc--------------------cccc
Q 039276          112 HGSLGKCLSTSNY-ILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT--------------------LATI  170 (263)
Q Consensus       112 ~~~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~--------------------~g~~  170 (263)
                      +++|.+++..... .+++..+..++.|++.||.|||+.+++|+||+|+||+.+...                    ..+.
T Consensus        82 ~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  161 (254)
T cd05083          82 KGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLPV  161 (254)
T ss_pred             CCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceeccccCCCCCCCc
Confidence            9999999976432 378888999999999999999999999999999999854321                    1244


Q ss_pred             cccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHH
Q 039276          171 SYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQ  237 (263)
Q Consensus       171 ~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (263)
                      .|+||            |||||||+++||++ |+.||......  .+....            ...      .+...+..
T Consensus       162 ~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~--~~~~~~------------~~~------~~~~~~~~  221 (254)
T cd05083         162 KWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLK--EVKECV------------EKG------YRMEPPEG  221 (254)
T ss_pred             eecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHH--HHHHHH------------hCC------CCCCCCCc
Confidence            58888            99999999999998 99998642111  111110            000      01112334


Q ss_pred             HHHHHHHhhccccccCcCCCCCccCC
Q 039276          238 CMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       238 ~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +++++.+++.+||+.+|++||++++|
T Consensus       222 ~~~~~~~li~~~l~~~p~~Rp~~~~l  247 (254)
T cd05083         222 CPADVYVLMTSCWETEPKKRPSFHKL  247 (254)
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHH
Confidence            56779999999999999999999864

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=100.00  E-value=1.8e-33  Score=230.13  Aligned_cols=211  Identities=21%  Similarity=0.280  Sum_probs=169.9

Q ss_pred             ccccceecccCceEEEEEEec-CCceEEEEEeecCC---CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           34 FSESNLISRGGFGSIYKAKIQ-DGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~~-~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      |+..+.||+|+||.||++... ++..+++|.+....   ....+.+.+|++++++++|||++++++.+.+....++++||
T Consensus         2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   81 (258)
T cd05578           2 FELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDL   81 (258)
T ss_pred             ceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeC
Confidence            788899999999999999954 58999999997653   23466788999999999999999999999999999999999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc----------------------cc
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ----------------------TL  167 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~----------------------~~  167 (263)
                      +++++|..++.... .+++..+..++.|++.||.|||+.+++|+||+|+||+.+..                      ..
T Consensus        82 ~~~~~L~~~l~~~~-~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~  160 (258)
T cd05578          82 LLGGDLRYHLSQKV-KFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTSTS  160 (258)
T ss_pred             CCCCCHHHHHHhcC-CcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCccccccC
Confidence            99999999997653 48889999999999999999999999999999999995432                      24


Q ss_pred             ccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccch
Q 039276          168 ATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTK  235 (263)
Q Consensus       168 g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (263)
                      |+..|+||            |+||||+++|+|++|+.||......  ........         ...       .....+
T Consensus       161 ~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~---------~~~-------~~~~~~  222 (258)
T cd05578         161 GTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT--IRDQIRAK---------QET-------ADVLYP  222 (258)
T ss_pred             CChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc--HHHHHHHH---------hcc-------ccccCc
Confidence            56778999            9999999999999999998743221  01111100         000       111123


Q ss_pred             HHHHHHHHHhhccccccCcCCCCCc--cCC
Q 039276          236 EQCMSFVFNLAMECTVESPNQRINA--KEM  263 (263)
Q Consensus       236 ~~~~~~l~~l~~~cl~~~p~~Rpt~--~ev  263 (263)
                      ...+.++.+++.+||+.+|.+||++  +|+
T Consensus       223 ~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l  252 (258)
T cd05578         223 ATWSTEAIDAINKLLERDPQKRLGDNLKDL  252 (258)
T ss_pred             ccCcHHHHHHHHHHccCChhHcCCccHHHH
Confidence            4456779999999999999999998  553

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=100.00  E-value=9.9e-34  Score=234.94  Aligned_cols=229  Identities=22%  Similarity=0.280  Sum_probs=167.8

Q ss_pred             cccccceecccCceEEEEEEec-CCceEEEEEeecCCC--chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           33 LFSESNLISRGGFGSIYKAKIQ-DGMEVVVKGFNLQYG--GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~~-~~~~v~vK~~~~~~~--~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      .|+..+.||+|++|.||+|... +++.+++|.+.....  ...+.+.+|+++++.++|+|++++++++.+.+..++++||
T Consensus         2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   81 (286)
T cd07846           2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEF   81 (286)
T ss_pred             ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEec
Confidence            4888999999999999999954 588999998865422  2345677899999999999999999999999999999999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------c
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------T  166 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------~  166 (263)
                      +++++|..+...... +++..+..++.|++.||+|||+.+++|+|++|+||+.+..                       .
T Consensus        82 ~~~~~l~~~~~~~~~-~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~  160 (286)
T cd07846          82 VDHTVLDDLEKYPNG-LDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDY  160 (286)
T ss_pred             CCccHHHHHHhccCC-CCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccCcc
Confidence            999888887765433 7899999999999999999999999999999999995432                       1


Q ss_pred             cccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhc--CCCchhhhhhhc------cc
Q 039276          167 LATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDL--LPNSVMKVVSAN------LL  225 (263)
Q Consensus       167 ~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~------~~  225 (263)
                      .++..|+||             |||||||+++||++|+.||..... ...+.......  ............      ..
T Consensus       161 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (286)
T cd07846         161 VATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSD-IDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRL  239 (286)
T ss_pred             cceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCch-HHHHHHHHHHhCCCchhhHHHhccchHhhcccc
Confidence            356668888             999999999999999999853211 11111111000  000000000000      00


Q ss_pred             ccc---cccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          226 SRE---DEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       226 ~~~---~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ...   .........++..+.+++.+||+.+|++|||+.+|
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~i  280 (286)
T cd07846         240 PEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQL  280 (286)
T ss_pred             ccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHH
Confidence            000   00000123557789999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=100.00  E-value=3.9e-33  Score=228.51  Aligned_cols=206  Identities=19%  Similarity=0.339  Sum_probs=155.4

Q ss_pred             ceecccCceEEEEEEec----CCceEEEEEeecC-CCchHHHHHHHHHHHhhcCCCcceeEeeEee-cCCeeEEEEeccC
Q 039276           38 NLISRGGFGSIYKAKIQ----DGMEVVVKGFNLQ-YGGAFKNLDVECNMMKIIRHQNLIKIISSCS-KDDFKALILECMP  111 (263)
Q Consensus        38 ~~lg~g~~g~v~~~~~~----~~~~v~vK~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-~~~~~~lv~e~~~  111 (263)
                      +.||+|+||.||+|...    ....+++|.+... .....+.+.+|+.+++.++|+|++++++++. ..+..++++||++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~   80 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK   80 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence            46899999999999843    2457899988543 2344667888999999999999999999775 4556899999999


Q ss_pred             CCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc-------------------------
Q 039276          112 HGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT-------------------------  166 (263)
Q Consensus       112 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~-------------------------  166 (263)
                      +++|.+++.......++..+..++.|++.||+|||+.+++|+||+|+||+.+...                         
T Consensus        81 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~  160 (262)
T cd05058          81 HGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHT  160 (262)
T ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcceeecccc
Confidence            9999999976554467777888999999999999999999999999999954221                         


Q ss_pred             --cccccccCc------------chhhHHHHHHHHHhC-CCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccc
Q 039276          167 --LATISYMAP------------DTYNFGIMIMETFSG-KKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEH  231 (263)
Q Consensus       167 --~g~~~y~aP------------Dv~SlG~il~ell~g-~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (263)
                        .++..|+||            |||||||++|||++| ..||.....  ........           .       ...
T Consensus       161 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~--~~~~~~~~-----------~-------~~~  220 (262)
T cd05058         161 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDS--FDITVYLL-----------Q-------GRR  220 (262)
T ss_pred             cCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHh-----------c-------CCC
Confidence              124568998            999999999999995 556543210  00110000           0       001


Q ss_pred             ccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          232 FMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       232 ~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ...+..+++.+.+++.+||+.+|++||++.+|
T Consensus       221 ~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i  252 (262)
T cd05058         221 LLQPEYCPDPLYEVMLSCWHPKPEMRPTFSEL  252 (262)
T ss_pred             CCCCCcCCHHHHHHHHHHcCCChhhCCCHHHH
Confidence            11123345679999999999999999999874

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=100.00  E-value=4.8e-33  Score=229.04  Aligned_cols=210  Identities=21%  Similarity=0.303  Sum_probs=155.1

Q ss_pred             ceecccCceEEEEEEecC---CceEEEEEeecCCC-chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccCCC
Q 039276           38 NLISRGGFGSIYKAKIQD---GMEVVVKGFNLQYG-GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHG  113 (263)
Q Consensus        38 ~~lg~g~~g~v~~~~~~~---~~~v~vK~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~  113 (263)
                      +.||+|+||.||+|.+.+   +..+++|.+..... .....+.+|+.+++.++|+|++++++.+.+....+++|||++++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g   80 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG   80 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence            358999999999998543   45789998876532 23456788999999999999999999998888899999999999


Q ss_pred             CHhhhhhhCC----CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc------------------------
Q 039276          114 SLGKCLSTSN----YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ------------------------  165 (263)
Q Consensus       114 ~L~~~l~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~------------------------  165 (263)
                      +|.+++....    ...++..+..++.|++.|++|||+.+++|+||||+||+....                        
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~  160 (269)
T cd05087          81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPD  160 (269)
T ss_pred             cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcceeecCC
Confidence            9999987532    124566777899999999999999999999999999994421                        


Q ss_pred             -ccccccccCc-------------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcc
Q 039276          166 -TLATISYMAP-------------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANL  224 (263)
Q Consensus       166 -~~g~~~y~aP-------------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (263)
                       ..++..|+||                   |||||||+++||++ |+.||......+. .....    ..........  
T Consensus       161 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~-~~~~~----~~~~~~~~~~--  233 (269)
T cd05087         161 QLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQV-LTYTV----REQQLKLPKP--  233 (269)
T ss_pred             CcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHH-HHHHh----hcccCCCCCC--
Confidence             1234557777                   99999999999996 9999864322211 10000    0000000000  


Q ss_pred             cccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          225 LSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       225 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                              ......++.+.+++.+|+ .+|++|||++||
T Consensus       234 --------~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l  263 (269)
T cd05087         234 --------RLKLPLSDRWYEVMQFCW-LQPEQRPSAEEV  263 (269)
T ss_pred             --------ccCCCCChHHHHHHHHHh-cCcccCCCHHHH
Confidence                    011234456888999998 589999999875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=100.00  E-value=3.4e-33  Score=230.13  Aligned_cols=206  Identities=24%  Similarity=0.426  Sum_probs=158.0

Q ss_pred             ceecccCceEEEEEEec-CCc--eEEEEEeecC-CCchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCeeEEEEeccCC
Q 039276           38 NLISRGGFGSIYKAKIQ-DGM--EVVVKGFNLQ-YGGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFKALILECMPH  112 (263)
Q Consensus        38 ~~lg~g~~g~v~~~~~~-~~~--~v~vK~~~~~-~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~  112 (263)
                      +.||+|+||.||+|... ++.  .+++|.+... .....+.+.+|+++++++ +|+|++++++++...+..+++|||+++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH   80 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence            36899999999999854 343  4688887643 233456788899999999 899999999999988899999999999


Q ss_pred             CCHhhhhhhCC---------------CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc-----------
Q 039276          113 GSLGKCLSTSN---------------YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT-----------  166 (263)
Q Consensus       113 ~~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~-----------  166 (263)
                      ++|.+++....               ..+++..+..++.|++.||+|||+.+++|+||||+||+.+...           
T Consensus        81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~~  160 (270)
T cd05047          81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR  160 (270)
T ss_pred             CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCcc
Confidence            99999986532               1267888999999999999999999999999999999964321           


Q ss_pred             -----------cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhh
Q 039276          167 -----------LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSA  222 (263)
Q Consensus       167 -----------~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (263)
                                 ..+..|+||            |||||||+++||++ |..||......     .....         ...
T Consensus       161 ~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~-----~~~~~---------~~~  226 (270)
T cd05047         161 GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-----ELYEK---------LPQ  226 (270)
T ss_pred             ccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHH-----HHHHH---------HhC
Confidence                       123458888            99999999999997 99998532110     11110         000


Q ss_pred             cccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          223 NLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .      .+...+..++.++.+++.+||..+|.+|||+.++
T Consensus       227 ~------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~i  261 (270)
T cd05047         227 G------YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQI  261 (270)
T ss_pred             C------CCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHH
Confidence            0      0111123455678999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=100.00  E-value=3.1e-33  Score=230.10  Aligned_cols=209  Identities=20%  Similarity=0.262  Sum_probs=154.0

Q ss_pred             eecccCceEEEEEEecC---CceEEEEEeecCCC-chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccCCCC
Q 039276           39 LISRGGFGSIYKAKIQD---GMEVVVKGFNLQYG-GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGS  114 (263)
Q Consensus        39 ~lg~g~~g~v~~~~~~~---~~~v~vK~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~  114 (263)
                      .||+|+||.||+|...+   ...+++|.+..... .....+.+|+++++.++|+||+++++.+.+....+++|||+++++
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~   81 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD   81 (269)
T ss_pred             cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence            58999999999997432   45678887754432 234567889999999999999999999999889999999999999


Q ss_pred             HhhhhhhCCC----cccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc------------------------
Q 039276          115 LGKCLSTSNY----ILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT------------------------  166 (263)
Q Consensus       115 L~~~l~~~~~----~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~------------------------  166 (263)
                      |.+++.....    ..++..+..++.|++.||+|||+++++|+||||+||+.+...                        
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~  161 (269)
T cd05042          82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKDC  161 (269)
T ss_pred             HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchheeccCC
Confidence            9999976432    145677788999999999999999999999999999854321                        


Q ss_pred             -cccccccCc-------------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhccc
Q 039276          167 -LATISYMAP-------------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLL  225 (263)
Q Consensus       167 -~g~~~y~aP-------------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (263)
                       .++..|+||                   |||||||++|||++ |..||......+ .+.......    ...+.     
T Consensus       162 ~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~-~~~~~~~~~----~~~~~-----  231 (269)
T cd05042         162 HAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ-VLKQVVREQ----DIKLP-----  231 (269)
T ss_pred             CCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH-HHHHHhhcc----CccCC-----
Confidence             124458888                   89999999999999 788876432111 111111000    00000     


Q ss_pred             ccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          226 SREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       226 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                           ....+..+++.+.+++..|| .||++|||+++|
T Consensus       232 -----~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v  263 (269)
T cd05042         232 -----KPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEV  263 (269)
T ss_pred             -----CCcccccCCHHHHHHHHHHh-cCcccccCHHHH
Confidence                 00112345566788888898 599999999875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=100.00  E-value=5.8e-33  Score=230.43  Aligned_cols=214  Identities=18%  Similarity=0.259  Sum_probs=163.1

Q ss_pred             cccccccceecccCceEEEEEEe-cCCceEEEEEeecCCCchHHHHHHHHHHHhhc-CCCcceeEeeEee-----cCCee
Q 039276           31 LFLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGAFKNLDVECNMMKII-RHQNLIKIISSCS-----KDDFK  103 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~-----~~~~~  103 (263)
                      ..+|+..+.||+|+||.||++.. .+++.+++|.+.... .....+.+|+.+++.+ +|+|++++++.+.     .++..
T Consensus        17 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~   95 (286)
T cd06638          17 SDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQL   95 (286)
T ss_pred             ccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeE
Confidence            45699999999999999999984 458899999886542 2335677899999998 7999999999873     34578


Q ss_pred             EEEEeccCCCCHhhhhhh---CCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc---------------
Q 039276          104 ALILECMPHGSLGKCLST---SNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ---------------  165 (263)
Q Consensus       104 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~---------------  165 (263)
                      +++|||+++++|.+++..   ....+++..+..++.|++.||.|||..+++|+||+|+||+....               
T Consensus        96 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~  175 (286)
T cd06638          96 WLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLT  175 (286)
T ss_pred             EEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCCceeecc
Confidence            999999999999988753   22337888899999999999999999999999999999984321               


Q ss_pred             --------ccccccccCc-----------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhh
Q 039276          166 --------TLATISYMAP-----------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVV  220 (263)
Q Consensus       166 --------~~g~~~y~aP-----------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (263)
                              ..|+..|+||                 |||||||+++||++|+.||.....    ....... ...      
T Consensus       176 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~----~~~~~~~-~~~------  244 (286)
T cd06638         176 STRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHP----MRALFKI-PRN------  244 (286)
T ss_pred             cCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCch----hHHHhhc-ccc------
Confidence                    2366778888                 999999999999999999864211    1111000 000      


Q ss_pred             hhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          221 SANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                             .......+..++.++.+++.+||+.+|++|||+.||
T Consensus       245 -------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~el  280 (286)
T cd06638         245 -------PPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDL  280 (286)
T ss_pred             -------CCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHH
Confidence                   000001122345569999999999999999999874

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=100.00  E-value=3.4e-33  Score=235.11  Aligned_cols=213  Identities=24%  Similarity=0.375  Sum_probs=164.3

Q ss_pred             cccccccceecccCceEEEEEEec--------CCceEEEEEeecCC-CchHHHHHHHHHHHhhc-CCCcceeEeeEeecC
Q 039276           31 LFLFSESNLISRGGFGSIYKAKIQ--------DGMEVVVKGFNLQY-GGAFKNLDVECNMMKII-RHQNLIKIISSCSKD  100 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~~--------~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~  100 (263)
                      ..+|...+.||+|+||.||++...        ....+++|.+.... ......+..|+++++++ +|+||+++++++.+.
T Consensus        11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~   90 (314)
T cd05099          11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE   90 (314)
T ss_pred             HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence            356899999999999999999732        24568899887542 23455678899999999 699999999999988


Q ss_pred             CeeEEEEeccCCCCHhhhhhhCC---------------CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc
Q 039276          101 DFKALILECMPHGSLGKCLSTSN---------------YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ  165 (263)
Q Consensus       101 ~~~~lv~e~~~~~~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~  165 (263)
                      +..++++||+++++|.+++....               ..+++..+..++.|++.||.|||+++++|+||||+||++...
T Consensus        91 ~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~  170 (314)
T cd05099          91 GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTED  170 (314)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcCC
Confidence            88999999999999999996532               237788889999999999999999999999999999995432


Q ss_pred             c-------------------------cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhH
Q 039276          166 T-------------------------LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHW  207 (263)
Q Consensus       166 ~-------------------------~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~  207 (263)
                      .                         .++..|+||            |||||||++|||++ |..||.....  ..+...
T Consensus       171 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~--~~~~~~  248 (314)
T cd05099         171 NVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV--EELFKL  248 (314)
T ss_pred             CcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH--HHHHHH
Confidence            1                         122469999            99999999999999 8899753211  111111


Q ss_pred             hhhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          208 VNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ..            ..      .....+..++.++.+++.+||+.+|++|||+.+|
T Consensus       249 ~~------------~~------~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l  286 (314)
T cd05099         249 LR------------EG------HRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQL  286 (314)
T ss_pred             HH------------cC------CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHH
Confidence            00            00      0111234556679999999999999999998764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=3.7e-33  Score=230.92  Aligned_cols=211  Identities=20%  Similarity=0.332  Sum_probs=165.5

Q ss_pred             ccccccceecccCceEEEEEEec-CCc----eEEEEEeecCCC-chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ-DGM----EVVVKGFNLQYG-GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKAL  105 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~-~~~----~v~vK~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l  105 (263)
                      .+|+..+.||+|+||.||+|.+. ++.    .+++|.+..... .....+.+|+.+++.++|+|++++++++.. ...++
T Consensus         7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~   85 (279)
T cd05057           7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL   85 (279)
T ss_pred             HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence            45888999999999999999843 232    588898876543 345678889999999999999999999877 67899


Q ss_pred             EEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc-------------------
Q 039276          106 ILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT-------------------  166 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~-------------------  166 (263)
                      ++||+++++|.+++......+++..+..++.|++.||+|||+.+++|+||+|+||+.....                   
T Consensus        86 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~  165 (279)
T cd05057          86 ITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKE  165 (279)
T ss_pred             EEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccccCcccc
Confidence            9999999999999987655589999999999999999999999999999999999954321                   


Q ss_pred             ------cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccc
Q 039276          167 ------LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSR  227 (263)
Q Consensus       167 ------~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (263)
                            .++..|+||            |||||||+++|+++ |+.||.....  ..+.....            .     
T Consensus       166 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~~~~~------------~-----  226 (279)
T cd05057         166 YHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA--VEIPDLLE------------K-----  226 (279)
T ss_pred             eecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH--HHHHHHHh------------C-----
Confidence                  123568998            99999999999998 9999864211  11111111            0     


Q ss_pred             ccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          228 EDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       228 ~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                       ....+.+..++.++.+++.+||..+|++|||+.++
T Consensus       227 -~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l  261 (279)
T cd05057         227 -GERLPQPPICTIDVYMVLVKCWMIDAESRPTFKEL  261 (279)
T ss_pred             -CCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHH
Confidence             00111233455668999999999999999998764

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=100.00  E-value=5.3e-33  Score=229.78  Aligned_cols=209  Identities=22%  Similarity=0.310  Sum_probs=166.6

Q ss_pred             cccccceecccCceEEEEEEe-cCCceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           33 LFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      -|+..+.||.|+||.||+|.. .++..+++|.+.... ....+.+.+|+.+++.++|+|++++++.+.++...++++||+
T Consensus         5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06641           5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL   84 (277)
T ss_pred             hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence            478889999999999999984 468899999986543 234566788999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc-----------------------c
Q 039276          111 PHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT-----------------------L  167 (263)
Q Consensus       111 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~-----------------------~  167 (263)
                      ++++|.+++...  .+++..+..++.+++.++.+||+.+++|+||+|+||+.+...                       .
T Consensus        85 ~~~~l~~~i~~~--~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~  162 (277)
T cd06641          85 GGGSALDLLEPG--PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV  162 (277)
T ss_pred             CCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccchhhhcccc
Confidence            999999998653  378889999999999999999999999999999999854321                       3


Q ss_pred             ccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccch
Q 039276          168 ATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTK  235 (263)
Q Consensus       168 g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (263)
                      ++..|+||            |+|||||++++|++|..||.......  .....            ...      ......
T Consensus       163 ~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~--~~~~~------------~~~------~~~~~~  222 (277)
T cd06641         163 GTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMK--VLFLI------------PKN------NPPTLE  222 (277)
T ss_pred             CCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHH--HHHHH------------hcC------CCCCCC
Confidence            56678888            99999999999999999986421110  00000            000      001122


Q ss_pred             HHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          236 EQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       236 ~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ..++.++.+++.+||+.+|++||++.++
T Consensus       223 ~~~~~~~~~~i~~~l~~~p~~Rp~~~~~  250 (277)
T cd06641         223 GNYSKPLKEFVEACLNKEPSFRPTAKEL  250 (277)
T ss_pred             cccCHHHHHHHHHHccCChhhCcCHHHH
Confidence            3456678999999999999999998764

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.3e-34  Score=245.99  Aligned_cols=211  Identities=24%  Similarity=0.338  Sum_probs=176.4

Q ss_pred             ccccccceecccCceEEEEEEecC-CceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQD-GMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~-~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      .++....+||-|-||.||.|.|.. ...||||.++.+ .-...+|..|+.+++.++|||+|+++|+|.....+|||+|||
T Consensus       267 tdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED-tMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM  345 (1157)
T KOG4278|consen  267 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFM  345 (1157)
T ss_pred             hheeeeeccCCCcccceeeeeeeccceeeehhhhhhc-chhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecc
Confidence            457778899999999999999876 567899999866 345788999999999999999999999998888899999999


Q ss_pred             CCCCHhhhhhhCCCc-ccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc---------------------c-
Q 039276          111 PHGSLGKCLSTSNYI-LDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT---------------------L-  167 (263)
Q Consensus       111 ~~~~L~~~l~~~~~~-~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~---------------------~-  167 (263)
                      .+|+|.+|+++.++. ++....++++.||..|++||..+++|||||-.+|.|...+.                     . 
T Consensus       346 ~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAG  425 (1157)
T KOG4278|consen  346 CYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAG  425 (1157)
T ss_pred             cCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhhcCCceecccC
Confidence            999999999976554 67777889999999999999999999999999999854322                     1 


Q ss_pred             --ccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccc
Q 039276          168 --ATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHF  232 (263)
Q Consensus       168 --g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (263)
                        -..-|.||            |||+|||+|||+.| |-.||....     +.         .+..      +-+.+.|+
T Consensus       426 AKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGid-----lS---------qVY~------LLEkgyRM  485 (1157)
T KOG4278|consen  426 AKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGID-----LS---------QVYG------LLEKGYRM  485 (1157)
T ss_pred             ccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCcc-----HH---------HHHH------HHhccccc
Confidence              14448888            99999999999999 999976421     00         1111      22445666


Q ss_pred             cchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          233 MTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       233 ~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ..+.+|++.+.+||+.||+++|++||++.||
T Consensus       486 ~~PeGCPpkVYeLMraCW~WsPsDRPsFaei  516 (1157)
T KOG4278|consen  486 DGPEGCPPKVYELMRACWNWSPSDRPSFAEI  516 (1157)
T ss_pred             cCCCCCCHHHHHHHHHHhcCCcccCccHHHH
Confidence            7789999999999999999999999999874

>PHA03209 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=7.4e-34  Score=243.15  Aligned_cols=156  Identities=18%  Similarity=0.235  Sum_probs=133.7

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      ..|...+.||+|+||.||+|.. .++..||+|.....      ....|+.+++.++|+||+++++++......++++|++
T Consensus        66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~  139 (357)
T PHA03209         66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHY  139 (357)
T ss_pred             cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEcc
Confidence            4599999999999999999995 45778999974322      2245899999999999999999999999999999999


Q ss_pred             CCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc----------------------cccc
Q 039276          111 PHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI----------------------QTLA  168 (263)
Q Consensus       111 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~----------------------~~~g  168 (263)
                      . ++|.+++......+++..+..++.|++.||+|||.++++||||||+||+...                      ...|
T Consensus       140 ~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~g  218 (357)
T PHA03209        140 S-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLGLAG  218 (357)
T ss_pred             C-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccCcccccccc
Confidence            5 5898888766666899999999999999999999999999999999999532                      1247


Q ss_pred             cccccCc------------chhhHHHHHHHHHhCCCCC
Q 039276          169 TISYMAP------------DTYNFGIMIMETFSGKKPT  194 (263)
Q Consensus       169 ~~~y~aP------------Dv~SlG~il~ell~g~~Pf  194 (263)
                      +..|+||            |||||||++|||+++..|+
T Consensus       219 t~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~  256 (357)
T PHA03209        219 TVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI  256 (357)
T ss_pred             cccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence            8889999            9999999999999855554

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=100.00  E-value=8.4e-33  Score=229.16  Aligned_cols=228  Identities=18%  Similarity=0.224  Sum_probs=168.3

Q ss_pred             ccccceecccCceEEEEEEe-cCCceEEEEEeecCCC-chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccC
Q 039276           34 FSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYG-GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMP  111 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~  111 (263)
                      |+..+.||.|++|.||+|+. .++..|++|.+..... .....+.+|++++++++|+|++++++.+.+.+..++++||++
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   81 (284)
T cd07836           2 FKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMD   81 (284)
T ss_pred             ceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCC
Confidence            78899999999999999995 4688999999976532 334566789999999999999999999999999999999998


Q ss_pred             CCCHhhhhhhCC--CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------c
Q 039276          112 HGSLGKCLSTSN--YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------T  166 (263)
Q Consensus       112 ~~~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------~  166 (263)
                      + +|.+++....  ..+++..+..++.|++.||+|||+.+++|+||+|+||+.+..                       .
T Consensus        82 ~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~  160 (284)
T cd07836          82 K-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSNE  160 (284)
T ss_pred             c-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCccccccc
Confidence            6 8888886543  347899999999999999999999999999999999995432                       2


Q ss_pred             cccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCC---chhhhhhhc------c
Q 039276          167 LATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPN---SVMKVVSAN------L  224 (263)
Q Consensus       167 ~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~------~  224 (263)
                      .++..|++|             |||||||++++|++|+.||...... .............   ....+....      .
T Consensus       161 ~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (284)
T cd07836         161 VVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNE-DQLLKIFRIMGTPTESTWPGISQLPEYKPTFP  239 (284)
T ss_pred             cccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHHHHhCCCChhhHHHHhcCchhccccc
Confidence            346678888             9999999999999999998643221 1111111111000   000000000      0


Q ss_pred             cccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          225 LSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       225 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .............++..+.+++.+|++.||.+||++.+|
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~  278 (284)
T cd07836         240 RYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDA  278 (284)
T ss_pred             CCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHH
Confidence            000000000122456778999999999999999998764

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=100.00  E-value=3e-33  Score=231.78  Aligned_cols=228  Identities=20%  Similarity=0.210  Sum_probs=166.2

Q ss_pred             ccccceecccCceEEEEEEe-cCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           34 FSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      |+..+.||.|++|.||+|.. .++..|++|.+....  ......+.+|+++++.++|+|++++++++.+.+..++++||+
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~   80 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL   80 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence            56788999999999999984 569999999987653  223456778999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------c
Q 039276          111 PHGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------T  166 (263)
Q Consensus       111 ~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------~  166 (263)
                      + ++|.+++.... ..+++..+..++.|++.||+|||+++++|+||+|+||+.+..                       .
T Consensus        81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~  159 (283)
T cd07835          81 D-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTHE  159 (283)
T ss_pred             C-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCcc
Confidence            5 59999887654 248899999999999999999999999999999999995421                       1


Q ss_pred             cccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCc--h-------hhhhhhcc
Q 039276          167 LATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNS--V-------MKVVSANL  224 (263)
Q Consensus       167 ~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~  224 (263)
                      .++..|+||             ||||||+++|+|++|+.||....... .+...........  .       ........
T Consensus       160 ~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (283)
T cd07835         160 VVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEID-QLFRIFRTLGTPDEDVWPGVTSLPDYKPTFP  238 (283)
T ss_pred             ccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCChHHhhhhhhchhhhhhcc
Confidence            236668888             99999999999999999986421111 1111111000000  0       00000000


Q ss_pred             cccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          225 LSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       225 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .............+++.+.+++.+||+.+|++|||++|+
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~i  277 (283)
T cd07835         239 KWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAA  277 (283)
T ss_pred             cccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHH
Confidence            000000001123445678999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=100.00  E-value=9.4e-33  Score=229.28  Aligned_cols=214  Identities=25%  Similarity=0.334  Sum_probs=171.5

Q ss_pred             cccccccceecccCceEEEEEEec-CCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           31 LFLFSESNLISRGGFGSIYKAKIQ-DGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~~-~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      ...|+..+.+|+|++|.||++... ++..+++|.+..... ....+.+|++.++.++|+|++++++.+...+..++++||
T Consensus        18 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   96 (286)
T cd06614          18 RELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEY   96 (286)
T ss_pred             cccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEec
Confidence            345888999999999999999954 688999999986644 456788899999999999999999999999999999999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc-----------------------
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT-----------------------  166 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~-----------------------  166 (263)
                      +++++|.+++......++...+..++.|++.||+|||+.+++|+||+|+||+.....                       
T Consensus        97 ~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~  176 (286)
T cd06614          97 MDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNSV  176 (286)
T ss_pred             cCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchhhhccc
Confidence            999999999987653489999999999999999999999999999999999854321                       


Q ss_pred             cccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccc
Q 039276          167 LATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT  234 (263)
Q Consensus       167 ~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (263)
                      .++..|++|            |||||||++|+|++|+.||.....    .....         .+.....     .....
T Consensus       177 ~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~----~~~~~---------~~~~~~~-----~~~~~  238 (286)
T cd06614         177 VGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPP----LRALF---------LITTKGI-----PPLKN  238 (286)
T ss_pred             cCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCH----HHHHH---------HHHhcCC-----CCCcc
Confidence            245678998            999999999999999999753211    10000         0000000     00112


Q ss_pred             hHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          235 KEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       235 ~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ...++.++.+++.+||+.+|.+|||+.+|
T Consensus       239 ~~~~~~~l~~li~~~l~~~p~~Rpt~~~i  267 (286)
T cd06614         239 PEKWSPEFKDFLNKCLVKDPEKRPSAEEL  267 (286)
T ss_pred             hhhCCHHHHHHHHHHhccChhhCcCHHHH
Confidence            23356779999999999999999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=100.00  E-value=2.5e-33  Score=238.74  Aligned_cols=213  Identities=21%  Similarity=0.333  Sum_probs=161.6

Q ss_pred             ccccccceecccCceEEEEEEe------cCCceEEEEEeecCC-CchHHHHHHHHHHHhhc-CCCcceeEeeEeecC-Ce
Q 039276           32 FLFSESNLISRGGFGSIYKAKI------QDGMEVVVKGFNLQY-GGAFKNLDVECNMMKII-RHQNLIKIISSCSKD-DF  102 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~------~~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~-~~  102 (263)
                      ++|+..+.||+|+||.||+|.+      .+++.||||.+.... ......+.+|+.++..+ +|+||+++++++... ..
T Consensus         7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~   86 (343)
T cd05103           7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP   86 (343)
T ss_pred             hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCc
Confidence            4699999999999999999973      246789999997643 23455678899999999 689999999987654 56


Q ss_pred             eEEEEeccCCCCHhhhhhhCC-----------------------------------------------------------
Q 039276          103 KALILECMPHGSLGKCLSTSN-----------------------------------------------------------  123 (263)
Q Consensus       103 ~~lv~e~~~~~~L~~~l~~~~-----------------------------------------------------------  123 (263)
                      .+++|||+++|+|.+++....                                                           
T Consensus        87 ~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (343)
T cd05103          87 LMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEA  166 (343)
T ss_pred             eEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhh
Confidence            789999999999999886421                                                           


Q ss_pred             -------CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc-------------------------ccccc
Q 039276          124 -------YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT-------------------------LATIS  171 (263)
Q Consensus       124 -------~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~-------------------------~g~~~  171 (263)
                             ..+++..+..++.|++.||+|||+++++|+||||+||++....                         .++..
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~  246 (343)
T cd05103         167 EQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLK  246 (343)
T ss_pred             hhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcc
Confidence                   1256677788999999999999999999999999999954211                         12456


Q ss_pred             ccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHHH
Q 039276          172 YMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQC  238 (263)
Q Consensus       172 y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (263)
                      |+||            ||||||+++++|++ |..||........ +...            +...      .+.+.+..+
T Consensus       247 y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~-~~~~------------~~~~------~~~~~~~~~  307 (343)
T cd05103         247 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-FCRR------------LKEG------TRMRAPDYT  307 (343)
T ss_pred             eECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHH-HHHH------------Hhcc------CCCCCCCCC
Confidence            8999            99999999999997 9999864321111 1000            0000      001112234


Q ss_pred             HHHHHHhhccccccCcCCCCCccCC
Q 039276          239 MSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       239 ~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ++++.+++.+||+.+|++|||+.||
T Consensus       308 ~~~~~~~~~~cl~~~p~~Rps~~ei  332 (343)
T cd05103         308 TPEMYQTMLDCWHGEPSQRPTFSEL  332 (343)
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHH
Confidence            5568999999999999999999875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=100.00  E-value=8.8e-33  Score=232.88  Aligned_cols=212  Identities=21%  Similarity=0.299  Sum_probs=166.9

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCC---CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      ..|...+.||+|+||.||++. ..++..+++|.+....   ......+.+|+++++.++|+|++++++++.+....++++
T Consensus        25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  104 (317)
T cd06635          25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVM  104 (317)
T ss_pred             hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEE
Confidence            448899999999999999999 4568899999987542   223456788999999999999999999999988999999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-------------------ccc
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-------------------TLA  168 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-------------------~~g  168 (263)
                      ||+++ ++.+.+......+++.++..++.+++.||.|||+.+++|+||+|+||+....                   ..|
T Consensus       105 e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~  183 (317)
T cd06635         105 EYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPANSFVG  183 (317)
T ss_pred             eCCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCCcccccC
Confidence            99975 7877776555558899999999999999999999999999999999996432                   245


Q ss_pred             cccccCc---------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccccc
Q 039276          169 TISYMAP---------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFM  233 (263)
Q Consensus       169 ~~~y~aP---------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (263)
                      +..|+||               |||||||+++||++|+.||...... ..+..+....            .      ...
T Consensus       184 ~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~-~~~~~~~~~~------------~------~~~  244 (317)
T cd06635         184 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-SALYHIAQNE------------S------PTL  244 (317)
T ss_pred             CccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHH-HHHHHHHhcc------------C------CCC
Confidence            6778888               9999999999999999998642111 1111111100            0      001


Q ss_pred             chHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          234 TKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       234 ~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ....+++.+.+++.+||+.+|++||++.+|
T Consensus       245 ~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i  274 (317)
T cd06635         245 QSNEWSDYFRNFVDSCLQKIPQDRPTSEEL  274 (317)
T ss_pred             CCccccHHHHHHHHHHccCCcccCcCHHHH
Confidence            123456679999999999999999998764

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=100.00  E-value=3.8e-33  Score=236.78  Aligned_cols=212  Identities=23%  Similarity=0.389  Sum_probs=163.6

Q ss_pred             ccccccceecccCceEEEEEEec--------CCceEEEEEeecCC-CchHHHHHHHHHHHhhc-CCCcceeEeeEeecCC
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ--------DGMEVVVKGFNLQY-GGAFKNLDVECNMMKII-RHQNLIKIISSCSKDD  101 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~--------~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~  101 (263)
                      .+|...+.||+|+||.||++...        ....+++|.+.... ....+.+.+|+++++++ +|+||+++++++...+
T Consensus        12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~   91 (334)
T cd05100          12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG   91 (334)
T ss_pred             hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence            35889999999999999999732        12368999887542 33456788999999999 8999999999999888


Q ss_pred             eeEEEEeccCCCCHhhhhhhCC---------------CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc
Q 039276          102 FKALILECMPHGSLGKCLSTSN---------------YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT  166 (263)
Q Consensus       102 ~~~lv~e~~~~~~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~  166 (263)
                      ..++++||+++++|.+++....               ..+++..+..++.|++.||+|||+++++|+||+|+||+.....
T Consensus        92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~~~  171 (334)
T cd05100          92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTEDN  171 (334)
T ss_pred             ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCC
Confidence            9999999999999999987532               1267788889999999999999999999999999999954211


Q ss_pred             -------------------------cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHh
Q 039276          167 -------------------------LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWV  208 (263)
Q Consensus       167 -------------------------~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~  208 (263)
                                               .++..|+||            |||||||++|||++ |..||....     ...+.
T Consensus       172 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~-----~~~~~  246 (334)
T cd05100         172 VMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP-----VEELF  246 (334)
T ss_pred             cEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCC-----HHHHH
Confidence                                     123569999            99999999999998 888875321     11111


Q ss_pred             hhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          209 NDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ..         +...      .....+..++.++.+++.+||+.+|.+|||+.||
T Consensus       247 ~~---------~~~~------~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~el  286 (334)
T cd05100         247 KL---------LKEG------HRMDKPANCTHELYMIMRECWHAVPSQRPTFKQL  286 (334)
T ss_pred             HH---------HHcC------CCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHH
Confidence            10         0000      0111233455679999999999999999999864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=100.00  E-value=7.5e-33  Score=232.83  Aligned_cols=228  Identities=20%  Similarity=0.211  Sum_probs=162.4

Q ss_pred             cccceecccCceEEEEEEecCCceEEEEEeecC--CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccCC
Q 039276           35 SESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQ--YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPH  112 (263)
Q Consensus        35 ~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~  112 (263)
                      ..++.+|.|+++.++++.. +++.||+|++...  .....+.+.+|+++++.++|+||+++++.+.+.+..++++||+++
T Consensus         5 ~i~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~   83 (314)
T cd08216           5 LIGKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAY   83 (314)
T ss_pred             hhhHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCC
Confidence            3344445555555555444 5899999999765  334567788999999999999999999999999999999999999


Q ss_pred             CCHhhhhhhC-CCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc-------------------------
Q 039276          113 GSLGKCLSTS-NYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT-------------------------  166 (263)
Q Consensus       113 ~~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~-------------------------  166 (263)
                      ++|.+++... ...+++..+..++.|++.||+|||+++++|+||+|+||+.+...                         
T Consensus        84 ~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~  163 (314)
T cd08216          84 GSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHD  163 (314)
T ss_pred             CCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeecccccccccccc
Confidence            9999998753 23478889999999999999999999999999999999964311                         


Q ss_pred             -----cccccccCc--------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcC---CCchhhhhhhcc
Q 039276          167 -----LATISYMAP--------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLL---PNSVMKVVSANL  224 (263)
Q Consensus       167 -----~g~~~y~aP--------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~  224 (263)
                           .++..|+||              |||||||+++||++|+.||..................   ............
T Consensus       164 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (314)
T cd08216         164 FPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSM  243 (314)
T ss_pred             ccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCc
Confidence                 234568888              9999999999999999999754222221111110000   000000000000


Q ss_pred             ----------cccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          225 ----------LSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       225 ----------~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                                ..............+.++.+++.+||+.||++|||++++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~l  292 (314)
T cd08216         244 SQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQL  292 (314)
T ss_pred             CcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHH
Confidence                      000001112234567789999999999999999999874

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-34  Score=249.26  Aligned_cols=219  Identities=18%  Similarity=0.261  Sum_probs=181.8

Q ss_pred             cccccccccccceecccCceEEEEEE-ecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEE
Q 039276           27 NFSGLFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKAL  105 (263)
Q Consensus        27 ~~~~~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l  105 (263)
                      ++...+.++....||.|+||+||++. ...+...|.|++.....+....+.-||++|..++||+|+++++.|.-.+.++|
T Consensus        27 dlnP~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwi  106 (1187)
T KOG0579|consen   27 DLNPRDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWI  106 (1187)
T ss_pred             cCCHHHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEE
Confidence            34445668899999999999999998 44466678999988888888899999999999999999999999988888999


Q ss_pred             EEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc---------------------
Q 039276          106 ILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI---------------------  164 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~---------------------  164 (263)
                      +.|||.||-+...+..-++.+.+.++..+..|++.||.|||++.|+|||||..|||...                     
T Consensus       107 liEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qk  186 (1187)
T KOG0579|consen  107 LIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQK  186 (1187)
T ss_pred             EEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccchhHHhh
Confidence            99999999999999888888999999999999999999999999999999999999432                     


Q ss_pred             --cccccccccCc-----------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccc
Q 039276          165 --QTLATISYMAP-----------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLL  225 (263)
Q Consensus       165 --~~~g~~~y~aP-----------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (263)
                        ...||+.||||                 ||||||++|.||.-+.+|-..    -.....++.              ..
T Consensus       187 RDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhe----lnpMRVllK--------------ia  248 (1187)
T KOG0579|consen  187 RDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHE----LNPMRVLLK--------------IA  248 (1187)
T ss_pred             hccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccc----cchHHHHHH--------------Hh
Confidence              34799999999                 999999999999999999322    111111111              11


Q ss_pred             ccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          226 SREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       226 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ..++.-...+...+..+.+++.+||..||..||++.+|
T Consensus       249 KSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaql  286 (1187)
T KOG0579|consen  249 KSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQL  286 (1187)
T ss_pred             hcCCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHH
Confidence            11222223456777789999999999999999999874

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=100.00  E-value=9.9e-33  Score=226.08  Aligned_cols=213  Identities=19%  Similarity=0.270  Sum_probs=170.9

Q ss_pred             cccccceecccCceEEEEEEec-CCceEEEEEeecCCC-chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           33 LFSESNLISRGGFGSIYKAKIQ-DGMEVVVKGFNLQYG-GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~~-~~~~v~vK~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      .|+..+.||+|++|.||++... +++.+++|.+..... .....+.+|+..++.++|+|++++++.+...+..++++||+
T Consensus         2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~   81 (264)
T cd06623           2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYM   81 (264)
T ss_pred             cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEec
Confidence            3788899999999999999954 589999999877643 45677889999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhcc-CCccccccCCCccccccc-----------------------c
Q 039276          111 PHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHF-GHSTHLLLKEDQSLTQIQ-----------------------T  166 (263)
Q Consensus       111 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~-~~i~h~dlk~~nil~~~~-----------------------~  166 (263)
                      ++++|.+++.... .+++..++.++.|++.|++|||+ .+++|+||+|+||+.+..                       .
T Consensus        82 ~~~~L~~~l~~~~-~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~  160 (264)
T cd06623          82 DGGSLADLLKKVG-KIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTF  160 (264)
T ss_pred             CCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCcccce
Confidence            9999999997654 38999999999999999999999 999999999999995432                       1


Q ss_pred             cccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccc
Q 039276          167 LATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT  234 (263)
Q Consensus       167 ~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (263)
                      .++..|+||            ||||||+++|+|++|+.||......  ............               .....
T Consensus       161 ~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~--~~~~~~~~~~~~---------------~~~~~  223 (264)
T cd06623         161 VGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQP--SFFELMQAICDG---------------PPPSL  223 (264)
T ss_pred             eecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccccc--CHHHHHHHHhcC---------------CCCCC
Confidence            356678888            9999999999999999998654220  111111000000               00011


Q ss_pred             hHH-HHHHHHHhhccccccCcCCCCCccCC
Q 039276          235 KEQ-CMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       235 ~~~-~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +.. +++.+.+++.+||..+|++|||+.+|
T Consensus       224 ~~~~~~~~l~~li~~~l~~~p~~R~~~~~l  253 (264)
T cd06623         224 PAEEFSPEFRDFISACLQKDPKKRPSAAEL  253 (264)
T ss_pred             CcccCCHHHHHHHHHHccCChhhCCCHHHH
Confidence            222 56779999999999999999999874

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=100.00  E-value=1.1e-32  Score=228.19  Aligned_cols=226  Identities=17%  Similarity=0.139  Sum_probs=163.4

Q ss_pred             ccccceecccCceEEEEEE-ecCCceEEEEEeecCC-CchHHHHHHHHHHHhhc-CCCcceeEeeEeecC--CeeEEEEe
Q 039276           34 FSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY-GGAFKNLDVECNMMKII-RHQNLIKIISSCSKD--DFKALILE  108 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~--~~~~lv~e  108 (263)
                      |+..+.+|+|+||.||++. ..++..+++|.+.... .........|+..++.+ +|+|++++++++.+.  +..++++|
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e   80 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE   80 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence            5667889999999999998 4568899999987642 22223345688888888 499999999999877  88999999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc---------------------ccc
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI---------------------QTL  167 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~---------------------~~~  167 (263)
                      |+++ ++.+++......+++..+..++.|++.||+|||..+++|+||+|+||+.+.                     ...
T Consensus        81 ~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~~~~kl~dfg~~~~~~~~~~~~~~~  159 (282)
T cd07831          81 LMDM-NLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKDDILKLADFGSCRGIYSKPPYTEYI  159 (282)
T ss_pred             cCCc-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcCCCeEEEecccccccccCCCcCCCC
Confidence            9975 888888765445899999999999999999999999999999999999553                     112


Q ss_pred             ccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccc----
Q 039276          168 ATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDE----  230 (263)
Q Consensus       168 g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  230 (263)
                      ++..|+||             |||||||+++||++|..||..... ...+.......... ...+ ..........    
T Consensus       160 ~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~-~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~  236 (282)
T cd07831         160 STRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNE-LDQIAKIHDVLGTP-DAEV-LKKFRKSRHMNYNF  236 (282)
T ss_pred             CCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCH-HHHHHHHHHHcCCC-CHHH-HHhhcccccccccC
Confidence            46678888             999999999999999999864211 11111111111000 0000 0000000000    


Q ss_pred             -------cccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          231 -------HFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       231 -------~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                             -......++.++.+++.+||+.+|++|||++++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~  276 (282)
T cd07831         237 PSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQA  276 (282)
T ss_pred             cccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHH
Confidence                   000123457889999999999999999999864

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=100.00  E-value=8.8e-33  Score=226.29  Aligned_cols=211  Identities=18%  Similarity=0.226  Sum_probs=166.7

Q ss_pred             cccccceecccCceEEEEEE-ecCCceEEEEEeecC--CCchHHHHHHHHHHHhhcCCCcceeEeeEeec--CCeeEEEE
Q 039276           33 LFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQ--YGGAFKNLDVECNMMKIIRHQNLIKIISSCSK--DDFKALIL  107 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~lv~  107 (263)
                      +|+..+.||.|++|.||++. ..++..+++|.+...  .....+++..|+++++.++|+|++++++.+..  ....++++
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM   80 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence            37888999999999999998 456889999998754  23345678889999999999999999997753  45689999


Q ss_pred             eccCCCCHhhhhhhC---CCcccHHHHHHHHHHHHHHHHHhc-----cCCccccccCCCcccccc---------------
Q 039276          108 ECMPHGSLGKCLSTS---NYILDFFQRLHIMIDVASAVEYLH-----FGHSTHLLLKEDQSLTQI---------------  164 (263)
Q Consensus       108 e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~lH-----~~~i~h~dlk~~nil~~~---------------  164 (263)
                      ||+++++|.+++...   ...+++..++.++.|++.||.|||     +.+++|+||+|+||+...               
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~  160 (265)
T cd08217          81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL  160 (265)
T ss_pred             hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence            999999999998753   334888999999999999999999     999999999999999543               


Q ss_pred             --------cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcc
Q 039276          165 --------QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANL  224 (263)
Q Consensus       165 --------~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (263)
                              ...++..|+||            ||||||+++++|++|+.||....  ...+.....            ...
T Consensus       161 ~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--~~~~~~~~~------------~~~  226 (265)
T cd08217         161 GHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN--QLQLASKIK------------EGK  226 (265)
T ss_pred             cCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC--HHHHHHHHh------------cCC
Confidence                    12467778998            99999999999999999986432  111111110            000


Q ss_pred             cccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          225 LSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       225 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                            ....+...+..+.+++.+|++.+|++|||+.+|
T Consensus       227 ------~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~i  259 (265)
T cd08217         227 ------FRRIPYRYSSELNEVIKSMLNVDPDKRPSTEEL  259 (265)
T ss_pred             ------CCCCccccCHHHHHHHHHHccCCcccCCCHHHH
Confidence                  001233456679999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>PHA03211 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=3.6e-33  Score=244.70  Aligned_cols=225  Identities=16%  Similarity=0.177  Sum_probs=163.7

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      ..|...+.||+|+||.||++.. ..++.|++|...      .....+|+++++.++|+||+++++++...+..++++|++
T Consensus       169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~  242 (461)
T PHA03211        169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKY  242 (461)
T ss_pred             CCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEcc
Confidence            4699999999999999999995 457889999532      233567999999999999999999999889999999999


Q ss_pred             CCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-------------------------c
Q 039276          111 PHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-------------------------Q  165 (263)
Q Consensus       111 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-------------------------~  165 (263)
                      . ++|..++......+++..+..++.|++.||+|||.++|+||||||+||++..                         .
T Consensus       243 ~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~  321 (461)
T PHA03211        243 R-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYG  321 (461)
T ss_pred             C-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccccccccc
Confidence            5 5999888765555899999999999999999999999999999999999432                         1


Q ss_pred             ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCC------CchhhhHhhhcC------CC----chh
Q 039276          166 TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHG------EMTLKHWVNDLL------PN----SVM  217 (263)
Q Consensus       166 ~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~------~~~~~~~~~~~~------~~----~~~  217 (263)
                      ..||..|+||            |||||||++|||++|..|+......      ...+...+....      +.    ...
T Consensus       322 ~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~  401 (461)
T PHA03211        322 IAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLV  401 (461)
T ss_pred             cCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHH
Confidence            2478899999            9999999999999988765432111      111111111100      00    000


Q ss_pred             hhhhhcccc--c-ccccc--cchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          218 KVVSANLLS--R-EDEHF--MTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       218 ~~~~~~~~~--~-~~~~~--~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .........  . ...+.  ......+.++.+|+.+||+.||.+|||+.|+
T Consensus       402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~el  452 (461)
T PHA03211        402 SQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAEL  452 (461)
T ss_pred             HHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHH
Confidence            000000000  0 00000  0011344578999999999999999999874

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=100.00  E-value=6.6e-33  Score=230.98  Aligned_cols=230  Identities=19%  Similarity=0.186  Sum_probs=167.1

Q ss_pred             ccccccceecccCceEEEEEEec-CCceEEEEEeecCCC--chHHHHHHHHHHHhhcCCCcceeEeeEeecC--CeeEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ-DGMEVVVKGFNLQYG--GAFKNLDVECNMMKIIRHQNLIKIISSCSKD--DFKALI  106 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~-~~~~v~vK~~~~~~~--~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~--~~~~lv  106 (263)
                      ..|+..+.||+|++|.||+|... +++.+++|.+.....  .....+.+|+.+++.++|+|++++.+++...  ...+++
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv   84 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV   84 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence            35899999999999999999954 588999999976532  2233556799999999999999999998766  789999


Q ss_pred             EeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc---------------------
Q 039276          107 LECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ---------------------  165 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~---------------------  165 (263)
                      +||+++ +|.+++......+++..+..++.|++.||+|||+.+++|+||+|+||+.+..                     
T Consensus        85 ~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~  163 (293)
T cd07843          85 MEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKPY  163 (293)
T ss_pred             ehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCcccc
Confidence            999975 9999887655558999999999999999999999999999999999985432                     


Q ss_pred             --ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCc---hhhhhh------
Q 039276          166 --TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNS---VMKVVS------  221 (263)
Q Consensus       166 --~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~------  221 (263)
                        ..++..|+||             ||||||+++++|++|+.||..... ...+...........   ......      
T Consensus       164 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (293)
T cd07843         164 TQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSE-IDQLNKIFKLLGTPTEKIWPGFSELPGAKK  242 (293)
T ss_pred             ccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCCchHHHHHhhccchhcc
Confidence              1345668888             999999999999999999864321 111111111100000   000000      


Q ss_pred             hccccc--ccccccchHH-HHHHHHHhhccccccCcCCCCCccCC
Q 039276          222 ANLLSR--EDEHFMTKEQ-CMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       222 ~~~~~~--~~~~~~~~~~-~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ......  .......+.. +++.+.+++.+||+.+|++|||+.|+
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~el  287 (293)
T cd07843         243 KTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDA  287 (293)
T ss_pred             cccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHH
Confidence            000000  0000011112 46778999999999999999999874

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=100.00  E-value=9.4e-33  Score=228.74  Aligned_cols=212  Identities=20%  Similarity=0.255  Sum_probs=160.3

Q ss_pred             cccccceecccCceEEEEEEe-cCCceEEEEEeecCCC-chHHHHHHHHHH-HhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           33 LFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYG-GAFKNLDVECNM-MKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~-~~~~~~~~e~~~-l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      +|+..+.||+|+||.||++.. .++..||+|.+..... .....+..|+.. ++..+|+|++++++++...+..++++||
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~   81 (283)
T cd06617           2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEV   81 (283)
T ss_pred             CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhh
Confidence            488889999999999999994 4689999999876532 233445556554 6667899999999999988899999999


Q ss_pred             cCCCCHhhhhhh---CCCcccHHHHHHHHHHHHHHHHHhccC-CccccccCCCccccccc--------------------
Q 039276          110 MPHGSLGKCLST---SNYILDFFQRLHIMIDVASAVEYLHFG-HSTHLLLKEDQSLTQIQ--------------------  165 (263)
Q Consensus       110 ~~~~~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~h~dlk~~nil~~~~--------------------  165 (263)
                      ++ ++|.+++..   ....+++..++.++.|++.||+|||++ +++|+||+|+||+.+..                    
T Consensus        82 ~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~  160 (283)
T cd06617          82 MD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVAK  160 (283)
T ss_pred             hc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeccccccccccccc
Confidence            97 588877754   223488999999999999999999997 99999999999985321                    


Q ss_pred             --ccccccccCc----------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccc
Q 039276          166 --TLATISYMAP----------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSR  227 (263)
Q Consensus       166 --~~g~~~y~aP----------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (263)
                        ..++..|+||                |+|||||++|+|++|+.||.........+.....            ... . 
T Consensus       161 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~------------~~~-~-  226 (283)
T cd06617         161 TIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVE------------EPS-P-  226 (283)
T ss_pred             ccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHh------------cCC-C-
Confidence              2356678888                9999999999999999998532111111111100            000 0 


Q ss_pred             ccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          228 EDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       228 ~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                         . .....+++++.+++.+||..+|++|||+++|
T Consensus       227 ---~-~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~i  258 (283)
T cd06617         227 ---Q-LPAEKFSPEFQDFVNKCLKKNYKERPNYPEL  258 (283)
T ss_pred             ---C-CCccccCHHHHHHHHHHccCChhhCcCHHHH
Confidence               0 0012356779999999999999999999864

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1e-32  Score=224.60  Aligned_cols=210  Identities=27%  Similarity=0.376  Sum_probs=170.5

Q ss_pred             cccccceecccCceEEEEEEe-cCCceEEEEEeecCCC--chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           33 LFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYG--GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~--~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      +|+..+.||+|++|.||++.. .+++.+++|.+.....  .....+.+|+++++.++|+|++++.+++.+.+..++++|+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY   80 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence            377889999999999999984 4588999999977643  4566788999999999999999999999999999999999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------c
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------T  166 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------~  166 (263)
                      +++++|.+++.... .+++..+..++.|++.+|.+||+.+++|+||+|+||+....                       .
T Consensus        81 ~~~~~L~~~~~~~~-~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~  159 (254)
T cd06627          81 AENGSLRQIIKKFG-PFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASV  159 (254)
T ss_pred             CCCCcHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCccccccc
Confidence            99999999997654 38999999999999999999999999999999999996532                       2


Q ss_pred             cccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccc
Q 039276          167 LATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT  234 (263)
Q Consensus       167 ~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (263)
                      .++..|+||            ||||||+++++|++|..||.....    .......         ..       ......
T Consensus       160 ~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~----~~~~~~~---------~~-------~~~~~~  219 (254)
T cd06627         160 VGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP----MAALFRI---------VQ-------DDHPPL  219 (254)
T ss_pred             ccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH----HHHHHHH---------hc-------cCCCCC
Confidence            356678888            999999999999999999864321    1111000         00       001112


Q ss_pred             hHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          235 KEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       235 ~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +..+++.+.+++.+||..+|++|||+.++
T Consensus       220 ~~~~~~~~~~~i~~~l~~~p~~R~~~~~~  248 (254)
T cd06627         220 PEGISPELKDFLMQCFQKDPNLRPTAKQL  248 (254)
T ss_pred             CCCCCHHHHHHHHHHHhCChhhCcCHHHH
Confidence            34556779999999999999999999764

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=100.00  E-value=3e-33  Score=237.39  Aligned_cols=229  Identities=17%  Similarity=0.171  Sum_probs=166.9

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeec----CCeeE
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSK----DDFKA  104 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~----~~~~~  104 (263)
                      ..|+..+.||+|++|.||++. ..++..|++|++....  ....+.+.+|+.+++.++|+||+++.+++..    ....+
T Consensus         5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   84 (334)
T cd07855           5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY   84 (334)
T ss_pred             hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence            568889999999999999999 5569999999987642  2345677789999999999999999988753    34689


Q ss_pred             EEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-------------------
Q 039276          105 LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-------------------  165 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-------------------  165 (263)
                      +++||+. ++|.+++..... +++..+..++.|++.||+|||.++++|+||||+||+.+..                   
T Consensus        85 lv~e~~~-~~l~~~~~~~~~-~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~  162 (334)
T cd07855          85 VVMDLME-SDLHHIIHSDQP-LTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPT  162 (334)
T ss_pred             EEEehhh-hhHHHHhccCCC-CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeecccCc
Confidence            9999996 599998876544 8999999999999999999999999999999999995432                   


Q ss_pred             --------ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhc-----------CC
Q 039276          166 --------TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDL-----------LP  213 (263)
Q Consensus       166 --------~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~-----------~~  213 (263)
                              ..++..|+||             |||||||++|||++|+.||...... ..+.......           ..
T Consensus       163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~  241 (334)
T cd07855         163 EHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYV-HQLKLILSVLGSPSEEVLNRIGS  241 (334)
T ss_pred             CCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChH-HHHHHHHHHhCCChhHhhhhhch
Confidence                    1456678888             9999999999999999999643111 1111111100           00


Q ss_pred             CchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          214 NSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .................-.......++++.+++.+||+.+|++|||++++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~  291 (334)
T cd07855         242 DRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQA  291 (334)
T ss_pred             hhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHH
Confidence            01111111000000000000113457789999999999999999998764

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=100.00  E-value=1.6e-32  Score=222.89  Aligned_cols=213  Identities=26%  Similarity=0.367  Sum_probs=170.6

Q ss_pred             cccccceecccCceEEEEEEec-CCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccC
Q 039276           33 LFSESNLISRGGFGSIYKAKIQ-DGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMP  111 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~~-~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~  111 (263)
                      +|+..+.||+|++|.||++... ++..+++|.+........+.+.+|++.++.++|++++++.+.+......++++||++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~   80 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS   80 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence            3778899999999999999954 688999999987755566788899999999999999999999988899999999999


Q ss_pred             CCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc----------------------cccc
Q 039276          112 HGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ----------------------TLAT  169 (263)
Q Consensus       112 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~----------------------~~g~  169 (263)
                      +++|.+++......+++..+..++.|++.+|++||..+++|+||+|+||+.+..                      ..++
T Consensus        81 ~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~  160 (253)
T cd05122          81 GGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMVGT  160 (253)
T ss_pred             CCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeeccccccccccccccceecC
Confidence            999999998764458999999999999999999999999999999999985422                      2356


Q ss_pred             ccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHH
Q 039276          170 ISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQ  237 (263)
Q Consensus       170 ~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (263)
                      ..|++|            ||||||+++++|++|+.||...........  ..            .    ......+....
T Consensus       161 ~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~--~~------------~----~~~~~~~~~~~  222 (253)
T cd05122         161 PYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFK--IA------------T----NGPPGLRNPEK  222 (253)
T ss_pred             CcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHH--HH------------h----cCCCCcCcccc
Confidence            678888            999999999999999999864211100000  00            0    00000011222


Q ss_pred             HHHHHHHhhccccccCcCCCCCccCC
Q 039276          238 CMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       238 ~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ++..+.+++.+||+.||++|||+.++
T Consensus       223 ~~~~~~~~i~~~l~~~p~~R~t~~~~  248 (253)
T cd05122         223 WSDEFKDFLKKCLQKNPEKRPTAEQL  248 (253)
T ss_pred             cCHHHHHHHHHHccCChhhCCCHHHH
Confidence            35669999999999999999999864

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=100.00  E-value=4.2e-33  Score=237.21  Aligned_cols=228  Identities=16%  Similarity=0.189  Sum_probs=166.1

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecC----------
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKD----------  100 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~----------  100 (263)
                      .+|...+.||.|+||.||+|.. .++..|++|.+........+.+.+|+++++.++|+|++++++.+...          
T Consensus         5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   84 (342)
T cd07854           5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS   84 (342)
T ss_pred             cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence            5699999999999999999984 56899999999877666667788999999999999999999776543          


Q ss_pred             ----CeeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------
Q 039276          101 ----DFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------  165 (263)
Q Consensus       101 ----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------  165 (263)
                          ...++++||+++ +|.+++..+  .+++..+..++.|++.||+|||+.+++|+||+|+||+....           
T Consensus        85 ~~~~~~~~lv~e~~~~-~L~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~dfg~  161 (342)
T cd07854          85 LTELNSVYIVQEYMET-DLANVLEQG--PLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDFGL  161 (342)
T ss_pred             ccccceEEEEeecccc-cHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCccc
Confidence                357899999974 898888643  37889999999999999999999999999999999986421           


Q ss_pred             ----------------ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCC--
Q 039276          166 ----------------TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPN--  214 (263)
Q Consensus       166 ----------------~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~--  214 (263)
                                      ..++..|+||             |||||||++++|++|+.||...... .............  
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~  240 (342)
T cd07854         162 ARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHEL-EQMQLILESVPVVRE  240 (342)
T ss_pred             ceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCCh
Confidence                            1245668888             9999999999999999999643211 1111111110000  


Q ss_pred             ----chhhhhhhccc-ccccccc---cchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          215 ----SVMKVVSANLL-SREDEHF---MTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       215 ----~~~~~~~~~~~-~~~~~~~---~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                          ........... .....+.   ......+.++.+++.+||+.||.+|||+++|
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~el  297 (342)
T cd07854         241 EDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEA  297 (342)
T ss_pred             HHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHH
Confidence                00000000000 0000000   0112456778999999999999999998864

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=100.00  E-value=8.7e-33  Score=232.44  Aligned_cols=164  Identities=22%  Similarity=0.310  Sum_probs=138.4

Q ss_pred             cccccceecccCceEEEEEEec---CCceEEEEEeecCC---CchHHHHHHHHHHHhhcCCCcceeEeeEeecC--CeeE
Q 039276           33 LFSESNLISRGGFGSIYKAKIQ---DGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIRHQNLIKIISSCSKD--DFKA  104 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~~---~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~--~~~~  104 (263)
                      +|+..+.||+|++|.||+|...   ++..||+|.+....   ........+|+++++.++|+|++++++++.+.  ...+
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   80 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY   80 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence            3788899999999999999953   47899999998742   34456778899999999999999999999887  7899


Q ss_pred             EEEeccCCCCHhhhhhhC----CCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc----cc----------
Q 039276          105 LILECMPHGSLGKCLSTS----NYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI----QT----------  166 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~----~~----------  166 (263)
                      +|+|++++ ++.+++...    ...+++..++.++.|++.||+|||+++++|+||+|+||+.+.    ..          
T Consensus        81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~  159 (316)
T cd07842          81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLA  159 (316)
T ss_pred             EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence            99999976 777766432    124788899999999999999999999999999999999755    21          


Q ss_pred             ----------------cccccccCc-------------chhhHHHHHHHHHhCCCCCccc
Q 039276          167 ----------------LATISYMAP-------------DTYNFGIMIMETFSGKKPTIKF  197 (263)
Q Consensus       167 ----------------~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~  197 (263)
                                      .++..|+||             |||||||++++|++|+.||...
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~  219 (316)
T cd07842         160 RLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGR  219 (316)
T ss_pred             cccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCC
Confidence                            235668999             9999999999999999999754

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=100.00  E-value=1.4e-32  Score=231.53  Aligned_cols=157  Identities=21%  Similarity=0.256  Sum_probs=129.3

Q ss_pred             cceecccCceEEEEEEec---CCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeec--CCeeEEEEeccC
Q 039276           37 SNLISRGGFGSIYKAKIQ---DGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSK--DDFKALILECMP  111 (263)
Q Consensus        37 ~~~lg~g~~g~v~~~~~~---~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~lv~e~~~  111 (263)
                      +.+||+|+||.||+|...   ++..+|+|.+....  ....+.+|+++++.++|+|++++++++..  ....++++||+.
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~   83 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE   83 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence            468999999999999854   35789999886542  23457789999999999999999998853  457899999987


Q ss_pred             CCCHhhhhhhC--------CCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-------------------
Q 039276          112 HGSLGKCLSTS--------NYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-------------------  164 (263)
Q Consensus       112 ~~~L~~~l~~~--------~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-------------------  164 (263)
                      + +|.+++...        ...+++..+..++.|++.||+|||+++++|+||||+||+...                   
T Consensus        84 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~  162 (317)
T cd07867          84 H-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLF  162 (317)
T ss_pred             C-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceecc
Confidence            5 887776421        123788889999999999999999999999999999998621                   


Q ss_pred             -----------cccccccccCc-------------chhhHHHHHHHHHhCCCCCcc
Q 039276          165 -----------QTLATISYMAP-------------DTYNFGIMIMETFSGKKPTIK  196 (263)
Q Consensus       165 -----------~~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~  196 (263)
                                 ...|++.|+||             |||||||++|||+||+.||..
T Consensus       163 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~  218 (317)
T cd07867         163 NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC  218 (317)
T ss_pred             CCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccc
Confidence                       11357779999             999999999999999999964

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=100.00  E-value=7.2e-33  Score=229.91  Aligned_cols=229  Identities=18%  Similarity=0.205  Sum_probs=166.9

Q ss_pred             cccccceecccCceEEEEEEe-cCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           33 LFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      +|+..+.||+|++|.||+|.. .+++.|++|.+....  ....+.+.+|+++++.++|+|++++++.+.+.+..++++||
T Consensus         2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~   81 (288)
T cd07833           2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY   81 (288)
T ss_pred             ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence            488899999999999999995 458899999987542  33456788999999999999999999999999999999999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc------------------------
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ------------------------  165 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~------------------------  165 (263)
                      ++++.+..+.... ..+++..++.++.|++.||+|||..+++|+|++|+||+.+..                        
T Consensus        82 ~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~  160 (288)
T cd07833          82 VERTLLELLEASP-GGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTD  160 (288)
T ss_pred             CCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCccccccC
Confidence            9986666655543 338899999999999999999999999999999999995421                        


Q ss_pred             ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhh---hcC--------CCchhhhhh
Q 039276          166 TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVN---DLL--------PNSVMKVVS  221 (263)
Q Consensus       166 ~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~---~~~--------~~~~~~~~~  221 (263)
                      ..++..|+||             ||||||+++++|++|+.||......+ .+.....   ...        .........
T Consensus       161 ~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (288)
T cd07833         161 YVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDID-QLYLIQKCLGPLPPSHQELFSSNPRFAGVA  239 (288)
T ss_pred             cccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHhhhcccCccccccc
Confidence            2345668888             99999999999999999986432111 1100000   000        000000000


Q ss_pred             -hcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          222 -ANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       222 -~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                       .............+..+++++.+++.+||..+|++|||+++|
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~i  282 (288)
T cd07833         240 FPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDEL  282 (288)
T ss_pred             cCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHH
Confidence             000000000001122347789999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=100.00  E-value=1.9e-32  Score=226.86  Aligned_cols=202  Identities=18%  Similarity=0.191  Sum_probs=153.6

Q ss_pred             eecccCceEEEEEEe-cCCceEEEEEeecCCC---chHHHHHHHHHHH---hhcCCCcceeEeeEeecCCeeEEEEeccC
Q 039276           39 LISRGGFGSIYKAKI-QDGMEVVVKGFNLQYG---GAFKNLDVECNMM---KIIRHQNLIKIISSCSKDDFKALILECMP  111 (263)
Q Consensus        39 ~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~---~~~~~~~~e~~~l---~~~~h~~i~~~~~~~~~~~~~~lv~e~~~  111 (263)
                      .||+|+||.||++.. .+++.+|+|.+.....   .......+|..++   ...+|++++.+.+.+...+..+++|||++
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN   80 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence            479999999999994 5688999999865421   1122233444333   33479999999999988889999999999


Q ss_pred             CCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc---------------------ccccc
Q 039276          112 HGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ---------------------TLATI  170 (263)
Q Consensus       112 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~---------------------~~g~~  170 (263)
                      +++|.+++..... +++..+..++.|++.||+|||+.+++|+||||+||+.+..                     ..|+.
T Consensus        81 ~~~L~~~i~~~~~-l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~  159 (279)
T cd05633          81 GGDLHYHLSQHGV-FSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTH  159 (279)
T ss_pred             CCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccCccCcCCCc
Confidence            9999998876544 8999999999999999999999999999999999985421                     14678


Q ss_pred             cccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHH
Q 039276          171 SYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQ  237 (263)
Q Consensus       171 ~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (263)
                      .|+||             |||||||++++|++|..||.........  .......          .      .....+..
T Consensus       160 ~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~--~~~~~~~----------~------~~~~~~~~  221 (279)
T cd05633         160 GYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH--EIDRMTL----------T------VNVELPDS  221 (279)
T ss_pred             CccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHH--HHHHHhh----------c------CCcCCccc
Confidence            89999             9999999999999999998643221111  0000000          0      00012345


Q ss_pred             HHHHHHHhhccccccCcCCCCC
Q 039276          238 CMSFVFNLAMECTVESPNQRIN  259 (263)
Q Consensus       238 ~~~~l~~l~~~cl~~~p~~Rpt  259 (263)
                      +++++.+++.+||+.||++||+
T Consensus       222 ~~~~~~~li~~~l~~~p~~R~~  243 (279)
T cd05633         222 FSPELKSLLEGLLQRDVSKRLG  243 (279)
T ss_pred             cCHHHHHHHHHHhcCCHHHhcC
Confidence            6677999999999999999995

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.4e-34  Score=243.85  Aligned_cols=231  Identities=21%  Similarity=0.299  Sum_probs=183.6

Q ss_pred             cccccccceecccCCcccccccccccceecccCceEEEEEE-ecCCceEEEEEeecCCCch---HHHHHHHHHHHhhcCC
Q 039276           12 IGDLTSLKSLDLSNNNFSGLFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGA---FKNLDVECNMMKIIRH   87 (263)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~~---~~~~~~e~~~l~~~~h   87 (263)
                      .+.+..+...++.+++ +....|...+.||.|+||.||.++ ..+...||||+.+......   -+.+..|+..|.+++|
T Consensus         7 ~GslKDPeiA~LF~k~-DPEklf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~H   85 (948)
T KOG0577|consen    7 PGSLKDPEIADLFFKD-DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRH   85 (948)
T ss_pred             CCCCCCchHHHHHccC-CHHHHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccC
Confidence            4555555555555444 334679999999999999999999 5567889999987664333   3446789999999999


Q ss_pred             CcceeEeeEeecCCeeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc---
Q 039276           88 QNLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI---  164 (263)
Q Consensus        88 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~---  164 (263)
                      ||++.+.|.+......++|||||-| +-.+++....+++-+..+..|..+.+.||+|||+++.||||||..|||+..   
T Consensus        86 PntieYkgCyLre~TaWLVMEYClG-SAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~  164 (948)
T KOG0577|consen   86 PNTIEYKGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGL  164 (948)
T ss_pred             CCcccccceeeccchHHHHHHHHhc-cHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCe
Confidence            9999999999888888999999965 888998888878899999999999999999999999999999999999543   


Q ss_pred             ----------------cccccccccCc---------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCC
Q 039276          165 ----------------QTLATISYMAP---------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLP  213 (263)
Q Consensus       165 ----------------~~~g~~~y~aP---------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~  213 (263)
                                      ..+||+.||||               ||||||+++.||..+++|+..+..  .+.-..+..+.+
T Consensus       165 VKLaDFGSAsi~~PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNA--MSALYHIAQNes  242 (948)
T KOG0577|consen  165 VKLADFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA--MSALYHIAQNES  242 (948)
T ss_pred             eeeccccchhhcCchhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchH--HHHHHHHHhcCC
Confidence                            45899999999               999999999999999999764311  111111111111


Q ss_pred             CchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          214 NSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ..                 ......++.+.+++..||+.-|++|||.+++
T Consensus       243 Pt-----------------Lqs~eWS~~F~~Fvd~CLqKipqeRptse~l  275 (948)
T KOG0577|consen  243 PT-----------------LQSNEWSDYFRNFVDSCLQKIPQERPTSEEL  275 (948)
T ss_pred             CC-----------------CCCchhHHHHHHHHHHHHhhCcccCCcHHHH
Confidence            11                 1245778889999999999999999998753

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=100.00  E-value=2.6e-32  Score=224.60  Aligned_cols=207  Identities=19%  Similarity=0.195  Sum_probs=158.2

Q ss_pred             ccccce--ecccCceEEEEEE-ecCCceEEEEEeecCCCchHHHHHHHHHHHhh-cCCCcceeEeeEeecCCeeEEEEec
Q 039276           34 FSESNL--ISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKI-IRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        34 y~~~~~--lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~-~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      |+..+.  +|+|+||.||++. ..++..+++|.+........     |+..... .+|+|++++++.+...+..+++|||
T Consensus        16 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~   90 (267)
T PHA03390         16 CEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDY   90 (267)
T ss_pred             hccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEc
Confidence            444444  5999999999998 45688899999876532211     2222222 2799999999999998999999999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc--------------------ccc
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT--------------------LAT  169 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~--------------------~g~  169 (263)
                      +++++|.+++.... .+++..+..++.|++.||+|||+.+++|+||+|+||+.....                    .++
T Consensus        91 ~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~  169 (267)
T PHA03390         91 IKDGDLFDLLKKEG-KLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPSCYDGT  169 (267)
T ss_pred             CCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCCccCCCC
Confidence            99999999997765 489999999999999999999999999999999999965432                    357


Q ss_pred             ccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHH
Q 039276          170 ISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQ  237 (263)
Q Consensus       170 ~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (263)
                      ..|+||            |||||||+++||++|+.||............+....                 ....+....
T Consensus       170 ~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~  232 (267)
T PHA03390        170 LDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-----------------QKKLPFIKN  232 (267)
T ss_pred             CcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-----------------cccCCcccc
Confidence            789999            999999999999999999874322222222221111                 001112335


Q ss_pred             HHHHHHHhhccccccCcCCCCC-ccCC
Q 039276          238 CMSFVFNLAMECTVESPNQRIN-AKEM  263 (263)
Q Consensus       238 ~~~~l~~l~~~cl~~~p~~Rpt-~~ev  263 (263)
                      +++.+.+++.+||+.+|.+||+ ++++
T Consensus       233 ~~~~~~~li~~~l~~~p~~R~~~~~~~  259 (267)
T PHA03390        233 VSKNANDFVQSMLKYNINYRLTNYNEI  259 (267)
T ss_pred             cCHHHHHHHHHHhccChhhCCchHHHH
Confidence            6777999999999999999996 4653

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=100.00  E-value=6.7e-33  Score=235.42  Aligned_cols=229  Identities=18%  Similarity=0.184  Sum_probs=164.5

Q ss_pred             cccccccceecccCceEEEEEE-ecCCceEEEEEeecC-CCchHHHHHHHHHHHhhcCCCcceeEeeEeecC-----Cee
Q 039276           31 LFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQ-YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKD-----DFK  103 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-----~~~  103 (263)
                      ..+|+..+.||+|++|.||+|. ..++..|++|.+... .......+.+|+.++++++|+|++++++++...     ...
T Consensus         4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   83 (336)
T cd07849           4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV   83 (336)
T ss_pred             ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence            3569999999999999999998 456899999998643 223455677899999999999999999887543     357


Q ss_pred             EEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc------------------
Q 039276          104 ALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ------------------  165 (263)
Q Consensus       104 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~------------------  165 (263)
                      ++++|++.+ ++...+...  .+++..+..++.|++.||+|||+.+++|+||||+||+.+..                  
T Consensus        84 ~lv~e~~~~-~l~~~~~~~--~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~  160 (336)
T cd07849          84 YIVQELMET-DLYKLIKTQ--HLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEH  160 (336)
T ss_pred             EEEehhccc-CHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeeccccc
Confidence            999999975 888777543  38889999999999999999999999999999999984321                  


Q ss_pred             --------ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhc---CCCchhhhhh
Q 039276          166 --------TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDL---LPNSVMKVVS  221 (263)
Q Consensus       166 --------~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~---~~~~~~~~~~  221 (263)
                              ..|+..|+||             |||||||++++|++|+.||..... ...+..+....   ..+....+.+
T Consensus       161 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  239 (336)
T cd07849         161 DHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDY-LHQLNLILGVLGTPSQEDLNCIIS  239 (336)
T ss_pred             cccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHcCCCCHHHHHHhhc
Confidence                    1356779999             999999999999999999854211 01111111101   0111111110


Q ss_pred             hcc---cc-c-cccccc---chHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          222 ANL---LS-R-EDEHFM---TKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       222 ~~~---~~-~-~~~~~~---~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ...   .. . .....+   .....++++.+++.+||+.+|++|||+.|+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~  289 (336)
T cd07849         240 LRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEA  289 (336)
T ss_pred             hhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHH
Confidence            000   00 0 000000   012346779999999999999999999864

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=100.00  E-value=1.2e-32  Score=230.69  Aligned_cols=211  Identities=22%  Similarity=0.335  Sum_probs=162.5

Q ss_pred             ccccccceecccCceEEEEEEe-cCCc----eEEEEEeecCCC-chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGM----EVVVKGFNLQYG-GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKAL  105 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~----~v~vK~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l  105 (263)
                      ..|+..+.||+|+||.||++.+ .++.    .+++|.+..... .....+.+|+.+++.++|+|++++++++... ..++
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~   85 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQL   85 (303)
T ss_pred             hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Ccee
Confidence            4588889999999999999984 3343    578888865533 2334678899999999999999999998654 4679


Q ss_pred             EEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc-------------------
Q 039276          106 ILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT-------------------  166 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~-------------------  166 (263)
                      ++|++++|+|.+++......+++..+..++.|++.||+|||+++++|+||||+||+.....                   
T Consensus        86 v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~  165 (303)
T cd05110          86 VTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKE  165 (303)
T ss_pred             eehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccccCcccc
Confidence            9999999999999987655588889999999999999999999999999999999953211                   


Q ss_pred             ------cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccc
Q 039276          167 ------LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSR  227 (263)
Q Consensus       167 ------~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (263)
                            .++..|+||            |||||||++|||++ |..||....  ......+....                
T Consensus       166 ~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~--~~~~~~~~~~~----------------  227 (303)
T cd05110         166 YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIP--TREIPDLLEKG----------------  227 (303)
T ss_pred             cccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHHCC----------------
Confidence                  124578998            99999999999997 999986421  11111111100                


Q ss_pred             ccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          228 EDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       228 ~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                        ...+.+..++..+.+++.+||..+|++||++++|
T Consensus       228 --~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l  261 (303)
T cd05110         228 --ERLPQPPICTIDVYMVMVKCWMIDADSRPKFKEL  261 (303)
T ss_pred             --CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence              0111123345568999999999999999999874

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=100.00  E-value=2.4e-32  Score=229.37  Aligned_cols=231  Identities=20%  Similarity=0.196  Sum_probs=166.0

Q ss_pred             cccccccceecccCceEEEEEEe-cCCceEEEEEeecCCC--chHHHHHHHHHHHhhcCCCcceeEeeEeecC--CeeEE
Q 039276           31 LFLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYG--GAFKNLDVECNMMKIIRHQNLIKIISSCSKD--DFKAL  105 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~--~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~--~~~~l  105 (263)
                      ...|+..+.||+|+||.||+|.. .++..||+|.+.....  .......+|++++++++|+|++++++++...  +..++
T Consensus         6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (309)
T cd07845           6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL   85 (309)
T ss_pred             ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence            35699999999999999999994 5689999999975532  2233456799999999999999999998654  46899


Q ss_pred             EEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc-------------------
Q 039276          106 ILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT-------------------  166 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~-------------------  166 (263)
                      ++||+.+ +|.+++......+++..+..++.|++.||+|||+.+++|+||+|+||+.+...                   
T Consensus        86 v~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~~  164 (309)
T cd07845          86 VMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKP  164 (309)
T ss_pred             EEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCccCC
Confidence            9999975 88888876555589999999999999999999999999999999999954321                   


Q ss_pred             ----cccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCC--chhhhhh------
Q 039276          167 ----LATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPN--SVMKVVS------  221 (263)
Q Consensus       167 ----~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~------  221 (263)
                          .++..|+||             |||||||++|||++|+.||..... ...+..........  .......      
T Consensus       165 ~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (309)
T cd07845         165 MTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSE-IEQLDLIIQLLGTPNESIWPGFSDLPLVG  243 (309)
T ss_pred             CCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHhcCCCChhhchhhhcccccc
Confidence                235568888             999999999999999999864211 11111111111000  0000000      


Q ss_pred             hccccccc--ccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          222 ANLLSRED--EHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       222 ~~~~~~~~--~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ........  .........++++.+++.+||+.||++|||++++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~i  287 (309)
T cd07845         244 KFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEA  287 (309)
T ss_pred             cccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHH
Confidence            00000000  0000112346778999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=100.00  E-value=3e-32  Score=226.79  Aligned_cols=214  Identities=20%  Similarity=0.267  Sum_probs=163.6

Q ss_pred             cccccccceecccCceEEEEEEe-cCCceEEEEEeecCCCchHHHHHHHHHHHhhc-CCCcceeEeeEeecC-----Cee
Q 039276           31 LFLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGAFKNLDVECNMMKII-RHQNLIKIISSCSKD-----DFK  103 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~-----~~~  103 (263)
                      ..+|...+.||+|+||.||++.. .+++.+++|.+.... .....+.+|+.+++.+ +|+|++++++++...     +..
T Consensus        21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~   99 (291)
T cd06639          21 TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQL   99 (291)
T ss_pred             CCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCee
Confidence            34599999999999999999994 568899999986542 2345667889999888 899999999988643     358


Q ss_pred             EEEEeccCCCCHhhhhhh---CCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc---------------
Q 039276          104 ALILECMPHGSLGKCLST---SNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ---------------  165 (263)
Q Consensus       104 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~---------------  165 (263)
                      ++++||+++++|.+++..   ....+++..++.++.|++.||+|||..+++|+||+|+||+....               
T Consensus       100 ~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~  179 (291)
T cd06639         100 WLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLT  179 (291)
T ss_pred             EEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccchhcc
Confidence            999999999999998753   23347889999999999999999999999999999999985321               


Q ss_pred             --------ccccccccCc-----------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhh
Q 039276          166 --------TLATISYMAP-----------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVV  220 (263)
Q Consensus       166 --------~~g~~~y~aP-----------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (263)
                              ..|+..|+||                 |||||||+++||++|+.||....... .+..+...          
T Consensus       180 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~-~~~~~~~~----------  248 (291)
T cd06639         180 STRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVK-TLFKIPRN----------  248 (291)
T ss_pred             cccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHH-HHHHHhcC----------
Confidence                    1345668887                 99999999999999999986421110 01100000          


Q ss_pred             hhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          221 SANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                             .......+...+.++.+++.+||+.+|++||++.||
T Consensus       249 -------~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~i  284 (291)
T cd06639         249 -------PPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHL  284 (291)
T ss_pred             -------CCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHH
Confidence                   000001123345569999999999999999999874

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=100.00  E-value=4.5e-33  Score=238.92  Aligned_cols=211  Identities=23%  Similarity=0.356  Sum_probs=179.3

Q ss_pred             ccccccceecccCceEEEEEEecC-----CceEEEEEeecC-CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQD-----GMEVVVKGFNLQ-YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKAL  105 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~-----~~~v~vK~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l  105 (263)
                      +.....+.||.|-||.||.|...+     .-.||||..+.. ...+.+.+.+|..+++.++||||++++|+|.+. ..+|
T Consensus       389 e~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~-P~Wi  467 (974)
T KOG4257|consen  389 ELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PMWI  467 (974)
T ss_pred             hhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc-ceeE
Confidence            456677899999999999998432     235889998875 455688899999999999999999999999776 5799


Q ss_pred             EEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc-------------------
Q 039276          106 ILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT-------------------  166 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~-------------------  166 (263)
                      |||.++.|-|++|++.+...++.....-+..|++.+|+|||++..|||||-.+|||..+..                   
T Consensus       468 vmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yY  547 (974)
T KOG4257|consen  468 VMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYY  547 (974)
T ss_pred             EEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhccccchh
Confidence            9999999999999999888899999999999999999999999999999999999965533                   


Q ss_pred             -----cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccc
Q 039276          167 -----LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSRE  228 (263)
Q Consensus       167 -----~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (263)
                           .-..-||||            |||-|||++||++. |..||....+.+                    ....-+.
T Consensus       548 kaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsD--------------------VI~~iEn  607 (974)
T KOG4257|consen  548 KASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSD--------------------VIGHIEN  607 (974)
T ss_pred             hccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccc--------------------eEEEecC
Confidence                 124458999            99999999999998 999997542221                    1223356


Q ss_pred             cccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          229 DEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       229 ~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +.|.|.+++|++.+..++.+||..+|.+||++.||
T Consensus       608 GeRlP~P~nCPp~LYslmskcWayeP~kRPrftei  642 (974)
T KOG4257|consen  608 GERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEI  642 (974)
T ss_pred             CCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHH
Confidence            67788899999999999999999999999998764

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=100.00  E-value=1.2e-32  Score=229.47  Aligned_cols=212  Identities=23%  Similarity=0.287  Sum_probs=166.8

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      ..|....+||+|+||.||++.. .++..+++|.+..........+.+|+.+++.++|+|++++++.+...+..+++|||+
T Consensus        20 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   99 (292)
T cd06657          20 TYLDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL   99 (292)
T ss_pred             HHhhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecC
Confidence            3466667899999999999984 568999999987655555667888999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------cc
Q 039276          111 PHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------TL  167 (263)
Q Consensus       111 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------~~  167 (263)
                      ++++|.+++...  .+++..+..++.|++.+|+|||+.+++|+||+|+||+.+..                       ..
T Consensus       100 ~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~  177 (292)
T cd06657         100 EGGALTDIVTHT--RMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLV  177 (292)
T ss_pred             CCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceecccccccccccc
Confidence            999999987543  37888899999999999999999999999999999995432                       13


Q ss_pred             ccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccch
Q 039276          168 ATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTK  235 (263)
Q Consensus       168 g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (263)
                      |+..|++|            |+||||+++++|++|..||.....  ...........+                ......
T Consensus       178 ~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~--~~~~~~~~~~~~----------------~~~~~~  239 (292)
T cd06657         178 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMKMIRDNLP----------------PKLKNL  239 (292)
T ss_pred             cCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhhCC----------------cccCCc
Confidence            56678888            999999999999999999853110  000000000000                001112


Q ss_pred             HHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          236 EQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       236 ~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ..++..+.+++.+||+.+|.+||++.+|
T Consensus       240 ~~~~~~l~~li~~~l~~~P~~R~~~~~l  267 (292)
T cd06657         240 HKVSPSLKGFLDRLLVRDPAQRATAAEL  267 (292)
T ss_pred             ccCCHHHHHHHHHHHhCCcccCcCHHHH
Confidence            3345668899999999999999998764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=100.00  E-value=2.7e-32  Score=222.43  Aligned_cols=211  Identities=23%  Similarity=0.319  Sum_probs=169.7

Q ss_pred             ccccceecccCceEEEEEEec-CCceEEEEEeecCCC--chHHHHHHHHHHHhhcCCCcceeEeeEeecC--CeeEEEEe
Q 039276           34 FSESNLISRGGFGSIYKAKIQ-DGMEVVVKGFNLQYG--GAFKNLDVECNMMKIIRHQNLIKIISSCSKD--DFKALILE  108 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~~-~~~~v~vK~~~~~~~--~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~--~~~~lv~e  108 (263)
                      |...+.||+|++|.||+|... ++..+++|.+.....  ...+.+.+|++.++.++|+|++++++.+.+.  ...++++|
T Consensus         2 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e   81 (260)
T cd06606           2 WTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLE   81 (260)
T ss_pred             ceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEE
Confidence            777899999999999999954 689999999976642  4567788999999999999999999999887  78999999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc------------------------
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI------------------------  164 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~------------------------  164 (263)
                      ++++++|.+++.... .+++..++.++.|++.+|+|||+.+++|+|++|+||+...                        
T Consensus        82 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~  160 (260)
T cd06606          82 YVSGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGT  160 (260)
T ss_pred             ecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEecccccccccc
Confidence            999999999998765 4899999999999999999999999999999999999442                        


Q ss_pred             -cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccc
Q 039276          165 -QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEH  231 (263)
Q Consensus       165 -~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (263)
                       ...++..|+||            ||||||+++++|++|..||....   ........         ...      ....
T Consensus       161 ~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~---~~~~~~~~---------~~~------~~~~  222 (260)
T cd06606         161 GSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG---NPMAALYK---------IGS------SGEP  222 (260)
T ss_pred             cCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC---chHHHHHh---------ccc------cCCC
Confidence             12356678888            99999999999999999986532   11110000         000      0001


Q ss_pred             ccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          232 FMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       232 ~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ...+...+..+.+++.+|++.+|++||++.++
T Consensus       223 ~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~l  254 (260)
T cd06606         223 PEIPEHLSEEAKDFLRKCLRRDPKKRPTADEL  254 (260)
T ss_pred             cCCCcccCHHHHHHHHHhCcCChhhCCCHHHH
Confidence            11233446779999999999999999999764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=100.00  E-value=2.1e-32  Score=223.12  Aligned_cols=211  Identities=20%  Similarity=0.257  Sum_probs=170.0

Q ss_pred             cccccceecccCceEEEEEEe-cCCceEEEEEeecCCC--chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           33 LFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYG--GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~--~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      +|+..+.||.|++|.||++.. .++..+++|.+.....  ...+.+.+|+++++.++|+|++++.+.+...+..++++|+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~   80 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY   80 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence            377889999999999999994 4688999999976633  4567788999999999999999999999988999999999


Q ss_pred             cCCCCHhhhhhhC---CCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc---------------------
Q 039276          110 MPHGSLGKCLSTS---NYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ---------------------  165 (263)
Q Consensus       110 ~~~~~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~---------------------  165 (263)
                      +++++|.+++...   ...+++..+..++.+++.||.+||+.+++|+||+|+||+.+..                     
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~  160 (258)
T cd08215          81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLA  160 (258)
T ss_pred             cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCccee
Confidence            9999999999764   2448999999999999999999999999999999999995431                     


Q ss_pred             --ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccc
Q 039276          166 --TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEH  231 (263)
Q Consensus       166 --~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (263)
                        ..|+..|+||            ||||+|+++++|++|+.||.....     ...........               .
T Consensus       161 ~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~-----~~~~~~~~~~~---------------~  220 (258)
T cd08215         161 KTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENL-----LELALKILKGQ---------------Y  220 (258)
T ss_pred             cceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcH-----HHHHHHHhcCC---------------C
Confidence              2356678888            999999999999999999864311     11111000000               0


Q ss_pred             ccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          232 FMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       232 ~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .+.+..++.++.+++.+||..+|++|||+.++
T Consensus       221 ~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l  252 (258)
T cd08215         221 PPIPSQYSSELRNLVSSLLQKDPEERPSIAQI  252 (258)
T ss_pred             CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence            01122455679999999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=100.00  E-value=1.7e-32  Score=227.32  Aligned_cols=228  Identities=20%  Similarity=0.234  Sum_probs=167.2

Q ss_pred             ccccceecccCceEEEEEEec-CCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecC--CeeEEEEe
Q 039276           34 FSESNLISRGGFGSIYKAKIQ-DGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKD--DFKALILE  108 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~~-~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~--~~~~lv~e  108 (263)
                      |+..+.||+|++|.||++... ++..+++|.+....  ......+.+|+++++.++|+|++++++++.+.  +..++++|
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e   80 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE   80 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence            567788999999999999954 58899999998763  33455677899999999999999999999887  78999999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------  165 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------  165 (263)
                      |+++ +|.+++......+++..++.++.|++.||+|||+.+++|+||+|+||+.+.+                       
T Consensus        81 ~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~  159 (287)
T cd07840          81 YMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYT  159 (287)
T ss_pred             cccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCccccc
Confidence            9975 8998887654458999999999999999999999999999999999995432                       


Q ss_pred             -ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcC---CCchhhhh----hhcc
Q 039276          166 -TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLL---PNSVMKVV----SANL  224 (263)
Q Consensus       166 -~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~---~~~~~~~~----~~~~  224 (263)
                       ..++..|+||             ||||||++++||++|+.||..... ...+........   ........    ....
T Consensus       160 ~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (287)
T cd07840         160 NRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTE-LEQLEKIFELCGSPTDENWPGVSKLPWFENL  238 (287)
T ss_pred             ccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCCchhhccccccchhhhhc
Confidence             1235668888             999999999999999999864321 111111111100   00000000    0000


Q ss_pred             cccccccc---cchHH-HHHHHHHhhccccccCcCCCCCccCC
Q 039276          225 LSREDEHF---MTKEQ-CMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       225 ~~~~~~~~---~~~~~-~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ........   ..... +++++.+++.+||+.+|++||+++++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~  281 (287)
T cd07840         239 KPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQA  281 (287)
T ss_pred             cccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence            00000000   00111 36779999999999999999999764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=100.00  E-value=2.8e-32  Score=224.36  Aligned_cols=211  Identities=18%  Similarity=0.317  Sum_probs=161.0

Q ss_pred             ccccceecccCceEEEEEEecC--CceEEEEEeecCC----------CchHHHHHHHHHHHhh-cCCCcceeEeeEeecC
Q 039276           34 FSESNLISRGGFGSIYKAKIQD--GMEVVVKGFNLQY----------GGAFKNLDVECNMMKI-IRHQNLIKIISSCSKD  100 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~~~--~~~v~vK~~~~~~----------~~~~~~~~~e~~~l~~-~~h~~i~~~~~~~~~~  100 (263)
                      |+..+.||+|+||.||++....  +..+++|.+....          ......+..|+.++.+ ++|+|++++++++.+.
T Consensus         2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~   81 (269)
T cd08528           2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEN   81 (269)
T ss_pred             chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccC
Confidence            7788999999999999999543  6889999886431          1223446678887765 6999999999999999


Q ss_pred             CeeEEEEeccCCCCHhhhhhh---CCCcccHHHHHHHHHHHHHHHHHhcc-CCccccccCCCccccccc-----------
Q 039276          101 DFKALILECMPHGSLGKCLST---SNYILDFFQRLHIMIDVASAVEYLHF-GHSTHLLLKEDQSLTQIQ-----------  165 (263)
Q Consensus       101 ~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lH~-~~i~h~dlk~~nil~~~~-----------  165 (263)
                      +..++++||+++++|.+++..   ....++...++.++.|++.||.|||+ ++++|+||+|+||+....           
T Consensus        82 ~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~~  161 (269)
T cd08528          82 DRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGLA  161 (269)
T ss_pred             CeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccce
Confidence            999999999999999988743   23348888999999999999999996 789999999999985332           


Q ss_pred             -----------ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhh
Q 039276          166 -----------TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSA  222 (263)
Q Consensus       166 -----------~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (263)
                                 ..|+..|++|            ||||||+++|+|++|+.||......  ..   ..        .+...
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~--~~---~~--------~~~~~  228 (269)
T cd08528         162 KQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNML--SL---AT--------KIVEA  228 (269)
T ss_pred             eecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHH--HH---HH--------HHhhc
Confidence                       2467779998            9999999999999999998532110  00   00        00000


Q ss_pred             cccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          223 NLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ...+      .....+++++.+++.+||+.||++||++.||
T Consensus       229 ~~~~------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~  263 (269)
T cd08528         229 VYEP------LPEGMYSEDVTDVITSCLTPDAEARPDIIQV  263 (269)
T ss_pred             cCCc------CCcccCCHHHHHHHHHHCCCCCccCCCHHHH
Confidence            0000      0112345679999999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=100.00  E-value=3.9e-32  Score=227.79  Aligned_cols=231  Identities=18%  Similarity=0.263  Sum_probs=163.8

Q ss_pred             ccccccccceecccCceEEEEEEe-cCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecCC-----
Q 039276           30 GLFLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDD-----  101 (263)
Q Consensus        30 ~~~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-----  101 (263)
                      ..++|+..+.||+|+||.||++.. .+++.||+|.+....  ........+|+++++.++|+|++++++++...+     
T Consensus        10 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   89 (310)
T cd07865          10 EVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNR   89 (310)
T ss_pred             hhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccC
Confidence            345699999999999999999994 468999999986542  223345567999999999999999999886543     


Q ss_pred             ---eeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-------------
Q 039276          102 ---FKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-------------  165 (263)
Q Consensus       102 ---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-------------  165 (263)
                         ..++++||+.+ +|.+++......+++..++.++.|++.||+|||+++++|+||+|+||+.+..             
T Consensus        90 ~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~  168 (310)
T cd07865          90 YKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLARA  168 (310)
T ss_pred             CCceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCccc
Confidence               45999999965 8888887655458999999999999999999999999999999999985421             


Q ss_pred             --------------ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchh---hhHhhhcCCCc
Q 039276          166 --------------TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTL---KHWVNDLLPNS  215 (263)
Q Consensus       166 --------------~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~---~~~~~~~~~~~  215 (263)
                                    ..++..|+||             ||||||++++||++|+.||..... ....   ..... ..+..
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~-~~~~~~~~~~~~-~~~~~  246 (310)
T cd07865         169 FSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTE-QHQLTLISQLCG-SITPE  246 (310)
T ss_pred             ccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhC-CCChh
Confidence                          1245668999             999999999999999999864211 1110   00000 00000


Q ss_pred             hh------hhhhhcccccccc----cccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          216 VM------KVVSANLLSREDE----HFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       216 ~~------~~~~~~~~~~~~~----~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ..      .............    ........+..+.+++.+||..||++|||++|+
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~  304 (310)
T cd07865         247 VWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTA  304 (310)
T ss_pred             hcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHH
Confidence            00      0000000000000    000011124557899999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=100.00  E-value=4.1e-32  Score=223.47  Aligned_cols=209  Identities=19%  Similarity=0.295  Sum_probs=152.9

Q ss_pred             eecccCceEEEEEEecCC---ceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccCCCC
Q 039276           39 LISRGGFGSIYKAKIQDG---MEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGS  114 (263)
Q Consensus        39 ~lg~g~~g~v~~~~~~~~---~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~  114 (263)
                      .||+|+||.||++...++   ..+++|.+.... ....+.+.+|+.+++.++|||++++++.+.+....+++|||+++++
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~   81 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD   81 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence            589999999999974332   345677765443 2345678899999999999999999999998889999999999999


Q ss_pred             HhhhhhhCC---CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-------------------------c
Q 039276          115 LGKCLSTSN---YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-------------------------T  166 (263)
Q Consensus       115 L~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-------------------------~  166 (263)
                      |.+++....   ...+...+..++.|++.||+|||+.+++|+||||+||+.+..                         .
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~  161 (268)
T cd05086          82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDK  161 (268)
T ss_pred             HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchhhhcccCC
Confidence            999997532   225666778899999999999999999999999999985321                         1


Q ss_pred             cccccccCc-------------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccc
Q 039276          167 LATISYMAP-------------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLS  226 (263)
Q Consensus       167 ~g~~~y~aP-------------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (263)
                      .++..|+||                   |||||||++|||++ +..||..... ...+......    ......+     
T Consensus       162 ~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~-~~~~~~~~~~----~~~~~~~-----  231 (268)
T cd05086         162 CVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD-REVLNHVIKD----QQVKLFK-----  231 (268)
T ss_pred             cCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHHhh----cccccCC-----
Confidence            244567777                   99999999999997 5778753211 1111111110    0000000     


Q ss_pred             cccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          227 REDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       227 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                           .......++.+.+++..|| .+|++|||+++|
T Consensus       232 -----~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i  262 (268)
T cd05086         232 -----PQLELPYSERWYEVLQFCW-LSPEKRATAEEV  262 (268)
T ss_pred             -----CccCCCCcHHHHHHHHHHh-hCcccCCCHHHH
Confidence                 1112234566888999999 689999999875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=100.00  E-value=3.4e-32  Score=228.44  Aligned_cols=212  Identities=21%  Similarity=0.294  Sum_probs=165.5

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecC---CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQ---YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      ..|...+.||+|++|.||+|.. .++..+++|.+...   .......+.+|+++++.++|+|++++.+++......++++
T Consensus        15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   94 (308)
T cd06634          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM   94 (308)
T ss_pred             HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence            4588889999999999999994 45888999998643   2233456778999999999999999999999888999999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-------------------ccc
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-------------------TLA  168 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-------------------~~g  168 (263)
                      ||+. +++.+++......++...+..++.|++.|+.|||+.+++|+||+|+||+....                   ..+
T Consensus        95 e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~  173 (308)
T cd06634          95 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVG  173 (308)
T ss_pred             EccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecCcccccC
Confidence            9997 58887776555558889999999999999999999999999999999996432                   135


Q ss_pred             cccccCc---------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccccc
Q 039276          169 TISYMAP---------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFM  233 (263)
Q Consensus       169 ~~~y~aP---------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (263)
                      +..|+||               |||||||++++|++|..||......+ ....+..            . ..     ...
T Consensus       174 ~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~~------------~-~~-----~~~  234 (308)
T cd06634         174 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQ------------N-ES-----PAL  234 (308)
T ss_pred             CccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHH-HHHHHhh------------c-CC-----CCc
Confidence            6778888               99999999999999999975421110 0000000            0 00     001


Q ss_pred             chHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          234 TKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       234 ~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ....++..+.+++.+||+.+|++||++++|
T Consensus       235 ~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l  264 (308)
T cd06634         235 QSGHWSEYFRNFVDSCLQKIPQDRPTSEVL  264 (308)
T ss_pred             CcccccHHHHHHHHHHhhCCcccCCCHHHH
Confidence            123456679999999999999999998764

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.8e-32  Score=221.88  Aligned_cols=206  Identities=23%  Similarity=0.257  Sum_probs=155.9

Q ss_pred             ceecccCceEEEEEEe-cCCceEEEEEeecCCC---chHHHHHHHHHH-HhhcCCCcceeEeeEeecCCeeEEEEeccCC
Q 039276           38 NLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYG---GAFKNLDVECNM-MKIIRHQNLIKIISSCSKDDFKALILECMPH  112 (263)
Q Consensus        38 ~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~---~~~~~~~~e~~~-l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~  112 (263)
                      +.||+|++|.||+|.. .+++.||+|.+.....   ........|... ....+|+|++++++.+.+.+..++++||+++
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            4689999999999984 5688999999865421   112233344443 4455899999999999998999999999999


Q ss_pred             CCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-------------------cccccccc
Q 039276          113 GSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-------------------TLATISYM  173 (263)
Q Consensus       113 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-------------------~~g~~~y~  173 (263)
                      ++|.+++..... +++..+..++.|++.||.|||+.+++|+||+|+||+....                   ..++..|+
T Consensus        82 ~~L~~~l~~~~~-~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~y~  160 (260)
T cd05611          82 GDCASLIKTLGG-LPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVGTPDYL  160 (260)
T ss_pred             CCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccccccCCCCcCcc
Confidence            999999976543 7889999999999999999999999999999999985432                   24677899


Q ss_pred             Cc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHHHHHH
Q 039276          174 AP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSF  241 (263)
Q Consensus       174 aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (263)
                      ||            ||||||+++++|++|..||...... ..+.....            ...    .........++++
T Consensus       161 ~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~------------~~~----~~~~~~~~~~~~~  223 (260)
T cd05611         161 APETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPD-AVFDNILS------------RRI----NWPEEVKEFCSPE  223 (260)
T ss_pred             ChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHh------------ccc----CCCCcccccCCHH
Confidence            98            9999999999999999998632111 11111100            000    0000112346677


Q ss_pred             HHHhhccccccCcCCCCCcc
Q 039276          242 VFNLAMECTVESPNQRINAK  261 (263)
Q Consensus       242 l~~l~~~cl~~~p~~Rpt~~  261 (263)
                      +.+++.+||+.+|++||++.
T Consensus       224 ~~~~i~~~l~~~p~~R~~~~  243 (260)
T cd05611         224 AVDLINRLLCMDPAKRLGAN  243 (260)
T ss_pred             HHHHHHHHccCCHHHccCCC
Confidence            99999999999999999875

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=1.7e-32  Score=233.10  Aligned_cols=229  Identities=18%  Similarity=0.177  Sum_probs=166.4

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecC--CCchHHHHHHHHHHHhhcCCCcceeEeeEeecC-----Cee
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQ--YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKD-----DFK  103 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-----~~~  103 (263)
                      .+|...+.||+|+||.||++. ..++..|++|.+...  .......+.+|+.+++.++|+|++++++++...     ...
T Consensus         5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~   84 (337)
T cd07858           5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDV   84 (337)
T ss_pred             cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcE
Confidence            358889999999999999998 456899999998754  233456677899999999999999999987543     357


Q ss_pred             EEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc------------------
Q 039276          104 ALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ------------------  165 (263)
Q Consensus       104 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~------------------  165 (263)
                      ++++||+. ++|.+++..... +++..+..++.|++.||.|||+++++|+||+|+||+.+..                  
T Consensus        85 ~lv~e~~~-~~L~~~~~~~~~-l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~  162 (337)
T cd07858          85 YIVYELMD-TDLHQIIRSSQT-LSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKG  162 (337)
T ss_pred             EEEEeCCC-CCHHHHHhcCCC-CCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCCCc
Confidence            99999996 589988876544 8999999999999999999999999999999999985421                  


Q ss_pred             -----ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcC-----------CCch
Q 039276          166 -----TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLL-----------PNSV  216 (263)
Q Consensus       166 -----~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~-----------~~~~  216 (263)
                           ..++..|+||             |||||||++++|++|+.||..... ...+........           ....
T Consensus       163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (337)
T cd07858         163 DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDY-VHQLKLITELLGSPSEEDLGFIRNEKA  241 (337)
T ss_pred             ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCCh-HHHHHHHHHHhCCCChHHhhhcCchhh
Confidence                 1356678888             999999999999999999864211 111111110000           0000


Q ss_pred             hhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          217 MKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ...+.................+++++.+++.+||+.+|++|||++++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~el  288 (337)
T cd07858         242 RRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEA  288 (337)
T ss_pred             hHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHH
Confidence            00000000000000001123567789999999999999999999864

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=100.00  E-value=6.4e-32  Score=223.32  Aligned_cols=206  Identities=16%  Similarity=0.192  Sum_probs=160.0

Q ss_pred             ecccCceEEEEEE-ecCCceEEEEEeecCC---CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccCCCCH
Q 039276           40 ISRGGFGSIYKAK-IQDGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSL  115 (263)
Q Consensus        40 lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L  115 (263)
                      ||+|+||+||++. ..+++.+++|.+....   ......+..|+++++.++|+|++++.+.+...+..|+++||+++++|
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL   80 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence            6899999999998 4468899999987542   22344556899999999999999999999988899999999999999


Q ss_pred             hhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc----------------------ccccccc
Q 039276          116 GKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ----------------------TLATISY  172 (263)
Q Consensus       116 ~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~----------------------~~g~~~y  172 (263)
                      .+++.... ..+++..+..++.|++.||.|||..+++|+||+|+||+....                      ..++..|
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~y  160 (277)
T cd05577          81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPGY  160 (277)
T ss_pred             HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCCccccccCCCCc
Confidence            99987644 248899999999999999999999999999999999996432                      1345678


Q ss_pred             cCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHHHHH
Q 039276          173 MAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMS  240 (263)
Q Consensus       173 ~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (263)
                      +||            |||||||++++|++|+.||........ ......            ... .   .....+...++
T Consensus       161 ~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~------------~~~-~---~~~~~~~~~~~  223 (277)
T cd05577         161 MAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVE-KEELKR------------RTL-E---MAVEYPDKFSP  223 (277)
T ss_pred             CCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCccccc-HHHHHh------------ccc-c---ccccCCccCCH
Confidence            888            999999999999999999864322110 000000            000 0   00112334566


Q ss_pred             HHHHhhccccccCcCCCCCccC
Q 039276          241 FVFNLAMECTVESPNQRINAKE  262 (263)
Q Consensus       241 ~l~~l~~~cl~~~p~~Rpt~~e  262 (263)
                      .+.+++.+||+.+|++||++.+
T Consensus       224 ~~~~li~~~l~~~p~~R~~~~~  245 (277)
T cd05577         224 EAKDLCEALLQKDPEKRLGCRG  245 (277)
T ss_pred             HHHHHHHHHccCChhHccCCCc
Confidence            7999999999999999996554

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=2.6e-33  Score=240.65  Aligned_cols=210  Identities=23%  Similarity=0.359  Sum_probs=168.2

Q ss_pred             ccccceecccCceEEEEEEec-CCceEEEEEeecC----CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCC--eeEEE
Q 039276           34 FSESNLISRGGFGSIYKAKIQ-DGMEVVVKGFNLQ----YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDD--FKALI  106 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~~-~~~~v~vK~~~~~----~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--~~~lv  106 (263)
                      ......||+|+|-+||+|... +|..||.-.++..    .....+++-.|+++|+.|+|+||+++++++.+..  ...+|
T Consensus        42 ~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~i  121 (632)
T KOG0584|consen   42 LKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFI  121 (632)
T ss_pred             eehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeee
Confidence            345678999999999999854 5777775444322    3456788999999999999999999999997653  47899


Q ss_pred             EeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccC--CccccccCCCcccccc--------------------
Q 039276          107 LECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFG--HSTHLLLKEDQSLTQI--------------------  164 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~i~h~dlk~~nil~~~--------------------  164 (263)
                      +|.+..|+|+.|+++.++ .+...++.|+.||++||.|||++  .|+|||||-+||+++.                    
T Consensus       122 TEL~TSGtLr~Y~kk~~~-vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~  200 (632)
T KOG0584|consen  122 TELFTSGTLREYRKKHRR-VNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSH  200 (632)
T ss_pred             eecccCCcHHHHHHHhcc-CCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhccc
Confidence            999999999999998776 78889999999999999999988  5999999999999543                    


Q ss_pred             --cccccccccCc-----------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccc
Q 039276          165 --QTLATISYMAP-----------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEH  231 (263)
Q Consensus       165 --~~~g~~~y~aP-----------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (263)
                        ...|||.||||           ||||||+++.||+|+..||..=.+....+.+......+..+.++-           
T Consensus       201 aksvIGTPEFMAPEmYEE~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~-----------  269 (632)
T KOG0584|consen  201 AKSVIGTPEFMAPEMYEENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVK-----------  269 (632)
T ss_pred             cceeccCccccChHHHhhhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccC-----------
Confidence              24799999999           999999999999999999875333333333333333333332222           


Q ss_pred             ccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          232 FMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       232 ~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                             .++++++|.+||.. .++|||+.|+
T Consensus       270 -------dPevr~fIekCl~~-~~~R~sa~eL  293 (632)
T KOG0584|consen  270 -------DPEVREFIEKCLAT-KSERLSAKEL  293 (632)
T ss_pred             -------CHHHHHHHHHHhcC-chhccCHHHH
Confidence                   33589999999999 9999999874

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=100.00  E-value=2.5e-32  Score=227.53  Aligned_cols=229  Identities=18%  Similarity=0.188  Sum_probs=163.1

Q ss_pred             cccccceecccCceEEEEEEe-cCCceEEEEEeecCC--CchHHHHHHHHHHHhhcC-CCcceeEeeEeecCCe-----e
Q 039276           33 LFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIR-HQNLIKIISSCSKDDF-----K  103 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~-----~  103 (263)
                      .|+..+.||+|+||.||+|.. .++..|++|.+....  ......+.+|+.+++.+. |+|++++++.+.....     .
T Consensus         2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~   81 (295)
T cd07837           2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSL   81 (295)
T ss_pred             CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceE
Confidence            488899999999999999994 568999999986542  223456788999999995 6999999998876554     7


Q ss_pred             EEEEeccCCCCHhhhhhhCC----CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-cc------------
Q 039276          104 ALILECMPHGSLGKCLSTSN----YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-QT------------  166 (263)
Q Consensus       104 ~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-~~------------  166 (263)
                      |+++||+++ +|.+++....    ..+++..+..++.|++.||+|||+++++|+||+|+||+.+. ..            
T Consensus        82 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~  160 (295)
T cd07837          82 YLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRA  160 (295)
T ss_pred             EEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeeccccee
Confidence            999999986 8888876432    23789999999999999999999999999999999999664 21            


Q ss_pred             -----------cccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchh---hh
Q 039276          167 -----------LATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVM---KV  219 (263)
Q Consensus       167 -----------~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~---~~  219 (263)
                                 .+++.|+||             ||||||+++|+|++|..||....... .+.............   ..
T Consensus       161 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  239 (295)
T cd07837         161 FSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQ-QLLHIFKLLGTPTEQVWPGV  239 (295)
T ss_pred             cCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHHHhCCCChhhCcch
Confidence                       235568888             99999999999999999986421111 011111100000000   00


Q ss_pred             hhhcc---cc--cccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          220 VSANL---LS--REDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       220 ~~~~~---~~--~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .....   ..  ...........+++++.+++.+||..||++|||++|+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~ei  288 (295)
T cd07837         240 SKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAA  288 (295)
T ss_pred             hhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHH
Confidence            00000   00  0000000113467779999999999999999998764

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=100.00  E-value=3.9e-34  Score=250.50  Aligned_cols=211  Identities=21%  Similarity=0.368  Sum_probs=179.7

Q ss_pred             cccccceecccCceEEEEEEec-C---CceEEEEEeecC-CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           33 LFSESNLISRGGFGSIYKAKIQ-D---GMEVVVKGFNLQ-YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~~-~---~~~v~vK~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      .....+.||.|.||.|+.|+.+ .   ...||||.++.. ..+.+..|..|+.++-+++||||+.+.|+...+...+||+
T Consensus       630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiT  709 (996)
T KOG0196|consen  630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIIT  709 (996)
T ss_pred             heEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEh
Confidence            4667889999999999999943 2   456999999876 3445667899999999999999999999999999999999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccccc-------------------
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQTLA-------------------  168 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~~g-------------------  168 (263)
                      |||++|+|..|++.+.+++...++..++.+|+.|++||-+.++|||||-.+|||.+++-++                   
T Consensus       710 EyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~y  789 (996)
T KOG0196|consen  710 EYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAY  789 (996)
T ss_pred             hhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceeecccCCCccc
Confidence            9999999999999988889999999999999999999999999999999999996654322                   


Q ss_pred             -------cccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccc
Q 039276          169 -------TISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSRE  228 (263)
Q Consensus       169 -------~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (263)
                             ...|.||            ||||||+++||.++ |..||=+..+.              .+.+      .-+.
T Consensus       790 tt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQ--------------dVIk------aIe~  849 (996)
T KOG0196|consen  790 TTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ--------------DVIK------AIEQ  849 (996)
T ss_pred             cccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchH--------------HHHH------HHHh
Confidence                   3558899            99999999999988 99997533111              1122      2245


Q ss_pred             cccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          229 DEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       229 ~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +.|.|.+.+|+..+.+||+.||+.|-.+||++.+|
T Consensus       850 gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qi  884 (996)
T KOG0196|consen  850 GYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQI  884 (996)
T ss_pred             ccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHH
Confidence            56667789999999999999999999999999875

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.5e-32  Score=235.60  Aligned_cols=212  Identities=22%  Similarity=0.270  Sum_probs=173.3

Q ss_pred             ccccccccceecccCceEEEEEE-ecCCceEEEEEeecCCC--chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEE
Q 039276           30 GLFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYG--GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALI  106 (263)
Q Consensus        30 ~~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~--~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv  106 (263)
                      ....|.....||.|.|+.|.+++ ..++..||+|.+.+...  ..+..+-+|+.+++.++||||++++++......+|+|
T Consensus        54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV  133 (596)
T KOG0586|consen   54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLV  133 (596)
T ss_pred             cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEE
Confidence            34569999999999999999999 55699999999977643  3345578899999999999999999999999999999


Q ss_pred             EeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc----------------------
Q 039276          107 LECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI----------------------  164 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~----------------------  164 (263)
                      |||+.+|.+.+++...++ ..+..+..++.|++.+++|||.++++|||||++|++++.                      
T Consensus       134 ~eya~~ge~~~yl~~~gr-~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~lq  212 (596)
T KOG0586|consen  134 MEYASGGELFDYLVKHGR-MKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYGLMLQ  212 (596)
T ss_pred             EEeccCchhHHHHHhccc-chhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeeccccccc
Confidence            999999999999998877 555888889999999999999999999999999999543                      


Q ss_pred             cccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccc
Q 039276          165 QTLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEH  231 (263)
Q Consensus       165 ~~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (263)
                      +..|++.|.||             |+||+|+++|-|+.|..||+...                  .+.......   .+.
T Consensus       213 t~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~------------------lk~Lr~rvl---~gk  271 (596)
T KOG0586|consen  213 TFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQN------------------LKELRPRVL---RGK  271 (596)
T ss_pred             ccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcc------------------cccccchhe---eee
Confidence            33689999999             99999999999999999997420                  000000000   011


Q ss_pred             ccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          232 FMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       232 ~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +..+--++.+..++++++|..+|.+|+++++|
T Consensus       272 ~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqi  303 (596)
T KOG0586|consen  272 YRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQI  303 (596)
T ss_pred             ecccceeechhHHHHHHhhccCccccCCHHHh
Confidence            11223334457899999999999999998875

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=100.00  E-value=4.6e-32  Score=225.98  Aligned_cols=230  Identities=17%  Similarity=0.187  Sum_probs=164.8

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCCC--chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEe
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYG--GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~--~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      ++|+..+.||+|++|.||+|.. .+++.|++|.+.....  .....+.+|+++++.++|+|++++++++.+....++++|
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   81 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE   81 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence            3588899999999999999995 4688999999865422  234567789999999999999999999999999999999


Q ss_pred             ccCCCCHhhhhhhCCC-cccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc----------------------
Q 039276          109 CMPHGSLGKCLSTSNY-ILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ----------------------  165 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~----------------------  165 (263)
                      |+++ +|.+++..... ..++..+..++.|++.||+|||+++++|+||+|+||+.+..                      
T Consensus        82 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~~  160 (294)
T PLN00009         82 YLDL-DLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTF  160 (294)
T ss_pred             cccc-cHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCcccc
Confidence            9965 88877754332 25778888999999999999999999999999999996421                      


Q ss_pred             --ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCC--chh----hhhhhcc
Q 039276          166 --TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPN--SVM----KVVSANL  224 (263)
Q Consensus       166 --~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~  224 (263)
                        ..++..|+||             |||||||++++|++|+.||......+ .+.+........  ...    ...+...
T Consensus       161 ~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (294)
T PLN00009        161 THEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEID-ELFKIFRILGTPNEETWPGVTSLPDYKS  239 (294)
T ss_pred             ccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCChhhccccccchhhhh
Confidence              1235668888             99999999999999999986432111 111111100000  000    0000000


Q ss_pred             -ccc--ccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          225 -LSR--EDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       225 -~~~--~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                       ...  ...........++++.+++.+|++.+|++||++.++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~  281 (294)
T PLN00009        240 AFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAA  281 (294)
T ss_pred             hcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHH
Confidence             000  000000112456678999999999999999998764

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=100.00  E-value=6.2e-32  Score=227.36  Aligned_cols=212  Identities=20%  Similarity=0.261  Sum_probs=165.0

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCCC---chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYG---GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~---~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      +.|...+.||+|+||.||+|.. .++..+++|.+.....   .....+.+|+++++.++|+|++++.+.+.+....++++
T Consensus        21 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  100 (313)
T cd06633          21 EIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVM  100 (313)
T ss_pred             HHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEE
Confidence            4577788899999999999984 4688999999875422   23456778999999999999999999999999999999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-------------------ccc
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-------------------TLA  168 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-------------------~~g  168 (263)
                      ||+.+ ++.+++......+++..+..++.|++.+++|||+.+++|+||+|+||+....                   ..|
T Consensus       101 e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~~~~~  179 (313)
T cd06633         101 EYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSFVG  179 (313)
T ss_pred             ecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccCCCCCccc
Confidence            99965 8888776655558899999999999999999999999999999999995432                   245


Q ss_pred             cccccCc---------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccccc
Q 039276          169 TISYMAP---------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFM  233 (263)
Q Consensus       169 ~~~y~aP---------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (263)
                      +..|+||               |||||||++++|++|..||........ .......            .. .     ..
T Consensus       180 ~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~-~~~~~~~------------~~-~-----~~  240 (313)
T cd06633         180 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-LYHIAQN------------DS-P-----TL  240 (313)
T ss_pred             cccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHhc------------CC-C-----CC
Confidence            6678888               999999999999999999764211100 0000000            00 0     00


Q ss_pred             chHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          234 TKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       234 ~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ....++..+.+++.+||+.+|.+||++.++
T Consensus       241 ~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~  270 (313)
T cd06633         241 QSNEWTDSFRGFVDYCLQKIPQERPASAEL  270 (313)
T ss_pred             CccccCHHHHHHHHHHccCChhhCcCHHHH
Confidence            112344568999999999999999999764

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=100.00  E-value=6.1e-32  Score=221.51  Aligned_cols=202  Identities=19%  Similarity=0.257  Sum_probs=160.7

Q ss_pred             ecccCceEEEEEEe-cCCceEEEEEeecCC---CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccCCCCH
Q 039276           40 ISRGGFGSIYKAKI-QDGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSL  115 (263)
Q Consensus        40 lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L  115 (263)
                      ||.|++|.||++.. .+++.+++|++....   ....+.+.+|+++++.++|+|++++++.+.+....++++||+++++|
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL   80 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence            68999999999994 458899999997542   23456788999999999999999999999999999999999999999


Q ss_pred             hhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc----------------------cccccccc
Q 039276          116 GKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ----------------------TLATISYM  173 (263)
Q Consensus       116 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~----------------------~~g~~~y~  173 (263)
                      .+++..... ++...+..++.|++.||+|||+.+++|+||+|+||+.+..                      ..++..|+
T Consensus        81 ~~~l~~~~~-l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~  159 (262)
T cd05572          81 WTILRDRGL-FDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGTPEYV  159 (262)
T ss_pred             HHHHhhcCC-CCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccccccCCcCcc
Confidence            999976543 7889999999999999999999999999999999985432                      23567799


Q ss_pred             Cc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHHHHHH
Q 039276          174 AP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSF  241 (263)
Q Consensus       174 aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (263)
                      +|            |+||||+++|+|++|..||.......  .. .            ......  .......+..++++
T Consensus       160 ~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~-~------------~~~~~~--~~~~~~~~~~~~~~  222 (262)
T cd05572         160 APEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP--ME-I------------YNDILK--GNGKLEFPNYIDKA  222 (262)
T ss_pred             ChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH--HH-H------------HHHHhc--cCCCCCCCcccCHH
Confidence            98            99999999999999999986532211  00 0            000000  00111123334677


Q ss_pred             HHHhhccccccCcCCCCC
Q 039276          242 VFNLAMECTVESPNQRIN  259 (263)
Q Consensus       242 l~~l~~~cl~~~p~~Rpt  259 (263)
                      +.+++.+||+.+|++||+
T Consensus       223 ~~~~i~~~l~~~p~~R~~  240 (262)
T cd05572         223 AKDLIKQLLRRNPEERLG  240 (262)
T ss_pred             HHHHHHHHccCChhhCcC
Confidence            999999999999999999

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.98  E-value=5.5e-33  Score=219.88  Aligned_cols=222  Identities=18%  Similarity=0.202  Sum_probs=171.1

Q ss_pred             cCCccccccccccc-ceecccCceEEEEEE-ecCCceEEEEEeecCCCchHHHHHHHHHHHhhc-CCCcceeEeeEeecC
Q 039276           24 SNNNFSGLFLFSES-NLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKII-RHQNLIKIISSCSKD  100 (263)
Q Consensus        24 ~~~~~~~~~~y~~~-~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~  100 (263)
                      .....+.+++|... .+||-|-.|+|-.+. ..++.++|+|++...     ....+|++++-+. .|+|||.+++++.+.
T Consensus        53 ~~k~~~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs  127 (400)
T KOG0604|consen   53 DFKEYSITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENS  127 (400)
T ss_pred             chhcccchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhh
Confidence            33555566777744 589999999999998 667999999988644     4556788888777 699999999998653


Q ss_pred             ----CeeEEEEeccCCCCHhhhhhhCCCc-ccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-----------
Q 039276          101 ----DFKALILECMPHGSLGKCLSTSNYI-LDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-----------  164 (263)
Q Consensus       101 ----~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-----------  164 (263)
                          .-+.+|||.++||.|.+.++..+.. +++.++..|+.||..|+.|||+.+|.||||||+|+|-.+           
T Consensus       128 ~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtD  207 (400)
T KOG0604|consen  128 YQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTD  207 (400)
T ss_pred             ccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecc
Confidence                3467999999999999999876543 899999999999999999999999999999999999332           


Q ss_pred             --------------cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhh
Q 039276          165 --------------QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMK  218 (263)
Q Consensus       165 --------------~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~  218 (263)
                                    +...|+.|.||            |+||+||++|-|++|.+||........         .+.-...
T Consensus       208 fGFAK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~ai---------spgMk~r  278 (400)
T KOG0604|consen  208 FGFAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI---------SPGMKRR  278 (400)
T ss_pred             cccccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccC---------ChhHHhH
Confidence                          22458889999            999999999999999999975321110         0111111


Q ss_pred             hhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          219 VVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +.....    .-..+....+++...++|+++|..+|.+|.|+.++
T Consensus       279 I~~gqy----~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~  319 (400)
T KOG0604|consen  279 IRTGQY----EFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEV  319 (400)
T ss_pred             hhccCc----cCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHh
Confidence            111111    01112347899999999999999999999999874

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.98  E-value=4.8e-32  Score=221.04  Aligned_cols=211  Identities=20%  Similarity=0.251  Sum_probs=168.2

Q ss_pred             cccccceecccCceEEEEEE-ecCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           33 LFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      +|+..+.+|.|++|.||++. ..++..+++|.+....  ......+..|+++++.++|+|++++.+.+.+....++++||
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY   80 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence            37788999999999999998 4568899999987642  23455677899999999999999999999888999999999


Q ss_pred             cCCCCHhhhhhhC---CCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc---------------------
Q 039276          110 MPHGSLGKCLSTS---NYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ---------------------  165 (263)
Q Consensus       110 ~~~~~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~---------------------  165 (263)
                      +++++|.+++...   ...+++..++.++.|++.||+|||+.+++|+||+|+||+....                     
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~  160 (256)
T cd08530          81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKT  160 (256)
T ss_pred             cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccCCccc
Confidence            9999999998652   2337888999999999999999999999999999999985432                     


Q ss_pred             ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccccc
Q 039276          166 TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFM  233 (263)
Q Consensus       166 ~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (263)
                      ..++..|++|            |+||||+++++|++|+.||......  .+....   .               .....+
T Consensus       161 ~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~--~~~~~~---~---------------~~~~~~  220 (256)
T cd08530         161 QIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ--DLRYKV---Q---------------RGKYPP  220 (256)
T ss_pred             ccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHH---h---------------cCCCCC
Confidence            1356778888            9999999999999999998643111  111000   0               000111


Q ss_pred             chHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          234 TKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       234 ~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .+...+.++.+++.+||+.+|++|||+.++
T Consensus       221 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~  250 (256)
T cd08530         221 IPPIYSQDLQNFIRSMLQVKPKLRPNCDKI  250 (256)
T ss_pred             CchhhCHHHHHHHHHHcCCCcccCCCHHHH
Confidence            234566779999999999999999998764

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.98  E-value=6.2e-32  Score=228.73  Aligned_cols=230  Identities=19%  Similarity=0.186  Sum_probs=165.7

Q ss_pred             ccccccccceecccCceEEEEEE-ecCCceEEEEEeecC--CCchHHHHHHHHHHHhhcCCCcceeEeeEeec-CCeeEE
Q 039276           30 GLFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQ--YGGAFKNLDVECNMMKIIRHQNLIKIISSCSK-DDFKAL  105 (263)
Q Consensus        30 ~~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~l  105 (263)
                      ...+|+..+.||.|+||.||++. ..++..+++|++...  .....+.+..|+++++.++|||++++.+++.. ....++
T Consensus         8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~l   87 (328)
T cd07856           8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYF   87 (328)
T ss_pred             cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEE
Confidence            34559999999999999999998 557899999988643  22345667789999999999999999998865 557899


Q ss_pred             EEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc--------------------
Q 039276          106 ILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ--------------------  165 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~--------------------  165 (263)
                      ++|++ +++|..++....  ++...+..++.|++.||+|||+.+++|+||+|+||+.+..                    
T Consensus        88 v~e~~-~~~L~~~~~~~~--~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~~~  164 (328)
T cd07856          88 VTELL-GTDLHRLLTSRP--LEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDPQMTG  164 (328)
T ss_pred             Eeehh-ccCHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCCCcCC
Confidence            99998 458988886433  6778888899999999999999999999999999996432                    


Q ss_pred             ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhh-----------HhhhcCCCchhhhhh
Q 039276          166 TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKH-----------WVNDLLPNSVMKVVS  221 (263)
Q Consensus       166 ~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~  221 (263)
                      ..++..|+||             |||||||++++|++|+.||...... ..+..           +..............
T Consensus       165 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (328)
T cd07856         165 YVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHV-NQFSIITDLLGTPPDDVINTICSENTLRFVQ  243 (328)
T ss_pred             CcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHHhccchhhHHHHh
Confidence            1346678888             9999999999999999998643210 11111           111111111111111


Q ss_pred             hcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          222 ANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ................+++++.+++.+||+.+|++|||++++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~el  285 (328)
T cd07856         244 SLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEA  285 (328)
T ss_pred             hccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHH
Confidence            100000000000112356789999999999999999998764

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.98  E-value=9.2e-32  Score=220.83  Aligned_cols=210  Identities=19%  Similarity=0.269  Sum_probs=164.8

Q ss_pred             cccccceecccCceEEEEEEe-cCCceEEEEEeecC-----CCchHHHHHHHHHHHhhcCCCcceeEeeEeecC--CeeE
Q 039276           33 LFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQ-----YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKD--DFKA  104 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~-----~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~--~~~~  104 (263)
                      .|+..+.||+|++|.||++.. .++..+++|.+...     .......+.+|++++++++|+|++++++.+.+.  +..+
T Consensus         3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~   82 (264)
T cd06653           3 NWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLS   82 (264)
T ss_pred             ceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEE
Confidence            488899999999999999984 56899999988543     123455778899999999999999999988654  4688


Q ss_pred             EEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-------------------
Q 039276          105 LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-------------------  165 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-------------------  165 (263)
                      +++||+++++|.+++..... +++..+..++.|++.||+|||+.+++|+||+|+||+.+.+                   
T Consensus        83 ~v~e~~~~~~L~~~~~~~~~-l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~  161 (264)
T cd06653          83 IFVEYMPGGSIKDQLKAYGA-LTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICM  161 (264)
T ss_pred             EEEEeCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECccccccccccccc
Confidence            99999999999999876544 7888899999999999999999999999999999995422                   


Q ss_pred             -------ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccc
Q 039276          166 -------TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLS  226 (263)
Q Consensus       166 -------~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (263)
                             ..++..|+||            |+|||||++++|++|+.||......                ..+. ...  
T Consensus       162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----------------~~~~-~~~--  222 (264)
T cd06653         162 SGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAM----------------AAIF-KIA--  222 (264)
T ss_pred             cCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHH----------------HHHH-HHH--
Confidence                   1356778999            9999999999999999998642111                0000 000  


Q ss_pred             cccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          227 REDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       227 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ..+.+...+..+++++.+++.+||+ +|..|||+.++
T Consensus       223 ~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~  258 (264)
T cd06653         223 TQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFL  258 (264)
T ss_pred             cCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHH
Confidence            0011112345667789999999999 57999998653

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.98  E-value=5.1e-32  Score=231.53  Aligned_cols=228  Identities=19%  Similarity=0.215  Sum_probs=164.3

Q ss_pred             cccccccceecccCceEEEEEE-ecCCceEEEEEeecC--CCchHHHHHHHHHHHhhcCCCcceeEeeEeecC------C
Q 039276           31 LFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQ--YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKD------D  101 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~------~  101 (263)
                      ..+|+..+.||+|+||.||++. ..++..||+|.+...  .......+.+|+.+++.++|+|++++++++...      .
T Consensus        15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   94 (353)
T cd07850          15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQ   94 (353)
T ss_pred             hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccC
Confidence            4569999999999999999999 456899999998643  233455677899999999999999999987543      3


Q ss_pred             eeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc----------------
Q 039276          102 FKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ----------------  165 (263)
Q Consensus       102 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~----------------  165 (263)
                      ..++++||+.+ +|.+.+...   ++...+..++.|++.||+|||..+++|+||||+||+.+..                
T Consensus        95 ~~~lv~e~~~~-~l~~~~~~~---l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~  170 (353)
T cd07850          95 DVYLVMELMDA-NLCQVIQMD---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT  170 (353)
T ss_pred             cEEEEEeccCC-CHHHHHhhc---CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCCC
Confidence            57999999965 888877543   7888899999999999999999999999999999995432                


Q ss_pred             ------ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCC--chhhhhhh---
Q 039276          166 ------TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPN--SVMKVVSA---  222 (263)
Q Consensus       166 ------~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~---  222 (263)
                            ..++..|+||            |||||||++++|++|+.||..... ...+..........  ........   
T Consensus       171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (353)
T cd07850         171 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDH-IDQWNKIIEQLGTPSDEFMSRLQPTVR  249 (353)
T ss_pred             CCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCH-HHHHHHHHHhcCCCCHHHHHHhhhhhh
Confidence                  2356779999            999999999999999999863211 01111111111000  00000000   


Q ss_pred             -cccccc-----------------cccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          223 -NLLSRE-----------------DEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       223 -~~~~~~-----------------~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                       ......                 ..........++++.+++.+||+.||++|||+.|+
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ei  308 (353)
T cd07850         250 NYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDA  308 (353)
T ss_pred             HHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHH
Confidence             000000                 00000022456678999999999999999999874

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.98  E-value=3.2e-32  Score=222.97  Aligned_cols=202  Identities=22%  Similarity=0.301  Sum_probs=159.8

Q ss_pred             ecccCceEEEEEEec-CCceEEEEEeecCCC---chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccCCCCH
Q 039276           40 ISRGGFGSIYKAKIQ-DGMEVVVKGFNLQYG---GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSL  115 (263)
Q Consensus        40 lg~g~~g~v~~~~~~-~~~~v~vK~~~~~~~---~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L  115 (263)
                      ||.|+||.||++... +++.+++|.+.....   .....+.+|+++++.++|+|++++++.+......++++|++++++|
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL   80 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence            589999999999955 589999999976533   3456778899999999999999999999888899999999999999


Q ss_pred             hhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc------------------------------
Q 039276          116 GKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ------------------------------  165 (263)
Q Consensus       116 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~------------------------------  165 (263)
                      .+++.... .+++..++.++.|++.||+|||+.+++|+||+|+||+.+..                              
T Consensus        81 ~~~l~~~~-~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  159 (265)
T cd05579          81 ASLLENVG-SLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDK  159 (265)
T ss_pred             HHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccccccc
Confidence            99998755 48999999999999999999999999999999999995421                              


Q ss_pred             -ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccc
Q 039276          166 -TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHF  232 (263)
Q Consensus       166 -~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (263)
                       ..++..|++|            ||||||+++++|++|+.||...... ..+.....    .        .      ...
T Consensus       160 ~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~-~~~~~~~~----~--------~------~~~  220 (265)
T cd05579         160 RIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE-EIFQNILN----G--------K------IEW  220 (265)
T ss_pred             CcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHhc----C--------C------cCC
Confidence             1245568888            9999999999999999998642111 00000000    0        0      000


Q ss_pred             cchHHHHHHHHHhhccccccCcCCCCCcc
Q 039276          233 MTKEQCMSFVFNLAMECTVESPNQRINAK  261 (263)
Q Consensus       233 ~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~  261 (263)
                      +.....+..+.+++.+||+.+|++|||+.
T Consensus       221 ~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~  249 (265)
T cd05579         221 PEDVEVSDEAIDLISKLLVPDPEKRLGAK  249 (265)
T ss_pred             CccccCCHHHHHHHHHHhcCCHhhcCCCc
Confidence            11112367799999999999999999993

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.98  E-value=4.9e-32  Score=224.29  Aligned_cols=228  Identities=21%  Similarity=0.199  Sum_probs=168.4

Q ss_pred             ccccceecccCceEEEEEEe-cCCceEEEEEeecCCC--chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           34 FSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYG--GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~--~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      |+..+.||+|++|.||++.. .++..+++|.+.....  .....+..|+++++.++|+|++++++++.+....++++||+
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   80 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM   80 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence            56678899999999999984 4688999999876532  24567778999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------cc
Q 039276          111 PHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------TL  167 (263)
Q Consensus       111 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------~~  167 (263)
                      ++ ++.+++......+++..+..++.|++.||.|||+.+++|+||+|+||+.+..                       ..
T Consensus        81 ~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~  159 (283)
T cd05118          81 DT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHYV  159 (283)
T ss_pred             CC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccCcc
Confidence            76 8888887655558999999999999999999999999999999999995531                       23


Q ss_pred             ccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhc---CCCchhhhhh---hc----c
Q 039276          168 ATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDL---LPNSVMKVVS---AN----L  224 (263)
Q Consensus       168 g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~---~~~~~~~~~~---~~----~  224 (263)
                      ++..|+||             ||||||+++++|++|+.||...... ..+.......   .+........   ..    .
T Consensus       160 ~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (283)
T cd05118         160 VTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEI-DQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFP  238 (283)
T ss_pred             CcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHcCCCchHhcccchhhhhhhhhhhc
Confidence            45568888             9999999999999999998543211 1111111100   0000000000   00    0


Q ss_pred             cccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          225 LSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       225 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .............++.++.+++.+||+.||.+||+++++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~l  277 (283)
T cd05118         239 KKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQA  277 (283)
T ss_pred             cccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHH
Confidence            000000011234567889999999999999999999864

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.98  E-value=3.2e-32  Score=231.37  Aligned_cols=229  Identities=21%  Similarity=0.232  Sum_probs=165.1

Q ss_pred             cccccccceecccCceEEEEEEec-CCceEEEEEeecC--CCchHHHHHHHHHHHhhc-CCCcceeEeeEeec--CCeeE
Q 039276           31 LFLFSESNLISRGGFGSIYKAKIQ-DGMEVVVKGFNLQ--YGGAFKNLDVECNMMKII-RHQNLIKIISSCSK--DDFKA  104 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~~-~~~~v~vK~~~~~--~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~--~~~~~  104 (263)
                      ..+|+..+.||+|+||.||+|... ++..+++|++...  .......+..|+.+++++ +|+||+++++++..  ....+
T Consensus         6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~   85 (337)
T cd07852           6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIY   85 (337)
T ss_pred             hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEE
Confidence            456999999999999999999954 5889999988543  223345567899999999 99999999998854  34689


Q ss_pred             EEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-------------------
Q 039276          105 LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-------------------  165 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-------------------  165 (263)
                      +++||+++ +|.+++...  .+++..+..++.|++.||+|||+++++|+||+|+||+.+..                   
T Consensus        86 lv~e~~~~-~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~  162 (337)
T cd07852          86 LVFEYMET-DLHAVIRAN--ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEE  162 (337)
T ss_pred             EEeccccc-CHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhccccccc
Confidence            99999975 999988765  47888888999999999999999999999999999985332                   


Q ss_pred             ---------ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCC----------
Q 039276          166 ---------TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLP----------  213 (263)
Q Consensus       166 ---------~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~----------  213 (263)
                               ..|+..|+||             ||||||+++|+|++|+.||......+ ...........          
T Consensus       163 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  241 (337)
T cd07852         163 NPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLN-QLEKIIEVIGPPSAEDIESIK  241 (337)
T ss_pred             cccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCCHHHHHHHH
Confidence                     1356678999             99999999999999999986432111 11111111000          


Q ss_pred             -CchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          214 -NSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       214 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                       ........................++.++.+++.+||+.+|++|||+.++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~i  292 (337)
T cd07852         242 SPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEA  292 (337)
T ss_pred             hhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHH
Confidence             00000010000000000001112356789999999999999999998764

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.98  E-value=7.8e-32  Score=229.52  Aligned_cols=228  Identities=19%  Similarity=0.216  Sum_probs=164.3

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecCC------e
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDD------F  102 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~------~  102 (263)
                      .+|...+.||+|++|.||++. ..++..||+|.+....  ......+.+|+++++.++|+||+++++.+....      .
T Consensus        15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   94 (343)
T cd07880          15 DRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHD   94 (343)
T ss_pred             cceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccce
Confidence            459999999999999999998 5568999999986432  223456778999999999999999999886543      3


Q ss_pred             eEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------
Q 039276          103 KALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------  165 (263)
Q Consensus       103 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------  165 (263)
                      .++++|++ +++|.+++...  .+++..+..++.|++.||+|||..+++|+||+|+||+....                 
T Consensus        95 ~~lv~e~~-~~~l~~~~~~~--~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~  171 (343)
T cd07880          95 FYLVMPFM-GTDLGKLMKHE--KLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDSE  171 (343)
T ss_pred             EEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccccccccC
Confidence            58999998 66998888643  37889999999999999999999999999999999996432                 


Q ss_pred             ---ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhh-----------cCCCchhh
Q 039276          166 ---TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVND-----------LLPNSVMK  218 (263)
Q Consensus       166 ---~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~-----------~~~~~~~~  218 (263)
                         ..++..|+||             |+|||||++++|++|+.||...... ..+......           ........
T Consensus       172 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (343)
T cd07880         172 MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHL-DQLMEIMKVTGTPSKEFVQKLQSEDAKN  250 (343)
T ss_pred             ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCCHHHHHhhcchhHHH
Confidence               2356778888             9999999999999999998643211 111111110           00000000


Q ss_pred             hhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          219 VVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ...................+++++.+++.+|++.||++|||+.++
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~  295 (343)
T cd07880         251 YVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEA  295 (343)
T ss_pred             HHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHH
Confidence            000000000000000113456678999999999999999998764

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.98  E-value=1.1e-31  Score=224.38  Aligned_cols=231  Identities=18%  Similarity=0.173  Sum_probs=165.7

Q ss_pred             cccccccceecccCceEEEEEEe-cCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecCC------
Q 039276           31 LFLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDD------  101 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~------  101 (263)
                      ...|+..+.||+|++|.||+|.. .++..|++|.+....  ......+.+|+++++.++|||++++++++.+..      
T Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~   85 (302)
T cd07864           6 VDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFK   85 (302)
T ss_pred             hhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhcc
Confidence            35699999999999999999995 458899999997653  223345678999999999999999999886543      


Q ss_pred             ----eeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc-----------
Q 039276          102 ----FKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT-----------  166 (263)
Q Consensus       102 ----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~-----------  166 (263)
                          ..++++||+++ ++.+++......+++..+..++.|++.||+|||+.+++|+||+|+||+.+...           
T Consensus        86 ~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~  164 (302)
T cd07864          86 KDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLAR  164 (302)
T ss_pred             ccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCcccccc
Confidence                78999999976 77777766544589999999999999999999999999999999999854321           


Q ss_pred             -------------cccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCC---chh
Q 039276          167 -------------LATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPN---SVM  217 (263)
Q Consensus       167 -------------~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~---~~~  217 (263)
                                   .++..|+||             |||||||+++||++|+.||.... ....+..+.......   ...
T Consensus       165 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  243 (302)
T cd07864         165 LYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQ-ELAQLELISRLCGSPCPAVWP  243 (302)
T ss_pred             cccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHHhCCCChhhcc
Confidence                         235568888             99999999999999999986421 111111111110000   000


Q ss_pred             hhhhhcccc----cc---cccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          218 KVVSANLLS----RE---DEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       218 ~~~~~~~~~----~~---~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .+.......    ..   .........++..+.+++.+||+.+|++|||+++|
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~i  296 (302)
T cd07864         244 DVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEA  296 (302)
T ss_pred             cccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHH
Confidence            000000000    00   00000122356779999999999999999999764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.98  E-value=9.3e-32  Score=228.30  Aligned_cols=230  Identities=19%  Similarity=0.177  Sum_probs=164.6

Q ss_pred             cccccc-cceecccCceEEEEEE-ecCCceEEEEEeecCCCch--------------HHHHHHHHHHHhhcCCCcceeEe
Q 039276           31 LFLFSE-SNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGA--------------FKNLDVECNMMKIIRHQNLIKII   94 (263)
Q Consensus        31 ~~~y~~-~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~~--------------~~~~~~e~~~l~~~~h~~i~~~~   94 (263)
                      ..+|.. .+.||.|+||.||++. ..+++.||+|.+.......              ...+.+|+++++.++|+|+++++
T Consensus         7 ~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~   86 (335)
T PTZ00024          7 SERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLV   86 (335)
T ss_pred             ccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeee
Confidence            445764 5779999999999998 4468999999986542211              12467899999999999999999


Q ss_pred             eEeecCCeeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc--------
Q 039276           95 SSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT--------  166 (263)
Q Consensus        95 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~--------  166 (263)
                      +++...+..+++||++. ++|.+++..... ++......++.|++.||+|||+.+++|+||+|+||+.....        
T Consensus        87 ~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~-~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg  164 (335)
T PTZ00024         87 DVYVEGDFINLVMDIMA-SDLKKVVDRKIR-LTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFG  164 (335)
T ss_pred             EEEecCCcEEEEEeccc-cCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCcc
Confidence            99999999999999997 599998875443 88899999999999999999999999999999999843221        


Q ss_pred             -----------------------------cccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchh
Q 039276          167 -----------------------------LATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTL  204 (263)
Q Consensus       167 -----------------------------~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~  204 (263)
                                                   .++..|+||             |||||||+++||++|+.||...... ..+
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~-~~~  243 (335)
T PTZ00024        165 LARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEI-DQL  243 (335)
T ss_pred             ceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHH
Confidence                                         235568888             9999999999999999998643211 111


Q ss_pred             hhHhhhcCCCc---hhhhhhhc-----ccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          205 KHWVNDLLPNS---VMKVVSAN-----LLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       205 ~~~~~~~~~~~---~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ...........   ........     ..............+++++.+++.+||+.+|++|||++|+
T Consensus       244 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~  310 (335)
T PTZ00024        244 GRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEA  310 (335)
T ss_pred             HHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHH
Confidence            11111000000   00000000     0000000000112346678999999999999999999875

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.98  E-value=7.5e-32  Score=224.04  Aligned_cols=216  Identities=19%  Similarity=0.212  Sum_probs=161.0

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCC-CchHHHHHHHHHHHhhcC-CCcceeEeeEeecCCeeEEEEe
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY-GGAFKNLDVECNMMKIIR-HQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      ++|...+.||+|+||.||++. ..+++.+++|.+.... ......+.+|+.++.++. |+|++++++++...+..++++|
T Consensus         4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e   83 (288)
T cd06616           4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICME   83 (288)
T ss_pred             HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEe
Confidence            347778899999999999998 4568999999987553 234556788999998885 9999999999988888999999


Q ss_pred             ccCCCCHhhhhh---h-CCCcccHHHHHHHHHHHHHHHHHhcc-CCccccccCCCccccccc------------------
Q 039276          109 CMPHGSLGKCLS---T-SNYILDFFQRLHIMIDVASAVEYLHF-GHSTHLLLKEDQSLTQIQ------------------  165 (263)
Q Consensus       109 ~~~~~~L~~~l~---~-~~~~~~~~~~~~i~~~i~~~l~~lH~-~~i~h~dlk~~nil~~~~------------------  165 (263)
                      ++.. ++.++..   . ....+++..+..++.+++.||+|||+ .+++|+||+|+||+.+..                  
T Consensus        84 ~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~  162 (288)
T cd06616          84 LMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSI  162 (288)
T ss_pred             cccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCC
Confidence            9865 5554332   1 22348889999999999999999997 499999999999985421                  


Q ss_pred             ----ccccccccCc---------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccc
Q 039276          166 ----TLATISYMAP---------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLS  226 (263)
Q Consensus       166 ----~~g~~~y~aP---------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (263)
                          ..|+..|+||               |||||||++++|++|+.||....   ......... .....     ...  
T Consensus       163 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~---~~~~~~~~~-~~~~~-----~~~--  231 (288)
T cd06616         163 AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN---SVFDQLTQV-VKGDP-----PIL--  231 (288)
T ss_pred             ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc---hHHHHHhhh-cCCCC-----CcC--
Confidence                1356678887               99999999999999999986431   111110000 00000     000  


Q ss_pred             cccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          227 REDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       227 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                          .......++.++.+++.+||+.+|++|||+++|
T Consensus       232 ----~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i  264 (288)
T cd06616         232 ----SNSEEREFSPSFVNFINLCLIKDESKRPKYKEL  264 (288)
T ss_pred             ----CCcCCCccCHHHHHHHHHHccCChhhCcCHHHH
Confidence                001123467779999999999999999999875

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.97  E-value=3.6e-32  Score=231.55  Aligned_cols=228  Identities=19%  Similarity=0.207  Sum_probs=164.7

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecC--CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCe------
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQ--YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDF------  102 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~------  102 (263)
                      .+|+..+.||+|++|.||+|.. .++..|++|.+...  .....+.+.+|+.+++.++|+|++++.+.+...+.      
T Consensus        15 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   94 (343)
T cd07851          15 DRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQD   94 (343)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccccc
Confidence            4599999999999999999995 45889999998653  22344567789999999999999999887765443      


Q ss_pred             eEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------
Q 039276          103 KALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------  165 (263)
Q Consensus       103 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------  165 (263)
                      .++++|++ +++|.+++...  .+++..+..++.|++.||+|||+.+++|+||+|+||+....                 
T Consensus        95 ~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~  171 (343)
T cd07851          95 VYLVTHLM-GADLNNIVKCQ--KLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDDE  171 (343)
T ss_pred             EEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEcccccccccccc
Confidence            89999998 56999988753  38899999999999999999999999999999999996432                 


Q ss_pred             ---ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhc-----------CCCchhh
Q 039276          166 ---TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDL-----------LPNSVMK  218 (263)
Q Consensus       166 ---~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~-----------~~~~~~~  218 (263)
                         ..++..|+||             |||||||++++|++|+.||..... ...+.......           .......
T Consensus       172 ~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  250 (343)
T cd07851         172 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDH-IDQLKRIMNLVGTPDEELLQKISSESARN  250 (343)
T ss_pred             ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHhcCCCCHHHHhhccchhHHH
Confidence               2456678888             999999999999999999864211 11111111110           0000000


Q ss_pred             hhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          219 VVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ....................++++.+++.+||+.+|++|||+.+|
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~el  295 (343)
T cd07851         251 YIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEA  295 (343)
T ss_pred             HHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHH
Confidence            000000000000000112346789999999999999999999874

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.97  E-value=4.1e-32  Score=224.29  Aligned_cols=206  Identities=21%  Similarity=0.296  Sum_probs=166.2

Q ss_pred             cccccceecccCceEEEEEEe-cCCceEEEEEeecCC---CchHHHHHHHHHHHhhcC-CCcceeEeeEeecCCeeEEEE
Q 039276           33 LFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIR-HQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      +|...+.||+|++|.||++.. .++..+++|++....   ......+..|.++++.++ |+||+++++.+.+.+..+++|
T Consensus         2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~   81 (280)
T cd05581           2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVL   81 (280)
T ss_pred             CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEE
Confidence            488899999999999999994 468999999987632   233456778999999998 999999999999889999999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc---------------------
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT---------------------  166 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~---------------------  166 (263)
                      |++++++|.+++..... +++..+..++.|++.||.+||+.+++|+|++|+||+.....                     
T Consensus        82 e~~~~~~L~~~l~~~~~-l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~  160 (280)
T cd05581          82 EYAPNGELLQYIRKYGS-LDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPES  160 (280)
T ss_pred             cCCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCcccccc
Confidence            99999999999987654 89999999999999999999999999999999999954311                     


Q ss_pred             ----------------------cccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcC
Q 039276          167 ----------------------LATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLL  212 (263)
Q Consensus       167 ----------------------~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~  212 (263)
                                            .++..|+||            ||||||++++++++|+.||..... ...+...     
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-~~~~~~~-----  234 (280)
T cd05581         161 NKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNE-YLTFQKI-----  234 (280)
T ss_pred             CCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccH-HHHHHHH-----
Confidence                                  245678888            999999999999999999864321 0001100     


Q ss_pred             CCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCc
Q 039276          213 PNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINA  260 (263)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~  260 (263)
                             ..        .....+...++.+.+++.+||+.+|++|||+
T Consensus       235 -------~~--------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~  267 (280)
T cd05581         235 -------LK--------LEYSFPPNFPPDAKDLIEKLLVLDPQDRLGV  267 (280)
T ss_pred             -------Hh--------cCCCCCCccCHHHHHHHHHHhcCCHhhCCCc
Confidence                   00        0011233446679999999999999999999

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.97  E-value=8.3e-32  Score=225.91  Aligned_cols=231  Identities=18%  Similarity=0.175  Sum_probs=162.7

Q ss_pred             cccccccceecccCceEEEEEEe-cCCceEEEEEeecCCCc--hHHHHHHHHHHHhhcCCCcceeEeeEeecC-------
Q 039276           31 LFLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGG--AFKNLDVECNMMKIIRHQNLIKIISSCSKD-------  100 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~--~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-------  100 (263)
                      ..+|+..+.||+|++|.||++.. .+++.+++|.+......  ......+|+++++.++|+||+++++.+.+.       
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   86 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK   86 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence            35699999999999999999994 46899999999755322  234567899999999999999999877433       


Q ss_pred             -CeeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc-------------
Q 039276          101 -DFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT-------------  166 (263)
Q Consensus       101 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~-------------  166 (263)
                       ...++++||+.+ ++...+......+++..+..++.|++.||+|||+++++|+||+|+||+.....             
T Consensus        87 ~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  165 (311)
T cd07866          87 RGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARPY  165 (311)
T ss_pred             CceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccchhc
Confidence             356999999965 77777765554589999999999999999999999999999999999854321             


Q ss_pred             ---------------------cccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcC
Q 039276          167 ---------------------LATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLL  212 (263)
Q Consensus       167 ---------------------~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~  212 (263)
                                           .+++.|+||             |||||||++|||++|+.||...... ...........
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~-~~~~~~~~~~~  244 (311)
T cd07866         166 DGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDI-DQLHLIFKLCG  244 (311)
T ss_pred             cCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhC
Confidence                                 235568888             9999999999999999998642211 11111111000


Q ss_pred             C---Cch------hhhhhhccccc-ccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          213 P---NSV------MKVVSANLLSR-EDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       213 ~---~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .   ...      ........... ............+++.+++.+||+.+|++|||+.|+
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~el  305 (311)
T cd07866         245 TPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDA  305 (311)
T ss_pred             CCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHH
Confidence            0   000      00000000000 000000012234668999999999999999998764

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.97  E-value=5.1e-32  Score=229.37  Aligned_cols=228  Identities=19%  Similarity=0.174  Sum_probs=167.7

Q ss_pred             cccccceecccCceEEEEEEec-CCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecCC-----eeE
Q 039276           33 LFSESNLISRGGFGSIYKAKIQ-DGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDD-----FKA  104 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~~-~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-----~~~  104 (263)
                      +|...+.||+|++|.||++... ++..+++|.+....  ....+.+..|+++++.++|+|++++.+++.+..     ..|
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY   80 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence            4788899999999999999954 58999999997653  345667888999999999999999999987764     789


Q ss_pred             EEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-------------------
Q 039276          105 LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-------------------  165 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-------------------  165 (263)
                      +++||+++ +|.+++.... .+++..+..++.|++.||++||+++++|+||+|+||+....                   
T Consensus        81 lv~e~~~~-~l~~~l~~~~-~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~  158 (330)
T cd07834          81 IVTELMET-DLHKVIKSPQ-PLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDED  158 (330)
T ss_pred             EEecchhh-hHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeeccccc
Confidence            99999975 8998887654 48899999999999999999999999999999999995432                   


Q ss_pred             -------ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcC-----------CC
Q 039276          166 -------TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLL-----------PN  214 (263)
Q Consensus       166 -------~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~-----------~~  214 (263)
                             ..++..|+||             ||||||+++++|++|+.||...... ..+........           ..
T Consensus       159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~  237 (330)
T cd07834         159 EKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYI-DQLNLIVEVLGTPSEEDLKFITSE  237 (330)
T ss_pred             ccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHH-HHHHHHHHhcCCCChhHhhhcccc
Confidence                   1346668888             9999999999999999998643211 11111111100           00


Q ss_pred             chhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          215 SVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .....+..................+.++.+++.+||+.+|++|||++++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~l  286 (330)
T cd07834         238 KARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEA  286 (330)
T ss_pred             chhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHH
Confidence            0000110000000000000112356779999999999999999998764

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.97  E-value=2.2e-32  Score=233.05  Aligned_cols=219  Identities=19%  Similarity=0.316  Sum_probs=174.0

Q ss_pred             ccccccceecccCceEEEEEEecCCceEEEEEeecCCCch-HHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGA-FKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~-~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      +.....++||+|.||.|.+|....+.+||||.++.....+ +..+..||.+|.+++||||+.++++|...+..++++||+
T Consensus       538 s~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYm  617 (807)
T KOG1094|consen  538 SRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYM  617 (807)
T ss_pred             hheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHH
Confidence            4577889999999999999998878999999998876554 588999999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhhCCCc-ccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc-----------------------
Q 039276          111 PHGSLGKCLSTSNYI-LDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT-----------------------  166 (263)
Q Consensus       111 ~~~~L~~~l~~~~~~-~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~-----------------------  166 (263)
                      ++|+|.+|+..+... ..-.....|+.||+.||+||.+.++||||+.+.|+|.+...                       
T Consensus       618 EnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqg  697 (807)
T KOG1094|consen  618 ENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQG  697 (807)
T ss_pred             hcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccCCceeeec
Confidence            999999999876432 23445567999999999999999999999999999965432                       


Q ss_pred             --cccccccCc------------chhhHHHHHHHHHh--CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccc
Q 039276          167 --LATISYMAP------------DTYNFGIMIMETFS--GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDE  230 (263)
Q Consensus       167 --~g~~~y~aP------------Dv~SlG~il~ell~--g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (263)
                        +-...|||+            |||+||+++||+++  ...||.+..+++  ..+-.....+..-..           .
T Consensus       698 r~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~--vven~~~~~~~~~~~-----------~  764 (807)
T KOG1094|consen  698 RAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQ--VVENAGEFFRDQGRQ-----------V  764 (807)
T ss_pred             ceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHH--HHHhhhhhcCCCCcc-----------e
Confidence              124568888            99999999999875  888987542221  111111111111111           1


Q ss_pred             cccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          231 HFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       231 ~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ....+..|+..+.+++.+||..+-++|||+++|
T Consensus       765 ~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~l  797 (807)
T KOG1094|consen  765 VLSRPPACPQGLYELMLRCWRRESEQRPSFEQL  797 (807)
T ss_pred             eccCCCcCcHHHHHHHHHHhchhhhcCCCHHHH
Confidence            123467888889999999999999999999864

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.97  E-value=1.3e-31  Score=220.85  Aligned_cols=210  Identities=23%  Similarity=0.392  Sum_probs=157.6

Q ss_pred             ccccceecccCceEEEEEEec----CCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecCC------
Q 039276           34 FSESNLISRGGFGSIYKAKIQ----DGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDD------  101 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~~----~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~------  101 (263)
                      |...+.||+|+||.||+|...    +++.+++|.+....  ....+.+.+|+++++.++|||++++++++....      
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   80 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP   80 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence            456788999999999999743    36889999997652  234566788999999999999999999875432      


Q ss_pred             eeEEEEeccCCCCHhhhhhhC-----CCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc----------
Q 039276          102 FKALILECMPHGSLGKCLSTS-----NYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT----------  166 (263)
Q Consensus       102 ~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~----------  166 (263)
                      ..++++||+++++|..++...     ...++...+..++.|++.||+|||+.+++|+||||+||+.+...          
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~  160 (273)
T cd05074          81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLS  160 (273)
T ss_pred             ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECccccc
Confidence            347899999999998876432     12368888999999999999999999999999999999954321          


Q ss_pred             ---------------cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhh
Q 039276          167 ---------------LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMK  218 (263)
Q Consensus       167 ---------------~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~  218 (263)
                                     .++..|++|            |||||||++|||++ |+.||.....  ..+..+.....      
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~--~~~~~~~~~~~------  232 (273)
T cd05074         161 KKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN--SEIYNYLIKGN------  232 (273)
T ss_pred             ccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH--HHHHHHHHcCC------
Confidence                           123567777            99999999999999 8888753211  11111111000      


Q ss_pred             hhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          219 VVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                                  ....+..+++.+.+++.+||+.+|++|||+.+|
T Consensus       233 ------------~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~  265 (273)
T cd05074         233 ------------RLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHL  265 (273)
T ss_pred             ------------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence                        001122345679999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.97  E-value=1.6e-31  Score=222.98  Aligned_cols=215  Identities=18%  Similarity=0.189  Sum_probs=162.5

Q ss_pred             cccccccceecccCceEEEEEEec-CCceEEEEEeecCCC-chHHHHHHHHHHHhhc-CCCcceeEeeEeecCCeeEEEE
Q 039276           31 LFLFSESNLISRGGFGSIYKAKIQ-DGMEVVVKGFNLQYG-GAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~~-~~~~v~vK~~~~~~~-~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      .+.|+..+.||+|++|.||++.+. +++.+++|.+..... .....+..|+..+.+. +|+|++++++++.+....++++
T Consensus        14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~   93 (296)
T cd06618          14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM   93 (296)
T ss_pred             cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence            356899999999999999999965 488999999976532 3345566677766666 5999999999999999999999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhcc-CCccccccCCCcccccccc--------------------
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHF-GHSTHLLLKEDQSLTQIQT--------------------  166 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~-~~i~h~dlk~~nil~~~~~--------------------  166 (263)
                      ||+++ ++.+++......+++..+..++.|++.||+|||. .+++|+||+|+||+.+...                    
T Consensus        94 e~~~~-~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~~~  172 (296)
T cd06618          94 ELMST-CLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAKT  172 (296)
T ss_pred             eccCc-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhccCCCccc
Confidence            99855 7777776544458888999999999999999997 5999999999999964321                    


Q ss_pred             --cccccccCc----------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccc
Q 039276          167 --LATISYMAP----------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSRE  228 (263)
Q Consensus       167 --~g~~~y~aP----------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (263)
                        .++..|+||                ||||||+++++|++|+.||.........+.......                 
T Consensus       173 ~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~-----------------  235 (296)
T cd06618         173 RSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEE-----------------  235 (296)
T ss_pred             CCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCC-----------------
Confidence              245567777                999999999999999999864211111111111100                 


Q ss_pred             cccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          229 DEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       229 ~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ....+....+++++.+++.+||+.+|++|||++++
T Consensus       236 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~i  270 (296)
T cd06618         236 PPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYREL  270 (296)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHH
Confidence            00001112356679999999999999999999864

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.97  E-value=2e-31  Score=220.78  Aligned_cols=228  Identities=16%  Similarity=0.142  Sum_probs=163.3

Q ss_pred             ccccceecccCceEEEEEEec-CCceEEEEEeecCCC-chHHHHHHHHHHHhhcC-CCcceeEeeEeecCCeeEEEEecc
Q 039276           34 FSESNLISRGGFGSIYKAKIQ-DGMEVVVKGFNLQYG-GAFKNLDVECNMMKIIR-HQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~~-~~~~v~vK~~~~~~~-~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      |+..+.||+|++|.||+|... +++.|++|.+..... .......+|+..++.++ |+|++++++.+.+.+..+++|||+
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~   80 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM   80 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence            566788999999999999954 578899999876532 22234456889999998 999999999999999999999999


Q ss_pred             CCCCHhhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc----------------------cc
Q 039276          111 PHGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ----------------------TL  167 (263)
Q Consensus       111 ~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~----------------------~~  167 (263)
                       +++|.+++.... ..+++..+..++.|++.+|.|||+.+++|+||+|+||+.+..                      ..
T Consensus        81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~  159 (283)
T cd07830          81 -EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTDYV  159 (283)
T ss_pred             -CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCCCCcCCCC
Confidence             779999887654 347999999999999999999999999999999999995431                      13


Q ss_pred             ccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCch---hh------hhhhccc
Q 039276          168 ATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSV---MK------VVSANLL  225 (263)
Q Consensus       168 g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~---~~------~~~~~~~  225 (263)
                      ++..|+||             |+||||++++||++|+.||...... ..+............   ..      .......
T Consensus       160 ~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (283)
T cd07830         160 STRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEI-DQLYKICSVLGTPTKQDWPEGYKLASKLGFRFP  238 (283)
T ss_pred             CcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChH-HHHHHHHHhcCCCChhhhhhHhhhhcccccccc
Confidence            56678888             9999999999999999998543211 111111110000000   00      0000000


Q ss_pred             ccccc-cccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          226 SREDE-HFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       226 ~~~~~-~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ..... ........+.++.+++.+||+.+|++|||++||
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei  277 (283)
T cd07830         239 QFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQA  277 (283)
T ss_pred             ccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHH
Confidence            00000 000011225679999999999999999999874

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.97  E-value=4e-31  Score=218.76  Aligned_cols=205  Identities=19%  Similarity=0.202  Sum_probs=154.7

Q ss_pred             eecccCceEEEEEEe-cCCceEEEEEeecCCCc---hHHHHHHHHH---HHhhcCCCcceeEeeEeecCCeeEEEEeccC
Q 039276           39 LISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGG---AFKNLDVECN---MMKIIRHQNLIKIISSCSKDDFKALILECMP  111 (263)
Q Consensus        39 ~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~---~~~~~~~e~~---~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~  111 (263)
                      .||+|+||.||++.. .+++.||+|.+......   .......|..   .++...|++++++.+.+.+.+..++++||++
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN   80 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence            479999999999984 55889999998764221   1122333333   3444579999999999999899999999999


Q ss_pred             CCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc---------------------ccccc
Q 039276          112 HGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ---------------------TLATI  170 (263)
Q Consensus       112 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~---------------------~~g~~  170 (263)
                      +++|..++.... .+++..+..++.|++.||+|||+.+++|+||+|+||+...+                     ..|+.
T Consensus        81 g~~L~~~l~~~~-~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~  159 (278)
T cd05606          81 GGDLHYHLSQHG-VFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTH  159 (278)
T ss_pred             CCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccCCcCcCCCc
Confidence            999999887644 38999999999999999999999999999999999985321                     24678


Q ss_pred             cccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHH
Q 039276          171 SYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQ  237 (263)
Q Consensus       171 ~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (263)
                      .|+||             ||||+||+++||++|+.||..........  .         .....       ......+..
T Consensus       160 ~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~--~---------~~~~~-------~~~~~~~~~  221 (278)
T cd05606         160 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE--I---------DRMTL-------TMAVELPDS  221 (278)
T ss_pred             CCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHH--H---------HHHhh-------ccCCCCCCc
Confidence            89998             99999999999999999986532111100  0         00000       001112334


Q ss_pred             HHHHHHHhhccccccCcCCCC-----CccC
Q 039276          238 CMSFVFNLAMECTVESPNQRI-----NAKE  262 (263)
Q Consensus       238 ~~~~l~~l~~~cl~~~p~~Rp-----t~~e  262 (263)
                      ++.++.+++.+|+..+|++||     ++.+
T Consensus       222 ~s~~~~~li~~~l~~~p~~R~~~~~~~~~~  251 (278)
T cd05606         222 FSPELRSLLEGLLQRDVNRRLGCLGRGAQE  251 (278)
T ss_pred             CCHHHHHHHHHHhhcCHHhccCCCCCCHHH
Confidence            567799999999999999999     6654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.97  E-value=1.3e-31  Score=219.40  Aligned_cols=211  Identities=18%  Similarity=0.185  Sum_probs=161.4

Q ss_pred             cccccceecccCceEEEEEEec-CCceEEEEEeecC-----CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEE
Q 039276           33 LFSESNLISRGGFGSIYKAKIQ-DGMEVVVKGFNLQ-----YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALI  106 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~~-~~~~v~vK~~~~~-----~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv  106 (263)
                      +|...+.||+|+||.||++... .+..+++|.++..     ..........|+.+++.++|||++++++.+.+....+++
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII   80 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence            4788899999999999999854 3444555555432     122344566789999999999999999999888889999


Q ss_pred             EeccCCCCHhhhhhh---CCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc------------------
Q 039276          107 LECMPHGSLGKCLST---SNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ------------------  165 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~------------------  165 (263)
                      +||+++++|.+++..   ....+++..++.++.|++.||.|||+.+++|+||+|+|++....                  
T Consensus        81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~~~~~l~d~g~~~~~~~~~~  160 (260)
T cd08222          81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKNNLLKIGDFGVSRLLMGSCD  160 (260)
T ss_pred             EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeecCCEeecccCceeecCCCcc
Confidence            999999999988864   23348899999999999999999999999999999999985421                  


Q ss_pred             ----ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccc
Q 039276          166 ----TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSRED  229 (263)
Q Consensus       166 ----~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (263)
                          ..|+..|+||            |+||||+++++|++|..||...    ........         ...       .
T Consensus       161 ~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~----~~~~~~~~---------~~~-------~  220 (260)
T cd08222         161 LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQ----NFLSVVLR---------IVE-------G  220 (260)
T ss_pred             cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCc----cHHHHHHH---------HHc-------C
Confidence                2356678888            9999999999999999998532    11110000         000       0


Q ss_pred             ccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          230 EHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       230 ~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .....+..++.++.+++.+||..+|++||++.|+
T Consensus       221 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i  254 (260)
T cd08222         221 PTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEI  254 (260)
T ss_pred             CCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHH
Confidence            0111234566779999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.97  E-value=3.9e-31  Score=219.98  Aligned_cols=209  Identities=18%  Similarity=0.208  Sum_probs=162.6

Q ss_pred             ccccceecccCceEEEEEEe----cCCceEEEEEeecCC----CchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCeeE
Q 039276           34 FSESNLISRGGFGSIYKAKI----QDGMEVVVKGFNLQY----GGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFKA  104 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~----~~~~~v~vK~~~~~~----~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~  104 (263)
                      |+..+.||+|+||.||.+..    .++..|++|.+....    ....+.+.+|+.+++.+ +|++|+++++.+......+
T Consensus         2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~   81 (290)
T cd05613           2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLH   81 (290)
T ss_pred             ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEE
Confidence            77889999999999999985    358899999987532    23346677899999999 6899999999998888999


Q ss_pred             EEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-------------------
Q 039276          105 LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-------------------  165 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-------------------  165 (263)
                      +++||+++++|.+++..... +++..+..++.|++.||.|||+.+++|+||+|+||+.+..                   
T Consensus        82 lv~e~~~~~~L~~~l~~~~~-l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~  160 (290)
T cd05613          82 LILDYINGGELFTHLSQRER-FKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEV  160 (290)
T ss_pred             EEEecCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceecccccc
Confidence            99999999999999976543 7888889999999999999999999999999999995321                   


Q ss_pred             -----ccccccccCc--------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccc
Q 039276          166 -----TLATISYMAP--------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLS  226 (263)
Q Consensus       166 -----~~g~~~y~aP--------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (263)
                           ..|+..|+||              ||||||+++++|++|+.||..... ......+.            ......
T Consensus       161 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~-~~~~~~~~------------~~~~~~  227 (290)
T cd05613         161 ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGE-KNSQAEIS------------RRILKS  227 (290)
T ss_pred             cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCc-cccHHHHH------------HHhhcc
Confidence                 1356778888              999999999999999999853111 11111111            100000


Q ss_pred             cccccccchHHHHHHHHHhhccccccCcCCCCCc
Q 039276          227 REDEHFMTKEQCMSFVFNLAMECTVESPNQRINA  260 (263)
Q Consensus       227 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~  260 (263)
                          ..+.+..++..+.+++.+||+.+|++||+.
T Consensus       228 ----~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~  257 (290)
T cd05613         228 ----EPPYPQEMSALAKDIIQRLLMKDPKKRLGC  257 (290)
T ss_pred             ----CCCCCccCCHHHHHHHHHHhcCCHHHhcCC
Confidence                011233456678999999999999999853

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.97  E-value=6.2e-31  Score=218.10  Aligned_cols=228  Identities=20%  Similarity=0.228  Sum_probs=163.0

Q ss_pred             ccccceecccCceEEEEEEec-CCceEEEEEeecCCC--chHHHHHHHHHHHhhc---CCCcceeEeeEeecCCe-----
Q 039276           34 FSESNLISRGGFGSIYKAKIQ-DGMEVVVKGFNLQYG--GAFKNLDVECNMMKII---RHQNLIKIISSCSKDDF-----  102 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~~-~~~~v~vK~~~~~~~--~~~~~~~~e~~~l~~~---~h~~i~~~~~~~~~~~~-----  102 (263)
                      |+..+.||+|++|.||++... ++..+++|.+.....  .....+.+|+.+++++   +|+|++++++.+.+...     
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~   80 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK   80 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence            567889999999999999965 589999999975422  2234455677776655   69999999999987665     


Q ss_pred             eEEEEeccCCCCHhhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc---------------
Q 039276          103 KALILECMPHGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT---------------  166 (263)
Q Consensus       103 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~---------------  166 (263)
                      .++++|++++ +|.+++.... ..+++..++.++.|++.||+|||+.+++|+|++|+||+.+...               
T Consensus        81 ~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~  159 (287)
T cd07838          81 LTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSF  159 (287)
T ss_pred             eEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceeccC
Confidence            8999999975 8988887543 2488999999999999999999999999999999999854321               


Q ss_pred             -------cccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhh-----
Q 039276          167 -------LATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSA-----  222 (263)
Q Consensus       167 -------~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  222 (263)
                             .++..|+||            |||||||+++||++|+.||.... ..+.+..+...............     
T Consensus       160 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (287)
T cd07838         160 EMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTS-EADQLDKIFDVIGLPSEEEWPRNVSLPR  238 (287)
T ss_pred             CcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCC-hHHHHHHHHHHcCCCChHhcCCCcccch
Confidence                   246668898            99999999999999999986422 12222222221111000000000     


Q ss_pred             ccccccccc--ccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          223 NLLSREDEH--FMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       223 ~~~~~~~~~--~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .........  .......++.+.+++.+||+.||++||++.++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~i  281 (287)
T cd07838         239 SSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEA  281 (287)
T ss_pred             hhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHH
Confidence            000000000  01123556788999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.97  E-value=2.1e-31  Score=221.40  Aligned_cols=211  Identities=17%  Similarity=0.198  Sum_probs=163.7

Q ss_pred             ccccceecccCceEEEEEEec----CCceEEEEEeecCC----CchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCeeE
Q 039276           34 FSESNLISRGGFGSIYKAKIQ----DGMEVVVKGFNLQY----GGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFKA  104 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~~----~~~~v~vK~~~~~~----~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~  104 (263)
                      |+..+.||+|++|.||++...    ++..+++|.+....    ....+.+.+|++++..+ +|++++++.+.+......+
T Consensus         2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~   81 (288)
T cd05583           2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLH   81 (288)
T ss_pred             ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEE
Confidence            777899999999999998742    46789999987532    23345677899999999 6999999999998888999


Q ss_pred             EEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-------------------
Q 039276          105 LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-------------------  165 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-------------------  165 (263)
                      +++||+++++|.+++.... .+++..+..++.|++.+|+|||+.+++|+||+|+||+.+.+                   
T Consensus        82 lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~  160 (288)
T cd05583          82 LILDYVNGGELFTHLYQRE-HFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEE  160 (288)
T ss_pred             EEEecCCCCcHHHHHhhcC-CcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECccccccccccc
Confidence            9999999999999987654 37888899999999999999999999999999999985432                   


Q ss_pred             -----ccccccccCc--------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccc
Q 039276          166 -----TLATISYMAP--------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLS  226 (263)
Q Consensus       166 -----~~g~~~y~aP--------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (263)
                           ..|+..|++|              ||||||++++||++|..||...... .....+...             ...
T Consensus       161 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~-~~~~~~~~~-------------~~~  226 (288)
T cd05583         161 ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQ-NSQSEISRR-------------ILK  226 (288)
T ss_pred             cccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCccc-chHHHHHHH-------------HHc
Confidence                 1356778888              9999999999999999998532110 011111100             000


Q ss_pred             cccccccchHHHHHHHHHhhccccccCcCCCCCccC
Q 039276          227 REDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKE  262 (263)
Q Consensus       227 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~e  262 (263)
                      .   ..+.+..++..+.+++.+||+.+|++|||+.+
T Consensus       227 ~---~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~  259 (288)
T cd05583         227 S---KPPFPKTMSAEARDFIQKLLEKDPKKRLGANG  259 (288)
T ss_pred             c---CCCCCcccCHHHHHHHHHHhcCCHhhccCcch
Confidence            0   01123345667899999999999999999764

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.97  E-value=2e-31  Score=226.88  Aligned_cols=227  Identities=16%  Similarity=0.154  Sum_probs=161.1

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecC--CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCC------e
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQ--YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDD------F  102 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~------~  102 (263)
                      .+|...+.||+|++|.||+|.. .++..||+|.+...  .......+.+|+++++.++|+||+++++++....      .
T Consensus        15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   94 (342)
T cd07879          15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQD   94 (342)
T ss_pred             cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCce
Confidence            3588899999999999999994 56899999998653  2223456788999999999999999999886542      4


Q ss_pred             eEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------
Q 039276          103 KALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------  165 (263)
Q Consensus       103 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------  165 (263)
                      .++++|++.. +|..+..   ..+++..+..++.|++.||+|||.++++||||+|+||+.+..                 
T Consensus        95 ~~lv~e~~~~-~l~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~  170 (342)
T cd07879          95 FYLVMPYMQT-DLQKIMG---HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHADAE  170 (342)
T ss_pred             EEEEeccccc-CHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCCC
Confidence            5899999865 7776653   237888999999999999999999999999999999996532                 


Q ss_pred             ---ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcC--CCchhhhhhhc----
Q 039276          166 ---TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLL--PNSVMKVVSAN----  223 (263)
Q Consensus       166 ---~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~----  223 (263)
                         ..++..|+||             |||||||+++||++|+.||..... ...+...+....  .....+.....    
T Consensus       171 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (342)
T cd07879         171 MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY-LDQLTQILKVTGVPGPEFVQKLEDKAAKS  249 (342)
T ss_pred             CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHhcCCCCHHHHHHhcccchHH
Confidence               2356778999             999999999999999999864211 111111111000  00000000000    


Q ss_pred             ccc--ccccc---ccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          224 LLS--REDEH---FMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       224 ~~~--~~~~~---~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ...  ....+   .......+.++.+++.+||+.||++||+++++
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~  294 (342)
T cd07879         250 YIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEA  294 (342)
T ss_pred             HHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence            000  00000   00012345678999999999999999998764

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.97  E-value=5.7e-32  Score=234.65  Aligned_cols=212  Identities=20%  Similarity=0.327  Sum_probs=173.3

Q ss_pred             cccccccceecccCceEEEEEEecC----CceEEEEEeecCCCc-hHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEE
Q 039276           31 LFLFSESNLISRGGFGSIYKAKIQD----GMEVVVKGFNLQYGG-AFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKAL  105 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~~~----~~~v~vK~~~~~~~~-~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l  105 (263)
                      .+.....++||+|+||.|++|.|..    ...||||++...... ....|.+|+..+.+++|+|++++||...+ ....+
T Consensus       109 ee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mM  187 (1039)
T KOG0199|consen  109 EEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMM  187 (1039)
T ss_pred             HHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhH
Confidence            3567788899999999999999753    456899999877544 67789999999999999999999999988 56789


Q ss_pred             EEeccCCCCHhhhhhhC-CCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc------------------
Q 039276          106 ILECMPHGSLGKCLSTS-NYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT------------------  166 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~------------------  166 (263)
                      |+|.++.|+|-+.+... ...+.....-.++.||+.||+||..++.|||||-.+|+++.+..                  
T Consensus       188 V~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned  267 (1039)
T KOG0199|consen  188 VFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENED  267 (1039)
T ss_pred             HhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCCCc
Confidence            99999999999999873 33366777788999999999999999999999999999954321                  


Q ss_pred             --------cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhccc
Q 039276          167 --------LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLL  225 (263)
Q Consensus       167 --------~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (263)
                              ...+.|.||            |||+|||++|||+| |..||..- .+.             .+.+.+     
T Consensus       268 ~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~-~g~-------------qIL~~i-----  328 (1039)
T KOG0199|consen  268 MYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGC-RGI-------------QILKNI-----  328 (1039)
T ss_pred             ceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCC-CHH-------------HHHHhc-----
Confidence                    225558888            99999999999999 99997631 000             111111     


Q ss_pred             ccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          226 SREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       226 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                       +...+.+.+..|++++.+++.+||..+|++|||+.+|
T Consensus       329 -D~~erLpRPk~csedIY~imk~cWah~paDRptFsai  365 (1039)
T KOG0199|consen  329 -DAGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAI  365 (1039)
T ss_pred             -cccccCCCCCCChHHHHHHHHHhccCCccccccHHHH
Confidence             1344556788999999999999999999999998764

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.97  E-value=2.5e-31  Score=219.96  Aligned_cols=228  Identities=21%  Similarity=0.209  Sum_probs=166.2

Q ss_pred             ccccceecccCceEEEEEEe-cCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           34 FSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      |+..+.||+|++|.||+|.. .+++.+++|.+....  ....+.+..|+++++.++|+|++++.+++.+.+..++++|++
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~   80 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC   80 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence            45677899999999999994 458999999998753  334566778999999999999999999999989999999999


Q ss_pred             CCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc-----------------------c
Q 039276          111 PHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT-----------------------L  167 (263)
Q Consensus       111 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~-----------------------~  167 (263)
                      ++ +|.+++......+++..+..++.|++.||+|||+.+++|+||+|+||+.....                       .
T Consensus        81 ~~-~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~  159 (282)
T cd07829          81 DM-DLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHEV  159 (282)
T ss_pred             Cc-CHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCccccCccc
Confidence            75 99999987644589999999999999999999999999999999999954321                       2


Q ss_pred             ccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcC---CCchhhhhhhc----cccc
Q 039276          168 ATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLL---PNSVMKVVSAN----LLSR  227 (263)
Q Consensus       168 g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~----~~~~  227 (263)
                      ++..|+||             |||||||+++|+++|+.||...... ..+........   +.......+..    ..+.
T Consensus       160 ~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (282)
T cd07829         160 VTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEI-DQLFKIFQILGTPTEESWPGVTKLPDYKPTFPK  238 (282)
T ss_pred             cCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHH-HHHHHHHHHhCCCcHHHHHhhcccccccccccc
Confidence            24558888             9999999999999999998542110 11111111000   00000000000    0000


Q ss_pred             cccc--ccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          228 EDEH--FMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       228 ~~~~--~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ....  .......+..+.+++.+||..+|++||++++|
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~  276 (282)
T cd07829         239 FPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEA  276 (282)
T ss_pred             cCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHH
Confidence            0000  00012336679999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.97  E-value=5.5e-31  Score=223.31  Aligned_cols=228  Identities=17%  Similarity=0.156  Sum_probs=160.5

Q ss_pred             cccccceecccCceEEEEEEec-C--CceEEEEEeecCC--CchHHHHHHHHHHHhhc-CCCcceeEeeEeec----CCe
Q 039276           33 LFSESNLISRGGFGSIYKAKIQ-D--GMEVVVKGFNLQY--GGAFKNLDVECNMMKII-RHQNLIKIISSCSK----DDF  102 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~~-~--~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~----~~~  102 (263)
                      +|+..+.||+|+||.||++... .  +..+|+|.+....  ....+.+.+|+++++.+ +|+||+++++....    ...
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~   80 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE   80 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence            3778889999999999999943 4  7789999986532  22355677899999998 59999999986532    245


Q ss_pred             eEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------
Q 039276          103 KALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------  165 (263)
Q Consensus       103 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------  165 (263)
                      .++++|++. ++|.+++..... +++..+..++.|++.||+|||+.+++|+||||+||+.+..                 
T Consensus        81 ~~~~~e~~~-~~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~  158 (332)
T cd07857          81 LYLYEELME-ADLHQIIRSGQP-LTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSEN  158 (332)
T ss_pred             EEEEEeccc-CCHHHHHhcCCC-CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceecccc
Confidence            788899886 599998875544 8899999999999999999999999999999999985321                 


Q ss_pred             ----------ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCC---chhhh
Q 039276          166 ----------TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPN---SVMKV  219 (263)
Q Consensus       166 ----------~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~---~~~~~  219 (263)
                                ..|+..|+||             |||||||++++|++|+.||..... ...+..........   ....+
T Consensus       159 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~  237 (332)
T cd07857         159 PGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDY-VDQLNQILQVLGTPDEETLSRI  237 (332)
T ss_pred             cccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCH-HHHHHHHHHHhCCCCHHHHHhh
Confidence                      1467789999             999999999999999999864211 01111111110000   00000


Q ss_pred             hhh-------ccccccccc-ccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          220 VSA-------NLLSREDEH-FMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       220 ~~~-------~~~~~~~~~-~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ...       ......... ......++..+.+++.+|++.+|++|||+.++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~l  289 (332)
T cd07857         238 GSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEA  289 (332)
T ss_pred             hhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHH
Confidence            000       000000000 00112346679999999999999999998764

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.97  E-value=2.1e-31  Score=197.13  Aligned_cols=228  Identities=20%  Similarity=0.196  Sum_probs=172.8

Q ss_pred             cccccceecccCceEEEEEE-ecCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           33 LFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      .|...++||+|.+|+||+|+ +.++.-||+|.+...+  .+......+||.+++.++|.||+++++.....+...+|+|+
T Consensus         3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~   82 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF   82 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence            37888999999999999999 6678889999998763  34466778999999999999999999999999999999999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc-----------------------
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT-----------------------  166 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~-----------------------  166 (263)
                      |.. +|.++..+-++.++.+....++.|++.||.|+|++++.|||+||+|.+++.++                       
T Consensus        83 cdq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgipvrcysae  161 (292)
T KOG0662|consen   83 CDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAE  161 (292)
T ss_pred             hhH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCceEeeece
Confidence            966 99999988777789999999999999999999999999999999999966543                       


Q ss_pred             cccccccCc-------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccc
Q 039276          167 LATISYMAP-------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHF  232 (263)
Q Consensus       167 ~g~~~y~aP-------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (263)
                      +.|..|++|             |+||.||++.|+.. |++.|..... ++.+..............+-+....+.....+
T Consensus       162 vvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dv-ddqlkrif~~lg~p~ed~wps~t~lpdyk~yp  240 (292)
T KOG0662|consen  162 VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV-DDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYP  240 (292)
T ss_pred             eeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcH-HHHHHHHHHHhCCCccccCCccccCCCCcccC
Confidence            347778998             99999999999998 6666653221 22233333333222222222221111111110


Q ss_pred             c-----ch----HHHHHHHHHhhccccccCcCCCCCccC
Q 039276          233 M-----TK----EQCMSFVFNLAMECTVESPNQRINAKE  262 (263)
Q Consensus       233 ~-----~~----~~~~~~l~~l~~~cl~~~p~~Rpt~~e  262 (263)
                      .     ..    +.....-++++.+.+.-+|.+|+++++
T Consensus       241 ~ypattswsqivp~lns~grdllqkll~cnp~qrisaea  279 (292)
T KOG0662|consen  241 IYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEA  279 (292)
T ss_pred             CccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHH
Confidence            0     01    233344589999999999999999864

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.97  E-value=4.1e-31  Score=225.23  Aligned_cols=228  Identities=19%  Similarity=0.217  Sum_probs=161.8

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecC------Ce
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKD------DF  102 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~------~~  102 (263)
                      .+|...+.||+|+||.||++. ..++..||+|++....  ......+.+|+++++.++|+||+++++.+...      ..
T Consensus        17 ~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   96 (345)
T cd07877          17 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND   96 (345)
T ss_pred             CceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeeccccccccc
Confidence            459999999999999999998 4568899999987532  22345677899999999999999999987543      34


Q ss_pred             eEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------
Q 039276          103 KALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------  165 (263)
Q Consensus       103 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------  165 (263)
                      .+++++++ +++|.+++...  .+++..+..++.|++.||+|||+++++|+||+|+||+....                 
T Consensus        97 ~~lv~~~~-~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~~  173 (345)
T cd07877          97 VYLVTHLM-GADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE  173 (345)
T ss_pred             EEEEehhc-ccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEeccccccccccc
Confidence            67888876 67998887653  37889999999999999999999999999999999995432                 


Q ss_pred             ---ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcC--CCchhh--------h
Q 039276          166 ---TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLL--PNSVMK--------V  219 (263)
Q Consensus       166 ---~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~--~~~~~~--------~  219 (263)
                         ..++..|+||             |||||||+++||++|+.||..... ...+........  ......        .
T Consensus       174 ~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (345)
T cd07877         174 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH-IDQLKLILRLVGTPGAELLKKISSESARN  252 (345)
T ss_pred             ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHHHhhcccHhHHH
Confidence               2457778888             999999999999999999853211 111111111000  000000        0


Q ss_pred             hhhcccccccccc-cchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          220 VSANLLSREDEHF-MTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       220 ~~~~~~~~~~~~~-~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ............+ ......++++.+++.+|++.+|.+|||+.++
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~  297 (345)
T cd07877         253 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQA  297 (345)
T ss_pred             HHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHH
Confidence            0000000000000 0011245678999999999999999998764

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.97  E-value=7.1e-31  Score=219.03  Aligned_cols=216  Identities=17%  Similarity=0.197  Sum_probs=149.2

Q ss_pred             cccccceecccCceEEEEEEecC----CceEEEEEeecCCCchHH-----------HHHHHHHHHhhcCCCcceeEeeEe
Q 039276           33 LFSESNLISRGGFGSIYKAKIQD----GMEVVVKGFNLQYGGAFK-----------NLDVECNMMKIIRHQNLIKIISSC   97 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~~~----~~~v~vK~~~~~~~~~~~-----------~~~~e~~~l~~~~h~~i~~~~~~~   97 (263)
                      +|...+.||+|+||.||+|...+    +..+++|...........           ....+...+..++|++++++++.+
T Consensus        13 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~   92 (294)
T PHA02882         13 EWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGCG   92 (294)
T ss_pred             ceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEee
Confidence            49999999999999999998543    445666654433211111           111233445667899999999876


Q ss_pred             ecCC----eeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc---------
Q 039276           98 SKDD----FKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI---------  164 (263)
Q Consensus        98 ~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~---------  164 (263)
                      ....    ..++++|++.. ++.+.+.... ..++..+..++.|++.||+|||+++++||||||+||+.+.         
T Consensus        93 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~DF  170 (294)
T PHA02882         93 SFKRCRMYYRFILLEKLVE-NTKEIFKRIK-CKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYIIDY  170 (294)
T ss_pred             eEecCCceEEEEEEehhcc-CHHHHHHhhc-cCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEEEc
Confidence            5432    45788887754 6766665433 2577888999999999999999999999999999999431         


Q ss_pred             ---------------------cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhc
Q 039276          165 ---------------------QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDL  211 (263)
Q Consensus       165 ---------------------~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~  211 (263)
                                           ...||+.|+||            |||||||+++||++|+.||.................
T Consensus       171 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~  250 (294)
T PHA02882        171 GIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDF  250 (294)
T ss_pred             CCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHH
Confidence                                 12478889999            999999999999999999975422221111100000


Q ss_pred             CCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          212 LPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                          ...+.....         ....+++++.+++..|++.+|++||++.+|
T Consensus       251 ----~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l  289 (294)
T PHA02882        251 ----IKRLHEGKI---------KIKNANKFIYDFIECVTKLSYEEKPDYDAL  289 (294)
T ss_pred             ----HHHhhhhhh---------ccCCCCHHHHHHHHHHHhCCCCCCCCHHHH
Confidence                000000000         122346779999999999999999999864

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.97  E-value=5.8e-32  Score=228.43  Aligned_cols=207  Identities=19%  Similarity=0.284  Sum_probs=167.9

Q ss_pred             ccceecccCceEEEEEE-ecCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccCC
Q 039276           36 ESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPH  112 (263)
Q Consensus        36 ~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~  112 (263)
                      -.+.||+|-||.||-|. ..+|+.||||++.+..  .+....+.+|+++|+.+.||+||.+..-|++.+..|+|||-+.|
T Consensus       568 ~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G  647 (888)
T KOG4236|consen  568 ADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG  647 (888)
T ss_pred             hHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc
Confidence            35789999999999998 6679999999997653  33446788999999999999999999999999999999999977


Q ss_pred             CCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-------------------------ccc
Q 039276          113 GSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-------------------------QTL  167 (263)
Q Consensus       113 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-------------------------~~~  167 (263)
                      .=|.-.+....+.+++...+.++.||+.||.|||+++|+|+||||+|||+.+                         ..+
T Consensus       648 DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrsVV  727 (888)
T KOG4236|consen  648 DMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRSVV  727 (888)
T ss_pred             hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhhhhhhc
Confidence            5555566666666999888999999999999999999999999999999433                         347


Q ss_pred             ccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhh-cccccccccccc
Q 039276          168 ATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSA-NLLSREDEHFMT  234 (263)
Q Consensus       168 g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  234 (263)
                      ||+.|+||            |+||.|||+|--++|..||..    ++.+.+.+           ... -+++..     -
T Consensus       728 GTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNE----dEdIndQI-----------QNAaFMyPp~-----P  787 (888)
T KOG4236|consen  728 GTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNE----DEDINDQI-----------QNAAFMYPPN-----P  787 (888)
T ss_pred             CCccccCHHHHhhccccccccceeeeEEEEEEecccccCCC----ccchhHHh-----------hccccccCCC-----c
Confidence            99999999            999999999999999999853    22221111           000 112221     2


Q ss_pred             hHHHHHHHHHhhccccccCcCCCCCccC
Q 039276          235 KEQCMSFVFNLAMECTVESPNQRINAKE  262 (263)
Q Consensus       235 ~~~~~~~l~~l~~~cl~~~p~~Rpt~~e  262 (263)
                      ..++++++.+||..+|+..-.+|.|.++
T Consensus       788 W~eis~~AidlIn~LLqVkm~kRysvdk  815 (888)
T KOG4236|consen  788 WSEISPEAIDLINNLLQVKMRKRYSVDK  815 (888)
T ss_pred             hhhcCHHHHHHHHHHHHHHHHHhcchHh
Confidence            4678888999999999999999988653

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=2.1e-31  Score=237.00  Aligned_cols=231  Identities=16%  Similarity=0.157  Sum_probs=153.1

Q ss_pred             ccccccceecccCceEEEEEEecC--CceEEEEEe--------------ec---CCCchHHHHHHHHHHHhhcCCCccee
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQD--GMEVVVKGF--------------NL---QYGGAFKNLDVECNMMKIIRHQNLIK   92 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~--~~~v~vK~~--------------~~---~~~~~~~~~~~e~~~l~~~~h~~i~~   92 (263)
                      .+|+..+.||+|+||+||++....  +...+.|.+              ..   ........+.+|+.+++.++|+||++
T Consensus       148 ~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv~  227 (501)
T PHA03210        148 AHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENILK  227 (501)
T ss_pred             hccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcCc
Confidence            469999999999999999987431  222222211              00   11123456778999999999999999


Q ss_pred             EeeEeecCCeeEEEEeccCCCCHhhhhhhCCC----cccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc---
Q 039276           93 IISSCSKDDFKALILECMPHGSLGKCLSTSNY----ILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ---  165 (263)
Q Consensus        93 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~---  165 (263)
                      +++++.+....|+++|++.+ +|..++.....    ......+..++.|++.||+|||+++|+||||||+||+++..   
T Consensus       228 l~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~~v  306 (501)
T PHA03210        228 IEEILRSEANTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGKI  306 (501)
T ss_pred             EeEEEEECCeeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCE
Confidence            99999999999999999854 77777654321    13355677899999999999999999999999999995321   


Q ss_pred             ---------------------ccccccccCc------------chhhHHHHHHHHHhCCCC-CccccC-CCchhhhHhhh
Q 039276          166 ---------------------TLATISYMAP------------DTYNFGIMIMETFSGKKP-TIKFFH-GEMTLKHWVND  210 (263)
Q Consensus       166 ---------------------~~g~~~y~aP------------Dv~SlG~il~ell~g~~P-f~~~~~-~~~~~~~~~~~  210 (263)
                                           ..|+..|+||            |||||||++|||++|..+ +..... ....+.+.+..
T Consensus       307 kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~  386 (501)
T PHA03210        307 VLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDS  386 (501)
T ss_pred             EEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHh
Confidence                                 2578999999            999999999999998764 332111 11111111111


Q ss_pred             cC------CCc---hhhhhhhccccccccc---ccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          211 LL------PNS---VMKVVSANLLSREDEH---FMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       211 ~~------~~~---~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ..      +..   ....+...........   ......++.++.+++.+||+.||++|||+.|+
T Consensus       387 ~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~el  451 (501)
T PHA03210        387 LSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAEL  451 (501)
T ss_pred             cccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHH
Confidence            10      000   0011110000000000   00011234567888999999999999999874

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.97  E-value=6.3e-31  Score=213.82  Aligned_cols=199  Identities=20%  Similarity=0.263  Sum_probs=160.3

Q ss_pred             ecccCceEEEEEEec-CCceEEEEEeecCCC---chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccCCCCH
Q 039276           40 ISRGGFGSIYKAKIQ-DGMEVVVKGFNLQYG---GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSL  115 (263)
Q Consensus        40 lg~g~~g~v~~~~~~-~~~~v~vK~~~~~~~---~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L  115 (263)
                      ||+|++|.||++... +++.+++|.+.....   .....+..|+.+++.++|+|++++++.+......+++||++++++|
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   80 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL   80 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence            689999999999954 588999999876532   2445678899999999999999999999999999999999999999


Q ss_pred             hhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------ccccccc
Q 039276          116 GKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------TLATISY  172 (263)
Q Consensus       116 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------~~g~~~y  172 (263)
                      .+++..... +++..+..++.|++.||.|||+.+++|+||+|+||+....                       ..++..|
T Consensus        81 ~~~l~~~~~-l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~  159 (250)
T cd05123          81 FSHLSKEGR-FSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEY  159 (250)
T ss_pred             HHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCccc
Confidence            999976543 7899999999999999999999999999999999995432                       2356678


Q ss_pred             cCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHHHHH
Q 039276          173 MAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMS  240 (263)
Q Consensus       173 ~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (263)
                      ++|            |+||||++++++++|+.||..... ......            ...        ...+.+...+.
T Consensus       160 ~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~-~~~~~~------------~~~--------~~~~~~~~~~~  218 (250)
T cd05123         160 LAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR-KEIYEK------------ILK--------DPLRFPEFLSP  218 (250)
T ss_pred             cChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-HHHHHH------------Hhc--------CCCCCCCCCCH
Confidence            888            999999999999999999864311 000000            000        01122334466


Q ss_pred             HHHHhhccccccCcCCCCCc
Q 039276          241 FVFNLAMECTVESPNQRINA  260 (263)
Q Consensus       241 ~l~~l~~~cl~~~p~~Rpt~  260 (263)
                      .+.+++.+||..||++|||+
T Consensus       219 ~l~~~i~~~l~~~p~~R~~~  238 (250)
T cd05123         219 EARDLISGLLQKDPTKRLGS  238 (250)
T ss_pred             HHHHHHHHHhcCCHhhCCCc
Confidence            78999999999999999998

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=6.6e-31  Score=217.74  Aligned_cols=213  Identities=23%  Similarity=0.364  Sum_probs=170.7

Q ss_pred             cccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHh--hcCCCcceeEeeEeecC----CeeEEE
Q 039276           33 LFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMK--IIRHQNLIKIISSCSKD----DFKALI  106 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~--~~~h~~i~~~~~~~~~~----~~~~lv  106 (263)
                      .....+.+|+|.||.||+|.|. |..||||+|...+   -..+.+|.++.+  +++|.||+.+++.-..+    -++++|
T Consensus       212 qI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~srd---E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLv  287 (513)
T KOG2052|consen  212 QIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSRD---ERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLV  287 (513)
T ss_pred             eeEEEEEecCccccceeecccc-CCceEEEEecccc---hhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEe
Confidence            3777889999999999999999 9999999998763   245566666554  56999999998876433    268999


Q ss_pred             EeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhc--------cCCccccccCCCcccccc--------------
Q 039276          107 LECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLH--------FGHSTHLLLKEDQSLTQI--------------  164 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH--------~~~i~h~dlk~~nil~~~--------------  164 (263)
                      ++|.+.|+|.+|+....  ++.....+++..++.||++||        .-.|.|||||..||+.+.              
T Consensus       288 TdYHe~GSL~DyL~r~t--v~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~  365 (513)
T KOG2052|consen  288 TDYHEHGSLYDYLNRNT--VTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR  365 (513)
T ss_pred             eecccCCcHHHHHhhcc--CCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEE
Confidence            99999999999998744  788888999999999999999        235899999999999443              


Q ss_pred             -------------cccccccccCc------------------chhhHHHHHHHHHhC----------CCCCccccCCCch
Q 039276          165 -------------QTLATISYMAP------------------DTYNFGIMIMETFSG----------KKPTIKFFHGEMT  203 (263)
Q Consensus       165 -------------~~~g~~~y~aP------------------Dv~SlG~il~ell~g----------~~Pf~~~~~~~~~  203 (263)
                                   ..+||..||||                  ||||||.++||+.-+          +.||.+.-..+.+
T Consensus       366 h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs  445 (513)
T KOG2052|consen  366 HDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPS  445 (513)
T ss_pred             ecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCC
Confidence                         24789999999                  999999999998843          3488777677777


Q ss_pred             hhhHhhhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCc
Q 039276          204 LKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINA  260 (263)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~  260 (263)
                      ++++....-..+....++..+.         ...+...+.++|+.||..||.-|.|+
T Consensus       446 ~eeMrkVVCv~~~RP~ipnrW~---------s~~~l~~m~klMkeCW~~Np~aRltA  493 (513)
T KOG2052|consen  446 FEEMRKVVCVQKLRPNIPNRWK---------SDPALRVMAKLMKECWYANPAARLTA  493 (513)
T ss_pred             HHHHhcceeecccCCCCCcccc---------cCHHHHHHHHHHHHhhcCCchhhhHH
Confidence            7777665555555444444332         34556678999999999999999886

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=3.9e-32  Score=245.98  Aligned_cols=209  Identities=18%  Similarity=0.226  Sum_probs=173.7

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecC---CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQ---YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      ++|+..+.||+|+||.|.+.+ .++++.||+|++++.   ...+..-|..|=.++...+.+=|+.+.-.|++..++|+||
T Consensus        75 ~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlVM  154 (1317)
T KOG0612|consen   75 EDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLVM  154 (1317)
T ss_pred             HhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEEE
Confidence            679999999999999999999 667888999999874   3455666777888888888899999999999999999999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-----------------------
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-----------------------  164 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-----------------------  164 (263)
                      ||++||+|-.++.... .+++..+..++..|+.||.-||..|+|||||||+|||++.                       
T Consensus       155 dY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~V~s  233 (1317)
T KOG0612|consen  155 DYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGTVRS  233 (1317)
T ss_pred             ecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcCCCCcEEe
Confidence            9999999999998877 5899999999999999999999999999999999999443                       


Q ss_pred             -cccccccccCc-----------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccc
Q 039276          165 -QTLATISYMAP-----------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLS  226 (263)
Q Consensus       165 -~~~g~~~y~aP-----------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (263)
                       ..+|||-|+||                 |.||+||++|||+.|..||..                 +.+..-..+.+..
T Consensus       234 ~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYa-----------------dslveTY~KIm~h  296 (1317)
T KOG0612|consen  234 SVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYA-----------------DSLVETYGKIMNH  296 (1317)
T ss_pred             ccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchH-----------------HHHHHHHHHHhch
Confidence             34799999999                 999999999999999999852                 1122222333333


Q ss_pred             cccccccchHHHHHHHHHhhccccccCcCCCCC
Q 039276          227 REDEHFMTKEQCMSFVFNLAMECTVESPNQRIN  259 (263)
Q Consensus       227 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt  259 (263)
                      ...-.+|....+|+++.+||.+.+. +|+.|..
T Consensus       297 k~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLg  328 (1317)
T KOG0612|consen  297 KESLSFPDETDVSEEAKDLIEALLC-DREVRLG  328 (1317)
T ss_pred             hhhcCCCcccccCHHHHHHHHHHhc-Chhhhcc
Confidence            4444445456689999999988876 6777765

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.97  E-value=7.8e-31  Score=212.12  Aligned_cols=188  Identities=16%  Similarity=0.107  Sum_probs=148.2

Q ss_pred             cCceEEEEEE-ecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccCCCCHhhhhhh
Q 039276           43 GGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCLST  121 (263)
Q Consensus        43 g~~g~v~~~~-~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  121 (263)
                      |.+|.||++. ..+++.+|+|.+.....     ...|...+....|||++++++++.+....+++|||+++++|.+++..
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~-----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   78 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSSE-----YSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK   78 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchhh-----hhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence            8899999999 45689999999976531     22344455556799999999999999999999999999999999876


Q ss_pred             CCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc--------------------cccccccCc------
Q 039276          122 SNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT--------------------LATISYMAP------  175 (263)
Q Consensus       122 ~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~--------------------~g~~~y~aP------  175 (263)
                      ... +++..+..++.|++.||+|||+++++|+||||+||+.+...                    .++..|+||      
T Consensus        79 ~~~-l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE~~~~~  157 (237)
T cd05576          79 FLN-IPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYCAPEVGGIS  157 (237)
T ss_pred             hcC-CCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccccCCcccCCC
Confidence            544 88999999999999999999999999999999999955321                    234568888      


Q ss_pred             ------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccc
Q 039276          176 ------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMEC  249 (263)
Q Consensus       176 ------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c  249 (263)
                            ||||+||+++||++|+.|+........               .          ......+..+++.+.+++.+|
T Consensus       158 ~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~---------------~----------~~~~~~~~~~~~~~~~li~~~  212 (237)
T cd05576         158 EETEACDWWSLGAILFELLTGKTLVECHPSGIN---------------T----------HTTLNIPEWVSEEARSLLQQL  212 (237)
T ss_pred             CCCchhhHHHHHHHHHHHHHCcchhhcCchhcc---------------c----------ccccCCcccCCHHHHHHHHHH
Confidence                  999999999999999988653211000               0          000012334566799999999


Q ss_pred             cccCcCCCCCcc
Q 039276          250 TVESPNQRINAK  261 (263)
Q Consensus       250 l~~~p~~Rpt~~  261 (263)
                      ++.||++|||+.
T Consensus       213 l~~dp~~R~~~~  224 (237)
T cd05576         213 LQFNPTERLGAG  224 (237)
T ss_pred             ccCCHHHhcCCC
Confidence            999999999974

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.97  E-value=2.3e-31  Score=203.63  Aligned_cols=225  Identities=16%  Similarity=0.204  Sum_probs=170.4

Q ss_pred             cccccccceecccCceEEEEEE-ecCCceEEEEEeecCCCchHHHHHHHHHHHhhcC-CCcceeEeeEeecC--CeeEEE
Q 039276           31 LFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIR-HQNLIKIISSCSKD--DFKALI  106 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~--~~~~lv  106 (263)
                      .++|+..+++|+|.++.||.|. ..+..+++||.++..   -.+.+.+|+.++..+. ||||+++++...+.  ..+.++
T Consensus        37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLi  113 (338)
T KOG0668|consen   37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLI  113 (338)
T ss_pred             cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhH
Confidence            3679999999999999999998 677899999999866   3467788999999995 99999999998764  567899


Q ss_pred             EeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc--------------------
Q 039276          107 LECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT--------------------  166 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~--------------------  166 (263)
                      +|++.+.+...+...    ++...+..++.++++||.|||++||.|||+||+|++++-..                    
T Consensus       114 FE~v~n~Dfk~ly~t----l~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eY  189 (338)
T KOG0668|consen  114 FEYVNNTDFKQLYPT----LTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY  189 (338)
T ss_pred             hhhhccccHHHHhhh----hchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcCCCcee
Confidence            999998777765543    67778899999999999999999999999999999954321                    


Q ss_pred             ---cccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCc---------------
Q 039276          167 ---LATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNS---------------  215 (263)
Q Consensus       167 ---~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~---------------  215 (263)
                         +.+..|--|             |+|||||.+..|++.+.||.......+.+..........+               
T Consensus       190 nVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~  269 (338)
T KOG0668|consen  190 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQ  269 (338)
T ss_pred             eeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChh
Confidence               233344444             9999999999999999999765444444444333333332               


Q ss_pred             hhhhhhhcccccccccc--cchHHHHHHHHHhhccccccCcCCCCCccC
Q 039276          216 VMKVVSANLLSREDEHF--MTKEQCMSFVFNLAMECTVESPNQRINAKE  262 (263)
Q Consensus       216 ~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~e  262 (263)
                      ...++.......+....  .....+++++.+++.+.|..|.++|+|+.|
T Consensus       270 ~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakE  318 (338)
T KOG0668|consen  270 FEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKE  318 (338)
T ss_pred             HhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHH
Confidence            22222222211111110  112345688999999999999999999976

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.97  E-value=1.7e-31  Score=217.57  Aligned_cols=229  Identities=18%  Similarity=0.203  Sum_probs=167.3

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCC------CcceeEeeEeecCCeeE
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRH------QNLIKIISSCSKDDFKA  104 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h------~~i~~~~~~~~~~~~~~  104 (263)
                      .+|....++|+|.||+|-.+- ...+..||+|+++.. ...+....-|+++++++.+      --++++.+||.-.++.|
T Consensus        89 ~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V-~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiC  167 (415)
T KOG0671|consen   89 NRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV-DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHIC  167 (415)
T ss_pred             cceehhhhhcCCcccceEEEeecCCCceehHHHHHHH-HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceE
Confidence            569999999999999999987 344788999998765 3455666779999999932      23678888898899999


Q ss_pred             EEEeccCCCCHhhhhhhCCCc-ccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-------------------
Q 039276          105 LILECMPHGSLGKCLSTSNYI-LDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-------------------  164 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-------------------  164 (263)
                      +|+|.+ |.++.+++..++.. ++...+..+..|++.+++|||+.+++|.||||+||+..+                   
T Consensus       168 ivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~  246 (415)
T KOG0671|consen  168 IVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPL  246 (415)
T ss_pred             EEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccceeccC
Confidence            999988 55999999986544 889999999999999999999999999999999999211                   


Q ss_pred             ---------------------cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhc
Q 039276          165 ---------------------QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDL  211 (263)
Q Consensus       165 ---------------------~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~  211 (263)
                                           ..+.|..|+||            ||||+||||+||++|...|..+.+.+ .++-+-...
T Consensus       247 ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~E-HLaMMerIl  325 (415)
T KOG0671|consen  247 KSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLE-HLAMMERIL  325 (415)
T ss_pred             CCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHH-HHHHHHHhh
Confidence                                 12458889999            99999999999999999998765322 121111111


Q ss_pred             C--CCchhhhh------hhc--------ccc--cc----c----ccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          212 L--PNSVMKVV------SAN--------LLS--RE----D----EHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       212 ~--~~~~~~~~------~~~--------~~~--~~----~----~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .  +.....-.      ...        ...  ..    +    ..+...+....++.+|+.+||..||.+|+|+.|.
T Consensus       326 Gp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EA  403 (415)
T KOG0671|consen  326 GPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREA  403 (415)
T ss_pred             CCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHH
Confidence            1  11110000      000        000  00    0    0011123445569999999999999999999873

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.97  E-value=3.2e-31  Score=241.61  Aligned_cols=213  Identities=20%  Similarity=0.287  Sum_probs=159.3

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecC-CCchHHHHHHHHHHHhhcCCCcceeEeeEeec----------
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQ-YGGAFKNLDVECNMMKIIRHQNLIKIISSCSK----------   99 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~----------   99 (263)
                      .+|+...+||+|+||.||+++ .-+|+.||||++... .......+.+|+.++++++|||||+++..+.+          
T Consensus       479 ~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ei  558 (1351)
T KOG1035|consen  479 NDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLEI  558 (1351)
T ss_pred             hhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccccc
Confidence            568999999999999999999 568999999999766 33445667889999999999999999876421          


Q ss_pred             ---------------------------------------------C----------------------------------
Q 039276          100 ---------------------------------------------D----------------------------------  100 (263)
Q Consensus       100 ---------------------------------------------~----------------------------------  100 (263)
                                                                   +                                  
T Consensus       559 ~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~  638 (1351)
T KOG1035|consen  559 VASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEG  638 (1351)
T ss_pred             cccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccCC
Confidence                                                         0                                  


Q ss_pred             ------------------------------CeeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCc
Q 039276          101 ------------------------------DFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHS  150 (263)
Q Consensus       101 ------------------------------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i  150 (263)
                                                    -.+||-||||+..++++++..+...-.....|+++.+|+.||+|+|++|+
T Consensus       639 ~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~gi  718 (1351)
T KOG1035|consen  639 SVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQGI  718 (1351)
T ss_pred             ccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCce
Confidence                                          02478899999988888887765432466789999999999999999999


Q ss_pred             cccccCCCcccccc-----------------------------------------cccccccccCc--------------
Q 039276          151 THLLLKEDQSLTQI-----------------------------------------QTLATISYMAP--------------  175 (263)
Q Consensus       151 ~h~dlk~~nil~~~-----------------------------------------~~~g~~~y~aP--------------  175 (263)
                      |||||||.||++++                                         ..+||..|.||              
T Consensus       719 IHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~K  798 (1351)
T KOG1035|consen  719 IHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSK  798 (1351)
T ss_pred             eeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccch
Confidence            99999999999322                                         34789999999              


Q ss_pred             -chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCc
Q 039276          176 -DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESP  254 (263)
Q Consensus       176 -Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p  254 (263)
                       |+||||+|++||+.   ||......-..+..+.....+.. ..               +...-.+.-..+|++|++.||
T Consensus       799 iDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~-~~---------------f~~~~~~~e~slI~~Ll~hdP  859 (1351)
T KOG1035|consen  799 IDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEP-AD---------------FFDPEHPEEASLIRWLLSHDP  859 (1351)
T ss_pred             hhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCC-cc---------------cccccchHHHHHHHHHhcCCC
Confidence             99999999999996   44322111111222211111111 00               111222235789999999999


Q ss_pred             CCCCCccCC
Q 039276          255 NQRINAKEM  263 (263)
Q Consensus       255 ~~Rpt~~ev  263 (263)
                      ++||||.|+
T Consensus       860 ~kRPtA~eL  868 (1351)
T KOG1035|consen  860 SKRPTATEL  868 (1351)
T ss_pred             ccCCCHHHH
Confidence            999999874

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1.1e-30  Score=225.28  Aligned_cols=205  Identities=19%  Similarity=0.207  Sum_probs=162.6

Q ss_pred             cccccccceecccCceEEEEEE-ecCCceEEEEEeecCCCchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCeeEEEEe
Q 039276           31 LFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      .+.|+....+|.|+|+.|-.+. ..+++..++|++.......    .+|+.++... +|+|++++.+.+.+....|+|||
T Consensus       321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~~----~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e  396 (612)
T KOG0603|consen  321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRADDN----QDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME  396 (612)
T ss_pred             chhhccccccCCCCccceeeeeccccccchhheecccccccc----ccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence            3568888889999999998888 5668899999998773222    2466555555 79999999999999999999999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccc-ccc--------------------c
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQ-IQT--------------------L  167 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~-~~~--------------------~  167 (263)
                      .+.++-+.+.+....  .....+.+|+.+|+.++.|||.+|++||||||+|||.. +.+                    .
T Consensus       397 ~l~g~ell~ri~~~~--~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~tp~  474 (612)
T KOG0603|consen  397 LLDGGELLRRIRSKP--EFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCDTPA  474 (612)
T ss_pred             hccccHHHHHHHhcc--hhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchhhcccc
Confidence            999987777665543  23367788999999999999999999999999999983 322                    2


Q ss_pred             ccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccch
Q 039276          168 ATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTK  235 (263)
Q Consensus       168 g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (263)
                      -|..|.||            |+||||++||+|++|+.||.....+....                ......      +..
T Consensus       475 ~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~----------------~~i~~~------~~s  532 (612)
T KOG0603|consen  475 LTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIH----------------TRIQMP------KFS  532 (612)
T ss_pred             hhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHH----------------HhhcCC------ccc
Confidence            26678888            99999999999999999998765551111                111111      123


Q ss_pred             HHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          236 EQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       236 ~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ..+|+++++|+..||+.||.+||++.++
T Consensus       533 ~~vS~~AKdLl~~LL~~dP~~Rl~~~~i  560 (612)
T KOG0603|consen  533 ECVSDEAKDLLQQLLQVDPALRLGADEI  560 (612)
T ss_pred             cccCHHHHHHHHHhccCChhhCcChhhh
Confidence            6788889999999999999999999875

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=6e-31  Score=210.79  Aligned_cols=206  Identities=18%  Similarity=0.217  Sum_probs=170.6

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCC---CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      ++|+..++||+|.||+|.+++ ..+++.+|+|++++..   ......-..|-++|+..+||.+..+.-.|+....+|+||
T Consensus       168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVM  247 (516)
T KOG0690|consen  168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVM  247 (516)
T ss_pred             chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEE
Confidence            579999999999999999999 6679999999998763   234445567889999999999999988899999999999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-----------------------
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-----------------------  164 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-----------------------  164 (263)
                      ||+.||.|.-.+.... .+++.....+..+|+.||.|||+++||.||+|.+|.+++.                       
T Consensus       248 eyanGGeLf~HLsrer-~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~t~k  326 (516)
T KOG0690|consen  248 EYANGGELFFHLSRER-VFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGDTTK  326 (516)
T ss_pred             EEccCceEeeehhhhh-cccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhcccccceec
Confidence            9999999998886644 4888888999999999999999999999999999999443                       


Q ss_pred             cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccc
Q 039276          165 QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHF  232 (263)
Q Consensus       165 ~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (263)
                      +..||+.|+||            |.|.+||++|||++|+.||....++              ....++-..       ..
T Consensus       327 TFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~--------------kLFeLIl~e-------d~  385 (516)
T KOG0690|consen  327 TFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHE--------------KLFELILME-------DL  385 (516)
T ss_pred             cccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchh--------------HHHHHHHhh-------hc
Confidence            44799999999            9999999999999999998753221              111111111       01


Q ss_pred             cchHHHHHHHHHhhccccccCcCCCCC
Q 039276          233 MTKEQCMSFVFNLAMECTVESPNQRIN  259 (263)
Q Consensus       233 ~~~~~~~~~l~~l~~~cl~~~p~~Rpt  259 (263)
                      .++..+++++..|+.-+|..||.+|..
T Consensus       386 kFPr~ls~eAktLLsGLL~kdP~kRLG  412 (516)
T KOG0690|consen  386 KFPRTLSPEAKTLLSGLLKKDPKKRLG  412 (516)
T ss_pred             cCCccCCHHHHHHHHHHhhcChHhhcC
Confidence            246677888999999999999999964

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.96  E-value=1.3e-30  Score=229.60  Aligned_cols=210  Identities=22%  Similarity=0.336  Sum_probs=171.4

Q ss_pred             cccccceecccCceEEEEEEe-cC----CceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEE
Q 039276           33 LFSESNLISRGGFGSIYKAKI-QD----GMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALI  106 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~-~~----~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv  106 (263)
                      .....++||+|+||+||+|.| ..    .-+|++|++.... .+..+++..|+-.+..++|+|++++++++..+. +.||
T Consensus       697 elkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlv  775 (1177)
T KOG1025|consen  697 ELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLV  775 (1177)
T ss_pred             hhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHH
Confidence            366788999999999999984 33    3468999997663 345788999999999999999999999997765 8999


Q ss_pred             EeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc------cc--------cccc
Q 039276          107 LECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT------LA--------TISY  172 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~------~g--------~~~y  172 (263)
                      ++|+|.|+|.++++.++..+.....+.|..||++||.|||++.++||||-.+|+|..+..      .|        ..+|
T Consensus       776 tq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey  855 (1177)
T KOG1025|consen  776 TQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEY  855 (1177)
T ss_pred             HHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCcccccc
Confidence            999999999999998887789999999999999999999999999999999999965422      11        2234


Q ss_pred             cCc-----------------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccc
Q 039276          173 MAP-----------------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSRE  228 (263)
Q Consensus       173 ~aP-----------------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (263)
                      .+|                       |||||||++||++| |..||+.....+              +.+++      +.
T Consensus       856 ~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~e--------------I~dll------e~  915 (1177)
T KOG1025|consen  856 SAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEE--------------IPDLL------EK  915 (1177)
T ss_pred             cccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHH--------------hhHHH------hc
Confidence            333                       99999999999999 999987542221              11111      22


Q ss_pred             cccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          229 DEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       229 ~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +.|.+.++.|+-++..++.+||-.|+..||+++++
T Consensus       916 geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel  950 (1177)
T KOG1025|consen  916 GERLSQPPICTIDVYMVMVKCWMIDADSRPTFKEL  950 (1177)
T ss_pred             cccCCCCCCccHHHHHHHHHHhccCcccCccHHHH
Confidence            33455688999999999999999999999999763

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.96  E-value=3.2e-29  Score=229.64  Aligned_cols=129  Identities=22%  Similarity=0.275  Sum_probs=114.5

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCCC---chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYG---GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~---~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      .+|...++||+|+||.||+|.. .+++.||+|++.....   .....+..|+.+++.++|+||+++++.+......|+||
T Consensus         4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm   83 (669)
T cd05610           4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM   83 (669)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence            4589999999999999999994 4689999999976432   23456778999999999999999999999889999999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccc
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSL  161 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil  161 (263)
                      ||+++++|.+++..... +++..++.++.||+.||.|||.++|+||||||+||+
T Consensus        84 Ey~~g~~L~~li~~~~~-l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NIL  136 (669)
T cd05610          84 EYLIGGDVKSLLHIYGY-FDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNML  136 (669)
T ss_pred             eCCCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEE
Confidence            99999999999976543 788889999999999999999999999999999987

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.96  E-value=2.8e-30  Score=205.63  Aligned_cols=231  Identities=20%  Similarity=0.214  Sum_probs=167.6

Q ss_pred             cccccccceecccCceEEEEEE-ecC----CceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeec-CCe
Q 039276           31 LFLFSESNLISRGGFGSIYKAK-IQD----GMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSK-DDF  102 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~-~~~----~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~  102 (263)
                      ...|+....||+|.+|.||+|. ..+    ...+|+|.++...  .+......+|+.+++.++|+|++.+..++.+ ...
T Consensus        23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~  102 (438)
T KOG0666|consen   23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKK  102 (438)
T ss_pred             HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCce
Confidence            3569999999999999999996 222    2368999997663  3446677889999999999999999999876 678


Q ss_pred             eEEEEeccCCCCHhhhhhhC----CCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-------------
Q 039276          103 KALILECMPHGSLGKCLSTS----NYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-------------  165 (263)
Q Consensus       103 ~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-------------  165 (263)
                      +++++||++. +|.+.++-.    .+.++....+.|++||+.|+.|||++=+.||||||.||+...+             
T Consensus       103 v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlG  181 (438)
T KOG0666|consen  103 VWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLG  181 (438)
T ss_pred             EEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeeccc
Confidence            9999999988 999988632    2348899999999999999999999999999999999995443             


Q ss_pred             -----------------ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCC---C-----chhhhH
Q 039276          166 -----------------TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHG---E-----MTLKHW  207 (263)
Q Consensus       166 -----------------~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~---~-----~~~~~~  207 (263)
                                       ++.|..|+||             ||||.|||+.||++-++.|......   .     +.+...
T Consensus       182 laR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rI  261 (438)
T KOG0666|consen  182 LARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRI  261 (438)
T ss_pred             HHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHH
Confidence                             2458889999             9999999999999998887542110   0     111222


Q ss_pred             hhhcCCCchhhhhhhccccccccc-----------------ccchHHHHHHHHHhhccccccCcCCCCCccC
Q 039276          208 VNDLLPNSVMKVVSANLLSREDEH-----------------FMTKEQCMSFVFNLAMECTVESPNQRINAKE  262 (263)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~e  262 (263)
                      ...........+-+...+++....                 +.....-++...+|+.++|+.||-+|+|+++
T Consensus       262 f~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~q  333 (438)
T KOG0666|consen  262 FEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQ  333 (438)
T ss_pred             HHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHH
Confidence            222222222121111111111000                 0000111334789999999999999999875

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.96  E-value=2.4e-29  Score=227.56  Aligned_cols=211  Identities=24%  Similarity=0.394  Sum_probs=170.8

Q ss_pred             ccccceecccCceEEEEEEec--------CCceEEEEEeecCC-CchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCee
Q 039276           34 FSESNLISRGGFGSIYKAKIQ--------DGMEVVVKGFNLQY-GGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFK  103 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~~--------~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~  103 (263)
                      ....+.+|.|.||+|++|...        ....||||.++... ....+.+..|+++++.+ .|+|++.++|.+...+..
T Consensus       298 l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~  377 (609)
T KOG0200|consen  298 LKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPL  377 (609)
T ss_pred             ccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCce
Confidence            355569999999999999732        14568999997653 34677788999999999 699999999999988899


Q ss_pred             EEEEeccCCCCHhhhhhhCC---------------CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc--
Q 039276          104 ALILECMPHGSLGKCLSTSN---------------YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT--  166 (263)
Q Consensus       104 ~lv~e~~~~~~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~--  166 (263)
                      +++.||+..|+|.++++...               ..+.......++.||+.|++||+++..+||||-.+||+...+.  
T Consensus       378 ~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~~~~  457 (609)
T KOG0200|consen  378 YVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITKNKVI  457 (609)
T ss_pred             EEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecCCCEE
Confidence            99999999999999998765               2377788999999999999999999999999999999943321  


Q ss_pred             ----------------------cc--cccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhh
Q 039276          167 ----------------------LA--TISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVN  209 (263)
Q Consensus       167 ----------------------~g--~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~  209 (263)
                                            .+  ...||||            ||||||++|||+++ |..||......         
T Consensus       458 kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~---------  528 (609)
T KOG0200|consen  458 KIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPT---------  528 (609)
T ss_pred             EEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcH---------
Confidence                                  11  3449999            99999999999999 99998642111         


Q ss_pred             hcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          210 DLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                             .++..   .-..+.+...|..|++++.++|+.||+.+|++||++.++
T Consensus       529 -------~~l~~---~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~  572 (609)
T KOG0200|consen  529 -------EELLE---FLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSEC  572 (609)
T ss_pred             -------HHHHH---HHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHH
Confidence                   11111   223455566788899999999999999999999998763

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.96  E-value=4e-30  Score=213.67  Aligned_cols=212  Identities=17%  Similarity=0.220  Sum_probs=169.0

Q ss_pred             cccccceecccCceEEEEEE-ecCCceEEEEEeecCC---CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEe
Q 039276           33 LFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      .|..-+.||+|+||.||-+. ..+|+.+|.|++.++.   ...-....+|-.++.+++.+.||.+--.+++...+++|+.
T Consensus       186 ~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVLt  265 (591)
T KOG0986|consen  186 TFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVLT  265 (591)
T ss_pred             ceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEEE
Confidence            37778899999999999998 5669999999986542   2223445678889999999999999888899999999999


Q ss_pred             ccCCCCHhhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc----------------------c
Q 039276          109 CMPHGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI----------------------Q  165 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~----------------------~  165 (263)
                      .|.||+|.-.+.+.+ ..+++..+..++++|+.||++||...||.||+||+|||++.                      .
T Consensus       266 lMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~~~~  345 (591)
T KOG0986|consen  266 LMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKPIRG  345 (591)
T ss_pred             eecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCCCCcccc
Confidence            999999988776543 34999999999999999999999999999999999999543                      3


Q ss_pred             ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccccc
Q 039276          166 TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFM  233 (263)
Q Consensus       166 ~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (263)
                      ++||.+||||            |.|||||++|||+-|+.||........              .+.++........   .
T Consensus       346 rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk--------------~eEvdrr~~~~~~---e  408 (591)
T KOG0986|consen  346 RVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVK--------------REEVDRRTLEDPE---E  408 (591)
T ss_pred             ccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhh--------------HHHHHHHHhcchh---h
Confidence            3899999999            999999999999999999975422111              1111111111111   1


Q ss_pred             chHHHHHHHHHhhccccccCcCCCCCcc
Q 039276          234 TKEQCMSFVFNLAMECTVESPNQRINAK  261 (263)
Q Consensus       234 ~~~~~~~~l~~l~~~cl~~~p~~Rpt~~  261 (263)
                      .+...++++.++....|+.||++|.-..
T Consensus       409 y~~kFS~eakslc~~LL~Kdp~~RLGcr  436 (591)
T KOG0986|consen  409 YSDKFSEEAKSLCEGLLTKDPEKRLGCR  436 (591)
T ss_pred             cccccCHHHHHHHHHHHccCHHHhccCC
Confidence            2467788899999999999999997543

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.96  E-value=1.1e-29  Score=199.15  Aligned_cols=214  Identities=15%  Similarity=0.174  Sum_probs=165.0

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecC-CCchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCeeEEEEe
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQ-YGGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~-~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      .+.+....||.|+.|.|++++ ..+|.-.|||..... ..++.+++...+.+..+- +.|.||+++|+|.....+++-||
T Consensus        92 ndl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMe  171 (391)
T KOG0983|consen   92 NDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICME  171 (391)
T ss_pred             HHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHH
Confidence            456777889999999999999 556888999998655 334677788888776666 48999999999999888999999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccC-CccccccCCCcccccc----------------------c
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFG-HSTHLLLKEDQSLTQI----------------------Q  165 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~h~dlk~~nil~~~----------------------~  165 (263)
                      .|.. -+..+++.-...+++.-+-++...+++||.||.++ +++|||+||+|||++.                      .
T Consensus       172 lMs~-C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAhtr  250 (391)
T KOG0983|consen  172 LMST-CAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHTR  250 (391)
T ss_pred             HHHH-HHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeeccccccc
Confidence            8854 56666666555688888889999999999999955 7999999999999543                      2


Q ss_pred             ccccccccCc---------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccc
Q 039276          166 TLATISYMAP---------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDE  230 (263)
Q Consensus       166 ~~g~~~y~aP---------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (263)
                      ..|-+.||||               ||||||+.++||.||..||..-   +..+..+         +++++     +++.
T Consensus       251 sAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c---~tdFe~l---------tkvln-----~ePP  313 (391)
T KOG0983|consen  251 SAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGC---KTDFEVL---------TKVLN-----EEPP  313 (391)
T ss_pred             ccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCC---CccHHHH---------HHHHh-----cCCC
Confidence            3577889999               9999999999999999998642   1111111         11111     1112


Q ss_pred             cccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          231 HFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       231 ~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ..+.....++++.+++..||+.|+.+||...++
T Consensus       314 ~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~L  346 (391)
T KOG0983|consen  314 LLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKL  346 (391)
T ss_pred             CCCcccCcCHHHHHHHHHHhhcCcccCcchHHH
Confidence            222233477889999999999999999987653

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.96  E-value=7.9e-30  Score=208.62  Aligned_cols=212  Identities=19%  Similarity=0.250  Sum_probs=168.1

Q ss_pred             ccccccceecccCceEEEEEEec------CCceEEEEEeecC-CCchHHHHHHHHHHHhhcCCCcceeEeeEee-cCCee
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ------DGMEVVVKGFNLQ-YGGAFKNLDVECNMMKIIRHQNLIKIISSCS-KDDFK  103 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~------~~~~v~vK~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-~~~~~  103 (263)
                      .+++...++.+|.||.||.|.|.      +.+.|.+|.++.. .+-....+..|...+..+.|||+..+.+++. +...+
T Consensus       284 ~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P  363 (563)
T KOG1024|consen  284 CRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATP  363 (563)
T ss_pred             hheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcc
Confidence            46777888899999999999643      3456677877655 3345667888999999999999999999884 56788


Q ss_pred             EEEEeccCCCCHhhhhhhC-------CCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc----------
Q 039276          104 ALILECMPHGSLGKCLSTS-------NYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT----------  166 (263)
Q Consensus       104 ~lv~e~~~~~~L~~~l~~~-------~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~----------  166 (263)
                      ++++.+..-|+|..|+...       .+.+.-.+...++.|++.|++|||.++++|.||-.+|.+++..-          
T Consensus       364 ~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkltDsaLS  443 (563)
T KOG1024|consen  364 FVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLTDSALS  443 (563)
T ss_pred             eEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEeccchhc
Confidence            9999999889999999821       12256667889999999999999999999999999998854321          


Q ss_pred             ---------------cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhh
Q 039276          167 ---------------LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMK  218 (263)
Q Consensus       167 ---------------~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~  218 (263)
                                     -.+..||+|            |||||||++|||+| |+.||.+...                   
T Consensus       444 RDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDP-------------------  504 (563)
T KOG1024|consen  444 RDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDP-------------------  504 (563)
T ss_pred             cccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCH-------------------
Confidence                           125568888            99999999999999 9999875311                   


Q ss_pred             hhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          219 VVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                       .....+-.++.|...|-+|++++..+|..||...|++||+++|+
T Consensus       505 -fEm~~ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Ql  548 (563)
T KOG1024|consen  505 -FEMEHYLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQL  548 (563)
T ss_pred             -HHHHHHHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHH
Confidence             11112223455556688999999999999999999999999874

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=3e-30  Score=214.30  Aligned_cols=215  Identities=23%  Similarity=0.302  Sum_probs=169.8

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecC-------CCchHHHHHHHHHHHhhcCCCcceeEeeEee-cCCe
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQ-------YGGAFKNLDVECNMMKIIRHQNLIKIISSCS-KDDF  102 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~-------~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-~~~~  102 (263)
                      ++|-.+.+||+|+|+.||++. ....+.||+|+-...       .....+...+|..+++.++||.||++++++. +...
T Consensus       463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtds  542 (775)
T KOG1151|consen  463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDS  542 (775)
T ss_pred             HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecccc
Confidence            579999999999999999998 566788888876432       1223455678999999999999999999995 5567


Q ss_pred             eEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccC--CccccccCCCccc-------------------
Q 039276          103 KALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFG--HSTHLLLKEDQSL-------------------  161 (263)
Q Consensus       103 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~i~h~dlk~~nil-------------------  161 (263)
                      +|-|+|||+|.+|.-|++.+.- +++..+..|+-||+.||.||...  .|+|-||||.|||                   
T Consensus       543 FCTVLEYceGNDLDFYLKQhkl-mSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSK  621 (775)
T KOG1151|consen  543 FCTVLEYCEGNDLDFYLKQHKL-MSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSK  621 (775)
T ss_pred             ceeeeeecCCCchhHHHHhhhh-hhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhh
Confidence            8999999999999999987655 88899999999999999999976  5999999999999                   


Q ss_pred             --------------ccccccccccccCc----------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhc
Q 039276          162 --------------TQIQTLATISYMAP----------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDL  211 (263)
Q Consensus       162 --------------~~~~~~g~~~y~aP----------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~  211 (263)
                                    +.+.+.||.+|++|                ||||+|||+|..+.|+.||.......+.+..     
T Consensus       622 IMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqe-----  696 (775)
T KOG1151|consen  622 IMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQE-----  696 (775)
T ss_pred             hccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhh-----
Confidence                          23355789999999                9999999999999999999754332222211     


Q ss_pred             CCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccC
Q 039276          212 LPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKE  262 (263)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~e  262 (263)
                        +.+.+        .-...+|..+.+++++.++|++||+..-++|....+
T Consensus       697 --NTIlk--------AtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~q  737 (775)
T KOG1151|consen  697 --NTILK--------ATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQ  737 (775)
T ss_pred             --hchhc--------ceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHH
Confidence              11111        111123344577888999999999999888876543

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.96  E-value=6e-29  Score=207.56  Aligned_cols=223  Identities=23%  Similarity=0.295  Sum_probs=161.6

Q ss_pred             ccccccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHh--hcCCCcceeEeeEeecCC----ee
Q 039276           30 GLFLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMK--IIRHQNLIKIISSCSKDD----FK  103 (263)
Q Consensus        30 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~--~~~h~~i~~~~~~~~~~~----~~  103 (263)
                      +.......+.+|+|+||.||+|... ++.||||++...   +.+.+.+|=.+.+  .++|+||+++++.-....    .+
T Consensus       208 ~l~pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~~---~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~ey  283 (534)
T KOG3653|consen  208 ELDPLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPEQ---EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEY  283 (534)
T ss_pred             cCCchhhHHHhhcCccceeehhhcc-CceeEEEecCHH---HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccce
Confidence            3455788899999999999999877 699999999866   4455665555444  558999999998875443    78


Q ss_pred             EEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhc---------cCCccccccCCCccccccc---------
Q 039276          104 ALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLH---------FGHSTHLLLKEDQSLTQIQ---------  165 (263)
Q Consensus       104 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH---------~~~i~h~dlk~~nil~~~~---------  165 (263)
                      ++|+||.+.|+|.+|+..+.  ++|....+++..|+.||+|||         ...|+|||||..|||...+         
T Consensus       284 wLVt~fh~kGsL~dyL~~nt--isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFG  361 (534)
T KOG3653|consen  284 WLVTEFHPKGSLCDYLKANT--ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFG  361 (534)
T ss_pred             eEEeeeccCCcHHHHHHhcc--ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccc
Confidence            99999999999999998765  799999999999999999999         4479999999999995442         


Q ss_pred             ----------------ccccccccCc------------------chhhHHHHHHHHHhCCCCCc--cccCCCchhhhHhh
Q 039276          166 ----------------TLATISYMAP------------------DTYNFGIMIMETFSGKKPTI--KFFHGEMTLKHWVN  209 (263)
Q Consensus       166 ----------------~~g~~~y~aP------------------Dv~SlG~il~ell~g~~Pf~--~~~~~~~~~~~~~~  209 (263)
                                      .+||..||||                  ||||+|.++||++++..-++  ...+-+..++.-+.
T Consensus       362 LAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG  441 (534)
T KOG3653|consen  362 LALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVG  441 (534)
T ss_pred             eeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhc
Confidence                            3789999999                  99999999999998766542  11222222322222


Q ss_pred             hcCCC-chhhhhhh-ccccc--ccccccchHHHHHHHHHhhccccccCcCCCCCcc
Q 039276          210 DLLPN-SVMKVVSA-NLLSR--EDEHFMTKEQCMSFVFNLAMECTVESPNQRINAK  261 (263)
Q Consensus       210 ~~~~~-~~~~~~~~-~~~~~--~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~  261 (263)
                      ....- +....+.. +..+.  +.++   ......-+.+.+..||..||+-|.|+.
T Consensus       442 ~hPt~e~mq~~VV~kK~RP~~p~~W~---~h~~~~~l~et~EeCWDhDaeARLTA~  494 (534)
T KOG3653|consen  442 NHPTLEEMQELVVRKKQRPKIPDAWR---KHAGMAVLCETIEECWDHDAEARLTAG  494 (534)
T ss_pred             CCCCHHHHHHHHHhhccCCCChhhhh---cCccHHHHHHHHHHHcCCchhhhhhhH
Confidence            11111 11111111 11111  0010   113344589999999999999999874

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.96  E-value=3.1e-28  Score=216.06  Aligned_cols=214  Identities=20%  Similarity=0.280  Sum_probs=174.2

Q ss_pred             cccccccceecccCceEEEEEE-ecCCceEEEEEeecCCCchHHHHHHHHHHHhhc-CCCcceeEeeEeec-----CCee
Q 039276           31 LFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKII-RHQNLIKIISSCSK-----DDFK  103 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~-----~~~~  103 (263)
                      ++.++..+.+|.|.+|+||+++ ..+++.+|+|+....... ..+...|.++++.. .|||++.+++++..     ++++
T Consensus        18 ~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~-deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqL   96 (953)
T KOG0587|consen   18 ADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDE-EEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQL   96 (953)
T ss_pred             CCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccc-cHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeE
Confidence            3558999999999999999999 667999999998876433 35666788888888 79999999999853     4689


Q ss_pred             EEEEeccCCCCHhhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc------------------
Q 039276          104 ALILECMPHGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI------------------  164 (263)
Q Consensus       104 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~------------------  164 (263)
                      ++|||||.+|+..++++... ..+.+..+..|+..++.|+.+||...++|||+|..|||+..                  
T Consensus        97 WLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT  176 (953)
T KOG0587|consen   97 WLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDST  176 (953)
T ss_pred             EEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeeeeecc
Confidence            99999999999999998643 33889999999999999999999999999999999999433                  


Q ss_pred             -----cccccccccCc-----------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhh
Q 039276          165 -----QTLATISYMAP-----------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSA  222 (263)
Q Consensus       165 -----~~~g~~~y~aP-----------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (263)
                           +..||+.||||                 |+||||++..||.-|.+|+.++-....              +-.+  
T Consensus       177 ~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmra--------------LF~I--  240 (953)
T KOG0587|consen  177 VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRA--------------LFLI--  240 (953)
T ss_pred             cccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhh--------------hccC--
Confidence                 34789999999                 999999999999999999765321111              1111  


Q ss_pred             cccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          223 NLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                        ...++.....+...++++.++|..||..|..+||++.++
T Consensus       241 --pRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~l  279 (953)
T KOG0587|consen  241 --PRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEEL  279 (953)
T ss_pred             --CCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhh
Confidence              112222333467889999999999999999999998764

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.96  E-value=3.8e-28  Score=195.78  Aligned_cols=202  Identities=23%  Similarity=0.265  Sum_probs=159.0

Q ss_pred             CceEEEEEEec-CCceEEEEEeecCCCch-HHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccCCCCHhhhhhh
Q 039276           44 GFGSIYKAKIQ-DGMEVVVKGFNLQYGGA-FKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCLST  121 (263)
Q Consensus        44 ~~g~v~~~~~~-~~~~v~vK~~~~~~~~~-~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  121 (263)
                      +||.||+|... ++..+++|.+....... .+.+.+|++.++.++|+|++++.+.+......++++|++++++|.+++..
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~   80 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK   80 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence            57899999965 48999999998764444 67888999999999999999999999888899999999999999999976


Q ss_pred             CCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc----------------------ccccccccCc----
Q 039276          122 SNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ----------------------TLATISYMAP----  175 (263)
Q Consensus       122 ~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~----------------------~~g~~~y~aP----  175 (263)
                      ... ++...++.++.+++.++.+||..+++|+|++|+||+....                      ..++..|++|    
T Consensus        81 ~~~-~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~~~  159 (244)
T smart00220       81 RGR-LSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAPEVLL  159 (244)
T ss_pred             ccC-CCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCCCHHHHc
Confidence            554 7888999999999999999999999999999999996532                      2356678888    


Q ss_pred             --------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhc
Q 039276          176 --------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAM  247 (263)
Q Consensus       176 --------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  247 (263)
                              ||||||++++++++|..||........... ...            ......    ......++.++.+++.
T Consensus       160 ~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~-~~~------------~~~~~~----~~~~~~~~~~~~~~i~  222 (244)
T smart00220      160 GKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFK-KIG------------KPKPPF----PPPEWKISPEAKDLIR  222 (244)
T ss_pred             cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHH-HHh------------ccCCCC----ccccccCCHHHHHHHH
Confidence                    999999999999999999864211111111 000            000000    0000115567999999


Q ss_pred             cccccCcCCCCCccCC
Q 039276          248 ECTVESPNQRINAKEM  263 (263)
Q Consensus       248 ~cl~~~p~~Rpt~~ev  263 (263)
                      +|+..+|++||++.++
T Consensus       223 ~~l~~~p~~Rp~~~~~  238 (244)
T smart00220      223 KLLVKDPEKRLTAEEA  238 (244)
T ss_pred             HHccCCchhccCHHHH
Confidence            9999999999998764

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.95  E-value=2.7e-29  Score=221.72  Aligned_cols=206  Identities=20%  Similarity=0.292  Sum_probs=158.0

Q ss_pred             cccccceecccCce-EEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCeeEEEEecc
Q 039276           33 LFSESNLISRGGFG-SIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        33 ~y~~~~~lg~g~~g-~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      .|...+.+|.|+.| .||+|..+ ++.||||.+-..   ......+||.+|+.- +||||+++++.-.+..+.||..|.|
T Consensus       510 ~~~~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~e---~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC  585 (903)
T KOG1027|consen  510 FFSPKEILGYGSNGTVVFRGVYE-GREVAVKRLLEE---FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC  585 (903)
T ss_pred             eeccHHHcccCCCCcEEEEEeeC-CceehHHHHhhH---hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh
Confidence            46777889999887 58999988 899999988654   344566799999888 6999999999999999999999999


Q ss_pred             CCCCHhhhhhhCCCc---ccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-----------------------
Q 039276          111 PHGSLGKCLSTSNYI---LDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-----------------------  164 (263)
Q Consensus       111 ~~~~L~~~l~~~~~~---~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-----------------------  164 (263)
                      .- +|.+++......   ......+.++.|+++||++||+.+||||||||+|||+..                       
T Consensus       586 ~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~  664 (903)
T KOG1027|consen  586 AC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGG  664 (903)
T ss_pred             hh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCC
Confidence            65 999999874111   111234678899999999999999999999999999433                       


Q ss_pred             --------cccccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhc
Q 039276          165 --------QTLATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSAN  223 (263)
Q Consensus       165 --------~~~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (263)
                              ...||-+|+||            ||||+||++|+.++ |..||.+....+..+-   .....  ...     
T Consensus       665 ~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl---~~~~~--L~~-----  734 (903)
T KOG1027|consen  665 KSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANIL---TGNYT--LVH-----  734 (903)
T ss_pred             cchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhh---cCccc--eee-----
Confidence                    23689999999            99999999999999 5999976533322110   00000  000     


Q ss_pred             ccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          224 LLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +.        ....+  ++.+||.+|+.++|..||+|.+|
T Consensus       735 L~--------~~~d~--eA~dLI~~ml~~dP~~RPsa~~V  764 (903)
T KOG1027|consen  735 LE--------PLPDC--EAKDLISRMLNPDPQLRPSATDV  764 (903)
T ss_pred             ec--------cCchH--HHHHHHHHhcCCCcccCCCHHHH
Confidence            00        01111  68999999999999999999875

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=1.2e-27  Score=200.36  Aligned_cols=128  Identities=18%  Similarity=0.201  Sum_probs=109.0

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCCCchHHHHHHHHHHHhhcC--------CCcceeEeeEeec---
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIR--------HQNLIKIISSCSK---   99 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~--------h~~i~~~~~~~~~---   99 (263)
                      .+|...++||+|.|++||+|- .+..+.||+|+.+..+ ...+....||.+|++++        ..+||++++.|.-   
T Consensus        78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq-hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp  156 (590)
T KOG1290|consen   78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ-HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP  156 (590)
T ss_pred             ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh-HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence            569999999999999999998 5668889999988763 45566778999999883        3578999999853   


Q ss_pred             -CCeeEEEEeccCCCCHhhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccC-CccccccCCCccc
Q 039276          100 -DDFKALILECMPHGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFG-HSTHLLLKEDQSL  161 (263)
Q Consensus       100 -~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~-~i~h~dlk~~nil  161 (263)
                       +.++|+|+|++ |.+|-.+|.... ++++...+++|+.||+.||.|||.. ||+|.||||+|||
T Consensus       157 NG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvL  220 (590)
T KOG1290|consen  157 NGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVL  220 (590)
T ss_pred             CCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceee
Confidence             45899999998 559999987644 4499999999999999999999966 8999999999999

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.95  E-value=5.5e-28  Score=216.85  Aligned_cols=220  Identities=17%  Similarity=0.138  Sum_probs=137.9

Q ss_pred             cccccccceecccCceEEEEEEe-cC----CceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeE------eec
Q 039276           31 LFLFSESNLISRGGFGSIYKAKI-QD----GMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISS------CSK   99 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~-~~----~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~------~~~   99 (263)
                      .+.|+..+.||+|+||.||+|.. .+    +..||+|++.....  ......+  .+....+.++..+...      ...
T Consensus       131 ~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~~  206 (566)
T PLN03225        131 KDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSSKK  206 (566)
T ss_pred             cCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhccccccc
Confidence            45699999999999999999994 45    68999998764321  1111111  1111112222221111      234


Q ss_pred             CCeeEEEEeccCCCCHhhhhhhCCCcc-------------------cHHHHHHHHHHHHHHHHHhccCCccccccCCCcc
Q 039276          100 DDFKALILECMPHGSLGKCLSTSNYIL-------------------DFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQS  160 (263)
Q Consensus       100 ~~~~~lv~e~~~~~~L~~~l~~~~~~~-------------------~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~ni  160 (263)
                      ....++++||+++++|.+++.......                   ....+..++.|++.||+|||+++|+||||||+||
T Consensus       207 ~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NI  286 (566)
T PLN03225        207 EDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNI  286 (566)
T ss_pred             CCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHE
Confidence            557899999999999999887543211                   1234567999999999999999999999999999


Q ss_pred             ccccc-------------------------ccccccccCc----------------------------------chhhHH
Q 039276          161 LTQIQ-------------------------TLATISYMAP----------------------------------DTYNFG  181 (263)
Q Consensus       161 l~~~~-------------------------~~g~~~y~aP----------------------------------Dv~SlG  181 (263)
                      +.+..                         ..+++.|+||                                  ||||||
T Consensus       287 Ll~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlG  366 (566)
T PLN03225        287 IFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAG  366 (566)
T ss_pred             EEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHH
Confidence            96421                         1345667776                                  999999


Q ss_pred             HHHHHHHhCCCCCccc--------cCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccC
Q 039276          182 IMIMETFSGKKPTIKF--------FHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVES  253 (263)
Q Consensus       182 ~il~ell~g~~Pf~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~  253 (263)
                      |++|||+++..|++..        ......+..|......         .........+...........+|+.+||+.|
T Consensus       367 viL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~d  437 (566)
T PLN03225        367 LIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEP---------RASPDLRRGFEVLDLDGGAGWELLKSMMRFK  437 (566)
T ss_pred             HHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhcc---------ccchhhhhhhhhccccchHHHHHHHHHccCC
Confidence            9999999977765421        0011111122111110         0000000000001111234568999999999


Q ss_pred             cCCCCCccCC
Q 039276          254 PNQRINAKEM  263 (263)
Q Consensus       254 p~~Rpt~~ev  263 (263)
                      |++|||+.|+
T Consensus       438 P~kR~ta~e~  447 (566)
T PLN03225        438 GRQRISAKAA  447 (566)
T ss_pred             cccCCCHHHH
Confidence            9999999864

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=1.3e-28  Score=202.86  Aligned_cols=208  Identities=16%  Similarity=0.186  Sum_probs=166.4

Q ss_pred             cccccccceecccCceEEEEEE-ecCCceEEEEEeecC---CCchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCeeEE
Q 039276           31 LFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQ---YGGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFKAL  105 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~---~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~l  105 (263)
                      ..+|.....||.|+||+|.++. ..+...+|||+++++   +..+.+--+.|-++|... +-|.++++...|++-..+|+
T Consensus       348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyF  427 (683)
T KOG0696|consen  348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYF  427 (683)
T ss_pred             ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheee
Confidence            4679999999999999999998 455778999999876   223333344566667666 56888899999999999999


Q ss_pred             EEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc---------------------
Q 039276          106 ILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI---------------------  164 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~---------------------  164 (263)
                      ||||+.+|+|.-.+++-++ +.++.+..++.+|+-||-+||++||+.||||.+||++++                     
T Consensus       428 VMEyvnGGDLMyhiQQ~Gk-FKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~T  506 (683)
T KOG0696|consen  428 VMEYVNGGDLMYHIQQVGK-FKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGVT  506 (683)
T ss_pred             EEEEecCchhhhHHHHhcc-cCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecccccccccCCcc
Confidence            9999999999999987665 788888999999999999999999999999999999554                     


Q ss_pred             --cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccc
Q 039276          165 --QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDE  230 (263)
Q Consensus       165 --~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (263)
                        +..||+.|+||            |.||+||+||||+.|..||+.- .+++.+...            .+...      
T Consensus       507 TkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGe-DE~elF~aI------------~ehnv------  567 (683)
T KOG0696|consen  507 TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGE-DEDELFQAI------------MEHNV------  567 (683)
T ss_pred             eeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCC-CHHHHHHHH------------HHccC------
Confidence              34689999999            9999999999999999998742 111222222            11111      


Q ss_pred             cccchHHHHHHHHHhhccccccCcCCCCCc
Q 039276          231 HFMTKEQCMSFVFNLAMECTVESPNQRINA  260 (263)
Q Consensus       231 ~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~  260 (263)
                        ..+...+.++.++....+...|.+|...
T Consensus       568 --syPKslSkEAv~ickg~ltK~P~kRLGc  595 (683)
T KOG0696|consen  568 --SYPKSLSKEAVAICKGLLTKHPGKRLGC  595 (683)
T ss_pred             --cCcccccHHHHHHHHHHhhcCCccccCC
Confidence              1355677789999999999999999643

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.95  E-value=1.1e-29  Score=197.12  Aligned_cols=233  Identities=17%  Similarity=0.275  Sum_probs=167.5

Q ss_pred             ccccccccceecccCceEEEEEE-ecCCceEEEEEeecC--CCchHHHHHHHHHHHhhcCCCcceeEeeEeec-------
Q 039276           30 GLFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQ--YGGAFKNLDVECNMMKIIRHQNLIKIISSCSK-------   99 (263)
Q Consensus        30 ~~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-------   99 (263)
                      ....|+...++|+|.||.||+|+ ..++++|++|+.-..  ..+.-....+|+.++..++|+|++.+++.|..       
T Consensus        15 ~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r   94 (376)
T KOG0669|consen   15 EVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNR   94 (376)
T ss_pred             cchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccc
Confidence            34569999999999999999999 566888888876432  33445556789999999999999999888743       


Q ss_pred             -CCeeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc--------------
Q 039276          100 -DDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI--------------  164 (263)
Q Consensus       100 -~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~--------------  164 (263)
                       ....|+|+++|+. +|.-++......++...+.+++.++..||.|+|...|+|||+|++|++++.              
T Consensus        95 ~r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~  173 (376)
T KOG0669|consen   95 DRATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARA  173 (376)
T ss_pred             ccceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccccccc
Confidence             2358999999987 999999877666999999999999999999999999999999999999543              


Q ss_pred             -------------cccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCc-hh-hhHhhhcCCC--
Q 039276          165 -------------QTLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEM-TL-KHWVNDLLPN--  214 (263)
Q Consensus       165 -------------~~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~-~~-~~~~~~~~~~--  214 (263)
                                   +.+.|..|++|             |||..||++.||+++.+.+....+... .+ +.+....-++  
T Consensus       174 fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevW  253 (376)
T KOG0669|consen  174 FSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVW  253 (376)
T ss_pred             eecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccC
Confidence                         22447788888             999999999999999998764322211 11 1111111111  


Q ss_pred             ------chhhhhhhccccccccc----ccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          215 ------SVMKVVSANLLSREDEH----FMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       215 ------~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                            +..+-+.....+....+    ...+-.-.+++.+|+.+++..||.+|++++++
T Consensus       254 P~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~a  312 (376)
T KOG0669|consen  254 PNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQA  312 (376)
T ss_pred             CCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhh
Confidence                  01111100001110000    00111224478999999999999999998763

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.95  E-value=3.4e-27  Score=207.42  Aligned_cols=225  Identities=18%  Similarity=0.226  Sum_probs=149.5

Q ss_pred             cccccccceecccCceEEEEEEe-----------------cCCceEEEEEeecCCCchHHHH--------------HHHH
Q 039276           31 LFLFSESNLISRGGFGSIYKAKI-----------------QDGMEVVVKGFNLQYGGAFKNL--------------DVEC   79 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~-----------------~~~~~v~vK~~~~~~~~~~~~~--------------~~e~   79 (263)
                      .+.|+..++||+|+||.||+|..                 ..++.||||.+........+.+              ..|+
T Consensus       144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~  223 (507)
T PLN03224        144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA  223 (507)
T ss_pred             ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence            45699999999999999999963                 2356799999876543322222              2355


Q ss_pred             HHHhhcCCCc-----ceeEeeEeec--------CCeeEEEEeccCCCCHhhhhhhCCC----------------------
Q 039276           80 NMMKIIRHQN-----LIKIISSCSK--------DDFKALILECMPHGSLGKCLSTSNY----------------------  124 (263)
Q Consensus        80 ~~l~~~~h~~-----i~~~~~~~~~--------~~~~~lv~e~~~~~~L~~~l~~~~~----------------------  124 (263)
                      ..+..++|.+     ++++++++..        .+..++|+||+++++|.+++.....                      
T Consensus       224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~  303 (507)
T PLN03224        224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ  303 (507)
T ss_pred             HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence            6666665544     3566666532        3457999999999999998864211                      


Q ss_pred             -cccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc------------------------cccccccCc----
Q 039276          125 -ILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT------------------------LATISYMAP----  175 (263)
Q Consensus       125 -~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~------------------------~g~~~y~aP----  175 (263)
                       ..++..+..++.|++.+|.|||..+++||||||+||+.....                        .+++.|+||    
T Consensus       304 ~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~  383 (507)
T PLN03224        304 DKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELV  383 (507)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhc
Confidence             134566788999999999999999999999999999843211                        125667776    


Q ss_pred             ------------------------------chhhHHHHHHHHHhCCC-CCccccCCCchhhhHhhhcCCCchhhhhhhcc
Q 039276          176 ------------------------------DTYNFGIMIMETFSGKK-PTIKFFHGEMTLKHWVNDLLPNSVMKVVSANL  224 (263)
Q Consensus       176 ------------------------------Dv~SlG~il~ell~g~~-Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (263)
                                                    ||||+||++++|+++.. ||.....-...+..+-..  .....      .
T Consensus       384 ~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~--~~~~r------~  455 (507)
T PLN03224        384 MPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDND--LNRWR------M  455 (507)
T ss_pred             CCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccch--HHHHH------h
Confidence                                          99999999999999875 665321111111100000  00000      0


Q ss_pred             cccccccccchHHHHHHHHHhhccccccCc---CCCCCccCC
Q 039276          225 LSREDEHFMTKEQCMSFVFNLAMECTVESP---NQRINAKEM  263 (263)
Q Consensus       225 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p---~~Rpt~~ev  263 (263)
                      .......++....++++..+++.+||..+|   .+|+|++|+
T Consensus       456 ~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~ea  497 (507)
T PLN03224        456 YKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQA  497 (507)
T ss_pred             hcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHH
Confidence            011111122234567779999999999866   689999763

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.95  E-value=1.1e-27  Score=206.31  Aligned_cols=165  Identities=18%  Similarity=0.296  Sum_probs=142.5

Q ss_pred             cccccceecccCceEEEEEE-ecCCceEEEEEeecCC---CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEe
Q 039276           33 LFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      -|...+.||-|+||+|.+++ ..+...+|.|.+.+.+   .......+.|-.+|...++.=||+++-.|++...+|+||+
T Consensus       630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMd  709 (1034)
T KOG0608|consen  630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD  709 (1034)
T ss_pred             ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEe
Confidence            48888999999999999999 4556778999997763   2344556678889999999999999999999999999999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------  165 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------  165 (263)
                      |++||++..++-+-+ .+++..+..++.++..|+++.|..|+|||||||+|||++.+                       
T Consensus       710 YIPGGDmMSLLIrmg-IFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYY  788 (1034)
T KOG0608|consen  710 YIPGGDMMSLLIRMG-IFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYY  788 (1034)
T ss_pred             ccCCccHHHHHHHhc-cCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceeccccccc
Confidence            999999999886544 37888888899999999999999999999999999993321                       


Q ss_pred             ------------------------------------------ccccccccCc------------chhhHHHHHHHHHhCC
Q 039276          166 ------------------------------------------TLATISYMAP------------DTYNFGIMIMETFSGK  191 (263)
Q Consensus       166 ------------------------------------------~~g~~~y~aP------------Dv~SlG~il~ell~g~  191 (263)
                                                                .+||..|+||            |.||.|||||||+.|+
T Consensus       789 q~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~  868 (1034)
T KOG0608|consen  789 QEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQ  868 (1034)
T ss_pred             cCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCC
Confidence                                                      2689999999            9999999999999999


Q ss_pred             CCCcccc
Q 039276          192 KPTIKFF  198 (263)
Q Consensus       192 ~Pf~~~~  198 (263)
                      +||-...
T Consensus       869 ~pf~~~t  875 (1034)
T KOG0608|consen  869 PPFLADT  875 (1034)
T ss_pred             CCccCCC
Confidence            9996543

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=1e-27  Score=193.15  Aligned_cols=213  Identities=15%  Similarity=0.189  Sum_probs=163.5

Q ss_pred             cccccccceecccCceEEEEEE-ecCCceEEEEEeecC---CCchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCeeEE
Q 039276           31 LFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQ---YGGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFKAL  105 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~---~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~l  105 (263)
                      ..+|+..+.||+|++++|-.++ .++.+-+|+|++++.   +.++.+-...|-.+..+. +||.+|-+...|++.+.+++
T Consensus       249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff  328 (593)
T KOG0695|consen  249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF  328 (593)
T ss_pred             cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence            4679999999999999999998 566788999998765   223333334455555555 79999999999999999999


Q ss_pred             EEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccc----------------------
Q 039276          106 ILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQ----------------------  163 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~----------------------  163 (263)
                      |.||+++|+|.-.+++..+ ++++.+..+..+|..||.|||++||+.||||.+|++++                      
T Consensus       329 vieyv~ggdlmfhmqrqrk-lpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l~~gd~  407 (593)
T KOG0695|consen  329 VIEYVNGGDLMFHMQRQRK-LPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGDT  407 (593)
T ss_pred             EEEEecCcceeeehhhhhc-CcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCCCCCcc
Confidence            9999999999988877655 99999999999999999999999999999999999943                      


Q ss_pred             -ccccccccccCc------------chhhHHHHHHHHHhCCCCCccccC--CCchhhhHhhhcCCCchhhhhhhcccccc
Q 039276          164 -IQTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFH--GEMTLKHWVNDLLPNSVMKVVSANLLSRE  228 (263)
Q Consensus       164 -~~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (263)
                       ++..||+.|+||            |.|+|||+++||+.|+.||+-...  .+..-+.++-.       -++.+..    
T Consensus       408 tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfq-------vilekqi----  476 (593)
T KOG0695|consen  408 TSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQ-------VILEKQI----  476 (593)
T ss_pred             cccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHH-------HHhhhcc----
Confidence             355799999999            999999999999999999985321  11111111100       0011110    


Q ss_pred             cccccchHHHHHHHHHhhccccccCcCCCCC
Q 039276          229 DEHFMTKEQCMSFVFNLAMECTVESPNQRIN  259 (263)
Q Consensus       229 ~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt  259 (263)
                          ..+...+..+..+++.-|+.||.+|..
T Consensus       477 ----riprslsvkas~vlkgflnkdp~erlg  503 (593)
T KOG0695|consen  477 ----RIPRSLSVKASHVLKGFLNKDPKERLG  503 (593)
T ss_pred             ----cccceeehhhHHHHHHhhcCCcHHhcC
Confidence                123344445677888889999999864

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=1.1e-28  Score=207.62  Aligned_cols=208  Identities=19%  Similarity=0.235  Sum_probs=165.1

Q ss_pred             ccccccceecccCceEEEEEEec-CCceEEEEEeecC---CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ-DGMEVVVKGFNLQ---YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~-~~~~v~vK~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      .+++....||-|+||.|-+.+.. ....+|+|++++.   +......+-.|=+++...+.+.|+++|-.|.+++++|++|
T Consensus       420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLm  499 (732)
T KOG0614|consen  420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLM  499 (732)
T ss_pred             hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhH
Confidence            45777788999999999998844 3334788888765   3334455667888999999999999999999999999999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc----------------------c
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI----------------------Q  165 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~----------------------~  165 (263)
                      |-|-||.|+..++..+. +.......+...+++|++|||.++|++|||||+|.+++.                      +
T Consensus       500 EaClGGElWTiLrdRg~-Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~KTwT  578 (732)
T KOG0614|consen  500 EACLGGELWTILRDRGS-FDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRKTWT  578 (732)
T ss_pred             HhhcCchhhhhhhhcCC-cccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhccCCceee
Confidence            99999999999987665 888888899999999999999999999999999999554                      3


Q ss_pred             ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccccc
Q 039276          166 TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFM  233 (263)
Q Consensus       166 ~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (263)
                      ..||+.|.||            |.||||+++|||++|++||.....- ..             ..++-+..   +..  .
T Consensus       579 FcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpm-kt-------------Yn~ILkGi---d~i--~  639 (732)
T KOG0614|consen  579 FCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPM-KT-------------YNLILKGI---DKI--E  639 (732)
T ss_pred             ecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchH-HH-------------HHHHHhhh---hhh--h
Confidence            4789999999            9999999999999999999753110 00             11111111   100  1


Q ss_pred             chHHHHHHHHHhhccccccCcCCCCC
Q 039276          234 TKEQCMSFVFNLAMECTVESPNQRIN  259 (263)
Q Consensus       234 ~~~~~~~~l~~l~~~cl~~~p~~Rpt  259 (263)
                      .|..+...+.++++++..-+|.+|.-
T Consensus       640 ~Pr~I~k~a~~Lik~LCr~~P~ERLG  665 (732)
T KOG0614|consen  640 FPRRITKTATDLIKKLCRDNPTERLG  665 (732)
T ss_pred             cccccchhHHHHHHHHHhcCcHhhhc
Confidence            24556667899999999999999975

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.94  E-value=2.3e-27  Score=202.32  Aligned_cols=164  Identities=19%  Similarity=0.293  Sum_probs=141.2

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCC--------CchHHHHHHHHHHHhhcC---CCcceeEeeEeec
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY--------GGAFKNLDVECNMMKIIR---HQNLIKIISSCSK   99 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~--------~~~~~~~~~e~~~l~~~~---h~~i~~~~~~~~~   99 (263)
                      .+|....++|.|+||+|++|. ..+...|++|.+.++.        ....-....||++++.++   |+||++++++|++
T Consensus       561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd  640 (772)
T KOG1152|consen  561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED  640 (772)
T ss_pred             ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence            469999999999999999999 4556778999886642        112223557999999997   9999999999999


Q ss_pred             CCeeEEEEecc-CCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-------------
Q 039276          100 DDFKALILECM-PHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-------------  165 (263)
Q Consensus       100 ~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-------------  165 (263)
                      .++.|++||-- ++-+|.+++..... +.+...+.|+.|++.|+++||+.+|+|||||-+|+..++.             
T Consensus       641 dd~yyl~te~hg~gIDLFd~IE~kp~-m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgsaa~  719 (772)
T KOG1152|consen  641 DDYYYLETEVHGEGIDLFDFIEFKPR-MDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSAAY  719 (772)
T ss_pred             CCeeEEEecCCCCCcchhhhhhccCc-cchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeeccchhh
Confidence            99999999954 45699999987655 8999999999999999999999999999999999996553             


Q ss_pred             --------ccccccccCc-------------chhhHHHHHHHHHhCCCCCcc
Q 039276          166 --------TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIK  196 (263)
Q Consensus       166 --------~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~  196 (263)
                              .+||..|.||             |||++|++||-++....||..
T Consensus       720 ~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn  771 (772)
T KOG1152|consen  720 TKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN  771 (772)
T ss_pred             hcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence                    3689999999             999999999999999999853

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.94  E-value=2.4e-28  Score=190.79  Aligned_cols=214  Identities=18%  Similarity=0.203  Sum_probs=160.5

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCCC-chHHHHHHHHHHHhhc-CCCcceeEeeEeecCCeeEEEEe
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYG-GAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~-~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      +..+....||.|+||.|++-. ...|+..|||.+..... ...+++..|.++..+- +.|+||+++|.+..++.-++-||
T Consensus        64 ~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCME  143 (361)
T KOG1006|consen   64 DNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICME  143 (361)
T ss_pred             chHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHH
Confidence            346677889999999999988 66799999999987643 5677888888866655 78999999999999999999999


Q ss_pred             ccCCCCHhhhhhh----CCCcccHHHHHHHHHHHHHHHHHhcc-CCccccccCCCcccccccc-----------------
Q 039276          109 CMPHGSLGKCLST----SNYILDFFQRLHIMIDVASAVEYLHF-GHSTHLLLKEDQSLTQIQT-----------------  166 (263)
Q Consensus       109 ~~~~~~L~~~l~~----~~~~~~~~~~~~i~~~i~~~l~~lH~-~~i~h~dlk~~nil~~~~~-----------------  166 (263)
                      .|.- ++..+-+.    ....+++.-+..|..-.+.||.||.. ..|+|||+||+|||++..+                 
T Consensus       144 LMd~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~Si  222 (361)
T KOG1006|consen  144 LMDI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSI  222 (361)
T ss_pred             HHhh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHHH
Confidence            9954 77665442    22337888778888888999999985 4799999999999965432                 


Q ss_pred             -----cccccccCc--------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccc
Q 039276          167 -----LATISYMAP--------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSR  227 (263)
Q Consensus       167 -----~g~~~y~aP--------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (263)
                           .|-..||||              ||||||++|+|+.||+.||..-..   .+             +.+-.-....
T Consensus       223 AkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s---vf-------------eql~~Vv~gd  286 (361)
T KOG1006|consen  223 AKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS---VF-------------EQLCQVVIGD  286 (361)
T ss_pred             HhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH---HH-------------HHHHHHHcCC
Confidence                 567779999              999999999999999999864211   01             1111101111


Q ss_pred             ccccccch---HHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          228 EDEHFMTK---EQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       228 ~~~~~~~~---~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                       +.....+   -..+..+.+++..|+..|-++||...++
T Consensus       287 -pp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~L  324 (361)
T KOG1006|consen  287 -PPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDL  324 (361)
T ss_pred             -CCeecCcccccccCHHHHHHHHHHhhcccccCcchhhh
Confidence             0000111   2355669999999999999999998764

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.94  E-value=8.4e-27  Score=192.35  Aligned_cols=225  Identities=19%  Similarity=0.267  Sum_probs=170.9

Q ss_pred             ccccccceecccCceEEEEEEe-c---CCceEEEEEeecCCCchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCeeEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-Q---DGMEVVVKGFNLQYGGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFKALI  106 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~---~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv  106 (263)
                      ..|...+++|.|.|+.||.+.. .   ..+.||+|.+..-.  ...++.+|++++..+ .+.||+++.+.+..++...+|
T Consensus        36 ~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~iv  113 (418)
T KOG1167|consen   36 NAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIV  113 (418)
T ss_pred             hhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEE
Confidence            3488999999999999999983 3   46789999986553  345688999999988 699999999999999999999


Q ss_pred             EeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccc------------------------
Q 039276          107 LECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLT------------------------  162 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~------------------------  162 (263)
                      +||++.....++...    ++...+..++..++.||+++|..||+|||+||.|++-                        
T Consensus       114 lp~~~H~~f~~l~~~----l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~  189 (418)
T KOG1167|consen  114 LPYFEHDRFRDLYRS----LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQT  189 (418)
T ss_pred             ecccCccCHHHHHhc----CCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHHHhhhhh
Confidence            999999998888876    6678889999999999999999999999999999990                        


Q ss_pred             --------------------------------------------cccccccccccCc-------------chhhHHHHHH
Q 039276          163 --------------------------------------------QIQTLATISYMAP-------------DTYNFGIMIM  185 (263)
Q Consensus       163 --------------------------------------------~~~~~g~~~y~aP-------------Dv~SlG~il~  185 (263)
                                                                  ..+..||++|+||             ||||.|||+.
T Consensus       190 ~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~L  269 (418)
T KOG1167|consen  190 EHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILL  269 (418)
T ss_pred             hhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccceee
Confidence                                                        0133689999999             9999999999


Q ss_pred             HHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhh----------------------------ccccccc---ccccc
Q 039276          186 ETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSA----------------------------NLLSRED---EHFMT  234 (263)
Q Consensus       186 ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~---~~~~~  234 (263)
                      .+++++.||....+.-..+.+......+.++.+.+-.                            ...+...   .+...
T Consensus       270 slls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~  349 (418)
T KOG1167|consen  270 SLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIG  349 (418)
T ss_pred             hhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeeccc
Confidence            9999999997654444433333222222111110000                            0000000   11111


Q ss_pred             hHHHHHHHHHhhccccccCcCCCCCccC
Q 039276          235 KEQCMSFVFNLAMECTVESPNQRINAKE  262 (263)
Q Consensus       235 ~~~~~~~l~~l~~~cl~~~p~~Rpt~~e  262 (263)
                      ....+..+.+++.+|+..||.+|.|+++
T Consensus       350 ~d~~~~~~~dlLdk~le~np~kRitAEe  377 (418)
T KOG1167|consen  350 SDVFPALLLDLLDKCLELNPQKRITAED  377 (418)
T ss_pred             cccccHHHHHHHHHHccCChhhcccHHH
Confidence            2233446899999999999999999986

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.93  E-value=9.1e-25  Score=171.94  Aligned_cols=172  Identities=27%  Similarity=0.438  Sum_probs=148.3

Q ss_pred             ecccCceEEEEEEec-CCceEEEEEeecCCCc-hHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccCCCCHhh
Q 039276           40 ISRGGFGSIYKAKIQ-DGMEVVVKGFNLQYGG-AFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLGK  117 (263)
Q Consensus        40 lg~g~~g~v~~~~~~-~~~~v~vK~~~~~~~~-~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~  117 (263)
                      ||+|.+|.||++... ++..+++|.+...... ..+.+.+|++.++.+.|++++++++++......++++|++++++|.+
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~   80 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD   80 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence            689999999999954 4899999999876433 35678899999999999999999999998889999999999899999


Q ss_pred             hhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-cc-----------------------ccccccc
Q 039276          118 CLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-QT-----------------------LATISYM  173 (263)
Q Consensus       118 ~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-~~-----------------------~g~~~y~  173 (263)
                      ++.......+...+..++.+++.++++||..+++|+||+|.||+... ..                       .+...|+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~  160 (215)
T cd00180          81 LLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYM  160 (215)
T ss_pred             HHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCCCCcc
Confidence            99865334788999999999999999999999999999999999665 11                       1344566


Q ss_pred             Cc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHHHHH
Q 039276          174 AP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMS  240 (263)
Q Consensus       174 aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (263)
                      +|             |+|++|++++++                                                    .
T Consensus       161 ~pe~~~~~~~~~~~~D~~~lg~~~~~l----------------------------------------------------~  188 (215)
T cd00180         161 APEVLLGKGYYSEKSDIWSLGVILYEL----------------------------------------------------P  188 (215)
T ss_pred             ChhHhcccCCCCchhhhHHHHHHHHHH----------------------------------------------------H
Confidence            66             999999999999                                                    2


Q ss_pred             HHHHhhccccccCcCCCCCccCC
Q 039276          241 FVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       241 ~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .+.+++..|++.+|++||++.++
T Consensus       189 ~~~~~l~~~l~~~p~~R~~~~~l  211 (215)
T cd00180         189 ELKDLIRKMLQKDPEKRPSAKEI  211 (215)
T ss_pred             HHHHHHHHHhhCCcccCcCHHHH
Confidence            38899999999999999998764

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.92  E-value=3.9e-24  Score=170.74  Aligned_cols=163  Identities=23%  Similarity=0.330  Sum_probs=140.8

Q ss_pred             ccccceecccCceEEEEEEec-CCceEEEEEeecCCCc-hHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccC
Q 039276           34 FSESNLISRGGFGSIYKAKIQ-DGMEVVVKGFNLQYGG-AFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMP  111 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~~-~~~~v~vK~~~~~~~~-~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~  111 (263)
                      |...+.+|+|++|.||++... ++.++++|.+...... ..+.+.+|++.++.++|+|++++++.+......++++|+++
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE   80 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence            456788999999999999955 4889999999877554 67788899999999999999999999988888999999999


Q ss_pred             CCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc------------------------ccc
Q 039276          112 HGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI------------------------QTL  167 (263)
Q Consensus       112 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~------------------------~~~  167 (263)
                      +++|.+++......+++..+..++.+++.++.+||+.+++|+|+++.|++.+.                        ...
T Consensus        81 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~~~  160 (225)
T smart00221       81 GGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKTVK  160 (225)
T ss_pred             CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccccccccee
Confidence            99999999765433688889999999999999999999999999999998542                        123


Q ss_pred             ccccccCc-------------chhhHHHHHHHHHhCCCCCcc
Q 039276          168 ATISYMAP-------------DTYNFGIMIMETFSGKKPTIK  196 (263)
Q Consensus       168 g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~  196 (263)
                      ++..|++|             |||+||+++++|++|+.||..
T Consensus       161 ~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~  202 (225)
T smart00221      161 GTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG  202 (225)
T ss_pred             ccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence            44456666             999999999999999999964

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.92  E-value=6.3e-26  Score=196.37  Aligned_cols=217  Identities=22%  Similarity=0.299  Sum_probs=175.8

Q ss_pred             cccccccccceecccCceEEEEEE-ecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           29 SGLFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        29 ~~~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      ...++|+....+|.|.+|.||+++ ..++...|+|.++.....+.+-+.+||-+++-.+|+||+.+++.+......++.|
T Consensus        12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicM   91 (829)
T KOG0576|consen   12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICM   91 (829)
T ss_pred             CCccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEE
Confidence            345679999999999999999999 6679999999999998888888889999999999999999999999888999999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-----------------------
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-----------------------  164 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-----------------------  164 (263)
                      |||-+|+|.+.-...+ .+.+-++..+..+.+.|++|||+.+=+|||||..||++..                       
T Consensus        92 EycgggslQdiy~~Tg-plselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqitati~Krk  170 (829)
T KOG0576|consen   92 EYCGGGSLQDIYHVTG-PLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKRK  170 (829)
T ss_pred             EecCCCcccceeeecc-cchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhhhhhhhh
Confidence            9999999998665443 4889999999999999999999999999999999999433                       


Q ss_pred             cccccccccCc---------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccc
Q 039276          165 QTLATISYMAP---------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSRED  229 (263)
Q Consensus       165 ~~~g~~~y~aP---------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (263)
                      ...||+.||||               |||++|+...|+-.-..|-..              .-+-+...+..+.....  
T Consensus       171 sfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfd--------------lhpmr~l~LmTkS~~qp--  234 (829)
T KOG0576|consen  171 SFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFD--------------LHPMRALFLMTKSGFQP--  234 (829)
T ss_pred             cccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccc--------------cchHHHHHHhhccCCCC--
Confidence            34799999999               999999999999988877221              11111111111111110  


Q ss_pred             ccccchHHHHHHHHHhhccccccCcCCCCCccC
Q 039276          230 EHFMTKEQCMSFVFNLAMECTVESPNQRINAKE  262 (263)
Q Consensus       230 ~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~e  262 (263)
                      .........++.+.++++.|+..+|++|||++.
T Consensus       235 p~lkDk~kws~~fh~fvK~altknpKkRptaek  267 (829)
T KOG0576|consen  235 PTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEK  267 (829)
T ss_pred             CcccCCccchHHHHHHHHHHhcCCCccCCChhh
Confidence            001123455677999999999999999999875

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.92  E-value=3.2e-25  Score=177.31  Aligned_cols=225  Identities=20%  Similarity=0.206  Sum_probs=158.6

Q ss_pred             ccccccccceecccCceEEEEEEe-cCCceEEEEEeecC--CCchHHHHHHHHHHHhhcCCCcceeEeeEeecC------
Q 039276           30 GLFLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQ--YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKD------  100 (263)
Q Consensus        30 ~~~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~------  100 (263)
                      ...+|....++|.|.= .|..+.. -.+++|++|+....  .....++..+|..++..++|+|+++++.++.-.      
T Consensus        15 v~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~   93 (369)
T KOG0665|consen   15 VPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEF   93 (369)
T ss_pred             eeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHH
Confidence            3456888888888876 4555542 24889999988543  233456677899999999999999999998432      


Q ss_pred             CeeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccc-----------------
Q 039276          101 DFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQ-----------------  163 (263)
Q Consensus       101 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~-----------------  163 (263)
                      ...|+|||++.. +|.+.+...   ++-..+..++.|++.|+++||+.+|+||||||+||+..                 
T Consensus        94 ~e~y~v~e~m~~-nl~~vi~~e---lDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~  169 (369)
T KOG0665|consen   94 QEVYLVMELMDA-NLCQVILME---LDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTED  169 (369)
T ss_pred             HhHHHHHHhhhh-HHHHHHHHh---cchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcccC
Confidence            247899999965 999888732   67788899999999999999999999999999999833                 


Q ss_pred             -----ccccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhc-----CCCchhhhhh
Q 039276          164 -----IQTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDL-----LPNSVMKVVS  221 (263)
Q Consensus       164 -----~~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~-----~~~~~~~~~~  221 (263)
                           +..+.+..|.||            ||||+||++.||++|+.-|.    +...+..|....     .+....+...
T Consensus       170 ~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~----g~d~idQ~~ki~~~lgtpd~~F~~qL~  245 (369)
T KOG0665|consen  170 TDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFP----GKDHIDQWNKIIEQLGTPDPSFMKQLQ  245 (369)
T ss_pred             cccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEec----CchHHHHHHHHHHHhcCCCHHHHHHhh
Confidence                 334678889999            99999999999999999876    333333332111     1111111110


Q ss_pred             hc------ccccccc--------------cccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          222 AN------LLSREDE--------------HFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       222 ~~------~~~~~~~--------------~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +.      ..+....              ....+..-...+++++.+||..||++|.+++++
T Consensus       246 ~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~da  307 (369)
T KOG0665|consen  246 PTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDA  307 (369)
T ss_pred             HHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHH
Confidence            00      0000000              000111223458999999999999999998763

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.91  E-value=7.5e-25  Score=171.83  Aligned_cols=210  Identities=19%  Similarity=0.235  Sum_probs=155.5

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCCCchHHHHHHHHHHHhhc-CCCcceeEeeE-eecCCeeEEEEe
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKII-RHQNLIKIISS-CSKDDFKALILE  108 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~-~~~~~~~~lv~e  108 (263)
                      +.|...+.+|+|.||++-++. .++.+.+++|-+... ......+.+|...--.+ .|.||+.-++. |++.++.++++|
T Consensus        24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE  102 (378)
T KOG1345|consen   24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP-QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQE  102 (378)
T ss_pred             hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc-hhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeec
Confidence            459999999999999999998 566788888887644 34556777888765555 58999977764 577788899999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc--------------cc-------
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ--------------TL-------  167 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~--------------~~-------  167 (263)
                      |+|.|+|++-+...  ++.+...+.++.|+++|+.|+|++++||||||.+|||+-..              ..       
T Consensus       103 ~aP~gdL~snv~~~--GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~~~  180 (378)
T KOG1345|consen  103 FAPRGDLRSNVEAA--GIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVKYL  180 (378)
T ss_pred             cCccchhhhhcCcc--cccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCceehhh
Confidence            99999999977553  37888889999999999999999999999999999993211              01       


Q ss_pred             -ccccccCc-----------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccc
Q 039276          168 -ATISYMAP-----------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSRED  229 (263)
Q Consensus       168 -g~~~y~aP-----------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (263)
                       -+..|-+|                 |||.||++++.++||+.||......+....+|..         +........+.
T Consensus       181 ~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~---------w~~rk~~~~P~  251 (378)
T KOG1345|consen  181 EYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQ---------WLKRKNPALPK  251 (378)
T ss_pred             hhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHH---------HhcccCccCch
Confidence             13346666                 9999999999999999999865555555544432         11111111110


Q ss_pred             ccccchHHHHHHHHHhhccccccCcCCC
Q 039276          230 EHFMTKEQCMSFVFNLAMECTVESPNQR  257 (263)
Q Consensus       230 ~~~~~~~~~~~~l~~l~~~cl~~~p~~R  257 (263)
                          ...-.++.+.++.++-|..++++|
T Consensus       252 ----~F~~fs~~a~r~Fkk~lt~~~~dr  275 (378)
T KOG1345|consen  252 ----KFNPFSEKALRLFKKSLTPRFKDR  275 (378)
T ss_pred             ----hhcccCHHHHHHHHHhcCCccccc
Confidence                122334457777778888888877

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.91  E-value=3.8e-25  Score=186.95  Aligned_cols=164  Identities=20%  Similarity=0.203  Sum_probs=135.0

Q ss_pred             ccccccceecccCceEEEEEEec-CCceEEEEEeecCCCchHHHHHHHHHHHhhcC------CCcceeEeeEeecCCeeE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ-DGMEVVVKGFNLQYGGAFKNLDVECNMMKIIR------HQNLIKIISSCSKDDFKA  104 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~-~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~------h~~i~~~~~~~~~~~~~~  104 (263)
                      .+|......|+|-|+.|.+|..+ .|+.||||++...+.- -+.=..|+++|++++      ..|++.++-.|.-.+++|
T Consensus       432 ~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M-~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLC  510 (752)
T KOG0670|consen  432 SRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVM-HKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLC  510 (752)
T ss_pred             ceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHH-hhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeE
Confidence            46888888899999999999944 4889999999755211 122346899999995      478899988888889999


Q ss_pred             EEEeccCCCCHhhhhhhCCCc--ccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------
Q 039276          105 LILECMPHGSLGKCLSTSNYI--LDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------  165 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------  165 (263)
                      +|+|.+.- +|+++++.-+..  +....+..++.|+..||..|...+++|.||||+|||.+..                 
T Consensus       511 lVFE~Lsl-NLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~e  589 (752)
T KOG0670|consen  511 LVFEPLSL-NLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGSASFASE  589 (752)
T ss_pred             EEehhhhc-hHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCcccccccc
Confidence            99998855 999999875544  6677888899999999999999999999999999995432                 


Q ss_pred             -----ccccccccCc------------chhhHHHHHHHHHhCCCCCccc
Q 039276          166 -----TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKF  197 (263)
Q Consensus       166 -----~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~  197 (263)
                           ...+..|.||            |+||.||+||||.||+.-|...
T Consensus       590 neitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~  638 (752)
T KOG0670|consen  590 NEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGR  638 (752)
T ss_pred             ccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCC
Confidence                 1235668999            9999999999999999988743

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.90  E-value=5.9e-24  Score=160.71  Aligned_cols=165  Identities=21%  Similarity=0.222  Sum_probs=138.0

Q ss_pred             cccccccceecccCceEEEEEE-ecCCceEEEEEeecC-CCchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCeeEEEE
Q 039276           31 LFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQ-YGGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~-~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      .++......||+|++|.|-+-+ .++|.-.|+|.+... ..+..+++.+|+.+.... ..|.+|.++|.+.+.+..++.|
T Consensus        45 ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcM  124 (282)
T KOG0984|consen   45 ADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICM  124 (282)
T ss_pred             hhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeH
Confidence            3557778889999999988887 778999999999765 344567778888776655 7899999999999999999999


Q ss_pred             eccCCCCHhhhhhh---CCCcccHHHHHHHHHHHHHHHHHhccC-CccccccCCCcccccccc-----------------
Q 039276          108 ECMPHGSLGKCLST---SNYILDFFQRLHIMIDVASAVEYLHFG-HSTHLLLKEDQSLTQIQT-----------------  166 (263)
Q Consensus       108 e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~h~dlk~~nil~~~~~-----------------  166 (263)
                      |.|.. +|..+-..   .+...++.-+-+|+-.++.||.|||++ .++|||+||+|||++..+                 
T Consensus       125 E~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSi  203 (282)
T KOG0984|consen  125 ELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSI  203 (282)
T ss_pred             HHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhhh
Confidence            99955 88776543   334489999999999999999999987 699999999999954432                 


Q ss_pred             -----cccccccCc----------------chhhHHHHHHHHHhCCCCCcc
Q 039276          167 -----LATISYMAP----------------DTYNFGIMIMETFSGKKPTIK  196 (263)
Q Consensus       167 -----~g~~~y~aP----------------Dv~SlG~il~ell~g~~Pf~~  196 (263)
                           .|-..|+||                ||||||+.+.||.+++.||+.
T Consensus       204 Akt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~  254 (282)
T KOG0984|consen  204 AKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYES  254 (282)
T ss_pred             HHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccc
Confidence                 456679999                999999999999999999864

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.89  E-value=1.1e-24  Score=171.21  Aligned_cols=163  Identities=20%  Similarity=0.262  Sum_probs=134.9

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecCC-----ee
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDD-----FK  103 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-----~~  103 (263)
                      .+.+-.+.||-|+||.||..+ -.+|+.|++|++...-  --..+++.+|+.++..++|.|++..++..+-..     ..
T Consensus        53 ~Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEi  132 (449)
T KOG0664|consen   53 QDIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQEL  132 (449)
T ss_pred             ccCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHH
Confidence            457788999999999999988 4569999999886542  234677888999999999999999888876442     46


Q ss_pred             EEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc-----------------
Q 039276          104 ALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT-----------------  166 (263)
Q Consensus       104 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~-----------------  166 (263)
                      |+++|.+.. +|-+.+-+.. .++...++-++.||+.||+|||+.+|.||||||.|.+.+++-                 
T Consensus       133 YV~TELmQS-DLHKIIVSPQ-~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~  210 (449)
T KOG0664|consen  133 YVLTELMQS-DLHKIIVSPQ-ALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRD  210 (449)
T ss_pred             HHHHHHHHh-hhhheeccCC-CCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchhh
Confidence            788898855 8887776544 378888889999999999999999999999999999965531                 


Q ss_pred             -------cccccccCc-------------chhhHHHHHHHHHhCCCCCcc
Q 039276          167 -------LATISYMAP-------------DTYNFGIMIMETFSGKKPTIK  196 (263)
Q Consensus       167 -------~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~  196 (263)
                             +.|..|+||             ||||.|||+.||+.++..|..
T Consensus       211 ~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQA  260 (449)
T KOG0664|consen  211 RLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQA  260 (449)
T ss_pred             hhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhc
Confidence                   347779999             999999999999999988863

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.89  E-value=5.4e-24  Score=167.37  Aligned_cols=210  Identities=20%  Similarity=0.337  Sum_probs=160.6

Q ss_pred             ccccceecccCceEEEEEEecCCceEEEEEeecCCCc--hHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccC
Q 039276           34 FSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGG--AFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMP  111 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~--~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~  111 (263)
                      .....+|.....|+.|+|+|+ |..+++|++...+..  ....+..|+-.++.+.||||..+++.|.....+.++..|+|
T Consensus       192 lnl~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp  270 (448)
T KOG0195|consen  192 LNLITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMP  270 (448)
T ss_pred             hhhhhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeecc
Confidence            455667888899999999999 778888988766432  23346778889999999999999999999999999999999


Q ss_pred             CCCHhhhhhhCCCc-ccHHHHHHHHHHHHHHHHHhccCC--ccccccCCCccccccc------------------ccccc
Q 039276          112 HGSLGKCLSTSNYI-LDFFQRLHIMIDVASAVEYLHFGH--STHLLLKEDQSLTQIQ------------------TLATI  170 (263)
Q Consensus       112 ~~~L~~~l~~~~~~-~~~~~~~~i~~~i~~~l~~lH~~~--i~h~dlk~~nil~~~~------------------~~g~~  170 (263)
                      .|+|...+.+.... .+..++.+++.+++.|++|||+..  |..--|....++++..                  ..-++
T Consensus       271 ~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsfqe~gr~y~p  350 (448)
T KOG0195|consen  271 FGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQEVGRAYSP  350 (448)
T ss_pred             chHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeeeeccccccCc
Confidence            99999999875433 777889999999999999999764  2223344444443221                  12367


Q ss_pred             cccCc---------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccch
Q 039276          171 SYMAP---------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTK  235 (263)
Q Consensus       171 ~y~aP---------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (263)
                      .|++|               |+|||++++|||.|+.+||.+...-+-.             +++.      -++.+...+
T Consensus       351 awmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecg-------------mkia------leglrv~ip  411 (448)
T KOG0195|consen  351 AWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECG-------------MKIA------LEGLRVHIP  411 (448)
T ss_pred             ccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhh-------------hhhh------hccccccCC
Confidence            78998               9999999999999999999753221111             1111      123334457


Q ss_pred             HHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          236 EQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       236 ~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ++++..+..++.-|++.||.+||.++.|
T Consensus       412 pgis~hm~klm~icmnedpgkrpkfdmi  439 (448)
T KOG0195|consen  412 PGISRHMNKLMNICMNEDPGKRPKFDMI  439 (448)
T ss_pred             CCccHHHHHHHHHHhcCCCCcCCCccee
Confidence            7888889999999999999999998754

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.88  E-value=1.4e-23  Score=196.63  Aligned_cols=155  Identities=17%  Similarity=0.220  Sum_probs=110.9

Q ss_pred             CC-CcceeEeeEee-------cCCeeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCC
Q 039276           86 RH-QNLIKIISSCS-------KDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKE  157 (263)
Q Consensus        86 ~h-~~i~~~~~~~~-------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~  157 (263)
                      +| .||+.+++++.       ....++.++|++ +++|.+++......+++..++.++.||+.||.|||+++|+||||||
T Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP  108 (793)
T PLN00181         30 SHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRP  108 (793)
T ss_pred             hHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCc
Confidence            44 46777777662       223456778877 5599999976555589999999999999999999999999999999


Q ss_pred             Ccccccc-------------------c---------------------------------------ccccccccCc----
Q 039276          158 DQSLTQI-------------------Q---------------------------------------TLATISYMAP----  175 (263)
Q Consensus       158 ~nil~~~-------------------~---------------------------------------~~g~~~y~aP----  175 (263)
                      +|||+..                   .                                       ..||+.|+||    
T Consensus       109 ~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~  188 (793)
T PLN00181        109 SCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDN  188 (793)
T ss_pred             hhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhc
Confidence            9999731                   0                                       1356679999    


Q ss_pred             --------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhc
Q 039276          176 --------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAM  247 (263)
Q Consensus       176 --------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  247 (263)
                              |||||||++|||+++..|+....   ..+..+...             ..+.      .......+..+++.
T Consensus       189 ~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~---~~~~~~~~~-------------~~~~------~~~~~~~~~~~~~~  246 (793)
T PLN00181        189 GSSSNCASDVYRLGVLLFELFCPVSSREEKS---RTMSSLRHR-------------VLPP------QILLNWPKEASFCL  246 (793)
T ss_pred             cCCCCchhhhhhHHHHHHHHhhCCCchhhHH---HHHHHHHHh-------------hcCh------hhhhcCHHHHHHHH
Confidence                    99999999999999988864210   011111000             0000      00111233567888


Q ss_pred             cccccCcCCCCCccCC
Q 039276          248 ECTVESPNQRINAKEM  263 (263)
Q Consensus       248 ~cl~~~p~~Rpt~~ev  263 (263)
                      +||+.+|.+|||+.||
T Consensus       247 ~~L~~~P~~Rps~~ei  262 (793)
T PLN00181        247 WLLHPEPSCRPSMSEL  262 (793)
T ss_pred             HhCCCChhhCcChHHH
Confidence            9999999999999875

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.88  E-value=1.9e-23  Score=189.73  Aligned_cols=202  Identities=20%  Similarity=0.245  Sum_probs=150.8

Q ss_pred             cccccceecccCceEEEEEEecCCceEEEEEeecCC-CchHHHHHHHHHH--HhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           33 LFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQY-GGAFKNLDVECNM--MKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~-~~~~~~~~~e~~~--l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      .+...+.||++.|=+|.+|....|. |+||++-... .-....+.++++-  ....++||++++.-+.......|+|-+|
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqy  102 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQY  102 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence            4778889999999999999977676 9999997764 2334444443332  4445899999998887788888999999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc-----------------------
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT-----------------------  166 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~-----------------------  166 (263)
                      ..+ +|.+.+..+.. +...+.++|+.|++.||.-+|..||+|||||.+|||+.+--                       
T Consensus       103 vkh-nLyDRlSTRPF-L~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPadf  180 (1431)
T KOG1240|consen  103 VKH-NLYDRLSTRPF-LVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPADF  180 (1431)
T ss_pred             Hhh-hhhhhhccchH-HHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCCCCcccc
Confidence            977 99999987766 77888899999999999999999999999999999943310                       


Q ss_pred             -------cccccccCc-----------------------chhhHHHHHHHHHh-CCCCCccc-----cCCCchhhhHhhh
Q 039276          167 -------LATISYMAP-----------------------DTYNFGIMIMETFS-GKKPTIKF-----FHGEMTLKHWVND  210 (263)
Q Consensus       167 -------~g~~~y~aP-----------------------Dv~SlG~il~ell~-g~~Pf~~~-----~~~~~~~~~~~~~  210 (263)
                             ..-.-|+||                       ||||+||++.||++ |++||.-.     ..+..        
T Consensus       181 ~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~~--------  252 (1431)
T KOG1240|consen  181 TFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGNA--------  252 (1431)
T ss_pred             eEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccCc--------
Confidence                   001125565                       99999999999999 78888621     11100        


Q ss_pred             cCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccC
Q 039276          211 LLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKE  262 (263)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~e  262 (263)
                      ..++...+.+.                 +..++++++.|++.||++|.++++
T Consensus       253 ~~~e~~Le~Ie-----------------d~~~Rnlil~Mi~rdPs~RlSAed  287 (1431)
T KOG1240|consen  253 DDPEQLLEKIE-----------------DVSLRNLILSMIQRDPSKRLSAED  287 (1431)
T ss_pred             cCHHHHHHhCc-----------------CccHHHHHHHHHccCchhccCHHH
Confidence            01111111110                 113899999999999999999875

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.88  E-value=1.5e-22  Score=156.16  Aligned_cols=132  Identities=19%  Similarity=0.198  Sum_probs=97.3

Q ss_pred             CCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc----------------ccccccccCc-
Q 039276          113 GSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ----------------TLATISYMAP-  175 (263)
Q Consensus       113 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~----------------~~g~~~y~aP-  175 (263)
                      |+|.+++...+..+++..++.++.|++.||+|||+++      ||+||+.+.+                ..|++.|+|| 
T Consensus         1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~fG~~~~~~~~~~~g~~~y~aPE   74 (176)
T smart00750        1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKLDGSVAFKTPEQSRVDPYFMAPE   74 (176)
T ss_pred             CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceeeccceEeeccccCCCcccccChH
Confidence            6899999876656999999999999999999999998      9999985432                2578999999 


Q ss_pred             -----------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHHHHH--HH
Q 039276          176 -----------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMS--FV  242 (263)
Q Consensus       176 -----------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l  242 (263)
                                 |||||||++|||++|+.||.........+..+......             ...........+++  ++
T Consensus        75 ~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~  141 (176)
T smart00750       75 VIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPA-------------DDPRDRSNLESVSAARSF  141 (176)
T ss_pred             HhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhcc-------------CCccccccHHHHHhhhhH
Confidence                       99999999999999999986432222222222211111             11111112334444  69


Q ss_pred             HHhhccccccCcCCCCCccCC
Q 039276          243 FNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       243 ~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .+++.+||..+|.+|||+.||
T Consensus       142 ~~~i~~cl~~~p~~Rp~~~~l  162 (176)
T smart00750      142 ADFMRVCASRLPQRREAANHY  162 (176)
T ss_pred             HHHHHHHHhcccccccCHHHH
Confidence            999999999999999998764

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.84  E-value=5.3e-20  Score=155.32  Aligned_cols=164  Identities=21%  Similarity=0.248  Sum_probs=135.0

Q ss_pred             cccccceecccCceEEEEEEecC--CceEEEEEeecCCCchHHHHHHHHHHHhhcCC----CcceeEeeEe-ecCCeeEE
Q 039276           33 LFSESNLISRGGFGSIYKAKIQD--GMEVVVKGFNLQYGGAFKNLDVECNMMKIIRH----QNLIKIISSC-SKDDFKAL  105 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~~~--~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h----~~i~~~~~~~-~~~~~~~l  105 (263)
                      .|...+.||+|+||.||.+....  ...+|+|............+..|+.++..+..    .++..+++.. ....+.|+
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i   98 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI   98 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence            59999999999999999999543  24788888776533333377789998888862    6888888888 47778899


Q ss_pred             EEeccCCCCHhhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc--------------------
Q 039276          106 ILECMPHGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI--------------------  164 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~--------------------  164 (263)
                      ||+.+ |.+|.++..... +.++......++.|++.+|+++|+.|++||||||+|++...                    
T Consensus        99 VM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~  177 (322)
T KOG1164|consen   99 VMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRF  177 (322)
T ss_pred             EEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCccc
Confidence            99977 779999886554 55999999999999999999999999999999999988321                    


Q ss_pred             ------------------cccccccccCc------------chhhHHHHHHHHHhCCCCCccc
Q 039276          165 ------------------QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKF  197 (263)
Q Consensus       165 ------------------~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~  197 (263)
                                        ...||..|.++            |+||++.++.|++.|..||...
T Consensus       178 ~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~  240 (322)
T KOG1164|consen  178 KYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEAL  240 (322)
T ss_pred             cccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccc
Confidence                              11377788887            9999999999999999998654

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.82  E-value=3.1e-20  Score=143.81  Aligned_cols=166  Identities=21%  Similarity=0.253  Sum_probs=137.3

Q ss_pred             cccccccceecccCceEEEEEE-ecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCC-CcceeEeeEeecCCeeEEEEe
Q 039276           31 LFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRH-QNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h-~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      ...|...++||+|+||.+|.|. ..+|..||+|.-+....  -..+.-|..+...+++ .++..+..+..+..+-.+||+
T Consensus        14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~--hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMd   91 (341)
T KOG1163|consen   14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK--HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMD   91 (341)
T ss_pred             ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC--CcchhHHHHHHHHhccCCCCchhhhhccccccceeeee
Confidence            3569999999999999999999 78899999998765532  2345668888888865 566666666677778899999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc------------------------
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI------------------------  164 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~------------------------  164 (263)
                      .. +.+|.++..-..+.++....+-++-|++.-++|+|.++++||||||+|++...                        
T Consensus        92 LL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~  170 (341)
T KOG1163|consen   92 LL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTR  170 (341)
T ss_pred             cc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhcccccc
Confidence            87 78999988866666898999999999999999999999999999999999322                        


Q ss_pred             ---------cccccccccCc------------chhhHHHHHHHHHhCCCCCccccC
Q 039276          165 ---------QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFH  199 (263)
Q Consensus       165 ---------~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~  199 (263)
                               +-.||..|.|-            |+-|+|.+|.+.--|..||.....
T Consensus       171 ~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka  226 (341)
T KOG1163|consen  171 QHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKA  226 (341)
T ss_pred             ccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccch
Confidence                     23577777765            999999999999999999986543

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.81  E-value=3.4e-21  Score=173.02  Aligned_cols=215  Identities=18%  Similarity=0.153  Sum_probs=151.8

Q ss_pred             cccceecccCceEEEEEEe-cCCceEEEEEee----c-CCC-chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           35 SESNLISRGGFGSIYKAKI-QDGMEVVVKGFN----L-QYG-GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        35 ~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~----~-~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      ...+.+|.|.+|.++.... .....+..|.+.    . ... .....+..|..+-..+.|+|++.....+.+.....-.|
T Consensus       321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m  400 (601)
T KOG0590|consen  321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM  400 (601)
T ss_pred             CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence            4677899999997766652 223334444332    1 111 11222556777888889999988777776654444459


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-----------------------
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-----------------------  164 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-----------------------  164 (263)
                      |||++ +|..++....+ +....+-.++.|++.|+.|+|+.|+.|||+|++|++...                       
T Consensus       401 E~~~~-Dlf~~~~~~~~-~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~  478 (601)
T KOG0590|consen  401 EYCPY-DLFSLVMSNGK-LTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNI  478 (601)
T ss_pred             hcccH-HHHHHHhcccc-cchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCcchhh
Confidence            99999 99999987644 777888899999999999999999999999999998332                       


Q ss_pred             ----cccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccc
Q 039276          165 ----QTLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSR  227 (263)
Q Consensus       165 ----~~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (263)
                          ...|+..|+||             ||||.|++++.|.+|+.||......+..+...            ........
T Consensus       479 ~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~------------~~~~~~~~  546 (601)
T KOG0590|consen  479 HESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTN------------NYSDQRNI  546 (601)
T ss_pred             hhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhh------------cccccccc
Confidence                33678889999             99999999999999999987654333332000            00000001


Q ss_pred             ccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          228 EDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       228 ~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ..+.......++.+-+.++.+||+++|.+|.|+++|
T Consensus       547 ~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i  582 (601)
T KOG0590|consen  547 FEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQI  582 (601)
T ss_pred             ccChHHHHHhchhhHHHHHHHHccCChhheecHHHH
Confidence            111112234566678999999999999999999875

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.80  E-value=4.4e-19  Score=143.21  Aligned_cols=162  Identities=17%  Similarity=0.210  Sum_probs=140.5

Q ss_pred             cccccceecccCceEEEEEE-ecCCceEEEEEeecCCCchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCeeEEEEecc
Q 039276           33 LFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      .|..+++||.|+||.++.|. .-++++||||.-..+.  ...++..|.+..+.+ ..++|..++-+.+.+.+-.+|+|.+
T Consensus        29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL  106 (449)
T KOG1165|consen   29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL  106 (449)
T ss_pred             cceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh
Confidence            49999999999999999999 6679999999765553  445677899988888 4699999988888888888999988


Q ss_pred             CCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-------------------------
Q 039276          111 PHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-------------------------  165 (263)
Q Consensus       111 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-------------------------  165 (263)
                       |.+|.++..-.++.++.....-++.|++.-++|+|++.+|.|||||+|+|+...                         
T Consensus       107 -GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~Tk  185 (449)
T KOG1165|consen  107 -GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTK  185 (449)
T ss_pred             -CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCcccc
Confidence             779999988777779999999999999999999999999999999999995332                         


Q ss_pred             ----------ccccccccCc------------chhhHHHHHHHHHhCCCCCccc
Q 039276          166 ----------TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKF  197 (263)
Q Consensus       166 ----------~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~  197 (263)
                                -.||..||+-            |+-|||-++.+-+-|..||...
T Consensus       186 qHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGL  239 (449)
T KOG1165|consen  186 QHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGL  239 (449)
T ss_pred             ccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccc
Confidence                      1467778776            9999999999999999999864

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.78  E-value=8.3e-19  Score=138.79  Aligned_cols=147  Identities=8%  Similarity=0.034  Sum_probs=112.2

Q ss_pred             ccccccceecccCceEEEEEEecCCceEEEEEeecCCCchHH---H------HHHHHHHHhhcCCCcceeEeeEeecC--
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFK---N------LDVECNMMKIIRHQNLIKIISSCSKD--  100 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~---~------~~~e~~~l~~~~h~~i~~~~~~~~~~--  100 (263)
                      .+|...+.+|.|+||.||+... ++..+|+|.+.........   .      +.+|+..+.++.|+++....+++.+.  
T Consensus        31 ~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~  109 (232)
T PRK10359         31 YNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAER  109 (232)
T ss_pred             CceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeeccc
Confidence            4699999999999999999765 4778999999765322222   2      57889999999999999998886532  


Q ss_pred             ------CeeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccccc------c
Q 039276          101 ------DFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQTL------A  168 (263)
Q Consensus       101 ------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~~------g  168 (263)
                            +..+++|||++|.+|.++..     .+.    ....+++.++..+|..|++|+|++|.|++....+.      +
T Consensus       110 ~~~~~~~~~~lvmEyi~G~tL~~~~~-----~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~gi~liDfg~  180 (232)
T PRK10359        110 KTLRYAHTYIMLIEYIEGVELNDMPE-----ISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVSKNGLRIIDLSG  180 (232)
T ss_pred             ccccccCCeEEEEEEECCccHHHhhh-----ccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEeCCCEEEEECCC
Confidence                  35789999999999988742     232    24569999999999999999999999999764321      1


Q ss_pred             cccc----------------cCcchhhHHHHHHHHH
Q 039276          169 TISY----------------MAPDTYNFGIMIMETF  188 (263)
Q Consensus       169 ~~~y----------------~aPDv~SlG~il~ell  188 (263)
                      +..+                +.||+||||+.+....
T Consensus       181 ~~~~~e~~a~d~~vler~y~~~~di~~lg~~~~~~~  216 (232)
T PRK10359        181 KRCTAQRKAKDRIDLERHYGIKNEIKDLGYYLLIYK  216 (232)
T ss_pred             cccccchhhHHHHHHHhHhcccccccceeEeehHHH
Confidence            1111                2349999999876654

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.78  E-value=3.3e-18  Score=144.89  Aligned_cols=121  Identities=17%  Similarity=0.101  Sum_probs=95.6

Q ss_pred             cccccccceecccCceEEEEEEec--CCceEEEEEeecC-----CCchHHHHHHHHHHHhhcCCCccee-EeeEeecCCe
Q 039276           31 LFLFSESNLISRGGFGSIYKAKIQ--DGMEVVVKGFNLQ-----YGGAFKNLDVECNMMKIIRHQNLIK-IISSCSKDDF  102 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~~--~~~~v~vK~~~~~-----~~~~~~~~~~e~~~l~~~~h~~i~~-~~~~~~~~~~  102 (263)
                      ...|...+.||+|+||+||+|...  +++.+|||++...     .......+.+|+++++.++|+|+++ ++++    +.
T Consensus        17 ~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~----~~   92 (365)
T PRK09188         17 SARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT----GK   92 (365)
T ss_pred             cCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc----CC
Confidence            356999999999999999999843  4777899987533     1223556889999999999999985 4432    45


Q ss_pred             eEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCcccccc-CCCccccc
Q 039276          103 KALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLL-KEDQSLTQ  163 (263)
Q Consensus       103 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dl-k~~nil~~  163 (263)
                      .|++|||+++++|.. ...    ..   ...++.+++.+|+|||.+|++|||| ||+||+.+
T Consensus        93 ~~LVmE~~~G~~L~~-~~~----~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~  146 (365)
T PRK09188         93 DGLVRGWTEGVPLHL-ARP----HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMG  146 (365)
T ss_pred             cEEEEEccCCCCHHH-hCc----cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEc
Confidence            799999999999963 211    11   1457889999999999999999999 99999964

>PRK10345 hypothetical protein; Provisional

Probab=99.77  E-value=3.8e-18  Score=134.39  Aligned_cols=125  Identities=15%  Similarity=0.164  Sum_probs=99.7

Q ss_pred             ccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhc-----CCCcceeEeeEeecCC---eeE-
Q 039276           34 FSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKII-----RHQNLIKIISSCSKDD---FKA-  104 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~-----~h~~i~~~~~~~~~~~---~~~-  104 (263)
                      +....+||+|+++.||. ...++.+ +||++........+.+.+|+..++.+     +||||+++++++.+..   ..+ 
T Consensus         4 L~~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~   81 (210)
T PRK10345          4 LSEQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD   81 (210)
T ss_pred             cCCcceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence            45577899999999996 4334555 68988766455567789999999999     5799999999998763   434 


Q ss_pred             EEEec--cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHH-HHhccCCccccccCCCcccccc
Q 039276          105 LILEC--MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAV-EYLHFGHSTHLLLKEDQSLTQI  164 (263)
Q Consensus       105 lv~e~--~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l-~~lH~~~i~h~dlk~~nil~~~  164 (263)
                      +|+||  +++++|.+++++..  +++.  ..++.+++.++ +|||+++|+||||||+||+...
T Consensus        82 ~I~e~~G~~~~tL~~~l~~~~--~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~  140 (210)
T PRK10345         82 VIADFDGKPSITLTEFAEQCR--YEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQR  140 (210)
T ss_pred             EEecCCCCcchhHHHHHHccc--ccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEec
Confidence            78999  66799999997642  5544  35677888887 9999999999999999999864

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.77  E-value=3.5e-18  Score=133.19  Aligned_cols=124  Identities=16%  Similarity=0.079  Sum_probs=94.1

Q ss_pred             cceecccCceEEEEEEecCCceEEEEEeecCCCc--h------------------------HHHHHHHHHHHhhcCCCcc
Q 039276           37 SNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGG--A------------------------FKNLDVECNMMKIIRHQNL   90 (263)
Q Consensus        37 ~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~--~------------------------~~~~~~e~~~l~~~~h~~i   90 (263)
                      .+.||+|++|.||+|...+|++||+|++......  .                        ......|++.+..+.++++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v   81 (190)
T cd05147           2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI   81 (190)
T ss_pred             CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            3579999999999999768999999999754211  1                        0122358999999987776


Q ss_pred             eeEeeEeecCCeeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHh-ccCCccccccCCCccccc
Q 039276           91 IKIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYL-HFGHSTHLLLKEDQSLTQ  163 (263)
Q Consensus        91 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~l-H~~~i~h~dlk~~nil~~  163 (263)
                      .........  ..++||||++++++....... ..++...+..++.|++.+|.++ |..+++||||||+||+.+
T Consensus        82 ~~p~~~~~~--~~~iVmE~i~g~~l~~~~~~~-~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~  152 (190)
T cd05147          82 PCPEPILLK--SHVLVMEFIGDDGWAAPRLKD-APLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH  152 (190)
T ss_pred             CCCcEEEec--CCEEEEEEeCCCCCcchhhhc-CCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE
Confidence            433322222  238999999987766543333 3478888999999999999999 799999999999999986

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.75  E-value=6.4e-17  Score=135.36  Aligned_cols=215  Identities=23%  Similarity=0.320  Sum_probs=158.1

Q ss_pred             ccccceecccCceEEEEEEecCCceEEEEEeecCCCc---hHHHHHHHHHHHhhcCCC-cceeEeeEeecCCeeEEEEec
Q 039276           34 FSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGG---AFKNLDVECNMMKIIRHQ-NLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~---~~~~~~~e~~~l~~~~h~-~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      |.....||.|+|+.||.+...  ..+++|.+......   ....+.+|+.++..+.|+ +++++.+.+......++++++
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~   79 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY   79 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence            566788999999999999866  77889998766332   366788899999999888 799999999777778999999


Q ss_pred             cCCCCHhhhhhhCCC--cccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-----------------------
Q 039276          110 MPHGSLGKCLSTSNY--ILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-----------------------  164 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-----------------------  164 (263)
                      +.++++.+++.....  .+.......++.|++.+++|+|..+++|||+||+|++...                       
T Consensus        80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~  159 (384)
T COG0515          80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTS  159 (384)
T ss_pred             CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCccc
Confidence            999999977776541  4788889999999999999999999999999999998432                       


Q ss_pred             -------cccccccccCc---------------chhhHHHHHHHHHhCCCCCccccCC---CchhhhHhhhcCCCchhhh
Q 039276          165 -------QTLATISYMAP---------------DTYNFGIMIMETFSGKKPTIKFFHG---EMTLKHWVNDLLPNSVMKV  219 (263)
Q Consensus       165 -------~~~g~~~y~aP---------------Dv~SlG~il~ell~g~~Pf~~~~~~---~~~~~~~~~~~~~~~~~~~  219 (263)
                             ...|+..|++|               |+||+|++++++++|..||......   ............+ .....
T Consensus       160 ~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  238 (384)
T COG0515         160 SIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTP-SLASP  238 (384)
T ss_pred             cccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCc-ccccc
Confidence                   22455666666               9999999999999999996543321   1111111111111 00000


Q ss_pred             hhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCcc
Q 039276          220 VSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAK  261 (263)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~  261 (263)
                      ....          ........+.+++.+|+..+|..|.+..
T Consensus       239 ~~~~----------~~~~~~~~~~~~~~~~~~~~~~~r~~~~  270 (384)
T COG0515         239 LSPS----------NPELISKAASDLLKKLLAKDPKNRLSSS  270 (384)
T ss_pred             cCcc----------ccchhhHHHHHHHHHHHhcCchhcCCHH
Confidence            0000          0022234578899999999999998764

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.73  E-value=5.4e-17  Score=126.75  Aligned_cols=124  Identities=19%  Similarity=0.107  Sum_probs=94.5

Q ss_pred             cceecccCceEEEEEEecCCceEEEEEeecCCCc--h------------------------HHHHHHHHHHHhhcCCCcc
Q 039276           37 SNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGG--A------------------------FKNLDVECNMMKIIRHQNL   90 (263)
Q Consensus        37 ~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~--~------------------------~~~~~~e~~~l~~~~h~~i   90 (263)
                      .+.||+|++|.||+|...+|+.||||++......  .                        ......|++.+.++.|+++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   81 (190)
T cd05145           2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV   81 (190)
T ss_pred             CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            4679999999999999668999999999765211  0                        1123468889999988887


Q ss_pred             eeEeeEeecCCeeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhcc-CCccccccCCCccccc
Q 039276           91 IKIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHF-GHSTHLLLKEDQSLTQ  163 (263)
Q Consensus        91 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~-~~i~h~dlk~~nil~~  163 (263)
                      .....+...  ..+++|||++++++....... ...+......++.|++.++.++|. .|++|+||||+||+.+
T Consensus        82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~-~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~  152 (190)
T cd05145          82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLKD-VPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH  152 (190)
T ss_pred             CCceEEEec--CCEEEEEEecCCCchhhhhhh-ccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE
Confidence            544333322  248999999887554332222 236778889999999999999999 9999999999999986

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.73  E-value=9.7e-17  Score=130.78  Aligned_cols=198  Identities=19%  Similarity=0.243  Sum_probs=123.5

Q ss_pred             ccccceecccCceEEEEEEec-CCceEEEEEeecCCC---chHHHHHHHHHHHhhcC----------CCcceeEeeEeec
Q 039276           34 FSESNLISRGGFGSIYKAKIQ-DGMEVVVKGFNLQYG---GAFKNLDVECNMMKIIR----------HQNLIKIISSCSK   99 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~~-~~~~v~vK~~~~~~~---~~~~~~~~e~~~l~~~~----------h~~i~~~~~~~~~   99 (263)
                      +..++.||.|+++.||.++.. +++++++|++.....   ...+.+.+|.-....+.          |-.++...+....
T Consensus        14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i   93 (288)
T PF14531_consen   14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI   93 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred             EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence            677889999999999999955 589999999976532   23445555554443322          2222222222211


Q ss_pred             ---------C---C-----eeEEEEeccCCCCHhhhhhh---CCC---cccHHHHHHHHHHHHHHHHHhccCCccccccC
Q 039276          100 ---------D---D-----FKALILECMPHGSLGKCLST---SNY---ILDFFQRLHIMIDVASAVEYLHFGHSTHLLLK  156 (263)
Q Consensus       100 ---------~---~-----~~~lv~e~~~~~~L~~~l~~---~~~---~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk  156 (263)
                               .   .     ..+++|.-+. ++|.+++..   ...   ......+..+-.|+++.+++||+.|++|+||+
T Consensus        94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~  172 (288)
T PF14531_consen   94 PGKPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIK  172 (288)
T ss_dssp             TTS-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-S
T ss_pred             cCCCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccc
Confidence                     1   1     1256777664 488777542   211   13444556677899999999999999999999


Q ss_pred             CCcccccccc--------------------cccccccCc--------------------chhhHHHHHHHHHhCCCCCcc
Q 039276          157 EDQSLTQIQT--------------------LATISYMAP--------------------DTYNFGIMIMETFSGKKPTIK  196 (263)
Q Consensus       157 ~~nil~~~~~--------------------~g~~~y~aP--------------------Dv~SlG~il~ell~g~~Pf~~  196 (263)
                      |+|++.+.++                    ..+..|.+|                    |.|+||+++|.|++++.||..
T Consensus       173 ~~nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~  252 (288)
T PF14531_consen  173 PENFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGL  252 (288)
T ss_dssp             GGGEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCC
T ss_pred             eeeEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCC
Confidence            9999955432                    123335555                    999999999999999999874


Q ss_pred             ccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCC
Q 039276          197 FFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQR  257 (263)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~R  257 (263)
                      .........                         .+.....+++.+..||..+|+.||.+|
T Consensus       253 ~~~~~~~~~-------------------------~f~~C~~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  253 SSPEADPEW-------------------------DFSRCRDMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             CGGGSTSGG-------------------------GGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred             CCccccccc-------------------------cchhcCCcCHHHHHHHHHHccCCcccC
Confidence            321111000                         111223777889999999999999998

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.72  E-value=2e-17  Score=136.68  Aligned_cols=154  Identities=23%  Similarity=0.312  Sum_probs=114.9

Q ss_pred             CCCcceeEeeEeecC---------------------------CeeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHH
Q 039276           86 RHQNLIKIISSCSKD---------------------------DFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDV  138 (263)
Q Consensus        86 ~h~~i~~~~~~~~~~---------------------------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i  138 (263)
                      +||||+++.++|.++                           ...|+||..++. +|+.++..+..  +.....-++.|+
T Consensus       274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~~--s~r~~~~~laQl  350 (598)
T KOG4158|consen  274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRHR--SYRTGRVILAQL  350 (598)
T ss_pred             CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCCC--chHHHHHHHHHH
Confidence            699999999988541                           257899998866 99999987653  344445588999


Q ss_pred             HHHHHHhccCCccccccCCCccccccc---------------------------------ccccccccCc----------
Q 039276          139 ASAVEYLHFGHSTHLLLKEDQSLTQIQ---------------------------------TLATISYMAP----------  175 (263)
Q Consensus       139 ~~~l~~lH~~~i~h~dlk~~nil~~~~---------------------------------~~g~~~y~aP----------  175 (263)
                      ++|+.|||.+|+.|||+|.+||++.-+                                 ..|....|||          
T Consensus       351 LEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~  430 (598)
T KOG4158|consen  351 LEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPN  430 (598)
T ss_pred             HHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCc
Confidence            999999999999999999999993221                                 1233445777          


Q ss_pred             --------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhc
Q 039276          176 --------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAM  247 (263)
Q Consensus       176 --------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  247 (263)
                              |.|+.|.+.||+++...||...  ++..+.        .+.        +. +..-+..+..|++.+++++.
T Consensus       431 avvny~kAD~WA~GalaYEIfg~~NPFY~r--Gem~L~--------~r~--------Yq-e~qLPalp~~vpp~~rqlV~  491 (598)
T KOG4158|consen  431 AVVNYEKADTWAAGALAYEIFGRSNPFYKR--GEMLLD--------TRT--------YQ-ESQLPALPSRVPPVARQLVF  491 (598)
T ss_pred             eeeccchhhhhhhhhhHHHHhccCCccccc--chheec--------hhh--------hh-hhhCCCCcccCChHHHHHHH
Confidence                    9999999999999999999752  222111        000        00 11112346778888999999


Q ss_pred             cccccCcCCCCCcc
Q 039276          248 ECTVESPNQRINAK  261 (263)
Q Consensus       248 ~cl~~~p~~Rpt~~  261 (263)
                      ..|+.||++|++..
T Consensus       492 ~lL~r~pskRvsp~  505 (598)
T KOG4158|consen  492 DLLKRDPSKRVSPN  505 (598)
T ss_pred             HHhcCCccccCCcc
Confidence            99999999999864

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.67  E-value=1.9e-17  Score=143.77  Aligned_cols=195  Identities=19%  Similarity=0.239  Sum_probs=152.9

Q ss_pred             ecccCceEEEEEEe----cCCceEEEEEeecCCC--chHHHHHHHHHHHhhcC-CCcceeEeeEeecCCeeEEEEeccCC
Q 039276           40 ISRGGFGSIYKAKI----QDGMEVVVKGFNLQYG--GAFKNLDVECNMMKIIR-HQNLIKIISSCSKDDFKALILECMPH  112 (263)
Q Consensus        40 lg~g~~g~v~~~~~----~~~~~v~vK~~~~~~~--~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~lv~e~~~~  112 (263)
                      +|+|.+|+|++++.    ..+.-+++|++.+...  ........|-.++...+ |+.++++.-.++.....++++++..+
T Consensus         2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg   81 (612)
T KOG0603|consen    2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG   81 (612)
T ss_pred             CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence            68999999998762    2366788888866522  22224445666777775 99999999999999999999999999


Q ss_pred             CCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc-------------------ccccccc
Q 039276          113 GSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT-------------------LATISYM  173 (263)
Q Consensus       113 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~-------------------~g~~~y~  173 (263)
                      |.+...+..... +.+.....+...++.+++.+|..+++++|+|++||+....+                   .|+..||
T Consensus        82 g~lft~l~~~~~-f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~cgt~eym  160 (612)
T KOG0603|consen   82 GDLFTRLSKEVM-FDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIACGTYEYR  160 (612)
T ss_pred             chhhhccccCCc-hHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhhhhcccchhhh
Confidence            999888776555 67777788899999999999999999999999999955433                   5799999


Q ss_pred             Cc----------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHHHHHHHH
Q 039276          174 AP----------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVF  243 (263)
Q Consensus       174 aP----------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  243 (263)
                      ||          |.||||++++||+||..||..                  +....+..       .....+...+..+.
T Consensus       161 ApEI~~gh~~a~D~ws~gvl~felltg~~pf~~------------------~~~~~Il~-------~~~~~p~~l~~~a~  215 (612)
T KOG0603|consen  161 APEIINGHLSAADWWSFGVLAFELLTGTLPFGG------------------DTMKRILK-------AELEMPRELSAEAR  215 (612)
T ss_pred             hhHhhhccCCcccchhhhhhHHHHhhCCCCCch------------------HHHHHHhh-------hccCCchhhhHHHH
Confidence            99          999999999999999999863                  11111111       11235778888899


Q ss_pred             HhhccccccCcCCCCCc
Q 039276          244 NLAMECTVESPNQRINA  260 (263)
Q Consensus       244 ~l~~~cl~~~p~~Rpt~  260 (263)
                      +++..++..+|..|.-.
T Consensus       216 ~~~~~l~~r~p~nrLg~  232 (612)
T KOG0603|consen  216 SLFRQLFKRNPENRLGA  232 (612)
T ss_pred             HHHHHHHhhCHHHHhcc
Confidence            99999999999888644

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.65  E-value=3.5e-15  Score=116.04  Aligned_cols=149  Identities=13%  Similarity=0.069  Sum_probs=114.2

Q ss_pred             cccceecccCceEEEEEEecCCceEEEEEeecCCC--c--hHHHHHHHHHHHhhcC-CCcceeEeeEeecCCeeEEEEec
Q 039276           35 SESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYG--G--AFKNLDVECNMMKIIR-HQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        35 ~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~--~--~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      .....|++|+||+|+.+.. .+.+++.+.+.....  .  ....+.+|+++++++. |+++++++++    +..+++|||
T Consensus         5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey   79 (218)
T PRK12274          5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY   79 (218)
T ss_pred             ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence            3467899999999997765 588888888876643  1  1224678999999995 5889988886    335999999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCcccccc-CCCcccccccc----------------------
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLL-KEDQSLTQIQT----------------------  166 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dl-k~~nil~~~~~----------------------  166 (263)
                      +.+.+|.+.....        ...++.|++.+|+++|.+|++|+|| ||+||+.+...                      
T Consensus        80 I~G~~L~~~~~~~--------~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~  151 (218)
T PRK12274         80 LAGAAMYQRPPRG--------DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRL  151 (218)
T ss_pred             ecCccHHhhhhhh--------hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHH
Confidence            9998886543211        1347789999999999999999999 79999964321                      


Q ss_pred             --------------cccccccCc--------------chhhHHHHHHHHHhCCCCCcc
Q 039276          167 --------------LATISYMAP--------------DTYNFGIMIMETFSGKKPTIK  196 (263)
Q Consensus       167 --------------~g~~~y~aP--------------Dv~SlG~il~ell~g~~Pf~~  196 (263)
                                    ..++.|++|              +.++-|+-+|.++|+..|+-.
T Consensus       152 L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~  209 (218)
T PRK12274        152 LAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE  209 (218)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence                          125556666              888999999999999998543

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.65  E-value=1.7e-15  Score=120.17  Aligned_cols=120  Identities=17%  Similarity=0.168  Sum_probs=98.9

Q ss_pred             ceecccCceEEEEEEecCCceEEEEEeecCCCc--------hHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           38 NLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGG--------AFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        38 ~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~--------~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      +.||+|++|.||+|.+ .+..+++|........        ....+.+|++++..+.|+++.....++.+....+++|||
T Consensus         2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~   80 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY   80 (211)
T ss_pred             cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence            5789999999999987 4788999987644221        123466799999999998887766666666778999999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccc
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQ  163 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~  163 (263)
                      +++++|.+++....    . ....++.+++.+|.++|..+++|+|++|.||+..
T Consensus        81 ~~G~~L~~~~~~~~----~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~  129 (211)
T PRK14879         81 IEGEPLKDLINSNG----M-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS  129 (211)
T ss_pred             eCCcCHHHHHHhcc----H-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE
Confidence            99999999886532    2 7788999999999999999999999999999986

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.64  E-value=5.5e-16  Score=134.19  Aligned_cols=170  Identities=24%  Similarity=0.307  Sum_probs=127.0

Q ss_pred             HhhcCCCcceeEeeEeecCCeeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCc-cccccCCCcc
Q 039276           82 MKIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHS-THLLLKEDQS  160 (263)
Q Consensus        82 l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i-~h~dlk~~ni  160 (263)
                      ++.+.|.|+.+++|.+.+++..++|.+||..|+|.+.+......+++.....++.+++.||+|+|.-.+ .|+.++..|.
T Consensus         1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nC   80 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNC   80 (484)
T ss_pred             CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccc
Confidence            356789999999999999999999999999999999999877778999999999999999999998776 8999999998


Q ss_pred             cccccc------c-------------------ccccccCc-------------------chhhHHHHHHHHHhCCCCCcc
Q 039276          161 LTQIQT------L-------------------ATISYMAP-------------------DTYNFGIMIMETFSGKKPTIK  196 (263)
Q Consensus       161 l~~~~~------~-------------------g~~~y~aP-------------------Dv~SlG~il~ell~g~~Pf~~  196 (263)
                      +.+..-      .                   -..-|.||                   ||||||++++|+++.+.||..
T Consensus        81 lvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~  160 (484)
T KOG1023|consen   81 LVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDL  160 (484)
T ss_pred             eeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCcccc
Confidence            843311      0                   12226666                   999999999999999999986


Q ss_pred             ccCCCch--hhhHhhhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          197 FFHGEMT--LKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       197 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .......  +...+...........+.            ...+..+++..++..||..+|.+||++++|
T Consensus       161 ~~~~~~~~eii~~~~~~~~~~~rP~i~------------~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i  217 (484)
T KOG1023|consen  161 RNLVEDPDEIILRVKKGGSNPFRPSIE------------LLNELPPELLLLVARCWEEIPEKRPSIEQI  217 (484)
T ss_pred             ccccCChHHHHHHHHhcCCCCcCcchh------------hhhhcchHHHHHHHHhcccChhhCccHHHH
Confidence            4333221  111111100000100000            011445579999999999999999998764

>smart00090 RIO RIO-like kinase

Probab=99.64  E-value=1.3e-15  Score=122.60  Aligned_cols=126  Identities=17%  Similarity=0.055  Sum_probs=96.8

Q ss_pred             cccccceecccCceEEEEEE--ecCCceEEEEEeecCCCc------------------------hHHHHHHHHHHHhhcC
Q 039276           33 LFSESNLISRGGFGSIYKAK--IQDGMEVVVKGFNLQYGG------------------------AFKNLDVECNMMKIIR   86 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~--~~~~~~v~vK~~~~~~~~------------------------~~~~~~~e~~~l~~~~   86 (263)
                      .|...+.||+|++|.||+|.  ..+|+.||+|++......                        ....+..|+++++.+.
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~  108 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY  108 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            48888999999999999998  567999999999754210                        0123457999999997


Q ss_pred             CC--cceeEeeEeecCCeeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCC-ccccccCCCccccc
Q 039276           87 HQ--NLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGH-STHLLLKEDQSLTQ  163 (263)
Q Consensus        87 h~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~h~dlk~~nil~~  163 (263)
                      +.  .+.+++.+    ...++||||+++.++..+..... .........++.|++.++++||.++ ++|+|+||+||+..
T Consensus       109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~  183 (237)
T smart00090      109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDV-EPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH  183 (237)
T ss_pred             hcCCCCCeeeEe----cCceEEEEEecCCcccccccccC-CcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE
Confidence            53  33444443    23489999999988876653332 2555667789999999999999999 99999999999986

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.61  E-value=4.9e-15  Score=116.49  Aligned_cols=116  Identities=17%  Similarity=0.207  Sum_probs=91.3

Q ss_pred             eecccCceEEEEEEecCCceEEEEEeecCCC--c------hHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           39 LISRGGFGSIYKAKIQDGMEVVVKGFNLQYG--G------AFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        39 ~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~--~------~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      .||+|++|.||++.+. +.++++|.......  .      ...++.+|++++..+.|+++.....++......+++|||+
T Consensus         1 ~ig~G~~~~vy~~~~~-~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~   79 (199)
T TIGR03724         1 LIAKGAEAIIYLGDFL-GLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI   79 (199)
T ss_pred             CCCCCceEEEEEeecC-CccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence            4799999999999854 78899998754321  1      1245667999999998876554444444555678999999


Q ss_pred             CCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccc
Q 039276          111 PHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQ  163 (263)
Q Consensus       111 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~  163 (263)
                      ++++|.+++.....        .++.+++.+|.++|..+++|+|++|.|++..
T Consensus        80 ~g~~l~~~~~~~~~--------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~  124 (199)
T TIGR03724        80 EGKPLKDVIEEGND--------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR  124 (199)
T ss_pred             CCccHHHHHhhcHH--------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE
Confidence            99999988754321        6889999999999999999999999999976

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.60  E-value=2.9e-15  Score=138.46  Aligned_cols=159  Identities=21%  Similarity=0.177  Sum_probs=117.0

Q ss_pred             cccccccceecccCceEEEEEEecCCceEEEEEeecC---CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           31 LFLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQ---YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      ...|...+.+|+|++|+||+|...+|+.||+|+-+..   +..-..+++..+. ..+  -+.|..+...+.-.+..++++
T Consensus       697 ~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEfYI~~q~~~RLk-~~~--~~~~~~~~~a~~~~~~S~lv~  773 (974)
T KOG1166|consen  697 GEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEFYICLQVMERLK-PQM--LPSIMHISSAHVFQNASVLVS  773 (974)
T ss_pred             ceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCceeeeehHHHHHhhc-hhh--hcchHHHHHHHccCCcceeee
Confidence            3568889999999999999999777999999987654   2233444444433 111  122333333333344568999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccccc-------------------
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQTLA-------------------  168 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~~g-------------------  168 (263)
                      ||.+.|+|.+++.. .+..++.....++.||+..++.||..+|||+||||+|.++.....+                   
T Consensus       774 ey~~~Gtlld~~N~-~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~  852 (974)
T KOG1166|consen  774 EYSPYGTLLDLINT-NKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMK  852 (974)
T ss_pred             eccccccHHHhhcc-CCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecccceeee
Confidence            99999999999984 4458999999999999999999999999999999999995432211                   


Q ss_pred             -------------cccccCc------------chhhHHHHHHHHHhCCCC
Q 039276          169 -------------TISYMAP------------DTYNFGIMIMETFSGKKP  193 (263)
Q Consensus       169 -------------~~~y~aP------------Dv~SlG~il~ell~g~~P  193 (263)
                                   |-.+-.+            |.|.|+.+++-|++|+.-
T Consensus       853 lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~  902 (974)
T KOG1166|consen  853 LFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM  902 (974)
T ss_pred             EcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence                         1111111            999999999999998764

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.59  E-value=1.2e-14  Score=130.81  Aligned_cols=121  Identities=16%  Similarity=0.119  Sum_probs=96.4

Q ss_pred             cccccceecccCceEEEEEEecCCceEEEEEeecCC--C------chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeE
Q 039276           33 LFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQY--G------GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKA  104 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~--~------~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~  104 (263)
                      .|...+.||+|+||.||++.+.. ..+++|+.....  .      ....++.+|+++++.++|++++....+..+....+
T Consensus       334 ~~~~~~~iG~G~~g~Vy~~~~~~-~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~  412 (535)
T PRK09605        334 RKIPDHLIGKGAEADIKKGEYLG-RDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKT  412 (535)
T ss_pred             ccCccceeccCCcEEEEEEeecC-ccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCE
Confidence            35668899999999999998663 344444432221  1      12345778999999999999988777776666789


Q ss_pred             EEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccc
Q 039276          105 LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQ  163 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~  163 (263)
                      ++|||+++++|.+++.         ....++.+++.+|.+||+.+++|||+||+||+..
T Consensus       413 lv~E~~~g~~L~~~l~---------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl~  462 (535)
T PRK09605        413 IVMEYIGGKDLKDVLE---------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIVR  462 (535)
T ss_pred             EEEEecCCCcHHHHHH---------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEEE
Confidence            9999999999998875         2456889999999999999999999999999983

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.54  E-value=5.9e-14  Score=110.33  Aligned_cols=120  Identities=18%  Similarity=0.056  Sum_probs=92.2

Q ss_pred             ccccceecccCceEEEEEEecCCceEEEEEeecCCCc----------------------hHHHHHHHHHHHhhcCCC--c
Q 039276           34 FSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGG----------------------AFKNLDVECNMMKIIRHQ--N   89 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~----------------------~~~~~~~e~~~l~~~~h~--~   89 (263)
                      |...+.||+|+||.||++...+++.++||++......                      .......|+.++..+.+.  .
T Consensus        17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~   96 (198)
T cd05144          17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFP   96 (198)
T ss_pred             hhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCC
Confidence            7778999999999999999778999999997653210                      011245688888888776  3


Q ss_pred             ceeEeeEeecCCeeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc
Q 039276           90 LIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI  164 (263)
Q Consensus        90 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~  164 (263)
                      +...++    ....+++|||+++++|......       .....++.+++.++.++|..+++|+||+|+||+.+.
T Consensus        97 v~~~~~----~~~~~lv~e~~~g~~L~~~~~~-------~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~  160 (198)
T cd05144          97 VPKPID----WNRHAVVMEYIDGVELYRVRVL-------EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDD  160 (198)
T ss_pred             CCceee----cCCceEEEEEeCCcchhhcccc-------ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcC
Confidence            444443    2345899999999988765431       234568899999999999999999999999999864

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.47  E-value=6.4e-14  Score=128.25  Aligned_cols=177  Identities=23%  Similarity=0.254  Sum_probs=115.4

Q ss_pred             CcccccccccccceecccCceEEEEEEec-CCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeE
Q 039276           26 NNFSGLFLFSESNLISRGGFGSIYKAKIQ-DGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKA  104 (263)
Q Consensus        26 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~-~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~  104 (263)
                      +.-+...+|+..+++..|++|.||..+.. ..+++++ +++++.     -+.+-  ++....+|.+              
T Consensus        77 ~~~p~e~df~~IklisngAygavylvrh~~trqrfa~-kiNkq~-----lilRn--ilt~a~npfv--------------  134 (1205)
T KOG0606|consen   77 RRAPSESDFNTIKLISNGAYGAVYLVRHKETRQRFAM-KINKQN-----LILRN--ILTFAGNPFV--------------  134 (1205)
T ss_pred             ccCCCccccceeEeeccCCCCceeeeeccccccchhh-cccccc-----hhhhc--cccccCCcce--------------
Confidence            44455678999999999999999999844 4677777 333321     01110  1222233333              


Q ss_pred             EEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccc---------------------
Q 039276          105 LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQ---------------------  163 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~---------------------  163 (263)
                       |      |+=+..++.-+. ++.        +++.+++|||+-+|+|||+||+|.++.                     
T Consensus       135 -v------gDc~tllk~~g~-lPv--------dmvla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~a  198 (1205)
T KOG0606|consen  135 -V------GDCATLLKNIGP-LPV--------DMVLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLA  198 (1205)
T ss_pred             -e------chhhhhcccCCC-Ccc--------hhhHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhcc
Confidence             3      455555544332 332        238899999999999999999999822                     


Q ss_pred             -----------------ccccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCC
Q 039276          164 -----------------IQTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPN  214 (263)
Q Consensus       164 -----------------~~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~  214 (263)
                                       ..+.||+.|+||            |.|++|+|+||-+.|++||+.-. .++.+...+...   
T Consensus       199 tnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdt-peelfg~visd~---  274 (1205)
T KOG0606|consen  199 TNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDT-PEELFGQVISDD---  274 (1205)
T ss_pred             chhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCC-HHHHHhhhhhhh---
Confidence                             234789999999            99999999999999999986320 111222222111   


Q ss_pred             chhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCC
Q 039276          215 SVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRI  258 (263)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rp  258 (263)
                               ..     -+......++++.+++.++|+.+|.+|-
T Consensus       275 ---------i~-----wpE~dea~p~Ea~dli~~LL~qnp~~Rl  304 (1205)
T KOG0606|consen  275 ---------IE-----WPEEDEALPPEAQDLIEQLLRQNPLCRL  304 (1205)
T ss_pred             ---------cc-----ccccCcCCCHHHHHHHHHHHHhChHhhc
Confidence                     10     0111334456689999999999999884

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.44  E-value=1.6e-14  Score=130.19  Aligned_cols=215  Identities=20%  Similarity=0.226  Sum_probs=160.9

Q ss_pred             cccccceecccCceEEEEEEecC--CceEEEEEeecCC--CchHHHHHHHHHHHhhcC-CCcceeEeeEeecCCeeEEEE
Q 039276           33 LFSESNLISRGGFGSIYKAKIQD--GMEVVVKGFNLQY--GGAFKNLDVECNMMKIIR-HQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~~~--~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      .|...+.+|+|+|+.+-......  ...++.|.+....  .........|..+.+.+. |.|++.+++........++++
T Consensus        21 ~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~  100 (601)
T KOG0590|consen   21 QYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSL  100 (601)
T ss_pred             cccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccccc
Confidence            48888889999999988876432  4455666655442  233444455777888886 999999999998888999999


Q ss_pred             eccCCCCHhhhh-hhCCCcccHHHHHHHHHHHHHHHHHhc-cCCccccccCCCccccccc--------------------
Q 039276          108 ECMPHGSLGKCL-STSNYILDFFQRLHIMIDVASAVEYLH-FGHSTHLLLKEDQSLTQIQ--------------------  165 (263)
Q Consensus       108 e~~~~~~L~~~l-~~~~~~~~~~~~~~i~~~i~~~l~~lH-~~~i~h~dlk~~nil~~~~--------------------  165 (263)
                      ++..++++..-+ .......+......++.|+..++.|+| ..++.|+|++|+|.+.+..                    
T Consensus       101 ~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~g  180 (601)
T KOG0590|consen  101 SYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNKNG  180 (601)
T ss_pred             CcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhccccccCC
Confidence            999999998888 433323566666779999999999999 9999999999998874321                    


Q ss_pred             -------ccc-cccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcc
Q 039276          166 -------TLA-TISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANL  224 (263)
Q Consensus       166 -------~~g-~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (263)
                             ..| ++.|.||             |+||.|+++.-+++|..|++.....+.....|.........        
T Consensus       181 ~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--------  252 (601)
T KOG0590|consen  181 AERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQ--------  252 (601)
T ss_pred             cceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeeccccccccc--------
Confidence                   246 8888888             99999999999999999998765555444444332211000        


Q ss_pred             cccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          225 LSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       225 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                              ......+....+++.+++..+|+.|.+.+++
T Consensus       253 --------~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~  283 (601)
T KOG0590|consen  253 --------LPWNSISDQAHDLLHKILKENPSNRLSIEEL  283 (601)
T ss_pred             --------CccccCChhhhhcccccccCCchhccccccc
Confidence                    1123444557889999999999999998874

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.44  E-value=9.4e-13  Score=102.42  Aligned_cols=120  Identities=19%  Similarity=0.122  Sum_probs=82.5

Q ss_pred             cceecccCceEEEEEEecCCceEEEEEeecCCCc--hHHHH----------------------HHHHHHHhhcCCC--cc
Q 039276           37 SNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGG--AFKNL----------------------DVECNMMKIIRHQ--NL   90 (263)
Q Consensus        37 ~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~--~~~~~----------------------~~e~~~l~~~~h~--~i   90 (263)
                      .+.||+|+||.||+|...+++.||||++......  .....                      ..|.+.+..+.+.  .+
T Consensus         2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~   81 (187)
T cd05119           2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV   81 (187)
T ss_pred             CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence            4679999999999999778999999998754211  11111                      2355555555333  23


Q ss_pred             eeEeeEeecCCeeEEEEeccCCCCHhh-hhhhCCCcccHHHHHHHHHHHHHHHHHhcc-CCccccccCCCccccc
Q 039276           91 IKIISSCSKDDFKALILECMPHGSLGK-CLSTSNYILDFFQRLHIMIDVASAVEYLHF-GHSTHLLLKEDQSLTQ  163 (263)
Q Consensus        91 ~~~~~~~~~~~~~~lv~e~~~~~~L~~-~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~-~~i~h~dlk~~nil~~  163 (263)
                      .+.++.    ...+++|||++++++.. .+....  .. .....++.+++.++.++|. .+++|+|++|+||+.+
T Consensus        82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~--~~-~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~  149 (187)
T cd05119          82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR--LL-EDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD  149 (187)
T ss_pred             CceEec----CCCEEEEEEeCCCCccChhhhhhh--hc-ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE
Confidence            444432    23589999999854322 111111  11 4567899999999999999 9999999999999986

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.41  E-value=8.2e-14  Score=119.21  Aligned_cols=135  Identities=22%  Similarity=0.280  Sum_probs=95.5

Q ss_pred             eeEEEEeccCCCCHhhhhhhCC--CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccc-----------------
Q 039276          102 FKALILECMPHGSLGKCLSTSN--YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLT-----------------  162 (263)
Q Consensus       102 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~-----------------  162 (263)
                      ++||.|++|...+|.+|+....  ...+......++.|++.|+.|   ++.+|+|+||.||..                 
T Consensus       330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~  406 (516)
T KOG1033|consen  330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQ  406 (516)
T ss_pred             chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheeec
Confidence            5889999999999999996432  226777889999999999999   999999999999982                 


Q ss_pred             ------------cccccccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchh
Q 039276          163 ------------QIQTLATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVM  217 (263)
Q Consensus       163 ------------~~~~~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~  217 (263)
                                  .+...||..||+|            ||||||++|+||+. =..++..    ...+........+.   
T Consensus       407 ~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er----~~t~~d~r~g~ip~---  479 (516)
T KOG1033|consen  407 DKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFER----IATLTDIRDGIIPP---  479 (516)
T ss_pred             ccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHH----HHhhhhhhcCCCCh---
Confidence                        1234789999999            99999999999997 3333221    11111111111110   


Q ss_pred             hhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccC
Q 039276          218 KVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKE  262 (263)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~e  262 (263)
                           .          +..+.+ +-..|+.+++.+.|.+||++.+
T Consensus       480 -----~----------~~~d~p-~e~~ll~~lls~~p~~RP~~~~  508 (516)
T KOG1033|consen  480 -----E----------FLQDYP-EEYTLLQQLLSPSPEERPSAIE  508 (516)
T ss_pred             -----H----------HhhcCc-HHHHHHHHhcCCCcccCchHHH
Confidence                 0          011111 1357899999999999997643

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.38  E-value=4.6e-12  Score=94.45  Aligned_cols=117  Identities=16%  Similarity=0.145  Sum_probs=96.4

Q ss_pred             cceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCC--CcceeEeeEeecCCeeEEEEeccCCCC
Q 039276           37 SNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRH--QNLIKIISSCSKDDFKALILECMPHGS  114 (263)
Q Consensus        37 ~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h--~~i~~~~~~~~~~~~~~lv~e~~~~~~  114 (263)
                      .+.+|+|.++.||++... +..+++|.......  ...+..|+..++.+.+  .++++++.+....+..++++||++++.
T Consensus         3 ~~~i~~g~~~~v~~~~~~-~~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~   79 (155)
T cd05120           3 IKLLKGGLTNRVYLLGTK-DEDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGET   79 (155)
T ss_pred             ceecccccccceEEEEec-CCeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCee
Confidence            567899999999999976 37899998865533  4567889999999976  588898888877788999999998877


Q ss_pred             HhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccC---CccccccCCCcccccc
Q 039276          115 LGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFG---HSTHLLLKEDQSLTQI  164 (263)
Q Consensus       115 L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlk~~nil~~~  164 (263)
                      +..+        +......++.+++.+++++|..   +++|+|++|+|++...
T Consensus        80 ~~~~--------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~  124 (155)
T cd05120          80 LDEV--------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDD  124 (155)
T ss_pred             cccC--------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEEC
Confidence            7654        3445567889999999999985   6999999999999865

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.37  E-value=7.7e-12  Score=100.99  Aligned_cols=123  Identities=13%  Similarity=0.128  Sum_probs=90.9

Q ss_pred             ccceec-ccCceEEEEEEecCCceEEEEEeecCC-------------CchHHHHHHHHHHHhhcCCCcc--eeEeeEeec
Q 039276           36 ESNLIS-RGGFGSIYKAKIQDGMEVVVKGFNLQY-------------GGAFKNLDVECNMMKIIRHQNL--IKIISSCSK   99 (263)
Q Consensus        36 ~~~~lg-~g~~g~v~~~~~~~~~~v~vK~~~~~~-------------~~~~~~~~~e~~~l~~~~h~~i--~~~~~~~~~   99 (263)
                      ....+| .|+.|+||..... +..+++|.+....             .....++.+|++++..+.|+++  +..++....
T Consensus        35 ~~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~  113 (239)
T PRK01723         35 QARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVV  113 (239)
T ss_pred             cCceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeee
Confidence            345677 7888999988765 7789999885311             1233567789999999988775  566665432


Q ss_pred             -CC---eeEEEEeccCC-CCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc
Q 039276          100 -DD---FKALILECMPH-GSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ  165 (263)
Q Consensus       100 -~~---~~~lv~e~~~~-~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~  165 (263)
                       ..   ..++|+|++++ .+|.+++....  ++..    .+.+++.+|.+||..|++|+||||+||+....
T Consensus       114 ~~~~~~~~~lV~e~l~G~~~L~~~l~~~~--l~~~----~~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~  178 (239)
T PRK01723        114 RHGLFYRADILIERIEGARDLVALLQEAP--LSEE----QWQAIGQLIARFHDAGVYHADLNAHNILLDPD  178 (239)
T ss_pred             ecCcceeeeEEEEecCCCCCHHHHHhcCC--CCHH----HHHHHHHHHHHHHHCCCCCCCCCchhEEEcCC
Confidence             22   23599999997 68998876532  4433    35789999999999999999999999998643

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=99.19  E-value=2.1e-10  Score=101.39  Aligned_cols=151  Identities=17%  Similarity=0.211  Sum_probs=116.1

Q ss_pred             ccccceecccCceEEEE-EE-ecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccC
Q 039276           34 FSESNLISRGGFGSIYK-AK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMP  111 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~-~~-~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~  111 (263)
                      |+. .....++.+ +|. |. ..++.+|.|...+.+.........+.+..++.++||||++++..+...+..|+|+|.+ 
T Consensus        15 Y~l-e~~~~~~~a-~~~~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV-   91 (690)
T KOG1243|consen   15 YDL-EETAFSSEA-LWPDGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERV-   91 (690)
T ss_pred             ccc-ccccCCCcc-cccccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecc-
Confidence            655 444444444 443 44 6678999999988876666677888999999999999999999999999999999987 


Q ss_pred             CCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhc-cCCccccccCCCcccccccc-------------cccc-------
Q 039276          112 HGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLH-FGHSTHLLLKEDQSLTQIQT-------------LATI-------  170 (263)
Q Consensus       112 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH-~~~i~h~dlk~~nil~~~~~-------------~g~~-------  170 (263)
                       ..|..++++.    .......-+.||+.||.||| +.+++|+++..+.|+.+..+             .|+.       
T Consensus        92 -~Pl~~~lk~l----~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~  166 (690)
T KOG1243|consen   92 -RPLETVLKEL----GKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLY  166 (690)
T ss_pred             -ccHHHHHHHh----HHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccch
Confidence             4677777763    35566678899999999997 66899999999988855432             1111       


Q ss_pred             ---cccCc----------chhhHHHHHHHHHhCCC
Q 039276          171 ---SYMAP----------DTYNFGIMIMETFSGKK  192 (263)
Q Consensus       171 ---~y~aP----------Dv~SlG~il~ell~g~~  192 (263)
                         .|..|          |.|-|||+++|++.|..
T Consensus       167 ~~~s~~~P~~~~~s~~s~D~~~Lg~li~el~ng~~  201 (690)
T KOG1243|consen  167 LIESFDDPEEIDPSEWSIDSWGLGCLIEELFNGSL  201 (690)
T ss_pred             hhhcccChhhcCccccchhhhhHHHHHHHHhCccc
Confidence               13433          99999999999999943

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.16  E-value=3.8e-10  Score=98.83  Aligned_cols=126  Identities=15%  Similarity=0.129  Sum_probs=84.1

Q ss_pred             cceecccCceEEEEEEecCCceEEEEEeecCCCchH------------------------------H----------HHH
Q 039276           37 SNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAF------------------------------K----------NLD   76 (263)
Q Consensus        37 ~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~------------------------------~----------~~~   76 (263)
                      .+++|.|++|+||+|+..+|+.||||+.........                              +          .+.
T Consensus       122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~  201 (437)
T TIGR01982       122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR  201 (437)
T ss_pred             CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence            578999999999999988899999999865311100                              0          122


Q ss_pred             HHHHHHhhc----CCCcceeEeeEeec-CCeeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHH-HHHHhccCCc
Q 039276           77 VECNMMKII----RHQNLIKIISSCSK-DDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVAS-AVEYLHFGHS  150 (263)
Q Consensus        77 ~e~~~l~~~----~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~-~l~~lH~~~i  150 (263)
                      +|++.+..+    .+.+-+.+...+.+ +...+++|||++|++|.++.........   ...++..++. .+..+|..|+
T Consensus       202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~ql~~~g~  278 (437)
T TIGR01982       202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQVLRDGF  278 (437)
T ss_pred             HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHHHHhCCc
Confidence            344444444    23333444444422 3456899999999999887654222122   2345555555 4788899999


Q ss_pred             cccccCCCccccccc
Q 039276          151 THLLLKEDQSLTQIQ  165 (263)
Q Consensus       151 ~h~dlk~~nil~~~~  165 (263)
                      +|+|++|.||+...+
T Consensus       279 ~H~D~hPgNilv~~~  293 (437)
T TIGR01982       279 FHADLHPGNIFVLKD  293 (437)
T ss_pred             eeCCCCcccEEECCC
Confidence            999999999997544

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.12  E-value=6.9e-11  Score=96.24  Aligned_cols=160  Identities=21%  Similarity=0.193  Sum_probs=107.4

Q ss_pred             HHhhcCCCcceeEeeEeecCC-----eeEEEEeccCCCCHhhhhhhCCCc---ccHHHHHHHHHHHHHHHHHhccC--Cc
Q 039276           81 MMKIIRHQNLIKIISSCSKDD-----FKALILECMPHGSLGKCLSTSNYI---LDFFQRLHIMIDVASAVEYLHFG--HS  150 (263)
Q Consensus        81 ~l~~~~h~~i~~~~~~~~~~~-----~~~lv~e~~~~~~L~~~l~~~~~~---~~~~~~~~i~~~i~~~l~~lH~~--~i  150 (263)
                      .+-++.|.|+++...++.+.+     ...++.||+..|++.+++++..+.   ++...-.+|..||+.||.|||.-  .+
T Consensus       120 nllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Ppi  199 (458)
T KOG1266|consen  120 NLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPI  199 (458)
T ss_pred             HHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCcc
Confidence            344557999999988886543     467899999999999999864332   66777789999999999999965  68


Q ss_pred             cccccCCCccccccc---------------------------ccccccccCc------------chhhHHHHHHHHHhCC
Q 039276          151 THLLLKEDQSLTQIQ---------------------------TLATISYMAP------------DTYNFGIMIMETFSGK  191 (263)
Q Consensus       151 ~h~dlk~~nil~~~~---------------------------~~g~~~y~aP------------Dv~SlG~il~ell~g~  191 (263)
                      +|+++..+-|+..-+                           -.+-++|.+|            |||+||++..||.-+.
T Consensus       200 ihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailE  279 (458)
T KOG1266|consen  200 IHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILE  279 (458)
T ss_pred             ccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHhe
Confidence            899988876662211                           1235556666            9999999999998876


Q ss_pred             CCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          192 KPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       192 ~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .--......-.          .+  ..+.......+.           ..-+.++.+|++..|..||+|.++
T Consensus       280 iq~tnseS~~~----------~e--e~ia~~i~~len-----------~lqr~~i~kcl~~eP~~rp~ar~l  328 (458)
T KOG1266|consen  280 IQSTNSESKVE----------VE--ENIANVIIGLEN-----------GLQRGSITKCLEGEPNGRPDARLL  328 (458)
T ss_pred             eccCCCcceee----------hh--hhhhhheeeccC-----------ccccCcCcccccCCCCCCcchhhh
Confidence            64211100000          00  000000000000           013568899999999999998753

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.02  E-value=3.1e-09  Score=80.24  Aligned_cols=129  Identities=11%  Similarity=0.020  Sum_probs=98.2

Q ss_pred             ccceecccCceEEEEEEecCCceEEEEEeecCC--------CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           36 ESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQY--------GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        36 ~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~--------~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      ...++-||+-+.|+++.+. |+.++||..-.+.        .-..++..+|++.+.++.--+|.-..-++.+...-++.|
T Consensus        11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M   89 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM   89 (229)
T ss_pred             cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence            5778899999999999888 8888888774432        123566778999999887656654444556666678999


Q ss_pred             eccCC-CCHhhhhhhCCCc-ccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc
Q 039276          108 ECMPH-GSLGKCLSTSNYI-LDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ  165 (263)
Q Consensus       108 e~~~~-~~L~~~l~~~~~~-~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~  165 (263)
                      ||+++ .++.+++...... ........++..+-..+.-||..+++|+||..+||++.+.
T Consensus        90 E~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~  149 (229)
T KOG3087|consen   90 EFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSD  149 (229)
T ss_pred             EeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecC
Confidence            99977 4788888764322 2333336788999999999999999999999999996554

>cd05151 ChoK Choline Kinase (ChoK)

Probab=98.97  E-value=2.6e-09  Score=81.51  Aligned_cols=114  Identities=16%  Similarity=0.085  Sum_probs=82.7

Q ss_pred             cceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcce-eEeeEeecCCeeEEEEeccCCCCH
Q 039276           37 SNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLI-KIISSCSKDDFKALILECMPHGSL  115 (263)
Q Consensus        37 ~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~~~~~~~~~~lv~e~~~~~~L  115 (263)
                      .+.++.|.++.||++... +..+++|....... ....+..|+.+++.+.+.+++ +++.+..  ...++|||++++.++
T Consensus         3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G~~l   78 (170)
T cd05151           3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIEGSEL   78 (170)
T ss_pred             eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecCCCcc
Confidence            356889999999998865 78899998765432 123356788888888654443 4554432  235899999999877


Q ss_pred             hhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCc-----cccccCCCccccc
Q 039276          116 GKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHS-----THLLLKEDQSLTQ  163 (263)
Q Consensus       116 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i-----~h~dlk~~nil~~  163 (263)
                      ...    .. .    ...++.+++.+|+.||..++     +|+|++|.||+.+
T Consensus        79 ~~~----~~-~----~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~  122 (170)
T cd05151          79 LTE----DF-S----DPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD  122 (170)
T ss_pred             ccc----cc-c----CHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE
Confidence            653    00 1    12356789999999999985     9999999999976

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.92  E-value=9.6e-10  Score=96.00  Aligned_cols=162  Identities=22%  Similarity=0.150  Sum_probs=128.8

Q ss_pred             ccccccceecc--cCceEEEEEEe---cCCceEEEEEe--ecCCCchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCee
Q 039276           32 FLFSESNLISR--GGFGSIYKAKI---QDGMEVVVKGF--NLQYGGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFK  103 (263)
Q Consensus        32 ~~y~~~~~lg~--g~~g~v~~~~~---~~~~~v~vK~~--~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~  103 (263)
                      ..+.....+|.  |.+|.+|.+..   .++..+++|.-  .........+-.+|+...+.+ .|++.++....+...+..
T Consensus       114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~l  193 (524)
T KOG0601|consen  114 QRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGIL  193 (524)
T ss_pred             hhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcc
Confidence            45777888999  99999999875   34778888873  333344555556788877777 499999988888888999


Q ss_pred             EEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHH----HHHHhccCCccccccCCCccccccc-c------------
Q 039276          104 ALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVAS----AVEYLHFGHSTHLLLKEDQSLTQIQ-T------------  166 (263)
Q Consensus       104 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~----~l~~lH~~~i~h~dlk~~nil~~~~-~------------  166 (263)
                      |+-+|.|. .+|.++......-++....+..+.+...    ||..+|...++|-|++|+||+...+ .            
T Consensus       194 fiqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~  272 (524)
T KOG0601|consen  194 FIQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSK  272 (524)
T ss_pred             eeeecccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCcceeEE
Confidence            99999885 5888888765554788888888888888    9999999999999999999995443 1            


Q ss_pred             ----------------cccccccCc-----------chhhHHHHHHHHHhCCCCC
Q 039276          167 ----------------LATISYMAP-----------DTYNFGIMIMETFSGKKPT  194 (263)
Q Consensus       167 ----------------~g~~~y~aP-----------Dv~SlG~il~ell~g~~Pf  194 (263)
                                      .|..-|++|           |+||+|.+..+..++..+.
T Consensus       273 i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~  327 (524)
T KOG0601|consen  273 ISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLP  327 (524)
T ss_pred             ccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccc
Confidence                            345558887           9999999999999877664

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=98.90  E-value=2e-08  Score=78.02  Aligned_cols=120  Identities=17%  Similarity=0.099  Sum_probs=84.7

Q ss_pred             ceecccCceEEEEEEecC-------CceEEEEEeecCC----------------------CchHHHHH----HHHHHHhh
Q 039276           38 NLISRGGFGSIYKAKIQD-------GMEVVVKGFNLQY----------------------GGAFKNLD----VECNMMKI   84 (263)
Q Consensus        38 ~~lg~g~~g~v~~~~~~~-------~~~v~vK~~~~~~----------------------~~~~~~~~----~e~~~l~~   84 (263)
                      ..+|.|.=+.||.|...+       +..+|||+.....                      ....+.+.    +|++.|++
T Consensus         3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r   82 (197)
T cd05146           3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR   82 (197)
T ss_pred             CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence            568999999999998442       4789999985421                      01122333    68999988


Q ss_pred             cCC--CcceeEeeEeecCCeeEEEEeccCCCCHhh-hhhhCCCcccHHHHHHHHHHHHHHHHHh-ccCCccccccCCCcc
Q 039276           85 IRH--QNLIKIISSCSKDDFKALILECMPHGSLGK-CLSTSNYILDFFQRLHIMIDVASAVEYL-HFGHSTHLLLKEDQS  160 (263)
Q Consensus        85 ~~h--~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~-~l~~~~~~~~~~~~~~i~~~i~~~l~~l-H~~~i~h~dlk~~ni  160 (263)
                      +..  -++++.+.+    ..-+++|||+.+..+.. .++..  .++......+..+++.+|..+ |..+++|+||++.||
T Consensus        83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~--~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NI  156 (197)
T cd05146          83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDA--KLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNM  156 (197)
T ss_pred             HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhcc--ccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHE
Confidence            854  456666654    34589999997644422 22221  244556677889999999998 899999999999999


Q ss_pred             ccc
Q 039276          161 LTQ  163 (263)
Q Consensus       161 l~~  163 (263)
                      +..
T Consensus       157 L~~  159 (197)
T cd05146         157 LWH  159 (197)
T ss_pred             EEE
Confidence            974

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=98.89  E-value=1.3e-08  Score=90.76  Aligned_cols=126  Identities=13%  Similarity=0.074  Sum_probs=80.5

Q ss_pred             cccccceecccCceEEEEEEecC-CceEEEEEeecCCCc----------------------------------hHHH---
Q 039276           33 LFSESNLISRGGFGSIYKAKIQD-GMEVVVKGFNLQYGG----------------------------------AFKN---   74 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~~~-~~~v~vK~~~~~~~~----------------------------------~~~~---   74 (263)
                      .|+. +++|.|++|+||+|+..+ |+.||||+.......                                  ..+.   
T Consensus       121 ~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~  199 (537)
T PRK04750        121 DFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHD  199 (537)
T ss_pred             hcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHH
Confidence            3665 899999999999999766 999999999743100                                  0111   


Q ss_pred             ---HHHHHHHHhhc----CCCcceeEeeEeec-CCeeEEEEeccCCCCHhhhhh--hCCC---cccHHHHHHHHHHHHHH
Q 039276           75 ---LDVECNMMKII----RHQNLIKIISSCSK-DDFKALILECMPHGSLGKCLS--TSNY---ILDFFQRLHIMIDVASA  141 (263)
Q Consensus        75 ---~~~e~~~l~~~----~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~--~~~~---~~~~~~~~~i~~~i~~~  141 (263)
                         +.+|+..+.++    .+...+.+...+.+ +...+++|||+.|+++.+.-.  ..+.   .+....+..++.|+   
T Consensus       200 ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi---  276 (537)
T PRK04750        200 ELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV---  276 (537)
T ss_pred             hhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH---
Confidence               22344444444    24444444454433 445689999999999977432  2221   12233333444444   


Q ss_pred             HHHhccCCccccccCCCcccccccc
Q 039276          142 VEYLHFGHSTHLLLKEDQSLTQIQT  166 (263)
Q Consensus       142 l~~lH~~~i~h~dlk~~nil~~~~~  166 (263)
                          ...|++|+|++|.||+...++
T Consensus       277 ----f~~GffHaDpHPGNIlv~~~g  297 (537)
T PRK04750        277 ----FRDGFFHADMHPGNIFVSYDP  297 (537)
T ss_pred             ----HhCCeeeCCCChHHeEEecCC
Confidence                358999999999999986543

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=98.86  E-value=5.7e-08  Score=84.05  Aligned_cols=148  Identities=16%  Similarity=0.133  Sum_probs=112.8

Q ss_pred             eEEEEEE-ecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeec----CCeeEEEEeccCC-CCHhhhh
Q 039276           46 GSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSK----DDFKALILECMPH-GSLGKCL  119 (263)
Q Consensus        46 g~v~~~~-~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~----~~~~~lv~e~~~~-~~L~~~l  119 (263)
                      .+.|++. ..+|..|++|.++............-++.++++.|+|+|++.+++..    ...+++|++|.|. ++|.++-
T Consensus       290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~  369 (655)
T KOG3741|consen  290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLY  369 (655)
T ss_pred             ceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHH
Confidence            4678887 66799999999966544444344456889999999999999998863    3468899999886 4666533


Q ss_pred             hh--------------CCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc------cccccc-----cC
Q 039276          120 ST--------------SNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT------LATISY-----MA  174 (263)
Q Consensus       120 ~~--------------~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~------~g~~~y-----~a  174 (263)
                      -.              .+...++..+|.++.|+..||.++|+.|+.-.-|.+.+|+...+.      .|-..-     .+
T Consensus       370 F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d~~~  449 (655)
T KOG3741|consen  370 FANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQEDPTE  449 (655)
T ss_pred             ccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcceEEEecccceeeecCCCCc
Confidence            21              122367889999999999999999999999999999999976552      111111     34


Q ss_pred             c-------chhhHHHHHHHHHhCCCC
Q 039276          175 P-------DTYNFGIMIMETFSGKKP  193 (263)
Q Consensus       175 P-------Dv~SlG~il~ell~g~~P  193 (263)
                      |       |.=.||.++..|.||..-
T Consensus       450 ~le~~Qq~D~~~lG~ll~aLAt~~~n  475 (655)
T KOG3741|consen  450 PLESQQQNDLRDLGLLLLALATGTEN  475 (655)
T ss_pred             chhHHhhhhHHHHHHHHHHHhhcccc
Confidence            4       999999999999998654

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.85  E-value=3.4e-08  Score=74.86  Aligned_cols=120  Identities=19%  Similarity=0.159  Sum_probs=90.4

Q ss_pred             ceecccCceEEEEEEecCCceEEEEEeecCCCc--------hHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           38 NLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGG--------AFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        38 ~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~--------~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      .++++|+-+.++.+.+. |.++++|.-..+...        ...+..+|+.++.++.-.+|....-+..+.....|+|||
T Consensus         2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~   80 (204)
T COG3642           2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY   80 (204)
T ss_pred             chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence            35788999999998765 566888887655221        133456799999988765555444455566667899999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT  166 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~  166 (263)
                      +++..|.+.+...        ...++..+-.-+.-||..||+|+||.++|++.....
T Consensus        81 I~G~~lkd~l~~~--------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~  129 (204)
T COG3642          81 IEGELLKDALEEA--------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGR  129 (204)
T ss_pred             eCChhHHHHHHhc--------chHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCc
Confidence            9999999888765        134667777888999999999999999999987653

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=98.75  E-value=8.2e-08  Score=76.39  Aligned_cols=108  Identities=15%  Similarity=0.138  Sum_probs=79.2

Q ss_pred             cceecccCceEEEEEEecCCceEEEEEeecCCC-chHHHHHHHHHHHhhcCCC--cceeEeeEeecC---CeeEEEEecc
Q 039276           37 SNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYG-GAFKNLDVECNMMKIIRHQ--NLIKIISSCSKD---DFKALILECM  110 (263)
Q Consensus        37 ~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~-~~~~~~~~e~~~l~~~~h~--~i~~~~~~~~~~---~~~~lv~e~~  110 (263)
                      .+.++.|..+.+|++...+|..+++|....... .....+..|.++++.+.+.  .+.+++.+....   +..+++||++
T Consensus         3 ~~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i   82 (223)
T cd05154           3 VRQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERV   82 (223)
T ss_pred             ceecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEe
Confidence            356899999999999876668999999765432 2345678899999998653  456777776553   2568999999


Q ss_pred             CCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhc
Q 039276          111 PHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLH  146 (263)
Q Consensus       111 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH  146 (263)
                      ++.++.+.+..  ..++..+...++.+++.+|..||
T Consensus        83 ~G~~l~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH  116 (223)
T cd05154          83 DGRVLRDRLLR--PELSPEERRALARALADTLAALH  116 (223)
T ss_pred             CCEecCCCCCC--CCCCHHHHHHHHHHHHHHHHHHh
Confidence            99888775532  12566666677778888888887

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.72  E-value=1e-08  Score=89.66  Aligned_cols=166  Identities=22%  Similarity=0.168  Sum_probs=119.7

Q ss_pred             cccccccccccceecccCceEEEEEEe--cCCceEEEEEeecCCCchHHH--HHHHHHHHhhc-CCCcceeEeeEeecCC
Q 039276           27 NFSGLFLFSESNLISRGGFGSIYKAKI--QDGMEVVVKGFNLQYGGAFKN--LDVECNMMKII-RHQNLIKIISSCSKDD  101 (263)
Q Consensus        27 ~~~~~~~y~~~~~lg~g~~g~v~~~~~--~~~~~v~vK~~~~~~~~~~~~--~~~e~~~l~~~-~h~~i~~~~~~~~~~~  101 (263)
                      ..+-+.+|.....||.|.|+.++....  .++..+++|.+...-......  -..|+-+...+ .|.+++.++..+....
T Consensus       260 ~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r  339 (524)
T KOG0601|consen  260 TSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLR  339 (524)
T ss_pred             ceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccc
Confidence            334456799999999999999998773  357788888876553322222  23456555555 4777787766665555


Q ss_pred             eeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc-c-------------
Q 039276          102 FKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT-L-------------  167 (263)
Q Consensus       102 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~-~-------------  167 (263)
                      ..|+-.|||.++++....... ..+.+..++.+..|++.++.++|...++|+|++|+||++..++ .             
T Consensus       340 ~~~ip~e~~~~~s~~l~~~~~-~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~  418 (524)
T KOG0601|consen  340 QGYIPLEFCEGGSSSLRSVTS-QMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLA  418 (524)
T ss_pred             cccCchhhhcCcchhhhhHHH-HhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhccccccccccc
Confidence            678999999998887766332 2377778899999999999999999999999999999976531 0             


Q ss_pred             -------cccccc--Cc------------chhhHHHHHHHHHhCCCC
Q 039276          168 -------ATISYM--AP------------DTYNFGIMIMETFSGKKP  193 (263)
Q Consensus       168 -------g~~~y~--aP------------Dv~SlG~il~ell~g~~P  193 (263)
                             ....++  ++            |++|||.-..+..++.+-
T Consensus       419 ~~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~l  465 (524)
T KOG0601|consen  419 FSSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPL  465 (524)
T ss_pred             eecccccccccccccchhhccccccccccccccccccccccccCccc
Confidence                   011122  22            888888888888876654

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=98.67  E-value=7.6e-09  Score=95.73  Aligned_cols=211  Identities=20%  Similarity=0.200  Sum_probs=132.1

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCC---CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      +.+...+.+.+|.++.++.+. ...+--.++|+.....   .........+-.++-.-.+|.++...-.+.-....++++
T Consensus       804 d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~~  883 (1205)
T KOG0606|consen  804 DGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLVG  883 (1205)
T ss_pred             ccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchhh
Confidence            456777788899999998876 3334333333332221   111111111111111123344443322222234578999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccc------------------------
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQ------------------------  163 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~------------------------  163 (263)
                      +|+.+++|...+...+. .+.......+..++.++++||...++|+|++|+|.+..                        
T Consensus       884 ~~~~~~~~~Skl~~~~~-~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~~  962 (1205)
T KOG0606|consen  884 HYLNGGDLPSKLHNSGC-LSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTTD  962 (1205)
T ss_pred             HHhccCCchhhhhcCCC-cccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCccccccccccccCcCC
Confidence            99999999998876653 44444455777899999999999999999999999811                        


Q ss_pred             ------------------------------ccccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCC
Q 039276          164 ------------------------------IQTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGE  201 (263)
Q Consensus       164 ------------------------------~~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~  201 (263)
                                                    -...||+.|.+|            |.|++|++++|.++|..||...... 
T Consensus       963 ~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq- 1041 (1205)
T KOG0606|consen  963 LSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQ- 1041 (1205)
T ss_pred             cccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcchh-
Confidence                                          012568889999            9999999999999999998643211 


Q ss_pred             chhhhHhhhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCcc
Q 039276          202 MTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAK  261 (263)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~  261 (263)
                      ..+.+..+            ....     -...+...+.++.+++.+.+..+|.+|..+.
T Consensus      1042 ~~f~ni~~------------~~~~-----~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1042 QIFENILN------------RDIP-----WPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred             hhhhcccc------------CCCC-----CCCCccccChhhhhhhhhhhccCchhccCcc
Confidence            11111111            1100     0112345566688899999999999997764

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.56  E-value=1.2e-06  Score=71.89  Aligned_cols=117  Identities=15%  Similarity=0.076  Sum_probs=81.1

Q ss_pred             EEEEEEecCCceEEEEEeecCCCc-hHH----------HHHHHHHHHhhcCCCcc--eeEeeEeec-----CCeeEEEEe
Q 039276           47 SIYKAKIQDGMEVVVKGFNLQYGG-AFK----------NLDVECNMMKIIRHQNL--IKIISSCSK-----DDFKALILE  108 (263)
Q Consensus        47 ~v~~~~~~~~~~v~vK~~~~~~~~-~~~----------~~~~e~~~l~~~~h~~i--~~~~~~~~~-----~~~~~lv~e  108 (263)
                      .|.+..+. |+.+.||........ ..+          ...+|...+..+...+|  ++.+.+...     ....++|+|
T Consensus        37 rvvr~~~~-g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte  115 (268)
T PRK15123         37 RTLRFELA-GKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITE  115 (268)
T ss_pred             eEEEEEEC-CEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEe
Confidence            35555554 778999977443211 111          36678888887743333  344445432     224689999


Q ss_pred             ccCCC-CHhhhhhhC-CCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc
Q 039276          109 CMPHG-SLGKCLSTS-NYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI  164 (263)
Q Consensus       109 ~~~~~-~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~  164 (263)
                      ++++. +|.+++... ....+......++.+++..+.-||..|++|+|+++.||+...
T Consensus       116 ~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~  173 (268)
T PRK15123        116 DLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHL  173 (268)
T ss_pred             eCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEec
Confidence            99886 898887532 122455666789999999999999999999999999999864

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.49  E-value=2.4e-06  Score=72.67  Aligned_cols=159  Identities=13%  Similarity=0.163  Sum_probs=103.1

Q ss_pred             ccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhc-CCCcceeEeeEe------ecC-CeeEE
Q 039276           34 FSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKII-RHQNLIKIISSC------SKD-DFKAL  105 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~------~~~-~~~~l  105 (263)
                      ...++.||+|+-+-+|..-  .-+..+.|+...-......+.   .+.+... .||-+..-+.|=      -+. ....+
T Consensus        13 i~~gr~LgqGgea~ly~l~--e~~d~VAKIYh~Pppa~~aqk---~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGf   87 (637)
T COG4248          13 IPPGRPLGQGGEADLYTLG--EVRDQVAKIYHAPPPAAQAQK---VAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGF   87 (637)
T ss_pred             cCCCccccCCccceeeecc--hhhchhheeecCCCchHHHHH---HHHhccCCCCcchhhhhcccHHHhhCCCccceeEE
Confidence            5567889999999888642  222345677765433322222   2222222 454333212221      112 22556


Q ss_pred             EEeccCCC-CHhhhhhhC----CC-cccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc---------------
Q 039276          106 ILECMPHG-SLGKCLSTS----NY-ILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI---------------  164 (263)
Q Consensus       106 v~e~~~~~-~L~~~l~~~----~~-~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~---------------  164 (263)
                      +|..+++. .+..+.+-.    .. ...|...++.+..++.+.+.||..|.+-+|+.++|++.+.               
T Consensus        88 lmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi~  167 (637)
T COG4248          88 LMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQIN  167 (637)
T ss_pred             ecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEcccceeec
Confidence            67666553 233333211    11 1678888999999999999999999999999999999433               


Q ss_pred             -------cccccccccCc-----------------chhhHHHHHHHHHhC-CCCCccc
Q 039276          165 -------QTLATISYMAP-----------------DTYNFGIMIMETFSG-KKPTIKF  197 (263)
Q Consensus       165 -------~~~g~~~y~aP-----------------Dv~SlG~il~ell~g-~~Pf~~~  197 (263)
                             ..+|...|++|                 |-|.||+++++++.| +.||...
T Consensus       168 ~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI  225 (637)
T COG4248         168 ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGI  225 (637)
T ss_pred             cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcc
Confidence                   22678889999                 999999999999995 9999865

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.37  E-value=3.2e-06  Score=65.48  Aligned_cols=111  Identities=19%  Similarity=0.107  Sum_probs=69.5

Q ss_pred             EEEEEecCCceEEEEEeecCC-------------C---------c----hHHHHHHHHHHHhhcCCC--cceeEeeEeec
Q 039276           48 IYKAKIQDGMEVVVKGFNLQY-------------G---------G----AFKNLDVECNMMKIIRHQ--NLIKIISSCSK   99 (263)
Q Consensus        48 v~~~~~~~~~~v~vK~~~~~~-------------~---------~----~~~~~~~e~~~l~~~~h~--~i~~~~~~~~~   99 (263)
                      ||.|...++..+|+|......             .         .    ......+|.+.|..+...  ++++.+.+.  
T Consensus         2 Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~--   79 (188)
T PF01163_consen    2 VYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN--   79 (188)
T ss_dssp             EEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE--
T ss_pred             EEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe--
Confidence            889988779999999985421             0         0    022345699999999765  456666442  


Q ss_pred             CCeeEEEEeccC--CCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHH-hccCCccccccCCCccccccc
Q 039276          100 DDFKALILECMP--HGSLGKCLSTSNYILDFFQRLHIMIDVASAVEY-LHFGHSTHLLLKEDQSLTQIQ  165 (263)
Q Consensus       100 ~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~-lH~~~i~h~dlk~~nil~~~~  165 (263)
                        .-.+||||++  +..+. .+....  +.......++.+++..+.. +|..|++|+|+.+.||+....
T Consensus        80 --~~~ivME~I~~~G~~~~-~l~~~~--~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~  143 (188)
T PF01163_consen   80 --RNVIVMEYIGEDGVPLP-RLKDVD--LSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG  143 (188)
T ss_dssp             --TTEEEEE--EETTEEGG-CHHHCG--GGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT
T ss_pred             --CCEEEEEecCCCccchh-hHHhcc--ccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc
Confidence              2379999998  53443 333322  1123345677788885544 689999999999999997544

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.23  E-value=1.5e-05  Score=62.96  Aligned_cols=94  Identities=19%  Similarity=0.124  Sum_probs=70.7

Q ss_pred             HHHHHHHHHHHhhcCC--CcceeEeeEeecC----CeeEEEEeccCCC-CHhhhhhhCCCcccHHHHHHHHHHHHHHHHH
Q 039276           72 FKNLDVECNMMKIIRH--QNLIKIISSCSKD----DFKALILECMPHG-SLGKCLSTSNYILDFFQRLHIMIDVASAVEY  144 (263)
Q Consensus        72 ~~~~~~e~~~l~~~~h--~~i~~~~~~~~~~----~~~~lv~e~~~~~-~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~  144 (263)
                      ..+..+|...+..+..  -.+++.+.+....    ...++|+|++++. +|.+++..... .+......++.+++..++-
T Consensus        55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~-~~~~~~~~ll~~l~~~i~~  133 (206)
T PF06293_consen   55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ-LDPSQRRELLRALARLIAK  133 (206)
T ss_pred             chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc-cchhhHHHHHHHHHHHHHH
Confidence            3456678877777743  3344556665442    2358999999874 79998876443 5566778899999999999


Q ss_pred             hccCCccccccCCCcccccccc
Q 039276          145 LHFGHSTHLLLKEDQSLTQIQT  166 (263)
Q Consensus       145 lH~~~i~h~dlk~~nil~~~~~  166 (263)
                      ||..|++|+|+++.||+.....
T Consensus       134 lH~~gi~H~Dl~~~NILv~~~~  155 (206)
T PF06293_consen  134 LHDAGIYHGDLNPSNILVDPDD  155 (206)
T ss_pred             HHHCcCCCCCCCcccEEEeCCC
Confidence            9999999999999999987654

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>PRK09902 hypothetical protein; Provisional

Probab=98.11  E-value=5e-05  Score=59.54  Aligned_cols=123  Identities=15%  Similarity=0.088  Sum_probs=87.6

Q ss_pred             cccCceEEEEEEecCCceEEEEEeecCC------CchHHHHHHHHHHHhhcCCCc--ceeEeeEeec---C--CeeEEEE
Q 039276           41 SRGGFGSIYKAKIQDGMEVVVKGFNLQY------GGAFKNLDVECNMMKIIRHQN--LIKIISSCSK---D--DFKALIL  107 (263)
Q Consensus        41 g~g~~g~v~~~~~~~~~~v~vK~~~~~~------~~~~~~~~~e~~~l~~~~h~~--i~~~~~~~~~---~--~~~~lv~  107 (263)
                      |+|+-+.|+.-..+ |..+-+|.-...-      +-....+.+|+..+..+...+  +.+.. ++..   .  -.-+||+
T Consensus        27 ~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LVT  104 (216)
T PRK09902         27 RRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLVT  104 (216)
T ss_pred             CCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEEE
Confidence            66888888886655 4467788765221      224567888999999885433  33443 3321   1  2457999


Q ss_pred             eccCC-CCHhhhhhhCCC-cccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc
Q 039276          108 ECMPH-GSLGKCLSTSNY-ILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ  165 (263)
Q Consensus       108 e~~~~-~~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~  165 (263)
                      |-+++ .+|.+++..... ..+......++.+++..+.-||+.|+.|+|+.+.||+.+..
T Consensus       105 e~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~  164 (216)
T PRK09902        105 EDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTE  164 (216)
T ss_pred             EeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCC
Confidence            97764 488888865432 25677778899999999999999999999999999998643

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=97.99  E-value=5.7e-05  Score=61.01  Aligned_cols=132  Identities=17%  Similarity=0.048  Sum_probs=88.3

Q ss_pred             ccccceecccCceEEEEEEecCCceEEEEEeecCC------------------C----chHHHHHHHHHHHhhcCCC--c
Q 039276           34 FSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQY------------------G----GAFKNLDVECNMMKIIRHQ--N   89 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~------------------~----~~~~~~~~e~~~l~~~~h~--~   89 (263)
                      ...+++||-|.-+.||.|...+|.++++|.=....                  .    -.+....+|.+.|.++...  .
T Consensus        93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~  172 (304)
T COG0478          93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK  172 (304)
T ss_pred             HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence            55678999999999999998889999999643210                  0    1123345688899988644  6


Q ss_pred             ceeEeeEeecCCeeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc---
Q 039276           90 LIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT---  166 (263)
Q Consensus        90 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~---  166 (263)
                      +.+.+++    +.-.++||++.+--|...-.  .. -+   ...++..|+.-+.-+-..|++|+|+++=||+.+.++   
T Consensus       173 VP~P~~~----nRHaVvMe~ieG~eL~~~r~--~~-en---~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~dg~~~  242 (304)
T COG0478         173 VPKPIAW----NRHAVVMEYIEGVELYRLRL--DV-EN---PDEILDKILEEVRKAYRRGIVHGDLSEFNILVTEDGDIV  242 (304)
T ss_pred             CCCcccc----ccceeeeehcccceeecccC--cc-cC---HHHHHHHHHHHHHHHHHcCccccCCchheEEEecCCCEE
Confidence            6666655    35589999998855554331  11 12   233444555555555588999999999999987752   


Q ss_pred             -cccccccCc
Q 039276          167 -LATISYMAP  175 (263)
Q Consensus       167 -~g~~~y~aP  175 (263)
                       ..-|+|.+.
T Consensus       243 vIDwPQ~v~~  252 (304)
T COG0478         243 VIDWPQAVPI  252 (304)
T ss_pred             EEeCcccccC
Confidence             234455553

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=97.80  E-value=0.00043  Score=61.84  Aligned_cols=137  Identities=12%  Similarity=0.094  Sum_probs=85.3

Q ss_pred             cceecccCceEEEEEEecCCceEEEEEeecCC----------------------Cc----h--------HHH------HH
Q 039276           37 SNLISRGGFGSIYKAKIQDGMEVVVKGFNLQY----------------------GG----A--------FKN------LD   76 (263)
Q Consensus        37 ~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~----------------------~~----~--------~~~------~~   76 (263)
                      .++++.++-|+||+|+..+|+.||||+....-                      ..    .        .+.      +.
T Consensus       130 ~~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~  209 (517)
T COG0661         130 PEPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR  209 (517)
T ss_pred             CCchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence            47899999999999998889999999986531                      00    0        011      12


Q ss_pred             HHHHHHhhc----CCCcceeEeeEeec-CCeeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCcc
Q 039276           77 VECNMMKII----RHQNLIKIISSCSK-DDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHST  151 (263)
Q Consensus        77 ~e~~~l~~~----~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~  151 (263)
                      .|...+..+    .+..-+.+..++.+ .+.-.++|||+.|-.+.+.......+.+...+...+.++.  +.-+-..|+.
T Consensus       210 ~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~f--~~q~~~dgff  287 (517)
T COG0661         210 REAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAGIDRKELAELLVRAF--LRQLLRDGFF  287 (517)
T ss_pred             HHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCcc
Confidence            244444443    23333344444432 4556899999999888887533333355444443333332  2223347999


Q ss_pred             ccccCCCcccccccc------cccccccCc
Q 039276          152 HLLLKEDQSLTQIQT------LATISYMAP  175 (263)
Q Consensus       152 h~dlk~~nil~~~~~------~g~~~y~aP  175 (263)
                      |.|..|.|++....+      .|-.+.++|
T Consensus       288 HaDpHpGNi~v~~~g~i~~lDfGi~g~l~~  317 (517)
T COG0661         288 HADPHPGNILVRSDGRIVLLDFGIVGRLDP  317 (517)
T ss_pred             ccCCCccceEEecCCcEEEEcCcceecCCH
Confidence            999999999977663      455555666

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=97.77  E-value=0.00041  Score=54.75  Aligned_cols=122  Identities=12%  Similarity=0.054  Sum_probs=72.7

Q ss_pred             ccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHH---------HHHHHHHhhcCC---CcceeEeeEee---
Q 039276           34 FSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNL---------DVECNMMKIIRH---QNLIKIISSCS---   98 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~---------~~e~~~l~~~~h---~~i~~~~~~~~---   98 (263)
                      |...+.+-......|.+-..+ |..+++|............+         .+.+..+..+..   .....++-...   
T Consensus        33 ~~~~kv~k~~~r~~ValIei~-~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ekk~  111 (229)
T PF06176_consen   33 YKIIKVFKNTKRNYVALIEID-GKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAAEKKI  111 (229)
T ss_pred             ceEEEeecCCCccEEEEEEEC-CcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeeeeeee
Confidence            666666666666655555444 78999999876532221111         122222223322   22222222211   


Q ss_pred             --cCCeeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc
Q 039276           99 --KDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ  165 (263)
Q Consensus        99 --~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~  165 (263)
                        -....+++|||++|..|.+...     +++    .+...+..++.-+|..|+.|+|..|.|++....
T Consensus       112 ~~~~~~~~ll~EYIeG~~l~d~~~-----i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~  171 (229)
T PF06176_consen  112 FRYTSSYVLLMEYIEGVELNDIED-----IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNN  171 (229)
T ss_pred             ccceeEEEEEEEEecCeecccchh-----cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEECC
Confidence              1234568999999977766542     222    244567788999999999999999999996543

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=97.72  E-value=0.00099  Score=52.12  Aligned_cols=125  Identities=18%  Similarity=0.168  Sum_probs=85.6

Q ss_pred             cccceecccCceEEEEEEecCCceEEEEEeecCC----------------CchHHHHHHHHHHHhhcC------CCccee
Q 039276           35 SESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQY----------------GGAFKNLDVECNMMKIIR------HQNLIK   92 (263)
Q Consensus        35 ~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~----------------~~~~~~~~~e~~~l~~~~------h~~i~~   92 (263)
                      +...+||+|+.=.||.  ..+....+||+.....                ....++..+|+.-...+.      +.++.+
T Consensus         4 ~~~~~i~~G~~R~cy~--HP~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r   81 (199)
T PF10707_consen    4 SESDLIAQGGERDCYQ--HPDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPR   81 (199)
T ss_pred             CCCcccccCCCceEEE--CCCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCccccccc
Confidence            3456789998877775  4445567888886654                122344455665444443      899999


Q ss_pred             EeeEeecCCeeEEEEeccCC------CCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc
Q 039276           93 IISSCSKDDFKALILECMPH------GSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT  166 (263)
Q Consensus        93 ~~~~~~~~~~~~lv~e~~~~------~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~  166 (263)
                      ++|+.+++--..+|+|.+.+      .||.++++...  ++. ...   ..+-.-..||-+.+|+.+|++|.||+.....
T Consensus        82 ~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~--~~~-~~~---~~L~~f~~~l~~~~Iv~~dl~~~NIv~~~~~  155 (199)
T PF10707_consen   82 FYGFVETNLGLGLVVELIRDADGNISPTLEDYLKEGG--LTE-ELR---QALDEFKRYLLDHHIVIRDLNPHNIVVQRRD  155 (199)
T ss_pred             EeEEEecCCceEEEEEEEECCCCCcCccHHHHHHcCC--ccH-HHH---HHHHHHHHHHHHcCCeecCCCcccEEEEecC
Confidence            99999998888999998643      37888886543  444 333   3344456677788999999999999965544


Q ss_pred             c
Q 039276          167 L  167 (263)
Q Consensus       167 ~  167 (263)
                      .
T Consensus       156 ~  156 (199)
T PF10707_consen  156 S  156 (199)
T ss_pred             C
Confidence            3

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=97.64  E-value=0.00079  Score=53.96  Aligned_cols=73  Identities=14%  Similarity=0.114  Sum_probs=53.8

Q ss_pred             cceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCc--ceeEeeEeecCCeeEEEEeccCCCC
Q 039276           37 SNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQN--LIKIISSCSKDDFKALILECMPHGS  114 (263)
Q Consensus        37 ~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~--i~~~~~~~~~~~~~~lv~e~~~~~~  114 (263)
                      -.++|+|..+.||+.   .+..+++|......  ......+|.++++.+...+  +.+.+.+..+++...++||+++|.+
T Consensus         6 ~~~i~~G~t~~~y~~---~~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~   80 (226)
T TIGR02172         6 WTQTGEGGNGESYTH---KTGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKR   80 (226)
T ss_pred             heeecCCCCcceeEe---cCCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCcc
Confidence            467899999999983   25567888876532  3345678999998886443  4677777777777789999998853

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=97.58  E-value=0.00092  Score=52.12  Aligned_cols=115  Identities=15%  Similarity=0.178  Sum_probs=82.0

Q ss_pred             ccccccceecccCc-eEEEEEEecCCceEEEEEeecC---C--------C----------chHHHHHHHHHHHhhcC---
Q 039276           32 FLFSESNLISRGGF-GSIYKAKIQDGMEVVVKGFNLQ---Y--------G----------GAFKNLDVECNMMKIIR---   86 (263)
Q Consensus        32 ~~y~~~~~lg~g~~-g~v~~~~~~~~~~v~vK~~~~~---~--------~----------~~~~~~~~e~~~l~~~~---   86 (263)
                      .+++..+.||.|.- |.||+..+. |+.+|+|.+...   .        .          .....+..|++....++   
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I~-g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~  115 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEID-GRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAG  115 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEEC-CeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhcc
Confidence            56999999999999 999999988 789999994321   0        0          22345677888776664   


Q ss_pred             CCcc--eeEeeEeecC------------------CeeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhc
Q 039276           87 HQNL--IKIISSCSKD------------------DFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLH  146 (263)
Q Consensus        87 h~~i--~~~~~~~~~~------------------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH  146 (263)
                      +.++  ++++||+.-.                  ....||.|+.+...          .....    =+.+|..-+..+|
T Consensus       116 ~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~----------~~~~~----~~~~~~~dl~~~~  181 (207)
T PF13095_consen  116 REGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP----------PLQIR----DIPQMLRDLKILH  181 (207)
T ss_pred             ccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc----------ccchh----HHHHHHHHHHHHH
Confidence            4455  8999988322                  02346666665532          12222    3357888889999


Q ss_pred             cCCccccccCCCccc
Q 039276          147 FGHSTHLLLKEDQSL  161 (263)
Q Consensus       147 ~~~i~h~dlk~~nil  161 (263)
                      ..||+-+|+++.|..
T Consensus       182 k~gI~~~Dv~~~ny~  196 (207)
T PF13095_consen  182 KLGIVPRDVKPRNYR  196 (207)
T ss_pred             HCCeeeccCcccccc
Confidence            999999999999976

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=97.58  E-value=8.4e-06  Score=73.10  Aligned_cols=109  Identities=15%  Similarity=0.202  Sum_probs=69.8

Q ss_pred             HHHHHHHHhccC-CccccccCCCcccccccc-------------cc-------------------cccccCc--------
Q 039276          137 DVASAVEYLHFG-HSTHLLLKEDQSLTQIQT-------------LA-------------------TISYMAP--------  175 (263)
Q Consensus       137 ~i~~~l~~lH~~-~i~h~dlk~~nil~~~~~-------------~g-------------------~~~y~aP--------  175 (263)
                      +++.|+.|+|.. ++||++|.|++|.....+             .+                   ...|.||        
T Consensus       107 ~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~~~  186 (700)
T KOG2137|consen  107 NVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGTTN  186 (700)
T ss_pred             cccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhccccc
Confidence            445899999955 899999999999855433             01                   2225555        


Q ss_pred             ----chhhHHHHHHHHHhCCCC-CccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhcccc
Q 039276          176 ----DTYNFGIMIMETFSGKKP-TIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECT  250 (263)
Q Consensus       176 ----Dv~SlG~il~ell~g~~P-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl  250 (263)
                          |+||+||++|.+..|..+ +... ......+                ......+...+....++++++++-+.+++
T Consensus       187 ~~~sd~fSlG~li~~i~~~gk~i~~a~-~~~~~~~----------------~~~~~~~~~~~~~s~~~p~el~~~l~k~l  249 (700)
T KOG2137|consen  187 TPASDVFSLGVLIYTIYNGGKSIIAAN-GGLLSYS----------------FSRNLLNAGAFGYSNNLPSELRESLKKLL  249 (700)
T ss_pred             cccccceeeeeEEEEEecCCcchhhcc-CCcchhh----------------hhhcccccccccccccCcHHHHHHHHHHh
Confidence                999999999999964444 3211 1111000                00011111111223677888999999999


Q ss_pred             ccCcCCCCCccC
Q 039276          251 VESPNQRINAKE  262 (263)
Q Consensus       251 ~~~p~~Rpt~~e  262 (263)
                      ..++.-||++.+
T Consensus       250 ~~~~~~rp~~~~  261 (700)
T KOG2137|consen  250 NGDSAVRPTLDL  261 (700)
T ss_pred             cCCcccCcchhh
Confidence            999999997653

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=97.51  E-value=0.0012  Score=52.89  Aligned_cols=119  Identities=21%  Similarity=0.156  Sum_probs=77.6

Q ss_pred             eecccCceEEEEEEecCCceEEEEEeecCCCc-------------------hHHH-----HHHHHHHHhhcCC--Cccee
Q 039276           39 LISRGGFGSIYKAKIQDGMEVVVKGFNLQYGG-------------------AFKN-----LDVECNMMKIIRH--QNLIK   92 (263)
Q Consensus        39 ~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~-------------------~~~~-----~~~e~~~l~~~~h--~~i~~   92 (263)
                      .|++|.-+.||.|...++..+|+|++......                   +..+     ..+|+..|+.+..  -.+.+
T Consensus        55 ~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrvP~  134 (268)
T COG1718          55 CISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRVPE  134 (268)
T ss_pred             eecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence            56778888999999777999999999754211                   1111     1247777777643  33344


Q ss_pred             EeeEeecCCeeEEEEeccCCCCH-hhhhhhCCCcccHHHHHHHHHHHHHHHHHhcc-CCccccccCCCccccc
Q 039276           93 IISSCSKDDFKALILECMPHGSL-GKCLSTSNYILDFFQRLHIMIDVASAVEYLHF-GHSTHLLLKEDQSLTQ  163 (263)
Q Consensus        93 ~~~~~~~~~~~~lv~e~~~~~~L-~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~-~~i~h~dlk~~nil~~  163 (263)
                      -+.+.    .-.++||++..... .-.++.-.  ........+..+++..+.-|-. .++||+||+.=|||..
T Consensus       135 Pi~~~----~nVLvMEfIg~~g~pAP~LkDv~--~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~  201 (268)
T COG1718         135 PIAFR----NNVLVMEFIGDDGLPAPRLKDVP--LELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH  201 (268)
T ss_pred             ceeec----CCeEEEEeccCCCCCCCCcccCC--cCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE
Confidence            44443    23799999865321 11222211  2333556677888888888776 8999999999999965

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=97.40  E-value=0.0012  Score=58.94  Aligned_cols=128  Identities=11%  Similarity=0.081  Sum_probs=78.1

Q ss_pred             ccceecccCceEEEEEEecCCceEEEEEeecCCC-------------------------------chHHHH------HHH
Q 039276           36 ESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYG-------------------------------GAFKNL------DVE   78 (263)
Q Consensus        36 ~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~-------------------------------~~~~~~------~~e   78 (263)
                      ..+.||.-+.|+|++|+..+|+.||||+=+..-.                               +..+.+      .+|
T Consensus       165 ~~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~E  244 (538)
T KOG1235|consen  165 DEEPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKE  244 (538)
T ss_pred             CcchhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHH
Confidence            3578999999999999988899999998764310                               001111      223


Q ss_pred             HHH----HhhcCCCc---ceeEeeEeec-CCeeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCc
Q 039276           79 CNM----MKIIRHQN---LIKIISSCSK-DDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHS  150 (263)
Q Consensus        79 ~~~----l~~~~h~~---i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i  150 (263)
                      ++.    .+.+.|-+   -+.+..++.+ .....++|||+.|..+.+.-.-....++...+..-+.+...-+  +-..|+
T Consensus       245 A~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~~gi~~~~i~~~l~~~~~~q--If~~Gf  322 (538)
T KOG1235|consen  245 AKNAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDKRGISPHDILNKLVEAYLEQ--IFKTGF  322 (538)
T ss_pred             HHhHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHHcCCCHHHHHHHHHHHHHHH--HHhcCC
Confidence            332    22334555   2334444433 2356899999999866654332223356555444443333222  224569


Q ss_pred             cccccCCCccccccc
Q 039276          151 THLLLKEDQSLTQIQ  165 (263)
Q Consensus       151 ~h~dlk~~nil~~~~  165 (263)
                      +|+|-.|.||+...+
T Consensus       323 fHaDPHPGNilv~~~  337 (538)
T KOG1235|consen  323 FHADPHPGNILVRPN  337 (538)
T ss_pred             ccCCCCCCcEEEecC
Confidence            999999999998754

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=97.26  E-value=0.0022  Score=48.74  Aligned_cols=110  Identities=17%  Similarity=0.149  Sum_probs=77.2

Q ss_pred             cccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcce-eEeeEeecCCeeEEEEeccC
Q 039276           33 LFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLI-KIISSCSKDDFKALILECMP  111 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~~~~~~~~~~lv~e~~~  111 (263)
                      .......|+.|.+|.||+|.+. +..+++|+-..+.  .+..+..|++++..+.-.++. +++.+.    ..++.|||+.
T Consensus        23 ~~~v~~~L~KG~~s~Vyl~~~~-~~~~a~Kvrr~ds--~r~~l~kEakiLeil~g~~~~p~vy~yg----~~~i~me~i~   95 (201)
T COG2112          23 ELRVEKELAKGTTSVVYLGEWR-GGEVALKVRRRDS--PRRNLEKEAKILEILAGEGVTPEVYFYG----EDFIRMEYID   95 (201)
T ss_pred             hhhhhhhhhcccccEEEEeecc-CceEEEEEecCCc--chhhHHHHHHHHHHhhhcCCCceEEEec----hhhhhhhhhc
Confidence            3566778999999999999988 6688888766543  456678899999988765554 444442    3356799999


Q ss_pred             CCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCC
Q 039276          112 HGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKE  157 (263)
Q Consensus       112 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~  157 (263)
                      |..|.++-...    ...    -+..++..---|...||-|+.+.-
T Consensus        96 G~~L~~~~~~~----~rk----~l~~vlE~a~~LD~~GI~H~El~~  133 (201)
T COG2112          96 GRPLGKLEIGG----DRK----HLLRVLEKAYKLDRLGIEHGELSR  133 (201)
T ss_pred             Ccchhhhhhcc----cHH----HHHHHHHHHHHHHHhccchhhhcC
Confidence            98888765432    212    223455665666777888887754

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=97.16  E-value=0.0015  Score=57.68  Aligned_cols=159  Identities=16%  Similarity=0.165  Sum_probs=92.5

Q ss_pred             hHHHHHHHHHHHhhcCCCcceeEeeEeec-CCeeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCC
Q 039276           71 AFKNLDVECNMMKIIRHQNLIKIISSCSK-DDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGH  149 (263)
Q Consensus        71 ~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~  149 (263)
                      ...++....+.++.+.|+|...++++... .....+|+|++. .+|.+.+..+.  .......            -|  +
T Consensus        25 ~s~~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~~-~Sled~~~~~~--l~~~s~~------------~~--~   87 (725)
T KOG1093|consen   25 NSIQILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHYT-MSLEDILKTGN--LKDESLL------------AH--G   87 (725)
T ss_pred             cHHHHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhhc-cchHHHHHhcc--cchhhhc------------cc--c
Confidence            45667778999999999999999887743 345789999984 49999887654  2111111            11  1


Q ss_pred             ccccccCCCccccccccccccc--ccCc--chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhc-C-CCchhhhhhhc
Q 039276          150 STHLLLKEDQSLTQIQTLATIS--YMAP--DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDL-L-PNSVMKVVSAN  223 (263)
Q Consensus       150 i~h~dlk~~nil~~~~~~g~~~--y~aP--Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~  223 (263)
                      +.     +-|+...++..-|..  =.-|  ||||+|.++.|+..|..-+......+  ..+.+... . +..........
T Consensus        88 ~~-----~~~~~~~td~~~t~~~~~~~pKsdVwsl~~i~~el~L~~~l~~~~~~s~--~l~~i~k~~~~d~~~~~~a~e~  160 (725)
T KOG1093|consen   88 VL-----HLNIIYITDHFLTKYPSPIGPKSDVWSLGFIILELYLGISLEAELTESE--YLEILLKYYTDDQELLSTAMEH  160 (725)
T ss_pred             cc-----eehhhhccccccccCCCCCCcchhhhhHHHHHHHHHHhhHHHHHHHHHH--HHHHHHHhccCchhHHHHHHHH
Confidence            11     112221111111111  0113  99999999999999988765432111  11111111 1 11111111111


Q ss_pred             ccccccccccchHHHHHHHHHhhccccccCcCCCCCccC
Q 039276          224 LLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKE  262 (263)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~e  262 (263)
                               ...-.++..+.++..+|+...|..||...+
T Consensus       161 ---------~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~  190 (725)
T KOG1093|consen  161 ---------LIQLLADKKRLPLLKKCLWLEPIIRPLPME  190 (725)
T ss_pred             ---------HHHHhhhHhHHHHhccCCccccccccchhH
Confidence                     124466777899999999999999996543

>PLN02876 acyl-CoA dehydrogenase

Probab=97.09  E-value=0.0056  Score=58.48  Aligned_cols=108  Identities=13%  Similarity=0.122  Sum_probs=75.0

Q ss_pred             cceecccCceEEEEEEecCC---ceEEEEEeecCC-CchHHHHHHHHHHHhhcC-CCcc--eeEeeEeecC---CeeEEE
Q 039276           37 SNLISRGGFGSIYKAKIQDG---MEVVVKGFNLQY-GGAFKNLDVECNMMKIIR-HQNL--IKIISSCSKD---DFKALI  106 (263)
Q Consensus        37 ~~~lg~g~~g~v~~~~~~~~---~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~-h~~i--~~~~~~~~~~---~~~~lv  106 (263)
                      ...++.|.++.+|+....++   ..+++|+..... ......+.+|+++++.+. |.++  .+++.++.+.   +..|+|
T Consensus        43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV  122 (822)
T PLN02876         43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI  122 (822)
T ss_pred             EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence            56678898999998775543   467777765432 123456778999999985 6654  6777777654   468999


Q ss_pred             EeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhcc
Q 039276          107 LECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHF  147 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~  147 (263)
                      ||++++..+.+-.   ....+..++..+..+++..|+.||.
T Consensus       123 ME~v~G~~~~~~~---~~~~~~~~r~~l~~~l~~~La~LH~  160 (822)
T PLN02876        123 MEYLEGRIFVDPK---LPGVAPERRRAIYRATAKVLAALHS  160 (822)
T ss_pred             EEecCCcccCCcc---CCCCCHHHHHHHHHHHHHHHHHHhC
Confidence            9999885543211   1124566677788889999999885

>PRK10593 hypothetical protein; Provisional

Probab=97.05  E-value=0.0089  Score=49.99  Aligned_cols=106  Identities=9%  Similarity=0.004  Sum_probs=75.4

Q ss_pred             ccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCC---CcceeEeeEeec---CCeeEEEE
Q 039276           34 FSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRH---QNLIKIISSCSK---DDFKALIL  107 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h---~~i~~~~~~~~~---~~~~~lv~  107 (263)
                      ....+.||.|..+.||.....++ ++++|..+..  .....+..|.+.++.+..   ..+.++++.+.+   .+..++||
T Consensus        16 ~~~~~~i~~G~~~~vy~~~~~~~-~~~~k~~~~~--~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVm   92 (297)
T PRK10593         16 LSRVECISEQPYAALWALYDSQG-NPMPLMARSF--STPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLL   92 (297)
T ss_pred             hheeeecCCccceeEEEEEcCCC-CEEEEEeccc--ccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEE
Confidence            45567899999999999875545 5677774331  133577889999988843   357788877654   36689999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccC
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFG  148 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~  148 (263)
                      |++++.++.+. .     ........+..+++.+|+-||..
T Consensus        93 E~i~G~~~~~~-~-----~~~~~~~~l~~~l~~~La~LH~~  127 (297)
T PRK10593         93 ERLRGVSVEAP-A-----RTPERWEQLKDQIVEGLLAWHRI  127 (297)
T ss_pred             eccCCEecCCC-C-----CCHHHHHHHHHHHHHHHHHHhCC
Confidence            99999887762 1     23334456677888999999974

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=96.98  E-value=0.00028  Score=63.34  Aligned_cols=153  Identities=12%  Similarity=0.125  Sum_probs=101.9

Q ss_pred             ccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCc-ceeEeeEeecCCeeEEEEeccCC
Q 039276           34 FSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQN-LIKIISSCSKDDFKALILECMPH  112 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~-i~~~~~~~~~~~~~~lv~e~~~~  112 (263)
                      +.....+++++++++++.+-...+....+.+...     -...-++++|.+++||| .+..++.++.+....+.++++.+
T Consensus       244 s~~fh~fvK~altknpKkRptaeklL~h~fvs~~-----l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~  318 (829)
T KOG0576|consen  244 SEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT-----LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICST  318 (829)
T ss_pred             hHHHHHHHHHHhcCCCccCCChhhheeceeeccc-----hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcC
Confidence            4455567888999999877433333334443322     23345789999999999 66666666666788899999877


Q ss_pred             C-CHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccc---------------------cccccccc
Q 039276          113 G-SLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLT---------------------QIQTLATI  170 (263)
Q Consensus       113 ~-~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~---------------------~~~~~g~~  170 (263)
                      + +.........-.+...+...+...-..+++++|+-.-+|+|    ||+.                     .....+++
T Consensus       319 ~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s~~~~~~~~~~v~~~L~~~~~~~t~~~~~  394 (829)
T KOG0576|consen  319 GRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILGSEEEVKLLDFAVPPQLTRTMKPRTAIGTP  394 (829)
T ss_pred             CccccccCChhhHhhhhhhhhhhhhhhcccccccccccccCcc----cccccccccccccccCCcccCcccccccCCCCC
Confidence            6 33332222111134444556666778899999988778887    4442                     12335788


Q ss_pred             cccCc------------chhhHHHHHHHHHhCCCCCc
Q 039276          171 SYMAP------------DTYNFGIMIMETFSGKKPTI  195 (263)
Q Consensus       171 ~y~aP------------Dv~SlG~il~ell~g~~Pf~  195 (263)
                      .++||            |+||+|+-..++--|-.|-.
T Consensus       395 ~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~  431 (829)
T KOG0576|consen  395 EPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRS  431 (829)
T ss_pred             CCCCchhhcccccccCCCccCCCcchhhcCCCCCCCC
Confidence            88888            99999987778887877743

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=96.90  E-value=0.019  Score=45.63  Aligned_cols=102  Identities=20%  Similarity=0.260  Sum_probs=71.1

Q ss_pred             cceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCC--cceeEeeEe---ecCCeeEEEEeccC
Q 039276           37 SNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQ--NLIKIISSC---SKDDFKALILECMP  111 (263)
Q Consensus        37 ~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~--~i~~~~~~~---~~~~~~~lv~e~~~  111 (263)
                      .+.++.|..+.+|.....+ ..+++|.....  .....+..|..+++.+...  .+.+++...   ......+++|++++
T Consensus         2 i~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~   78 (239)
T PF01636_consen    2 IRPLSGGFSNRVYRVTTDD-GRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIP   78 (239)
T ss_dssp             EEEEEESSSSEEEEEEETT-SEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEES
T ss_pred             CccCCCCCeeeEEEEEECC-cEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEec
Confidence            3578899999999998775 69999986654  3456677888888887433  345666533   23345789999999


Q ss_pred             CCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccC
Q 039276          112 HGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFG  148 (263)
Q Consensus       112 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~  148 (263)
                      +.++..       ..+......++.++...+.-||..
T Consensus        79 g~~~~~-------~~~~~~~~~~~~~~~~~l~~lh~~  108 (239)
T PF01636_consen   79 GRPLDD-------ELSPEQRPELLRQLGRALAQLHQV  108 (239)
T ss_dssp             SEEHHH-------TSTHHHHHHHHHHHHHHHHHHHHS
T ss_pred             cccccc-------cccccccccccccchhhhhhcccc
Confidence            987776       144555566677777777777754

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=96.73  E-value=0.0063  Score=58.49  Aligned_cols=81  Identities=16%  Similarity=0.144  Sum_probs=61.2

Q ss_pred             HHHHHHHhhcCCCcceeEeeEeecCC----eeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCcc
Q 039276           76 DVECNMMKIIRHQNLIKIISSCSKDD----FKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHST  151 (263)
Q Consensus        76 ~~e~~~l~~~~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~  151 (263)
                      .-|.+.+.++.|+|++.++.+.....    ...+..|+++.-++...+..-.. .+......+..+..+|+.|+|.....
T Consensus       230 E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~~-i~~~~~r~~~~~~~~GL~~~h~~~l~  308 (1351)
T KOG1035|consen  230 EIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVGS-IPLETLRILHQKLLEGLAYLHSLSLE  308 (1351)
T ss_pred             HHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhccc-cCHHHHHHHHHHHhhhHHHHHHhccc
Confidence            34667888889999999998875442    23456677888888887766544 78888888999999999999988666


Q ss_pred             ccccCC
Q 039276          152 HLLLKE  157 (263)
Q Consensus       152 h~dlk~  157 (263)
                      |.-+..
T Consensus       309 ~v~L~~  314 (1351)
T KOG1035|consen  309 HVVLSA  314 (1351)
T ss_pred             eeEEec
Confidence            544433

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=96.37  E-value=0.036  Score=44.75  Aligned_cols=99  Identities=14%  Similarity=0.124  Sum_probs=67.7

Q ss_pred             ecccCc-eEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcC-CCcceeEeeEeecCCeeEEEEeccCCCCHhh
Q 039276           40 ISRGGF-GSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIR-HQNLIKIISSCSKDDFKALILECMPHGSLGK  117 (263)
Q Consensus        40 lg~g~~-g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~  117 (263)
                      |..|.. +.||+.... +.++++|......   ...+..|+++++.+. +--+.+++.+....+..+++||+++|.++..
T Consensus         6 ~~~g~~~~~v~~~~~~-~~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~   81 (244)
T cd05150           6 VTEGQSGATVYRLDGK-NPGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAA   81 (244)
T ss_pred             cCCCCCcCeEEEEcCC-CCcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhH
Confidence            445544 688988754 4788888876543   334667888888873 4456677777766667899999999987764


Q ss_pred             hhhhCCCcccHHHHHHHHHHHHHHHHHhccCC
Q 039276          118 CLSTSNYILDFFQRLHIMIDVASAVEYLHFGH  149 (263)
Q Consensus       118 ~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~  149 (263)
                      ...       ......++.++...++.||...
T Consensus        82 ~~~-------~~~~~~~~~~l~~~l~~lH~i~  106 (244)
T cd05150          82 LWE-------ELEPERLVDALAEALRRLHALP  106 (244)
T ss_pred             hhc-------ccCHHHHHHHHHHHHHHHhcCC
Confidence            321       1122356778888888888653

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=96.13  E-value=0.017  Score=44.80  Aligned_cols=84  Identities=20%  Similarity=0.226  Sum_probs=63.0

Q ss_pred             HHHHHHhhcCC-CcceeEeeEeecCCeeEEEEeccCCCCHhhh---hhhCCCcccHHHHHHHHHHHHHHHHHhcc---CC
Q 039276           77 VECNMMKIIRH-QNLIKIISSCSKDDFKALILECMPHGSLGKC---LSTSNYILDFFQRLHIMIDVASAVEYLHF---GH  149 (263)
Q Consensus        77 ~e~~~l~~~~h-~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~---l~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~  149 (263)
                      .|.-+++.+++ +++++++|+|..    +++.|+.+.+++...   +... ...+|..+.+|+.+++..+.++++   +.
T Consensus         8 ~E~lll~~l~~~~~~pk~lG~CG~----~~v~E~~~~~~~~~~~~~l~~~-~~~~w~~R~~iA~~lL~~l~~l~~~~~~~   82 (188)
T PF12260_consen    8 NEPLLLQLLQGSEPFPKLLGSCGR----FYVVEYVGAGSLYGIYRPLSQF-LQSPWEQRAKIALQLLELLEELDHGPLGF   82 (188)
T ss_pred             cHHHHHHHcCCCCCCCCeeeECCC----EEEEEeecCccccccccccccc-cccCHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence            47778888865 699999999833    678899876655321   1111 126889999999999999999997   45


Q ss_pred             ccccccCCCccccccc
Q 039276          150 STHLLLKEDQSLTQIQ  165 (263)
Q Consensus       150 i~h~dlk~~nil~~~~  165 (263)
                      +.-.|++++|+....+
T Consensus        83 ~~lcDv~~~nfgv~~~   98 (188)
T PF12260_consen   83 FYLCDVSPDNFGVNDD   98 (188)
T ss_pred             EEEeecchHHeEEeCC
Confidence            6669999999986644

Proteins in this uncharacterised family are described as transmembrane proteins.

>TIGR02721 ycfN_thiK thiamine kinase

Probab=96.04  E-value=0.047  Score=44.48  Aligned_cols=72  Identities=14%  Similarity=0.113  Sum_probs=44.2

Q ss_pred             ecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcc-eeEeeEeecCCeeEEEEeccCCCCHh
Q 039276           40 ISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNL-IKIISSCSKDDFKALILECMPHGSLG  116 (263)
Q Consensus        40 lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i-~~~~~~~~~~~~~~lv~e~~~~~~L~  116 (263)
                      +..|-.+.+|+... ++.++++|...............|.++++.+...++ .+++... .   .++|+||++|..+.
T Consensus         4 ~~~G~tn~~y~~~~-~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~-~---~~~v~e~i~G~~~~   76 (256)
T TIGR02721         4 LSGGLTNRSWRIEH-PGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVN-E---HWLLVEWLEGEVIT   76 (256)
T ss_pred             CCCcCcCCeEEEEe-CCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEe-C---CEEEEEeccCcccc
Confidence            45677778888763 467888887654322211124668888888864434 3434332 2   36899999886543

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]

Probab=95.94  E-value=0.051  Score=46.44  Aligned_cols=123  Identities=17%  Similarity=0.119  Sum_probs=77.1

Q ss_pred             ccceecccCceEEEEEEecCCceEEEEEeecCC----------------------CchHHHH----HHHHHHHhhcCCCc
Q 039276           36 ESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQY----------------------GGAFKNL----DVECNMMKIIRHQN   89 (263)
Q Consensus        36 ~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~----------------------~~~~~~~----~~e~~~l~~~~h~~   89 (263)
                      ....|..|.-+-||.++..+|..+|||+++-+.                      ...++.+    ..|++.|++++..+
T Consensus       148 inGCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~aG  227 (520)
T KOG2270|consen  148 INGCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNAG  227 (520)
T ss_pred             cccccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhcC
Confidence            344566777788999998889999999986421                      1112222    35888888887777


Q ss_pred             ceeEeeEeecCCeeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhc-cCCccccccCCCccc
Q 039276           90 LIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLH-FGHSTHLLLKEDQSL  161 (263)
Q Consensus        90 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH-~~~i~h~dlk~~nil  161 (263)
                      |...--....+  -.|||+++-. +=+..-......++...+..+-.+++..+.-|- ..++||.||..=|+|
T Consensus       228 IP~PePIlLk~--hVLVM~FlGr-dgw~aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN~L  297 (520)
T KOG2270|consen  228 IPCPEPILLKN--HVLVMEFLGR-DGWAAPKLKDASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFNLL  297 (520)
T ss_pred             CCCCCceeeec--ceEeeeeccC-CCCcCcccccccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhhhe
Confidence            55322222222  3799999853 222211112222555556666666766666554 457999999999998

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=95.38  E-value=0.095  Score=43.61  Aligned_cols=77  Identities=14%  Similarity=0.083  Sum_probs=48.8

Q ss_pred             cccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCc--ceeEeeE------eecCCeeEEE
Q 039276           35 SESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQN--LIKIISS------CSKDDFKALI  106 (263)
Q Consensus        35 ~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~--i~~~~~~------~~~~~~~~lv  106 (263)
                      ...+.+..|....+|+.... +..+++|....   .....+..|++++..+.+.+  +.+++..      ....+..+++
T Consensus        17 ~~i~~i~~G~~n~~y~v~~~-~~~~vLr~~~~---~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l   92 (296)
T cd05153          17 LSFEGISAGIENTNYFVTTD-SGRYVLTLFEK---VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAAL   92 (296)
T ss_pred             hheecccCccccceEEEEeC-CCcEEEEEcCC---CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEE
Confidence            34566777877889987654 45788898764   23455667888777774333  3343331      1223456899


Q ss_pred             EeccCCCCH
Q 039276          107 LECMPHGSL  115 (263)
Q Consensus       107 ~e~~~~~~L  115 (263)
                      +++++|..+
T Consensus        93 ~~~i~G~~~  101 (296)
T cd05153          93 VEFLAGEHL  101 (296)
T ss_pred             EEeCCCCCC
Confidence            999987654

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>PRK05231 homoserine kinase; Provisional

Probab=94.71  E-value=0.4  Score=40.36  Aligned_cols=75  Identities=15%  Similarity=0.085  Sum_probs=44.5

Q ss_pred             ccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCc--ceeEeeE------eecCCeeEEEE
Q 039276           36 ESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQN--LIKIISS------CSKDDFKALIL  107 (263)
Q Consensus        36 ~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~--i~~~~~~------~~~~~~~~lv~  107 (263)
                      ..+.++.|....+|.....++ .+++|++. .  ...+.+..+++.+..+...+  +.+.+..      ....+..++++
T Consensus        26 ~~~~l~~G~~n~~y~v~t~~g-~~vLK~~~-~--~~~~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~g~~~~l~  101 (319)
T PRK05231         26 SLKGIAEGIENSNFFLTTTQG-EYVLTLFE-R--LTAEDLPFFLGLMQHLAARGVPVPAPVARRDGAALGELAGKPAAIV  101 (319)
T ss_pred             ccchhccccccceEEEEeCCC-cEEEEEec-c--CChHHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeCCEEEEEE
Confidence            345566777778898875544 78899876 2  12344455666666553222  3333321      12245678999


Q ss_pred             eccCCCC
Q 039276          108 ECMPHGS  114 (263)
Q Consensus       108 e~~~~~~  114 (263)
                      ++++|..
T Consensus       102 ~~l~G~~  108 (319)
T PRK05231        102 TFLEGKW  108 (319)
T ss_pred             EecCCCC
Confidence            9998863

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=94.66  E-value=0.87  Score=39.78  Aligned_cols=84  Identities=17%  Similarity=0.218  Sum_probs=57.5

Q ss_pred             cceecccCceEEEEEEecCC-ceEEEEEeecC------C-CchHHHHHHHHHHHhhcC---CCcceeEeeEeecCCeeEE
Q 039276           37 SNLISRGGFGSIYKAKIQDG-MEVVVKGFNLQ------Y-GGAFKNLDVECNMMKIIR---HQNLIKIISSCSKDDFKAL  105 (263)
Q Consensus        37 ~~~lg~g~~g~v~~~~~~~~-~~v~vK~~~~~------~-~~~~~~~~~e~~~l~~~~---h~~i~~~~~~~~~~~~~~l  105 (263)
                      .+.+|.|.++.||+....+| +.++||.-...      . .-...+...|.+.|+.+.   ...+++++.+.  .+..++
T Consensus        31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D--~~~~~l  108 (401)
T PRK09550         31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYD--EELAVT  108 (401)
T ss_pred             eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCCCEE
Confidence            56789999999999997766 58999985321      1 124456667888887762   34567777663  344689


Q ss_pred             EEeccCCCC-HhhhhhhC
Q 039276          106 ILECMPHGS-LGKCLSTS  122 (263)
Q Consensus       106 v~e~~~~~~-L~~~l~~~  122 (263)
                      |||++++.. +++.+..+
T Consensus       109 VME~L~~~~~lr~~Ll~g  126 (401)
T PRK09550        109 VMEDLSDHKILRKGLIDG  126 (401)
T ss_pred             EEecCCCccHHHHHHhcC
Confidence            999998644 55555443

>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []

Probab=94.32  E-value=0.021  Score=40.75  Aligned_cols=45  Identities=16%  Similarity=0.315  Sum_probs=34.7

Q ss_pred             cceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhh
Q 039276           37 SNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKI   84 (263)
Q Consensus        37 ~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~   84 (263)
                      .++++.|+.|+||+|+..+|++||||+....   -.+.+...+.+++.
T Consensus        16 ~~PlasASiaQVh~a~l~~g~~VaVKV~rP~---i~~~i~~Dl~~l~~   60 (119)
T PF03109_consen   16 PEPLASASIAQVHRARLKDGEEVAVKVQRPG---IEEQIEADLRILRR   60 (119)
T ss_pred             cchhhheehhhheeeeecccchhhhhhcchH---HHHHHHHHHHHHHH
Confidence            6789999999999999888999999997754   33444555555543

These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=93.75  E-value=0.53  Score=37.62  Aligned_cols=100  Identities=17%  Similarity=0.165  Sum_probs=62.4

Q ss_pred             cceecccCceEEEEEEecC--CceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcc-eeEeeEeecCCeeEEEEeccCCC
Q 039276           37 SNLISRGGFGSIYKAKIQD--GMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNL-IKIISSCSKDDFKALILECMPHG  113 (263)
Q Consensus        37 ~~~lg~g~~g~v~~~~~~~--~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i-~~~~~~~~~~~~~~lv~e~~~~~  113 (263)
                      .+.|..|-.+.+|+....+  +..+++|........ ......|+.+++.+...++ ++++....    ..+++||+++.
T Consensus         3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~-~~d~~~E~~~~~~l~~~gl~P~v~~~~~----~~~l~e~i~G~   77 (235)
T cd05157           3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTEL-IIDRERELRIHKLLSKHGLAPKLYATFQ----NGLIYEFIPGR   77 (235)
T ss_pred             EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccc-eecHHHHHHHHHHHHhCCCCCeEEEEeC----CcEEEEeeCCC
Confidence            3457778888999887553  578889977543221 1223468888888854333 44444332    24899999886


Q ss_pred             CHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCc
Q 039276          114 SLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHS  150 (263)
Q Consensus       114 ~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i  150 (263)
                      ++......     .    ..++.++++.|+-+|....
T Consensus        78 ~l~~~~~~-----~----~~~~~~la~~l~~lH~~~~  105 (235)
T cd05157          78 TLEPEDLR-----N----PKIYRLIARELAKLHSIKP  105 (235)
T ss_pred             cCCHHHcc-----C----hHHHHHHHHHHHHHhcccc
Confidence            65432110     1    2356778899999997654

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=91.00  E-value=1.9  Score=35.61  Aligned_cols=45  Identities=18%  Similarity=0.083  Sum_probs=29.9

Q ss_pred             ecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcC
Q 039276           40 ISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIR   86 (263)
Q Consensus        40 lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~   86 (263)
                      .++|-...|+.....+|..+++|.-...  .....+.+|.++++.+.
T Consensus        19 ~~~g~~~~v~~i~~~~g~~~VlR~p~~~--~~~~~l~rE~~vL~~L~   63 (276)
T cd05152          19 NESGLDFQVVFAKDTDGVPWVLRIPRRP--DVSERAAAEKRVLALVR   63 (276)
T ss_pred             cCCcceeEEEEEEcCCCCeEEEEecCCH--HHHHHHHHHHHHHHHHH
Confidence            3455455667665556888888876422  23456788999998885

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=90.50  E-value=3.3  Score=34.98  Aligned_cols=67  Identities=7%  Similarity=0.094  Sum_probs=40.1

Q ss_pred             EEEEEEecCCceEEEEEeec--CCCchHHHHHHHHHHHhhcCC--CcceeEeeEeecCC--eeEEEEeccCCCCH
Q 039276           47 SIYKAKIQDGMEVVVKGFNL--QYGGAFKNLDVECNMMKIIRH--QNLIKIISSCSKDD--FKALILECMPHGSL  115 (263)
Q Consensus        47 ~v~~~~~~~~~~v~vK~~~~--~~~~~~~~~~~e~~~l~~~~h--~~i~~~~~~~~~~~--~~~lv~e~~~~~~L  115 (263)
                      .+|..... ++++++. ...  ..........+|.++++.+.-  .-+...++.|.+..  .+|.+|+++++..+
T Consensus        40 ~t~~~~~~-~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~~~veGe~~  112 (321)
T COG3173          40 DTFRLGDT-GQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVMEWVEGEVV  112 (321)
T ss_pred             ceEEEecC-CceEEEe-cCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEEEEecceec
Confidence            34444333 7778887 331  222345556678888887743  33345556665444  77999999988533

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=90.46  E-value=1.8  Score=36.10  Aligned_cols=76  Identities=22%  Similarity=0.250  Sum_probs=48.1

Q ss_pred             ccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcC---CCcceeEeeEeecCCeeEEEEecc
Q 039276           34 FSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIR---HQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~---h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      .+..+.++-|....+|+.. .++..+.||+-...   ....+..|.+-|+.+.   --.+++++++....+..++++|++
T Consensus        19 i~~~~~v~GG~i~~a~~~~-~~~~~~FvK~~~~~---~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l   94 (288)
T PF03881_consen   19 ITSIEPVSGGDINEAYRLD-TDGGSYFVKVNSES---GRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFL   94 (288)
T ss_dssp             --EEEEE--SSSSEEEEEE-TTS-EEEEEEEEGG---GCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE--
T ss_pred             eeeeEecCCCChhheEEEE-CCCccEEEEecChh---hHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEee
Confidence            4556778888889999877 55889999987732   3456777888888773   455778888887777779999998


Q ss_pred             CCC
Q 039276          111 PHG  113 (263)
Q Consensus       111 ~~~  113 (263)
                      +.+
T Consensus        95 ~~~   97 (288)
T PF03881_consen   95 EMG   97 (288)
T ss_dssp             ---
T ss_pred             cCC
Confidence            654

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=90.36  E-value=1.6  Score=35.03  Aligned_cols=99  Identities=9%  Similarity=0.080  Sum_probs=61.7

Q ss_pred             ceecccCce-EEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCC---cceeEeeEeecC---CeeEEEEecc
Q 039276           38 NLISRGGFG-SIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQ---NLIKIISSCSKD---DFKALILECM  110 (263)
Q Consensus        38 ~~lg~g~~g-~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~---~i~~~~~~~~~~---~~~~lv~e~~  110 (263)
                      +.++.|+.. .||+.    +..+++|.....  .....+..|.+.+..+...   .+.+++......   +..+++|+++
T Consensus         3 ~~~~~gG~~n~vy~~----~~~~VlR~~~~~--~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i   76 (235)
T cd05155           3 EPVDSGGTDNATFRL----GDDMSVRLPSAA--GYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWL   76 (235)
T ss_pred             eeccCCCcccceEEc----CCceEEEcCCcc--chHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEee
Confidence            456766665 58864    335777865542  2344678899998887532   344444443322   2458899999


Q ss_pred             CCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCc
Q 039276          111 PHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHS  150 (263)
Q Consensus       111 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i  150 (263)
                      +|.++.....      .  ....+..++...+.-||....
T Consensus        77 ~G~~l~~~~~------~--~~~~l~~~la~~l~~LH~i~~  108 (235)
T cd05155          77 EGETATAAAL------S--DPSEFAEDLADFLAALRQIDP  108 (235)
T ss_pred             cCCCCCcccc------C--CHHHHHHHHHHHHHHHhCCCc
Confidence            9988765321      1  122577888888889997543

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=89.45  E-value=1.9  Score=35.91  Aligned_cols=99  Identities=20%  Similarity=0.229  Sum_probs=61.6

Q ss_pred             ceecccCceEEEEEEecC-------CceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcc-eeEeeEeecCCeeEEEEec
Q 039276           38 NLISRGGFGSIYKAKIQD-------GMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNL-IKIISSCSKDDFKALILEC  109 (263)
Q Consensus        38 ~~lg~g~~g~v~~~~~~~-------~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i-~~~~~~~~~~~~~~lv~e~  109 (263)
                      +.+..|-...+|+....+       +..+++|...... ........|.+++..+...++ .+++..+. +   .+|+|+
T Consensus         4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~-~---~~v~e~   78 (302)
T cd05156           4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSV-ELLIDRERELVVFARLSERNLGPKLYGIFP-N---GRIEEF   78 (302)
T ss_pred             EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCC-cceechHHHHHHHHHHHhCCCCCceEEEeC-C---Cchhhe
Confidence            445666667888877543       5788999876543 223445678888888754333 34555443 2   357899


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCc
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHS  150 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i  150 (263)
                      ++|.++......     .    ..++.+++..|+.||....
T Consensus        79 i~G~~l~~~~~~-----~----~~~~~~ia~~L~~lH~~~~  110 (302)
T cd05156          79 IPSRTLTTEELR-----D----PDISAEIARRMAKLHSIVV  110 (302)
T ss_pred             eCCCcCCHhHcC-----C----cHHHHHHHHHHHHhhCCCC
Confidence            888665542111     1    1256688899999997654

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>PLN02756 S-methyl-5-thioribose kinase

Probab=88.80  E-value=7.3  Score=34.22  Aligned_cols=84  Identities=10%  Similarity=-0.013  Sum_probs=55.5

Q ss_pred             ccceecccCceEEEEEEecCCceEEEEEeecC-----C--CchHHHHHHHHHHHhhcC---CCcceeEeeEeecCCeeEE
Q 039276           36 ESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQ-----Y--GGAFKNLDVECNMMKIIR---HQNLIKIISSCSKDDFKAL  105 (263)
Q Consensus        36 ~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~-----~--~~~~~~~~~e~~~l~~~~---h~~i~~~~~~~~~~~~~~l  105 (263)
                      ..+.+|.|....||+.... +..++||.-...     .  .-...+-..|.+.|+.+.   ...+++++.++.+.  -++
T Consensus        36 ~~~eiggGn~N~VyrV~~~-~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~ded~--~vl  112 (418)
T PLN02756         36 KIKEVGDGNLNFVYIVVSS-SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDRTM--ALI  112 (418)
T ss_pred             eEEEcCCCceeeEEEEEcC-CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECCCC--CEE
Confidence            4667899999999998764 567889887521     1  113344445666666553   35777888887644  478


Q ss_pred             EEeccCC--CCHhhhhhhC
Q 039276          106 ILECMPH--GSLGKCLSTS  122 (263)
Q Consensus       106 v~e~~~~--~~L~~~l~~~  122 (263)
                      +||++++  ..+++-+..+
T Consensus       113 vME~L~~~~~ilr~~Ll~G  131 (418)
T PLN02756        113 GMRYLEPPHIILRKGLIAG  131 (418)
T ss_pred             EEeecCCcceehhhhhccC
Confidence            8999976  3566655443

>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]

Probab=88.38  E-value=1.8  Score=37.92  Aligned_cols=57  Identities=12%  Similarity=-0.055  Sum_probs=37.5

Q ss_pred             EEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHH-HHhccCCccccccCCCcccc
Q 039276          104 ALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAV-EYLHFGHSTHLLLKEDQSLT  162 (263)
Q Consensus       104 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l-~~lH~~~i~h~dlk~~nil~  162 (263)
                      .++-+|.++-++..+++..+  .+++....++.=.+.++ +-+--.+.+|.|+.|.||+.
T Consensus       321 vl~E~~~~Gl~v~~~v~~~~--~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVli  378 (565)
T KOG1236|consen  321 VLVETYERGLSVLRFVKWKS--QPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLI  378 (565)
T ss_pred             eeeeeccccccHHhhhhccc--ChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEE
Confidence            35666788888888887544  34444444544444443 33345689999999999994

>PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties []

Probab=88.10  E-value=2.4  Score=34.56  Aligned_cols=76  Identities=17%  Similarity=0.200  Sum_probs=53.5

Q ss_pred             cceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHH---HHHhhcCCCcceeEeeEeecCCeeEEEEecc-CC
Q 039276           37 SNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVEC---NMMKIIRHQNLIKIISSCSKDDFKALILECM-PH  112 (263)
Q Consensus        37 ~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~---~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~  112 (263)
                      ...+..|..+.|+.++..+|.++++|+........     .|.   ..|+..+-.+.+++++.-.+  .-.+++|.+ ++
T Consensus         7 ~~~~~~g~~s~V~pv~~~dG~~avLKl~~p~~~~~-----~E~~g~~~L~~w~G~GaVrll~~d~~--~~AlLLErl~~g   79 (253)
T PF04655_consen    7 DGPPAHGSSSLVVPVRRADGTPAVLKLAPPHAEAE-----HEARGEAALRWWNGRGAVRLLAADPE--RGALLLERLDPG   79 (253)
T ss_pred             CCCCCCCcceEEEEEEcCCCCeEEEEecCCcccch-----hhhhHHhHhheeCCCCceeeeccccc--cchhhhhhccCC
Confidence            34566788899999998889999999987553211     233   45777777778888876433  347888988 55


Q ss_pred             CCHhhhh
Q 039276          113 GSLGKCL  119 (263)
Q Consensus       113 ~~L~~~l  119 (263)
                      .+|.+..
T Consensus        80 ~~L~~~~   86 (253)
T PF04655_consen   80 RSLASLP   86 (253)
T ss_pred             Cchhhcc
Confidence            6776655

Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=86.69  E-value=0.64  Score=39.37  Aligned_cols=120  Identities=18%  Similarity=0.069  Sum_probs=79.9

Q ss_pred             cccccceecccCceEEEEEEecCCceEEEEEeecC------------------C--Cch--HHHHHHHHHHHhhcC-C-C
Q 039276           33 LFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQ------------------Y--GGA--FKNLDVECNMMKIIR-H-Q   88 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~------------------~--~~~--~~~~~~e~~~l~~~~-h-~   88 (263)
                      .+..++.||-|.-+-+|.+...+|++.++|.=...                  .  .-.  +-...+|++.++++. | -
T Consensus        93 v~svGnqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gf  172 (465)
T KOG2268|consen   93 VESVGNQIGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGF  172 (465)
T ss_pred             hhhhccccccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCC
Confidence            47788999999999999999888999888754211                  0  001  222346888888884 3 2


Q ss_pred             cceeEeeEeecCCeeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccc
Q 039276           89 NLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQ  163 (263)
Q Consensus        89 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~  163 (263)
                      -+++.++    .+.-++|||++.+-.|.+.-.-    .+..+   +...+..-+.-|-.+|+||+|...=||+..
T Consensus       173 pVPkpiD----~~RH~Vvmelv~g~Pl~~v~~v----~d~~~---ly~~lm~~Iv~la~~GlIHgDFNEFNimv~  236 (465)
T KOG2268|consen  173 PVPKPID----HNRHCVVMELVDGYPLRQVRHV----EDPPT---LYDDLMGLIVRLANHGLIHGDFNEFNIMVK  236 (465)
T ss_pred             CCCCccc----ccceeeHHHhhcccceeeeeec----CChHH---HHHHHHHHHHHHHHcCceecccchheeEEe
Confidence            2333343    3456899999988776654432    22222   333444556667789999999999999965

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=84.68  E-value=0.19  Score=44.43  Aligned_cols=69  Identities=19%  Similarity=0.293  Sum_probs=55.1

Q ss_pred             cccccccceecccCceEEEEEE-ecCCceEEEEEeecCCC-chHHHHHHHHHHHhhcCCCcceeEeeEeec
Q 039276           31 LFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYG-GAFKNLDVECNMMKIIRHQNLIKIISSCSK   99 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~   99 (263)
                      ..+++....+|.|+||.|+.+. ..++..++||.+..... ....+..+|...+.++.|++++.+...+..
T Consensus        48 a~~~e~~~~~~~~g~~~~~~~~n~~d~~~~avkritlkn~e~s~~rvl~~~~s~a~feh~g~~~~~ha~~~  118 (516)
T KOG1033|consen   48 ANDFEPGQCLGRGGFGVVFSAQNKADENKYAVKRITLKNREESRSRVLREVSSLAEFEHPGIKRYFHAWYE  118 (516)
T ss_pred             hccccccccccccCccccCCccccccchhhHHHHhcccchhhhhhhhhccccchhhhcccchhhheeceec
Confidence            3568889999999999999998 44566899999977643 345567778888999999999998777643

>COG3231 Aph Aminoglycoside phosphotransferase [Translation, ribosomal structure and biogenesis]

Probab=84.22  E-value=9  Score=30.80  Aligned_cols=101  Identities=13%  Similarity=0.104  Sum_probs=64.4

Q ss_pred             ecccCc-eEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcC--CCcceeEeeEeecCCeeEEEEeccCCCCHh
Q 039276           40 ISRGGF-GSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIR--HQNLIKIISSCSKDDFKALILECMPHGSLG  116 (263)
Q Consensus        40 lg~g~~-g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~--h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~  116 (263)
                      +..|.. +.||+-.....--+.+|+-...   ....+..|.+.++=+.  .-.+..+.++..+.++-+++|+-++|-++.
T Consensus        26 v~~geS~~~v~rl~a~~r~g~~~k~~~~~---~~a~L~~Ea~RlrWla~~~l~~P~V~~~~~~~~~~wLl~salpG~~~s  102 (266)
T COG3231          26 VTEGESGAGVFRLFADSRPGLYLKIASSG---PAAELEGEAARLRWLAGQGLGCPRVLGLEDDADQAWLLMSALPGEDAS  102 (266)
T ss_pred             eeccCCCCeEEEEeccCCCceEEEEecCc---chhhhhhHHHHHHHhcccCCCCCceEeeccCcchhHHhhhhcCCCccc
Confidence            344444 4677765443444556654433   4567778888777663  244556666666678889999999997776


Q ss_pred             hhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCc
Q 039276          117 KCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHS  150 (263)
Q Consensus       117 ~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i  150 (263)
                      +.-..    .+.+.+   .--++.+|..||...+
T Consensus       103 ~~~~~----~~p~r~---v~~la~aLR~LH~l~~  129 (266)
T COG3231         103 HPRYA----LDPKRA---VPLLAEALRRLHELPV  129 (266)
T ss_pred             chhhc----CCHHHH---HHHHHHHHHHHhcCCh
Confidence            54322    444443   4557899999997644

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=83.08  E-value=13  Score=31.08  Aligned_cols=79  Identities=14%  Similarity=0.086  Sum_probs=47.1

Q ss_pred             ccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCc--ceeEeeEe------ecCCeeEE
Q 039276           34 FSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQN--LIKIISSC------SKDDFKAL  105 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~--i~~~~~~~------~~~~~~~l  105 (263)
                      ......++.|....+|+....++ .+++|......  ....+..|++++..+...+  +++++...      ...+..++
T Consensus        24 ~~~i~~~~~G~~n~~y~v~t~~~-~~vLK~~~~~~--~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~  100 (307)
T TIGR00938        24 LLSLKGIAEGVENSNYLLTTDVG-RYILTLYEKRV--KAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPAC  100 (307)
T ss_pred             ceeccccCCccccceEEEEeCCC-cEEEEEecCCC--CHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEE
Confidence            33456677777788998765534 68888765432  2334556677776663222  33433321      12356789


Q ss_pred             EEeccCCCCH
Q 039276          106 ILECMPHGSL  115 (263)
Q Consensus       106 v~e~~~~~~L  115 (263)
                      ++++++|..+
T Consensus       101 l~e~i~G~~~  110 (307)
T TIGR00938       101 LVEFLQGLSV  110 (307)
T ss_pred             EEEeCCCCCC
Confidence            9999988543

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>PLN02236 choline kinase

Probab=82.12  E-value=11  Score=32.31  Aligned_cols=75  Identities=12%  Similarity=0.145  Sum_probs=47.3

Q ss_pred             cceecccCceEEEEEEecC-----CceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcce-eEeeEeecCCeeEEEEecc
Q 039276           37 SNLISRGGFGSIYKAKIQD-----GMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLI-KIISSCSKDDFKALILECM  110 (263)
Q Consensus        37 ~~~lg~g~~g~v~~~~~~~-----~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~~~~~~~~~~lv~e~~  110 (263)
                      ...+..|-...+|+..+.+     +.++++|..........+ ..+|..+++.+...++. ++++.+..+    .+.||+
T Consensus        41 i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~id-R~~E~~~~~~l~~~gl~P~~~~~~~~g----~v~efi  115 (344)
T PLN02236         41 VIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFD-RDDEIRTFECMSRHGQGPRLLGRFPNG----RVEEFI  115 (344)
T ss_pred             EEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeec-hHHHHHHHHHHHHcCCCCceEEEECCc----eEEEee
Confidence            4456567788999986432     367899987655332222 36688888888554444 555555332    578888


Q ss_pred             CCCCHh
Q 039276          111 PHGSLG  116 (263)
Q Consensus       111 ~~~~L~  116 (263)
                      ++.++.
T Consensus       116 ~g~~l~  121 (344)
T PLN02236        116 HARTLS  121 (344)
T ss_pred             CCCCCC
Confidence            765543

>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=82.04  E-value=7.6  Score=31.42  Aligned_cols=78  Identities=19%  Similarity=0.301  Sum_probs=50.2

Q ss_pred             cccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcC---CCcceeEeeEeecCCeeEEEEeccC
Q 039276           35 SESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIR---HQNLIKIISSCSKDDFKALILECMP  111 (263)
Q Consensus        35 ~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~---h~~i~~~~~~~~~~~~~~lv~e~~~  111 (263)
                      +..+.+.-|.-...|..... ..++.||+-..   .....+..|+.-|..+.   --.+.+++.+..+..+.|+|+||++
T Consensus        19 ~er~~v~gG~inea~~v~dg-~~~~FvK~n~~---~~~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~sylVle~L~   94 (286)
T COG3001          19 KEREEVSGGDINEAWRLRDG-TDPFFVKCNQR---EQLSMFTAEADGLELLARSNTITVPKVIAVGASRDHSYLVLEYLP   94 (286)
T ss_pred             hcccccCCccccceeEeecC-CcceEEEecch---hhHHHHHHHHHHHHHHHhcCCccccceEEecCCCCeeEEEEeecc
Confidence            33444444544555554333 67788886332   23456667777666664   3556778888888889999999998


Q ss_pred             CCCHh
Q 039276          112 HGSLG  116 (263)
Q Consensus       112 ~~~L~  116 (263)
                      .+.+.
T Consensus        95 ~~~~d   99 (286)
T COG3001          95 TGPLD   99 (286)
T ss_pred             CCCCC
Confidence            75444

>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B

Probab=80.45  E-value=1.9  Score=24.58  Aligned_cols=29  Identities=34%  Similarity=0.565  Sum_probs=23.4

Q ss_pred             CCCCccccccccccccccceecccCCcccc
Q 039276            1 YNRLQDSLRNSIGDLTSLKSLDLSNNNFSG   30 (263)
Q Consensus         1 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~   30 (263)
                      +|+++ .+|..+++++.+.+++++.|.+..
T Consensus        10 ~N~i~-~l~~~l~~l~~L~~L~l~~N~i~~   38 (44)
T PF12799_consen   10 NNQIT-DLPPELSNLPNLETLNLSNNPISD   38 (44)
T ss_dssp             SSS-S-SHGGHGTTCTTSSEEEETSSCCSB
T ss_pred             CCCCc-ccCchHhCCCCCCEEEecCCCCCC
Confidence            36666 688889999999999999998654

...

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	263
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		2e-14
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		3e-13
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		1e-09
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		2e-09
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		7e-09
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		1e-08
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		2e-08
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		2e-08
3kmw_A	271	Crystal Structure Of The IlkALPHA-Parvin Core Compl		2e-07
3kmu_A	271	Crystal Structure Of The IlkALPHA-Parvin Core Compl		2e-06
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		2e-06
4e4l_A	302	Jak1 Kinase (Jh1 Domain) In Complex With Compound 3		2e-06
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		2e-06
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		5e-06
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		5e-06
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		9e-06
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		1e-05
3eyg_A	290	Crystal Structures Of Jak1 And Jak2 Inhibitor Compl		1e-05
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		1e-05
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		1e-05
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		1e-05
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		1e-05
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		1e-05
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		1e-05
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		1e-05
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		1e-05
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		1e-05
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		1e-05
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		1e-05
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		1e-05
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		1e-05
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		1e-05
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		1e-05
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		1e-05
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		2e-05
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		2e-05
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		2e-05
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		3e-05
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		3e-05
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		4e-05
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		2e-04
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		2e-04
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		4e-04
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		4e-04
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		4e-04
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		4e-04
3zzw_A	289	Crystal Structure Of The Kinase Domain Of Ror2 Leng		4e-04
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		4e-04
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		4e-04
2oo8_X	317	Synthesis, Structural Analysis, And Sar Studies Of		4e-04
1fvr_A	327	Tie2 Kinase Domain Length = 327		4e-04
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		4e-04
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		4e-04
2wqb_A	324	Structure Of The Tie2 Kinase Domain In Complex With		4e-04
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		5e-04
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		5e-04
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		5e-04
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		5e-04
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		5e-04
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		6e-04
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		6e-04
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		6e-04
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		6e-04
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		6e-04
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		7e-04
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		7e-04
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		8e-04
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		8e-04
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		9e-04

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 75.5 bits (184), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 127/296 (42%), Gaps = 63/296 (21%)
Query: 17  SLKSLDLSNNNFSGLFLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQY--GGAFKN 74
           SL+ L ++++NFS        N++ RGGFG +YK ++ DG  V VK    +   GG  + 
Sbjct: 29  SLRELQVASDNFSN------KNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQ- 81
Query: 75  LDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCL---STSNYILDFFQR 131
              E  M+ +  H+NL+++   C     + L+   M +GS+  CL     S   LD+ +R
Sbjct: 82  FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKR 141
Query: 132 LHIMIDVASAVEYLHFGH-----------STHLLLKE-------DQSLTQI--------- 164
             I +  A  + YLH  H           + ++LL E       D  L ++         
Sbjct: 142 QRIALGSARGLAYLH-DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVX 200
Query: 165 -QTLATISYMAP------------DTYNFGIMIMETFSGKKP---TIKFFHGEMTLKHWV 208
                TI ++AP            D + +G+M++E  +G++           ++ L  WV
Sbjct: 201 XAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 260
Query: 209 NDLLPNSVMK-VVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM 263
             LL    ++ +V  +L          K++ +  +  +A+ CT  SP +R    E+
Sbjct: 261 KGLLKEKKLEALVDVDLQGN------YKDEEVEQLIQVALLCTQSSPMERPKMSEV 310

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 70/296 (23%), Positives = 125/296 (42%), Gaps = 63/296 (21%)
Query: 17  SLKSLDLSNNNFSGLFLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQY--GGAFKN 74
           SL+ L ++++NF         N++ RGGFG +YK ++ DG  V VK    +   GG  + 
Sbjct: 21  SLRELQVASDNFXN------KNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQ- 73
Query: 75  LDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCL---STSNYILDFFQR 131
              E  M+ +  H+NL+++   C     + L+   M +GS+  CL     S   LD+ +R
Sbjct: 74  FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKR 133
Query: 132 LHIMIDVASAVEYLHFGH-----------STHLLLKE-------DQSLTQI--------- 164
             I +  A  + YLH  H           + ++LL E       D  L ++         
Sbjct: 134 QRIALGSARGLAYLH-DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVX 192
Query: 165 -QTLATISYMAP------------DTYNFGIMIMETFSGKKP---TIKFFHGEMTLKHWV 208
                 I ++AP            D + +G+M++E  +G++           ++ L  WV
Sbjct: 193 XAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 252
Query: 209 NDLLPNSVMK-VVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM 263
             LL    ++ +V  +L          K++ +  +  +A+ CT  SP +R    E+
Sbjct: 253 KGLLKEKKLEALVDVDLQGN------YKDEEVEQLIQVALLCTQSSPMERPKMSEV 302

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/254 (24%), Positives = 101/254 (39%), Gaps = 48/254 (18%)
Query: 16  TSLKSLDLSNNNFSGLFLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNL 75
             L  L+ + NNF   FL      I  G FG +YK  ++DG +V +K    +     +  
Sbjct: 29  VPLVDLEEATNNFDHKFL------IGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEF 82
Query: 76  DVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYI---LDFFQRL 132
           + E   +   RH +L+ +I  C + +   LI + M +G+L + L  S+     + + QRL
Sbjct: 83  ETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRL 142
Query: 133 HIMIDVASAVEYLHFGHSTH-------LLLKE------------------DQSLTQIQTL 167
            I I  A  + YLH     H       +LL E                  DQ+       
Sbjct: 143 EICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVK 202
Query: 168 ATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMT-LKHWVNDLLPN 214
            T+ Y+ P            D Y+FG+++ E    +   ++    EM  L  W  +   N
Sbjct: 203 GTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNN 262
Query: 215 SVM-KVVSANLLSR 227
             + ++V  NL  +
Sbjct: 263 GQLEQIVDPNLADK 276

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/283 (22%), Positives = 105/283 (37%), Gaps = 79/283 (27%)
Query: 40  ISRGGFGSIYKAK------IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKI 93
           +  G FG ++ A+       +D M V VK        A K+   E  ++  ++H++++K 
Sbjct: 23  LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 94  ISSCSKDDFKALILECMPHGSLGKCLST---------------SNYILDFFQRLHIMIDV 138
              C   D   ++ E M HG L K L                 +   L   Q LHI   +
Sbjct: 83  YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 139 ASAVEYL---HFGH----------STHLLLK------------EDQSLTQIQTLATISYM 173
           AS + YL   HF H            +LL+K             D       T+  I +M
Sbjct: 143 ASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWM 202
Query: 174 AP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVV 220
            P            D ++FG+++ E F+ GK+P  +  + E+             +  + 
Sbjct: 203 PPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEV-------------IECIT 249
Query: 221 SANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM 263
              +L R          C   V+++ + C    P QR+N KE+
Sbjct: 250 QGRVLER-------PRVCPKEVYDVMLGCWQREPQQRLNIKEI 285

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 57.8 bits (138), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 60/254 (23%), Positives = 101/254 (39%), Gaps = 48/254 (18%)
Query: 16  TSLKSLDLSNNNFSGLFLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNL 75
             L  L+ + NNF   FL      I  G FG +YK  ++DG +V +K    +     +  
Sbjct: 29  VPLVDLEEATNNFDHKFL------IGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEF 82
Query: 76  DVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYI---LDFFQRL 132
           + E   +   RH +L+ +I  C + +   LI + M +G+L + L  S+     + + QRL
Sbjct: 83  ETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRL 142
Query: 133 HIMIDVASAVEYLHFGHSTH-------LLLKED------------------QSLTQIQTL 167
            I I  A  + YLH     H       +LL E+                  Q+       
Sbjct: 143 EICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVK 202
Query: 168 ATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMT-LKHWVNDLLPN 214
            T+ Y+ P            D Y+FG+++ E    +   ++    EM  L  W  +   N
Sbjct: 203 GTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNN 262
Query: 215 SVM-KVVSANLLSR 227
             + ++V  NL  +
Sbjct: 263 GQLEQIVDPNLADK 276

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 84/206 (40%), Gaps = 41/206 (19%)
Query: 26  NNFSGLFLFSESNLISRGGFGSIYKAKIQDGMEVVVK---GFNLQYGGAFKNLDVECNMM 82
           NNF    +    N +  GGFG +YK  + +    V K     ++      +  D E  +M
Sbjct: 25  NNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVM 84
Query: 83  KIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCLS--TSNYILDFFQRLHIMIDVAS 140
              +H+NL++++   S  D   L+   MP+GSL   LS       L +  R  I    A+
Sbjct: 85  AKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAAN 144
Query: 141 AVEYLHFGHSTH-------LLLKE------------------DQSLTQIQTLATISYMAP 175
            + +LH  H  H       +LL E                   Q++   + + T +YMAP
Sbjct: 145 GINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAP 204
Query: 176 -----------DTYNFGIMIMETFSG 190
                      D Y+FG++++E  +G
Sbjct: 205 EALRGEITPKSDIYSFGVVLLEIITG 230

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 84/206 (40%), Gaps = 41/206 (19%)
Query: 26  NNFSGLFLFSESNLISRGGFGSIYKAKIQDGMEVVVK---GFNLQYGGAFKNLDVECNMM 82
           NNF    +    N +  GGFG +YK  + +    V K     ++      +  D E  +M
Sbjct: 25  NNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVM 84
Query: 83  KIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCLS--TSNYILDFFQRLHIMIDVAS 140
              +H+NL++++   S  D   L+   MP+GSL   LS       L +  R  I    A+
Sbjct: 85  AKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAAN 144
Query: 141 AVEYLHFGHSTH-------LLLKE------------------DQSLTQIQTLATISYMAP 175
            + +LH  H  H       +LL E                   Q++   + + T +YMAP
Sbjct: 145 GINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAP 204
Query: 176 -----------DTYNFGIMIMETFSG 190
                      D Y+FG++++E  +G
Sbjct: 205 EALRGEITPKSDIYSFGVVLLEIITG 230

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 83/206 (40%), Gaps = 41/206 (19%)
Query: 26  NNFSGLFLFSESNLISRGGFGSIYKAKIQDGMEVVVK---GFNLQYGGAFKNLDVECNMM 82
           NNF    +    N +  GGFG +YK  + +    V K     ++      +  D E  +M
Sbjct: 19  NNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVM 78
Query: 83  KIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCLS--TSNYILDFFQRLHIMIDVAS 140
              +H+NL++++   S  D   L+   MP+GSL   LS       L +  R  I    A+
Sbjct: 79  AKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAAN 138
Query: 141 AVEYLHFGHSTH-------LLLKE------------------DQSLTQIQTLATISYMAP 175
            + +LH  H  H       +LL E                   Q +   + + T +YMAP
Sbjct: 139 GINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAP 198
Query: 176 -----------DTYNFGIMIMETFSG 190
                      D Y+FG++++E  +G
Sbjct: 199 EALRGEITPKSDIYSFGVVLLEIITG 224

>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Mgatp) Length = 271

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 46  GSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDV--ECNMMKIIRHQNLIKIISSC--SKDD 101
           G ++K + Q G ++VVK   ++     K+ D   EC  ++I  H N++ ++ +C      
Sbjct: 24  GELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 102 FKALILECMPHGSLGKCL-STSNYILDFFQRLHIMIDVASAVEYLH 146
              LI   MP+GSL   L   +N+++D  Q +   +D+A  + +LH
Sbjct: 83  HPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH 128

>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Apo) Length = 271

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 46  GSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDV--ECNMMKIIRHQNLIKIISSCSKD--D 101
           G ++K + Q G ++VVK   ++     K+ D   EC  ++I  H N++ ++ +C      
Sbjct: 24  GELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 102 FKALILECMPHGSLGKCL-STSNYILDFFQRLHIMIDVASAVEYLH 146
              LI    P+GSL   L   +N+++D  Q +   +D A    +LH
Sbjct: 83  HPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLH 128

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/278 (21%), Positives = 101/278 (36%), Gaps = 76/278 (27%)
Query: 40  ISRGGFGSIYKAKI------QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKI 93
           +  G FG ++ A+       QD + V VK        A K+   E  ++  ++H++++K 
Sbjct: 21  LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 94  ISSCSKDDFKALILECMPHGSLGKCLST------------SNYILDFFQRLHIMIDVASA 141
              C + D   ++ E M HG L K L                  L   Q LHI   +A+ 
Sbjct: 81  YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 142 VEYL---HFGH---STHLLLKEDQSLTQI-------------------QTLATISYMAP- 175
           + YL   HF H   +T   L  +  L +I                    T+  I +M P 
Sbjct: 141 MVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPE 200
Query: 176 -----------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSAN 223
                      D ++ G+++ E F+ GK+P  +  + E+             +  +    
Sbjct: 201 SIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEV-------------IECITQGR 247
Query: 224 LLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAK 261
           +L R          C   V+ L + C    P+ R N K
Sbjct: 248 VLQR-------PRTCPQEVYELMLGCWQREPHMRKNIK 278

>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/303 (20%), Positives = 108/303 (35%), Gaps = 74/303 (24%)
Query: 13  GDLTSLK--SLDLSNNNFSGLFLFSESNLISRGGFGSIYKAKIQD-----GMEVVVKGFN 65
           GD+ S K  + ++   +F   FL    +L   G FG +   +        G +V VK   
Sbjct: 1   GDIVSEKKPATEVDPTHFEKRFLKRIRDL-GEGHFGKVELCRYDPEGDNTGEQVAVKSLK 59
Query: 66  LQYGGA-FKNLDVECNMMKIIRHQNLIKIISSCSKDDFKA--LILECMPHGSLGKCLSTS 122
            + GG    +L  E  +++ + H+N++K    C++D      LI+E +P GSL + L  +
Sbjct: 60  PESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKN 119
Query: 123 NYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQTLATIS----------- 171
              ++  Q+L   + +   ++YL      H  L     L + +    I            
Sbjct: 120 KNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETD 179
Query: 172 ---------------------------YMAPDTYNFGIMIMETF----SGKKPTIKFF-- 198
                                      Y+A D ++FG+ + E      S   P   F   
Sbjct: 180 KEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKM 239
Query: 199 ----HGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESP 254
               HG+MT+   VN L               +E +       C   V+ L  +C    P
Sbjct: 240 IGPTHGQMTVTRLVNTL---------------KEGKRLPCPPNCPDEVYQLMRKCWEFQP 284
Query: 255 NQR 257
           + R
Sbjct: 285 SNR 287

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 83/195 (42%), Gaps = 42/195 (21%)
Query: 40  ISRGGFGSIYKAKIQDGMEVVVKGFNLQ--YGGAFKNLDVECNMMKIIRHQNLIKIISSC 97
           I  G FG++++A+   G +V VK    Q  +         E  +MK +RH N++  + + 
Sbjct: 45  IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 98  SKDDFKALILECMPHGSLGKCL--STSNYILDFFQRLHIMIDVASAVEYLHFGH------ 149
           ++    +++ E +  GSL + L  S +   LD  +RL +  DVA  + YLH  +      
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHR 163
Query: 150 ---STHLL----------------LKEDQSLTQIQTLATISYMAP------------DTY 178
              S +LL                LK    L+      T  +MAP            D Y
Sbjct: 164 NLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVY 223
Query: 179 NFGIMIMETFSGKKP 193
           +FG+++ E  + ++P
Sbjct: 224 SFGVILWELATLQQP 238

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 82/195 (42%), Gaps = 42/195 (21%)
Query: 40  ISRGGFGSIYKAKIQDGMEVVVKGFNLQ--YGGAFKNLDVECNMMKIIRHQNLIKIISSC 97
           I  G FG++++A+   G +V VK    Q  +         E  +MK +RH N++  + + 
Sbjct: 45  IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 98  SKDDFKALILECMPHGSLGKCL--STSNYILDFFQRLHIMIDVASAVEYLHFGH------ 149
           ++    +++ E +  GSL + L  S +   LD  +RL +  DVA  + YLH  +      
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHR 163
Query: 150 ---STHLL----------------LKEDQSLTQIQTLATISYMAP------------DTY 178
              S +LL                LK    L       T  +MAP            D Y
Sbjct: 164 DLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVY 223
Query: 179 NFGIMIMETFSGKKP 193
           +FG+++ E  + ++P
Sbjct: 224 SFGVILWELATLQQP 238

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/207 (23%), Positives = 80/207 (38%), Gaps = 43/207 (20%)
Query: 26  NNFSGLFLFSESNLISRGGFGSIYKAKIQDGMEVVVKGF----NLQYGGAFKNLDVECNM 81
           NNF    +    N    GGFG +YK  + +   V VK      ++      +  D E  +
Sbjct: 16  NNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEELKQQFDQEIKV 74
Query: 82  MKIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCLS--TSNYILDFFQRLHIMIDVA 139
               +H+NL++++   S  D   L+    P+GSL   LS       L +  R  I    A
Sbjct: 75  XAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAA 134
Query: 140 SAVEYLHFGHSTH-------LLLKE------------------DQSLTQIQTLATISYMA 174
           + + +LH  H  H       +LL E                   Q +   + + T +Y A
Sbjct: 135 NGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXA 194
Query: 175 P-----------DTYNFGIMIMETFSG 190
           P           D Y+FG++++E  +G
Sbjct: 195 PEALRGEITPKSDIYSFGVVLLEIITG 221

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 43/203 (21%), Positives = 78/203 (38%), Gaps = 51/203 (25%)
Query: 39  LISRGGFGSIYKAKIQDGMEVVVKGF----NLQYGGAFKNLDVECNMMKIIRHQNLIKII 94
           +I  GGFG +Y+A    G EV VK      +       +N+  E  +  +++H N+I + 
Sbjct: 14  IIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALR 72
Query: 95  SSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLH-------- 146
             C K+    L++E    G L + LS      D    ++  + +A  + YLH        
Sbjct: 73  GVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDIL--VNWAVQIARGMNYLHDEAIVPII 130
Query: 147 ---FGHSTHLLL---------------------KEDQSLTQIQTLATISYMAP------- 175
                 S  L+L                     +E    T++      ++MAP       
Sbjct: 131 HRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASM 190
Query: 176 -----DTYNFGIMIMETFSGKKP 193
                D +++G+++ E  +G+ P
Sbjct: 191 FSKGSDVWSYGVLLWELLTGEVP 213

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/280 (21%), Positives = 112/280 (40%), Gaps = 71/280 (25%)
Query: 40  ISRGGFGSIYKAK---IQDGMEVVVKGFNLQYGGA--FKNLDVECNMMKIIRHQNLIKII 94
           + +G FGS+   +   +QD    VV    LQ+      ++ + E  ++K ++H N++K  
Sbjct: 21  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 95  SSCSKDDFK--ALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYL------H 146
             C     +   LI+E +P+GSL + L      +D  + L     +   +EYL      H
Sbjct: 81  GVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIH 140
Query: 147 FGHSTHLLLKEDQSLTQIQTL--------------------ATISYMAP----------- 175
              +T  +L E+++  +I                       + I + AP           
Sbjct: 141 RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA 200
Query: 176 -DTYNFGIMIMETFS----GKKPTIKFF-------HGEMTLKHWVNDLLPNSVMKVVSAN 223
            D ++FG+++ E F+     K P  +F         G+M + H + +LL N+        
Sbjct: 201 SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI-ELLKNN-------G 252
Query: 224 LLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM 263
            L R D        C   ++ +  EC   + NQR + +++
Sbjct: 253 RLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDL 285

>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/253 (20%), Positives = 89/253 (35%), Gaps = 66/253 (26%)
Query: 56  GMEVVVKGFNLQYGG-AFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKA--LILECMPH 112
           G +V VK    + GG    +L  E  +++ + H+N++K    C++D      LI+E +P 
Sbjct: 38  GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 97
Query: 113 GSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQTLATIS- 171
           GSL + L  +   ++  Q+L   + +   ++YL      H  L     L + +    I  
Sbjct: 98  GSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGD 157
Query: 172 -------------------------------------YMAPDTYNFGIMIMETF----SG 190
                                                Y+A D ++FG+ + E      S 
Sbjct: 158 FGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSD 217
Query: 191 KKPTIKFF------HGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFN 244
             P   F       HG+MT+   VN L               +E +       C   V+ 
Sbjct: 218 SSPMALFLKMIGPTHGQMTVTRLVNTL---------------KEGKRLPCPPNCPDEVYQ 262
Query: 245 LAMECTVESPNQR 257
           L  +C    P+ R
Sbjct: 263 LMRKCWEFQPSNR 275

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/280 (21%), Positives = 111/280 (39%), Gaps = 71/280 (25%)
Query: 40  ISRGGFGSIYKAK---IQDGMEVVVKGFNLQYGGA--FKNLDVECNMMKIIRHQNLIKII 94
           + +G FGS+   +   +QD    VV    LQ+      ++ + E  ++K ++H N++K  
Sbjct: 19  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 95  SSCSKDDFK--ALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYL------H 146
             C     +   LI+E +P+GSL   L      +D  + L     +   +EYL      H
Sbjct: 79  GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIH 138
Query: 147 FGHSTHLLLKEDQSLTQIQTL--------------------ATISYMAP----------- 175
              +T  +L E+++  +I                       + I + AP           
Sbjct: 139 RNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVA 198
Query: 176 -DTYNFGIMIMETFS----GKKPTIKFF-------HGEMTLKHWVNDLLPNSVMKVVSAN 223
            D ++FG+++ E F+     K P  +F         G+M + H + +LL N+        
Sbjct: 199 SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI-ELLKNN-------G 250
Query: 224 LLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM 263
            L R D        C   ++ +  EC   + NQR + +++
Sbjct: 251 RLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDL 283

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/280 (21%), Positives = 111/280 (39%), Gaps = 71/280 (25%)
Query: 40  ISRGGFGSIYKAK---IQDGMEVVVKGFNLQYGGA--FKNLDVECNMMKIIRHQNLIKII 94
           + +G FGS+   +   +QD    VV    LQ+      ++ + E  ++K ++H N++K  
Sbjct: 23  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 95  SSCSKDDFK--ALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYL------H 146
             C     +   LI+E +P+GSL   L      +D  + L     +   +EYL      H
Sbjct: 83  GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIH 142
Query: 147 FGHSTHLLLKEDQSLTQIQTL--------------------ATISYMAP----------- 175
              +T  +L E+++  +I                       + I + AP           
Sbjct: 143 RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA 202
Query: 176 -DTYNFGIMIMETFS----GKKPTIKFF-------HGEMTLKHWVNDLLPNSVMKVVSAN 223
            D ++FG+++ E F+     K P  +F         G+M + H + +LL N+        
Sbjct: 203 SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI-ELLKNN-------G 254
Query: 224 LLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM 263
            L R D        C   ++ +  EC   + NQR + +++
Sbjct: 255 RLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDL 287

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/280 (21%), Positives = 111/280 (39%), Gaps = 71/280 (25%)
Query: 40  ISRGGFGSIYKAK---IQDGMEVVVKGFNLQYGGA--FKNLDVECNMMKIIRHQNLIKII 94
           + +G FGS+   +   +QD    VV    LQ+      ++ + E  ++K ++H N++K  
Sbjct: 21  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 95  SSCSKDDFK--ALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYL------H 146
             C     +   LI+E +P+GSL   L      +D  + L     +   +EYL      H
Sbjct: 81  GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIH 140
Query: 147 FGHSTHLLLKEDQSLTQIQTL--------------------ATISYMAP----------- 175
              +T  +L E+++  +I                       + I + AP           
Sbjct: 141 RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA 200
Query: 176 -DTYNFGIMIMETFS----GKKPTIKFF-------HGEMTLKHWVNDLLPNSVMKVVSAN 223
            D ++FG+++ E F+     K P  +F         G+M + H + +LL N+        
Sbjct: 201 SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI-ELLKNN-------G 252
Query: 224 LLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM 263
            L R D        C   ++ +  EC   + NQR + +++
Sbjct: 253 RLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDL 285

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/280 (21%), Positives = 111/280 (39%), Gaps = 71/280 (25%)
Query: 40  ISRGGFGSIYKAK---IQDGMEVVVKGFNLQYGGA--FKNLDVECNMMKIIRHQNLIKII 94
           + +G FGS+   +   +QD    VV    LQ+      ++ + E  ++K ++H N++K  
Sbjct: 18  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 95  SSCSKDDFK--ALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYL------H 146
             C     +   LI+E +P+GSL   L      +D  + L     +   +EYL      H
Sbjct: 78  GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIH 137
Query: 147 FGHSTHLLLKEDQSLTQIQTL--------------------ATISYMAP----------- 175
              +T  +L E+++  +I                       + I + AP           
Sbjct: 138 RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA 197
Query: 176 -DTYNFGIMIMETFS----GKKPTIKFF-------HGEMTLKHWVNDLLPNSVMKVVSAN 223
            D ++FG+++ E F+     K P  +F         G+M + H + +LL N+        
Sbjct: 198 SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI-ELLKNN-------G 249
Query: 224 LLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM 263
            L R D        C   ++ +  EC   + NQR + +++
Sbjct: 250 RLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDL 282

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/280 (21%), Positives = 111/280 (39%), Gaps = 71/280 (25%)
Query: 40  ISRGGFGSIYKAK---IQDGMEVVVKGFNLQYGGA--FKNLDVECNMMKIIRHQNLIKII 94
           + +G FGS+   +   +QD    VV    LQ+      ++ + E  ++K ++H N++K  
Sbjct: 17  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 95  SSCSKDDFK--ALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYL------H 146
             C     +   LI+E +P+GSL   L      +D  + L     +   +EYL      H
Sbjct: 77  GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIH 136
Query: 147 FGHSTHLLLKEDQSLTQIQTL--------------------ATISYMAP----------- 175
              +T  +L E+++  +I                       + I + AP           
Sbjct: 137 RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA 196
Query: 176 -DTYNFGIMIMETFS----GKKPTIKFF-------HGEMTLKHWVNDLLPNSVMKVVSAN 223
            D ++FG+++ E F+     K P  +F         G+M + H + +LL N+        
Sbjct: 197 SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI-ELLKNN-------G 248
Query: 224 LLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM 263
            L R D        C   ++ +  EC   + NQR + +++
Sbjct: 249 RLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDL 281

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/280 (21%), Positives = 111/280 (39%), Gaps = 71/280 (25%)
Query: 40  ISRGGFGSIYKAK---IQDGMEVVVKGFNLQYGGA--FKNLDVECNMMKIIRHQNLIKII 94
           + +G FGS+   +   +QD    VV    LQ+      ++ + E  ++K ++H N++K  
Sbjct: 25  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 95  SSCSKDDFK--ALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYL------H 146
             C     +   LI+E +P+GSL   L      +D  + L     +   +EYL      H
Sbjct: 85  GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIH 144
Query: 147 FGHSTHLLLKEDQSLTQIQTL--------------------ATISYMAP----------- 175
              +T  +L E+++  +I                       + I + AP           
Sbjct: 145 RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA 204
Query: 176 -DTYNFGIMIMETFS----GKKPTIKFF-------HGEMTLKHWVNDLLPNSVMKVVSAN 223
            D ++FG+++ E F+     K P  +F         G+M + H + +LL N+        
Sbjct: 205 SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI-ELLKNN-------G 256
Query: 224 LLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM 263
            L R D        C   ++ +  EC   + NQR + +++
Sbjct: 257 RLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDL 289

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/280 (21%), Positives = 111/280 (39%), Gaps = 71/280 (25%)
Query: 40  ISRGGFGSIYKAK---IQDGMEVVVKGFNLQYGGA--FKNLDVECNMMKIIRHQNLIKII 94
           + +G FGS+   +   +QD    VV    LQ+      ++ + E  ++K ++H N++K  
Sbjct: 24  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 95  SSCSKDDFK--ALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYL------H 146
             C     +   LI+E +P+GSL   L      +D  + L     +   +EYL      H
Sbjct: 84  GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIH 143
Query: 147 FGHSTHLLLKEDQSLTQIQTL--------------------ATISYMAP----------- 175
              +T  +L E+++  +I                       + I + AP           
Sbjct: 144 RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA 203
Query: 176 -DTYNFGIMIMETFS----GKKPTIKFF-------HGEMTLKHWVNDLLPNSVMKVVSAN 223
            D ++FG+++ E F+     K P  +F         G+M + H + +LL N+        
Sbjct: 204 SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI-ELLKNN-------G 255
Query: 224 LLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM 263
            L R D        C   ++ +  EC   + NQR + +++
Sbjct: 256 RLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDL 288

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/280 (21%), Positives = 111/280 (39%), Gaps = 71/280 (25%)
Query: 40  ISRGGFGSIYKAK---IQDGMEVVVKGFNLQYGGA--FKNLDVECNMMKIIRHQNLIKII 94
           + +G FGS+   +   +QD    VV    LQ+      ++ + E  ++K ++H N++K  
Sbjct: 18  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 95  SSCSKDDFK--ALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYL------H 146
             C     +   LI+E +P+GSL   L      +D  + L     +   +EYL      H
Sbjct: 78  GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIH 137
Query: 147 FGHSTHLLLKEDQSLTQIQTL--------------------ATISYMAP----------- 175
              +T  +L E+++  +I                       + I + AP           
Sbjct: 138 RDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVA 197
Query: 176 -DTYNFGIMIMETFS----GKKPTIKFF-------HGEMTLKHWVNDLLPNSVMKVVSAN 223
            D ++FG+++ E F+     K P  +F         G+M + H + +LL N+        
Sbjct: 198 SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI-ELLKNN-------G 249
Query: 224 LLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM 263
            L R D        C   ++ +  EC   + NQR + +++
Sbjct: 250 RLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDL 282

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/280 (21%), Positives = 111/280 (39%), Gaps = 71/280 (25%)
Query: 40  ISRGGFGSIYKAK---IQDGMEVVVKGFNLQYGGA--FKNLDVECNMMKIIRHQNLIKII 94
           + +G FGS+   +   +QD    VV    LQ+      ++ + E  ++K ++H N++K  
Sbjct: 36  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 95  SSCSKDDFK--ALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYL------H 146
             C     +   LI+E +P+GSL   L      +D  + L     +   +EYL      H
Sbjct: 96  GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIH 155
Query: 147 FGHSTHLLLKEDQSLTQIQTL--------------------ATISYMAP----------- 175
              +T  +L E+++  +I                       + I + AP           
Sbjct: 156 RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA 215
Query: 176 -DTYNFGIMIMETFS----GKKPTIKFF-------HGEMTLKHWVNDLLPNSVMKVVSAN 223
            D ++FG+++ E F+     K P  +F         G+M + H + +LL N+        
Sbjct: 216 SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI-ELLKNN-------G 267
Query: 224 LLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM 263
            L R D        C   ++ +  EC   + NQR + +++
Sbjct: 268 RLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDL 300

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/280 (21%), Positives = 111/280 (39%), Gaps = 71/280 (25%)
Query: 40  ISRGGFGSIYKAK---IQDGMEVVVKGFNLQYGGA--FKNLDVECNMMKIIRHQNLIKII 94
           + +G FGS+   +   +QD    VV    LQ+      ++ + E  ++K ++H N++K  
Sbjct: 16  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 95  SSCSKDDFK--ALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYL------H 146
             C     +   LI+E +P+GSL   L      +D  + L     +   +EYL      H
Sbjct: 76  GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIH 135
Query: 147 FGHSTHLLLKEDQSLTQIQTL--------------------ATISYMAP----------- 175
              +T  +L E+++  +I                       + I + AP           
Sbjct: 136 RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA 195
Query: 176 -DTYNFGIMIMETFS----GKKPTIKFF-------HGEMTLKHWVNDLLPNSVMKVVSAN 223
            D ++FG+++ E F+     K P  +F         G+M + H + +LL N+        
Sbjct: 196 SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI-ELLKNN-------G 247
Query: 224 LLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM 263
            L R D        C   ++ +  EC   + NQR + +++
Sbjct: 248 RLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDL 280

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/280 (21%), Positives = 111/280 (39%), Gaps = 71/280 (25%)
Query: 40  ISRGGFGSIYKAK---IQDGMEVVVKGFNLQYGGA--FKNLDVECNMMKIIRHQNLIKII 94
           + +G FGS+   +   +QD    VV    LQ+      ++ + E  ++K ++H N++K  
Sbjct: 36  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 95  SSCSKDDFK--ALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYL------H 146
             C     +   LI+E +P+GSL   L      +D  + L     +   +EYL      H
Sbjct: 96  GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIH 155
Query: 147 FGHSTHLLLKEDQSLTQIQTL--------------------ATISYMAP----------- 175
              +T  +L E+++  +I                       + I + AP           
Sbjct: 156 RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA 215
Query: 176 -DTYNFGIMIMETFS----GKKPTIKFF-------HGEMTLKHWVNDLLPNSVMKVVSAN 223
            D ++FG+++ E F+     K P  +F         G+M + H + +LL N+        
Sbjct: 216 SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI-ELLKNN-------G 267
Query: 224 LLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM 263
            L R D        C   ++ +  EC   + NQR + +++
Sbjct: 268 RLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDL 300

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/280 (21%), Positives = 111/280 (39%), Gaps = 71/280 (25%)
Query: 40  ISRGGFGSIYKAK---IQDGMEVVVKGFNLQYGGA--FKNLDVECNMMKIIRHQNLIKII 94
           + +G FGS+   +   +QD    VV    LQ+      ++ + E  ++K ++H N++K  
Sbjct: 22  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 95  SSCSKDDFK--ALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYL------H 146
             C     +   LI+E +P+GSL   L      +D  + L     +   +EYL      H
Sbjct: 82  GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIH 141
Query: 147 FGHSTHLLLKEDQSLTQIQTL--------------------ATISYMAP----------- 175
              +T  +L E+++  +I                       + I + AP           
Sbjct: 142 RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA 201
Query: 176 -DTYNFGIMIMETFS----GKKPTIKFF-------HGEMTLKHWVNDLLPNSVMKVVSAN 223
            D ++FG+++ E F+     K P  +F         G+M + H + +LL N+        
Sbjct: 202 SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI-ELLKNN-------G 253
Query: 224 LLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM 263
            L R D        C   ++ +  EC   + NQR + +++
Sbjct: 254 RLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDL 286

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/280 (21%), Positives = 111/280 (39%), Gaps = 71/280 (25%)
Query: 40  ISRGGFGSIYKAK---IQDGMEVVVKGFNLQYGGA--FKNLDVECNMMKIIRHQNLIKII 94
           + +G FGS+   +   +QD    VV    LQ+      ++ + E  ++K ++H N++K  
Sbjct: 18  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 95  SSCSKDDFK--ALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYL------H 146
             C     +   LI+E +P+GSL   L      +D  + L     +   +EYL      H
Sbjct: 78  GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIH 137
Query: 147 FGHSTHLLLKEDQSLTQIQTL--------------------ATISYMAP----------- 175
              +T  +L E+++  +I                       + I + AP           
Sbjct: 138 RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA 197
Query: 176 -DTYNFGIMIMETFS----GKKPTIKFF-------HGEMTLKHWVNDLLPNSVMKVVSAN 223
            D ++FG+++ E F+     K P  +F         G+M + H + +LL N+        
Sbjct: 198 SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI-ELLKNN-------G 249
Query: 224 LLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM 263
            L R D        C   ++ +  EC   + NQR + +++
Sbjct: 250 RLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDL 282

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/280 (21%), Positives = 111/280 (39%), Gaps = 71/280 (25%)
Query: 40  ISRGGFGSIYKAK---IQDGMEVVVKGFNLQYGGA--FKNLDVECNMMKIIRHQNLIKII 94
           + +G FGS+   +   +QD    VV    LQ+      ++ + E  ++K ++H N++K  
Sbjct: 49  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 95  SSCSKDDFK--ALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYL------H 146
             C     +   LI+E +P+GSL   L      +D  + L     +   +EYL      H
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIH 168
Query: 147 FGHSTHLLLKEDQSLTQIQTL--------------------ATISYMAP----------- 175
              +T  +L E+++  +I                       + I + AP           
Sbjct: 169 RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA 228
Query: 176 -DTYNFGIMIMETFS----GKKPTIKFF-------HGEMTLKHWVNDLLPNSVMKVVSAN 223
            D ++FG+++ E F+     K P  +F         G+M + H + +LL N+        
Sbjct: 229 SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI-ELLKNN-------G 280
Query: 224 LLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM 263
            L R D        C   ++ +  EC   + NQR + +++
Sbjct: 281 RLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDL 313

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/280 (21%), Positives = 111/280 (39%), Gaps = 71/280 (25%)
Query: 40  ISRGGFGSIYKAK---IQDGMEVVVKGFNLQYGGA--FKNLDVECNMMKIIRHQNLIKII 94
           + +G FGS+   +   +QD    VV    LQ+      ++ + E  ++K ++H N++K  
Sbjct: 21  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 95  SSCSKDDFK--ALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYL------H 146
             C     +   LI+E +P+GSL   L      +D  + L     +   +EYL      H
Sbjct: 81  GVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGTKRYIH 140
Query: 147 FGHSTHLLLKEDQSLTQIQTL--------------------ATISYMAP----------- 175
              +T  +L E+++  +I                       + I + AP           
Sbjct: 141 RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA 200
Query: 176 -DTYNFGIMIMETFS----GKKPTIKFF-------HGEMTLKHWVNDLLPNSVMKVVSAN 223
            D ++FG+++ E F+     K P  +F         G+M + H + +LL N+        
Sbjct: 201 SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI-ELLKNN-------G 252
Query: 224 LLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM 263
            L R D        C   ++ +  EC   + NQR + +++
Sbjct: 253 RLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDL 285

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/282 (20%), Positives = 102/282 (36%), Gaps = 78/282 (27%)
Query: 40  ISRGGFGSIYKAKI------QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKI 93
           +  G FG ++ A+       QD M V VK        A ++   E  ++ +++HQ++++ 
Sbjct: 20  LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 94  ISSCSKDDFKALILECMPHGSLGKCLST--------------SNYILDFFQRLHIMIDVA 139
              C++     ++ E M HG L + L +              +   L   Q L +   VA
Sbjct: 80  FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 140 SAVEY---LHFGH----------STHLLLK------------EDQSLTQIQTLATISYMA 174
           + + Y   LHF H             L++K             D      +T+  I +M 
Sbjct: 140 AGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMP 199
Query: 175 P------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVS 221
           P            D ++FG+++ E F+ GK+P  +                  S  + + 
Sbjct: 200 PESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQL-----------------SNTEAID 242
Query: 222 ANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM 263
                RE E       C   V+ +   C    P QR + K++
Sbjct: 243 CITQGRELER---PRACPPEVYAIMRGCWQREPQQRHSIKDV 281

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/282 (19%), Positives = 103/282 (36%), Gaps = 78/282 (27%)
Query: 40  ISRGGFGSIYKAKI------QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKI 93
           +  G FG ++ A+       QD M V VK        A ++   E  ++ +++HQ++++ 
Sbjct: 26  LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 94  ISSCSKDDFKALILECMPHGSLGKCLST--------------SNYILDFFQRLHIMIDVA 139
              C++     ++ E M HG L + L +              +   L   Q L +   VA
Sbjct: 86  FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 140 SAVEY---LHFGH----------STHLLLK------------EDQSLTQIQTLATISYMA 174
           + + Y   LHF H             L++K             D      +T+  I +M 
Sbjct: 146 AGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMP 205
Query: 175 P------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVS 221
           P            D ++FG+++ E F+ GK+P  +  + E             ++  +  
Sbjct: 206 PESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE-------------AIDCITQ 252
Query: 222 ANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM 263
              L R          C   V+ +   C    P QR + K++
Sbjct: 253 GRELER-------PRACPPEVYAIMRGCWQREPQQRHSIKDV 287

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/282 (20%), Positives = 102/282 (36%), Gaps = 78/282 (27%)
Query: 40  ISRGGFGSIYKAKI------QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKI 93
           +  G FG ++ A+       QD M V VK        A ++   E  ++ +++HQ++++ 
Sbjct: 49  LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 94  ISSCSKDDFKALILECMPHGSLGKCLST--------------SNYILDFFQRLHIMIDVA 139
              C++     ++ E M HG L + L +              +   L   Q L +   VA
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 140 SAVEY---LHFGH----------STHLLLK------------EDQSLTQIQTLATISYMA 174
           + + Y   LHF H             L++K             D      +T+  I +M 
Sbjct: 169 AGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMP 228
Query: 175 P------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVS 221
           P            D ++FG+++ E F+ GK+P  +                  S  + + 
Sbjct: 229 PESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQL-----------------SNTEAID 271
Query: 222 ANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM 263
                RE E       C   V+ +   C    P QR + K++
Sbjct: 272 CITQGRELER---PRACPPEVYAIMRGCWQREPQQRHSIKDV 310

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 82/201 (40%), Gaps = 49/201 (24%)
Query: 37  SNLISRGGFGSIYKAKIQDGMEV----VVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIK 92
           S  I  G FG++YK K    + V    VV     Q+  AF+N   E  +++  RH N++ 
Sbjct: 41  STRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQ-AFRN---EVAVLRKTRHVNILL 96
Query: 93  IISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTH 152
            +   +KD+  A++ +     SL K L         FQ + I    A  ++YLH  +  H
Sbjct: 97  FMGYMTKDNL-AIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIH 155
Query: 153 LLLKED-----QSLT-------------------QI-QTLATISYMAP------------ 175
             +K +     + LT                   Q+ Q   ++ +MAP            
Sbjct: 156 RDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFS 215
Query: 176 ---DTYNFGIMIMETFSGKKP 193
              D Y++GI++ E  +G+ P
Sbjct: 216 FQSDVYSYGIVLYELMTGELP 236

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/265 (21%), Positives = 90/265 (33%), Gaps = 74/265 (27%)
Query: 40  ISRGGFGSIYKAKIQ-DGMEVVVKGFNLQYGGAFK-NLDVECNMMKIIRHQNLIKIISSC 97
           I RG FG ++  +++ D   V VK          K     E  ++K   H N++++I  C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 98  SKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKE 157
           ++     +++E +  G     L T    L     L ++ D A+ +EYL      H  L  
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAA 241
Query: 158 DQSLTQIQTLATIS-------------------------YMAP------------DTYNF 180
              L   + +  IS                         + AP            D ++F
Sbjct: 242 RNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSF 301
Query: 181 GIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTK---- 235
           GI++ ETFS G  P                             NL +++   F+ K    
Sbjct: 302 GILLWETFSLGASPY---------------------------PNLSNQQTREFVEKGGRL 334
Query: 236 ---EQCMSFVFNLAMECTVESPNQR 257
              E C   VF L  +C    P QR
Sbjct: 335 PCPELCPDAVFRLMEQCWAYEPGQR 359

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/265 (21%), Positives = 90/265 (33%), Gaps = 74/265 (27%)
Query: 40  ISRGGFGSIYKAKIQ-DGMEVVVKGFNLQYGGAFK-NLDVECNMMKIIRHQNLIKIISSC 97
           I RG FG ++  +++ D   V VK          K     E  ++K   H N++++I  C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 98  SKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKE 157
           ++     +++E +  G     L T    L     L ++ D A+ +EYL      H  L  
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAA 241
Query: 158 DQSLTQIQTLATIS-------------------------YMAP------------DTYNF 180
              L   + +  IS                         + AP            D ++F
Sbjct: 242 RNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSF 301
Query: 181 GIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTK---- 235
           GI++ ETFS G  P                             NL +++   F+ K    
Sbjct: 302 GILLWETFSLGASPY---------------------------PNLSNQQTREFVEKGGRL 334
Query: 236 ---EQCMSFVFNLAMECTVESPNQR 257
              E C   VF L  +C    P QR
Sbjct: 335 PCPELCPDAVFRLMEQCWAYEPGQR 359

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 94/225 (41%), Gaps = 58/225 (25%)
Query: 43  GGFGSIYKAKIQD---GMEVVVKGFNL---QYGGAFKNLDVECNMMKIIRHQNLIKIISS 96
           GG  ++Y A  +D    ++V +K   +   +     K  + E +    + HQN++ +I  
Sbjct: 22  GGMSTVYLA--EDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDV 79
Query: 97  CSKDDFKALILECMP----------HG--SLGKCLSTSNYILDFFQRLH----------- 133
             +DD   L++E +           HG  S+   ++ +N ILD  +  H           
Sbjct: 80  DEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKP 139
Query: 134 --IMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-QTLATISYMAP------------DTY 178
             I+ID    ++   FG +  L    + SLTQ    L T+ Y +P            D Y
Sbjct: 140 QNILIDSNKTLKIFDFGIAKAL---SETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIY 196
Query: 179 NFGIMIMETFSGKKPTIKFFHGE----MTLKHWVNDLLPNSVMKV 219
           + GI++ E   G+ P    F+GE    + +KH + D +PN    V
Sbjct: 197 SIGIVLYEMLVGEPP----FNGETAVSIAIKH-IQDSVPNVTTDV 236

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/268 (20%), Positives = 105/268 (39%), Gaps = 70/268 (26%)
Query: 40  ISRGGFGSIYKAK-IQDGMEVVVKGFNL-------QYGGAFKNLDVECNMMKIIRHQNLI 91
           I +GGFG ++K + ++D   V +K   L       +    F+    E  +M  + H N++
Sbjct: 27  IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 92  KIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFG--- 148
           K+           +++E +P G L   L    + + +  +L +M+D+A  +EY+      
Sbjct: 87  KLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPP 144
Query: 149 ------HSTHLLLKE------------DQSLTQIQTLATIS-------YMAP-------- 175
                  S ++ L+             D SL+Q Q++ ++S       +MAP        
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-QSVHSVSGLLGNFQWMAPETIGAEEE 203
Query: 176 ------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSRED 229
                 DTY+F +++    +G+ P  ++ +G                 K+   N++  E 
Sbjct: 204 SYTEKADTYSFAMILYTILTGEGPFDEYSYG-----------------KIKFINMIREEG 246
Query: 230 EHFMTKEQCMSFVFNLAMECTVESPNQR 257
                 E C   + N+   C    P +R
Sbjct: 247 LRPTIPEDCPPRLRNVIELCWSGDPKKR 274

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/190 (22%), Positives = 78/190 (41%), Gaps = 38/190 (20%)
Query: 40  ISRGGFGSIYKA-KIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCS 98
           I +G  G++Y A  +  G EV ++  NLQ     + +  E  +M+  ++ N++  + S  
Sbjct: 28  IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 99  KDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKED 158
             D   +++E +  GSL   ++ +   +D  Q   +  +   A+E+LH     H  +K D
Sbjct: 88  VGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSD 145
Query: 159 QSL---------------TQI--------QTLATISYMAP------------DTYNFGIM 183
             L                QI        + + T  +MAP            D ++ GIM
Sbjct: 146 NILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIM 205
Query: 184 IMETFSGKKP 193
            +E   G+ P
Sbjct: 206 AIEMIEGEPP 215

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/190 (22%), Positives = 77/190 (40%), Gaps = 38/190 (20%)
Query: 40  ISRGGFGSIYKA-KIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCS 98
           I +G  G++Y A  +  G EV ++  NLQ     + +  E  +M+  ++ N++  + S  
Sbjct: 28  IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 99  KDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKED 158
             D   +++E +  GSL   ++ +   +D  Q   +  +   A+E+LH     H  +K D
Sbjct: 88  VGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSD 145
Query: 159 QSL---------------TQIQT--------LATISYMAP------------DTYNFGIM 183
             L                QI          + T  +MAP            D ++ GIM
Sbjct: 146 NILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIM 205
Query: 184 IMETFSGKKP 193
            +E   G+ P
Sbjct: 206 AIEMIEGEPP 215

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/190 (22%), Positives = 77/190 (40%), Gaps = 38/190 (20%)
Query: 40  ISRGGFGSIYKA-KIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCS 98
           I +G  G++Y A  +  G EV ++  NLQ     + +  E  +M+  ++ N++  + S  
Sbjct: 29  IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 99  KDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKED 158
             D   +++E +  GSL   ++ +   +D  Q   +  +   A+E+LH     H  +K D
Sbjct: 89  VGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSD 146
Query: 159 QSL---------------TQIQT--------LATISYMAP------------DTYNFGIM 183
             L                QI          + T  +MAP            D ++ GIM
Sbjct: 147 NILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIM 206
Query: 184 IMETFSGKKP 193
            +E   G+ P
Sbjct: 207 AIEMIEGEPP 216

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/190 (22%), Positives = 77/190 (40%), Gaps = 38/190 (20%)
Query: 40  ISRGGFGSIYKA-KIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCS 98
           I +G  G++Y A  +  G EV ++  NLQ     + +  E  +M+  ++ N++  + S  
Sbjct: 29  IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 99  KDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKED 158
             D   +++E +  GSL   ++ +   +D  Q   +  +   A+E+LH     H  +K D
Sbjct: 89  VGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQVIHRNIKSD 146
Query: 159 QSL---------------TQIQT--------LATISYMAP------------DTYNFGIM 183
             L                QI          + T  +MAP            D ++ GIM
Sbjct: 147 NILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIM 206
Query: 184 IMETFSGKKP 193
            +E   G+ P
Sbjct: 207 AIEMIEGEPP 216

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/190 (22%), Positives = 77/190 (40%), Gaps = 38/190 (20%)
Query: 40  ISRGGFGSIYKA-KIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCS 98
           I +G  G++Y A  +  G EV ++  NLQ     + +  E  +M+  ++ N++  + S  
Sbjct: 28  IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 99  KDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKED 158
             D   +++E +  GSL   ++ +   +D  Q   +  +   A+E+LH     H  +K D
Sbjct: 88  VGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSD 145
Query: 159 QSL---------------TQIQT--------LATISYMAP------------DTYNFGIM 183
             L                QI          + T  +MAP            D ++ GIM
Sbjct: 146 NILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIM 205
Query: 184 IMETFSGKKP 193
            +E   G+ P
Sbjct: 206 AIEMIEGEPP 215

>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/235 (20%), Positives = 89/235 (37%), Gaps = 66/235 (28%)
Query: 72  FKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLG-----KCLSTSNYIL 126
            ++ +V C +  + + Q L  I S CS  D    ++   PH  +G     + + ++    
Sbjct: 69  LQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPP 128
Query: 127 DFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ--------------------- 165
           DF   +H++  +A+ +EYL   H  H  L     L   +                     
Sbjct: 129 DF---VHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYK 185
Query: 166 ----TLATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWV 208
               +L  I +MAP            D +++G+++ E FS G +P   +           
Sbjct: 186 LLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY----------- 234
Query: 209 NDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM 263
                 S   VV    + R  +     + C ++V+ L +EC  E P++R   K++
Sbjct: 235 ------SNQDVVE---MIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDI 280

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/135 (21%), Positives = 64/135 (47%), Gaps = 8/135 (5%)
Query: 34  FSESNLISRGGFGSIYKAK-IQDGMEVVVKGFN---LQYGGAFKNLDVECNMMKIIRHQN 89
           F   NL+ +G F  +Y+A+ I  G+EV +K  +   +   G  + +  E  +   ++H +
Sbjct: 13  FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPS 72
Query: 90  LIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGH 149
           ++++ +     ++  L+LE   +G + + L          +  H M  + + + YLH   
Sbjct: 73  ILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH--- 129
Query: 150 STHLLLKEDQSLTQI 164
            +H +L  D +L+ +
Sbjct: 130 -SHGILHRDLTLSNL 143

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 80/199 (40%), Gaps = 51/199 (25%)
Query: 40  ISRGGFGSIYKAKIQDGMEVVVKGFNL-----QYGGAFKNLDVECNMMKIIRHQNLIKII 94
           I  G FG++YK K     +V VK  N+     Q   AFKN   E  +++  RH N++  +
Sbjct: 20  IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKN---EVGVLRKTRHVNILLFM 74
Query: 95  SSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFG------ 148
              +K    A++ +     SL   L  S    +  + + I    A  ++YLH        
Sbjct: 75  GYSTKPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRD 133
Query: 149 -HSTHLLLKEDQSLT-----------------QIQTLA-TISYMAP-------------- 175
             S ++ L ED ++                  Q + L+ +I +MAP              
Sbjct: 134 LKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 193
Query: 176 -DTYNFGIMIMETFSGKKP 193
            D Y FGI++ E  +G+ P
Sbjct: 194 SDVYAFGIVLYELMTGQLP 212

>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 57/134 (42%), Gaps = 32/134 (23%)
Query: 38  NLISRGGFGSIYKAKIQ-DGM----------EVVVKGFNLQYGGAFKNLDVECNMMKIIR 86
           ++I  G FG + KA+I+ DG+          E   K  +  + G    L+V C   K+  
Sbjct: 21  DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAG---ELEVLC---KLGH 74
Query: 87  HQNLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYI---------------LDFFQR 131
           H N+I ++ +C    +  L +E  PHG+L   L  S  +               L   Q 
Sbjct: 75  HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 132 LHIMIDVASAVEYL 145
           LH   DVA  ++YL
Sbjct: 135 LHFAADVARGMDYL 148

>pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 57/134 (42%), Gaps = 32/134 (23%)
Query: 38  NLISRGGFGSIYKAKIQ-DGM----------EVVVKGFNLQYGGAFKNLDVECNMMKIIR 86
           ++I  G FG + KA+I+ DG+          E   K  +  + G    L+V C   K+  
Sbjct: 31  DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAG---ELEVLC---KLGH 84
Query: 87  HQNLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYI---------------LDFFQR 131
           H N+I ++ +C    +  L +E  PHG+L   L  S  +               L   Q 
Sbjct: 85  HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 132 LHIMIDVASAVEYL 145
           LH   DVA  ++YL
Sbjct: 145 LHFAADVARGMDYL 158

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 89/206 (43%), Gaps = 22/206 (10%)
Query: 78  ECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYI-LDFFQRLHIMI 136
           E  +MK I+H NL++++  C+++    +I E M +G+L   L   N   ++    L++  
Sbjct: 60  EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 119
Query: 137 DVASAVEYL---HFGH-----------STHLLLKEDQSLTQIQTLATISYMAPDTYNFGI 182
            ++SA+EYL   +F H             HL+   D  L+++ T  T  Y AP    F I
Sbjct: 120 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAPAGAKFPI 177
Query: 183 MIM--ETFSGKKPTIK---FFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQ 237
                E+ +  K +IK   +  G +  +     + P   + +     L  +D      E 
Sbjct: 178 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 237
Query: 238 CMSFVFNLAMECTVESPNQRINAKEM 263
           C   V+ L   C   +P+ R +  E+
Sbjct: 238 CPEKVYELMRACWQWNPSDRPSFAEI 263

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 80/199 (40%), Gaps = 51/199 (25%)
Query: 40  ISRGGFGSIYKAKIQDGMEVVVKGFNL-----QYGGAFKNLDVECNMMKIIRHQNLIKII 94
           I  G FG++YK K     +V VK  N+     Q   AFKN   E  +++  RH N++  +
Sbjct: 32  IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKN---EVGVLRKTRHVNILLFM 86
Query: 95  SSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFG------ 148
              +K    A++ +     SL   L  S    +  + + I    A  ++YLH        
Sbjct: 87  GYSTKPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRD 145
Query: 149 -HSTHLLLKEDQSLT-----------------QIQTLA-TISYMAP-------------- 175
             S ++ L ED ++                  Q + L+ +I +MAP              
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205
Query: 176 -DTYNFGIMIMETFSGKKP 193
            D Y FGI++ E  +G+ P
Sbjct: 206 SDVYAFGIVLYELMTGQLP 224

>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 57/134 (42%), Gaps = 32/134 (23%)
Query: 38  NLISRGGFGSIYKAKIQ-DGM----------EVVVKGFNLQYGGAFKNLDVECNMMKIIR 86
           ++I  G FG + KA+I+ DG+          E   K  +  + G    L+V C   K+  
Sbjct: 28  DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAG---ELEVLC---KLGH 81
Query: 87  HQNLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYI---------------LDFFQR 131
           H N+I ++ +C    +  L +E  PHG+L   L  S  +               L   Q 
Sbjct: 82  HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 132 LHIMIDVASAVEYL 145
           LH   DVA  ++YL
Sbjct: 142 LHFAADVARGMDYL 155

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 89/206 (43%), Gaps = 22/206 (10%)
Query: 78  ECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYI-LDFFQRLHIMI 136
           E  +MK I+H NL++++  C+++    +I E M +G+L   L   N   ++    L++  
Sbjct: 61  EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 120
Query: 137 DVASAVEYL---HFGH-----------STHLLLKEDQSLTQIQTLATISYMAPDTYNFGI 182
            ++SA+EYL   +F H             HL+   D  L+++ T  T  Y AP    F I
Sbjct: 121 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAPAGAKFPI 178
Query: 183 MIM--ETFSGKKPTIK---FFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQ 237
                E+ +  K +IK   +  G +  +     + P   + +     L  +D      E 
Sbjct: 179 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 238
Query: 238 CMSFVFNLAMECTVESPNQRINAKEM 263
           C   V+ L   C   +P+ R +  E+
Sbjct: 239 CPEKVYELMRACWQWNPSDRPSFAEI 264

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/204 (22%), Positives = 88/204 (43%), Gaps = 18/204 (8%)
Query: 78  ECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYI-LDFFQRLHIMI 136
           E  +MK I+H NL++++  C+++    +I+E M +G+L   L   N   ++    L++  
Sbjct: 60  EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 119
Query: 137 DVASAVEYL---HFGH-----------STHLLLKEDQSLTQIQTLATISYMAPDTYNFGI 182
            ++SA+EYL   +F H             HL+   D  L+++ T  T +  A   +    
Sbjct: 120 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKW 179
Query: 183 MIMETFSGKKPTIK---FFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCM 239
              E+ +  K +IK   +  G +  +     + P   + +     L  +D      E C 
Sbjct: 180 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCP 239
Query: 240 SFVFNLAMECTVESPNQRINAKEM 263
             V+ L   C   +P+ R +  E+
Sbjct: 240 EKVYELMRACWQWNPSDRPSFAEI 263

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/204 (22%), Positives = 88/204 (43%), Gaps = 18/204 (8%)
Query: 78  ECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYI-LDFFQRLHIMI 136
           E  +MK I+H NL++++  C+++    +I+E M +G+L   L   N   ++    L++  
Sbjct: 64  EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 123
Query: 137 DVASAVEYL---HFGH-----------STHLLLKEDQSLTQIQTLATISYMAPDTYNFGI 182
            ++SA+EYL   +F H             HL+   D  L+++ T  T +  A   +    
Sbjct: 124 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 183
Query: 183 MIMETFSGKKPTIK---FFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCM 239
              E+ +  K +IK   +  G +  +     + P   + +     L  +D      E C 
Sbjct: 184 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCP 243
Query: 240 SFVFNLAMECTVESPNQRINAKEM 263
             V+ L   C   +P+ R +  E+
Sbjct: 244 EKVYELMRACWQWNPSDRPSFAEI 267

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/235 (20%), Positives = 89/235 (37%), Gaps = 66/235 (28%)
Query: 72  FKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLG-----KCLSTSNYIL 126
            ++ +V C +  + + Q L  I S CS  D    ++   PH  +G     + + ++    
Sbjct: 86  LQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPP 145
Query: 127 DFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ--------------------- 165
           DF   +H++  +A+ +EYL   H  H  L     L   +                     
Sbjct: 146 DF---VHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYK 202
Query: 166 ----TLATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWV 208
               +L  I +MAP            D +++G+++ E FS G +P   +           
Sbjct: 203 LLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY----------- 251
Query: 209 NDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM 263
                 S   VV    + R  +     + C ++V+ L +EC  E P++R   K++
Sbjct: 252 ------SNQDVVE---MIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDI 297

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 54/267 (20%), Positives = 103/267 (38%), Gaps = 68/267 (25%)
Query: 40  ISRGGFGSIYKAK-IQDGMEVVVKGFNL-------QYGGAFKNLDVECNMMKIIRHQNLI 91
           I +GGFG ++K + ++D   V +K   L       +    F+    E  +M  + H N++
Sbjct: 27  IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 92  KIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHST 151
           K+           +++E +P G L   L    + + +  +L +M+D+A  +EY+   +  
Sbjct: 87  KLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPP 144
Query: 152 --HLLLKED----QSL--------------TQIQTLATIS-------YMAP--------- 175
             H  L+      QSL              T  Q++ ++S       +MAP         
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGNFQWMAPETIGAEEES 204
Query: 176 -----DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDE 230
                DTY+F +++    +G+ P  ++ +G                 K+   N++  E  
Sbjct: 205 YTEKADTYSFAMILYTILTGEGPFDEYSYG-----------------KIKFINMIREEGL 247
Query: 231 HFMTKEQCMSFVFNLAMECTVESPNQR 257
                E C   + N+   C    P +R
Sbjct: 248 RPTIPEDCPPRLRNVIELCWSGDPKKR 274

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/204 (22%), Positives = 87/204 (42%), Gaps = 18/204 (8%)
Query: 78  ECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYI-LDFFQRLHIMI 136
           E  +MK I+H NL++++  C+++    +I+E M +G+L   L   N   +     L++  
Sbjct: 59  EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 118
Query: 137 DVASAVEYL---HFGH-----------STHLLLKEDQSLTQIQTLATISYMAPDTYNFGI 182
            ++SA+EYL   +F H             HL+   D  L+++ T  T +  A   +    
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 178
Query: 183 MIMETFSGKKPTIK---FFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCM 239
              E+ +  K +IK   +  G +  +     + P   + +     L  +D      E C 
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCP 238
Query: 240 SFVFNLAMECTVESPNQRINAKEM 263
             V+ L   C   +P+ R +  E+
Sbjct: 239 EKVYELMRACWQWNPSDRPSFAEI 262

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/204 (22%), Positives = 87/204 (42%), Gaps = 18/204 (8%)
Query: 78  ECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYI-LDFFQRLHIMI 136
           E  +MK I+H NL++++  C+++    +I+E M +G+L   L   N   +     L++  
Sbjct: 59  EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 118
Query: 137 DVASAVEYL---HFGH-----------STHLLLKEDQSLTQIQTLATISYMAPDTYNFGI 182
            ++SA+EYL   +F H             HL+   D  L+++ T  T +  A   +    
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 178
Query: 183 MIMETFSGKKPTIK---FFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCM 239
              E+ +  K +IK   +  G +  +     + P   + +     L  +D      E C 
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCP 238
Query: 240 SFVFNLAMECTVESPNQRINAKEM 263
             V+ L   C   +P+ R +  E+
Sbjct: 239 EKVYELMRACWQWNPSDRPSFAEI 262

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 58/268 (21%), Positives = 100/268 (37%), Gaps = 65/268 (24%)
Query: 35  SESNLISRGGFGSIYKAKIQDG---MEVVVKGFNLQYGGAFKN-LDV--ECNMMKIIRHQ 88
           +   +I  G FG +YK  ++      EV V    L+ G   K  +D   E  +M    H 
Sbjct: 47  TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 89  NLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYL--- 145
           N+I++    SK     +I E M +G+L K L   +      Q + ++  +A+ ++YL   
Sbjct: 107 NIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM 166
Query: 146 -----------------------HFGHSTHLLLKEDQSLTQIQTLATISYMAP------- 175
                                   FG S  L    + + T       I + AP       
Sbjct: 167 NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRK 226
Query: 176 -----DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSRED 229
                D ++FGI++ E  + G++P            +W  +L  + VMK ++        
Sbjct: 227 FTSASDVWSFGIVMWEVMTYGERP------------YW--ELSNHEVMKAINDGF----- 267
Query: 230 EHFMTKEQCMSFVFNLAMECTVESPNQR 257
               T   C S ++ L M+C  +   +R
Sbjct: 268 -RLPTPMDCPSAIYQLMMQCWQQERARR 294

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 61/300 (20%), Positives = 103/300 (34%), Gaps = 74/300 (24%)
Query: 8   LRNSIGDLTSLKSLDLSNNNFSGLFLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQ 67
           LRN       LK LD  +       +F     +  G +GS+YKA  ++  ++V       
Sbjct: 7   LRNP--PRRQLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIV------- 57
Query: 68  YGGAFKNLDVECNMMKIIRH---------QNLIKIISSCSKDDFKALILECMPHGSLGKC 118
              A K + VE ++ +II+           +++K   S  K+    +++E    GS+   
Sbjct: 58  ---AIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDI 114
Query: 119 LSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKE--------------------- 157
           +   N  L   +   I+      +EYLHF    H  +K                      
Sbjct: 115 IRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQ 174
Query: 158 --DQSLTQIQTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMT 203
             D    +   + T  +MAP            D ++ GI  +E   GK P          
Sbjct: 175 LTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPP---------- 224
Query: 204 LKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM 263
                 D+ P   + ++  N        F   E       +   +C V+SP QR  A ++
Sbjct: 225 ----YADIHPMRAIFMIPTN----PPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQL 276

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 53/268 (19%), Positives = 104/268 (38%), Gaps = 70/268 (26%)
Query: 40  ISRGGFGSIYKAK-IQDGMEVVVKGFNL-------QYGGAFKNLDVECNMMKIIRHQNLI 91
           I +GGFG ++K + ++D   V +K   L       +    F+    E  +M  + H N++
Sbjct: 27  IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 92  KIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFG--- 148
           K+           +++E +P G L   L    + + +  +L +M+D+A  +EY+      
Sbjct: 87  KLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPP 144
Query: 149 ------HSTHLLLKE------------DQSLTQIQTLATIS-------YMAP-------- 175
                  S ++ L+             D  L+Q Q++ ++S       +MAP        
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-QSVHSVSGLLGNFQWMAPETIGAEEE 203
Query: 176 ------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSRED 229
                 DTY+F +++    +G+ P  ++ +G                 K+   N++  E 
Sbjct: 204 SYTEKADTYSFAMILYTILTGEGPFDEYSYG-----------------KIKFINMIREEG 246
Query: 230 EHFMTKEQCMSFVFNLAMECTVESPNQR 257
                 E C   + N+   C    P +R
Sbjct: 247 LRPTIPEDCPPRLRNVIELCWSGDPKKR 274

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 46/204 (22%), Positives = 87/204 (42%), Gaps = 18/204 (8%)
Query: 78  ECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYI-LDFFQRLHIMI 136
           E  +MK I+H NL++++  C+++    +I E M +G+L   L   N   ++    L++  
Sbjct: 305 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 364
Query: 137 DVASAVEYL---HFGH-----------STHLLLKEDQSLTQIQTLATISYMAPDTYNFGI 182
            ++SA+EYL   +F H             HL+   D  L+++ T  T +  A   +    
Sbjct: 365 QISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 424
Query: 183 MIMETFSGKKPTIK---FFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCM 239
              E+ +  K +IK   +  G +  +     + P   + +     L  +D      E C 
Sbjct: 425 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCP 484
Query: 240 SFVFNLAMECTVESPNQRINAKEM 263
             V+ L   C   +P+ R +  E+
Sbjct: 485 EKVYELMRACWQWNPSDRPSFAEI 508

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 50/85 (58%), Gaps = 9/85 (10%)
Query: 34  FSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKI 93
           ++++ +I  G FG +Y+AK+ D  E+V     LQ G AFKN +++  +M+ + H N++++
Sbjct: 22  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-GKAFKNRELQ--IMRKLDHCNIVRL 78
Query: 94  ----ISSCSKDD--FKALILECMPH 112
                SS  K D  +  L+L+ +P 
Sbjct: 79  RYFFYSSGEKKDEVYLNLVLDYVPE 103

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 50/85 (58%), Gaps = 9/85 (10%)
Query: 34  FSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKI 93
           ++++ +I  G FG +Y+AK+ D  E+V     LQ G AFKN +++  +M+ + H N++++
Sbjct: 22  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-GKAFKNRELQ--IMRKLDHCNIVRL 78
Query: 94  ----ISSCSKDD--FKALILECMPH 112
                SS  K D  +  L+L+ +P 
Sbjct: 79  RYFFYSSGEKKDEVYLNLVLDYVPE 103

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 50/84 (59%), Gaps = 9/84 (10%)
Query: 34  FSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKI 93
           ++++ +I  G FG +Y+AK+ D  E+V     LQ G AFKN +++  +M+ + H N++++
Sbjct: 22  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-GKAFKNRELQ--IMRKLDHCNIVRL 78
Query: 94  ----ISSCSKDD--FKALILECMP 111
                SS  K D  +  L+L+ +P
Sbjct: 79  RYFFYSSGEKKDEVYLNLVLDYVP 102

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	263
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	2e-31
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	1e-28
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	3e-27
3soc_A	322	Activin receptor type-2A; structural genomics cons	1e-25
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	6e-23
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	2e-22
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	2e-22
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	2e-21
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	2e-20
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	4e-20
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	5e-20
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	6e-20
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	3e-19
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	4e-19
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	5e-19
3q4u_A	301	Activin receptor type-1; structural genomics conso	6e-19
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	2e-18
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	1e-17
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	3e-13
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	1e-12
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	2e-12
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	3e-12
3pls_A	298	Macrophage-stimulating protein receptor; protein k	3e-12
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	4e-12
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	4e-12
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	6e-12
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	7e-12
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	7e-12
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	8e-12
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	9e-12
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	1e-11
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	1e-11
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	2e-11
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	2e-11
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	2e-11
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	3e-11
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	3e-11
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	3e-11
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	5e-11
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	7e-11
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	7e-11
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	1e-10
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	1e-10
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	1e-10
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	1e-10
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	2e-10
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	2e-10
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	2e-10
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	2e-10
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	3e-10
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	3e-10
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	3e-10
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	3e-10
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	3e-10
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	4e-10
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	5e-10
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	5e-10
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	5e-10
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	5e-10
4aoj_A	329	High affinity nerve growth factor receptor; transf	6e-10
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	7e-10
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	8e-10
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	9e-10
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	1e-09
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	1e-09
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	2e-09
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	3e-09
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	3e-09
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	4e-09
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	4e-09
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	8e-09
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	9e-09
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	1e-08
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	1e-08
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	1e-08
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	2e-08
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	2e-08
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	2e-08
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	2e-08
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	2e-08
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	2e-08
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	3e-08
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	3e-08
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	4e-08
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	5e-08
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	6e-08
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	6e-08
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	6e-08
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	7e-08
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	8e-08
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	9e-08
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	1e-07
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	1e-07
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	2e-07
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	3e-07
2a19_B	284	Interferon-induced, double-stranded RNA-activated	4e-07
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	5e-07
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	8e-07
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	2e-06
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	3e-06
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	3e-06
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	4e-06
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	1e-05
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	1e-05
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	1e-05
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	2e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	6e-05
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	7e-05
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	7e-05
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	8e-05
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	1e-04
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	1e-04
4eco_A	636	Uncharacterized protein; leucine-rich repeats, pro	1e-04
4eco_A	636	Uncharacterized protein; leucine-rich repeats, pro	4e-04
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	1e-04
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	1e-04
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	1e-04
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	2e-04
3rgz_A	768	Protein brassinosteroid insensitive 1; phytohormon	3e-04
3rgz_A	768	Protein brassinosteroid insensitive 1; phytohormon	4e-04
3rgz_A	768	Protein brassinosteroid insensitive 1; phytohormon	5e-04
3rgz_A	768	Protein brassinosteroid insensitive 1; phytohormon	5e-04
3rgz_A	768	Protein brassinosteroid insensitive 1; phytohormon	6e-04
3rgz_A	768	Protein brassinosteroid insensitive 1; phytohormon	7e-04
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	3e-04
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	3e-04
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	3e-04
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	3e-04
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	3e-04
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	3e-04
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	4e-04
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	4e-04
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	4e-04
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	4e-04
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	4e-04
4ecn_A	876	Leucine-rich repeat protein; leucine-rich repeats,	4e-04
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	4e-04
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	4e-04
3fxi_A	605	TLR4, htoll, TOLL-like receptor 4; leucine rich re	5e-04
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	5e-04
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	5e-04
3bhy_A	283	Death-associated protein kinase 3; death associate	6e-04
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	6e-04
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	7e-04
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	7e-04
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	7e-04
1ogq_A	313	PGIP-2, polygalacturonase inhibiting protein; inhi	7e-04
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	7e-04
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	7e-04
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	8e-04
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	9e-04

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  117 bits (295), Expect = 2e-31
 Identities = 60/266 (22%), Positives = 105/266 (39%), Gaps = 48/266 (18%)

Query: 34  FSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKI 93
           F    LI  G FG +YK  ++DG +V +K    +     +  + E   +   RH +L+ +
Sbjct: 41  FDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSL 100

Query: 94  ISSCSKDDFKALILECMPHGSLGKCLSTSN---YILDFFQRLHIMIDVASAVEYLHFG-- 148
           I  C + +   LI + M +G+L + L  S+     + + QRL I I  A  + YLH    
Sbjct: 101 IGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAI 160

Query: 149 -H----STHLLLKED----------------QSLTQIQT--LATISYMAP---------- 175
            H    S ++LL E+                   T + T    T+ Y+ P          
Sbjct: 161 IHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTE 220

Query: 176 --DTYNFGIMIMETFSGKKPTIK-FFHGEMTLKHWVNDLLPNS-VMKVVSANLLSREDEH 231
             D Y+FG+++ E    +   ++      + L  W  +   N  + ++V  NL  +    
Sbjct: 221 KSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPE 280

Query: 232 FMTKEQCMSFVFNLAMECTVESPNQR 257
            + K        + A++C   S   R
Sbjct: 281 SLRK------FGDTAVKCLALSSEDR 300

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  110 bits (277), Expect = 1e-28
 Identities = 69/288 (23%), Positives = 122/288 (42%), Gaps = 59/288 (20%)

Query: 17  SLKSLDLSNNNFSGLFLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYG-GAFKNL 75
           SL+ L ++++NFS        N++ RGGFG +YK ++ DG  V VK    +   G     
Sbjct: 21  SLRELQVASDNFS------NKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQF 74

Query: 76  DVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCL---STSNYILDFFQRL 132
             E  M+ +  H+NL+++   C     + L+   M +GS+  CL     S   LD+ +R 
Sbjct: 75  QTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQ 134

Query: 133 HIMIDVASAVEYLHFG------H----STHLLLKED---------------QSLTQIQT- 166
            I +  A  + YLH        H    + ++LL E+                  T + T 
Sbjct: 135 RIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA 194

Query: 167 -LATISYMAP------------DTYNFGIMIMETFSGKKPT-IKFFHGE--MTLKHWVND 210
              TI ++AP            D + +G+M++E  +G++   +     +  + L  WV  
Sbjct: 195 VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 254

Query: 211 LLPN-SVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQR 257
           LL    +  +V  +L     +  + +      +  +A+ CT  SP +R
Sbjct: 255 LLKEKKLEALVDVDLQGNYKDEEVEQ------LIQVALLCTQSSPMER 296

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  105 bits (265), Expect = 3e-27
 Identities = 60/285 (21%), Positives = 109/285 (38%), Gaps = 53/285 (18%)

Query: 17  SLKSLDLSNNNFSGLFLFSESNLISRGGFGSIYKAKIQDGMEVVVK----GFNLQYGGAF 72
           S   L    NNF    +    N +  GGFG +YK  + +   V VK      ++      
Sbjct: 16  SFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELK 74

Query: 73  KNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNY--ILDFFQ 130
           +  D E  +M   +H+NL++++   S  D   L+   MP+GSL   LS  +    L +  
Sbjct: 75  QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 134

Query: 131 RLHIMIDVASAVEYLHFGHSTH-------LLLKED----------------QSLTQIQT- 166
           R  I    A+ + +LH  H  H       +LL E                  + T + + 
Sbjct: 135 RCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSR 194

Query: 167 -LATISYMAP-----------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLL-- 212
            + T +YMAP           D Y+FG++++E  +G    +        L     ++   
Sbjct: 195 IVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPA-VDEHREPQLLLDIKEEIEDE 253

Query: 213 PNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQR 257
             ++   +   +         +    +  ++++A +C  E  N+R
Sbjct: 254 EKTIEDYIDKKM-----NDADSTS--VEAMYSVASQCLHEKKNKR 291

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score =  102 bits (255), Expect = 1e-25
 Identities = 54/287 (18%), Positives = 95/287 (33%), Gaps = 62/287 (21%)

Query: 34  FSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKI 93
                + +RG FG ++KA++     V VK F +Q   +++N + E   +  ++H+N+++ 
Sbjct: 26  LQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQSWQN-EYEVYSLPGMKHENILQF 83

Query: 94  ISSCSKDDFKA----LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFG- 148
           I +  +         LI      GSL   L     ++ + +  HI   +A  + YLH   
Sbjct: 84  IGAEKRGTSVDVDLWLITAFHEKGSLSDFLK--ANVVSWNELCHIAETMARGLAYLHEDI 141

Query: 149 ------------H----STHLLLKED---------------QSLTQIQTLA---TISYMA 174
                       H    S ++LLK +                  +   T     T  YMA
Sbjct: 142 PGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMA 201

Query: 175 P-----------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPN--S 215
           P                 D Y  G+++ E  S            M          P+   
Sbjct: 202 PEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLED 261

Query: 216 VMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKE 262
           + +VV           +  K   M+ +     EC       R++A  
Sbjct: 262 MQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGC 308

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 93.8 bits (234), Expect = 6e-23
 Identities = 38/194 (19%), Positives = 81/194 (41%), Gaps = 41/194 (21%)

Query: 40  ISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGA--FKNLDVECNMMKIIRHQNLIKIISSC 97
           ++    G ++K + Q G ++VVK   ++       ++ + EC  ++I  H N++ ++ +C
Sbjct: 18  LNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGAC 76

Query: 98  SK--DDFKALILECMPHGSLGKCL-STSNYILDFFQRLHIMIDVASAVEYLHFG-----H 149
                    LI   MP+GSL   L   +N+++D  Q +   +D+A  + +LH        
Sbjct: 77  QSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPR 136

Query: 150 ----STHLLLKEDQ-----------SLTQIQTLATISYMAP---------------DTYN 179
               S  +++ ED            S      +   +++AP               D ++
Sbjct: 137 HALNSRSVMIDEDMTARISMADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWS 196

Query: 180 FGIMIMETFSGKKP 193
           F +++ E  + + P
Sbjct: 197 FAVLLWELVTREVP 210

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 93.8 bits (233), Expect = 2e-22
 Identities = 56/298 (18%), Positives = 91/298 (30%), Gaps = 77/298 (25%)

Query: 34  FSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKI--IRHQNLI 91
                LI RG +G++YK  + D   V VK F+      F N   E N+ ++  + H N+ 
Sbjct: 15  LKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFIN---EKNIYRVPLMEHDNIA 70

Query: 92  KIISSCSKDDFKA-----LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLH 146
           + I    +          L++E  P+GSL K LS   +  D+     +   V   + YLH
Sbjct: 71  RFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLS--LHTSDWVSSCRLAHSVTRGLAYLH 128

Query: 147 -----------------------------------FG-----HSTHLLLKEDQSLTQIQT 166
                                              FG         L+   ++    I  
Sbjct: 129 TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISE 188

Query: 167 LATISYMAP-------------------DTYNFGIMIMETFSGKKPTIKFFHGE---MTL 204
           + TI YMAP                   D Y  G++  E F                M  
Sbjct: 189 VGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAF 248

Query: 205 KHWVNDLLPNSVMK--VVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINA 260
           +  V +      M+  V       +  E +      +  +     +C  +    R+ A
Sbjct: 249 QTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTA 306

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 93.1 bits (232), Expect = 2e-22
 Identities = 48/198 (24%), Positives = 80/198 (40%), Gaps = 48/198 (24%)

Query: 40  ISRGGFGSIYKAKIQDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSC 97
           I  G FG++++A+   G +V VK    Q            E  +MK +RH N++  + + 
Sbjct: 45  IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103

Query: 98  SKDDFKALILECMPHGSLGKCL--STSNYILDFFQRLHIMIDVASAVEYLH--------- 146
           ++    +++ E +  GSL + L  S +   LD  +RL +  DVA  + YLH         
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHR 163

Query: 147 -------------------FGHSTHLLLKEDQSLTQIQTLATISYMAP------------ 175
                              FG S    LK    L+      T  +MAP            
Sbjct: 164 NLKSPNLLVDKKYTVKVCDFGLSR---LKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKS 220

Query: 176 DTYNFGIMIMETFSGKKP 193
           D Y+FG+++ E  + ++P
Sbjct: 221 DVYSFGVILWELATLQQP 238

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 89.7 bits (223), Expect = 2e-21
 Identities = 40/203 (19%), Positives = 77/203 (37%), Gaps = 51/203 (25%)

Query: 40  ISRGGFGSIYKAK-IQDGMEVVVKGFNLQ-------YGGAFKNLDVECNMMKIIRHQNLI 91
           I +GGFG ++K + ++D   V +K   L            F+    E  +M  + H N++
Sbjct: 27  IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86

Query: 92  KIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHST 151
           K+           +++E +P G L   L    + + +  +L +M+D+A  +EY+   +  
Sbjct: 87  KLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPP 144

Query: 152 --H--------LLLKEDQSLTQIQTLA-----------------TISYMAP--------- 175
             H         L   D++      +A                    +MAP         
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEES 204

Query: 176 -----DTYNFGIMIMETFSGKKP 193
                DTY+F +++    +G+ P
Sbjct: 205 YTEKADTYSFAMILYTILTGEGP 227

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 87.8 bits (218), Expect = 2e-20
 Identities = 36/273 (13%), Positives = 83/273 (30%), Gaps = 77/273 (28%)

Query: 38  NLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGG-----AFKNLDVECNMMKIIRHQNLIK 92
            LI +G FG +Y  +     EV ++  +++        AFK    E    +  RH+N++ 
Sbjct: 39  ELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKR---EVMAYRQTRHENVVL 93

Query: 93  IISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLH------ 146
            + +C      A+I       +L   +  +  +LD  +   I  ++   + YLH      
Sbjct: 94  FMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILH 153

Query: 147 -------------------FGHSTHLLLKEDQSLTQIQTLA--TISYMAP---------- 175
                              FG  +   + +         +    + ++AP          
Sbjct: 154 KDLKSKNVFYDNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDT 213

Query: 176 -----------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANL 224
                      D +  G +  E  + + P    F                +++  +   +
Sbjct: 214 EEDKLPFSKHSDVFALGTIWYELHAREWP----FKT----------QPAEAIIWQMGTGM 259

Query: 225 LSREDEHFMTKEQCMSFVFNLAMECTVESPNQR 257
                   +++      + ++ + C      +R
Sbjct: 260 KPN-----LSQIGMGKEISDILLFCWAFEQEER 287

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 86.2 bits (214), Expect = 4e-20
 Identities = 41/202 (20%), Positives = 75/202 (37%), Gaps = 51/202 (25%)

Query: 40  ISRGGFGSIYKAKIQDGMEVVVKGFNLQ----YGGAFKNLDVECNMMKIIRHQNLIKIIS 95
           I  GGFG +Y+A    G EV VK              +N+  E  +  +++H N+I +  
Sbjct: 15  IGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRG 73

Query: 96  SCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHST---H 152
            C K+    L++E    G L + LS     +     ++  + +A  + YLH        H
Sbjct: 74  VCLKEPNLCLVMEFARGGPLNRVLSGKR--IPPDILVNWAVQIARGMNYLHDEAIVPIIH 131

Query: 153 -------LLLKEDQSLTQIQT---------LA-------------TISYMAP-------- 175
                  +L+ +      +           LA               ++MAP        
Sbjct: 132 RDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMF 191

Query: 176 ----DTYNFGIMIMETFSGKKP 193
               D +++G+++ E  +G+ P
Sbjct: 192 SKGSDVWSYGVLLWELLTGEVP 213

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 86.7 bits (215), Expect = 5e-20
 Identities = 52/283 (18%), Positives = 96/283 (33%), Gaps = 62/283 (21%)

Query: 38  NLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSC 97
             I +G +G ++  K + G +V VK F      ++   + E     ++RH+N++  I++ 
Sbjct: 43  KQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEEASWFR-ETEIYQTVLMRHENILGFIAAD 100

Query: 98  SKDDFK----ALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFG----- 148
            K         LI +   +GSL   L   +  LD    L +     S + +LH       
Sbjct: 101 IKGTGSWTQLYLITDYHENGSLYDYLK--STTLDAKSMLKLAYSSVSGLCHLHTEIFSTQ 158

Query: 149 ------H----STHLLLKED--------------QSLTQIQTLA------TISYMAP--- 175
                 H    S ++L+K++               S T    +       T  YM P   
Sbjct: 159 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVL 218

Query: 176 ---------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVV 220
                          D Y+FG+++ E              ++     V        M+ +
Sbjct: 219 DESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREI 278

Query: 221 SANLLSR-EDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKE 262
                 R    +  + ++C+  +  L  EC   +P  R+ A  
Sbjct: 279 VCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALR 321

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 85.8 bits (213), Expect = 6e-20
 Identities = 47/199 (23%), Positives = 73/199 (36%), Gaps = 51/199 (25%)

Query: 40  ISRGGFGSIYKAKIQDGMEVVVKGFNLQYGG-----AFKNLDVECNMMKIIRHQNLIKII 94
           I  G FG++YK K     +V VK  N+         AFKN   E  +++  RH N++  +
Sbjct: 32  IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKN---EVGVLRKTRHVNILLFM 86

Query: 95  SSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTH-- 152
              +     A++ +     SL   L  S    +  + + I    A  ++YLH     H  
Sbjct: 87  GYSTAPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRD 145

Query: 153 -----LLLKED------------------QSLTQIQTLATISYMAP-------------- 175
                + L ED                   S    Q   +I +MAP              
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205

Query: 176 -DTYNFGIMIMETFSGKKP 193
            D Y FGI++ E  +G+ P
Sbjct: 206 SDVYAFGIVLYELMTGQLP 224

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 83.9 bits (208), Expect = 4e-19
 Identities = 40/192 (20%), Positives = 71/192 (36%), Gaps = 43/192 (22%)

Query: 40  ISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSK 99
           + RG FG + KAK     +V +K    +     K   VE   +  + H N++K+  +C  
Sbjct: 16  VGRGAFGVVCKAK-WRAKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN 72

Query: 100 DDFKALILECMPHGSLGKCLSTSN--YILDFFQRLHIMIDVASAVEYLHFG------H-- 149
                L++E    GSL   L  +           +   +  +  V YLH        H  
Sbjct: 73  P--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRD 130

Query: 150 --STHLLLKEDQSLTQI--------------QTLATISYMAP------------DTYNFG 181
               +LLL    ++ +I                  + ++MAP            D +++G
Sbjct: 131 LKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWG 190

Query: 182 IMIMETFSGKKP 193
           I++ E  + +KP
Sbjct: 191 IILWEVITRRKP 202

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 83.5 bits (207), Expect = 5e-19
 Identities = 47/269 (17%), Positives = 82/269 (30%), Gaps = 70/269 (26%)

Query: 40  ISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCS 98
           + +G FG   K    + G  +V+K          +    E  +M+ + H N++K I    
Sbjct: 18  LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77

Query: 99  KDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLH------------ 146
           KD     I E +  G+L   + + +    + QR+    D+AS + YLH            
Sbjct: 78  KDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSH 137

Query: 147 --------------FG-----------HSTHLLLKEDQSLTQIQTLATISYMAP------ 175
                         FG                 LK+     +   +    +MAP      
Sbjct: 138 NCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGR 197

Query: 176 ------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSRED 229
                 D ++FGI++ E                       D LP ++   ++        
Sbjct: 198 SYDEKVDVFSFGIVLCEIIGRVNAD--------------PDYLPRTMDFGLNVRGFLD-- 241

Query: 230 EHFMTK-EQCMSFVFNLAMECTVESPNQR 257
                    C    F + + C    P +R
Sbjct: 242 ---RYCPPNCPPSFFPITVRCCDLDPEKR 267

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 83.2 bits (206), Expect = 6e-19
 Identities = 54/283 (19%), Positives = 101/283 (35%), Gaps = 62/283 (21%)

Query: 38  NLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSC 97
             + +G +G +++   Q G  V VK F+ +   ++   + E     ++RH+N++  I+S 
Sbjct: 14  ECVGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFR-ETELYNTVMLRHENILGFIASD 71

Query: 98  SKDDFKA----LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFG----- 148
                 +    LI      GSL   L      LD    L I++ +AS + +LH       
Sbjct: 72  MTSRHSSTQLWLITHYHEMGSLYDYLQ--LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 129

Query: 149 ------H----STHLLLKEDQ---------SLTQIQTLA-----------TISYMAP--- 175
                 H    S ++L+K++          ++   Q+             T  YMAP   
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVL 189

Query: 176 ---------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWV-NDLLPNSVMKV 219
                          D + FG+++ E              +      V ND     + KV
Sbjct: 190 DETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKV 249

Query: 220 VSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKE 262
           V  +       +    +  ++ +  L  EC  ++P+ R+ A  
Sbjct: 250 VCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALR 292

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 80.2 bits (198), Expect = 1e-17
 Identities = 54/283 (19%), Positives = 101/283 (35%), Gaps = 62/283 (21%)

Query: 38  NLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSC 97
             I +G FG +++ K + G EV VK F+ +   ++   + E     ++RH+N++  I++ 
Sbjct: 48  ESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIAAD 105

Query: 98  SKDDFKA----LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGH---- 149
           +KD+       L+ +   HGSL   L+   Y +     + + +  AS + +LH       
Sbjct: 106 NKDNGTWTQLWLVSDYHEHGSLFDYLN--RYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 163

Query: 150 -----------STHLLLKED--------------QSLTQIQTLA------TISYMAP--- 175
                      S ++L+K++               S T    +A      T  YMAP   
Sbjct: 164 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 223

Query: 176 ---------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWV-NDLLPNSVMKV 219
                          D Y  G++  E              ++     V +D     + KV
Sbjct: 224 DDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKV 283

Query: 220 VSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKE 262
           V    L     +     + +  +  +  EC   +   R+ A  
Sbjct: 284 VCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALR 326

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 67.0 bits (164), Expect = 3e-13
 Identities = 20/116 (17%), Positives = 47/116 (40%), Gaps = 8/116 (6%)

Query: 39  LISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSC 97
            +  GGF  +   + + DG    +K          +    E +M ++  H N++++++ C
Sbjct: 36  KLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYC 95

Query: 98  SKDDFKA----LILECMPHGSLGKCLSTSNYILDFF---QRLHIMIDVASAVEYLH 146
            ++        L+L     G+L   +       +F    Q L +++ +   +E +H
Sbjct: 96  LRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH 151

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 65.9 bits (161), Expect = 1e-12
 Identities = 51/304 (16%), Positives = 95/304 (31%), Gaps = 68/304 (22%)

Query: 3   RLQDSLRNSIGDLTSLKSLDLSNNNFSGLFLFSESNLISRGGFGSIYKAK-IQDGMEVVV 61
           RL     ++ G L + K   +       +   +    + RG FG +++ K  Q G +  V
Sbjct: 29  RLGPETEDNEGVLLTEKLKPVDYEYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAV 88

Query: 62  KGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCLST 121
           K   L+          E      +    ++ +  +  +  +  + +E +  GSLG+ +  
Sbjct: 89  KKVRLE-----VFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQ 143

Query: 122 SNYILDFFQRLHIMIDVASAVEYLH---------------------------FGHSTHL- 153
               L   + L+ +      +EYLH                           FGH+  L 
Sbjct: 144 MG-CLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQ 202

Query: 154 LLKEDQSLTQIQTLA-TISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHG 200
                +SL     +  T ++MAP            D ++   M++   +G  P       
Sbjct: 203 PDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP------- 255

Query: 201 EMTLKHWVNDLLPNSVM-KVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRIN 259
                 W        +  K+ S     RE             +     E   + P  R +
Sbjct: 256 ------W-TQYFRGPLCLKIASEPPPIREIPPSCAPL-TAQAI----QEGLRKEPVHRAS 303

Query: 260 AKEM 263
           A E+
Sbjct: 304 AMEL 307

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 64.6 bits (158), Expect = 2e-12
 Identities = 29/121 (23%), Positives = 47/121 (38%), Gaps = 9/121 (7%)

Query: 38  NLISRGGFGSIYKAKIQDG----MEVVVKGFNLQYG-GAFKNLDVECNMMKIIRHQNLIK 92
            +I RG FG +Y   + D     +   VK  N     G       E  +MK   H N++ 
Sbjct: 31  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 90

Query: 93  IISSCSKDDFKAL-ILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYL---HFG 148
           ++  C + +   L +L  M HG L   +    +       +   + VA  ++YL    F 
Sbjct: 91  LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 150

Query: 149 H 149
           H
Sbjct: 151 H 151

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 64.1 bits (157), Expect = 3e-12
 Identities = 42/193 (21%), Positives = 71/193 (36%), Gaps = 42/193 (21%)

Query: 40  ISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLD--VECNMMKIIRHQNLIKIISSC 97
           I  G FG ++     +  +V +K       GA    D   E  +M  + H  L+++   C
Sbjct: 16  IGSGQFGLVHLGYWLNKDKVAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 72

Query: 98  SKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYL---HFGH----- 149
            +     L+ E M HG L   L T   +      L + +DV   + YL      H     
Sbjct: 73  LEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAA 132

Query: 150 -----STHLLLK-----------EDQSLTQIQTLATISYMAP------------DTYNFG 181
                  + ++K           +DQ  +   T   + + +P            D ++FG
Sbjct: 133 RNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFG 192

Query: 182 IMIMETFS-GKKP 193
           +++ E FS GK P
Sbjct: 193 VLMWEVFSEGKIP 205

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 64.2 bits (157), Expect = 3e-12
 Identities = 43/272 (15%), Positives = 87/272 (31%), Gaps = 74/272 (27%)

Query: 36  ESNLISRGGFGSIYKAKIQDG----MEVVVK----GFNLQYGGAFKNLDVECNMMKIIRH 87
              +I +G FG +Y  +  D     ++  +K       +Q   AF     E  +M+ + H
Sbjct: 25  SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLR---EGLLMRGLNH 81

Query: 88  QNLIKIISSCSKDD-FKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYL- 145
            N++ +I      +    ++L  M HG L + + +          +   + VA  +EYL 
Sbjct: 82  PNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLA 141

Query: 146 --HFGH----------STHLLLK----------EDQSLTQIQTLAT----ISYMAP---- 175
              F H               +K           D+    +Q        + + A     
Sbjct: 142 EQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQ 201

Query: 176 --------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLS 226
                   D ++FG+++ E  + G  P     +  +          P  +   +      
Sbjct: 202 TYRFTTKSDVWSFGVLLWELLTRGAPP-----YRHID---------PFDLTHFL------ 241

Query: 227 REDEHFMTK-EQCMSFVFNLAMECTVESPNQR 257
                 + + E C   ++ +  +C    P  R
Sbjct: 242 -AQGRRLPQPEYCPDSLYQVMQQCWEADPAVR 272

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 63.9 bits (156), Expect = 4e-12
 Identities = 39/272 (14%), Positives = 84/272 (30%), Gaps = 71/272 (26%)

Query: 39  LISRGGFGSIYKAK-IQDGMEVVVKGFNL--QYGGAFKNLDVECNMMKIIRHQNLIKIIS 95
            I RG F ++YK    +  +EV               +    E  M+K ++H N+++   
Sbjct: 33  EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYD 92

Query: 96  SCSKDDFKA----LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLH----- 146
           S            L+ E M  G+L   L     ++           +   +++LH     
Sbjct: 93  SWESTVKGKKCIVLVTELMTSGTLKTYL-KRFKVMKIKVLRSWCRQILKGLQFLHTRTPP 151

Query: 147 ------------------------FGHSTHLLLKEDQSLTQIQTLATISYMAP------- 175
                                    G +T       +++     + T  +MAP       
Sbjct: 152 IIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAV-----IGTPEFMAPEMYEEKY 206

Query: 176 ----DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEH 231
               D Y FG+ ++E  + + P             +        + + V++ +     + 
Sbjct: 207 DESVDVYAFGMCMLEMATSEYP-------------YSECQNAAQIYRRVTSGVKPASFDK 253

Query: 232 FMTKEQCMSFVFNLAMECTVESPNQRINAKEM 263
               E     +      C  ++ ++R + K++
Sbjct: 254 VAIPE-VKEII----EGCIRQNKDERYSIKDL 280

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 64.5 bits (157), Expect = 4e-12
 Identities = 37/194 (19%), Positives = 73/194 (37%), Gaps = 40/194 (20%)

Query: 38  NLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSC 97
             + +G FG ++         V +K            L  E  +MK +RH+ L+++ +  
Sbjct: 273 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ-EAQVMKKLRHEKLVQLYAVV 331

Query: 98  SKDDFKALILECMPHGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYL---HFGH---- 149
           S++    ++ E M  GSL   L       L   Q + +   +AS + Y+   ++ H    
Sbjct: 332 SEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLR 390

Query: 150 ------STHLLLK-----------EDQSLTQIQTLATISYMAP------------DTYNF 180
                   +L+ K           +++   +      I + AP            D ++F
Sbjct: 391 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 450

Query: 181 GIMIMETFS-GKKP 193
           GI++ E  + G+ P
Sbjct: 451 GILLTELTTKGRVP 464

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 64.0 bits (156), Expect = 6e-12
 Identities = 27/124 (21%), Positives = 48/124 (38%), Gaps = 15/124 (12%)

Query: 38  NLISRGGFGSIYKAKIQDG----MEVVVK----GFNLQYGGAFKNLDVECNMMKIIRHQN 89
            +I RG FG +Y   + D     +   VK      ++     F     E  +MK   H N
Sbjct: 95  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT---EGIIMKDFSHPN 151

Query: 90  LIKIISSCSKDDFKAL-ILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYL--- 145
           ++ ++  C + +   L +L  M HG L   +    +       +   + VA  +++L   
Sbjct: 152 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 211

Query: 146 HFGH 149
            F H
Sbjct: 212 KFVH 215

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 63.5 bits (155), Expect = 7e-12
 Identities = 43/266 (16%), Positives = 94/266 (35%), Gaps = 55/266 (20%)

Query: 40  ISRGGFGSIYKAK-----IQDGMEVVVKGFNLQYGG-AFKNLDVECNMMKIIRHQNLIKI 93
           +  G FG +   +        G +V VK    + GG    +L  E  +++ + H+N++K 
Sbjct: 29  LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88

Query: 94  ISSCSKDDFKA--LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYL---HFG 148
              C++D      LI+E +P GSL + L  +   ++  Q+L   + +   ++YL    + 
Sbjct: 89  KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYV 148

Query: 149 H----------STHLLLK-----------EDQSLTQIQTLAT--ISYMAP---------- 175
           H           +   +K            D+    ++      + + AP          
Sbjct: 149 HRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYI 208

Query: 176 --DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHF 232
             D ++FG+ + E  +     +         +      +    ++  +       ++   
Sbjct: 209 ASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTL-------KEGKR 261

Query: 233 MTK-EQCMSFVFNLAMECTVESPNQR 257
           +     C   V+ L  +C    P+ R
Sbjct: 262 LPCPPNCPDEVYQLMRKCWEFQPSNR 287

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 63.0 bits (154), Expect = 7e-12
 Identities = 39/191 (20%), Positives = 74/191 (38%), Gaps = 38/191 (19%)

Query: 40  ISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSK 99
           +  G FG +   K +   +V +K          + ++ E  +M  + H+ L+++   C+K
Sbjct: 32  LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIE-EAKVMMNLSHEKLVQLYGVCTK 90

Query: 100 DDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYL---HFGH------- 149
                +I E M +G L   L    +     Q L +  DV  A+EYL    F H       
Sbjct: 91  QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARN 150

Query: 150 ---STHLLLK-----------EDQSLTQIQTLATISYMAP------------DTYNFGIM 183
              +   ++K           +D+  + + +   + +  P            D + FG++
Sbjct: 151 CLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVL 210

Query: 184 IMETFS-GKKP 193
           + E +S GK P
Sbjct: 211 MWEIYSLGKMP 221

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 63.1 bits (154), Expect = 8e-12
 Identities = 30/129 (23%), Positives = 53/129 (41%), Gaps = 23/129 (17%)

Query: 42  RGGFGSIYKAKIQDG----MEVVVKGFNLQYGGA----FKNLDVECNMMKIIRHQNLIKI 93
            G FGS+ +  ++      ++V VK   ++   +     +    E   MK   H N+I++
Sbjct: 44  EGEFGSVMEGNLKQEDGTSLKVAVK--TMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101

Query: 94  ISSCSKDDFKA-----LILECMPHGSL-----GKCLSTSNYILDFFQRLHIMIDVASAVE 143
           +  C +   +      +IL  M +G L        L T    +     L  M+D+A  +E
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161

Query: 144 YL---HFGH 149
           YL   +F H
Sbjct: 162 YLSNRNFLH 170

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 63.6 bits (155), Expect = 9e-12
 Identities = 37/194 (19%), Positives = 73/194 (37%), Gaps = 40/194 (20%)

Query: 38  NLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSC 97
             + +G FG ++         V +K            L  E  +MK +RH+ L+++ +  
Sbjct: 190 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ-EAQVMKKLRHEKLVQLYAVV 248

Query: 98  SKDDFKALILECMPHGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYL---HFGH---- 149
           S++    ++ E M  GSL   L       L   Q + +   +AS + Y+   ++ H    
Sbjct: 249 SEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLR 307

Query: 150 ------STHLLLK-----------EDQSLTQIQTLATISYMAP------------DTYNF 180
                   +L+ K           +++   +      I + AP            D ++F
Sbjct: 308 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 367

Query: 181 GIMIMETFS-GKKP 193
           GI++ E  + G+ P
Sbjct: 368 GILLTELTTKGRVP 381

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 63.2 bits (154), Expect = 1e-11
 Identities = 40/194 (20%), Positives = 72/194 (37%), Gaps = 40/194 (20%)

Query: 38  NLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSC 97
             +  G FG ++ A      +V VK            L  E N+MK ++H  L+K+ +  
Sbjct: 194 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLA-EANVMKTLQHDKLVKLHAVV 252

Query: 98  SKDDFKALILECMPHGSLGKCL-STSNYILDFFQRLHIMIDVASAVEYL---HFGH---- 149
           +K+    +I E M  GSL   L S         + +     +A  + ++   ++ H    
Sbjct: 253 TKEPI-YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLR 311

Query: 150 ------STHLLLK-----------EDQSLTQIQTLATISYMAPDTYN------------F 180
                 S  L+ K           +++   +      I + AP+  N            F
Sbjct: 312 AANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSF 371

Query: 181 GIMIMETFS-GKKP 193
           GI++ME  + G+ P
Sbjct: 372 GILLMEIVTYGRIP 385

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 62.2 bits (152), Expect = 1e-11
 Identities = 44/191 (23%), Positives = 71/191 (37%), Gaps = 38/191 (19%)

Query: 40  ISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSK 99
           +  G FG +   K +   +V VK          +    E   M  + H  L+K    CSK
Sbjct: 16  LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQ-EAQTMMKLSHPKLVKFYGVCSK 74

Query: 100 DDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYL---HFGH------- 149
           +    ++ E + +G L   L +    L+  Q L +  DV   + +L    F H       
Sbjct: 75  EYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARN 134

Query: 150 ---STHLLLK-----------EDQSLTQIQTLATISYMAP------------DTYNFGIM 183
                 L +K           +DQ ++ + T   + + AP            D + FGI+
Sbjct: 135 CLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGIL 194

Query: 184 IMETFS-GKKP 193
           + E FS GK P
Sbjct: 195 MWEVFSLGKMP 205

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 62.7 bits (153), Expect = 2e-11
 Identities = 44/189 (23%), Positives = 77/189 (40%), Gaps = 38/189 (20%)

Query: 40  ISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSK 99
           I +G FG +     + G +V VK   ++     +    E ++M  +RH NL++++    +
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVK--CIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 257

Query: 100 DDFKA-LILECMPHGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYL---HFGH----- 149
           +     ++ E M  GSL   L +    +L     L   +DV  A+EYL   +F H     
Sbjct: 258 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAA 317

Query: 150 -----STHLLLK-EDQSLTQIQTLAT------ISYMAPDTYN------------FGIMIM 185
                S   + K  D  LT+  +         + + AP+               FGI++ 
Sbjct: 318 RNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLW 377

Query: 186 ETFS-GKKP 193
           E +S G+ P
Sbjct: 378 EIYSFGRVP 386

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 61.6 bits (150), Expect = 2e-11
 Identities = 49/270 (18%), Positives = 98/270 (36%), Gaps = 69/270 (25%)

Query: 39  LISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSC 97
           ++ +G +G +Y  + + + + + +K    +     + L  E  + K ++H+N+++ + S 
Sbjct: 29  VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88

Query: 98  SKDDFKALILECMPHGSLGKCLSTSNYILDFFQRL--HIMIDVASAVEYLH--------- 146
           S++ F  + +E +P GSL   L +    L   ++        +   ++YLH         
Sbjct: 89  SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDI 148

Query: 147 ------------------FGHSTHLLLKEDQSLTQIQTLA-TISYMAP------------ 175
                             FG S  L           +T   T+ YMAP            
Sbjct: 149 KGDNVLINTYSGVLKISDFGTSKRL----AGINPCTETFTGTLQYMAPEIIDKGPRGYGK 204

Query: 176 --DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVM-KVVSANLLSREDEHF 232
             D ++ G  I+E  +GK P             +     P + M KV    +     E  
Sbjct: 205 AADIWSLGCTIIEMATGKPP-------------FYELGEPQAAMFKVGMFKVHPEIPESM 251

Query: 233 MTKEQCMSFVFNLAMECTVESPNQRINAKE 262
               +  +F+    ++C    P++R  A +
Sbjct: 252 --SAEAKAFI----LKCFEPDPDKRACAND 275

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 62.0 bits (151), Expect = 2e-11
 Identities = 31/131 (23%), Positives = 54/131 (41%), Gaps = 26/131 (19%)

Query: 42  RGGFGSIYKAKIQDG----MEVVVKGFNLQYGGAFKNLDV-----ECNMMKIIRHQNLIK 92
           +G FGS+ +A+++      ++V VK           + D+     E   MK   H ++ K
Sbjct: 33  KGEFGSVREAQLKQEDGSFVKVAVKMLK---ADIIASSDIEEFLREAACMKEFDHPHVAK 89

Query: 93  IISSCSKDDFKA------LILECMPHGSLGKCL-----STSNYILDFFQRLHIMIDVASA 141
           ++    +   K       +IL  M HG L   L       + + L     +  M+D+A  
Sbjct: 90  LVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACG 149

Query: 142 VEYL---HFGH 149
           +EYL   +F H
Sbjct: 150 MEYLSSRNFIH 160

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 61.9 bits (151), Expect = 3e-11
 Identities = 44/197 (22%), Positives = 72/197 (36%), Gaps = 46/197 (23%)

Query: 40  ISRGGFGSIYKAKIQ-DGMEVVVK----GFNLQYGGAFKNLDVECNMMKIIRHQNLIKII 94
           I RG FG ++  +++ D   V VK             F     E  ++K   H N++++I
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQ---EARILKQYSHPNIVRLI 178

Query: 95  SSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLH---FGH-- 149
             C++     +++E +  G     L T    L     L ++ D A+ +EYL      H  
Sbjct: 179 GVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRD 238

Query: 150 --------STHLLLK----------EDQSLTQIQTLATISY--MAP------------DT 177
                   +   +LK           D        L  +     AP            D 
Sbjct: 239 LAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDV 298

Query: 178 YNFGIMIMETFS-GKKP 193
           ++FGI++ ETFS G  P
Sbjct: 299 WSFGILLWETFSLGASP 315

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 61.5 bits (150), Expect = 3e-11
 Identities = 39/216 (18%), Positives = 73/216 (33%), Gaps = 50/216 (23%)

Query: 27  NFSGLFLFSESNL-----ISRGGFGSIYKAKIQDGME-----VVVKGFNLQYG-GAFKNL 75
           N + L +  E+       +  G FG++YK       E     V +K         A K +
Sbjct: 5   NQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI 64

Query: 76  DVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIM 135
             E  +M  + + ++ +++  C     + LI + MP G L   +      +     L+  
Sbjct: 65  LDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWC 123

Query: 136 IDVASAVEYL---HFGH----------STHLLLK------------EDQSLTQIQTLATI 170
           + +A  + YL      H           T   +K            E++          I
Sbjct: 124 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183

Query: 171 SYMAP------------DTYNFGIMIMETFS-GKKP 193
            +MA             D +++G+ + E  + G KP
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 61.2 bits (149), Expect = 3e-11
 Identities = 41/263 (15%), Positives = 84/263 (31%), Gaps = 57/263 (21%)

Query: 43  GGFGSIYKAKIQD-----GMEVVVKGFNLQYGG-AFKNLDVECNMMKIIRHQNLIKIISS 96
           G FG +            G  V VK      G         E ++++ + H+++IK    
Sbjct: 42  GHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGC 101

Query: 97  CSKDDFKA--LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYL---HFGH-- 149
           C      +  L++E +P GSL   L   +  +   Q L     +   + YL   H+ H  
Sbjct: 102 CEDAGAASLQLVMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLHAQHYIHRD 159

Query: 150 --------STHLLLK-----------EDQSLTQIQTLAT--ISYMAP------------D 176
                       L+K           E     +++      + + AP            D
Sbjct: 160 LAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASD 219

Query: 177 TYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTK 235
            ++FG+ + E  +               +      +    + +++       E    + +
Sbjct: 220 VWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELL-------ERGERLPR 272

Query: 236 -EQCMSFVFNLAMECTVESPNQR 257
            ++C + V++L   C     + R
Sbjct: 273 PDKCPAEVYHLMKNCWETEASFR 295

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 60.3 bits (147), Expect = 5e-11
 Identities = 47/191 (24%), Positives = 78/191 (40%), Gaps = 38/191 (19%)

Query: 38  NLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSC 97
             I +G FG +     + G +V VK   ++     +    E ++M  +RH NL++++   
Sbjct: 27  QTIGKGEFGDVMLGDYR-GNKVAVK--CIKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 83

Query: 98  SKDDFKALI-LECMPHGSLGKCL-STSNYILDFFQRLHIMIDVASAVEYL---HFGH--- 149
            ++     I  E M  GSL   L S    +L     L   +DV  A+EYL   +F H   
Sbjct: 84  VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDL 143

Query: 150 -------STHLLLK-------EDQSLTQIQTLATISYMAP------------DTYNFGIM 183
                  S   + K       ++ S TQ      + + AP            D ++FGI+
Sbjct: 144 AARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGIL 203

Query: 184 IMETFS-GKKP 193
           + E +S G+ P
Sbjct: 204 LWEIYSFGRVP 214

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 60.4 bits (147), Expect = 7e-11
 Identities = 49/264 (18%), Positives = 89/264 (33%), Gaps = 58/264 (21%)

Query: 43  GGFGSIYKAKI-----QDGMEVVVKGFNLQYGGAFKNLDV--ECNMMKIIRHQNLIKIIS 95
           G FGS+   +        G  V VK   LQ+ G  +  D   E  ++K +    ++K   
Sbjct: 34  GNFGSVELCRYDPLGDNTGALVAVK--QLQHSGPDQQRDFQREIQILKALHSDFIVKYRG 91

Query: 96  SCSKDDFKA--LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLH------- 146
                  ++  L++E +P G L   L      LD  + L     +   +EYL        
Sbjct: 92  VSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHR 151

Query: 147 -------------------FGHSTHLLLKEDQSLTQIQTLATISYMAP------------ 175
                              FG +  L L +D  + +    + I + AP            
Sbjct: 152 DLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQS 211

Query: 176 DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT 234
           D ++FG+++ E F+   K           +    +    + +++++       E+   + 
Sbjct: 212 DVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELL-------EEGQRLP 264

Query: 235 K-EQCMSFVFNLAMECTVESPNQR 257
               C + V  L   C   SP  R
Sbjct: 265 APPACPAEVHELMKLCWAPSPQDR 288

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 60.9 bits (148), Expect = 7e-11
 Identities = 42/195 (21%), Positives = 77/195 (39%), Gaps = 40/195 (20%)

Query: 38  NLISRGGFGSIYKAKIQD-GMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISS 96
           + +  G +G +Y+   +   + V VK          + L  E  +MK I+H NL++++  
Sbjct: 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLK-EAAVMKEIKHPNLVQLLGV 284

Query: 97  CSKDDFKALILECMPHGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYL---HFGH--- 149
           C+++    +I E M +G+L   L   N   +     L++   ++SA+EYL   +F H   
Sbjct: 285 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNL 344

Query: 150 -------STHLLLK-----------EDQSLTQIQTLATISYMAP------------DTYN 179
                    + L+K            D           I + AP            D + 
Sbjct: 345 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 404

Query: 180 FGIMIMETFS-GKKP 193
           FG+++ E  + G  P
Sbjct: 405 FGVLLWEIATYGMSP 419

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 59.6 bits (145), Expect = 1e-10
 Identities = 28/127 (22%), Positives = 51/127 (40%), Gaps = 22/127 (17%)

Query: 42  RGGFGSIYKAKIQDG------MEVVVK----GFNLQYGGAFKNLDVECNMMKIIRHQNLI 91
            G FG +Y+ ++         ++V VK      + Q      +  +E  ++    HQN++
Sbjct: 40  HGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQ---DELDFLMEALIISKFNHQNIV 96

Query: 92  KIISSCSKDDFKALILECMPHGSLGKCL------STSNYILDFFQRLHIMIDVASAVEYL 145
           + I    +   + +++E M  G L   L       +    L     LH+  D+A   +YL
Sbjct: 97  RCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156

Query: 146 ---HFGH 149
              HF H
Sbjct: 157 EENHFIH 163

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 59.2 bits (144), Expect = 1e-10
 Identities = 59/281 (20%), Positives = 100/281 (35%), Gaps = 83/281 (29%)

Query: 43  GGFGSIYKA------KIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISS 96
           G FG ++ A        +D M V VK        A K+   E  ++  ++H++++K    
Sbjct: 26  GAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGV 85

Query: 97  CSKDDFKALILECMPHGSL---------------GKCLSTSNYILDFFQRLHIMIDVASA 141
           C   D   ++ E M HG L                     +   L   Q LHI   +AS 
Sbjct: 86  CGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASG 145

Query: 142 VEYL---HFGH----------STHLLLK----------EDQSLTQIQTLAT--ISYMAP- 175
           + YL   HF H            +LL+K                ++       I +M P 
Sbjct: 146 MVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPE 205

Query: 176 -----------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNS-VMKVVSA 222
                      D ++FG+++ E F+ GK+P    +             L N+ V++ +  
Sbjct: 206 SIMYRKFTTESDVWSFGVILWEIFTYGKQP----WFQ-----------LSNTEVIECI-- 248

Query: 223 NLLSREDEHFMTK-EQCMSFVFNLAMECTVESPNQRINAKE 262
                     + +   C   V+++ + C    P QR+N KE
Sbjct: 249 -----TQGRVLERPRVCPKEVYDVMLGCWQREPQQRLNIKE 284

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 59.2 bits (144), Expect = 1e-10
 Identities = 35/199 (17%), Positives = 71/199 (35%), Gaps = 48/199 (24%)

Query: 40  ISRGGFGSIYKAKIQDG---MEVVVKGFNLQYGGAFKNLDV---ECNMMKIIRHQNLIKI 93
           +  G FGS+ +   +     ++V +K   L+ G    + +    E  +M  + +  ++++
Sbjct: 18  LGCGNFGSVRQGVYRMRKKQIDVAIK--VLKQGTEKADTEEMMREAQIMHQLDNPYIVRL 75

Query: 94  ISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYL------H- 146
           I  C  +    L++E    G L K L      +       ++  V+  ++YL      H 
Sbjct: 76  IGVCQAEALM-LVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHR 134

Query: 147 -------------------FGHSTHLLLKEDQSLTQIQTLATISYMAP------------ 175
                              FG S  L   +     +      + + AP            
Sbjct: 135 DLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRS 194

Query: 176 DTYNFGIMIMETFS-GKKP 193
           D +++G+ + E  S G+KP
Sbjct: 195 DVWSYGVTMWEALSYGQKP 213

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 59.2 bits (144), Expect = 1e-10
 Identities = 24/119 (20%), Positives = 50/119 (42%), Gaps = 11/119 (9%)

Query: 42  RGGFGSIYKAKIQD--------GMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKI 93
           +G F  I+K   ++          EV++K  +  +    ++     +MM  + H++L+  
Sbjct: 18  QGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLN 77

Query: 94  ISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYL---HFGH 149
              C   D   L+ E +  GSL   L  +   ++   +L +   +A+A+ +L      H
Sbjct: 78  YGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIH 136

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 59.2 bits (144), Expect = 2e-10
 Identities = 43/198 (21%), Positives = 64/198 (32%), Gaps = 47/198 (23%)

Query: 42  RGGFGSIYKA--KIQDGMEVVV-----KGFNLQYGGAFKNLDVECNMMKIIRHQNLIKII 94
            G FG + +       G  V V     K   L    A  +   E N M  + H+NLI++ 
Sbjct: 28  DGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLY 87

Query: 95  SSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYL------H-- 146
                   K ++ E  P GSL   L                + VA  + YL      H  
Sbjct: 88  GVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRD 146

Query: 147 ------------------FGHSTHLLLKEDQSLTQIQTLATISYMAP------------D 176
                             FG    L   +D  + Q       ++ AP            D
Sbjct: 147 LAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASD 206

Query: 177 TYNFGIMIMETFS-GKKP 193
           T+ FG+ + E F+ G++P
Sbjct: 207 TWMFGVTLWEMFTYGQEP 224

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 59.3 bits (144), Expect = 2e-10
 Identities = 30/127 (23%), Positives = 50/127 (39%), Gaps = 22/127 (17%)

Query: 42  RGGFGSIYKAKIQDG------MEVVVK----GFNLQYGGAFKNLDVECNMMKIIRHQNLI 91
            G FG +Y+ ++         ++V VK      + Q    F     E  ++    HQN++
Sbjct: 81  HGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM---EALIISKFNHQNIV 137

Query: 92  KIISSCSKDDFKALILECMPHGSLGKCL------STSNYILDFFQRLHIMIDVASAVEYL 145
           + I    +   + ++LE M  G L   L       +    L     LH+  D+A   +YL
Sbjct: 138 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 197

Query: 146 ---HFGH 149
              HF H
Sbjct: 198 EENHFIH 204

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 58.9 bits (143), Expect = 2e-10
 Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 11/113 (9%)

Query: 43  GGFGSIYKAKI-----QDGMEVVVKGFNLQYGG--AFKNLDVECNMMKIIRHQNLIKIIS 95
           G FGS+   +        G  V VK   LQ+      ++ + E  ++K ++H N++K   
Sbjct: 52  GNFGSVEMCRYDPLQDNTGEVVAVK--KLQHSTEEHLRDFEREIEILKSLQHDNIVKYKG 109

Query: 96  SCSKDDFKA--LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLH 146
            C     +   LI+E +P+GSL   L      +D  + L     +   +EYL 
Sbjct: 110 VCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 162

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 58.8 bits (143), Expect = 2e-10
 Identities = 49/281 (17%), Positives = 97/281 (34%), Gaps = 90/281 (32%)

Query: 42  RGGFGSIYKAKIQDG------MEVVVK----GFNLQYGGAFKNLDVECNMMKIIRHQNLI 91
              FG +YK  +           V +K             F++   E  +   ++H N++
Sbjct: 19  EDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRH---EAMLRARLQHPNVV 75

Query: 92  KIISSCSKDDFKALILECMPHGSL---------------GKCLSTSNYILDFFQRLHIMI 136
            ++   +KD   ++I     HG L                    T    L+    +H++ 
Sbjct: 76  CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 135

Query: 137 DVASAVEYL---HFGH----------STHLLLK----------EDQSLTQIQTLAT--IS 171
            +A+ +EYL   H  H             L +K                ++   +   I 
Sbjct: 136 QIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIR 195

Query: 172 YMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNS-VM 217
           +MAP            D +++G+++ E FS G +P    + G             N  V+
Sbjct: 196 WMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP----YCG-----------YSNQDVV 240

Query: 218 KVVSANLLSREDEHFMTK-EQCMSFVFNLAMECTVESPNQR 257
           +++        +   +   + C ++V+ L +EC  E P++R
Sbjct: 241 EMI-------RNRQVLPCPDDCPAWVYALMIECWNEFPSRR 274

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 58.5 bits (142), Expect = 3e-10
 Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 11/113 (9%)

Query: 43  GGFGSIYKAKI-----QDGMEVVVKGFNLQYGG--AFKNLDVECNMMKIIRHQNLIKIIS 95
           G FGS+   +        G  V VK   LQ+      ++ + E  ++K ++H N++K   
Sbjct: 21  GNFGSVEMCRYDPLQDNTGEVVAVK--KLQHSTEEHLRDFEREIEILKSLQHDNIVKYKG 78

Query: 96  SCSKDDFKA--LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLH 146
            C     +   LI+E +P+GSL   L      +D  + L     +   +EYL 
Sbjct: 79  VCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 131

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 58.9 bits (143), Expect = 3e-10
 Identities = 38/201 (18%), Positives = 74/201 (36%), Gaps = 50/201 (24%)

Query: 40  ISRGGFGSIYKAKIQ----DGMEVVVK----GFNLQYGGAFKNLDVECNMMKIIRHQNLI 91
           +  G FG +   +++      + V +K    G+  +    F     E ++M    H N+I
Sbjct: 53  VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG---EASIMGQFDHPNII 109

Query: 92  KIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYL------ 145
           ++    +K     ++ E M +GSL   L   +      Q + ++  +AS ++YL      
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV 169

Query: 146 H--------------------FGHSTHLLLKEDQSLTQIQTLATISYMAP---------- 175
           H                    FG    L    + + T       I + +P          
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTS 229

Query: 176 --DTYNFGIMIMETFS-GKKP 193
             D +++GI++ E  S G++P
Sbjct: 230 ASDVWSYGIVLWEVMSYGERP 250

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 59.5 bits (144), Expect = 3e-10
 Identities = 47/262 (17%), Positives = 89/262 (33%), Gaps = 73/262 (27%)

Query: 43  GGFGSIYKAKIQDG----MEVVVK----GFNLQYGGAFKNLDVECNMMKIIRHQNLIKII 94
           G FG +++          M V +K      +      F     E   M+   H +++K+I
Sbjct: 401 GQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ---EALTMRQFDHPHIVKLI 457

Query: 95  SSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYL---HFGH-- 149
              +++    +I+E    G L   L    + LD    +     +++A+ YL    F H  
Sbjct: 458 GVITENPV-WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRD 516

Query: 150 --------STHLLLK-----------EDQSLTQIQTLATISYMAP------------DTY 178
                   S++  +K           +       +    I +MAP            D +
Sbjct: 517 IAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVW 576

Query: 179 NFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNS-VMKVVSANLLSREDEHFMTK- 235
            FG+ + E    G KP    F G           + N+ V+  +       E+   +   
Sbjct: 577 MFGVCMWEILMHGVKP----FQG-----------VKNNDVIGRI-------ENGERLPMP 614

Query: 236 EQCMSFVFNLAMECTVESPNQR 257
             C   +++L  +C    P++R
Sbjct: 615 PNCPPTLYSLMTKCWAYDPSRR 636

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 58.8 bits (143), Expect = 3e-10
 Identities = 44/280 (15%), Positives = 94/280 (33%), Gaps = 84/280 (30%)

Query: 42  RGGFGSIYKA------KIQDGMEVVVK----GFNLQYGGAFKNLDVECNMMKIIRHQNLI 91
           +G FG +Y+       K +    V +K      +++    F N   E ++MK     +++
Sbjct: 35  QGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN---EASVMKEFNCHHVV 91

Query: 92  KIISSCSKDDFKALILECMPHGSL---------GKCLSTSNYILDFFQRLHIMIDVASAV 142
           +++   S+     +I+E M  G L             +         + + +  ++A  +
Sbjct: 92  RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 151

Query: 143 EYL---HFGH----------STHLLLK----------EDQSLTQIQTLAT--ISYMAP-- 175
            YL    F H          +    +K           +    +        + +M+P  
Sbjct: 152 AYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPES 211

Query: 176 ----------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNS-VMKVVSAN 223
                     D ++FG+++ E  +  ++P    + G           L N  V++ V   
Sbjct: 212 LKDGVFTTYSDVWSFGVVLWEIATLAEQP----YQG-----------LSNEQVLRFV--- 253

Query: 224 LLSREDEHFMTK-EQCMSFVFNLAMECTVESPNQRINAKE 262
                +   + K + C   +F L   C   +P  R +  E
Sbjct: 254 ----MEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLE 289

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 59.2 bits (143), Expect = 3e-10
 Identities = 35/199 (17%), Positives = 71/199 (35%), Gaps = 48/199 (24%)

Query: 40  ISRGGFGSIYKAKIQDG---MEVVVKGFNLQYGGAFKNLDV---ECNMMKIIRHQNLIKI 93
           +  G FGS+ +   +     ++V +K   L+ G    + +    E  +M  + +  ++++
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIK--VLKQGTEKADTEEMMREAQIMHQLDNPYIVRL 401

Query: 94  ISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYL------H- 146
           I  C  +    L++E    G L K L      +       ++  V+  ++YL      H 
Sbjct: 402 IGVCQAEALM-LVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHR 460

Query: 147 -------------------FGHSTHLLLKEDQSLTQIQTLATISYMAP------------ 175
                              FG S  L   +     +      + + AP            
Sbjct: 461 NLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRS 520

Query: 176 DTYNFGIMIMETFS-GKKP 193
           D +++G+ + E  S G+KP
Sbjct: 521 DVWSYGVTMWEALSYGQKP 539

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 58.1 bits (141), Expect = 4e-10
 Identities = 55/267 (20%), Positives = 100/267 (37%), Gaps = 73/267 (27%)

Query: 40  ISRGGFGSIYKAKIQDG-----MEVVVK----GFNLQYGGAFKNLDVECNMMKIIRHQNL 90
           I  G FG +YK  ++       + V +K    G+  +    F     E  +M    H N+
Sbjct: 52  IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLG---EAGIMGQFSHHNI 108

Query: 91  IKIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYL---HF 147
           I++    SK     +I E M +G+L K L   +      Q + ++  +A+ ++YL   ++
Sbjct: 109 IRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNY 168

Query: 148 GH----------STHLLLK----------EDQSLTQIQTLAT---ISYMAP--------- 175
            H          +++L+ K          ED       T      I + AP         
Sbjct: 169 VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFT 228

Query: 176 ---DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEH 231
              D ++FGI++ E  + G++P    +          N    + VMK +        D  
Sbjct: 229 SASDVWSFGIVMWEVMTYGERP----YWE------LSN----HEVMKAI-------NDGF 267

Query: 232 FMTK-EQCMSFVFNLAMECTVESPNQR 257
            +     C S ++ L M+C  +   +R
Sbjct: 268 RLPTPMDCPSAIYQLMMQCWQQERARR 294

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 57.6 bits (140), Expect = 5e-10
 Identities = 39/192 (20%), Positives = 75/192 (39%), Gaps = 40/192 (20%)

Query: 40  ISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSK 99
           +  G FG ++        +V VK            L  E N+MK ++HQ L+++ +  ++
Sbjct: 21  LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA-EANLMKQLQHQRLVRLYAVVTQ 79

Query: 100 DDFKALILECMPHGSLGKCL-STSNYILDFFQRLHIMIDVASAVEYL---HFGH------ 149
           +    +I E M +GSL   L + S   L   + L +   +A  + ++   ++ H      
Sbjct: 80  EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAA 138

Query: 150 ----STHLLLK-----------EDQSLTQIQTLATISYMAP------------DTYNFGI 182
               S  L  K           +++   +      I + AP            D ++FGI
Sbjct: 139 NILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGI 198

Query: 183 MIMETFS-GKKP 193
           ++ E  + G+ P
Sbjct: 199 LLTEIVTHGRIP 210

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 57.6 bits (140), Expect = 5e-10
 Identities = 54/259 (20%), Positives = 99/259 (38%), Gaps = 64/259 (24%)

Query: 40  ISRGGFGSIYKAKIQDG-MEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCS 98
           +  G +G +Y+   +   + V VK          + L  E  +MK I+H NL++++  C+
Sbjct: 21  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLK-EAAVMKEIKHPNLVQLLGVCT 79

Query: 99  KDDFKALILECMPHGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYL---HFGH----- 149
           ++    +I E M +G+L   L   N   +     L++   ++SA+EYL   +F H     
Sbjct: 80  REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAA 139

Query: 150 -----STHLLLK-----------EDQSLTQIQTLATISYMAP------------DTYNFG 181
                  + L+K            D           I + AP            D + FG
Sbjct: 140 RNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFG 199

Query: 182 IMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNS-VMKVVSANLLSREDEHFMTK-EQC 238
           +++ E  + G  P    + G           +  S V +++       E ++ M + E C
Sbjct: 200 VLLWEIATYGMSP----YPG-----------IDLSQVYELL-------EKDYRMERPEGC 237

Query: 239 MSFVFNLAMECTVESPNQR 257
              V+ L   C   +P+ R
Sbjct: 238 PEKVYELMRACWQWNPSDR 256

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 57.7 bits (140), Expect = 5e-10
 Identities = 32/138 (23%), Positives = 55/138 (39%), Gaps = 29/138 (21%)

Query: 38  NLISRGGFGSIYKAKIQDG---MEVVVK----GFNLQYGGAFKNLDVECNMMK-IIRHQN 89
           ++I  G FG + KA+I+     M+  +K      +      F     E  ++  +  H N
Sbjct: 31  DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAG---ELEVLCKLGHHPN 87

Query: 90  LIKIISSCSKDDFKALILECMPHGSL---------------GKCLSTSNYILDFFQRLHI 134
           +I ++ +C    +  L +E  PHG+L                   +++   L   Q LH 
Sbjct: 88  IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 147

Query: 135 MIDVASAVEYL---HFGH 149
             DVA  ++YL    F H
Sbjct: 148 AADVARGMDYLSQKQFIH 165

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 57.8 bits (140), Expect = 5e-10
 Identities = 47/224 (20%), Positives = 81/224 (36%), Gaps = 38/224 (16%)

Query: 6   DSLRNSIGDLTSLKSLDLSNNNFSGLFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGF 64
           ++++        LK LD  +       +F     +  G +GS+YKA   + G  V +K  
Sbjct: 3   ETVQLRNPPRRQLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQV 62

Query: 65  NLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNY 124
            ++     + +  E ++M+     +++K   S  K+    +++E    GS+   +   N 
Sbjct: 63  PVE--SDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNK 120

Query: 125 ILDFFQRLHIMIDVASAVEYLHFGHSTH-------LLLKED-----------QSLTQIQT 166
            L   +   I+      +EYLHF    H       +LL  +             LT    
Sbjct: 121 TLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA 180

Query: 167 LA-----TISYMAP-----DTYNF-------GIMIMETFSGKKP 193
                  T  +MAP       YN        GI  +E   GK P
Sbjct: 181 KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPP 224

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 57.7 bits (140), Expect = 6e-10
 Identities = 48/279 (17%), Positives = 94/279 (33%), Gaps = 80/279 (28%)

Query: 43  GGFGSIYKAKIQDG------MEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISS 96
           G FG ++ A+  +       M V VK        A ++   E  ++ +++HQ++++    
Sbjct: 52  GAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGV 111

Query: 97  CSKDDFKALILECMPHGSL--------------GKCLSTSNYILDFFQRLHIMIDVASAV 142
           C++     ++ E M HG L                    +   L   Q L +   VA+ +
Sbjct: 112 CTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGM 171

Query: 143 EYL---HFGH----------STHLLLK----------EDQSLTQIQTLAT--ISYMAP-- 175
            YL   HF H             L++K                ++       I +M P  
Sbjct: 172 VYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPES 231

Query: 176 ----------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANL 224
                     D ++FG+++ E F+ GK+P       +++             +  +    
Sbjct: 232 ILYRKFTTESDVWSFGVVLWEIFTYGKQP-----WYQLSNTE---------AIDCI---- 273

Query: 225 LSREDEHFMTK-EQCMSFVFNLAMECTVESPNQRINAKE 262
                   + +   C   V+ +   C    P QR + K+
Sbjct: 274 ---TQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKD 309

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 57.3 bits (139), Expect = 7e-10
 Identities = 36/198 (18%), Positives = 67/198 (33%), Gaps = 45/198 (22%)

Query: 40  ISRGGFGSIYKAKIQDGME-----VVVKGFNLQYG-GAFKNLDVECNMMKIIRHQNLIKI 93
           +  G FG++YK       E     V +K         A K +  E  +M  + + ++ ++
Sbjct: 23  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82

Query: 94  ISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYL---HFGH- 149
           +  C     + LI + MP G L   +      +     L+  + +A  + YL      H 
Sbjct: 83  LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR 141

Query: 150 ---------STHLLLK------------EDQSLTQIQTLATISYMAP------------D 176
                     T   +K            E++          I +MA             D
Sbjct: 142 DLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSD 201

Query: 177 TYNFGIMIMETFS-GKKP 193
            +++G+ + E  + G KP
Sbjct: 202 VWSYGVTVWELMTFGSKP 219

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 57.3 bits (139), Expect = 8e-10
 Identities = 32/195 (16%), Positives = 71/195 (36%), Gaps = 45/195 (23%)

Query: 43  GGFGSIYKAKIQDGME-----VVVKGFNLQYGG-AFKNLDVECNMMKIIRHQNLIKIISS 96
           G FG+++K       E     V +K    + G  +F+ +      +  + H ++++++  
Sbjct: 24  GVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGL 83

Query: 97  CSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYL---HFGH---- 149
           C     + L+ + +P GSL   +      L     L+  + +A  + YL      H    
Sbjct: 84  CPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLA 142

Query: 150 ------STHLLLK------------EDQSLTQIQTLATISYMAP------------DTYN 179
                  +   ++            +D+ L   +    I +MA             D ++
Sbjct: 143 ARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWS 202

Query: 180 FGIMIMETFS-GKKP 193
           +G+ + E  + G +P
Sbjct: 203 YGVTVWELMTFGAEP 217

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 57.3 bits (139), Expect = 9e-10
 Identities = 38/201 (18%), Positives = 72/201 (35%), Gaps = 50/201 (24%)

Query: 40  ISRGGFGSIYKAKIQDG----MEVVVK----GFNLQYGGAFKNLDVECNMMKIIRHQNLI 91
           I  G  G +   +++      + V +K    G+  +    F +   E ++M    H N+I
Sbjct: 57  IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLS---EASIMGQFDHPNII 113

Query: 92  KIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYL------ 145
           ++    ++     ++ E M +GSL   L T +      Q + ++  V + + YL      
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYV 173

Query: 146 H--------------------FGHSTHLLLKEDQSLTQIQTLATISYMAPDTYN------ 179
           H                    FG S  L    D + T       I + AP+         
Sbjct: 174 HRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSS 233

Query: 180 ------FGIMIMETFS-GKKP 193
                 FG+++ E  + G++P
Sbjct: 234 ASDVWSFGVVMWEVLAYGERP 254

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 56.9 bits (138), Expect = 1e-09
 Identities = 47/263 (17%), Positives = 89/263 (33%), Gaps = 73/263 (27%)

Query: 42  RGGFGSIYKAKIQDG----MEVVVK----GFNLQYGGAFKNLDVECNMMKIIRHQNLIKI 93
            G FG +++          + V +K      +      F     E   M+   H +++K+
Sbjct: 25  EGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ---EALTMRQFDHPHIVKL 81

Query: 94  ISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYL---HFGH- 149
           I   +++    +I+E    G L   L    Y LD    +     +++A+ YL    F H 
Sbjct: 82  IGVITENPVW-IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHR 140

Query: 150 ---------STHLLLK-----------EDQSLTQIQTLATISYMAP------------DT 177
                    S++  +K           +       +    I +MAP            D 
Sbjct: 141 DIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDV 200

Query: 178 YNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNS-VMKVVSANLLSREDEHFMTK 235
           + FG+ + E    G KP    F G           + N+ V+  +       E+   +  
Sbjct: 201 WMFGVCMWEILMHGVKP----FQG-----------VKNNDVIGRI-------ENGERLPM 238

Query: 236 -EQCMSFVFNLAMECTVESPNQR 257
              C   +++L  +C    P++R
Sbjct: 239 PPNCPPTLYSLMTKCWAYDPSRR 261

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 56.1 bits (136), Expect = 1e-09
 Identities = 39/199 (19%), Positives = 73/199 (36%), Gaps = 49/199 (24%)

Query: 40  ISRGGFGSIYKA----KIQDGMEVVVK----GFNLQYGGAFKNLDVECNMMKIIRHQNLI 91
           +  G FG +Y+        + + V VK       L     F +   E  +MK + H +++
Sbjct: 20  LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMS---EAVIMKNLDHPHIV 76

Query: 92  KIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYL---HFG 148
           K+I    ++    +I+E  P+G LG  L  +   L     +   + +  A+ YL   +  
Sbjct: 77  KLIGIIEEEPTW-IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCV 135

Query: 149 H----------STHLLLK-----------EDQSLTQIQTLATISYMAP------------ 175
           H          ++   +K           ++       T   I +M+P            
Sbjct: 136 HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTAS 195

Query: 176 DTYNFGIMIMETFS-GKKP 193
           D + F + + E  S GK+P
Sbjct: 196 DVWMFAVCMWEILSFGKQP 214

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 55.7 bits (135), Expect = 2e-09
 Identities = 42/200 (21%), Positives = 79/200 (39%), Gaps = 50/200 (25%)

Query: 40  ISRGGFGSIYKAKIQDG---MEVVVKGFNLQYGGAFKNLDV----ECNMMKIIRHQNLIK 92
           +  G FG++ K   Q       V VK   L+       L      E N+M+ + +  +++
Sbjct: 25  LGSGNFGTVKKGYYQMKKVVKTVAVK--ILKNEANDPALKDELLAEANVMQQLDNPYIVR 82

Query: 93  IISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYL---HFGH 149
           +I  C  + +  L++E    G L K L  + + +     + ++  V+  ++YL   +F H
Sbjct: 83  MIGICEAESWM-LVMEMAELGPLNKYLQQNRH-VKDKNIIELVHQVSMGMKYLEESNFVH 140

Query: 150 ----------STHLLLK-----------EDQSLTQIQTLAT--ISYMAP----------- 175
                      T    K            D++  + QT     + + AP           
Sbjct: 141 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSK 200

Query: 176 -DTYNFGIMIMETFS-GKKP 193
            D ++FG+++ E FS G+KP
Sbjct: 201 SDVWSFGVLMWEAFSYGQKP 220

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 55.9 bits (135), Expect = 3e-09
 Identities = 21/118 (17%), Positives = 48/118 (40%), Gaps = 5/118 (4%)

Query: 30  GLFLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMK-IIRHQ 88
           G   F   +++  G  G+I    + D  +V VK    +    F   D E  +++    H 
Sbjct: 22  GKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHP 78

Query: 89  NLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLH 146
           N+I+   +     F+ + +E     +L + +   ++     + + ++    S + +LH
Sbjct: 79  NVIRYFCTEKDRQFQYIAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH 135

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 55.8 bits (135), Expect = 3e-09
 Identities = 28/144 (19%), Positives = 48/144 (33%), Gaps = 39/144 (27%)

Query: 42  RGGFGSIYKAKIQDG------MEVVVK----GFNLQYGGAFKNLDVECNMMKIIRHQNLI 91
            G FG +++A+            V VK      +      F+    E  +M    + N++
Sbjct: 57  EGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQR---EAALMAEFDNPNIV 113

Query: 92  KIISSCSKDDFKALILECMPHGSL-----------------------GKCLSTSNYILDF 128
           K++  C+      L+ E M +G L                        +  S     L  
Sbjct: 114 KLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSC 173

Query: 129 FQRLHIMIDVASAVEYL---HFGH 149
            ++L I   VA+ + YL    F H
Sbjct: 174 AEQLCIARQVAAGMAYLSERKFVH 197

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 55.3 bits (134), Expect = 4e-09
 Identities = 27/144 (18%), Positives = 45/144 (31%), Gaps = 39/144 (27%)

Query: 42  RGGFGSIYKAKIQDG------MEVVVK----GFNLQYGGAFKNLDVECNMMKIIRHQNLI 91
            G FG + KA             V VK      +        +   E N++K + H ++I
Sbjct: 33  EGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLS---EFNVLKQVNHPHVI 89

Query: 92  KIISSCSKDDFKALILECMPHGSL-----------------------GKCLSTSNYILDF 128
           K+  +CS+D    LI+E   +GSL                                 L  
Sbjct: 90  KLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149

Query: 129 FQRLHIMIDVASAVEYL---HFGH 149
              +     ++  ++YL      H
Sbjct: 150 GDLISFAWQISQGMQYLAEMKLVH 173

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 55.0 bits (133), Expect = 4e-09
 Identities = 29/130 (22%), Positives = 56/130 (43%), Gaps = 7/130 (5%)

Query: 34  FSESNLISRGGFGSIYKA-KIQDGMEVVVKGFNLQYGGAFKNLDV---ECNMMKIIRHQN 89
           F E   I  G FGS++K  K  DG    +K       G+    +          + +H +
Sbjct: 13  FHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSH 72

Query: 90  LIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFF---QRLHIMIDVASAVEYLH 146
           +++  S+ ++DD   +  E    GSL   +S +  I+ +F   +   +++ V   + Y+H
Sbjct: 73  VVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH 132

Query: 147 FGHSTHLLLK 156
                H+ +K
Sbjct: 133 SMSLVHMDIK 142

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 55.1 bits (132), Expect = 8e-09
 Identities = 29/127 (22%), Positives = 51/127 (40%), Gaps = 10/127 (7%)

Query: 40  ISRGGFGSIYKAK-IQDGMEVVVKGFNLQ-YGGAFKNLDVECNMMKIIRHQNLIKII--- 94
           +  GGFG + +      G +V +K    +      +   +E  +MK + H N++      
Sbjct: 22  LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81

Query: 95  ---SSCSKDDFKALILECMPHGSLGKCLST--SNYILDFFQRLHIMIDVASAVEYLHFGH 149
                 + +D   L +E    G L K L+   +   L       ++ D++SA+ YLH   
Sbjct: 82  DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR 141

Query: 150 STHLLLK 156
             H  LK
Sbjct: 142 IIHRDLK 148

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 54.2 bits (131), Expect = 9e-09
 Identities = 41/208 (19%), Positives = 76/208 (36%), Gaps = 52/208 (25%)

Query: 39  LISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFK---NLDVECNMMKIIRHQNLIKII 94
            I RG F  +Y+A  + DG+ V +K   +      K   +   E +++K + H N+IK  
Sbjct: 39  KIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYY 98

Query: 95  SSCSKDDFKALILECMPHGSLGKCLSTSNYILDFF---QRLHIMIDVASAVEYLH----- 146
           +S  +D+   ++LE    G L + +                   + + SA+E++H     
Sbjct: 99  ASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVM 158

Query: 147 ---------------------FGHSTHLLLKEDQSLTQIQTLATISYMAP-----DTYNF 180
                                 G       K   + + +    T  YM+P     + YNF
Sbjct: 159 HRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV---GTPYYMSPERIHENGYNF 215

Query: 181 -------GIMIMETFSGKKPTIKFFHGE 201
                  G ++ E  + + P    F+G+
Sbjct: 216 KSDIWSLGCLLYEMAALQSP----FYGD 239

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 54.2 bits (131), Expect = 1e-08
 Identities = 45/279 (16%), Positives = 91/279 (32%), Gaps = 86/279 (30%)

Query: 42  RGGFGSIYKA------KIQDGMEVVVK----GFNLQYGGAFKNLDVECNMMKII-RHQNL 90
            G FG + +A      K    ++V VK      +     A  +   E  +M  + +H+N+
Sbjct: 56  AGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS---ELKIMSHLGQHENI 112

Query: 91  IKIISSCSKDDFKALILECMPHGSL-------------GKCLSTSNYILDFFQRLHIMID 137
           + ++ +C+      +I E   +G L                 + +N        LH    
Sbjct: 113 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQ 172

Query: 138 VASAVEYL---HFGH----------STHLLLK------------EDQSLTQIQTLATISY 172
           VA  + +L   +  H          +   + K            +   + +      + +
Sbjct: 173 VAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKW 232

Query: 173 MAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKV 219
           MAP            D +++GI++ E FS G  P    + G +           +   K+
Sbjct: 233 MAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP----YPGILV---------NSKFYKL 279

Query: 220 VSANLLSREDEHFMTK-EQCMSFVFNLAMECTVESPNQR 257
           V       +D + M +       ++++   C    P  R
Sbjct: 280 V-------KDGYQMAQPAFAPKNIYSIMQACWALEPTHR 311

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 53.9 bits (130), Expect = 1e-08
 Identities = 28/139 (20%), Positives = 49/139 (35%), Gaps = 34/139 (24%)

Query: 42  RGGFGSIYKA--------KIQDGMEVVVK----GFNLQYGGAFKNLDVECNMMK-IIRHQ 88
            G FG +  A        K ++ + V VK        +      +   E  MMK I +H+
Sbjct: 91  EGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVS---EMEMMKMIGKHK 147

Query: 89  NLIKIISSCSKDDFKALILECMPHGSL---------------GKCLSTSNYILDFFQRLH 133
           N+I ++ +C++D    +I+E    G+L                         + F   + 
Sbjct: 148 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 207

Query: 134 IMIDVASAVEYL---HFGH 149
               +A  +EYL      H
Sbjct: 208 CTYQLARGMEYLASQKCIH 226

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 53.5 bits (129), Expect = 1e-08
 Identities = 40/239 (16%), Positives = 65/239 (27%), Gaps = 53/239 (22%)

Query: 7   SLRNSIGDLTSLKSLDLSNNNFSGLFLFSESNLISRGGFGSIYKA-KIQDGMEVVVKGFN 65
           S R    +       D S         F   + +  G +G ++K    +DG    VK   
Sbjct: 32  SFRGEASETLQSPGYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSM 91

Query: 66  LQYGGAF--KNLDVECN-MMKIIRHQNLIKIISSCSKDDFKALILE-CMPHGSLGKCLST 121
             + G         E     K+ +H   +++  +  +     L  E C    SL +    
Sbjct: 92  SPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC--GPSLQQHCEA 149

Query: 122 SNYILDFFQRLHIMIDVASAVEYLH--------------------------FGHSTHLLL 155
               L   Q    + D   A+ +LH                          FG    L  
Sbjct: 150 WGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVEL-- 207

Query: 156 KEDQSLTQIQTLA-TISYMAP----DTYNF-------GIMIMETFSGKKPTIKFFHGEM 202
               +    +       YMAP     +Y         G+ I+E     +       GE 
Sbjct: 208 ---GTAGAGEVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMEL---PHGGEG 260

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 53.5 bits (129), Expect = 2e-08
 Identities = 23/121 (19%), Positives = 49/121 (40%), Gaps = 1/121 (0%)

Query: 33  LFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLI 91
           ++     +  G FG +YKAK  + G     K    +     ++  VE  ++    H  ++
Sbjct: 20  VWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIV 79

Query: 92  KIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHST 151
           K++ +   D    +++E  P G++   +   +  L   Q   +   +  A+ +LH     
Sbjct: 80  KLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRII 139

Query: 152 H 152
           H
Sbjct: 140 H 140

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 53.6 bits (129), Expect = 2e-08
 Identities = 25/136 (18%), Positives = 50/136 (36%), Gaps = 13/136 (9%)

Query: 19  KSLDLSNNNFSGLFLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVE 78
           +  ++ N   S   L     ++  G  G++       G  V VK   + +        +E
Sbjct: 2   RIANIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALME 58

Query: 79  CN-MMKIIRHQNLIKIISSCSKDDFKALILE-CMPHGSL------GKCLSTSNYILDFFQ 130
              + +   H N+I+   S + D F  + LE C    +L            +  +   + 
Sbjct: 59  IKLLTESDDHPNVIRYYCSETTDRFLYIALELCN--LNLQDLVESKNVSDENLKLQKEYN 116

Query: 131 RLHIMIDVASAVEYLH 146
            + ++  +AS V +LH
Sbjct: 117 PISLLRQIASGVAHLH 132

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 53.2 bits (128), Expect = 2e-08
 Identities = 27/119 (22%), Positives = 49/119 (41%), Gaps = 11/119 (9%)

Query: 39  LISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIR-HQNLIKIISS 96
           +++ GGF  +Y+A+ +  G E  +K          + +  E   MK +  H N+++  S+
Sbjct: 35  VLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSA 94

Query: 97  CSKD-------DFKALILECMPHGSLGKCL--STSNYILDFFQRLHIMIDVASAVEYLH 146
            S           + L+L  +  G L + L    S   L     L I      AV+++H
Sbjct: 95  ASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH 153

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 53.0 bits (128), Expect = 2e-08
 Identities = 27/138 (19%), Positives = 44/138 (31%), Gaps = 33/138 (23%)

Query: 42  RGGFGSIYKA------KIQDGMEVVVK----GFNLQYGGAFKNLDVECNMMKII-RHQNL 90
           RG FG + +A      K      V VK    G       A  +   E  ++  I  H N+
Sbjct: 37  RGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS---ELKILIHIGHHLNV 93

Query: 91  IKIISSCSKDDFKA-LILECMPHGSL---------------GKCLSTSNYILDFFQRLHI 134
           + ++ +C+K      +I+E    G+L                         L     +  
Sbjct: 94  VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 153

Query: 135 MIDVASAVEYL---HFGH 149
              VA  +E+L      H
Sbjct: 154 SFQVAKGMEFLASRKCIH 171

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 53.0 bits (128), Expect = 2e-08
 Identities = 25/138 (18%), Positives = 44/138 (31%), Gaps = 31/138 (22%)

Query: 43  GGFGSIYKAKI------QDGMEVVVK----GFNLQYGGAFKNLDVECNMMKII-RHQNLI 91
           G FG + +A           M V VK      +L    A  +   E  ++  +  H N++
Sbjct: 34  GAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMS---ELKVLSYLGNHMNIV 90

Query: 92  KIISSCSKDDFKALILECMPHGSL-----------------GKCLSTSNYILDFFQRLHI 134
            ++ +C+      +I E   +G L                    +      LD    L  
Sbjct: 91  NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150

Query: 135 MIDVASAVEYLHFGHSTH 152
              VA  + +L   +  H
Sbjct: 151 SYQVAKGMAFLASKNCIH 168

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 53.1 bits (128), Expect = 2e-08
 Identities = 27/139 (19%), Positives = 47/139 (33%), Gaps = 34/139 (24%)

Query: 42  RGGFGSIYKAKIQD--------GMEVVVK----GFNLQYGGAFKNLDVECNMMK-IIRHQ 88
            G FG +  A+            + V VK        +      +   E  MMK I +H+
Sbjct: 45  EGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVS---EMEMMKMIGKHK 101

Query: 89  NLIKIISSCSKDDFKALILECMPHGSL---------------GKCLSTSNYILDFFQRLH 133
           N+I ++ +C++D    +I+E    G+L                         + F   + 
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161

Query: 134 IMIDVASAVEYL---HFGH 149
               +A  +EYL      H
Sbjct: 162 CTYQLARGMEYLASQKCIH 180

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 52.8 bits (127), Expect = 3e-08
 Identities = 24/114 (21%), Positives = 51/114 (44%), Gaps = 6/114 (5%)

Query: 39  LISRGGFGSIYKAK-IQDGMEVVVKGFN-LQYGGAFKNLDVECNMMKIIRHQNLIKI--I 94
           ++ +G   ++++ +  + G    +K FN + +         E  ++K + H+N++K+  I
Sbjct: 16  ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAI 75

Query: 95  SSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQR--LHIMIDVASAVEYLH 146
              +    K LI+E  P GSL   L   +      +   L ++ DV   + +L 
Sbjct: 76  EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR 129

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 52.7 bits (126), Expect = 3e-08
 Identities = 32/266 (12%), Positives = 67/266 (25%), Gaps = 62/266 (23%)

Query: 34  FSESNLISRGGFGSIYKAK------IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRH 87
               +L+  G F  +Y+A        ++  + V+K         F         +K    
Sbjct: 67  VYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQ 126

Query: 88  QNLIKIISSCSKDDFKALILECMPHGSLG----KCLSTSNYILDFFQRLHIMIDVASAVE 143
              +K  S+    +   L+ E   +G+L        +T   ++     +   + +   +E
Sbjct: 127 HMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIE 186

Query: 144 YLH-------------------------------------FGHSTHL-LLKEDQSLTQIQ 165
            +H                                      G S  + L  +    T   
Sbjct: 187 QVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAK- 245

Query: 166 TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLP 213
              T  +               D +     +     G    +K   GE   +     L  
Sbjct: 246 -CETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKPEGLFRRLPH 304

Query: 214 NSVMKVVSANLLSREDEHFMTKEQCM 239
             +       +L+  D H +     +
Sbjct: 305 LDMWNEFFHVMLNIPDCHHLPSLDLL 330

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 51.9 bits (125), Expect = 4e-08
 Identities = 19/127 (14%), Positives = 46/127 (36%), Gaps = 15/127 (11%)

Query: 34  FSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIK 92
           F E  ++ +G FG + KA+   D     +K            +  E  ++  + HQ +++
Sbjct: 8   FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVR 66

Query: 93  IISSCSKDDFKA-------------LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVA 139
             ++  +                  + +E   +G+L   + + N      +   +   + 
Sbjct: 67  YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQIL 126

Query: 140 SAVEYLH 146
            A+ Y+H
Sbjct: 127 EALSYIH 133

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 52.2 bits (125), Expect = 5e-08
 Identities = 24/114 (21%), Positives = 51/114 (44%), Gaps = 6/114 (5%)

Query: 39  LISRGGFGSIYKAK-IQDGMEVVVKGFN-LQYGGAFKNLDVECNMMKIIRHQNLIKI--I 94
           ++ +G   ++++ +  + G    +K FN + +         E  ++K + H+N++K+  I
Sbjct: 16  ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAI 75

Query: 95  SSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQR--LHIMIDVASAVEYLH 146
              +    K LI+E  P GSL   L   +      +   L ++ DV   + +L 
Sbjct: 76  EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR 129

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 52.0 bits (125), Expect = 6e-08
 Identities = 28/138 (20%), Positives = 46/138 (33%), Gaps = 34/138 (24%)

Query: 43  GGFGSIYKAKIQD--------GMEVVVK----GFNLQYGGAFKNLDVECNMMK-IIRHQN 89
           G FG +  A+             +V VK        +      +   E  MMK I +H+N
Sbjct: 80  GAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS---EMEMMKMIGKHKN 136

Query: 90  LIKIISSCSKDDFKALILECMPHGSL---------------GKCLSTSNYILDFFQRLHI 134
           +I ++ +C++D    +I+E    G+L                         L     +  
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196

Query: 135 MIDVASAVEYL---HFGH 149
              VA  +EYL      H
Sbjct: 197 AYQVARGMEYLASKKCIH 214

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 51.5 bits (124), Expect = 6e-08
 Identities = 42/197 (21%), Positives = 79/197 (40%), Gaps = 38/197 (19%)

Query: 33  LFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLI 91
            ++    I +G  G++Y A  +  G EV ++  NLQ     + +  E  +M+  ++ N++
Sbjct: 21  KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 80

Query: 92  KIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHST 151
             + S    D   +++E +  GSL   +  +   +D  Q   +  +   A+E+LH     
Sbjct: 81  NYLDSYLVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQALEFLHSNQVI 138

Query: 152 H-------LLLKED---------------QSLTQIQTLA-TISYMAP------------D 176
           H       +LL  D                  ++  T+  T  +MAP            D
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVD 198

Query: 177 TYNFGIMIMETFSGKKP 193
            ++ GIM +E   G+ P
Sbjct: 199 IWSLGIMAIEMIEGEPP 215

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 51.6 bits (124), Expect = 6e-08
 Identities = 40/230 (17%), Positives = 79/230 (34%), Gaps = 53/230 (23%)

Query: 16  TSLKSLDLSNNNFSGLFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY--GGAF 72
           +S   L   N  F  +  +     I  G FG     K  +DG + V+K  N+        
Sbjct: 8   SSGVDLGTENLYFQSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKER 67

Query: 73  KNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFF--- 129
           +    E  ++  ++H N+++   S  ++    ++++    G L K ++    +L  F   
Sbjct: 68  EESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVL--FQED 125

Query: 130 QRLHIMIDVASAVEYLH--------------------------FGHSTHLLLKEDQSLTQ 163
           Q L   + +  A++++H                          FG +  L    + +   
Sbjct: 126 QILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARAC 185

Query: 164 IQTLATISYMAPDT-----YNF-------GIMIMETFSGKKPTIKFFHGE 201
           I    T  Y++P+      YN        G ++ E  + K      F   
Sbjct: 186 I---GTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHA----FEAG 228

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 51.5 bits (124), Expect = 7e-08
 Identities = 28/143 (19%), Positives = 45/143 (31%), Gaps = 36/143 (25%)

Query: 43  GGFGSIYKAKIQDG------MEVVVK----GFNLQYGGAFKNLDVECNMMKII-RHQNLI 91
           G FG +  A           ++V VK      +     A  +   E  MM  +  H+N++
Sbjct: 56  GAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMS---ELKMMTQLGSHENIV 112

Query: 92  KIISSCSKDDFKALILECMPHGSL----------------------GKCLSTSNYILDFF 129
            ++ +C+      LI E   +G L                               +L F 
Sbjct: 113 NLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFE 172

Query: 130 QRLHIMIDVASAVEYLHFGHSTH 152
             L     VA  +E+L F    H
Sbjct: 173 DLLCFAYQVAKGMEFLEFKSCVH 195

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 51.4 bits (123), Expect = 8e-08
 Identities = 24/168 (14%), Positives = 55/168 (32%), Gaps = 34/168 (20%)

Query: 38  NLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGG--AFKNLDVECNMMKIIRHQNL--IKI 93
             I  GG   +++   +      +K  NL+        +   E   +  ++  +   I++
Sbjct: 62  KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 121

Query: 94  ISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLH------- 146
                 D +  +++EC  +  L   L      +D ++R     ++  AV  +H       
Sbjct: 122 YDYEITDQYIYMVMEC-GNIDLNSWLK-KKKSIDPWERKSYWKNMLEAVHTIHQHGIVHS 179

Query: 147 ------------------FGHSTHLLLKEDQSLTQIQTLA-TISYMAP 175
                             FG +    ++ D +     +    ++YM P
Sbjct: 180 DLKPANFLIVDGMLKLIDFGIANQ--MQPDTTSVVKDSQVGAVNYMPP 225

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 51.2 bits (123), Expect = 9e-08
 Identities = 43/197 (21%), Positives = 78/197 (39%), Gaps = 38/197 (19%)

Query: 33  LFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLI 91
           L      I  G  G +  A+    G +V VK  +L+     + L  E  +M+  +H N++
Sbjct: 46  LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVV 105

Query: 92  KIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHST 151
           ++  S    +   +++E +  G+L   +  S   L+  Q   +   V  A+ YLH     
Sbjct: 106 EMYKSYLVGEELWVLMEFLQGGALTDIV--SQVRLNEEQIATVCEAVLQALAYLHAQGVI 163

Query: 152 H-------LLLKED---------------QSLTQIQTLA-TISYMAP------------D 176
           H       +LL  D               + + + ++L  T  +MAP            D
Sbjct: 164 HRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVD 223

Query: 177 TYNFGIMIMETFSGKKP 193
            ++ GIM++E   G+ P
Sbjct: 224 IWSLGIMVIEMVDGEPP 240

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 50.8 bits (122), Expect = 1e-07
 Identities = 25/168 (14%), Positives = 56/168 (33%), Gaps = 34/168 (20%)

Query: 38  NLISRGGFGSIYKAKIQDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNL--IKI 93
             I  GG   +++   +      +K  NL+        +   E   +  ++  +   I++
Sbjct: 34  KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 93

Query: 94  ISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLH------- 146
                 D +  +++EC  +  L   L      +D ++R     ++  AV  +H       
Sbjct: 94  YDYEITDQYIYMVMECG-NIDLNSWL-KKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHS 151

Query: 147 ------------------FGHSTHLLLKEDQSLTQIQTLA-TISYMAP 175
                             FG +    ++ D +     +   T++YM P
Sbjct: 152 DLKPANFLIVDGMLKLIDFGIANQ--MQPDTTSVVKDSQVGTVNYMPP 197

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 50.9 bits (122), Expect = 1e-07
 Identities = 25/168 (14%), Positives = 56/168 (33%), Gaps = 34/168 (20%)

Query: 38  NLISRGGFGSIYKAKIQDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNL--IKI 93
             I  GG   +++   +      +K  NL+        +   E   +  ++  +   I++
Sbjct: 15  KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 74

Query: 94  ISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLH------- 146
                 D +  +++EC  +  L   L      +D ++R     ++  AV  +H       
Sbjct: 75  YDYEITDQYIYMVMEC-GNIDLNSWLK-KKKSIDPWERKSYWKNMLEAVHTIHQHGIVHS 132

Query: 147 ------------------FGHSTHLLLKEDQSLTQIQTLA-TISYMAP 175
                             FG +    ++ D +     +   T++YM P
Sbjct: 133 DLKPANFLIVDGMLKLIDFGIANQ--MQPDTTSVVKDSQVGTVNYMPP 178

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 50.6 bits (121), Expect = 2e-07
 Identities = 36/205 (17%), Positives = 67/205 (32%), Gaps = 54/205 (26%)

Query: 39  LISRGGFGSIYKAK--IQDGMEVVVKGFNLQYGG------AFKNLDVECNMMKIIRHQNL 90
            I+ GG G IY A     +G  VV+KG  L + G             E   +  + H ++
Sbjct: 87  CIAHGGLGWIYLALDRNVNGRPVVLKG--LVHSGDAEAQAMAMA---ERQFLAEVVHPSI 141

Query: 91  IKIISSCSKDDFKA-----LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYL 145
           ++I +     D        +++E +   SL +        L   + +  ++++  A+ YL
Sbjct: 142 VQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQK---LPVAEAIAYLLEILPALSYL 198

Query: 146 HFGHSTH-------LLLKEDQ----------SLTQIQT-LATISYMAP-----------D 176
           H     +       ++L E+Q           +        T  + AP           D
Sbjct: 199 HSIGLVYNDLKPENIMLTEEQLKLIDLGAVSRINSFGYLYGTPGFQAPEIVRTGPTVATD 258

Query: 177 TYNFGIMIMETFSGKKPTIKFFHGE 201
            Y  G  +              +G 
Sbjct: 259 IYTVGRTLAALTLDLPT----RNGR 279

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 49.6 bits (119), Expect = 3e-07
 Identities = 21/116 (18%), Positives = 43/116 (37%), Gaps = 8/116 (6%)

Query: 39  LISRGGFGSIYKAK-IQDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIIS 95
            I  G +G   K +   DG  +V K  +         + L  E N+++ ++H N+++   
Sbjct: 13  TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 72

Query: 96  SCSKDDFKAL--ILECMPHGSLGKCLSTSNYILDFF---QRLHIMIDVASAVEYLH 146
                    L  ++E    G L   ++       +      L +M  +  A++  H
Sbjct: 73  RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH 128

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 48.8 bits (117), Expect = 4e-07
 Identities = 42/216 (19%), Positives = 68/216 (31%), Gaps = 64/216 (29%)

Query: 34  FSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIK 92
           F E  LI  GGFG ++KAK   DG   V+K          +  + E   +  + H N++ 
Sbjct: 13  FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYN----NEKAEREVKALAKLDHVNIVH 68

Query: 93  IISSCSKDDFKA----------------LILECMPHGSLGKCLSTSN-YILDFFQRLHIM 135
                   D+                  + +E    G+L + +       LD    L + 
Sbjct: 69  YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELF 128

Query: 136 IDVASAVEYLH--------------------------FGHSTHLLLKEDQSLTQIQTLAT 169
             +   V+Y+H                          FG  T   LK D   T  ++  T
Sbjct: 129 EQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVT--SLKNDGKRT--RSKGT 184

Query: 170 ISYMAP-----DTYNF-------GIMIMETFSGKKP 193
           + YM+P       Y         G+++ E       
Sbjct: 185 LRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDT 220

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 48.9 bits (117), Expect = 5e-07
 Identities = 24/129 (18%), Positives = 51/129 (39%), Gaps = 16/129 (12%)

Query: 34  FSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFK-NLDVECNMMKIIRHQNLI 91
           F     + RGGFG +++AK   D     +K   L      +  +  E   +  + H  ++
Sbjct: 7   FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 66

Query: 92  KIISSCSKDDFKA------------LILECMPHGSLGKCLSTSNYILDFFQR--LHIMID 137
           +  ++  + +               + ++     +L   ++    I +  +   LHI + 
Sbjct: 67  RYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQ 126

Query: 138 VASAVEYLH 146
           +A AVE+LH
Sbjct: 127 IAEAVEFLH 135

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 48.6 bits (116), Expect = 8e-07
 Identities = 39/199 (19%), Positives = 71/199 (35%), Gaps = 39/199 (19%)

Query: 33  LFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGA---FKNLDVECNMMKIIRHQ 88
           LFS+   I  G FG++Y A+ +++   V +K  +     +   ++++  E   ++ +RH 
Sbjct: 55  LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHP 114

Query: 89  NLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFG 148
           N I+      ++    L++E    GS    L      L   +   +       + YLH  
Sbjct: 115 NTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH 173

Query: 149 HSTH-------LLLKED-----------QSLTQIQTLA-TISYMAP--------DTYNF- 180
           +  H       +LL E              +    +   T  +MAP          Y+  
Sbjct: 174 NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGK 233

Query: 181 ------GIMIMETFSGKKP 193
                 GI  +E    K P
Sbjct: 234 VDVWSLGITCIELAERKPP 252

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 47.6 bits (113), Expect = 2e-06
 Identities = 30/204 (14%), Positives = 65/204 (31%), Gaps = 50/204 (24%)

Query: 40  ISRG--GFGSIYKAK-IQDGMEVVVKGFNL--QYGGAFKNLDVECNMMKIIRHQNLIKII 94
           I +G     ++  A+    G  V V+  NL          L  E ++ K+  H N++   
Sbjct: 33  IGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYR 92

Query: 95  SSCSKDDFKALILECMPHGSLGKCL-STSNYILDFFQRLHIMIDVASAVEYLH------- 146
           ++   D+   ++   M +GS    + +     ++     +I+  V  A++Y+H       
Sbjct: 93  ATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHR 152

Query: 147 -------------------FGHSTHLLLKEDQSLTQIQTLA----TISYMAP-------- 175
                                 +  ++    +              + +++P        
Sbjct: 153 SVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQ 212

Query: 176 ------DTYNFGIMIMETFSGKKP 193
                 D Y+ GI   E  +G  P
Sbjct: 213 GYDAKSDIYSVGITACELANGHVP 236

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 46.6 bits (111), Expect = 3e-06
 Identities = 29/165 (17%), Positives = 53/165 (32%), Gaps = 29/165 (17%)

Query: 6   DSLRNSIGDLTSLKSLDLSNNNFSGLFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGF 64
           D     I      + +++   +    +   E   +  G FG +++      G   V K  
Sbjct: 27  DKFYEDIWKKYVPQPVEVKQGSVYDYYDILE--ELGSGAFGVVHRCVEKATGRVFVAKFI 84

Query: 65  NLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNY 124
           N  Y      +  E ++M  + H  LI +  +        LILE +  G L         
Sbjct: 85  NTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGEL--------- 135

Query: 125 ILDFFQRL-------------HIMIDVASAVEYLHFGHSTHLLLK 156
               F R+             + M      ++++H     HL +K
Sbjct: 136 ----FDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIK 176

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 47.1 bits (112), Expect = 3e-06
 Identities = 26/153 (16%), Positives = 60/153 (39%), Gaps = 3/153 (1%)

Query: 5   QDSLRNSIGDLTSLKSLDLSNNNFSGLFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKG 63
            D+    I      + +++ +++    +   E   +  G FG +++      G     K 
Sbjct: 132 YDNYVFDIWKQYYPQPVEIKHDHVLDHYDIHE--ELGTGAFGVVHRVTERATGNNFAAKF 189

Query: 64  FNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCLSTSN 123
               +    + +  E   M ++RH  L+ +  +   D+   +I E M  G L + ++  +
Sbjct: 190 VMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEH 249

Query: 124 YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLK 156
             +   + +  M  V   + ++H  +  HL LK
Sbjct: 250 NKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLK 282

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 46.2 bits (110), Expect = 4e-06
 Identities = 41/204 (20%), Positives = 64/204 (31%), Gaps = 50/204 (24%)

Query: 40  ISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGA-FKNLDVECNMMKIIRHQNLIKIISSC 97
           I  G    +  A       +V +K  NL+        L  E   M    H N++   +S 
Sbjct: 23  IGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSF 82

Query: 98  SKDDFKALILECMPHGSL-------GKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHS 150
              D   L+++ +  GS+              + +LD      I+ +V   +EYLH    
Sbjct: 83  VVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ 142

Query: 151 TH-------LLLKED-----------QSLTQIQTLATIS----------YMAP------D 176
            H       +LL ED             L     +              +MAP       
Sbjct: 143 IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVR 202

Query: 177 TYN-------FGIMIMETFSGKKP 193
            Y+       FGI  +E  +G  P
Sbjct: 203 GYDFKADIWSFGITAIELATGAAP 226

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 44.9 bits (107), Expect = 1e-05
 Identities = 23/118 (19%), Positives = 43/118 (36%), Gaps = 26/118 (22%)

Query: 42  RGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKD 100
            G F  ++  K    G    +K           +L+ E  ++K I+H+N++ +       
Sbjct: 19  SGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYEST 78

Query: 101 DFKALILECMPHGSLGKCLSTSNYILDFFQRL------------HIMIDVASAVEYLH 146
               L+++ +  G L             F R+             ++  V SAV+YLH
Sbjct: 79  THYYLVMQLVSGGEL-------------FDRILERGVYTEKDASLVIQQVLSAVKYLH 123

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 44.6 bits (106), Expect = 1e-05
 Identities = 44/216 (20%), Positives = 75/216 (34%), Gaps = 41/216 (18%)

Query: 15  LTSLKSLDLSNNNFSGLFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNL-QYGGAF 72
            + L  +     +   LF   E   I +G FG ++K    +    V +K  +L +     
Sbjct: 7   QSGLPGMQNLKADPEELFTKLE--KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEI 64

Query: 73  KNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRL 132
           +++  E  ++       + K   S  KD    +I+E +  GS    L      LD  Q  
Sbjct: 65  EDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG--PLDETQIA 122

Query: 133 HIMIDVASAVEYLHFGHSTH-------LLLKED---------------QSLTQIQTLA-T 169
            I+ ++   ++YLH     H       +LL E                 +  +  T   T
Sbjct: 123 TILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGT 182

Query: 170 ISYMAP-----DTYNF-------GIMIMETFSGKKP 193
             +MAP       Y+        GI  +E   G+ P
Sbjct: 183 PFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 218

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 44.7 bits (106), Expect = 1e-05
 Identities = 25/137 (18%), Positives = 59/137 (43%), Gaps = 1/137 (0%)

Query: 21  LDLSNNNFSGLFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVEC 79
           +       +  +  S++ ++  G FG ++K +    G+++  K    +     + +  E 
Sbjct: 78  VTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEI 137

Query: 80  NMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVA 139
           ++M  + H NLI++  +    +   L++E +  G L   +   +Y L     +  M  + 
Sbjct: 138 SVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQIC 197

Query: 140 SAVEYLHFGHSTHLLLK 156
             + ++H  +  HL LK
Sbjct: 198 EGIRHMHQMYILHLDLK 214

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 44.1 bits (105), Expect = 2e-05
 Identities = 51/273 (18%), Positives = 96/273 (35%), Gaps = 72/273 (26%)

Query: 39  LISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGA------FKNLDVECNMMKIIRHQNLI 91
            +  GG  ++Y A+     ++V +K   +           F+    E +    + HQN++
Sbjct: 18  KLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFER---EVHNSSQLSHQNIV 74

Query: 92  KIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHST 151
            +I    +DD   L++E +   +L      S+  L     ++    +   +++ H     
Sbjct: 75  SMIDVDEEDDCYYLVMEYIEGPTL-SEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIV 133

Query: 152 H--------LLLKE---------------DQSLTQIQT-LATISYMAP------------ 175
           H        L+                  + SLTQ    L T+ Y +P            
Sbjct: 134 HRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECT 193

Query: 176 DTYNFGIMIMETFSGKKPTIKFFHGE----MTLKHWVNDLLPNSVMKVVSANLLSREDEH 231
           D Y+ GI++ E   G+ P    F+GE    + +KH + D +PN    V     + +    
Sbjct: 194 DIYSIGIVLYEMLVGEPP----FNGETAVSIAIKH-IQDSVPNVTTDVRKD--IPQSLS- 245

Query: 232 FMTKEQCMSFVFNLAMECTVESPNQR-INAKEM 263
                       N+ +  T +    R    +EM
Sbjct: 246 ------------NVILRATEKDKANRYKTIQEM 266

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.5 bits (104), Expect = 2e-05
 Identities = 37/245 (15%), Positives = 72/245 (29%), Gaps = 79/245 (32%)

Query: 1   YNRLQDSLRNSIGDLTSLKSLDLSNNNFSGLFLFSESNLISRGGFGSIYKAKIQDGMEVV 60
            ++L   + +S   L  L+  +     F  L +F  S  I       I+   I+  + VV
Sbjct: 352 CDKLTTIIESS---LNVLEPAEYRKM-FDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVV 407

Query: 61  VKGFNLQYGGAFKN------------LDVECNMM-------KIIRHQNLIKIISSCSKD- 100
           V     +Y    K             L+++  +         I+ H N+ K  +  S D 
Sbjct: 408 VNKL-HKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPK--TFDSDDL 464

Query: 101 ----------------------------------DF----KALILECMPHGSLGKCLST- 121
                                             DF    + +  +     + G  L+T 
Sbjct: 465 IPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTL 524

Query: 122 ------SNYILDFFQRLHIMIDVASAVEYLHF--GHSTHLLLKEDQSLTQIQTLATISYM 173
                   YI D   +   +++       L F      +L+  +   L +I  +A    +
Sbjct: 525 QQLKFYKPYICDNDPKYERLVN-----AILDFLPKIEENLICSKYTDLLRIALMAEDEAI 579

Query: 174 APDTY 178
             + +
Sbjct: 580 FEEAH 584

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 42.8 bits (101), Expect = 6e-05
 Identities = 27/136 (19%), Positives = 47/136 (34%), Gaps = 35/136 (25%)

Query: 42  RGGFGSIYKAK-IQDGMEVVVKGFN---LQYGGAFKNLDV-----ECNMMKIIRHQNLIK 92
            G  G +  A   +   +V ++  +      G A +         E  ++K + H  +IK
Sbjct: 145 SGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIK 204

Query: 93  IISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRL------------HIMIDVAS 140
           I +    +D+  ++LE M  G L             F ++                 +  
Sbjct: 205 IKNFFDAEDY-YIVLELMEGGEL-------------FDKVVGNKRLKEATCKLYFYQMLL 250

Query: 141 AVEYLHFGHSTHLLLK 156
           AV+YLH     H  LK
Sbjct: 251 AVQYLHENGIIHRDLK 266

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 42.1 bits (100), Expect = 7e-05
 Identities = 28/135 (20%), Positives = 60/135 (44%), Gaps = 13/135 (9%)

Query: 39  LISRGGFGSIYKAK-IQDGMEVVVKGFN---LQYGGAFKNLDVECNMMKIIRHQNLIKII 94
           L+ +G F  +Y+A+ I  G+EV +K  +   +   G  + +  E  +   ++H +++++ 
Sbjct: 18  LLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELY 77

Query: 95  SSCSKDDFKA-LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTH- 152
           +   +D     L+LE   +G + + L          +  H M  + + + YLH     H 
Sbjct: 78  N-YFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHR 136

Query: 153 ------LLLKEDQSL 161
                 LLL  + ++
Sbjct: 137 DLTLSNLLLTRNMNI 151

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 42.2 bits (100), Expect = 7e-05
 Identities = 33/179 (18%), Positives = 59/179 (32%), Gaps = 58/179 (32%)

Query: 42  RGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECN----------MMKIIRHQNL 90
           RG    + +        E  VK  ++  GG+F   +V+            + K+  H N+
Sbjct: 27  RGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNI 86

Query: 91  IKIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRL------------HIMIDV 138
           I++  +   + F  L+ + M  G L             F  L             IM  +
Sbjct: 87  IQLKDTYETNTFFFLVFDLMKKGEL-------------FDYLTEKVTLSEKETRKIMRAL 133

Query: 139 ASAVEYLHFGHSTH-------LLLKEDQSL-----------TQIQTLATI----SYMAP 175
              +  LH  +  H       +LL +D ++              + L  +    SY+AP
Sbjct: 134 LEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAP 192

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 42.2 bits (100), Expect = 8e-05
 Identities = 40/195 (20%), Positives = 70/195 (35%), Gaps = 50/195 (25%)

Query: 42  RGGFGSIYKAK-IQDGMEVVVKGFN---LQYGGAFKNLDVECNMMKIIRHQNLIKIISSC 97
           +G FG++Y A+  Q    + +K      L+  G    L  E  +   +RH N++++    
Sbjct: 19  KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 78

Query: 98  SKDDFKALILECMPHGSLGKCLSTSNYILDFFQRL------HIMIDVASAVEYLHFGHST 151
                  LILE  P G++ + L           +         + ++A+A+ Y H     
Sbjct: 79  HDATRVYLILEYAPLGTVYRELQKL-------SKFDEQRTATYITELANALSYCHSKRVI 131

Query: 152 H-------LLLKEDQSL-------------TQIQTL-ATISYMAP------------DTY 178
           H       LLL     L             ++   L  T+ Y+ P            D +
Sbjct: 132 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLW 191

Query: 179 NFGIMIMETFSGKKP 193
           + G++  E   GK P
Sbjct: 192 SLGVLCYEFLVGKPP 206

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 42.4 bits (100), Expect = 1e-04
 Identities = 30/152 (19%), Positives = 53/152 (34%), Gaps = 31/152 (20%)

Query: 21  LDLSNNNFSGLFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFN---LQYGGAFKNLD 76
           +  S   FS  +      ++ +G FG +   K    G E  VK  +   ++     ++L 
Sbjct: 17  VQHSTAIFSDRYKGQR--VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL 74

Query: 77  VECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRL---- 132
            E  ++K + H N++K+        +  L+ E    G L             F  +    
Sbjct: 75  REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL-------------FDEIISRK 121

Query: 133 --------HIMIDVASAVEYLHFGHSTHLLLK 156
                    I+  V S + Y+H     H  LK
Sbjct: 122 RFSEVDAARIIRQVLSGITYMHKNKIVHRDLK 153

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 42.2 bits (99), Expect = 1e-04
 Identities = 20/88 (22%), Positives = 35/88 (39%), Gaps = 15/88 (17%)

Query: 40  ISRGGFGSIYKAKI------QDGMEVVVK----GFNLQYGGAFKNLDVECNMMKII-RHQ 88
           + RG FG + +A             V VK    G       A  +   E  ++  I  H 
Sbjct: 30  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS---ELKILIHIGHHL 86

Query: 89  NLIKIISSCSKDDFKA-LILECMPHGSL 115
           N++ ++ +C+K      +I+E    G+L
Sbjct: 87  NVVNLLGACTKPGGPLMVIVEFCKFGNL 114

>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636

 Score = 42.0 bits (99), Expect = 1e-04
 Identities = 9/42 (21%), Positives = 15/42 (35%)

Query: 1   YNRLQDSLRNSIGDLTSLKSLDLSNNNFSGLFLFSESNLISR 42
                  + ++IG LT L+ L L ++             IS 
Sbjct: 90  GFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISA 131

>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636

 Score = 40.4 bits (95), Expect = 4e-04
 Identities = 7/31 (22%), Positives = 11/31 (35%)

Query: 1   YNRLQDSLRNSIGDLTSLKSLDLSNNNFSGL 31
            NR        I    SL  L + +N+   +
Sbjct: 551 GNRTLREWPEGITLCPSLTQLQIGSNDIRKV 581

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 41.5 bits (98), Expect = 1e-04
 Identities = 25/121 (20%), Positives = 45/121 (37%), Gaps = 44/121 (36%)

Query: 132 LHIMIDVASAVEYLHFGHSTH-------LLLKED----------------QSLTQIQT-L 167
           + I+  + SA++  H   +TH       +L+  D                + LTQ+   +
Sbjct: 137 VAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTV 196

Query: 168 ATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGE---MTLKHWVNDLL 212
            T+ YMAP            D Y    ++ E  +G  P    + G+   +   H +N  +
Sbjct: 197 GTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPP----YQGDQLSVMGAH-INQAI 251

Query: 213 P 213
           P
Sbjct: 252 P 252

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 41.6 bits (98), Expect = 1e-04
 Identities = 27/151 (17%), Positives = 51/151 (33%), Gaps = 30/151 (19%)

Query: 21  LDLSNNNFSGLFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDV-- 77
           +     + S ++   +   +  G +G +   +     +E  +K           N  +  
Sbjct: 28  ITSKKGHLSEMYQRVK--KLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLE 85

Query: 78  ECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRL----- 132
           E  ++K++ H N++K+           L++EC   G L             F  +     
Sbjct: 86  EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGEL-------------FDEIIHRMK 132

Query: 133 -------HIMIDVASAVEYLHFGHSTHLLLK 156
                   I+  V S V YLH  +  H  LK
Sbjct: 133 FNEVDAAVIIKQVLSGVTYLHKHNIVHRDLK 163

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 41.5 bits (98), Expect = 1e-04
 Identities = 35/181 (19%), Positives = 57/181 (31%), Gaps = 60/181 (33%)

Query: 42  RGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIR-HQNLIKIISSCSK 99
            G    +     +    E  VK    Q G     +  E  M+   + H+N++++I    +
Sbjct: 23  EGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEE 82

Query: 100 DDFKALILECMPHGSLGKCLSTSNYILDFFQRLH------------IMIDVASAVEYLH- 146
           +D   L+ E M  GS+                +H            ++ DVASA+++LH 
Sbjct: 83  EDRFYLVFEKMRGGSI-------------LSHIHKRRHFNELEASVVVQDVASALDFLHN 129

Query: 147 ----------------------------FGHSTHLLLKEDQSLTQIQTLATI----SYMA 174
                                       F   + + L  D S      L T      YMA
Sbjct: 130 KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMA 189

Query: 175 P 175
           P
Sbjct: 190 P 190

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 41.1 bits (97), Expect = 2e-04
 Identities = 18/118 (15%), Positives = 41/118 (34%), Gaps = 17/118 (14%)

Query: 39  LISRGGFGSIYKAK-IQDGMEVVVKGFN---LQYGGAFKNLDVECNMMKIIRHQNLIKII 94
            + +GGF   ++            K      L      + + +E ++ + + HQ+++   
Sbjct: 48  FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107

Query: 95  SSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRL------HIMIDVASAVEYLH 146
                +DF  ++LE     SL +            + L      + +  +    +YLH
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLELHKRR-------KALTEPEARYYLRQIVLGCQYLH 158

>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768

 Score = 41.0 bits (97), Expect = 3e-04
 Identities = 15/30 (50%), Positives = 18/30 (60%)

Query: 1   YNRLQDSLRNSIGDLTSLKSLDLSNNNFSG 30
            NRL   +   IG L +L  L LSNN+FSG
Sbjct: 499 NNRLTGEIPKWIGRLENLAILKLSNNSFSG 528

>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768

 Score = 40.3 bits (95), Expect = 4e-04
 Identities = 11/29 (37%), Positives = 16/29 (55%)

Query: 2   NRLQDSLRNSIGDLTSLKSLDLSNNNFSG 30
           N    ++   +GD  SL  LDL+ N F+G
Sbjct: 524 NSFSGNIPAELGDCRSLIWLDLNTNLFNG 552

>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768

 Score = 40.3 bits (95), Expect = 5e-04
 Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%)

Query: 1   YNRLQDSLRNSIGDLTSLKSLDLSNNNFSGLFLFSESNLIS 41
            N+L      +I   T LK L++S+N F G        L S
Sbjct: 232 GNKLSGDFSRAISTCTELKLLNISSNQFVG--PIPPLPLKS 270

>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768

 Score = 39.9 bits (94), Expect = 5e-04
 Identities = 9/29 (31%), Positives = 14/29 (48%)

Query: 2   NRLQDSLRNSIGDLTSLKSLDLSNNNFSG 30
           N     +  ++ + + L SL LS N  SG
Sbjct: 404 NGFTGKIPPTLSNCSELVSLHLSFNYLSG 432

>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768

 Score = 39.9 bits (94), Expect = 6e-04
 Identities = 12/30 (40%), Positives = 18/30 (60%)

Query: 1   YNRLQDSLRNSIGDLTSLKSLDLSNNNFSG 30
           +N +  S+ + +GDL  L  LDLS+N   G
Sbjct: 665 HNDISGSIPDEVGDLRGLNILDLSSNKLDG 694

>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768

 Score = 39.5 bits (93), Expect = 7e-04
 Identities = 12/30 (40%), Positives = 17/30 (56%)

Query: 1   YNRLQDSLRNSIGDLTSLKSLDLSNNNFSG 30
            N    ++    G  + L+SL LS+NNFSG
Sbjct: 303 GNHFYGAVPPFFGSCSLLESLALSSNNFSG 332

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 40.4 bits (95), Expect = 3e-04
 Identities = 21/116 (18%), Positives = 52/116 (44%), Gaps = 9/116 (7%)

Query: 40  ISRGGFGSIYKAK-IQDGMEVVVK-----GFNLQYGGAFKNLDVECNMMKIIRHQNLIKI 93
           I +G F  + +    + G +  VK      F    G + ++L  E ++  +++H +++++
Sbjct: 32  IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91

Query: 94  ISSCSKDDFKALILECMPHGSL-GKCLSTSNYILDFFQRL--HIMIDVASAVEYLH 146
           + + S D    ++ E M    L  + +  ++    + + +  H M  +  A+ Y H
Sbjct: 92  LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH 147

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 40.2 bits (95), Expect = 3e-04
 Identities = 27/174 (15%), Positives = 59/174 (33%), Gaps = 53/174 (30%)

Query: 42  RGGFGSIYKA-KIQDGMEVVVKGFNLQ--YGGAFKNLDVECNMMKIIRHQNLIKIISSCS 98
           +G F  + +      G+E   K  N +      F+ L+ E  + + ++H N++++  S  
Sbjct: 16  KGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ 75

Query: 99  KDDFKALILECMPHGSLGKCLSTSNYILDFFQRL------------HIMIDVASAVEYLH 146
           ++ F  L+ + +  G L             F+ +            H +  +  ++ Y H
Sbjct: 76  EESFHYLVFDLVTGGEL-------------FEDIVAREFYSEADASHCIQQILESIAYCH 122

Query: 147 FGHSTH-------LLL--KEDQSLTQI------------QTLATI----SYMAP 175
                H       LLL  K   +  ++            +          Y++P
Sbjct: 123 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSP 176

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 40.3 bits (95), Expect = 3e-04
 Identities = 18/112 (16%), Positives = 42/112 (37%), Gaps = 5/112 (4%)

Query: 39  LISRGGFGSIYKAK-IQDGMEVVVKGFN---LQYGGAFKNLDVECNMMKIIRHQNLIKII 94
            + +GGF   ++            K      L      + + +E ++ + + HQ+++   
Sbjct: 22  FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81

Query: 95  SSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLH 146
                +DF  ++LE     SL +       + +   R + +  +    +YLH
Sbjct: 82  GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEAR-YYLRQIVLGCQYLH 132

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 40.4 bits (95), Expect = 3e-04
 Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 10/94 (10%)

Query: 24  SNNNFSGLFLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMK 83
                     ++   +I  G FG +++AK+ +  EV +K         FKN   E  +M+
Sbjct: 32  GKTGEQREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQD--KRFKNR--ELQIMR 87

Query: 84  IIRHQNLIK----IISSCSKDDFKA--LILECMP 111
           I++H N++       S+  K D     L+LE +P
Sbjct: 88  IVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVP 121

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 40.4 bits (95), Expect = 3e-04
 Identities = 35/180 (19%), Positives = 62/180 (34%), Gaps = 60/180 (33%)

Query: 42  RGGFGSIYKAK-IQDGMEVVVKGFN---LQYGGAFKNLDV-----ECNMMKIIRHQNLIK 92
            G  G +  A   +   +V +K  +      G A +         E  ++K + H  +IK
Sbjct: 20  SGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIK 79

Query: 93  IISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRL------------HIMIDVAS 140
           I +    +D+  ++LE M  G L             F ++                 +  
Sbjct: 80  IKNFFDAEDY-YIVLELMEGGEL-------------FDKVVGNKRLKEATCKLYFYQMLL 125

Query: 141 AVEYLHFGHSTH-------LLL--KEDQSLTQI------------QTLATI----SYMAP 175
           AV+YLH     H       +LL  +E+  L +I              + T+    +Y+AP
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 185

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 40.3 bits (95), Expect = 3e-04
 Identities = 21/129 (16%), Positives = 48/129 (37%), Gaps = 28/129 (21%)

Query: 42  RGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKD 100
           RG FG +++          + K   ++ G     +  E +++ I RH+N++ +  S    
Sbjct: 15  RGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFESM 73

Query: 101 DFKALILECMPHGSLGKCLSTSNYILDFFQRL-------------HIMIDVASAVEYLHF 147
           +   +I E +    +             F+R+               +  V  A+++LH 
Sbjct: 74  EELVMIFEFISGLDI-------------FERINTSAFELNEREIVSYVHQVCEALQFLHS 120

Query: 148 GHSTHLLLK 156
            +  H  ++
Sbjct: 121 HNIGHFDIR 129

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 40.5 bits (95), Expect = 4e-04
 Identities = 32/178 (17%), Positives = 55/178 (30%), Gaps = 57/178 (32%)

Query: 42  RGGFGSIYKAK-IQDGMEVVVK--------GFNLQYGGAFKNLDVECN-MMKIIRHQNLI 91
           RG    + +      G E  VK            Q     +    E + + ++  H ++I
Sbjct: 104 RGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHII 163

Query: 92  KIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRL------------HIMIDVA 139
            +I S     F  L+ + M  G L             F  L             IM  + 
Sbjct: 164 TLIDSYESSSFMFLVFDLMRKGEL-------------FDYLTEKVALSEKETRSIMRSLL 210

Query: 140 SAVEYLHFGHSTH-------LLLKEDQSL--------TQI---QTLATI----SYMAP 175
            AV +LH  +  H       +LL ++  +          +   + L  +     Y+AP
Sbjct: 211 EAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAP 268

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 40.1 bits (94), Expect = 4e-04
 Identities = 16/129 (12%), Positives = 38/129 (29%), Gaps = 25/129 (19%)

Query: 42  RGGFGSIYKAKIQDGMEVVVK-----------------GFNLQYGGAFKNLDVECNMMKI 84
           +G F  I   + +D     +K                    +     + +   E  ++  
Sbjct: 41  QGKFNKIILCE-KDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITD 99

Query: 85  IRHQNLIKIISSCSKDDFKALILECMPHGSL-------GKCLSTSNYILDFFQRLHIMID 137
           I+++  +      +  D   +I E M + S+                 +       I+  
Sbjct: 100 IKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKS 159

Query: 138 VASAVEYLH 146
           V ++  Y+H
Sbjct: 160 VLNSFSYIH 168

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 40.4 bits (94), Expect = 4e-04
 Identities = 30/293 (10%), Positives = 64/293 (21%), Gaps = 81/293 (27%)

Query: 39  LISRGGFGSIYKAK-IQDGMEVVVKGFN---LQYGGAFKNLDVECNMMKIIRHQNLIKII 94
            +  G    ++  + ++   +  +K F           + L         +  ++  +  
Sbjct: 69  PLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEAR 128

Query: 95  SSC----------------------SKDDFKAL---ILECMPHGSLGKCLSTSNYI---- 125
                                     +DD+      +L       L    ST +++    
Sbjct: 129 DRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFR 188

Query: 126 --LDFFQRLHIMIDVASAVEYLHFGHSTH-------LLLKEDQSL------------TQI 164
                     +   +      L      H       L +  D  L            T+ 
Sbjct: 189 GDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRG 248

Query: 165 QTLATISYMAP---------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVN 209
              +     AP               + +  G+ I   +    P   F          + 
Sbjct: 249 PASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLP---F---------GLV 296

Query: 210 DLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKE 262
                   K  S  +   +   F +      FV  L          +R+   E
Sbjct: 297 TPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLE 349

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 40.0 bits (94), Expect = 4e-04
 Identities = 26/134 (19%), Positives = 43/134 (32%), Gaps = 32/134 (23%)

Query: 42  RGGFGSIYKAK-IQDGMEVVVK------GFNLQYGGAFKNLDVECNMMKIIRHQNLIKII 94
            G F  + K +    G+E   K          + G   + ++ E ++++ + H N+I + 
Sbjct: 22  SGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLH 81

Query: 95  SSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRL------------HIMIDVASAV 142
                     LILE +  G L             F  L              +  +   V
Sbjct: 82  DVYENRTDVVLILELVSGGEL-------------FDFLAQKESLSEEEATSFIKQILDGV 128

Query: 143 EYLHFGHSTHLLLK 156
            YLH     H  LK
Sbjct: 129 NYLHTKKIAHFDLK 142

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 39.9 bits (94), Expect = 4e-04
 Identities = 26/134 (19%), Positives = 44/134 (32%), Gaps = 32/134 (23%)

Query: 42  RGGFGSIYKAK-IQDGMEVVVK------GFNLQYGGAFKNLDVECNMMKIIRHQNLIKII 94
            G F  + K +    G+E   K          + G + + ++ E ++++ + H N+I + 
Sbjct: 22  SGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLH 81

Query: 95  SSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRL------------HIMIDVASAV 142
                     LILE +  G L             F  L              +  +   V
Sbjct: 82  DVYENRTDVVLILELVSGGEL-------------FDFLAQKESLSEEEATSFIKQILDGV 128

Query: 143 EYLHFGHSTHLLLK 156
            YLH     H  LK
Sbjct: 129 NYLHTKKIAHFDLK 142

>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876

 Score = 40.6 bits (95), Expect = 4e-04
 Identities = 7/41 (17%), Positives = 16/41 (39%)

Query: 1   YNRLQDSLRNSIGDLTSLKSLDLSNNNFSGLFLFSESNLIS 41
               +  + ++IG LT LK L    ++ +          ++
Sbjct: 332 GFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELT 372

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 40.4 bits (95), Expect = 4e-04
 Identities = 31/180 (17%), Positives = 53/180 (29%), Gaps = 61/180 (33%)

Query: 40  ISRGGFGSIYKAK-IQDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISS 96
           + +G FG + K K      E  VK  N           +  E  ++K + H N++K+   
Sbjct: 30  LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89

Query: 97  CSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRL------------HIMIDVASAVEY 144
                   ++ E    G L             F  +             I+  V S + Y
Sbjct: 90  LEDSSSFYIVGELYTGGEL-------------FDEIIKRKRFSEHDAARIIKQVFSGITY 136

Query: 145 LH-----------------------------FGHSTHLLLKEDQSLTQIQTLATISYMAP 175
           +H                             FG ST    +++  +     + T  Y+AP
Sbjct: 137 MHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTC--FQQNTKMKDR--IGTAYYIAP 192

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 40.0 bits (94), Expect = 4e-04
 Identities = 20/120 (16%), Positives = 45/120 (37%), Gaps = 28/120 (23%)

Query: 42  RGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDV--ECNMMKIIRHQNLIKIISSCS 98
           +G F  + +   +  G E      N +   A  +  +  E  + ++++H N++++  S S
Sbjct: 21  KGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSIS 80

Query: 99  KDDFKALILECMPHGSLGKCLSTSNYILDFFQRL------------HIMIDVASAVEYLH 146
           ++    LI + +  G L             F+ +            H +  +  AV + H
Sbjct: 81  EEGHHYLIFDLVTGGEL-------------FEDIVAREYYSEADASHCIQQILEAVLHCH 127

>3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605

 Score = 40.4 bits (95), Expect = 5e-04
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 1   YNRLQDSLRNSIGDLTSLKSLDLSNNNFSGLFLFSESNLIS 41
             +L+     +   L+SL+ L++S+NNF  L  F    L S
Sbjct: 479 QCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNS 519

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 40.0 bits (94), Expect = 5e-04
 Identities = 25/178 (14%), Positives = 57/178 (32%), Gaps = 61/178 (34%)

Query: 42  RGGFGSIYKA-KIQDGMEVVVKGFN--LQYGGAFKNLDVECNMMKIIRHQNLIKIISSCS 98
           +G F  + +      G+E   K  N        F+ L+ E  + + ++H N++++  S  
Sbjct: 39  KGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ 98

Query: 99  KDDFKALILECMPHGSLGKCLSTSNYILDFFQRL------------HIMIDVASAVEYLH 146
           ++ F  L+ + +  G L             F+ +            H +  +  ++ Y H
Sbjct: 99  EESFHYLVFDLVTGGEL-------------FEDIVAREFYSEADASHCIQQILESIAYCH 145

Query: 147 -----------------------------FGHSTHLLLKEDQSLTQIQTLATISYMAP 175
                                        FG +    + + ++        T  Y++P
Sbjct: 146 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIE--VNDSEAWHGF--AGTPGYLSP 199

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 39.5 bits (93), Expect = 5e-04
 Identities = 26/130 (20%), Positives = 42/130 (32%), Gaps = 28/130 (21%)

Query: 42  RGGFGSIYKAK-IQDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCS 98
           +G FG + K K      E  VK  N           +  E  ++K + H N++K+     
Sbjct: 32  KGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILE 91

Query: 99  KDDFKALILECMPHGSLGKCLSTSNYILDFFQRL------------HIMIDVASAVEYLH 146
                 ++ E    G L             F  +             I+  V S + Y+H
Sbjct: 92  DSSSFYIVGELYTGGEL-------------FDEIIKRKRFSEHDAARIIKQVFSGITYMH 138

Query: 147 FGHSTHLLLK 156
             +  H  LK
Sbjct: 139 KHNIVHRDLK 148

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 39.5 bits (93), Expect = 6e-04
 Identities = 29/134 (21%), Positives = 45/134 (33%), Gaps = 32/134 (23%)

Query: 42  RGGFGSIYKAK-IQDGMEVVVK------GFNLQYGGAFKNLDVECNMMKIIRHQNLIKII 94
            G F  + K +    G E   K        + + G + + ++ E N+++ IRH N+I + 
Sbjct: 15  SGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLH 74

Query: 95  SSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRL------------HIMIDVASAV 142
                     LILE +  G L             F  L              +  +   V
Sbjct: 75  DIFENKTDVVLILELVSGGEL-------------FDFLAEKESLTEDEATQFLKQILDGV 121

Query: 143 EYLHFGHSTHLLLK 156
            YLH     H  LK
Sbjct: 122 HYLHSKRIAHFDLK 135

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 39.6 bits (93), Expect = 6e-04
 Identities = 24/153 (15%), Positives = 50/153 (32%), Gaps = 37/153 (24%)

Query: 10  NSIGDLTSLKSLDLSNNNFSGLFLFSESNLISRGGFGSIYKA-KIQDGMEVVVKGFNLQY 68
            ++G  + ++ L  ++  F+  +   E   I  G +    +       ME  VK  +   
Sbjct: 2   QTVGVHSIVQQLHRNSIQFTDGYEVKE--DIGVGSYSVCKRCIHKATNMEFAVKIIDK-- 57

Query: 69  GGAFKNLDV--ECN-MMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYI 125
                  D   E   +++  +H N+I +        +  ++ E M  G L          
Sbjct: 58  ----SKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGEL---------- 103

Query: 126 LDFFQRL------------HIMIDVASAVEYLH 146
                ++             ++  +   VEYLH
Sbjct: 104 ---LDKILRQKFFSEREASAVLFTITKTVEYLH 133

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 39.3 bits (92), Expect = 7e-04
 Identities = 26/129 (20%), Positives = 53/129 (41%), Gaps = 10/129 (7%)

Query: 33  LFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMK-IIRHQNL 90
           +F    L+  G +G +YK + ++ G    +K  ++  G   + +  E NM+K    H+N+
Sbjct: 25  IFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-GDEEEEIKQEINMLKKYSHHRNI 83

Query: 91  IKIISSCSKDDFKA------LILECMPHGSLGKCL-STSNYILDFFQRLHIMIDVASAVE 143
                +  K +         L++E    GS+   + +T    L      +I  ++   + 
Sbjct: 84  ATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLS 143

Query: 144 YLHFGHSTH 152
           +LH     H
Sbjct: 144 HLHQHKVIH 152

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 39.2 bits (92), Expect = 7e-04
 Identities = 31/184 (16%), Positives = 51/184 (27%), Gaps = 71/184 (38%)

Query: 39  LISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDV-----ECNMMKIIRHQNLIK 92
            + RG    +Y+ K         +K          K +D      E  ++  + H N+IK
Sbjct: 60  ELGRGATSIVYRCKQKGTQKPYALKVLK-------KTVDKKIVRTEIGVLLRLSHPNIIK 112

Query: 93  IISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRL------------HIMIDVAS 140
           +          +L+LE +  G L             F R+              +  +  
Sbjct: 113 LKEIFETPTEISLVLELVTGGEL-------------FDRIVEKGYYSERDAADAVKQILE 159

Query: 141 AVEYLH-----------------------------FGHSTHLLLKEDQSLTQIQTLATIS 171
           AV YLH                             FG S    ++    +  +    T  
Sbjct: 160 AVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKI--VEHQVLMKTV--CGTPG 215

Query: 172 YMAP 175
           Y AP
Sbjct: 216 YCAP 219

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 39.4 bits (92), Expect = 7e-04
 Identities = 49/320 (15%), Positives = 102/320 (31%), Gaps = 66/320 (20%)

Query: 3   RLQDSLRNSIGDLTSLKSLDLSNNNFSGLFLFSESNLISRGGFGSIYKAK-IQDGMEVVV 61
             Q   R         K  +L +++F  +      + +  G  G ++K      G+ +  
Sbjct: 10  DEQQRKRLEAFLTQKQKVGELKDDDFEKI------SELGAGNGGVVFKVSHKPSGLVMAR 63

Query: 62  KGFNLQYGGA-FKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCLS 120
           K  +L+   A    +  E  ++       ++    +   D   ++ +E M  GSL + L 
Sbjct: 64  KLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK 123

Query: 121 TSNYILDFFQRLHIMIDVASAVEYLHFGHS--------THLLLKEDQ---------SLTQ 163
            +  I +      + I V   + YL   H         +++L+             S   
Sbjct: 124 KAGRIPEQILG-KVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 182

Query: 164 IQTLA-----TISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKH 206
           I ++A     T SYM+P            D ++ G+ ++E   G+ P       E+ L  
Sbjct: 183 IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMF 242

Query: 207 WVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAM------------------- 247
                   +             ++  M     M+    L                     
Sbjct: 243 GCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQ 302

Query: 248 ----ECTVESPNQRINAKEM 263
               +C +++P +R + K++
Sbjct: 303 DFVNKCLIKNPAERADLKQL 322

>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313

 Score = 39.4 bits (93), Expect = 7e-04
 Identities = 11/30 (36%), Positives = 14/30 (46%)

Query: 1   YNRLQDSLRNSIGDLTSLKSLDLSNNNFSG 30
           YN L  +L  SI  L +L  +    N  SG
Sbjct: 134 YNALSGTLPPSISSLPNLVGITFDGNRISG 163

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 39.1 bits (92), Expect = 7e-04
 Identities = 29/128 (22%), Positives = 45/128 (35%), Gaps = 26/128 (20%)

Query: 42  RGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKD 100
           RG +G +  A      +    K     +         E  +MK + H N+I++  +   +
Sbjct: 19  RGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDN 78

Query: 101 DFKALILECMPHGSLGKCLSTSNYILDFFQRL------------HIMIDVASAVEYLHFG 148
               L++E    G L             F+R+             IM DV SAV Y H  
Sbjct: 79  TDIYLVMELCTGGEL-------------FERVVHKRVFRESDAARIMKDVLSAVAYCHKL 125

Query: 149 HSTHLLLK 156
           +  H  LK
Sbjct: 126 NVAHRDLK 133

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 39.7 bits (93), Expect = 7e-04
 Identities = 33/210 (15%), Positives = 58/210 (27%), Gaps = 74/210 (35%)

Query: 21  LDLSNNNFSGLFLFSESNLISRGGFGSIYKAK-IQDGMEVVVK-------------GFNL 66
           +          +       +  G +G +   K      E  +K               N 
Sbjct: 27  VRKKEGKIGESYFKVR--KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNK 84

Query: 67  QYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYIL 126
                 + +  E +++K + H N+IK+        +  L+ E    G L           
Sbjct: 85  NIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGEL----------- 133

Query: 127 DFFQRL------------HIMIDVASAVEYLH---------------------------- 146
             F+++            +IM  + S + YLH                            
Sbjct: 134 --FEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIV 191

Query: 147 -FGHSTHLLLKEDQSLTQIQTLATISYMAP 175
            FG S+     +D  L     L T  Y+AP
Sbjct: 192 DFGLSSF--FSKDYKLRDR--LGTAYYIAP 217

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 39.2 bits (92), Expect = 8e-04
 Identities = 25/148 (16%), Positives = 52/148 (35%), Gaps = 36/148 (24%)

Query: 39  LISRGGFGSIYKAK-IQDGMEVVVKGFN----LQYGGAFKNLDVECNMMKIIRHQNLIK- 92
           L+  G +G + +    +      VK        +      N+  E  +++ +RH+N+I+ 
Sbjct: 12  LLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQL 71

Query: 93  --IISSCSKDDFKALILECMPHGSLGKCLSTSNYILD----------FFQRLHIMIDVAS 140
             ++ +  K     +++E    G         + + +          +F +L        
Sbjct: 72  VDVLYNEEKQKM-YMVMEYCVCGM----QEMLDSVPEKRFPVCQAHGYFCQL------ID 120

Query: 141 AVEYLHFGHSTH-------LLLKEDQSL 161
            +EYLH     H       LLL    +L
Sbjct: 121 GLEYLHSQGIVHKDIKPGNLLLTTGGTL 148

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 38.8 bits (91), Expect = 9e-04
 Identities = 31/144 (21%), Positives = 54/144 (37%), Gaps = 19/144 (13%)

Query: 24  SNNNFSGLFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFN-LQYGGAFKNLDVECNM 81
                  LF+F     +  G FG ++  +    G+E V+K  N  +     + ++ E  +
Sbjct: 16  FQGTIDDLFIFKR--KLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEV 73

Query: 82  MKIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRL--------- 132
           +K + H N+IKI           +++E    G L         I+    R          
Sbjct: 74  LKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGEL------LERIVSAQARGKALSEGYVA 127

Query: 133 HIMIDVASAVEYLHFGHSTHLLLK 156
            +M  + +A+ Y H  H  H  LK
Sbjct: 128 ELMKQMMNALAYFHSQHVVHKDLK 151

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	263
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	100.0
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	100.0
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	100.0
3uqc_A	286	Probable conserved transmembrane protein; structur	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	100.0
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	100.0
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
3bhy_A	283	Death-associated protein kinase 3; death associate	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	100.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	100.0
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	100.0
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	100.0
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	100.0
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	100.0
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	100.0
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	100.0
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	100.0
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	100.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	100.0
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	100.0
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	100.0
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	100.0
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	100.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	100.0
3an0_A	340	Dual specificity mitogen-activated protein kinase;	100.0
3fme_A	290	Dual specificity mitogen-activated protein kinase;	100.0
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	100.0
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	100.0
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	100.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	100.0
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	100.0
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	100.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	100.0
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	100.0
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	100.0
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	100.0
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	100.0
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	100.0
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	100.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	100.0
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	100.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	100.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	100.0
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	100.0
2a19_B	284	Interferon-induced, double-stranded RNA-activated	100.0
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	100.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	100.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	100.0
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	100.0
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	100.0
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	100.0
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	100.0
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	100.0
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	100.0
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	100.0
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	100.0
3aln_A	327	Dual specificity mitogen-activated protein kinase;	100.0
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	100.0
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	100.0
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	100.0
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	100.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	100.0
2dyl_A	318	Dual specificity mitogen-activated protein kinase	100.0
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	100.0
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	100.0
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	100.0
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	100.0
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.97
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.97
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.92
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.86
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.77
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.69
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.63
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.07
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	98.8
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	98.7
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	98.43
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.13
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	97.91
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	97.84
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.83
3ats_A	357	Putative uncharacterized protein; hypothetical pro	97.52
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	97.49
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.41
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	97.34
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	96.65
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	96.5
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	96.22
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	95.18
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	94.13
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	91.25
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	88.66
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	87.02
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	84.62
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	84.15
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	83.04
3mes_A	424	Choline kinase; malaria, structural genomics, stru	81.63

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=2.8e-50  Score=339.10  Aligned_cols=216  Identities=16%  Similarity=0.219  Sum_probs=172.3

Q ss_pred             ccccccccccceecccCceEEEEEE-ecCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeE
Q 039276           28 FSGLFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKA  104 (263)
Q Consensus        28 ~~~~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~  104 (263)
                      |...++|+..+.||+|+||.||+|+ ..+++.||||++....  ....+.+.+|+++++.++||||+++++++.+.+..|
T Consensus        20 f~sme~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~y   99 (350)
T 4b9d_A           20 FQSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLY   99 (350)
T ss_dssp             CSCCCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             CCcccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEE
Confidence            3455789999999999999999999 4569999999997653  334667889999999999999999999999999999


Q ss_pred             EEEeccCCCCHhhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-------------------
Q 039276          105 LILECMPHGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-------------------  164 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-------------------  164 (263)
                      +|||||++|+|.+++...+ ..+++..++.++.||+.||+|||+++|+||||||+|||++.                   
T Consensus       100 iVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~  179 (350)
T 4b9d_A          100 IVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV  179 (350)
T ss_dssp             EEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH
T ss_pred             EEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecCCc
Confidence            9999999999999997543 33788899999999999999999999999999999999543                   


Q ss_pred             ----cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccc
Q 039276          165 ----QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSRE  228 (263)
Q Consensus       165 ----~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (263)
                          ...||+.|+||            |||||||++|||++|+.||..... ...+..            +....     
T Consensus       180 ~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~-~~~~~~------------i~~~~-----  241 (350)
T 4b9d_A          180 ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM-KNLVLK------------IISGS-----  241 (350)
T ss_dssp             HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHH------------HHHTC-----
T ss_pred             ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-HHHHHH------------HHcCC-----
Confidence                23589999999            999999999999999999963210 011111            11111     


Q ss_pred             cccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          229 DEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       229 ~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                        ..+.+..+++++.+|+.+||+.||++|||++|+
T Consensus       242 --~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~  274 (350)
T 4b9d_A          242 --FPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSI  274 (350)
T ss_dssp             --CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             --CCCCCccCCHHHHHHHHHHccCChhHCcCHHHH
Confidence              012244567789999999999999999999764

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=4.4e-50  Score=332.83  Aligned_cols=212  Identities=25%  Similarity=0.441  Sum_probs=174.3

Q ss_pred             ccccccceecccCceEEEEEEec------CCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ------DGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKAL  105 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~------~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l  105 (263)
                      .+|...+.||+|+||+||+|.+.      ++..||||+++.......+.+.+|++++++++||||+++++++.+.+..++
T Consensus        13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l   92 (299)
T 4asz_A           13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM   92 (299)
T ss_dssp             GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence            45888999999999999999853      477899999987766667889999999999999999999999999999999


Q ss_pred             EEeccCCCCHhhhhhhCC------------CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc--------
Q 039276          106 ILECMPHGSLGKCLSTSN------------YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ--------  165 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~~------------~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~--------  165 (263)
                      |||||++|+|.+++...+            ..+++.++..++.|++.||+|||+++|+||||||+|||++.+        
T Consensus        93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki~DF  172 (299)
T 4asz_A           93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDF  172 (299)
T ss_dssp             EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCC
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCCcEEECCc
Confidence            999999999999997532            348999999999999999999999999999999999994332        


Q ss_pred             -----------------ccccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCc
Q 039276          166 -----------------TLATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNS  215 (263)
Q Consensus       166 -----------------~~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~  215 (263)
                                       ..||+.|+||            |||||||++|||+| |+.||......  .+           
T Consensus       173 Gla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~--~~-----------  239 (299)
T 4asz_A          173 GMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN--EV-----------  239 (299)
T ss_dssp             SCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--HH-----------
T ss_pred             ccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--HH-----------
Confidence                             2478999999            99999999999998 89998643111  00           


Q ss_pred             hhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          216 VMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                       ...+.      .+.+.+.+..+++++.+++.+||+.||++|||++||
T Consensus       240 -~~~i~------~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i  280 (299)
T 4asz_A          240 -IECIT------QGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGI  280 (299)
T ss_dssp             -HHHHH------HTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             -HHHHH------cCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHH
Confidence             11111      111223456788889999999999999999999864

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=6.2e-50  Score=336.47  Aligned_cols=213  Identities=23%  Similarity=0.265  Sum_probs=178.1

Q ss_pred             cccccccceecccCceEEEEEE-ecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           31 LFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      ...|+..+.||+|+||.||+|. ..+|+.||||++........+.+.+|+++++.++||||+++++++.+.+..|+||||
T Consensus        73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy  152 (346)
T 4fih_A           73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF  152 (346)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             hHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeC
Confidence            3569999999999999999999 456999999999877666677788999999999999999999999999999999999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-----------------------cc
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-----------------------QT  166 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-----------------------~~  166 (263)
                      |++|+|.+++...  .+++..+..++.||+.||+|||+++|+||||||+|||++.                       ..
T Consensus       153 ~~gg~L~~~l~~~--~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~  230 (346)
T 4fih_A          153 LEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSL  230 (346)
T ss_dssp             CTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCC
T ss_pred             CCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCCccccc
Confidence            9999999999764  3899999999999999999999999999999999999432                       34


Q ss_pred             cccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccc
Q 039276          167 LATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT  234 (263)
Q Consensus       167 ~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (263)
                      +||+.|+||            |||||||++|||++|+.||...    .....+          ..+..    ......+.
T Consensus       231 ~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~----~~~~~~----------~~i~~----~~~~~~~~  292 (346)
T 4fih_A          231 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE----PPLKAM----------KMIRD----NLPPRLKN  292 (346)
T ss_dssp             CSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS----CHHHHH----------HHHHH----SSCCCCSC
T ss_pred             ccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc----CHHHHH----------HHHHc----CCCCCCCc
Confidence            689999999            9999999999999999998632    111110          00000    01111223


Q ss_pred             hHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          235 KEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       235 ~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ...+++++.+|+.+||+.||++|||++|+
T Consensus       293 ~~~~s~~~~dli~~~L~~dP~~R~ta~e~  321 (346)
T 4fih_A          293 LHKVSPSLKGFLDRLLVRDPAQRATAAEL  321 (346)
T ss_dssp             GGGSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred             cccCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence            45678889999999999999999999864

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=5.8e-50  Score=332.02  Aligned_cols=211  Identities=19%  Similarity=0.237  Sum_probs=176.7

Q ss_pred             cccccccceecccCceEEEEEE-ecCCceEEEEEeecC---CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEE
Q 039276           31 LFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQ---YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALI  106 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv  106 (263)
                      .++|+..+.||+|+||+||+|. ..+++.||+|++...   .....+.+.+|+++++.++||||+++++++.+.+..|+|
T Consensus        31 ~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yiv  110 (311)
T 4aw0_A           31 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG  110 (311)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            3569999999999999999999 567999999999754   234567788999999999999999999999999999999


Q ss_pred             EeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc----------------------
Q 039276          107 LECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI----------------------  164 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~----------------------  164 (263)
                      ||||++|+|.+++...+. +++..+..++.||+.||+|||+++|+||||||+|||++.                      
T Consensus       111 mEy~~gG~L~~~i~~~~~-l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~  189 (311)
T 4aw0_A          111 LSYAKNGELLKYIRKIGS-FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA  189 (311)
T ss_dssp             ECCCTTEEHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCC
T ss_pred             EecCCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCcc
Confidence            999999999999987654 899999999999999999999999999999999999432                      


Q ss_pred             ---cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccc
Q 039276          165 ---QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSRED  229 (263)
Q Consensus       165 ---~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (263)
                         +.+||+.|+||            ||||+||++|||++|+.||.... ....+...            ....      
T Consensus       190 ~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~-~~~~~~~i------------~~~~------  250 (311)
T 4aw0_A          190 RANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN-EGLIFAKI------------IKLE------  250 (311)
T ss_dssp             CBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHH------------HHTC------
T ss_pred             cccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHH------------HcCC------
Confidence               23689999999            99999999999999999996321 01111111            1110      


Q ss_pred             ccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          230 EHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       230 ~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                        ...+..+++++.+|+.+||+.||++|||++|+
T Consensus       251 --~~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~  282 (311)
T 4aw0_A          251 --YDFPEKFFPKARDLVEKLLVLDATKRLGCEEM  282 (311)
T ss_dssp             --CCCCTTCCHHHHHHHHHHSCSSGGGSTTSGGG
T ss_pred             --CCCCcccCHHHHHHHHHHccCCHhHCcChHHH
Confidence              11234567789999999999999999999873

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=1.5e-49  Score=333.82  Aligned_cols=212  Identities=24%  Similarity=0.421  Sum_probs=176.2

Q ss_pred             ccccccceecccCceEEEEEEec------CCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ------DGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKAL  105 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~------~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l  105 (263)
                      .+|...++||+|+||.||+|.+.      +++.||||+++.......+.+.+|++++++++|||||++++++.+.+..++
T Consensus        41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l  120 (329)
T 4aoj_A           41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM  120 (329)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence            45788899999999999999853      478899999987766667889999999999999999999999999999999


Q ss_pred             EEeccCCCCHhhhhhhCC--------------CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-------
Q 039276          106 ILECMPHGSLGKCLSTSN--------------YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-------  164 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~~--------------~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-------  164 (263)
                      |||||++|+|.+++....              ..+++.++..++.|++.||+|||+++|+||||||+|||++.       
T Consensus       121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~~Ki~  200 (329)
T 4aoj_A          121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIG  200 (329)
T ss_dssp             EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEEC
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCCCcEEEc
Confidence            999999999999987532              23889999999999999999999999999999999999432       


Q ss_pred             ------------------cccccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCC
Q 039276          165 ------------------QTLATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLP  213 (263)
Q Consensus       165 ------------------~~~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~  213 (263)
                                        ...||+.|+||            |||||||++|||+| |+.||......  .+         
T Consensus       201 DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~--~~---------  269 (329)
T 4aoj_A          201 DFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT--EA---------  269 (329)
T ss_dssp             CCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH--HH---------
T ss_pred             ccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH--HH---------
Confidence                              23578999999            99999999999999 89998643111  00         


Q ss_pred             CchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          214 NSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                         ...+.      ...+.+.+..+++++.+++.+||+.||++|||++||
T Consensus       270 ---~~~i~------~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei  310 (329)
T 4aoj_A          270 ---IDCIT------QGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDV  310 (329)
T ss_dssp             ---HHHHH------HTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHH
T ss_pred             ---HHHHH------cCCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHH
Confidence               01111      111233456788889999999999999999999874

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=5.2e-49  Score=324.49  Aligned_cols=211  Identities=19%  Similarity=0.281  Sum_probs=169.3

Q ss_pred             ccccceecccCceEEEEEE-ecCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeec----CCeeEEE
Q 039276           34 FSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSK----DDFKALI  106 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~----~~~~~lv  106 (263)
                      |+..+.||+|+||.||+|. ..+++.||+|.+....  ....+.+.+|+++++.++||||+++++++.+    ....|+|
T Consensus        28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lv  107 (290)
T 3fpq_A           28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV  107 (290)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEE
Confidence            3667789999999999999 4568999999997652  3346678899999999999999999999865    3468999


Q ss_pred             EeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCC--ccccccCCCcccccc--------------------
Q 039276          107 LECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGH--STHLLLKEDQSLTQI--------------------  164 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--i~h~dlk~~nil~~~--------------------  164 (263)
                      ||||++|+|.+++..... +++..+..++.|++.||+|||+++  |+||||||+|||++.                    
T Consensus       108 mEy~~gg~L~~~l~~~~~-l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~~  186 (290)
T 3fpq_A          108 TELMTSGTLKTYLKRFKV-MKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASF  186 (290)
T ss_dssp             EECCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTTS
T ss_pred             EeCCCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCCc
Confidence            999999999999987554 899999999999999999999998  999999999999642                    


Q ss_pred             --cccccccccCc-----------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccc
Q 039276          165 --QTLATISYMAP-----------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEH  231 (263)
Q Consensus       165 --~~~g~~~y~aP-----------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (263)
                        ...||+.|+||           |||||||++|||+||+.||.........+......             ..     .
T Consensus       187 ~~~~~GTp~YmAPE~~~~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~-------------~~-----~  248 (290)
T 3fpq_A          187 AKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSG-------------VK-----P  248 (290)
T ss_dssp             BEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTT-------------CC-----C
T ss_pred             cCCcccCccccCHHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcC-------------CC-----C
Confidence              23689999999           99999999999999999996422111111111110             00     0


Q ss_pred             ccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          232 FMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       232 ~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ...+..+++++.+|+.+||+.||++|||++|+
T Consensus       249 ~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~  280 (290)
T 3fpq_A          249 ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDL  280 (290)
T ss_dssp             GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             CCCCccCCHHHHHHHHHHccCChhHCcCHHHH
Confidence            01233455679999999999999999999864

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=4.4e-49  Score=322.34  Aligned_cols=209  Identities=18%  Similarity=0.254  Sum_probs=166.5

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCC---CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      ++|+..+.||+|+||.||+|. ..+++.||+|++....   ......+.+|+++++.++||||+++++++.+.+..|+||
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm   92 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI   92 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence            469999999999999999999 5579999999997652   334567889999999999999999999999999999999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc----------------------c
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI----------------------Q  165 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~----------------------~  165 (263)
                      ||+ +|+|.+++...+. +++..+..++.|++.||+|||+++|+||||||+||+++.                      +
T Consensus        93 Ey~-~g~L~~~l~~~~~-l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~  170 (275)
T 3hyh_A           93 EYA-GNELFDYIVQRDK-MSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKT  170 (275)
T ss_dssp             ECC-CEEHHHHHHHSCS-CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC-----------
T ss_pred             eCC-CCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCCCCccCC
Confidence            999 6799999987654 999999999999999999999999999999999999433                      2


Q ss_pred             ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccc
Q 039276          166 TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHF  232 (263)
Q Consensus       166 ~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (263)
                      ..||+.|+||             ||||+||++|||++|+.||...     .......        .+..        ...
T Consensus       171 ~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~-----~~~~~~~--------~i~~--------~~~  229 (275)
T 3hyh_A          171 SCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE-----SIPVLFK--------NISN--------GVY  229 (275)
T ss_dssp             ----CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHH--------HHHH--------TCC
T ss_pred             eeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCC-----CHHHHHH--------HHHc--------CCC
Confidence            3689999999             9999999999999999999632     1111110        0000        011


Q ss_pred             cchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          233 MTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       233 ~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +.+..+++++.+++.+||+.||++|||++|+
T Consensus       230 ~~p~~~s~~~~~li~~~L~~dP~~R~s~~ei  260 (275)
T 3hyh_A          230 TLPKFLSPGAAGLIKRMLIVNPLNRISIHEI  260 (275)
T ss_dssp             CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             CCCCCCCHHHHHHHHHHccCChhHCcCHHHH
Confidence            2234567789999999999999999999864

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=1.1e-48  Score=324.77  Aligned_cols=214  Identities=22%  Similarity=0.350  Sum_probs=171.4

Q ss_pred             ccccccceecccCceEEEEEEecCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      +.+...+.||+|+||.||+|++.+  .||||+++...  ....+.+.+|++++++++||||+++++++.+ +..++||||
T Consensus        36 ~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy  112 (307)
T 3omv_A           36 SEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQW  112 (307)
T ss_dssp             TSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEc
Confidence            458889999999999999998653  58999987543  3346778999999999999999999998865 468999999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-------------------------
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-------------------------  164 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-------------------------  164 (263)
                      |++|+|.+++......+++..+..++.|++.||+|||+++|+||||||+|||++.                         
T Consensus       113 ~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~  192 (307)
T 3omv_A          113 CEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVE  192 (307)
T ss_dssp             CSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC-----------
T ss_pred             CCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcceeec
Confidence            9999999999876666999999999999999999999999999999999999432                         


Q ss_pred             cccccccccCc---------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccc
Q 039276          165 QTLATISYMAP---------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSRED  229 (263)
Q Consensus       165 ~~~g~~~y~aP---------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (263)
                      ...||+.||||               |||||||++|||+||+.||........ +.....            ....  .+
T Consensus       193 ~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~-~~~~~~------------~~~~--~p  257 (307)
T 3omv_A          193 QPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ-IIFMVG------------RGYA--SP  257 (307)
T ss_dssp             -CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH-HHHHHH------------TTCC--CC
T ss_pred             ccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHH-HHHHHh------------cCCC--CC
Confidence            23689999999               999999999999999999964321111 111111            0000  00


Q ss_pred             ccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          230 EHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       230 ~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .....+..+++++.+++.+||+.||++|||+.||
T Consensus       258 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei  291 (307)
T 3omv_A          258 DLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQI  291 (307)
T ss_dssp             CSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHH
T ss_pred             CcccccccchHHHHHHHHHHcCCCHhHCcCHHHH
Confidence            0112245677889999999999999999999864

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=6.8e-49  Score=327.03  Aligned_cols=211  Identities=23%  Similarity=0.415  Sum_probs=172.3

Q ss_pred             cccccceecccCceEEEEEEec------CCceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEE
Q 039276           33 LFSESNLISRGGFGSIYKAKIQ------DGMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKAL  105 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~~------~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l  105 (263)
                      .++..+.||+|+||+||+|.+.      +++.||||+++... ....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus        27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l  106 (308)
T 4gt4_A           27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM  106 (308)
T ss_dssp             GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred             HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence            4677889999999999999852      46789999997653 3456789999999999999999999999999999999


Q ss_pred             EEeccCCCCHhhhhhhCC---------------CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc------
Q 039276          106 ILECMPHGSLGKCLSTSN---------------YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI------  164 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~------  164 (263)
                      |||||++|+|.+++....               ..+++..+..++.|++.||+|||+++++||||||+|||++.      
T Consensus       107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~~Ki  186 (308)
T 4gt4_A          107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKI  186 (308)
T ss_dssp             EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEE
T ss_pred             EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECCCCCEEE
Confidence            999999999999996431               23789999999999999999999999999999999999432      


Q ss_pred             -------------------cccccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcC
Q 039276          165 -------------------QTLATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLL  212 (263)
Q Consensus       165 -------------------~~~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~  212 (263)
                                         ...||+.|+||            |||||||++|||+| |+.||.....  ..+.       
T Consensus       187 ~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~--~~~~-------  257 (308)
T 4gt4_A          187 SDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN--QDVV-------  257 (308)
T ss_dssp             CCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH--HHHH-------
T ss_pred             CCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH--HHHH-------
Confidence                               23578899999            99999999999998 8999864311  1111       


Q ss_pred             CCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          213 PNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                           ..+.      ...+.+.+..+++++.+++.+||+.||++|||++||
T Consensus       258 -----~~i~------~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei  297 (308)
T 4gt4_A          258 -----EMIR------NRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDI  297 (308)
T ss_dssp             -----HHHH------TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             -----HHHH------cCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHH
Confidence                 1111      112234466788889999999999999999999875

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=7.8e-49  Score=337.47  Aligned_cols=213  Identities=23%  Similarity=0.269  Sum_probs=177.9

Q ss_pred             cccccccceecccCceEEEEEE-ecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           31 LFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      ...|+..+.||+|+||.||+|. ..+|+.||||++........+.+.+|+.+++.++||||+++++++.+.+..||||||
T Consensus       150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy  229 (423)
T 4fie_A          150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF  229 (423)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence            3569999999999999999999 456999999999887666777889999999999999999999999999999999999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-----------------------cc
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-----------------------QT  166 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-----------------------~~  166 (263)
                      |++|+|.+++....  +++..+..++.||+.||+|||+++|+||||||+|||++.                       ..
T Consensus       230 ~~gG~L~~~i~~~~--l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~  307 (423)
T 4fie_A          230 LEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSL  307 (423)
T ss_dssp             CTTEEHHHHHHHSC--CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCCC
T ss_pred             CCCCcHHHHHhccC--CCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCcccccc
Confidence            99999999997543  899999999999999999999999999999999999432                       23


Q ss_pred             cccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccc
Q 039276          167 LATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT  234 (263)
Q Consensus       167 ~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (263)
                      +||+.||||            |||||||++|||++|+.||...    .....+          ..+..    ........
T Consensus       308 ~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~----~~~~~~----------~~i~~----~~~~~~~~  369 (423)
T 4fie_A          308 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE----PPLKAM----------KMIRD----NLPPRLKN  369 (423)
T ss_dssp             EECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS----CHHHHH----------HHHHH----SCCCCCSC
T ss_pred             ccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc----CHHHHH----------HHHHc----CCCCCCcc
Confidence            689999999            9999999999999999998632    111100          00000    00111122


Q ss_pred             hHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          235 KEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       235 ~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ...+++++.+|+.+||+.||++|||++|+
T Consensus       370 ~~~~s~~~~dli~~~L~~dP~~R~ta~el  398 (423)
T 4fie_A          370 LHKVSPSLKGFLDRLLVRDPAQRATAAEL  398 (423)
T ss_dssp             TTSSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred             cccCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence            44667789999999999999999999864

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=1.3e-48  Score=327.48  Aligned_cols=208  Identities=21%  Similarity=0.283  Sum_probs=171.9

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      ..|...++||+|+||.||+|+ ..+|+.||||+++.....     .+|+.+++.++|||||++++++.+.+..|+|||||
T Consensus        58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~~-----~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~  132 (336)
T 4g3f_A           58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELL  132 (336)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC-----THHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHhH-----HHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence            457888899999999999999 456999999999865322     36999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-------------------------
Q 039276          111 PHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-------------------------  165 (263)
Q Consensus       111 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-------------------------  165 (263)
                      ++|+|.+++...+. +++..+..++.|++.||+|||+++|+||||||+|||++.+                         
T Consensus       133 ~gg~L~~~l~~~~~-l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~  211 (336)
T 4g3f_A          133 EGGSLGQLIKQMGC-LPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLL  211 (336)
T ss_dssp             TTCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC----------
T ss_pred             CCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccccee
Confidence            99999999987654 8999999999999999999999999999999999995321                         


Q ss_pred             ----ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccc
Q 039276          166 ----TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSRED  229 (263)
Q Consensus       166 ----~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (263)
                          ..||+.||||            |||||||++|||++|+.||........ +...            ....     .
T Consensus       212 ~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~-~~~i------------~~~~-----~  273 (336)
T 4g3f_A          212 TGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL-CLKI------------ASEP-----P  273 (336)
T ss_dssp             --CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC-HHHH------------HHSC-----C
T ss_pred             cCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH-HHHH------------HcCC-----C
Confidence                2489999999            999999999999999999964322211 1111            1110     0


Q ss_pred             ccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          230 EHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       230 ~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .....+..+++++.+++.+||+.||++|||+.||
T Consensus       274 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el  307 (336)
T 4g3f_A          274 PIREIPPSCAPLTAQAIQEGLRKEPVHRASAMEL  307 (336)
T ss_dssp             GGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             CchhcCccCCHHHHHHHHHHccCCHhHCcCHHHH
Confidence            0011345678889999999999999999999764

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=3e-48  Score=321.51  Aligned_cols=208  Identities=19%  Similarity=0.199  Sum_probs=167.2

Q ss_pred             ccccccceecccCceEEEEEEec----CCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ----DGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKAL  105 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~----~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l  105 (263)
                      ++|+..+.||+|+||+||+|+..    +++.||+|+++...  ......+.+|+++++.++||||+++++++.+.+..|+
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i  103 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL  103 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence            56999999999999999999842    46789999997652  2334567789999999999999999999999999999


Q ss_pred             EEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc---------------------
Q 039276          106 ILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI---------------------  164 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~---------------------  164 (263)
                      |||||++|+|.+++...+. +++..+..++.|++.||+|||+++|+||||||+|||.+.                     
T Consensus       104 vmEy~~gg~L~~~l~~~~~-l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~  182 (304)
T 3ubd_A          104 ILDFLRGGDLFTRLSKEVM-FTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK  182 (304)
T ss_dssp             EECCCTTCEEHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC-----CC
T ss_pred             EEEcCCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceeccCCCcc
Confidence            9999999999999987654 899999999999999999999999999999999999432                     


Q ss_pred             --cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccc
Q 039276          165 --QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDE  230 (263)
Q Consensus       165 --~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (263)
                        ...||+.|+||            |||||||++|||+||+.||..... ...+...            ...        
T Consensus       183 ~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~-~~~~~~i------------~~~--------  241 (304)
T 3ubd_A          183 AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR-KETMTMI------------LKA--------  241 (304)
T ss_dssp             CCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHH------------HHC--------
T ss_pred             ccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCH-HHHHHHH------------HcC--------
Confidence              23689999999            999999999999999999963211 0111111            110        


Q ss_pred             cccchHHHHHHHHHhhccccccCcCCCCCcc
Q 039276          231 HFMTKEQCMSFVFNLAMECTVESPNQRINAK  261 (263)
Q Consensus       231 ~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~  261 (263)
                      ..+.+..+++++.+|+.+||+.||++|||+.
T Consensus       242 ~~~~p~~~s~~~~~li~~~L~~dP~~R~ta~  272 (304)
T 3ubd_A          242 KLGMPQFLSPEAQSLLRMLFKRNPANRLGAG  272 (304)
T ss_dssp             CCCCCTTSCHHHHHHHHHHTCSSGGGSTTCS
T ss_pred             CCCCCCcCCHHHHHHHHHHcccCHHHCCCCC
Confidence            1123456778899999999999999999973

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=3.7e-46  Score=310.71  Aligned_cols=227  Identities=22%  Similarity=0.264  Sum_probs=166.0

Q ss_pred             ccccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCC----eeEEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDD----FKALIL  107 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~----~~~lv~  107 (263)
                      .+|...+.||+|+||.||+|++. |+.||||+++.... .......|+..+.+++||||+++++++.+.+    ..|+||
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~   80 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS   80 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEET-TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEEC-CEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence            35888899999999999999875 89999999975532 1122334666667889999999999997643    579999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccC--------CccccccCCCcccccc---------------
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFG--------HSTHLLLKEDQSLTQI---------------  164 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--------~i~h~dlk~~nil~~~---------------  164 (263)
                      |||++|+|.+++....  +++..+..++.|++.||+|||.+        +|+||||||+|||++.               
T Consensus        81 Ey~~~gsL~~~l~~~~--l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~  158 (303)
T 3hmm_A           81 DYHEHGSLFDYLNRYT--VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH  158 (303)
T ss_dssp             ECCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred             cCCCCCcHHHHHHhCC--CCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccc
Confidence            9999999999997653  78999999999999999999987        8999999999999432               


Q ss_pred             ------------cccccccccCc------------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCC-
Q 039276          165 ------------QTLATISYMAP------------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLP-  213 (263)
Q Consensus       165 ------------~~~g~~~y~aP------------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~-  213 (263)
                                  ...||+.|+||                  |||||||++|||+||+.||.........+..+...... 
T Consensus       159 ~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~  238 (303)
T 3hmm_A          159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV  238 (303)
T ss_dssp             ETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred             cCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchH
Confidence                        12589999999                  99999999999999998876543333222211110000 


Q ss_pred             Cchhhhh-hhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          214 NSVMKVV-SANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       214 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ......+ .....+.-+. ......+++.+.+++.+||+.||++||||.||
T Consensus       239 ~~~~~~~~~~~~rp~~p~-~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei  288 (303)
T 3hmm_A          239 EEMRKVVCEQKLRPNIPN-RWQSCEALRVMAKIMRECWYANGAARLTALRI  288 (303)
T ss_dssp             HHHHHHHTTSCCCCCCCG-GGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHH
T ss_pred             HHHHHHHhcccCCCCCCc-cccchHHHHHHHHHHHHHcccCHhHCcCHHHH
Confidence            0001111 1111111111 11123567789999999999999999999874

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=4.1e-46  Score=315.44  Aligned_cols=213  Identities=22%  Similarity=0.335  Sum_probs=171.3

Q ss_pred             ccccccceecccCceEEEEEEecC------CceEEEEEeecCCC-chHHHHHHHHHHHhhcCC-CcceeEeeEeec-CCe
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQD------GMEVVVKGFNLQYG-GAFKNLDVECNMMKIIRH-QNLIKIISSCSK-DDF  102 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~------~~~v~vK~~~~~~~-~~~~~~~~e~~~l~~~~h-~~i~~~~~~~~~-~~~  102 (263)
                      ++|+..+.||+|+||+||+|.+..      ++.||||.+..... ...+.+.+|++++++++| ||||+++++|.+ ++.
T Consensus        64 ~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~  143 (353)
T 4ase_A           64 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP  143 (353)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSC
T ss_pred             HHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCE
Confidence            569999999999999999998432      35799999976533 345678899999999965 999999999865 456


Q ss_pred             eEEEEeccCCCCHhhhhhhCC---------------CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc---
Q 039276          103 KALILECMPHGSLGKCLSTSN---------------YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI---  164 (263)
Q Consensus       103 ~~lv~e~~~~~~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~---  164 (263)
                      .++|||||++|+|.++++...               ..+++..+..++.|++.||+|||+++++||||||+|||++.   
T Consensus       144 ~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~  223 (353)
T 4ase_A          144 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV  223 (353)
T ss_dssp             CEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGC
T ss_pred             EEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceeeCCCCC
Confidence            899999999999999997532               23788999999999999999999999999999999999432   


Q ss_pred             ----------------------cccccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhh
Q 039276          165 ----------------------QTLATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVN  209 (263)
Q Consensus       165 ----------------------~~~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~  209 (263)
                                            ...||+.||||            |||||||++|||+| |+.||......+. +     
T Consensus       224 vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~-~-----  297 (353)
T 4ase_A          224 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-F-----  297 (353)
T ss_dssp             EEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH-H-----
T ss_pred             EEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHH-H-----
Confidence                                  23578899999            99999999999998 9999864322111 1     


Q ss_pred             hcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          210 DLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                             ...+.      .+.+.+.+..+++++.+++.+||+.||++|||++||
T Consensus       298 -------~~~i~------~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~ei  338 (353)
T 4ase_A          298 -------CRRLK------EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL  338 (353)
T ss_dssp             -------HHHHH------HTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             -------HHHHH------cCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHH
Confidence                   11111      112233456678889999999999999999999874

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=1.1e-45  Score=306.68  Aligned_cols=209  Identities=20%  Similarity=0.302  Sum_probs=160.6

Q ss_pred             cccccceecccCceEEEEEE-ecCCceEEEEEeecCCC-chHHHHHHHHHHHhhcCCCcceeEeeEeecCC---------
Q 039276           33 LFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYG-GAFKNLDVECNMMKIIRHQNLIKIISSCSKDD---------  101 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~---------  101 (263)
                      +|+..+.||+|+||.||+|+ ..+++.||||++..... ...+.+.+|+++++.++||||+++++++.+.+         
T Consensus         6 dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~   85 (299)
T 4g31_A            6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSS   85 (299)
T ss_dssp             HEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC---------
T ss_pred             hCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccC
Confidence            58999999999999999999 45699999999976543 34567889999999999999999999986543         


Q ss_pred             ---eeEEEEeccCCCCHhhhhhhCCCc--ccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------
Q 039276          102 ---FKALILECMPHGSLGKCLSTSNYI--LDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------  165 (263)
Q Consensus       102 ---~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------  165 (263)
                         ..|++||||++|+|.+++......  .+...++.++.|++.||+|||+++|+||||||+||+++.+           
T Consensus        86 ~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla  165 (299)
T 4g31_A           86 PKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLV  165 (299)
T ss_dssp             -CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCCCC
T ss_pred             CCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccCccc
Confidence               479999999999999999865432  4556688999999999999999999999999999994321           


Q ss_pred             ------------------------ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhh
Q 039276          166 ------------------------TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVN  209 (263)
Q Consensus       166 ------------------------~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~  209 (263)
                                              ..||+.|+||            |||||||++|||++   ||....   .....+. 
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~---~~~~~~~-  238 (299)
T 4g31_A          166 TAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM---ERVRTLT-  238 (299)
T ss_dssp             --------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH---HHHHHHH-
T ss_pred             eecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc---HHHHHHH-
Confidence                                    2589999999            99999999999996   764211   0011000 


Q ss_pred             hcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          210 DLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                              .+..       ...++.....++.+.+++.+||+.||++|||+.||
T Consensus       239 --------~~~~-------~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~ei  277 (299)
T 4g31_A          239 --------DVRN-------LKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINI  277 (299)
T ss_dssp             --------HHHT-------TCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             --------HHhc-------CCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHH
Confidence                    0000       00111234455667899999999999999999764

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=3.7e-45  Score=314.46  Aligned_cols=230  Identities=19%  Similarity=0.159  Sum_probs=172.2

Q ss_pred             cccccccceecccCceEEEEEE-ecCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeec------CC
Q 039276           31 LFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSK------DD  101 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~------~~  101 (263)
                      .++|+..+.||+|+||.||+|. ..+|+.||||++....  ....+.+.+|+++++.++||||+++++++..      .+
T Consensus        53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~  132 (398)
T 4b99_A           53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK  132 (398)
T ss_dssp             CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred             CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence            3569999999999999999999 4579999999997653  2345678899999999999999999998754      35


Q ss_pred             eeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-----------------
Q 039276          102 FKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-----------------  164 (263)
Q Consensus       102 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-----------------  164 (263)
                      ..|+|||||. |+|.+++...+. +++..+..++.||+.||+|||+++|+||||||+||+.+.                 
T Consensus       133 ~~~ivmE~~~-g~L~~~i~~~~~-l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~  210 (398)
T 4b99_A          133 SVYVVLDLME-SDLHQIIHSSQP-LTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCT  210 (398)
T ss_dssp             CEEEEEECCS-EEHHHHHTSSSC-CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC--
T ss_pred             EEEEEEeCCC-CCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceeeeccc
Confidence            7899999996 689999976554 999999999999999999999999999999999999432                 


Q ss_pred             ----------cccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhh--h
Q 039276          165 ----------QTLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMK--V  219 (263)
Q Consensus       165 ----------~~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~--~  219 (263)
                                ...||+.|+||             ||||+||++|||++|+.||..... ...+..............  .
T Consensus       211 ~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~-~~~l~~I~~~~g~p~~~~~~~  289 (398)
T 4b99_A          211 SPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNY-VHQLQLIMMVLGTPSPAVIQA  289 (398)
T ss_dssp             -----CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSH-HHHHHHHHHHHCCCCGGGTC-
T ss_pred             CccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCH-HHHHHHHHHhcCCCChHHhhh
Confidence                      23689999999             999999999999999999964211 111222221111111000  0


Q ss_pred             hhhc----cccccccccc-----chHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          220 VSAN----LLSREDEHFM-----TKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       220 ~~~~----~~~~~~~~~~-----~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ....    .....+...+     ....+++++.+|+.+||+.||++|||++|+
T Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~  342 (398)
T 4b99_A          290 VGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAA  342 (398)
T ss_dssp             ----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred             hhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHH
Confidence            0000    0000000000     113457789999999999999999999763

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=1.4e-44  Score=307.61  Aligned_cols=226  Identities=18%  Similarity=0.227  Sum_probs=170.4

Q ss_pred             ccccccceecccCceEEEEEEec----CCceEEEEEeecCCCchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCeeEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ----DGMEVVVKGFNLQYGGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFKALI  106 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~----~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv  106 (263)
                      ++|+..+.||+|+||.||+|+..    +++.||+|.+....  ...++.+|+++++.+ +||||+++++++.+.+..|+|
T Consensus        21 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lv   98 (361)
T 4f9c_A           21 NVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIA   98 (361)
T ss_dssp             GTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEE
T ss_pred             CcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEE
Confidence            45999999999999999999742    46789999986553  345678899999988 699999999999999999999


Q ss_pred             EeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc---------------------
Q 039276          107 LECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ---------------------  165 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~---------------------  165 (263)
                      |||+++++|.+++..    +++..+..++.|++.||+|||++||+||||||+|||.+..                     
T Consensus        99 mE~~~g~~L~~~~~~----l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~  174 (361)
T 4f9c_A           99 MPYLEHESFLDILNS----LSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIE  174 (361)
T ss_dssp             EECCCCCCHHHHHTT----CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCG
T ss_pred             EeCCCcccHHHHHcC----CCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCcccc
Confidence            999999999999843    8899999999999999999999999999999999995321                     


Q ss_pred             -------------------------------ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCC
Q 039276          166 -------------------------------TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGE  201 (263)
Q Consensus       166 -------------------------------~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~  201 (263)
                                                     .+||+.|+||             ||||+||++|||++|+.||.......
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~  254 (361)
T 4f9c_A          175 LLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDL  254 (361)
T ss_dssp             GGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHH
T ss_pred             ccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCHH
Confidence                                           1489999999             99999999999999999996433222


Q ss_pred             chhhhHhhhcCCCc----------------------hhhhhhhcc------------cccccccccchHHHHHHHHHhhc
Q 039276          202 MTLKHWVNDLLPNS----------------------VMKVVSANL------------LSREDEHFMTKEQCMSFVFNLAM  247 (263)
Q Consensus       202 ~~~~~~~~~~~~~~----------------------~~~~~~~~~------------~~~~~~~~~~~~~~~~~l~~l~~  247 (263)
                      ..+........+..                      .........            .............+++++.+|+.
T Consensus       255 ~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~  334 (361)
T 4f9c_A          255 TALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLD  334 (361)
T ss_dssp             HHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHHHHHH
T ss_pred             HHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHHHH
Confidence            22222211111000                      000000000            00000001112356778999999


Q ss_pred             cccccCcCCCCCccCC
Q 039276          248 ECTVESPNQRINAKEM  263 (263)
Q Consensus       248 ~cl~~~p~~Rpt~~ev  263 (263)
                      +||+.||++|||++|+
T Consensus       335 ~lL~~dP~~R~ta~ea  350 (361)
T 4f9c_A          335 KLLDLNPASRITAEEA  350 (361)
T ss_dssp             HHTCSCTTTSCCHHHH
T ss_pred             HHCcCChhHCcCHHHH
Confidence            9999999999999763

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=2.8e-44  Score=322.66  Aligned_cols=215  Identities=17%  Similarity=0.200  Sum_probs=178.4

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      ++|+..+.||+|+||.||+|. ..+|+.||+|.+........+.+.+|+++++.++||||+++++++.+.+..|++||||
T Consensus       157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~  236 (573)
T 3uto_A          157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM  236 (573)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence            579999999999999999999 5579999999998776666778889999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc------------------------cc
Q 039276          111 PHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI------------------------QT  166 (263)
Q Consensus       111 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~------------------------~~  166 (263)
                      ++|+|.+++......+++..+..++.||+.||+|||+++|+||||||+||++..                        ..
T Consensus       237 ~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~~~~  316 (573)
T 3uto_A          237 SGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT  316 (573)
T ss_dssp             CCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEEEEE
T ss_pred             CCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCceeee
Confidence            999999999765555999999999999999999999999999999999999642                        12


Q ss_pred             cccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccc
Q 039276          167 LATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT  234 (263)
Q Consensus       167 ~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (263)
                      .||+.|+||            |||||||++|||++|+.||..... ...+......            ..    ......
T Consensus       317 ~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~-~~~~~~i~~~------------~~----~~~~~~  379 (573)
T 3uto_A          317 TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND-DETLRNVKSC------------DW----NMDDSA  379 (573)
T ss_dssp             CSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH-HHHHHHHHTT------------CC----CCCSGG
T ss_pred             EECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-HHHHHHHHhC------------CC----CCCccc
Confidence            589999999            999999999999999999964211 1111111110            00    001112


Q ss_pred             hHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          235 KEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       235 ~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ...+++++.+|+.+||+.||.+|||+.|+
T Consensus       380 ~~~~s~~~~dli~~~L~~dp~~R~t~~e~  408 (573)
T 3uto_A          380 FSGISEDGKDFIRKLLLADPNTRMTIHQA  408 (573)
T ss_dssp             GTTSCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred             ccCCCHHHHHHHHHHccCChhHCcCHHHH
Confidence            34567789999999999999999998763

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=3.3e-43  Score=315.78  Aligned_cols=212  Identities=18%  Similarity=0.199  Sum_probs=170.1

Q ss_pred             ccccccccceecccCceEEEEEE-ecCCceEEEEEeecCC---CchHHHHHH---HHHHHhhcCCCcceeEeeEeecCCe
Q 039276           30 GLFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY---GGAFKNLDV---ECNMMKIIRHQNLIKIISSCSKDDF  102 (263)
Q Consensus        30 ~~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~---~~~~~~~~~---e~~~l~~~~h~~i~~~~~~~~~~~~  102 (263)
                      ..++|+..+.||+|+||+||+|+ ..+|+.||+|++.+..   ........+   ++++++.++||||+++++++++.+.
T Consensus       187 slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~  266 (689)
T 3v5w_A          187 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDK  266 (689)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSE
T ss_pred             chHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCE
Confidence            34679999999999999999999 5569999999997541   122223333   3566777899999999999999999


Q ss_pred             eEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc------------------
Q 039276          103 KALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI------------------  164 (263)
Q Consensus       103 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~------------------  164 (263)
                      .|+|||||+||+|.+++...+. +++..+..++.||+.||+|||+++|+||||||+|||++.                  
T Consensus       267 lylVmEy~~GGdL~~~l~~~~~-l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~  345 (689)
T 3v5w_A          267 LSFILDLMNGGDLHYHLSQHGV-FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK  345 (689)
T ss_dssp             EEEEECCCCSCBHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred             EEEEEecCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccceeeecCCC
Confidence            9999999999999999987654 899999999999999999999999999999999999543                  


Q ss_pred             ---cccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccc
Q 039276          165 ---QTLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSRE  228 (263)
Q Consensus       165 ---~~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (263)
                         ..+||+.|+||             |||||||++|||++|+.||......+.  .            .+......   
T Consensus       346 ~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~--~------------~i~~~i~~---  408 (689)
T 3v5w_A          346 KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--H------------EIDRMTLT---  408 (689)
T ss_dssp             CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCH--H------------HHHHHHHH---
T ss_pred             CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH--H------------HHHHhhcC---
Confidence               24799999999             999999999999999999964322111  0            01111000   


Q ss_pred             cccccchHHHHHHHHHhhccccccCcCCCCCc
Q 039276          229 DEHFMTKEQCMSFVFNLAMECTVESPNQRINA  260 (263)
Q Consensus       229 ~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~  260 (263)
                       .....+..+++++.+|+.+||+.||++|++.
T Consensus       409 -~~~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~  439 (689)
T 3v5w_A          409 -MAVELPDSFSPELRSLLEGLLQRDVNRRLGC  439 (689)
T ss_dssp             -CCCCCCTTSCHHHHHHHHHHTCSCGGGCTTC
T ss_pred             -CCCCCCccCCHHHHHHHHHHccCCHhHCCCC
Confidence             0112345677889999999999999999984

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=5.2e-41  Score=279.27  Aligned_cols=213  Identities=23%  Similarity=0.325  Sum_probs=176.3

Q ss_pred             cccccccceecccCceEEEEEE-ecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           31 LFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      ..+|+..+.||+|+||.||+|. ..+++.||+|.+........+.+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   98 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence            3569999999999999999999 466899999999877666677888999999999999999999999999999999999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-----------------------cc
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-----------------------QT  166 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-----------------------~~  166 (263)
                      +++++|.+++...  .+++..+..++.|++.||+|||+++++||||||+||+.+.                       ..
T Consensus        99 ~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~  176 (297)
T 3fxz_A           99 LAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM  176 (297)
T ss_dssp             CTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCC
T ss_pred             CCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccCCc
Confidence            9999999999765  3889999999999999999999999999999999999532                       22


Q ss_pred             cccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccc
Q 039276          167 LATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT  234 (263)
Q Consensus       167 ~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (263)
                      .||+.|+||            |||||||++|||++|+.||.....    .....         .+..     ........
T Consensus       177 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~----~~~~~---------~~~~-----~~~~~~~~  238 (297)
T 3fxz_A          177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP----LRALY---------LIAT-----NGTPELQN  238 (297)
T ss_dssp             CSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH----HHHHH---------HHHH-----HCSCCCSC
T ss_pred             cCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH----HHHHH---------HHHh-----CCCCCCCC
Confidence            578899999            999999999999999999864211    11000         0000     00011123


Q ss_pred             hHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          235 KEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       235 ~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +..+++.+.+++.+||+.||++|||++|+
T Consensus       239 ~~~~~~~~~~li~~~l~~dp~~Rps~~el  267 (297)
T 3fxz_A          239 PEKLSAIFRDFLNRCLEMDVEKRGSAKEL  267 (297)
T ss_dssp             GGGSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred             ccccCHHHHHHHHHHccCChhHCcCHHHH
Confidence            45667789999999999999999999764

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=4.2e-41  Score=283.50  Aligned_cols=211  Identities=22%  Similarity=0.263  Sum_probs=174.3

Q ss_pred             cccccccceecccCceEEEEEEe-cCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           31 LFLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      ...|...+.||+|+||.||+|.. .+++.||+|++....  ....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus        14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~   93 (328)
T 3fe3_A           14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM   93 (328)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence            35699999999999999999994 679999999997653  334667889999999999999999999999999999999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc----------------------c
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI----------------------Q  165 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~----------------------~  165 (263)
                      ||+++++|.+++...+. +++..+..++.|++.||+|||+++++||||||+||+.+.                      .
T Consensus        94 e~~~~~~L~~~l~~~~~-l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~  172 (328)
T 3fe3_A           94 EYASGGEVFDYLVAHGR-MKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDA  172 (328)
T ss_dssp             CCCTTCBHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGGGT
T ss_pred             ECCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCcccc
Confidence            99999999999976554 899999999999999999999999999999999999532                      2


Q ss_pred             ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccc
Q 039276          166 TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHF  232 (263)
Q Consensus       166 ~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (263)
                      ..||+.|+||             |||||||++|+|++|+.||....     ......        .+..        ...
T Consensus       173 ~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----~~~~~~--------~i~~--------~~~  231 (328)
T 3fe3_A          173 FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN-----LKELRE--------RVLR--------GKY  231 (328)
T ss_dssp             TSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHH--------HHHH--------CCC
T ss_pred             ccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC-----HHHHHH--------HHHh--------CCC
Confidence            3578999999             99999999999999999986421     111100        0000        011


Q ss_pred             cchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          233 MTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       233 ~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ..+..+++++.+++.+||+.||.+|||++|+
T Consensus       232 ~~p~~~s~~~~~li~~~L~~dP~~R~t~~ei  262 (328)
T 3fe3_A          232 RIPFYMSTDCENLLKRFLVLNPIKRGTLEQI  262 (328)
T ss_dssp             CCCTTSCHHHHHHHHHHCCSSTTTSCCHHHH
T ss_pred             CCCCCCCHHHHHHHHHHCCCChhHCcCHHHH
Confidence            1233456779999999999999999999764

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=1e-40  Score=278.87  Aligned_cols=214  Identities=21%  Similarity=0.335  Sum_probs=176.8

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      ++|...+.||+|+||.||++.. .++..||+|.+........+.+.+|+++++.++||||+++++++.+.+..++||||+
T Consensus        10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~   89 (310)
T 3s95_A           10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI   89 (310)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence            4599999999999999999994 568999999987666667788999999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc--------------------------
Q 039276          111 PHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI--------------------------  164 (263)
Q Consensus       111 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~--------------------------  164 (263)
                      ++++|.+++......+++..+..++.|++.||+|||+++++|+||||+||+.+.                          
T Consensus        90 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  169 (310)
T 3s95_A           90 KGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLR  169 (310)
T ss_dssp             TTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC----------
T ss_pred             CCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceecccccccccccc
Confidence            999999999886666899999999999999999999999999999999999532                          


Q ss_pred             -----------cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhh
Q 039276          165 -----------QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVS  221 (263)
Q Consensus       165 -----------~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (263)
                                 ...||+.|+||            |||||||++|||++|..||............        .......
T Consensus       170 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~--------~~~~~~~  241 (310)
T 3s95_A          170 SLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGL--------NVRGFLD  241 (310)
T ss_dssp             ----------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSB--------CHHHHHH
T ss_pred             cccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhh--------hhhcccc
Confidence                       22478889999            9999999999999999998654222211100        0001110


Q ss_pred             hcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          222 ANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .          ..+..+++++.+++.+||+.||++|||+.+|
T Consensus       242 ~----------~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l  273 (310)
T 3s95_A          242 R----------YCPPNCPPSFFPITVRCCDLDPEKRPSFVKL  273 (310)
T ss_dssp             H----------TCCTTCCTTHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             c----------cCCCCCCHHHHHHHHHHccCChhhCcCHHHH
Confidence            0          1123455669999999999999999999764

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=6.4e-40  Score=275.43  Aligned_cols=226  Identities=24%  Similarity=0.424  Sum_probs=181.9

Q ss_pred             ccccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccC
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMP  111 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~  111 (263)
                      .+|+..+.||+|+||.||+|...+++.||+|.+........+.+.+|+++++.++||||+++++++.+.+..+++|||++
T Consensus        39 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~  118 (321)
T 2qkw_B           39 NNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYME  118 (321)
T ss_dssp             CCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCT
T ss_pred             hccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCC
Confidence            56999999999999999999987799999999887766677889999999999999999999999999999999999999


Q ss_pred             CCCHhhhhhhCC---CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------
Q 039276          112 HGSLGKCLSTSN---YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------  165 (263)
Q Consensus       112 ~~~L~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------  165 (263)
                      +++|.+++....   ..+++..++.++.|++.||+|||+++++|+||||+||+.+..                       
T Consensus       119 ~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  198 (321)
T 2qkw_B          119 NGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLS  198 (321)
T ss_dssp             TCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCB
T ss_pred             CCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeecccccccccccccccc
Confidence            999999997543   238899999999999999999999999999999999995332                       


Q ss_pred             --ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCC-chhhhHhh-hcCCCchhhhhhhccccccc
Q 039276          166 --TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGE-MTLKHWVN-DLLPNSVMKVVSANLLSRED  229 (263)
Q Consensus       166 --~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  229 (263)
                        ..|++.|+||            |||||||++|||++|+.||......+ .....|.. ...........+...     
T Consensus       199 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  273 (321)
T 2qkw_B          199 TVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNL-----  273 (321)
T ss_dssp             CCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSC-----
T ss_pred             cccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhh-----
Confidence              1368889999            99999999999999999997543222 22222211 111111112221111     


Q ss_pred             ccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          230 EHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       230 ~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                       .......+++++.+++.+||+.||++|||++||
T Consensus       274 -~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~el  306 (321)
T 2qkw_B          274 -ADKIRPESLRKFGDTAVKCLALSSEDRPSMGDV  306 (321)
T ss_dssp             -TTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             -ccccCHHHHHHHHHHHHHHcCCCcccCcCHHHH
Confidence             112356788889999999999999999999864

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.9e-40  Score=278.81  Aligned_cols=214  Identities=17%  Similarity=0.243  Sum_probs=174.1

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      ++|...+.||+|+||.||+|.. .++..+|+|.+... ......+.+|+++++.++||||+++++++.+.+..+++|||+
T Consensus         5 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~   83 (321)
T 1tki_A            5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFI   83 (321)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             hceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeC
Confidence            4699999999999999999994 46889999998755 344566789999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc------------------------c
Q 039276          111 PHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ------------------------T  166 (263)
Q Consensus       111 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~------------------------~  166 (263)
                      ++++|.+++......+++..++.++.|++.||+|||+++++||||||+||+....                        .
T Consensus        84 ~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~  163 (321)
T 1tki_A           84 SGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLL  163 (321)
T ss_dssp             CCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEEE
T ss_pred             CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCccccc
Confidence            9999999998765568999999999999999999999999999999999996531                        2


Q ss_pred             cccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccc
Q 039276          167 LATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT  234 (263)
Q Consensus       167 ~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (263)
                      .||+.|+||            |||||||++|+|++|..||..... ...+.........                .....
T Consensus       164 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-~~~~~~i~~~~~~----------------~~~~~  226 (321)
T 1tki_A          164 FTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN-QQIIENIMNAEYT----------------FDEEA  226 (321)
T ss_dssp             ESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH-HHHHHHHHHTCCC----------------CCHHH
T ss_pred             cCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCH-HHHHHHHHcCCCC----------------CChhh
Confidence            478889999            999999999999999999864211 1111111111000                00011


Q ss_pred             hHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          235 KEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       235 ~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ...+++++.+++.+||..||++|||+.|+
T Consensus       227 ~~~~s~~~~~li~~~L~~dp~~Rpt~~e~  255 (321)
T 1tki_A          227 FKEISIEAMDFVDRLLVKERKSRMTASEA  255 (321)
T ss_dssp             HTTSCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred             hccCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence            23567789999999999999999999764

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=3.2e-40  Score=281.40  Aligned_cols=214  Identities=19%  Similarity=0.249  Sum_probs=173.5

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCCCc------hHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeE
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGG------AFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKA  104 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~------~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~  104 (263)
                      +.|+..+.||+|+||.||+|.. .+++.||+|.+......      ..+.+.+|+.+++.++||||+++++++.+....+
T Consensus        12 ~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~   91 (361)
T 2yab_A           12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVV   91 (361)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred             hceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEE
Confidence            4699999999999999999994 56899999999765321      3567889999999999999999999999999999


Q ss_pred             EEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-------------------
Q 039276          105 LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-------------------  165 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-------------------  165 (263)
                      +||||+++++|.+++..... +++..+..++.|++.||+|||+++++||||||+||+....                   
T Consensus        92 lv~e~~~gg~L~~~l~~~~~-l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~  170 (361)
T 2yab_A           92 LILELVSGGELFDFLAQKES-LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE  170 (361)
T ss_dssp             EEEECCCSCBHHHHHTTCSC-CBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECC
T ss_pred             EEEEcCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcC
Confidence            99999999999999976543 8999999999999999999999999999999999985321                   


Q ss_pred             -------ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccc
Q 039276          166 -------TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLS  226 (263)
Q Consensus       166 -------~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (263)
                             ..||+.|+||            |||||||++|+|++|..||..... ...+.......               
T Consensus       171 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~-~~~~~~i~~~~---------------  234 (361)
T 2yab_A          171 DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK-QETLANITAVS---------------  234 (361)
T ss_dssp             TTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH-HHHHHHHHTTC---------------
T ss_pred             CCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHhcC---------------
Confidence                   2478899999            999999999999999999864211 11111111100               


Q ss_pred             cccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          227 REDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       227 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                       ..........+++++.+++.+||..||++|||+.|+
T Consensus       235 -~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~  270 (361)
T 2yab_A          235 -YDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEA  270 (361)
T ss_dssp             -CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred             -CCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHH
Confidence             000001124566779999999999999999998763

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=4.6e-40  Score=283.35  Aligned_cols=235  Identities=17%  Similarity=0.250  Sum_probs=175.2

Q ss_pred             ccccccccccceeccc--CceEEEEEEe-cCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCe
Q 039276           28 FSGLFLFSESNLISRG--GFGSIYKAKI-QDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDF  102 (263)
Q Consensus        28 ~~~~~~y~~~~~lg~g--~~g~v~~~~~-~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~  102 (263)
                      .....+|+..+.||+|  +||.||+|.. .+++.||+|++....  ....+.+.+|+.+++.++||||+++++++.+.+.
T Consensus        21 ~~~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~  100 (389)
T 3gni_B           21 LPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNE  100 (389)
T ss_dssp             CCCGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred             cCCCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCE
Confidence            4445779999999999  9999999995 469999999998663  2345677889999999999999999999999999


Q ss_pred             eEEEEeccCCCCHhhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc----------------
Q 039276          103 KALILECMPHGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ----------------  165 (263)
Q Consensus       103 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~----------------  165 (263)
                      .++||||+++++|.+++.... ..+++..+..++.|++.||+|||+++++||||||+||+++..                
T Consensus       101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~  180 (389)
T 3gni_B          101 LWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMIS  180 (389)
T ss_dssp             EEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred             EEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence            999999999999999997642 348999999999999999999999999999999999995421                


Q ss_pred             --------------ccccccccCc--------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCc--
Q 039276          166 --------------TLATISYMAP--------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNS--  215 (263)
Q Consensus       166 --------------~~g~~~y~aP--------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~--  215 (263)
                                    ..||+.|+||              |||||||++|||++|+.||............+.. ..+..  
T Consensus       181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~-~~~~~~~  259 (389)
T 3gni_B          181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNG-TVPCLLD  259 (389)
T ss_dssp             TTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-----------
T ss_pred             ccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcC-CCCcccc
Confidence                          1567779999              9999999999999999999754332222111110 00000  


Q ss_pred             --------hh-------------h---hhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          216 --------VM-------------K---VVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       216 --------~~-------------~---~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                              ..             .   ..............+.+..+++++.+|+.+||+.||++|||++|+
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~el  331 (389)
T 3gni_B          260 TSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTL  331 (389)
T ss_dssp             ----------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHH
T ss_pred             ccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHH
Confidence                    00             0   000000000111112345667889999999999999999998764

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=2.5e-40  Score=278.57  Aligned_cols=213  Identities=18%  Similarity=0.315  Sum_probs=173.0

Q ss_pred             cccccccceecccCceEEEEEEec----CCceEEEEEeecC-CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEE
Q 039276           31 LFLFSESNLISRGGFGSIYKAKIQ----DGMEVVVKGFNLQ-YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKAL  105 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~~----~~~~v~vK~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l  105 (263)
                      ..+|+..+.||+|+||.||+|...    .+..||||.+... .....+.+.+|+.+++.++|+||+++++++.+.+..++
T Consensus        48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  127 (325)
T 3kul_A           48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI  127 (325)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred             hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence            367999999999999999999953    3456999999765 33345678899999999999999999999999889999


Q ss_pred             EEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc-------------------
Q 039276          106 ILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT-------------------  166 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~-------------------  166 (263)
                      ||||+++++|.+++......+++..++.++.|++.||+|||+++++||||||+||+.+...                   
T Consensus       128 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~  207 (325)
T 3kul_A          128 VTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDA  207 (325)
T ss_dssp             EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEECC----C
T ss_pred             EeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCcccccccCccc
Confidence            9999999999999977655689999999999999999999999999999999999954321                   


Q ss_pred             -------cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccc
Q 039276          167 -------LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLS  226 (263)
Q Consensus       167 -------~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (263)
                             .+|+.|+||            |||||||++|||++ |+.||......  ...            ..+..    
T Consensus       208 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~~~------------~~~~~----  269 (325)
T 3kul_A          208 AYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR--DVI------------SSVEE----  269 (325)
T ss_dssp             CEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH--HHH------------HHHHT----
T ss_pred             eeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH--HHH------------HHHHc----
Confidence                   235579999            99999999999999 99998642111  000            00000    


Q ss_pred             cccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          227 REDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       227 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                        ..+.+.+..+++++.+++.+||+.||++|||+.+|
T Consensus       270 --~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ei  304 (325)
T 3kul_A          270 --GYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQI  304 (325)
T ss_dssp             --TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             --CCCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHH
Confidence              01122345667789999999999999999999764

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=7.2e-40  Score=275.49  Aligned_cols=213  Identities=20%  Similarity=0.251  Sum_probs=173.0

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCCC-chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYG-GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      ++|+..+.||+|+||.||+|.. .+++.||+|++..... ...+.+.+|+.+++.++|+||+++++++.+.+..+++|||
T Consensus         7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~   86 (323)
T 3tki_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   86 (323)
T ss_dssp             TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEc
Confidence            4699999999999999999994 4689999999976532 2345678899999999999999999999999999999999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-------------------------
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-------------------------  164 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-------------------------  164 (263)
                      +++++|.+++..... +++..+..++.|++.||+|||+++++||||||+||+.+.                         
T Consensus        87 ~~~~~L~~~l~~~~~-~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~  165 (323)
T 3tki_A           87 CSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN  165 (323)
T ss_dssp             CTTEEGGGGSBTTTB-CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBC
T ss_pred             CCCCcHHHHHhhcCC-CCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcccccC
Confidence            999999999976544 899999999999999999999999999999999999532                         


Q ss_pred             cccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccc
Q 039276          165 QTLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEH  231 (263)
Q Consensus       165 ~~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (263)
                      ...||+.|+||             |||||||++|+|++|+.||.........+..+.....                  .
T Consensus       166 ~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~------------------~  227 (323)
T 3tki_A          166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT------------------Y  227 (323)
T ss_dssp             SCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCT------------------T
T ss_pred             CCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccc------------------c
Confidence            23578899999             9999999999999999999754333232222221110                  0


Q ss_pred             ccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          232 FMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       232 ~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ......+++++.+++.+||+.||++|||++|+
T Consensus       228 ~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ei  259 (323)
T 3tki_A          228 LNPWKKIDSAPLALLHKILVENPSARITIPDI  259 (323)
T ss_dssp             STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred             CCccccCCHHHHHHHHHHccCChhhCcCHHHH
Confidence            01124556678999999999999999999764

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=5.6e-40  Score=282.31  Aligned_cols=215  Identities=18%  Similarity=0.204  Sum_probs=176.3

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      +.|+..+.||+|+||.||+|.. .+++.+|+|.+..........+.+|+.+++.++|+||+++++++.+....++||||+
T Consensus        51 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~  130 (387)
T 1kob_A           51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL  130 (387)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcC
Confidence            5699999999999999999994 568999999998765555667889999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc------------------------cc
Q 039276          111 PHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI------------------------QT  166 (263)
Q Consensus       111 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~------------------------~~  166 (263)
                      ++++|.+++......+++..++.++.|++.||+|||+++++||||||+||+.+.                        ..
T Consensus       131 ~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~~  210 (387)
T 1kob_A          131 SGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVT  210 (387)
T ss_dssp             CCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEEEE
T ss_pred             CCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCCCcceeee
Confidence            999999999876656899999999999999999999999999999999999642                        12


Q ss_pred             cccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccc
Q 039276          167 LATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT  234 (263)
Q Consensus       167 ~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (263)
                      .||+.|+||            |||||||++|||++|+.||..... ...+......                ........
T Consensus       211 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~-~~~~~~i~~~----------------~~~~~~~~  273 (387)
T 1kob_A          211 TATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD-LETLQNVKRC----------------DWEFDEDA  273 (387)
T ss_dssp             CSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH-HHHHHHHHHC----------------CCCCCSST
T ss_pred             ccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH-HHHHHHHHhC----------------CCCCCccc
Confidence            478899999            999999999999999999864211 0111111110                00000112


Q ss_pred             hHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          235 KEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       235 ~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ...+++++.+++.+||+.||++|||+.|+
T Consensus       274 ~~~~s~~~~~li~~~L~~dP~~Rpt~~el  302 (387)
T 1kob_A          274 FSSVSPEAKDFIKNLLQKEPRKRLTVHDA  302 (387)
T ss_dssp             TTTSCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred             cccCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence            34567789999999999999999999764

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=3.1e-40  Score=278.89  Aligned_cols=209  Identities=20%  Similarity=0.272  Sum_probs=171.7

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecC---CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQ---YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      ++|...+.||+|+||.||+|.. .+++.||+|++...   .......+.+|+.+++.++||||+++++++.+.+..++||
T Consensus         9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~   88 (336)
T 3h4j_B            9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI   88 (336)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            5699999999999999999994 66899999999754   2233457889999999999999999999999999999999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc----------------------
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ----------------------  165 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~----------------------  165 (263)
                      ||+ +|+|.+++..... +++..+..++.|++.||+|||+++++||||||+||+.+..                      
T Consensus        89 E~~-~g~l~~~l~~~~~-l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~~~~  166 (336)
T 3h4j_B           89 EYA-GGELFDYIVEKKR-MTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKT  166 (336)
T ss_dssp             CCC-CEEHHHHHHHHCS-CCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBTTCC
T ss_pred             ECC-CCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCccccc
Confidence            999 6799998876554 8999999999999999999999999999999999995432                      


Q ss_pred             ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccc
Q 039276          166 TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHF  232 (263)
Q Consensus       166 ~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (263)
                      ..||+.|+||             |||||||++|+|++|+.||........              ...+       .....
T Consensus       167 ~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~--------------~~~i-------~~~~~  225 (336)
T 3h4j_B          167 SCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL--------------FKKV-------NSCVY  225 (336)
T ss_dssp             CTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC--------------BCCC-------CSSCC
T ss_pred             ccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH--------------HHHH-------HcCCC
Confidence            2578999999             999999999999999999864211100              0000       01111


Q ss_pred             cchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          233 MTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       233 ~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ..+..+++++.+++.+||+.||.+|||++||
T Consensus       226 ~~p~~~s~~~~~li~~~L~~dP~~Rpt~~ei  256 (336)
T 3h4j_B          226 VMPDFLSPGAQSLIRRMIVADPMQRITIQEI  256 (336)
T ss_dssp             CCCTTSCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred             CCcccCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence            2244567779999999999999999999864

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=8.2e-40  Score=279.23  Aligned_cols=214  Identities=17%  Similarity=0.251  Sum_probs=173.6

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCCC--chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEe
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYG--GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~--~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      ++|+..+.||+|+||.||+|.. .+++.||+|++.....  ...+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus        29 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e  108 (362)
T 2bdw_A           29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD  108 (362)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             cCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence            4699999999999999999984 5689999999986532  345678899999999999999999999999999999999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------  165 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------  165 (263)
                      |+++++|.+++..... +++..+..++.|++.||+|||+++++||||||+||+....                       
T Consensus       109 ~~~gg~L~~~l~~~~~-~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~~  187 (362)
T 2bdw_A          109 LVTGGELFEDIVAREF-YSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW  187 (362)
T ss_dssp             CCCSCBHHHHHTTCSC-CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCSC
T ss_pred             cCCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCccc
Confidence            9999999999876544 8999999999999999999999999999999999996421                       


Q ss_pred             --ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccc
Q 039276          166 --TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEH  231 (263)
Q Consensus       166 --~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (263)
                        ..||+.|+||            |||||||++|+|++|+.||..... ...+.......                ....
T Consensus       188 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~-~~~~~~i~~~~----------------~~~~  250 (362)
T 2bdw_A          188 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ-HRLYAQIKAGA----------------YDYP  250 (362)
T ss_dssp             CCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHTC----------------CCCC
T ss_pred             ccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-HHHHHHHHhCC----------------CCCC
Confidence              2578899999            999999999999999999864211 01111111100                0000


Q ss_pred             ccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          232 FMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       232 ~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .+....+++++.+++.+||+.||++|||+.|+
T Consensus       251 ~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~  282 (362)
T 2bdw_A          251 SPEWDTVTPEAKSLIDSMLTVNPKKRITADQA  282 (362)
T ss_dssp             TTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             cccccCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence            11124567789999999999999999998763

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=1e-39  Score=274.65  Aligned_cols=226  Identities=28%  Similarity=0.474  Sum_probs=179.5

Q ss_pred             ccccccceecccCceEEEEEEecCCceEEEEEeecCCC-chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYG-GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      .+|+..+.||+|+||.||+|...+++.||+|++..... .....+.+|+++++.++|+||+++++++.+.+..+++|||+
T Consensus        30 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~  109 (326)
T 3uim_A           30 DNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYM  109 (326)
T ss_dssp             TSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEEEECC
T ss_pred             hccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCCceEEEEEec
Confidence            45999999999999999999977799999999976532 23346889999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhhCCC---cccHHHHHHHHHHHHHHHHHhccC---CccccccCCCccccccc-------------------
Q 039276          111 PHGSLGKCLSTSNY---ILDFFQRLHIMIDVASAVEYLHFG---HSTHLLLKEDQSLTQIQ-------------------  165 (263)
Q Consensus       111 ~~~~L~~~l~~~~~---~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlk~~nil~~~~-------------------  165 (263)
                      ++++|.+++.....   .+++..+..++.|++.||+|||++   +++|+||||+||+.+..                   
T Consensus       110 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  189 (326)
T 3uim_A          110 ANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT  189 (326)
T ss_dssp             TTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECCSSSS
T ss_pred             cCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCccccccCcccc
Confidence            99999999976432   288999999999999999999999   99999999999995432                   


Q ss_pred             -----ccccccccCc------------chhhHHHHHHHHHhCCCCCccc---cCCCchhhhHhhhcCCC-chhhhhhhcc
Q 039276          166 -----TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKF---FHGEMTLKHWVNDLLPN-SVMKVVSANL  224 (263)
Q Consensus       166 -----~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~  224 (263)
                           ..||+.|+||            |||||||++|+|++|+.||...   .........|....... ......+...
T Consensus       190 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (326)
T 3uim_A          190 HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDL  269 (326)
T ss_dssp             CEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTC
T ss_pred             cccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhh
Confidence                 2378999999            9999999999999999999642   22233344444333222 2222222211


Q ss_pred             cccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          225 LSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       225 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .      .......++++.+++.+||+.||++|||++||
T Consensus       270 ~------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el  302 (326)
T 3uim_A          270 Q------GNYKDEEVEQLIQVALLCTQSSPMERPKMSEV  302 (326)
T ss_dssp             T------TSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHH
T ss_pred             c------cccCHHHHHHHHHHHHHHhCcCCccCCCHHHH
Confidence            1      12356778889999999999999999999864

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=1.1e-39  Score=274.70  Aligned_cols=214  Identities=18%  Similarity=0.240  Sum_probs=172.7

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCCC------chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeE
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYG------GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKA  104 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~------~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~  104 (263)
                      ..|...+.||+|+||.||+|.. .+++.||+|.+.....      ...+.+.+|+.+++.++||||+++++++.+....+
T Consensus        11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   90 (326)
T 2y0a_A           11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   90 (326)
T ss_dssp             HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            4699999999999999999994 4689999999976532      23577889999999999999999999999999999


Q ss_pred             EEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-------------------
Q 039276          105 LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-------------------  165 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-------------------  165 (263)
                      +||||+++++|.+++.... .+++..+..++.|++.||+|||+++++|+||||+||+....                   
T Consensus        91 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~  169 (326)
T 2y0a_A           91 LILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID  169 (326)
T ss_dssp             EEEECCCSCBHHHHHTTSS-CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECC
T ss_pred             EEEEcCCCCCHHHHHHhcC-CcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECC
Confidence            9999999999999997654 38999999999999999999999999999999999985321                   


Q ss_pred             -------ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccc
Q 039276          166 -------TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLS  226 (263)
Q Consensus       166 -------~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (263)
                             ..||+.|+||            |||||||++|+|++|+.||...... ..+........              
T Consensus       170 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~~~~~~~--------------  234 (326)
T 2y0a_A          170 FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ-ETLANVSAVNY--------------  234 (326)
T ss_dssp             TTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH-HHHHHHHHTCC--------------
T ss_pred             CCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH-HHHHHHHhcCC--------------
Confidence                   2478889999            9999999999999999998632110 11111110000              


Q ss_pred             cccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          227 REDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       227 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                        .........+++++.+++.+||+.||++|||+.|+
T Consensus       235 --~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~  269 (326)
T 2y0a_A          235 --EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDS  269 (326)
T ss_dssp             --CCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             --CcCccccccCCHHHHHHHHHHccCChhhCCCHHHH
Confidence              00001123556779999999999999999999764

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=1.4e-39  Score=266.59  Aligned_cols=212  Identities=21%  Similarity=0.298  Sum_probs=173.6

Q ss_pred             cccccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           31 LFLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      ..+|+..+.||+|+||.||+|...++..||+|++.... ...+.+.+|+++++.++||||+++++++.+.+..+++|||+
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   87 (269)
T 4hcu_A            9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM   87 (269)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred             hhhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence            35699999999999999999998778999999998653 23467889999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc------------------------c
Q 039276          111 PHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ------------------------T  166 (263)
Q Consensus       111 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~------------------------~  166 (263)
                      ++++|.+++......+++..++.++.|++.||+|||+++++|+||||+||+.+..                        .
T Consensus        88 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  167 (269)
T 4hcu_A           88 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGT  167 (269)
T ss_dssp             TTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTST
T ss_pred             CCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEeccccccccccccccccccCc
Confidence            9999999998766668999999999999999999999999999999999995432                        1


Q ss_pred             cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccccc
Q 039276          167 LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFM  233 (263)
Q Consensus       167 ~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (263)
                      .+++.|+||            ||||||+++++|++ |+.||...... ......             ...      .+..
T Consensus       168 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~-~~~~~~-------------~~~------~~~~  227 (269)
T 4hcu_A          168 KFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS-EVVEDI-------------STG------FRLY  227 (269)
T ss_dssp             TCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-HHHHHH-------------HTT------CCCC
T ss_pred             ccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH-HHHHHH-------------hcC------ccCC
Confidence            345679999            99999999999999 99998642111 001000             000      0111


Q ss_pred             chHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          234 TKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       234 ~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .+..+++++.+++.+||+.||++|||++|+
T Consensus       228 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~l  257 (269)
T 4hcu_A          228 KPRLASTHVYQIMNHCWRERPEDRPAFSRL  257 (269)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             CCCcCCHHHHHHHHHHccCCcccCcCHHHH
Confidence            233456679999999999999999999764

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=7.5e-40  Score=286.09  Aligned_cols=214  Identities=18%  Similarity=0.212  Sum_probs=172.4

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCCC--chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEe
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYG--GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~--~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      ++|+..+.||+|+||.||+|. ..+++.+|+|++.....  ...+.+.+|+++++.++||||+++++++.+.+..++|||
T Consensus        11 ~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E   90 (444)
T 3soa_A           11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFD   90 (444)
T ss_dssp             HHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEEC
T ss_pred             CCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEE
Confidence            469999999999999999998 45689999999986642  345668899999999999999999999999999999999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc------------------------
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI------------------------  164 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~------------------------  164 (263)
                      |+++|+|.+++..... +++..+..++.|++.||+|||+++++||||||+||+...                        
T Consensus        91 ~~~gg~L~~~i~~~~~-~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~~  169 (444)
T 3soa_A           91 LVTGGELFEDIVAREY-YSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQA  169 (444)
T ss_dssp             CCBCCBHHHHHHHCSC-CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCCB
T ss_pred             eCCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCce
Confidence            9999999999987654 899999999999999999999999999999999999642                        


Q ss_pred             --cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccc
Q 039276          165 --QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDE  230 (263)
Q Consensus       165 --~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (263)
                        ...||+.|+||            |||||||++|+|++|..||..... ...+......                ....
T Consensus       170 ~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~-~~~~~~i~~~----------------~~~~  232 (444)
T 3soa_A          170 WFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ-HRLYQQIKAG----------------AYDF  232 (444)
T ss_dssp             CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHT----------------CCCC
T ss_pred             eecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH-HHHHHHHHhC----------------CCCC
Confidence              12578999999            999999999999999999853210 0111111110                0000


Q ss_pred             cccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          231 HFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       231 ~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ..+....+++++.+++.+||+.||++|||+.|+
T Consensus       233 ~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~  265 (444)
T 3soa_A          233 PSPEWDTVTPEAKDLINKMLTINPSKRITAAEA  265 (444)
T ss_dssp             CTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred             CccccccCCHHHHHHHHHHcCCChhHCCCHHHH
Confidence            111224567789999999999999999999763

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=1.3e-39  Score=272.45  Aligned_cols=230  Identities=21%  Similarity=0.242  Sum_probs=174.0

Q ss_pred             ccccccceecccCceEEEEEEecCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      ++|+..+.||+|+||.||+|...+++.||+|++....  ......+.+|+++++.++||||+++++++.+....++||||
T Consensus        21 ~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~  100 (311)
T 3niz_A           21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEF  100 (311)
T ss_dssp             CEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEEC
T ss_pred             hhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcC
Confidence            4699999999999999999998779999999997552  23456788999999999999999999999999999999999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------c
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------T  166 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------~  166 (263)
                      +++ +|.+++......+++..++.++.|++.||+|||+++++||||||+||+.+..                       .
T Consensus       101 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~  179 (311)
T 3niz_A          101 MEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHE  179 (311)
T ss_dssp             CSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC---CC
T ss_pred             CCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecCCCcccccCC
Confidence            985 8888887766668999999999999999999999999999999999995322                       2


Q ss_pred             cccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCC---Cchhhhhhhcc-----c
Q 039276          167 LATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLP---NSVMKVVSANL-----L  225 (263)
Q Consensus       167 ~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-----~  225 (263)
                      .||+.|+||             |||||||++|+|++|+.||......+ .+.........   ...........     .
T Consensus       180 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (311)
T 3niz_A          180 VVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD-QLPKIFSILGTPNPREWPQVQELPLWKQRTF  258 (311)
T ss_dssp             CCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT-HHHHHHHHHCCCCTTTSGGGTTSHHHHSCCC
T ss_pred             cccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHHCCCChHHhhhhhccchhhhccc
Confidence            468889999             99999999999999999997543222 22222211111   11100000000     0


Q ss_pred             c--cccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          226 S--REDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       226 ~--~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .  ...........+++++.+++.+||+.||++|||++|+
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el  298 (311)
T 3niz_A          259 QVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDA  298 (311)
T ss_dssp             CCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred             ccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHH
Confidence            0  0000000123456679999999999999999999864

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=7.4e-40  Score=268.07  Aligned_cols=212  Identities=20%  Similarity=0.335  Sum_probs=173.5

Q ss_pred             ccccccceecccCceEEEEEEecCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecC--CeeEEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKD--DFKALIL  107 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~--~~~~lv~  107 (263)
                      .+|...+.||+|+||.||+|... +..+|+|++....  ....+.+.+|+.+++.++||||+++++++.+.  ...+++|
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   88 (271)
T 3kmu_A           10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT   88 (271)
T ss_dssp             GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred             HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence            46999999999999999999976 8899999998663  23456788999999999999999999999876  7889999


Q ss_pred             eccCCCCHhhhhhhCCC-cccHHHHHHHHHHHHHHHHHhccCC--ccccccCCCccccccc------------------c
Q 039276          108 ECMPHGSLGKCLSTSNY-ILDFFQRLHIMIDVASAVEYLHFGH--STHLLLKEDQSLTQIQ------------------T  166 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~lH~~~--i~h~dlk~~nil~~~~------------------~  166 (263)
                      ||+++++|.+++..... .+++..++.++.|++.||+|||+++  ++|+||||+||+.+..                  .
T Consensus        89 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~~~~  168 (271)
T 3kmu_A           89 HWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGR  168 (271)
T ss_dssp             ECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSCTTC
T ss_pred             cccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeeecccCc
Confidence            99999999999987543 3899999999999999999999999  9999999999995432                  2


Q ss_pred             cccccccCc---------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccc
Q 039276          167 LATISYMAP---------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEH  231 (263)
Q Consensus       167 ~g~~~y~aP---------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (263)
                      .||+.|+||               |||||||++|||++|+.||......+... ..            ..      ...+
T Consensus       169 ~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~-~~------------~~------~~~~  229 (271)
T 3kmu_A          169 MYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGM-KV------------AL------EGLR  229 (271)
T ss_dssp             BSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHH-HH------------HH------SCCC
T ss_pred             cCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHH-HH------------Hh------cCCC
Confidence            568899999               99999999999999999986431111100 00            00      0011


Q ss_pred             ccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          232 FMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       232 ~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ...+..+++++.+++.+||+.||++|||++||
T Consensus       230 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~i  261 (271)
T 3kmu_A          230 PTIPPGISPHVSKLMKICMNEDPAKRPKFDMI  261 (271)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence            12234567779999999999999999999764

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=100.00  E-value=2.2e-39  Score=271.40  Aligned_cols=228  Identities=18%  Similarity=0.216  Sum_probs=173.5

Q ss_pred             cccccc-ceecccCceEEEEEE-ecCCceEEEEEeecCCCchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCeeEEEEe
Q 039276           32 FLFSES-NLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        32 ~~y~~~-~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      ..|... +.||+|+||.||+|. ..+++.||+|++..........+.+|++++.++ +|+||+++++++.+.+..++|||
T Consensus        12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e   91 (316)
T 2ac3_A           12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE   91 (316)
T ss_dssp             TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence            457774 789999999999999 556899999999877666677889999999885 79999999999999999999999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------  165 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------  165 (263)
                      |+++++|.+++..... +++..+..++.|++.||+|||+++++||||||+||+....                       
T Consensus        92 ~~~~~~L~~~l~~~~~-~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~  170 (316)
T 2ac3_A           92 KMRGGSILSHIHKRRH-FNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDC  170 (316)
T ss_dssp             CCTTCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC--------
T ss_pred             cCCCCcHHHHHhccCC-CCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCcc
Confidence            9999999999987544 8999999999999999999999999999999999995421                       


Q ss_pred             ----------ccccccccCc-----------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCc-hh
Q 039276          166 ----------TLATISYMAP-----------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNS-VM  217 (263)
Q Consensus       166 ----------~~g~~~y~aP-----------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~-~~  217 (263)
                                ..||+.|+||                 |||||||++|||++|+.||......+..+..   ...... ..
T Consensus       171 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~---~~~~~~~~~  247 (316)
T 2ac3_A          171 SPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDR---GEACPACQN  247 (316)
T ss_dssp             -----------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC-------CCHHHHH
T ss_pred             ccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccc---cccchhHHH
Confidence                      1278889998                 9999999999999999999754322211100   000000 00


Q ss_pred             hhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          218 KVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .+..................+++++.+++.+||+.||++|||++|+
T Consensus       248 ~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~  293 (316)
T 2ac3_A          248 MLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQV  293 (316)
T ss_dssp             HHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred             HHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHH
Confidence            0000000000000000113466789999999999999999999764

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=1.1e-39  Score=272.86  Aligned_cols=212  Identities=24%  Similarity=0.311  Sum_probs=171.6

Q ss_pred             ccccccceecccCceEEEEEEecCCceEEEEEeecCCC--chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYG--GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~--~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      .+|+..+.||+|+||.||+|... +..||+|++.....  ...+.+.+|+++++.++|+||+++++++.+.+..++||||
T Consensus        37 ~~y~i~~~lG~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~  115 (309)
T 3p86_A           37 CDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEY  115 (309)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEET-TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEEC
T ss_pred             hHceeeeEeecCCCeEEEEEEEC-CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEec
Confidence            46999999999999999999875 88999999976532  3456788999999999999999999999999999999999


Q ss_pred             cCCCCHhhhhhhCCC--cccHHHHHHHHHHHHHHHHHhccCC--ccccccCCCccccccc--------------------
Q 039276          110 MPHGSLGKCLSTSNY--ILDFFQRLHIMIDVASAVEYLHFGH--STHLLLKEDQSLTQIQ--------------------  165 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~~--i~h~dlk~~nil~~~~--------------------  165 (263)
                      +++++|.+++.....  .+++..++.++.|++.||+|||+++  ++||||||+||+.+..                    
T Consensus       116 ~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~  195 (309)
T 3p86_A          116 LSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLS  195 (309)
T ss_dssp             CTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC-----------
T ss_pred             CCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCccccccccc
Confidence            999999999976542  2888999999999999999999999  9999999999995432                    


Q ss_pred             ---ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccc
Q 039276          166 ---TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDE  230 (263)
Q Consensus       166 ---~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (263)
                         ..||+.|+||            |||||||++|||++|+.||......+  ....            +.     ....
T Consensus       196 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~--~~~~------------~~-----~~~~  256 (309)
T 3p86_A          196 SKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ--VVAA------------VG-----FKCK  256 (309)
T ss_dssp             ------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHH--HHHH------------HH-----HSCC
T ss_pred             cccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHH------------HH-----hcCC
Confidence               3578899999            99999999999999999986431110  0000            00     0011


Q ss_pred             cccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          231 HFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       231 ~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +...+..+++++.+++.+||+.||++|||+++|
T Consensus       257 ~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l  289 (309)
T 3p86_A          257 RLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATI  289 (309)
T ss_dssp             CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             CCCCCccCCHHHHHHHHHHccCChhhCcCHHHH
Confidence            112345667789999999999999999999764

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=9.4e-40  Score=276.15  Aligned_cols=205  Identities=19%  Similarity=0.211  Sum_probs=169.3

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecC---CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQ---YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      .+|+..+.||+|+||.||++.. .+++.||+|++...   .......+.+|+.+++.++||||+++++++.+.+..++||
T Consensus         5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   84 (337)
T 1o6l_A            5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM   84 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence            4699999999999999999994 46899999999764   2345567888999999999999999999999999999999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-----------------------
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-----------------------  164 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-----------------------  164 (263)
                      ||+++|+|..++..... +++..+..++.|++.||+|||+++++||||||+||+++.                       
T Consensus        85 E~~~gg~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~  163 (337)
T 1o6l_A           85 EYANGGELFFHLSRERV-FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMK  163 (337)
T ss_dssp             ECCTTCBHHHHHHHHSC-CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCBC
T ss_pred             eCCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCCCccc
Confidence            99999999999976544 899999999999999999999999999999999999532                       


Q ss_pred             cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccc
Q 039276          165 QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHF  232 (263)
Q Consensus       165 ~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (263)
                      ...||+.|+||            |||||||++|||++|+.||..... .......            ...        ..
T Consensus       164 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-~~~~~~i------------~~~--------~~  222 (337)
T 1o6l_A          164 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELI------------LME--------EI  222 (337)
T ss_dssp             CCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHH------------HHC--------CC
T ss_pred             ccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH-HHHHHHH------------HcC--------CC
Confidence            12578999999            999999999999999999864210 0001100            000        01


Q ss_pred             cchHHHHHHHHHhhccccccCcCCCC
Q 039276          233 MTKEQCMSFVFNLAMECTVESPNQRI  258 (263)
Q Consensus       233 ~~~~~~~~~l~~l~~~cl~~~p~~Rp  258 (263)
                      ..+..+++++.+++.+||+.||++||
T Consensus       223 ~~p~~~s~~~~~li~~lL~~dP~~R~  248 (337)
T 1o6l_A          223 RFPRTLSPEAKSLLAGLLKKDPKQRL  248 (337)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSTTTST
T ss_pred             CCCCCCCHHHHHHHHHHhhcCHHHhc
Confidence            12345677899999999999999999

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=1.2e-39  Score=279.33  Aligned_cols=214  Identities=19%  Similarity=0.243  Sum_probs=169.0

Q ss_pred             cccccceecccCceEEEEEE-ecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccC
Q 039276           33 LFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMP  111 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~  111 (263)
                      .+...+.||+|+||.||+|. ..+++.||+|++........+.+.+|+++++.++|+||+++++++.+.+..++||||++
T Consensus        90 ~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~  169 (373)
T 2x4f_A           90 TVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVD  169 (373)
T ss_dssp             EEEEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred             eeecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCC
Confidence            34557789999999999998 45689999999987765667788999999999999999999999999999999999999


Q ss_pred             CCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccc--c----------------------ccc
Q 039276          112 HGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQ--I----------------------QTL  167 (263)
Q Consensus       112 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~--~----------------------~~~  167 (263)
                      +++|.+++......+++..+..++.|++.||+|||+++++||||||+||+..  .                      ...
T Consensus       170 ~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  249 (373)
T 2x4f_A          170 GGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF  249 (373)
T ss_dssp             TCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCCCC
T ss_pred             CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcccccccc
Confidence            9999999877655689999999999999999999999999999999999952  1                      124


Q ss_pred             ccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccch
Q 039276          168 ATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTK  235 (263)
Q Consensus       168 g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (263)
                      ||+.|+||            |||||||++|||++|+.||..... ...+.........                ......
T Consensus       250 gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~-~~~~~~i~~~~~~----------------~~~~~~  312 (373)
T 2x4f_A          250 GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND-AETLNNILACRWD----------------LEDEEF  312 (373)
T ss_dssp             SSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSH-HHHHHHHHHTCCC----------------SCSGGG
T ss_pred             CCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHhccCC----------------CChhhh
Confidence            78899999            999999999999999999864211 1111111111000                000112


Q ss_pred             HHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          236 EQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       236 ~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ..+++++.+++.+||+.||++|||+.|+
T Consensus       313 ~~~~~~~~~li~~~L~~dp~~Rps~~e~  340 (373)
T 2x4f_A          313 QDISEEAKEFISKLLIKEKSWRISASEA  340 (373)
T ss_dssp             TTSCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred             ccCCHHHHHHHHHHcCCChhhCCCHHHH
Confidence            4567789999999999999999998764

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=1.7e-39  Score=277.19  Aligned_cols=216  Identities=19%  Similarity=0.177  Sum_probs=170.6

Q ss_pred             cccccccceecccCceEEEEEEe-cCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           31 LFLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      ..+|+..+.||+|+||.||++.. .+++.||+|++.... ...+.+.+|+.+++.++||||+++++++.+....++||||
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~   97 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY   97 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence            45699999999999999999994 468999999997653 2346678999999999999999999999999999999999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc------------------------
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ------------------------  165 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~------------------------  165 (263)
                      +++++|.+++...+. +++..++.++.|++.||+|||+++++||||||+||+.+..                        
T Consensus        98 ~~~~~L~~~l~~~~~-~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~~~  176 (361)
T 3uc3_A           98 ASGGELYERICNAGR-FSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS  176 (361)
T ss_dssp             CCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC-----------
T ss_pred             CCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCccccccccCCCCC
Confidence            999999999976554 8999999999999999999999999999999999996422                        


Q ss_pred             ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccc
Q 039276          166 TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHF  232 (263)
Q Consensus       166 ~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (263)
                      ..||+.|+||             |||||||++|+|++|+.||.......... .....        +....      ...
T Consensus       177 ~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~-~~~~~--------~~~~~------~~~  241 (361)
T 3uc3_A          177 TVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYR-KTIQR--------ILSVK------YSI  241 (361)
T ss_dssp             ----CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHH-HHHHH--------HHTTC------CCC
T ss_pred             CcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHH-HHHHH--------HhcCC------CCC
Confidence            2478899999             99999999999999999997532222111 11110        00000      011


Q ss_pred             cchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          233 MTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       233 ~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +....+++++.+++.+||+.||++|||+.|+
T Consensus       242 ~~~~~~s~~~~~li~~~L~~dP~~Rps~~el  272 (361)
T 3uc3_A          242 PDDIRISPECCHLISRIFVADPATRISIPEI  272 (361)
T ss_dssp             CTTSCCCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred             CCcCCCCHHHHHHHHHHccCChhHCcCHHHH
Confidence            1122456679999999999999999999764

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=2.4e-39  Score=268.38  Aligned_cols=231  Identities=19%  Similarity=0.205  Sum_probs=174.3

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEe
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      ++|+..+.||+|+||.||+|.. .+++.||+|++....  ......+.+|+.+++.++|+||+++++++.+.+..++|||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   81 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence            3599999999999999999994 568999999997653  3345678899999999999999999999999999999999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------  165 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------  165 (263)
                      |+++ ++.+++......+++..++.++.|++.||+|||+++++||||||+||+.+..                       
T Consensus        82 ~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  160 (292)
T 3o0g_A           82 FCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSA  160 (292)
T ss_dssp             CCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCCCS
T ss_pred             cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCCccccccC
Confidence            9976 6766666655559999999999999999999999999999999999995432                       


Q ss_pred             ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhc---------
Q 039276          166 TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSAN---------  223 (263)
Q Consensus       166 ~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------  223 (263)
                      ..||+.|+||             |||||||+++||++|..||.........+...................         
T Consensus       161 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  240 (292)
T 3o0g_A          161 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYP  240 (292)
T ss_dssp             CCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCC
T ss_pred             CccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccc
Confidence            2468889999             999999999999999888654332223333322211111110000000         


Q ss_pred             ccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          224 LLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ..............+++++.+++.+||+.||++|||++|+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~  280 (292)
T 3o0g_A          241 MYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEA  280 (292)
T ss_dssp             CCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             cccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHH
Confidence            0000001111224567789999999999999999999864

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=1.9e-39  Score=268.57  Aligned_cols=230  Identities=20%  Similarity=0.224  Sum_probs=173.8

Q ss_pred             ccccccceecccCceEEEEEEecCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      ++|+..+.||+|+||.||+|...+++.||+|++....  ......+.+|+++++.++||||+++++++.+.+..+++||+
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence            3589999999999999999998779999999997653  22346788999999999999999999999999999999999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------c
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------T  166 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------~  166 (263)
                      +++ +|.+++......+++..+..++.|++.||+|||+++++||||||+||+.+..                       .
T Consensus        82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~  160 (288)
T 1ob3_A           82 LDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHE  160 (288)
T ss_dssp             CSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--------
T ss_pred             cCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCccccccccc
Confidence            976 9999988765568999999999999999999999999999999999995432                       2


Q ss_pred             cccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCC---chhhhh-----hhccc
Q 039276          167 LATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPN---SVMKVV-----SANLL  225 (263)
Q Consensus       167 ~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~---~~~~~~-----~~~~~  225 (263)
                      .||+.|+||             |||||||++|||++|+.||...... ..+..........   ......     +....
T Consensus       161 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (288)
T 1ob3_A          161 IVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA-DQLMRIFRILGTPNSKNWPNVTELPKYDPNFT  239 (288)
T ss_dssp             -CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCC
T ss_pred             cccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHHCCCChhhchhhhcccccccccc
Confidence            468889999             9999999999999999999653211 1111111111100   000000     00000


Q ss_pred             c-cccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          226 S-REDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       226 ~-~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      . ...........+++++.+++.+||+.||++|||++|+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~  278 (288)
T 1ob3_A          240 VYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQA  278 (288)
T ss_dssp             CCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred             cccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHH
Confidence            0 0000001123467789999999999999999999764

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=5.3e-40  Score=279.37  Aligned_cols=214  Identities=18%  Similarity=0.263  Sum_probs=171.5

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecC-----CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEE
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQ-----YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKAL  105 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~-----~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l  105 (263)
                      +.|+..+.||+|+||.||+|. ..+++.||+|++...     .....+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus        24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l  103 (351)
T 3c0i_A           24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM  103 (351)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence            469999999999999999998 456899999999643     12246778899999999999999999999999999999


Q ss_pred             EEeccCCCCHhhhhhhC---CCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc------------------
Q 039276          106 ILECMPHGSLGKCLSTS---NYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI------------------  164 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~------------------  164 (263)
                      ||||+++++|.+++...   ...+++..++.++.|++.||+|||+++++||||||+||+...                  
T Consensus       104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~  183 (351)
T 3c0i_A          104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL  183 (351)
T ss_dssp             EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEEC
T ss_pred             EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcceeEe
Confidence            99999999998877643   223789999999999999999999999999999999999532                  


Q ss_pred             --------cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcc
Q 039276          165 --------QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANL  224 (263)
Q Consensus       165 --------~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (263)
                              ...||+.|+||            |||||||++|+|++|+.||....  ...+......            ..
T Consensus       184 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~--~~~~~~i~~~------------~~  249 (351)
T 3c0i_A          184 GESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK--ERLFEGIIKG------------KY  249 (351)
T ss_dssp             CTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH--HHHHHHHHHT------------CC
T ss_pred             cCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH--HHHHHHHHcC------------CC
Confidence                    12478899999            99999999999999999986421  1111111110            00


Q ss_pred             cccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          225 LSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       225 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .    ........+++++.+++.+||+.||++|||+.|+
T Consensus       250 ~----~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~  284 (351)
T 3c0i_A          250 K----MNPRQWSHISESAKDLVRRMLMLDPAERITVYEA  284 (351)
T ss_dssp             C----CCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred             C----CCccccccCCHHHHHHHHHHCCCChhHCcCHHHH
Confidence            0    0001123456779999999999999999998763

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=2.8e-39  Score=271.70  Aligned_cols=211  Identities=23%  Similarity=0.289  Sum_probs=173.2

Q ss_pred             cccccceecccCceEEEEEEec-CCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccC
Q 039276           33 LFSESNLISRGGFGSIYKAKIQ-DGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMP  111 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~~-~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~  111 (263)
                      .|+..+.||+|+||.||+|... +|+.||||++........+.+.+|+.+++.++|+||+++++++...+..+++|||++
T Consensus        46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  125 (321)
T 2c30_A           46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQ  125 (321)
T ss_dssp             HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCC
T ss_pred             hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCC
Confidence            4777889999999999999954 699999999987766677788999999999999999999999999999999999999


Q ss_pred             CCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-----------------------cccc
Q 039276          112 HGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-----------------------QTLA  168 (263)
Q Consensus       112 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-----------------------~~~g  168 (263)
                      +++|.+++...  .+++..+..++.|++.||+|||+++++||||||+||+.+.                       ...|
T Consensus       126 ~~~L~~~l~~~--~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g  203 (321)
T 2c30_A          126 GGALTDIVSQV--RLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVG  203 (321)
T ss_dssp             SCBHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCS
T ss_pred             CCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCccccccccC
Confidence            99999998753  3899999999999999999999999999999999999542                       1257


Q ss_pred             cccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchH
Q 039276          169 TISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKE  236 (263)
Q Consensus       169 ~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (263)
                      |+.|+||            |||||||+++||++|+.||...... ........ .                .........
T Consensus       204 t~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~-~~~~~~~~-~----------------~~~~~~~~~  265 (321)
T 2c30_A          204 TPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPV-QAMKRLRD-S----------------PPPKLKNSH  265 (321)
T ss_dssp             CGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-HHHHHHHH-S----------------SCCCCTTGG
T ss_pred             CccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHhc-C----------------CCCCcCccc
Confidence            8899999            9999999999999999998642110 00110100 0                000111234


Q ss_pred             HHHHHHHHhhccccccCcCCCCCccCC
Q 039276          237 QCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       237 ~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .+++++.+++.+||+.||++|||++||
T Consensus       266 ~~~~~l~~li~~~l~~dp~~Rps~~el  292 (321)
T 2c30_A          266 KVSPVLRDFLERMLVRDPQERATAQEL  292 (321)
T ss_dssp             GSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred             cCCHHHHHHHHHHccCChhhCcCHHHH
Confidence            556779999999999999999999764

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=1.4e-39  Score=270.14  Aligned_cols=228  Identities=20%  Similarity=0.329  Sum_probs=176.0

Q ss_pred             ccccccceecccCceEEEEEEe-----cCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeec--CCeeE
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-----QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSK--DDFKA  104 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-----~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~  104 (263)
                      .+|+..+.||+|+||.||+|++     .+++.||+|++........+.+.+|+++++.++|+||+++++++..  ....+
T Consensus        10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   89 (295)
T 3ugc_A           10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK   89 (295)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCE
T ss_pred             HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceE
Confidence            4699999999999999999984     2588999999987766667788999999999999999999999854  35689


Q ss_pred             EEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-------------------
Q 039276          105 LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-------------------  165 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-------------------  165 (263)
                      +||||+++++|.+++......+++..++.++.|++.||+|||+++++|+||||+||+.+..                   
T Consensus        90 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  169 (295)
T 3ugc_A           90 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE  169 (295)
T ss_dssp             EEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCSCC-------
T ss_pred             EEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCcccccccCCcc
Confidence            9999999999999998766668999999999999999999999999999999999995432                   


Q ss_pred             -------ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccc
Q 039276          166 -------TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLS  226 (263)
Q Consensus       166 -------~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (263)
                             ..++..|+||            |||||||+++||++|..||......   +............. ........
T Consensus       170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~  245 (295)
T 3ugc_A          170 FFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE---FMRMIGNDKQGQMI-VFHLIELL  245 (295)
T ss_dssp             ------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHH---HHHHHCTTCCTHHH-HHHHHHHH
T ss_pred             eeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHH---HHhhhcCccccchh-HHHHHHHH
Confidence                   1345669999            9999999999999999997643111   11111110000000 00000001


Q ss_pred             cccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          227 REDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       227 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ....+.+.+..+++++.+++.+||+.||++|||++||
T Consensus       246 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el  282 (295)
T 3ugc_A          246 KNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL  282 (295)
T ss_dssp             HTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             hccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHH
Confidence            1122334456778889999999999999999999864

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=5.2e-39  Score=270.51  Aligned_cols=211  Identities=18%  Similarity=0.175  Sum_probs=159.2

Q ss_pred             cceecccCceEEEEEEe-cCCceEEEEEeecCCCchHHHHHHHHHHHhhcC-CCcceeEeeEeecCCeeEEEEeccCCCC
Q 039276           37 SNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIR-HQNLIKIISSCSKDDFKALILECMPHGS  114 (263)
Q Consensus        37 ~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~  114 (263)
                      .+.||+|+||.||+|.. .+++.||+|++...   ......+|+.+++.+. ||||+++++++.+....++||||+++++
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~   92 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE   92 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred             CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence            47899999999999994 56899999999754   3456778999999996 9999999999999999999999999999


Q ss_pred             HhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc--------------------------ccc
Q 039276          115 LGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ--------------------------TLA  168 (263)
Q Consensus       115 L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~--------------------------~~g  168 (263)
                      |.+++..... +++..+..++.|++.||+|||+++++||||||+||+....                          ..|
T Consensus        93 L~~~l~~~~~-~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~  171 (325)
T 3kn6_A           93 LFERIKKKKH-FSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF  171 (325)
T ss_dssp             HHHHHHHCSC-CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC----------
T ss_pred             HHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcccccCC
Confidence            9999987654 8999999999999999999999999999999999996321                          235


Q ss_pred             cccccCc------------chhhHHHHHHHHHhCCCCCccccCCC--chhhhHhhhcCCCchhhhhhhcccccccccccc
Q 039276          169 TISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGE--MTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT  234 (263)
Q Consensus       169 ~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (263)
                      |+.|+||            |||||||++|+|++|+.||.......  .......            ..............
T Consensus       172 t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~------------~~i~~~~~~~~~~~  239 (325)
T 3kn6_A          172 TLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIM------------KKIKKGDFSFEGEA  239 (325)
T ss_dssp             ------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHH------------HHHTTTCCCCCSHH
T ss_pred             CcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHH------------HHHHcCCCCCCccc
Confidence            7889999            99999999999999999997532210  1111111            11111110011111


Q ss_pred             hHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          235 KEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       235 ~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ...+++++.+++.+||+.||++|||++|+
T Consensus       240 ~~~~s~~~~~li~~~L~~dP~~Rpt~~el  268 (325)
T 3kn6_A          240 WKNVSQEAKDLIQGLLTVDPNKRLKMSGL  268 (325)
T ss_dssp             HHTSCHHHHHHHHHHHCCCTTTCCCTTTS
T ss_pred             ccCCCHHHHHHHHHHCCCChhHCCCHHHH
Confidence            24567789999999999999999999986

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=2.3e-39  Score=278.85  Aligned_cols=217  Identities=16%  Similarity=0.188  Sum_probs=170.1

Q ss_pred             cccccccceecccCceEEEEEEe-cCCceEEEEEeecCC---CchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCeeEE
Q 039276           31 LFLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY---GGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFKAL  105 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~l  105 (263)
                      ..+|+..+.||+|+||.||+++. .+++.||+|+++...   ......+..|..++..+ +||||+++++++.+.+..++
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  130 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF  130 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence            45799999999999999999994 458899999998652   23345577889988877 89999999999999999999


Q ss_pred             EEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc---------------------
Q 039276          106 ILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI---------------------  164 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~---------------------  164 (263)
                      ||||+++|+|..++..... +++..+..++.|++.||+|||+++|+||||||+||+++.                     
T Consensus       131 V~E~~~gg~L~~~l~~~~~-l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~  209 (396)
T 4dc2_A          131 VIEYVNGGDLMFHMQRQRK-LPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT  209 (396)
T ss_dssp             EEECCTTCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCC
T ss_pred             EEEcCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceeeecccCCCc
Confidence            9999999999999987554 899999999999999999999999999999999999532                     


Q ss_pred             --cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccc
Q 039276          165 --QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDE  230 (263)
Q Consensus       165 --~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (263)
                        ...||+.|+||            |||||||++|||++|+.||......+....        .....+......    .
T Consensus       210 ~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~--------~~~~~~~~~i~~----~  277 (396)
T 4dc2_A          210 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ--------NTEDYLFQVILE----K  277 (396)
T ss_dssp             BCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC--------------CCHHHHHHHHHH----C
T ss_pred             cccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccch--------hhHHHHHHHHhc----c
Confidence              23579999999            999999999999999999964321111000        000000000000    0


Q ss_pred             cccchHHHHHHHHHhhccccccCcCCCCCc
Q 039276          231 HFMTKEQCMSFVFNLAMECTVESPNQRINA  260 (263)
Q Consensus       231 ~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~  260 (263)
                      ....+..+++++.+++.+||+.||++||++
T Consensus       278 ~~~~p~~~s~~~~~li~~lL~~dP~~R~~~  307 (396)
T 4dc2_A          278 QIRIPRSLSVKAASVLKSFLNKDPKERLGC  307 (396)
T ss_dssp             CCCCCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred             ccCCCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence            112344567789999999999999999997

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=4.3e-39  Score=270.64  Aligned_cols=231  Identities=21%  Similarity=0.251  Sum_probs=172.5

Q ss_pred             cccccccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCC----eeE
Q 039276           29 SGLFLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDD----FKA  104 (263)
Q Consensus        29 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~----~~~  104 (263)
                      -...+|+..+.||+|+||.||+|... ++.||||++.... ........|+.+++.++||||+++++++.+..    ..+
T Consensus        21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~   98 (322)
T 3soc_A           21 FQSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLW   98 (322)
T ss_dssp             ETTEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred             cchhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEE
Confidence            34567999999999999999999876 7999999997553 23344556888999999999999999997644    469


Q ss_pred             EEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccC----------CccccccCCCccccccc---------
Q 039276          105 LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFG----------HSTHLLLKEDQSLTQIQ---------  165 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~----------~i~h~dlk~~nil~~~~---------  165 (263)
                      +||||+++|+|.+++....  +++..++.++.|++.||+|||+.          +++||||||+||+.+..         
T Consensus        99 lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg  176 (322)
T 3soc_A           99 LITAFHEKGSLSDFLKANV--VSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFG  176 (322)
T ss_dssp             EEEECCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCT
T ss_pred             EEEecCCCCCHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCC
Confidence            9999999999999997643  89999999999999999999999          99999999999994321         


Q ss_pred             ----------------ccccccccCc-----------------chhhHHHHHHHHHhCCCCCccccCCC-chhhhHhhhc
Q 039276          166 ----------------TLATISYMAP-----------------DTYNFGIMIMETFSGKKPTIKFFHGE-MTLKHWVNDL  211 (263)
Q Consensus       166 ----------------~~g~~~y~aP-----------------Dv~SlG~il~ell~g~~Pf~~~~~~~-~~~~~~~~~~  211 (263)
                                      ..||+.|+||                 |||||||++|||++|+.||....... ..+.......
T Consensus       177 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~  256 (322)
T 3soc_A          177 LALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQH  256 (322)
T ss_dssp             TCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSS
T ss_pred             cccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccC
Confidence                            3578999999                 99999999999999999997543221 1111111110


Q ss_pred             CCC-chhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          212 LPN-SVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       212 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ... .......................+++++.+++.+||+.||++|||+.||
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el  309 (322)
T 3soc_A          257 PSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCV  309 (322)
T ss_dssp             CCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             CchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHH
Confidence            000 0001110000000001111234567789999999999999999999864

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=1.1e-39  Score=277.38  Aligned_cols=208  Identities=18%  Similarity=0.222  Sum_probs=169.8

Q ss_pred             cccccccceecccCceEEEEEEe-cCCceEEEEEeecC---CCchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCeeEE
Q 039276           31 LFLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQ---YGGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFKAL  105 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~---~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~l  105 (263)
                      .++|+..+.||+|+||.||+++. .+++.||+|++...   ..........|..+++.+ +||||+++++++.+.+..|+
T Consensus        22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  101 (353)
T 3txo_A           22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF  101 (353)
T ss_dssp             -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence            46799999999999999999994 56899999999764   233456677899999988 79999999999999999999


Q ss_pred             EEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc---------------------
Q 039276          106 ILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI---------------------  164 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~---------------------  164 (263)
                      ||||+++|+|..++..... +++..++.++.|++.||+|||+++++||||||+||+++.                     
T Consensus       102 v~E~~~gg~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~~  180 (353)
T 3txo_A          102 VMEFVNGGDLMFHIQKSRR-FDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVT  180 (353)
T ss_dssp             EEECCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC----
T ss_pred             EEeCCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceeecccCCcc
Confidence            9999999999999987654 899999999999999999999999999999999999532                     


Q ss_pred             --cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccc
Q 039276          165 --QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDE  230 (263)
Q Consensus       165 --~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (263)
                        ...||+.|+||            |||||||++|||++|+.||..... ...+.....            .        
T Consensus       181 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~-~~~~~~i~~------------~--------  239 (353)
T 3txo_A          181 TATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE-DDLFEAILN------------D--------  239 (353)
T ss_dssp             -----CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHH------------C--------
T ss_pred             ccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCH-HHHHHHHHc------------C--------
Confidence              22589999999            999999999999999999864211 111111111            0        


Q ss_pred             cccchHHHHHHHHHhhccccccCcCCCCCc
Q 039276          231 HFMTKEQCMSFVFNLAMECTVESPNQRINA  260 (263)
Q Consensus       231 ~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~  260 (263)
                      ....+..+++++.+++.+||+.||++||++
T Consensus       240 ~~~~p~~~~~~~~~li~~lL~~dP~~R~~~  269 (353)
T 3txo_A          240 EVVYPTWLHEDATGILKSFMTKNPTMRLGS  269 (353)
T ss_dssp             CCCCCTTSCHHHHHHHHHHTCSSGGGSTTS
T ss_pred             CCCCCCCCCHHHHHHHHHHhhhCHHHccCC
Confidence            011234466779999999999999999998

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=1.9e-39  Score=265.61  Aligned_cols=211  Identities=22%  Similarity=0.302  Sum_probs=172.7

Q ss_pred             ccccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccC
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMP  111 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~  111 (263)
                      .+|+..+.||+|+||.||++...++..||+|.+..... ..+.+.+|+++++.++||||+++++++.+....+++|||++
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   86 (268)
T 3sxs_A            8 EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYIS   86 (268)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred             hheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccC
Confidence            45999999999999999999988888999999976532 44678899999999999999999999999999999999999


Q ss_pred             CCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc------------------------cc
Q 039276          112 HGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ------------------------TL  167 (263)
Q Consensus       112 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~------------------------~~  167 (263)
                      +++|.+++......+++..++.++.|++.||+|||+++++|+||||+||+.+..                        ..
T Consensus        87 ~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~  166 (268)
T 3sxs_A           87 NGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTK  166 (268)
T ss_dssp             TCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCSCC
T ss_pred             CCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccceecchhhhhcccCCC
Confidence            999999998766568999999999999999999999999999999999995432                        13


Q ss_pred             ccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccc
Q 039276          168 ATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT  234 (263)
Q Consensus       168 g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (263)
                      +++.|+||            ||||||+++++|++ |+.||......+. ....            ..       ......
T Consensus       167 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~-~~~~------------~~-------~~~~~~  226 (268)
T 3sxs_A          167 FPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEV-VLKV------------SQ-------GHRLYR  226 (268)
T ss_dssp             CCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHH-HHHH------------HT-------TCCCCC
T ss_pred             cCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHH-HHHH------------Hc-------CCCCCC
Confidence            45669999            99999999999999 9999864311110 0000            00       001112


Q ss_pred             hHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          235 KEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       235 ~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +..+++++.+++.+||+.||++|||+.||
T Consensus       227 ~~~~~~~l~~li~~~l~~~p~~Rps~~~l  255 (268)
T 3sxs_A          227 PHLASDTIYQIMYSCWHELPEKRPTFQQL  255 (268)
T ss_dssp             CTTSCHHHHHHHHHTTCSSGGGSCCHHHH
T ss_pred             CCcChHHHHHHHHHHcCCChhhCcCHHHH
Confidence            33456679999999999999999999764

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=2.1e-39  Score=274.77  Aligned_cols=211  Identities=17%  Similarity=0.256  Sum_probs=172.0

Q ss_pred             cccccccceecccCceEEEEEEe-cCCceEEEEEeecCC---CchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCeeEE
Q 039276           31 LFLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY---GGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFKAL  105 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~l  105 (263)
                      ..+|...+.||+|+||.||+|.. .+++.||+|+++...   .........|..+++.+ +||||+++++++.+.+..|+
T Consensus        16 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~l   95 (345)
T 1xjd_A           16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFF   95 (345)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEE
Confidence            35699999999999999999995 568999999997642   33456677888888876 89999999999999999999


Q ss_pred             EEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc---------------------
Q 039276          106 ILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI---------------------  164 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~---------------------  164 (263)
                      ||||+++|+|.+++..... +++..+..++.|++.||+|||+++++||||||+||+++.                     
T Consensus        96 v~E~~~gg~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~  174 (345)
T 1xjd_A           96 VMEYLNGGDLMYHIQSCHK-FDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK  174 (345)
T ss_dssp             EEECCTTCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCC
T ss_pred             EEeCCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhcccCCCc
Confidence            9999999999999986544 899999999999999999999999999999999999532                     


Q ss_pred             --cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccc
Q 039276          165 --QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDE  230 (263)
Q Consensus       165 --~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (263)
                        ...||+.|+||            |||||||++|||++|+.||..... ...+.....            .        
T Consensus       175 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-~~~~~~i~~------------~--------  233 (345)
T 1xjd_A          175 TNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE-EELFHSIRM------------D--------  233 (345)
T ss_dssp             BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHH------------C--------
T ss_pred             ccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH-HHHHHHHHh------------C--------
Confidence              22578999999            999999999999999999864211 011111100            0        


Q ss_pred             cccchHHHHHHHHHhhccccccCcCCCCCcc-CC
Q 039276          231 HFMTKEQCMSFVFNLAMECTVESPNQRINAK-EM  263 (263)
Q Consensus       231 ~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~-ev  263 (263)
                      ....+..+++++.+++.+||+.||++||++. +|
T Consensus       234 ~~~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i  267 (345)
T 1xjd_A          234 NPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDI  267 (345)
T ss_dssp             CCCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCG
T ss_pred             CCCCCcccCHHHHHHHHHHhcCCHhHcCCChHHH
Confidence            0112344667799999999999999999987 53

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=2.4e-39  Score=268.88  Aligned_cols=211  Identities=19%  Similarity=0.306  Sum_probs=168.0

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCC---CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      .+|+..+.||+|+||.||++. ..++..||+|.+....   ....+.+.+|+.+++.++||||+++++++.+.+..+++|
T Consensus        11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   90 (294)
T 4eqm_A           11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM   90 (294)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence            469999999999999999999 4568999999986543   234567889999999999999999999999999999999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc----------------------
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ----------------------  165 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~----------------------  165 (263)
                      ||+++++|.+++..... +++..++.++.|++.||+|||+++++||||||+||+.+..                      
T Consensus        91 e~~~g~~L~~~l~~~~~-~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  169 (294)
T 4eqm_A           91 EYIEGPTLSEYIESHGP-LSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQT  169 (294)
T ss_dssp             ECCCSCBHHHHHHHHCS-CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC--------
T ss_pred             eCCCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCcccccccccccc
Confidence            99999999999987554 8999999999999999999999999999999999995321                      


Q ss_pred             --ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccc
Q 039276          166 --TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEH  231 (263)
Q Consensus       166 --~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (263)
                        ..||+.|+||            |||||||++|+|++|+.||............. ....+               ...
T Consensus       170 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~-~~~~~---------------~~~  233 (294)
T 4eqm_A          170 NHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHI-QDSVP---------------NVT  233 (294)
T ss_dssp             -----CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHH-SSCCC---------------CHH
T ss_pred             CccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHh-hccCC---------------Ccc
Confidence              2478999999            99999999999999999986421111101000 00000               000


Q ss_pred             ccchHHHHHHHHHhhccccccCcCCCCC
Q 039276          232 FMTKEQCMSFVFNLAMECTVESPNQRIN  259 (263)
Q Consensus       232 ~~~~~~~~~~l~~l~~~cl~~~p~~Rpt  259 (263)
                      ......+++.+.+++.+||+.||++||+
T Consensus       234 ~~~~~~~~~~l~~li~~~l~~dp~~R~~  261 (294)
T 4eqm_A          234 TDVRKDIPQSLSNVILRATEKDKANRYK  261 (294)
T ss_dssp             HHSCTTSCHHHHHHHHHHSCSSGGGSCS
T ss_pred             hhcccCCCHHHHHHHHHHhcCCHhHccc
Confidence            0112345677999999999999999994

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=6e-40  Score=281.58  Aligned_cols=213  Identities=24%  Similarity=0.384  Sum_probs=173.7

Q ss_pred             cccccccceecccCceEEEEEEec-CCceEEEEEeecCCC-chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEe
Q 039276           31 LFLFSESNLISRGGFGSIYKAKIQ-DGMEVVVKGFNLQYG-GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~~-~~~~v~vK~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      ..+|...+.||+|+||.||+|... +++.||+|.+..... .....+.+|+++++.++||||+++++++.+.+..++|||
T Consensus       113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  192 (377)
T 3cbl_A          113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME  192 (377)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence            356999999999999999999964 689999999875532 234567789999999999999999999998889999999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc----------------------
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT----------------------  166 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~----------------------  166 (263)
                      |+++++|.+++...+..+++..+..++.|++.||+|||+++++||||||+||+.+...                      
T Consensus       193 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~  272 (377)
T 3cbl_A          193 LVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASG  272 (377)
T ss_dssp             CCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECCS
T ss_pred             cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeecC
Confidence            9999999999987655589999999999999999999999999999999999954321                      


Q ss_pred             ---cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccc
Q 039276          167 ---LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDE  230 (263)
Q Consensus       167 ---~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (263)
                         .++..|+||            |||||||++|||++ |..||......  ...            ..+.      ...
T Consensus       273 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~--~~~------------~~~~------~~~  332 (377)
T 3cbl_A          273 GLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ--QTR------------EFVE------KGG  332 (377)
T ss_dssp             SCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH--HHH------------HHHH------TTC
T ss_pred             CCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHH------------HHHH------cCC
Confidence               135669999            99999999999998 99998643111  111            1111      111


Q ss_pred             cccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          231 HFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       231 ~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +.+.+..+++++.+++.+||+.||++|||+++|
T Consensus       333 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i  365 (377)
T 3cbl_A          333 RLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTI  365 (377)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHH
Confidence            223345677789999999999999999999764

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=2.2e-39  Score=277.35  Aligned_cols=212  Identities=23%  Similarity=0.396  Sum_probs=171.0

Q ss_pred             ccccccceecccCceEEEEEEec--------CCceEEEEEeecCC-CchHHHHHHHHHHHhhc-CCCcceeEeeEeecCC
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ--------DGMEVVVKGFNLQY-GGAFKNLDVECNMMKII-RHQNLIKIISSCSKDD  101 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~--------~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~  101 (263)
                      .+|...+.||+|+||.||+|...        ++..||+|.+.... ....+.+.+|+++++.+ +||||+++++++.+.+
T Consensus        81 ~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~  160 (370)
T 2psq_A           81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG  160 (370)
T ss_dssp             GGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSS
T ss_pred             HHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCC
Confidence            56999999999999999999842        35679999997653 23456788999999999 8999999999999999


Q ss_pred             eeEEEEeccCCCCHhhhhhhCC---------------CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-
Q 039276          102 FKALILECMPHGSLGKCLSTSN---------------YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-  165 (263)
Q Consensus       102 ~~~lv~e~~~~~~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-  165 (263)
                      ..|+||||+++|+|.+++....               ..+++..++.++.|++.||+|||+++++||||||+||+.+.. 
T Consensus       161 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~  240 (370)
T 2psq_A          161 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN  240 (370)
T ss_dssp             SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTC
T ss_pred             CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEECCCC
Confidence            9999999999999999997643               237888999999999999999999999999999999995321 


Q ss_pred             ------------------------ccccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHh
Q 039276          166 ------------------------TLATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWV  208 (263)
Q Consensus       166 ------------------------~~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~  208 (263)
                                              ..+++.|+||            |||||||++|||++ |+.||...... . +    
T Consensus       241 ~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~-~-~----  314 (370)
T 2psq_A          241 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE-E-L----  314 (370)
T ss_dssp             CEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-G-H----
T ss_pred             CEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH-H-H----
Confidence                                    2346789999            99999999999999 99998643111 1 1    


Q ss_pred             hhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          209 NDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                              ...+...      .+...+..+++++.+++.+||+.||++|||+.||
T Consensus       315 --------~~~~~~~------~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~el  355 (370)
T 2psq_A          315 --------FKLLKEG------HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQL  355 (370)
T ss_dssp             --------HHHHHTT------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             --------HHHHhcC------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence                    1111110      1112344667789999999999999999999864

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=5.3e-39  Score=269.59  Aligned_cols=232  Identities=16%  Similarity=0.204  Sum_probs=176.6

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecCC--eeEEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDD--FKALIL  107 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--~~~lv~  107 (263)
                      .+|...+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|+++++.++|+||+++++++....  ..++||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   88 (319)
T 4euu_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM   88 (319)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence            4599999999999999999995 458999999997653 334567789999999999999999999987654  789999


Q ss_pred             eccCCCCHhhhhhhCCCc--ccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccc----cc-----------------
Q 039276          108 ECMPHGSLGKCLSTSNYI--LDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLT----QI-----------------  164 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~--~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~----~~-----------------  164 (263)
                      ||+++++|.+++......  +++..++.++.|++.||+|||+++++|+||||+||+.    +.                 
T Consensus        89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~  168 (319)
T 4euu_A           89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED  168 (319)
T ss_dssp             ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCT
T ss_pred             eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCC
Confidence            999999999999864332  8999999999999999999999999999999999985    21                 


Q ss_pred             -----cccccccccCc--------------------chhhHHHHHHHHHhCCCCCccccCCCc---hhhhHhhhcCCCch
Q 039276          165 -----QTLATISYMAP--------------------DTYNFGIMIMETFSGKKPTIKFFHGEM---TLKHWVNDLLPNSV  216 (263)
Q Consensus       165 -----~~~g~~~y~aP--------------------Dv~SlG~il~ell~g~~Pf~~~~~~~~---~~~~~~~~~~~~~~  216 (263)
                           ...||+.|+||                    |||||||++|||++|+.||........   .+............
T Consensus       169 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~  248 (319)
T 4euu_A          169 DEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAI  248 (319)
T ss_dssp             TCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCC
T ss_pred             CCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccc
Confidence                 12468889988                    999999999999999999975432222   12222222211111


Q ss_pred             hhhhhhc-----ccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          217 MKVVSAN-----LLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       217 ~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .......     .....+........+++.+.+++.+||+.||++|||++|+
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~el  300 (319)
T 4euu_A          249 SGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQF  300 (319)
T ss_dssp             EEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHH
T ss_pred             hhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHh
Confidence            1100000     0001111112346788899999999999999999999864

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=6e-39  Score=264.70  Aligned_cols=212  Identities=22%  Similarity=0.301  Sum_probs=170.5

Q ss_pred             cccccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           31 LFLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      ..+|+..+.||+|+||.||++...++..||+|++..... ..+.+.+|+++++.++|+||+++++++.+.+..+++|||+
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  101 (283)
T 3gen_A           23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM  101 (283)
T ss_dssp             GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred             HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence            356999999999999999999988888999999986532 3467889999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc------------------------c
Q 039276          111 PHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ------------------------T  166 (263)
Q Consensus       111 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~------------------------~  166 (263)
                      ++++|.+++......+++..++.++.|++.||+|||+++++|+||||+||+.+..                        .
T Consensus       102 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  181 (283)
T 3gen_A          102 ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGS  181 (283)
T ss_dssp             TTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTST
T ss_pred             CCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEccccccccccccccccccCC
Confidence            9999999998755558999999999999999999999999999999999995432                        1


Q ss_pred             cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccccc
Q 039276          167 LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFM  233 (263)
Q Consensus       167 ~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (263)
                      .+++.|+||            ||||||+++|+|++ |+.||...... ......             ...      .+..
T Consensus       182 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~-~~~~~~-------------~~~------~~~~  241 (283)
T 3gen_A          182 KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS-ETAEHI-------------AQG------LRLY  241 (283)
T ss_dssp             TSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-HHHHHH-------------HTT------CCCC
T ss_pred             ccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh-HHHHHH-------------hcc------cCCC
Confidence            345679999            99999999999998 99998643111 000000             000      0111


Q ss_pred             chHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          234 TKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       234 ~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .+..+++.+.+++.+||+.+|++|||+++|
T Consensus       242 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~l  271 (283)
T 3gen_A          242 RPHLASEKVYTIMYSCWHEKADERPTFKIL  271 (283)
T ss_dssp             CCTTCCHHHHHHHHHTTCSSGGGSCCHHHH
T ss_pred             CCCcCCHHHHHHHHHHccCChhHCcCHHHH
Confidence            233445679999999999999999999764

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=2e-39  Score=275.60  Aligned_cols=209  Identities=17%  Similarity=0.154  Sum_probs=172.6

Q ss_pred             cccccccccceecccCceEEEEEEe-cCCceEEEEEeecCC---CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeE
Q 039276           29 SGLFLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKA  104 (263)
Q Consensus        29 ~~~~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~  104 (263)
                      ....+|+..+.||+|+||.||++.. .+++.||+|++....   ......+.+|+.+++.++||||+++++++.+.+..|
T Consensus        38 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~  117 (350)
T 1rdq_E           38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLY  117 (350)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred             CCHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEE
Confidence            3456799999999999999999994 568999999997542   234567888999999999999999999999999999


Q ss_pred             EEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc--------------------
Q 039276          105 LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI--------------------  164 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~--------------------  164 (263)
                      +||||+++++|.+++..... +++..+..++.|++.||+|||+++++||||||+||+++.                    
T Consensus       118 lv~e~~~gg~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~  196 (350)
T 1rdq_E          118 MVMEYVAGGEMFSHLRRIGR-FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW  196 (350)
T ss_dssp             EEEECCTTCBHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBC
T ss_pred             EEEcCCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcccccceeccCCcc
Confidence            99999999999999987554 899999999999999999999999999999999999643                    


Q ss_pred             cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccc
Q 039276          165 QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHF  232 (263)
Q Consensus       165 ~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (263)
                      ...||+.|+||            |||||||++|||++|+.||..... ...+.....            .        ..
T Consensus       197 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-~~~~~~i~~------------~--------~~  255 (350)
T 1rdq_E          197 TLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP-IQIYEKIVS------------G--------KV  255 (350)
T ss_dssp             CCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHH------------C--------CC
T ss_pred             cccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH-HHHHHHHHc------------C--------CC
Confidence            23579999999            999999999999999999863210 011111111            0        01


Q ss_pred             cchHHHHHHHHHhhccccccCcCCCCC
Q 039276          233 MTKEQCMSFVFNLAMECTVESPNQRIN  259 (263)
Q Consensus       233 ~~~~~~~~~l~~l~~~cl~~~p~~Rpt  259 (263)
                      ..+..+++++.+++.+||+.||++||+
T Consensus       256 ~~p~~~~~~~~~li~~lL~~dp~~R~~  282 (350)
T 1rdq_E          256 RFPSHFSSDLKDLLRNLLQVDLTKRFG  282 (350)
T ss_dssp             CCCTTCCHHHHHHHHHHSCSCTTTCTT
T ss_pred             CCCCCCCHHHHHHHHHHhhcCHHhccC
Confidence            123456677999999999999999998

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=100.00  E-value=1.8e-38  Score=264.78  Aligned_cols=238  Identities=25%  Similarity=0.390  Sum_probs=185.6

Q ss_pred             ccceecccCCcccccccccccceecccCceEEEEEEecCCceEEEEEeecCC----CchHHHHHHHHHHHhhcCCCccee
Q 039276           17 SLKSLDLSNNNFSGLFLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQY----GGAFKNLDVECNMMKIIRHQNLIK   92 (263)
Q Consensus        17 ~~~~~~~~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~----~~~~~~~~~e~~~l~~~~h~~i~~   92 (263)
                      ++..+...++++.....|...+.||+|+||.||+|... +..||+|++....    ....+.+.+|+.+++.++||||++
T Consensus        16 ~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~   94 (307)
T 2nru_A           16 SFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVE   94 (307)
T ss_dssp             CHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEESS-SCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             cHHHHHHHHcccccccccccCCccccCCCeEEEEEEEC-CceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEE
Confidence            33444556677777777888899999999999999864 8899999996542    334677889999999999999999


Q ss_pred             EeeEeecCCeeEEEEeccCCCCHhhhhhhC--CCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----
Q 039276           93 IISSCSKDDFKALILECMPHGSLGKCLSTS--NYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----  165 (263)
Q Consensus        93 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----  165 (263)
                      +++++.+.+..+++|||+++++|.+++...  ...+++..++.++.|++.||+|||+++++|+||||+||+.+..     
T Consensus        95 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl  174 (307)
T 2nru_A           95 LLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKI  174 (307)
T ss_dssp             EEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEE
T ss_pred             EEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCCcEEE
Confidence            999999988999999999999999998743  2338899999999999999999999999999999999995321     


Q ss_pred             --------------------ccccccccCc-----------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhc--C
Q 039276          166 --------------------TLATISYMAP-----------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDL--L  212 (263)
Q Consensus       166 --------------------~~g~~~y~aP-----------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~--~  212 (263)
                                          ..|++.|+||           |||||||++|+|++|+.||........ +..+....  .
T Consensus       175 ~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~  253 (307)
T 2nru_A          175 SDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQL-LLDIKEEIEDE  253 (307)
T ss_dssp             CCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTTEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSB-TTHHHHHHHTT
T ss_pred             eecccccccccccccccccccCCCcCcCChHHhcCCCCccchhHHHHHHHHHHHHCCCCcccCcchHH-HHHHHHHhhhh
Confidence                                2478889999           999999999999999999976433221 11111110  1


Q ss_pred             CCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          213 PNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .......++..+       ...+..+++.+.+++.+||+.||++|||+++|
T Consensus       254 ~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l  297 (307)
T 2nru_A          254 EKTIEDYIDKKM-------NDADSTSVEAMYSVASQCLHEKKNKRPDIKKV  297 (307)
T ss_dssp             SCCHHHHSCSSC-------SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred             hhhhhhhccccc-------cccchHHHHHHHHHHHHHcCCCcccCcCHHHH
Confidence            111112221111       12356778889999999999999999999764

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=4.6e-39  Score=272.55  Aligned_cols=214  Identities=17%  Similarity=0.195  Sum_probs=168.8

Q ss_pred             cccccccceecccCceEEEEEEe-cCCceEEEEEeecCCCchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCeeEEEEe
Q 039276           31 LFLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      .++|+..+.||+|+||.||+|.. .+++.||+|++......    ..+|++++..+ +||||+++++++.+....|+|||
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E   96 (342)
T 2qr7_A           21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD----PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE   96 (342)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC----CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred             cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC----hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence            35699999999999999999994 56899999999866432    23578888777 79999999999999999999999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc------------------------
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI------------------------  164 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~------------------------  164 (263)
                      |+++|+|.+++..... +++..+..++.|++.||+|||+++++||||||+||+...                        
T Consensus        97 ~~~gg~L~~~i~~~~~-~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~  175 (342)
T 2qr7_A           97 LMKGGELLDKILRQKF-FSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG  175 (342)
T ss_dssp             CCCSCBHHHHHHTCTT-CCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTC
T ss_pred             CCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCC
Confidence            9999999999976554 899999999999999999999999999999999999411                        


Q ss_pred             ---cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccc
Q 039276          165 ---QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSRED  229 (263)
Q Consensus       165 ---~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (263)
                         ...||+.|+||            |||||||++|||++|+.||......  ........         +..   ....
T Consensus       176 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~~~~~---------i~~---~~~~  241 (342)
T 2qr7_A          176 LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDD--TPEEILAR---------IGS---GKFS  241 (342)
T ss_dssp             CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTS--CHHHHHHH---------HHH---CCCC
T ss_pred             ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcC--CHHHHHHH---------Hcc---CCcc
Confidence               12468889999            9999999999999999999743211  11111110         000   0000


Q ss_pred             ccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          230 EHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       230 ~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ........+++++.+++.+||..||++|||+.|+
T Consensus       242 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~i  275 (342)
T 2qr7_A          242 LSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALV  275 (342)
T ss_dssp             CCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred             cCccccccCCHHHHHHHHHHCCCChhHCcCHHHH
Confidence            0001124567789999999999999999998763

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=7.8e-39  Score=271.46  Aligned_cols=217  Identities=16%  Similarity=0.189  Sum_probs=170.9

Q ss_pred             cccccccceecccCceEEEEEEe-cCCceEEEEEeecCC---CchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCeeEE
Q 039276           31 LFLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY---GGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFKAL  105 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~l  105 (263)
                      ..+|+..+.||+|+||.||+++. .+++.||+|++....   ....+.+.+|..+++.+ +||||+++++++.+.+..|+
T Consensus         8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l   87 (345)
T 3a8x_A            8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF   87 (345)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence            35699999999999999999994 468999999998653   23355677899999887 89999999999999999999


Q ss_pred             EEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc---------------------
Q 039276          106 ILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI---------------------  164 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~---------------------  164 (263)
                      ||||+++++|.+++..... +++..++.++.|++.||+|||+++++||||||+||+++.                     
T Consensus        88 v~e~~~gg~L~~~l~~~~~-l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~~  166 (345)
T 3a8x_A           88 VIEYVNGGDLMFHMQRQRK-LPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT  166 (345)
T ss_dssp             EECCCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTCC
T ss_pred             EEeCCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEeccccccccCCCCc
Confidence            9999999999999986544 899999999999999999999999999999999999532                     


Q ss_pred             --cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccc
Q 039276          165 --QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDE  230 (263)
Q Consensus       165 --~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (263)
                        ...||+.|+||            |||||||++|||++|+.||......+....        .....+......    .
T Consensus       167 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~--------~~~~~~~~~i~~----~  234 (345)
T 3a8x_A          167 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ--------NTEDYLFQVILE----K  234 (345)
T ss_dssp             BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC---------------CHHHHHHHHHH----C
T ss_pred             ccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCccccccccc--------ccHHHHHHHHHc----C
Confidence              22578999999            999999999999999999964311110000        000000000000    0


Q ss_pred             cccchHHHHHHHHHhhccccccCcCCCCCc
Q 039276          231 HFMTKEQCMSFVFNLAMECTVESPNQRINA  260 (263)
Q Consensus       231 ~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~  260 (263)
                      ....+..+++++.+++.+||+.||++||++
T Consensus       235 ~~~~p~~~s~~~~~li~~lL~~dP~~R~~~  264 (345)
T 3a8x_A          235 QIRIPRSLSVKAASVLKSFLNKDPKERLGC  264 (345)
T ss_dssp             CCCCCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred             CCCCCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence            111234567789999999999999999997

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=2.3e-39  Score=277.93  Aligned_cols=209  Identities=19%  Similarity=0.222  Sum_probs=171.6

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecC---CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQ---YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      ++|+..+.||+|+||.||++. ..+++.||+|++...   .......+.+|+++++.++||||+++++++.+.+..|+||
T Consensus        15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~   94 (384)
T 4fr4_A           15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV   94 (384)
T ss_dssp             GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence            569999999999999999999 455889999999754   2344567889999999999999999999999999999999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc----------------------c
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI----------------------Q  165 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~----------------------~  165 (263)
                      ||+++|+|..++..... +++..+..++.|++.||+|||+++++||||||+||+++.                      .
T Consensus        95 e~~~gg~L~~~l~~~~~-l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~  173 (384)
T 4fr4_A           95 DLLLGGDLRYHLQQNVH-FKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITT  173 (384)
T ss_dssp             CCCTTEEHHHHHHTTCC-CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTCCBCC
T ss_pred             ecCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceeeeccCCCceec
Confidence            99999999999986544 899999999999999999999999999999999999532                      2


Q ss_pred             ccccccccCc---------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccc
Q 039276          166 TLATISYMAP---------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDE  230 (263)
Q Consensus       166 ~~g~~~y~aP---------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (263)
                      ..||+.|+||               |||||||++|||++|+.||.......  ......         .+..       .
T Consensus       174 ~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~--~~~~~~---------~~~~-------~  235 (384)
T 4fr4_A          174 MAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS--SKEIVH---------TFET-------T  235 (384)
T ss_dssp             CCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSC--HHHHHH---------HHHH-------C
T ss_pred             cCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCcc--HHHHHH---------HHhh-------c
Confidence            3589999999               99999999999999999986432111  111100         0000       0


Q ss_pred             cccchHHHHHHHHHhhccccccCcCCCCC
Q 039276          231 HFMTKEQCMSFVFNLAMECTVESPNQRIN  259 (263)
Q Consensus       231 ~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt  259 (263)
                      ....+..+++++.+++.+||+.||++||+
T Consensus       236 ~~~~p~~~s~~~~~li~~lL~~dP~~R~s  264 (384)
T 4fr4_A          236 VVTYPSAWSQEMVSLLKKLLEPNPDQRFS  264 (384)
T ss_dssp             CCCCCTTSCHHHHHHHHHHSCSSGGGSCC
T ss_pred             ccCCCCcCCHHHHHHHHHHhcCCHhHhcc
Confidence            11123456778999999999999999998

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=4.4e-39  Score=270.05  Aligned_cols=205  Identities=21%  Similarity=0.224  Sum_probs=169.6

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecC---CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQ---YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      .+|+..+.||+|+||.||++.. .+++.||+|++...   .....+.+.+|+.+++.++||||+++++++.+....|++|
T Consensus         6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~   85 (318)
T 1fot_A            6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   85 (318)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence            4699999999999999999994 56899999999764   2234566788999999999999999999999999999999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc--------------------ccc
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI--------------------QTL  167 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~--------------------~~~  167 (263)
                      ||+++++|.+++..... +++..+..++.|++.||+|||+++++||||||+||+.+.                    ...
T Consensus        86 e~~~gg~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~~~~  164 (318)
T 1fot_A           86 DYIEGGELFSLLRKSQR-FPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLC  164 (318)
T ss_dssp             CCCCSCBHHHHHHHTSS-CCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCCC
T ss_pred             eCCCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcceecCCcccccc
Confidence            99999999999987554 899999999999999999999999999999999999543                    235


Q ss_pred             ccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccch
Q 039276          168 ATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTK  235 (263)
Q Consensus       168 g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (263)
                      ||+.|+||            |||||||++|||++|+.||..... ...+...            ....        ...+
T Consensus       165 gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-~~~~~~i------------~~~~--------~~~p  223 (318)
T 1fot_A          165 GTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT-MKTYEKI------------LNAE--------LRFP  223 (318)
T ss_dssp             SCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH-HHHHHHH------------HHCC--------CCCC
T ss_pred             CCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH-HHHHHHH------------HhCC--------CCCC
Confidence            89999999            999999999999999999864211 0111111            1110        1123


Q ss_pred             HHHHHHHHHhhccccccCcCCCC
Q 039276          236 EQCMSFVFNLAMECTVESPNQRI  258 (263)
Q Consensus       236 ~~~~~~l~~l~~~cl~~~p~~Rp  258 (263)
                      ..+++++.+++.+||+.||++||
T Consensus       224 ~~~~~~~~~li~~lL~~dp~~R~  246 (318)
T 1fot_A          224 PFFNEDVKDLLSRLITRDLSQRL  246 (318)
T ss_dssp             TTSCHHHHHHHHHHTCSCTTTCT
T ss_pred             CCCCHHHHHHHHHHhccCHHHcC
Confidence            44567799999999999999999

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=5.2e-39  Score=273.01  Aligned_cols=213  Identities=19%  Similarity=0.203  Sum_probs=165.4

Q ss_pred             ccccccceecccCceEEEEEEec-CCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ-DGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~-~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      +.|+..+.||+|+||.||+|... +++.||+|++....  ..+.+.+|+++++.++|+||+++++++.+....+++|||+
T Consensus        53 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  130 (349)
T 2w4o_A           53 DFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELV  130 (349)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             CcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeC
Confidence            56999999999999999999954 58899999998653  3456778999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-------------------------c
Q 039276          111 PHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-------------------------Q  165 (263)
Q Consensus       111 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-------------------------~  165 (263)
                      ++++|.+++..... +++..++.++.|++.||+|||+++++||||||+||+...                         .
T Consensus       131 ~~~~L~~~l~~~~~-~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~  209 (349)
T 2w4o_A          131 TGGELFDRIVEKGY-YSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKT  209 (349)
T ss_dssp             CSCBHHHHHTTCSS-CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC-------------
T ss_pred             CCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCccccccc
Confidence            99999999976544 899999999999999999999999999999999999642                         1


Q ss_pred             ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccccc
Q 039276          166 TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFM  233 (263)
Q Consensus       166 ~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (263)
                      ..||+.|+||            |||||||++|||++|+.||.........+........                ....+
T Consensus       210 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~----------------~~~~~  273 (349)
T 2w4o_A          210 VCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEY----------------YFISP  273 (349)
T ss_dssp             ---CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCC----------------CCCTT
T ss_pred             ccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCC----------------ccCCc
Confidence            2468889999            9999999999999999998643222112221111100                00011


Q ss_pred             chHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          234 TKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       234 ~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ....++.++.+++.+||+.||++|||+.|+
T Consensus       274 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~  303 (349)
T 2w4o_A          274 WWDEVSLNAKDLVRKLIVLDPKKRLTTFQA  303 (349)
T ss_dssp             TTTTSCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred             hhhhCCHHHHHHHHHHccCChhhCcCHHHH
Confidence            224566779999999999999999998763

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=100.00  E-value=1.8e-39  Score=268.54  Aligned_cols=211  Identities=19%  Similarity=0.283  Sum_probs=168.9

Q ss_pred             ccccccceecccCceEEEEEEec-CC-------ceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCee
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ-DG-------MEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFK  103 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~-~~-------~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~  103 (263)
                      ++|...+.||+|+||.||+|... ++       ..|++|.+........+.+.+|+.+++.++|+||+++++++.+.+..
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   87 (289)
T 4fvq_A            8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN   87 (289)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred             hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence            46999999999999999999843 33       47999999877666778899999999999999999999999998899


Q ss_pred             EEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc-----------------
Q 039276          104 ALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT-----------------  166 (263)
Q Consensus       104 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~-----------------  166 (263)
                      +++|||+++++|.+++......+++..++.++.|++.||+|||+++++||||||+||+.+...                 
T Consensus        88 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~  167 (289)
T 4fvq_A           88 ILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGI  167 (289)
T ss_dssp             EEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCS
T ss_pred             EEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeeeccCcc
Confidence            999999999999999988766689999999999999999999999999999999999964322                 


Q ss_pred             ----------cccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhc
Q 039276          167 ----------LATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSAN  223 (263)
Q Consensus       167 ----------~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (263)
                                .|+..|+||             |||||||++|||++|..|+........... ...            . 
T Consensus       168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~-~~~------------~-  233 (289)
T 4fvq_A          168 SITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQ-FYE------------D-  233 (289)
T ss_dssp             CTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHH-HHH------------T-
T ss_pred             cccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHH-Hhh------------c-
Confidence                      257779999             999999999999996555332111111000 000            0 


Q ss_pred             ccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          224 LLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                             ....+...++++.+++.+||+.||++|||++||
T Consensus       234 -------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l  266 (289)
T 4fvq_A          234 -------RHQLPAPKAAELANLINNCMDYEPDHRPSFRAI  266 (289)
T ss_dssp             -------TCCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHH
T ss_pred             -------cCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence                   000112224458899999999999999999764

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=2.8e-39  Score=277.00  Aligned_cols=212  Identities=21%  Similarity=0.378  Sum_probs=170.1

Q ss_pred             ccccccceecccCceEEEEEEec----CCceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ----DGMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALI  106 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~----~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv  106 (263)
                      .+|+..+.||+|+||.||+|...    ++..||+|.+.... ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus        45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv  124 (373)
T 2qol_A           45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV  124 (373)
T ss_dssp             GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred             hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence            56999999999999999999853    47789999997653 33456788999999999999999999999999999999


Q ss_pred             EeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc--------------------
Q 039276          107 LECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT--------------------  166 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~--------------------  166 (263)
                      |||+++++|.+++......+++..++.++.|++.||+|||+++++||||||+||+.+...                    
T Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~  204 (373)
T 2qol_A          125 TEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAA  204 (373)
T ss_dssp             EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC-------------
T ss_pred             EeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCccccccccCCccc
Confidence            999999999999987665689999999999999999999999999999999999954321                    


Q ss_pred             ------cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccc
Q 039276          167 ------LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSR  227 (263)
Q Consensus       167 ------~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (263)
                            .+++.|+||            |||||||++|||++ |+.||......  .            ....+...    
T Consensus       205 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~--~------------~~~~i~~~----  266 (373)
T 2qol_A          205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ--D------------VIKAVDEG----  266 (373)
T ss_dssp             ---------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH--H------------HHHHHHTT----
T ss_pred             eeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH--H------------HHHHHHcC----
Confidence                  235679999            99999999999998 99998642111  0            01111111    


Q ss_pred             ccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          228 EDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       228 ~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                        .+.+.+..+++++.+++.+||+.||++|||+++|
T Consensus       267 --~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i  300 (373)
T 2qol_A          267 --YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQI  300 (373)
T ss_dssp             --EECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             --CCCCCCccccHHHHHHHHHHhCcChhhCcCHHHH
Confidence              1112234567779999999999999999999764

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=9.3e-39  Score=283.30  Aligned_cols=215  Identities=19%  Similarity=0.232  Sum_probs=170.1

Q ss_pred             cccccccceecccCceEEEEEEe-cCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           31 LFLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      ..+|+..+.||+|+||.||+|.. .++..+|+|++....  ......+.+|+.+++.++||||+++++++.+....++||
T Consensus        36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  115 (494)
T 3lij_A           36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM  115 (494)
T ss_dssp             HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            35699999999999999999994 468899999997652  334677889999999999999999999999999999999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-----------------------
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-----------------------  164 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-----------------------  164 (263)
                      ||+++|+|.+++..... +++..++.++.|++.||+|||+++++||||||+||+...                       
T Consensus       116 e~~~~g~L~~~~~~~~~-~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~  194 (494)
T 3lij_A          116 ECYKGGELFDEIIHRMK-FNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK  194 (494)
T ss_dssp             ECCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBC
T ss_pred             ecCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCcc
Confidence            99999999998876544 899999999999999999999999999999999999632                       


Q ss_pred             --cccccccccCc-----------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccc
Q 039276          165 --QTLATISYMAP-----------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEH  231 (263)
Q Consensus       165 --~~~g~~~y~aP-----------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (263)
                        ...||+.|+||           |||||||++|+|++|..||...... ..+......                .....
T Consensus       195 ~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~i~~~----------------~~~~~  257 (494)
T 3lij_A          195 MKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ-EILRKVEKG----------------KYTFD  257 (494)
T ss_dssp             BCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHT----------------CCCCC
T ss_pred             ccccCCCcCeeCHHHHcccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhC----------------CCCCC
Confidence              12478899999           9999999999999999998642111 111111110                00001


Q ss_pred             ccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          232 FMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       232 ~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .+....+++++.+++.+||+.||++|||+.|+
T Consensus       258 ~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~  289 (494)
T 3lij_A          258 SPEWKNVSEGAKDLIKQMLQFDSQRRISAQQA  289 (494)
T ss_dssp             SGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred             chhcccCCHHHHHHHHHHCCCChhhCccHHHH
Confidence            11224567789999999999999999998763

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=3.4e-39  Score=268.18  Aligned_cols=212  Identities=21%  Similarity=0.291  Sum_probs=165.4

Q ss_pred             cccccccceecccCceEEEEEE-ecCCceEEEEEeecCCC--------------------------chHHHHHHHHHHHh
Q 039276           31 LFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYG--------------------------GAFKNLDVECNMMK   83 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~--------------------------~~~~~~~~e~~~l~   83 (263)
                      ..+|+..+.||+|+||.||+|. ..+++.||+|++.....                          ...+.+.+|+++++
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   91 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK   91 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred             ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence            3569999999999999999998 45689999999976521                          12356788999999


Q ss_pred             hcCCCcceeEeeEeec--CCeeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccc
Q 039276           84 IIRHQNLIKIISSCSK--DDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSL  161 (263)
Q Consensus        84 ~~~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil  161 (263)
                      .++||||+++++++.+  ....+++|||+++++|.+++...  .+++..++.++.|++.||+|||+++++|+||||+||+
T Consensus        92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil  169 (298)
T 2zv2_A           92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK--PLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLL  169 (298)
T ss_dssp             TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEE
T ss_pred             hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEE
Confidence            9999999999999976  56889999999999999876543  4899999999999999999999999999999999999


Q ss_pred             ccc-----------------------cccccccccCc---------------chhhHHHHHHHHHhCCCCCccccCCCch
Q 039276          162 TQI-----------------------QTLATISYMAP---------------DTYNFGIMIMETFSGKKPTIKFFHGEMT  203 (263)
Q Consensus       162 ~~~-----------------------~~~g~~~y~aP---------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~  203 (263)
                      .+.                       ...||+.|+||               |||||||++|+|++|+.||.....  ..
T Consensus       170 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~--~~  247 (298)
T 2zv2_A          170 VGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI--MC  247 (298)
T ss_dssp             ECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSH--HH
T ss_pred             ECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccH--HH
Confidence            532                       23578899999               999999999999999999864210  00


Q ss_pred             hhhHhhhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          204 LKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +....           ...      ....+....+++++.+++.+||+.||++|||+.||
T Consensus       248 ~~~~~-----------~~~------~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~  290 (298)
T 2zv2_A          248 LHSKI-----------KSQ------ALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEI  290 (298)
T ss_dssp             HHHHH-----------HHC------CCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHH
T ss_pred             HHHHH-----------hcc------cCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHH
Confidence            10000           000      00111223456779999999999999999999764

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=100.00  E-value=9.8e-39  Score=263.93  Aligned_cols=213  Identities=23%  Similarity=0.401  Sum_probs=172.1

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCCCch-------HHHHHHHHHHHhhcCCCcceeEeeEeecCCee
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGA-------FKNLDVECNMMKIIRHQNLIKIISSCSKDDFK  103 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~~-------~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~  103 (263)
                      .+|+..+.||+|+||.||+|.. .+++.||+|.+.......       .+.+.+|+++++.++|+||+++++++.+..  
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--   96 (287)
T 4f0f_A           19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--   96 (287)
T ss_dssp             TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred             ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence            4699999999999999999994 578999999996653221       267889999999999999999999987665  


Q ss_pred             EEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCC--ccccccCCCccccccc----------------
Q 039276          104 ALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGH--STHLLLKEDQSLTQIQ----------------  165 (263)
Q Consensus       104 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--i~h~dlk~~nil~~~~----------------  165 (263)
                      +++|||+++++|.+++......+++..++.++.|++.||+|||+++  ++|+||||+||+....                
T Consensus        97 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~  176 (287)
T 4f0f_A           97 RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS  176 (287)
T ss_dssp             EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTC
T ss_pred             eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCcc
Confidence            7999999999999988776666899999999999999999999999  9999999999996321                


Q ss_pred             ---------ccccccccCc--------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhh
Q 039276          166 ---------TLATISYMAP--------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSA  222 (263)
Q Consensus       166 ---------~~g~~~y~aP--------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (263)
                               ..|++.|+||              |||||||++|||++|+.||................            
T Consensus       177 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~------------  244 (287)
T 4f0f_A          177 QQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIRE------------  244 (287)
T ss_dssp             BCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHH------------
T ss_pred             ccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhc------------
Confidence                     2468889999              99999999999999999987543222211111110            


Q ss_pred             cccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          223 NLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                           ...+...+..+++++.+++.+||+.||++|||++||
T Consensus       245 -----~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l  280 (287)
T 4f0f_A          245 -----EGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYI  280 (287)
T ss_dssp             -----SCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             -----cCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHH
Confidence                 111112345667789999999999999999999764

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=100.00  E-value=8e-39  Score=263.14  Aligned_cols=214  Identities=21%  Similarity=0.223  Sum_probs=174.1

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      .+|...+.||+|+||.||+|.. .++..+++|.+........+.+.+|+++++.++||||+++++++.+....+++|||+
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   88 (277)
T 3f3z_A            9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELC   88 (277)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEecc
Confidence            4699999999999999999994 457889999998776667788999999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccc---cc----------------------c
Q 039276          111 PHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLT---QI----------------------Q  165 (263)
Q Consensus       111 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~---~~----------------------~  165 (263)
                      ++++|.+++..... +++..++.++.|++.||+|||+++++|+||||+||+.   +.                      .
T Consensus        89 ~~~~L~~~~~~~~~-~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~  167 (277)
T 3f3z_A           89 TGGELFERVVHKRV-FRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRT  167 (277)
T ss_dssp             CSCBHHHHHHHHCS-CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCBCC
T ss_pred             CCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccchhc
Confidence            99999999876554 8999999999999999999999999999999999996   21                      1


Q ss_pred             ccccccccCc-----------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccc
Q 039276          166 TLATISYMAP-----------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT  234 (263)
Q Consensus       166 ~~g~~~y~aP-----------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (263)
                      ..|++.|+||           ||||||+++++|++|+.||...... .............                ....
T Consensus       168 ~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~----------------~~~~  230 (277)
T 3f3z_A          168 KVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDS-EVMLKIREGTFTF----------------PEKD  230 (277)
T ss_dssp             CCSCTTTCCHHHHTTCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHCCCCC----------------CHHH
T ss_pred             cCCCCCccChHHhcccCCchhhehhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHhCCCCC----------------Cchh
Confidence            2478889999           9999999999999999998643111 1111110000000                0001


Q ss_pred             hHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          235 KEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       235 ~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ...+++++.+++.+||+.||++|||+.++
T Consensus       231 ~~~~~~~~~~li~~~l~~dp~~R~s~~~~  259 (277)
T 3f3z_A          231 WLNVSPQAESLIRRLLTKSPKQRITSLQA  259 (277)
T ss_dssp             HTTSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred             hhcCCHHHHHHHHHHccCChhhCcCHHHH
Confidence            12456779999999999999999998763

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=7.4e-39  Score=283.43  Aligned_cols=214  Identities=20%  Similarity=0.216  Sum_probs=175.0

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecC--CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEe
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQ--YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      ++|+..+.||+|+||.||+|.. .+++.||+|++...  .......+.+|+++++.++||||+++++++.+....++|||
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  101 (486)
T 3mwu_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE  101 (486)
T ss_dssp             HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEE
Confidence            5699999999999999999994 46899999999654  23456778899999999999999999999999999999999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc------------------------
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI------------------------  164 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~------------------------  164 (263)
                      |+++++|.+++..... +++..+..++.|++.||+|||+++++||||||+||+...                        
T Consensus       102 ~~~~~~L~~~~~~~~~-~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~  180 (486)
T 3mwu_A          102 LYTGGELFDEIIKRKR-FSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM  180 (486)
T ss_dssp             CCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC---
T ss_pred             cCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCCcc
Confidence            9999999998876554 899999999999999999999999999999999999632                        


Q ss_pred             -cccccccccCc-----------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccc
Q 039276          165 -QTLATISYMAP-----------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHF  232 (263)
Q Consensus       165 -~~~g~~~y~aP-----------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (263)
                       ...||+.|+||           |||||||++|+|++|+.||...... ..+.....                .......
T Consensus       181 ~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~i~~----------------~~~~~~~  243 (486)
T 3mwu_A          181 KDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEY-DILKRVET----------------GKYAFDL  243 (486)
T ss_dssp             -CCTTGGGGCCGGGGGSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHH----------------TCCCSCS
T ss_pred             CCCcCCCCCCCHHHhCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHh----------------CCCCCCC
Confidence             12579999999           9999999999999999998642110 11111111                0111111


Q ss_pred             cchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          233 MTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       233 ~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +....+++++.+++.+||+.||++|||+.|+
T Consensus       244 ~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~  274 (486)
T 3mwu_A          244 PQWRTISDDAKDLIRKMLTFHPSLRITATQC  274 (486)
T ss_dssp             GGGGGSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred             cccCCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence            2234667789999999999999999998763

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=5.7e-39  Score=265.36  Aligned_cols=214  Identities=21%  Similarity=0.269  Sum_probs=171.0

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      ++|...+.||+|+||.||++.. .++..+|+|.+.... ....+.+.+|+++++.++||||+++++++.+....++||||
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~  101 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET  101 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence            5699999999999999999994 568999999997663 33567888999999999999999999999999999999999


Q ss_pred             cCCCCHhhhhhhC---CCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc----------------------
Q 039276          110 MPHGSLGKCLSTS---NYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI----------------------  164 (263)
Q Consensus       110 ~~~~~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~----------------------  164 (263)
                      +++++|.+++...   ...+++..++.++.|++.||+|||+++++|+||||+||+...                      
T Consensus       102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~  181 (285)
T 3is5_A          102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE  181 (285)
T ss_dssp             CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-----
T ss_pred             CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcc
Confidence            9999999988642   234899999999999999999999999999999999999621                      


Q ss_pred             ---cccccccccCc-----------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccc
Q 039276          165 ---QTLATISYMAP-----------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDE  230 (263)
Q Consensus       165 ---~~~g~~~y~aP-----------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (263)
                         ...|++.|+||           |||||||+++||++|+.||......  .........                ...
T Consensus       182 ~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~--~~~~~~~~~----------------~~~  243 (285)
T 3is5_A          182 HSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE--EVQQKATYK----------------EPN  243 (285)
T ss_dssp             -----CTTGGGCCHHHHTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHC----------------CCC
T ss_pred             cCcCcccccCcCChHHhccCCCcccCeehHHHHHHHHHhCCCCCCCCCHH--HHHhhhccC----------------Ccc
Confidence               12468889999           9999999999999999998642111  010000000                000


Q ss_pred             cccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          231 HFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       231 ~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .......+++++.+++.+||+.||++|||+.||
T Consensus       244 ~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~  276 (285)
T 3is5_A          244 YAVECRPLTPQAVDLLKQMLTKDPERRPSAAQV  276 (285)
T ss_dssp             CCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHH
T ss_pred             cccccCcCCHHHHHHHHHHccCChhhCcCHHHH
Confidence            000112245678999999999999999999864

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=100.00  E-value=1e-38  Score=265.54  Aligned_cols=220  Identities=18%  Similarity=0.254  Sum_probs=175.7

Q ss_pred             CcccccccccccceecccCceEEEEEEec-CCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeE
Q 039276           26 NNFSGLFLFSESNLISRGGFGSIYKAKIQ-DGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKA  104 (263)
Q Consensus        26 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~-~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~  104 (263)
                      +.+.....|+..+.||+|+||.||+|... ++..|++|.+........+.+.+|+++++.++||||+++++++.+.+..+
T Consensus        13 ~~~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   92 (302)
T 2j7t_A           13 RDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLW   92 (302)
T ss_dssp             SSSCGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEE
T ss_pred             cccCCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEE
Confidence            34455677999999999999999999954 58899999998776667788899999999999999999999999999999


Q ss_pred             EEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-------------------
Q 039276          105 LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-------------------  165 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-------------------  165 (263)
                      ++|||+++++|.+++......+++..+..++.|++.||+|||.++++|+||+|+||+.+..                   
T Consensus        93 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  172 (302)
T 2j7t_A           93 IMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQ  172 (302)
T ss_dssp             EEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHH
T ss_pred             EEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCcccccccc
Confidence            9999999999999987755568999999999999999999999999999999999995421                   


Q ss_pred             ----ccccccccCc-----------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcc
Q 039276          166 ----TLATISYMAP-----------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANL  224 (263)
Q Consensus       166 ----~~g~~~y~aP-----------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (263)
                          ..|++.|+||                 |||||||++++|++|+.||....... ........              
T Consensus       173 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~--------------  237 (302)
T 2j7t_A          173 KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR-VLLKIAKS--------------  237 (302)
T ss_dssp             C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHS--------------
T ss_pred             ccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHH-HHHHHhcc--------------
Confidence                2478889998                 99999999999999999986431110 01111000              


Q ss_pred             cccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          225 LSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       225 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                         .......+..++.++.+++.+||+.||++|||+++|
T Consensus       238 ---~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l  273 (302)
T 2j7t_A          238 ---DPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQL  273 (302)
T ss_dssp             ---CCCCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred             ---CCcccCCccccCHHHHHHHHHHcccChhhCCCHHHH
Confidence               001112345567779999999999999999998764

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=100.00  E-value=4.8e-39  Score=264.60  Aligned_cols=211  Identities=20%  Similarity=0.316  Sum_probs=165.4

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCC---CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      .+|...+.||+|+||.||+|.. .+++.||+|.+....   ....+.+.+|+.+++.++||||+++++++.+.+..++++
T Consensus        11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   90 (278)
T 3cok_A           11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL   90 (278)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence            4599999999999999999994 568999999997542   233567889999999999999999999999999999999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc----------------------
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ----------------------  165 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~----------------------  165 (263)
                      ||+++++|.+++......+++..++.++.|++.||+|||+++++|+||+|+||+.+..                      
T Consensus        91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~  170 (278)
T 3cok_A           91 EMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHY  170 (278)
T ss_dssp             ECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC-------
T ss_pred             ecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCCcce
Confidence            9999999999998765668999999999999999999999999999999999995432                      


Q ss_pred             -ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccc
Q 039276          166 -TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHF  232 (263)
Q Consensus       166 -~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (263)
                       ..|++.|+||            ||||||+++++|++|+.||......+. +.            .....        ..
T Consensus       171 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~------------~~~~~--------~~  229 (278)
T 3cok_A          171 TLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT-LN------------KVVLA--------DY  229 (278)
T ss_dssp             ---------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC------------------CCSS--------CC
T ss_pred             eccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH-HH------------HHhhc--------cc
Confidence             2467889999            999999999999999999864321110 00            00000        01


Q ss_pred             cchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          233 MTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       233 ~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ..+..++.++.+++.+||+.||++|||+++|
T Consensus       230 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~  260 (278)
T 3cok_A          230 EMPSFLSIEAKDLIHQLLRRNPADRLSLSSV  260 (278)
T ss_dssp             CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             CCccccCHHHHHHHHHHcccCHhhCCCHHHH
Confidence            1233456679999999999999999999764

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=100.00  E-value=3.6e-39  Score=266.79  Aligned_cols=214  Identities=12%  Similarity=-0.001  Sum_probs=168.9

Q ss_pred             ccccccceecccCceEEEEEEec-CCceEEEEEeecCCC---chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ-DGMEVVVKGFNLQYG---GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~-~~~~v~vK~~~~~~~---~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      ++|+..+.||+|+||.||+|... +++.||+|++.....   ...+.+.+|+..++.++|+||+++++++.+.+..|+||
T Consensus        31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  110 (286)
T 3uqc_A           31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA  110 (286)
T ss_dssp             TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence            56999999999999999999954 589999999976532   23467889999999999999999999999999999999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc---cccccccCc-----chhh
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT---LATISYMAP-----DTYN  179 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~---~g~~~y~aP-----Dv~S  179 (263)
                      ||+++++|.+++..+   .....+..++.|++.||+|||+++++||||||+||+.+..+   .++..|++|     ||||
T Consensus       111 e~~~g~~L~~~l~~~---~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~~~~~~~~~~~~~Di~s  187 (286)
T 3uqc_A          111 EWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPATMPDANPQDDIRG  187 (286)
T ss_dssp             ECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEECSCCCCTTCCHHHHHHH
T ss_pred             EecCCCCHHHHHhcC---CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEEeccccCCCCchhHHHH
Confidence            999999999999653   34556788999999999999999999999999999987553   457778888     9999


Q ss_pred             HHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCC
Q 039276          180 FGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRIN  259 (263)
Q Consensus       180 lG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt  259 (263)
                      |||++|||++|+.||...........          .......    ...........+++++.+++.+||+.||++| |
T Consensus       188 lG~il~elltg~~Pf~~~~~~~~~~~----------~~~~~~~----~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s  252 (286)
T 3uqc_A          188 IGASLYALLVNRWPLPEAGVRSGLAP----------AERDTAG----QPIEPADIDRDIPFQISAVAARSVQGDGGIR-S  252 (286)
T ss_dssp             HHHHHHHHHHSEECSCCCSBCCCSEE----------CCBCTTS----CBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-C
T ss_pred             HHHHHHHHHHCCCCCCcCCcchhhHH----------HHHHhcc----CCCChhhcccCCCHHHHHHHHHHcccCCccC-C
Confidence            99999999999999875322110000          0000000    0000001124567779999999999999999 9


Q ss_pred             ccCC
Q 039276          260 AKEM  263 (263)
Q Consensus       260 ~~ev  263 (263)
                      +.|+
T Consensus       253 ~~el  256 (286)
T 3uqc_A          253 ASTL  256 (286)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8764

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=3.6e-39  Score=275.77  Aligned_cols=212  Identities=22%  Similarity=0.374  Sum_probs=170.7

Q ss_pred             ccccccceecccCceEEEEEEec------CCceEEEEEeecC-CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ------DGMEVVVKGFNLQ-YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKA  104 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~------~~~~v~vK~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~  104 (263)
                      .+|...+.||+|+||.||+|.+.      +++.||||.+... .......+.+|+.+++.++|+||+++++++.+....+
T Consensus        71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~  150 (367)
T 3l9p_A           71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF  150 (367)
T ss_dssp             GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence            56999999999999999999843      3678999999754 2334556888999999999999999999999988999


Q ss_pred             EEEeccCCCCHhhhhhhCC------CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-------------
Q 039276          105 LILECMPHGSLGKCLSTSN------YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-------------  165 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-------------  165 (263)
                      +||||+++|+|.+++....      ..+++..++.++.|++.||+|||+++++||||||+||+++..             
T Consensus       151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~  230 (367)
T 3l9p_A          151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM  230 (367)
T ss_dssp             EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHH
T ss_pred             EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEECCCcc
Confidence            9999999999999997643      238889999999999999999999999999999999996521             


Q ss_pred             ---------------ccccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchh
Q 039276          166 ---------------TLATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVM  217 (263)
Q Consensus       166 ---------------~~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~  217 (263)
                                     ..||+.|+||            |||||||++|||++ |..||.....  ..+...          
T Consensus       231 a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~--~~~~~~----------  298 (367)
T 3l9p_A          231 ARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVLEF----------  298 (367)
T ss_dssp             HHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HHHHHH----------
T ss_pred             ccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHH----------
Confidence                           2357789999            99999999999998 9999864211  111100          


Q ss_pred             hhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          218 KVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                        +...      .+...+..+++++.+++.+||+.||++|||+.+|
T Consensus       299 --i~~~------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ei  336 (367)
T 3l9p_A          299 --VTSG------GRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII  336 (367)
T ss_dssp             --HHTT------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             --HHcC------CCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHH
Confidence              1000      0112234566779999999999999999999764

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=2.3e-38  Score=263.27  Aligned_cols=217  Identities=23%  Similarity=0.316  Sum_probs=167.2

Q ss_pred             ccccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhh--cCCCcceeEeeEeec----CCeeEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKI--IRHQNLIKIISSCSK----DDFKAL  105 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~--~~h~~i~~~~~~~~~----~~~~~l  105 (263)
                      .+|+..+.||+|+||.||+|... ++.||||++...   ....+..|.+++..  ++||||+++++++.+    ....++
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~l   83 (301)
T 3q4u_A            8 RDITLLECVGKGRYGEVWRGSWQ-GENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWL   83 (301)
T ss_dssp             GGCEEEEEEEECSSEEEEEEEET-TEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred             CcEEEEEeeccCCCcEEEEEEEC-CEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEE
Confidence            46999999999999999999874 899999998754   33445556666665  799999999998644    346899


Q ss_pred             EEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhc--------cCCccccccCCCccccccc------------
Q 039276          106 ILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLH--------FGHSTHLLLKEDQSLTQIQ------------  165 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH--------~~~i~h~dlk~~nil~~~~------------  165 (263)
                      +|||+++++|.++++..  .+++..++.++.|++.||+|||        .++++||||||+||+.+..            
T Consensus        84 v~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~  161 (301)
T 3q4u_A           84 ITHYHEMGSLYDYLQLT--TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAV  161 (301)
T ss_dssp             EECCCTTCBHHHHHTTC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             ehhhccCCCHHHHHhhc--ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCee
Confidence            99999999999999654  3899999999999999999999        9999999999999995321            


Q ss_pred             ---------------ccccccccCc------------------chhhHHHHHHHHHhC----------CCCCccccCCCc
Q 039276          166 ---------------TLATISYMAP------------------DTYNFGIMIMETFSG----------KKPTIKFFHGEM  202 (263)
Q Consensus       166 ---------------~~g~~~y~aP------------------Dv~SlG~il~ell~g----------~~Pf~~~~~~~~  202 (263)
                                     ..||+.|+||                  |||||||++|||++|          +.||........
T Consensus       162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~  241 (301)
T 3q4u_A          162 MHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDP  241 (301)
T ss_dssp             EEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred             ecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCc
Confidence                           2578999999                  999999999999999          777765443333


Q ss_pred             hhhhHhhhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          203 TLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ................         ..........+++++.+++.+||+.||++|||+.||
T Consensus       242 ~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i  293 (301)
T 3q4u_A          242 SFEDMRKVVCVDQQRP---------NIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRI  293 (301)
T ss_dssp             CHHHHHHHHTTSCCCC---------CCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred             chhhhhHHHhccCCCC---------CCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHH
Confidence            3332222111111000         000011234678889999999999999999999864

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=9.2e-39  Score=282.67  Aligned_cols=214  Identities=20%  Similarity=0.253  Sum_probs=175.2

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCC---CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      .+|+..+.||+|+||.||+|.. .+++.||+|++....   ......+.+|+++++.++||||+++++++.+.+..++|+
T Consensus        26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  105 (484)
T 3nyv_A           26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG  105 (484)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence            5699999999999999999994 468999999997652   345677889999999999999999999999999999999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-----------------------
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-----------------------  164 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-----------------------  164 (263)
                      ||+++++|.+++..... +++..++.++.|++.||+|||+++++||||||+||+...                       
T Consensus       106 e~~~~~~L~~~~~~~~~-~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~  184 (484)
T 3nyv_A          106 EVYTGGELFDEIISRKR-FSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK  184 (484)
T ss_dssp             CCCCSCBHHHHHHTCSC-CBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCCS
T ss_pred             ecCCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcccccc
Confidence            99999999999876554 899999999999999999999999999999999999631                       


Q ss_pred             --cccccccccCc-----------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccc
Q 039276          165 --QTLATISYMAP-----------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEH  231 (263)
Q Consensus       165 --~~~g~~~y~aP-----------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (263)
                        ...||+.|+||           |||||||++|+|++|+.||...... ..+.....                ......
T Consensus       185 ~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~i~~----------------~~~~~~  247 (484)
T 3nyv_A          185 MKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEY-DILKKVEK----------------GKYTFE  247 (484)
T ss_dssp             HHHHTTGGGTCCHHHHHTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHH----------------CCCCCC
T ss_pred             cccCCCCccccCceeecCCCCCcceeHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHc----------------CCCCCC
Confidence              12479999999           9999999999999999998642110 11111111                000011


Q ss_pred             ccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          232 FMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       232 ~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .+....+++++.+++.+||+.||++|||+.|+
T Consensus       248 ~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~  279 (484)
T 3nyv_A          248 LPQWKKVSESAKDLIRKMLTYVPSMRISARDA  279 (484)
T ss_dssp             SGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             CcccccCCHHHHHHHHHHCCCChhHCcCHHHH
Confidence            12234667789999999999999999998763

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=4.4e-39  Score=283.19  Aligned_cols=211  Identities=21%  Similarity=0.273  Sum_probs=173.7

Q ss_pred             cccccccceecccCceEEEEEEe-cCCceEEEEEeecCC---CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEE
Q 039276           31 LFLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALI  106 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv  106 (263)
                      .+.|...+.||+|+||.||+|.. .+++.||+|++....   ......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus        15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv   94 (476)
T 2y94_A           15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV   94 (476)
T ss_dssp             ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            35699999999999999999994 479999999997542   23456788999999999999999999999999999999


Q ss_pred             EeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc----------------------
Q 039276          107 LECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI----------------------  164 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~----------------------  164 (263)
                      |||+++++|.+++...+. +++..+..++.|++.||+|||+++++||||||+||+.+.                      
T Consensus        95 ~E~~~gg~L~~~l~~~~~-l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~~  173 (476)
T 2y94_A           95 MEYVSGGELFDYICKNGR-LDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLR  173 (476)
T ss_dssp             EECCSSEEHHHHTTSSSS-CCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCCBC
T ss_pred             EeCCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchhhcccccccc
Confidence            999999999999976544 899999999999999999999999999999999999543                      


Q ss_pred             cccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccc
Q 039276          165 QTLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEH  231 (263)
Q Consensus       165 ~~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (263)
                      ...||+.|+||             |||||||++|+|++|+.||..... ...+...            ...        .
T Consensus       174 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~-~~~~~~i------------~~~--------~  232 (476)
T 2y94_A          174 TSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV-PTLFKKI------------CDG--------I  232 (476)
T ss_dssp             CCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS-HHHHHHH------------HTT--------C
T ss_pred             ccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH-HHHHHHH------------hcC--------C
Confidence            23578899999             999999999999999999864211 0111111            100        0


Q ss_pred             ccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          232 FMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       232 ~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ...+..+++++.+++.+||+.||++|||++||
T Consensus       233 ~~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~ei  264 (476)
T 2y94_A          233 FYTPQYLNPSVISLLKHMLQVDPMKRATIKDI  264 (476)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred             cCCCccCCHHHHHHHHHHcCCCchhCcCHHHH
Confidence            11233456679999999999999999999764

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=1.2e-38  Score=267.66  Aligned_cols=214  Identities=18%  Similarity=0.255  Sum_probs=172.4

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCCCc------hHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeE
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGG------AFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKA  104 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~------~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~  104 (263)
                      +.|+..+.||+|+||.||+|.. .+++.||+|.+......      ..+.+.+|+.+++.++||||+++++++.+....+
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   91 (321)
T 2a2a_A           12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVV   91 (321)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence            4699999999999999999994 46899999999765321      3567889999999999999999999999999999


Q ss_pred             EEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-------------------
Q 039276          105 LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-------------------  165 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-------------------  165 (263)
                      ++|||+++++|.+++.... .+++..++.++.|++.||+|||+++++|+||||+||+....                   
T Consensus        92 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~  170 (321)
T 2a2a_A           92 LILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE  170 (321)
T ss_dssp             EEECCCCSCBHHHHHHTCS-CEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECC
T ss_pred             EEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccceecC
Confidence            9999999999999997654 38999999999999999999999999999999999985322                   


Q ss_pred             -------ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccc
Q 039276          166 -------TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLS  226 (263)
Q Consensus       166 -------~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (263)
                             ..|++.|+||            |||||||++|+|++|+.||..... ...+........              
T Consensus       171 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-~~~~~~i~~~~~--------------  235 (321)
T 2a2a_A          171 DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK-QETLANITSVSY--------------  235 (321)
T ss_dssp             TTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH-HHHHHHHHTTCC--------------
T ss_pred             ccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCH-HHHHHHHHhccc--------------
Confidence                   2468889999            999999999999999999864211 011111111000              


Q ss_pred             cccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          227 REDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       227 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                        .........+++++.+++.+||+.||++|||++|+
T Consensus       236 --~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~  270 (321)
T 2a2a_A          236 --DFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEA  270 (321)
T ss_dssp             --CCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHH
T ss_pred             --ccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHH
Confidence              00001123456679999999999999999998764

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=1.4e-38  Score=262.52  Aligned_cols=214  Identities=17%  Similarity=0.256  Sum_probs=172.7

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEe
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      ++|+..+.||+|+||.||+|.. .+++.||+|++....  ....+.+.+|+.+++.++|+||+++++++.+.+..+++||
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   85 (284)
T 3kk8_A            6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD   85 (284)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             hhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEe
Confidence            4599999999999999999984 568999999997653  2345678889999999999999999999999999999999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------  165 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------  165 (263)
                      |+++++|.+++..... +++..+..++.|++.||+|||+++++|+||||+||+....                       
T Consensus        86 ~~~~~~l~~~~~~~~~-~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~  164 (284)
T 3kk8_A           86 LVTGGELFEDIVAREF-YSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW  164 (284)
T ss_dssp             CCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCBC
T ss_pred             cCCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCccc
Confidence            9999999998876554 8999999999999999999999999999999999996321                       


Q ss_pred             --ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccc
Q 039276          166 --TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEH  231 (263)
Q Consensus       166 --~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (263)
                        ..|++.|+||            ||||||+++++|++|+.||...... .........                .....
T Consensus       165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-~~~~~~~~~----------------~~~~~  227 (284)
T 3kk8_A          165 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH-RLYAQIKAG----------------AYDYP  227 (284)
T ss_dssp             CCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHT----------------CCCCC
T ss_pred             cCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh-HHHHHHHhc----------------cccCC
Confidence              2578889999            9999999999999999998542110 001100000                00000


Q ss_pred             ccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          232 FMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       232 ~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .+....+++++.+++.+||+.||++|||++|+
T Consensus       228 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~  259 (284)
T 3kk8_A          228 SPEWDTVTPEAKSLIDSMLTVNPKKRITADQA  259 (284)
T ss_dssp             TTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred             chhhcccCHHHHHHHHHHcccChhhCCCHHHH
Confidence            11223556779999999999999999999764

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=100.00  E-value=3.4e-38  Score=259.09  Aligned_cols=213  Identities=20%  Similarity=0.244  Sum_probs=175.4

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      ++|+..+.||+|+||.||+|.. .+++.||+|.+.... ....+.+.+|+.+++.++|+||+++++++.+.+..++++|+
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   86 (276)
T 2yex_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   86 (276)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEe
Confidence            4699999999999999999995 468999999997653 34457788999999999999999999999999999999999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-------------------------
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-------------------------  164 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-------------------------  164 (263)
                      +++++|.+++..... +++..++.++.|++.||+|||+++++|+||+|+||+.+.                         
T Consensus        87 ~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~  165 (276)
T 2yex_A           87 CSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN  165 (276)
T ss_dssp             CTTEEGGGGSBTTTB-CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBC
T ss_pred             cCCCcHHHHHhhccC-CCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhccc
Confidence            999999999976543 899999999999999999999999999999999999532                         


Q ss_pred             cccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccc
Q 039276          165 QTLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEH  231 (263)
Q Consensus       165 ~~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (263)
                      ...|+..|+||             ||||||+++++|++|+.||.........+..+......                  
T Consensus       166 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~------------------  227 (276)
T 2yex_A          166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY------------------  227 (276)
T ss_dssp             CCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTT------------------
T ss_pred             CCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccc------------------
Confidence            12467889999             99999999999999999997643333333332221100                  


Q ss_pred             ccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          232 FMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       232 ~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ......+++++.+++.+||+.||++|||++||
T Consensus       228 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~i  259 (276)
T 2yex_A          228 LNPWKKIDSAPLALLHKILVENPSARITIPDI  259 (276)
T ss_dssp             STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred             cCchhhcCHHHHHHHHHHCCCCchhCCCHHHH
Confidence            01123456679999999999999999999764

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=100.00  E-value=1.6e-38  Score=264.84  Aligned_cols=214  Identities=17%  Similarity=0.206  Sum_probs=170.4

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      .+|...+.||+|+||.||++.. .+++.||+|.+..........+.+|+.+++.++||||+++++++.+.+..+++|||+
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   88 (304)
T 2jam_A            9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLV   88 (304)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcC
Confidence            4699999999999999999994 468999999998765445567889999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccc---ccc---------------------c
Q 039276          111 PHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLT---QIQ---------------------T  166 (263)
Q Consensus       111 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~---~~~---------------------~  166 (263)
                      ++++|.+++...+. +++..++.++.|++.||+|||+++++|+||+|+||+.   +..                     .
T Consensus        89 ~~~~L~~~l~~~~~-~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~  167 (304)
T 2jam_A           89 SGGELFDRILERGV-YTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTA  167 (304)
T ss_dssp             CSCBHHHHHHHHSC-CCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTTHHH
T ss_pred             CCccHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCccccc
Confidence            99999999876544 8999999999999999999999999999999999996   211                     1


Q ss_pred             cccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccc
Q 039276          167 LATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT  234 (263)
Q Consensus       167 ~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (263)
                      .|++.|+||            |||||||++|+|++|+.||..... ...+........                ....+.
T Consensus       168 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-~~~~~~i~~~~~----------------~~~~~~  230 (304)
T 2jam_A          168 CGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE-SKLFEKIKEGYY----------------EFESPF  230 (304)
T ss_dssp             HSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH-HHHHHHHHHCCC----------------CCCTTT
T ss_pred             cCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-HHHHHHHHcCCC----------------CCCccc
Confidence            368889999            999999999999999999864211 011111111000                000112


Q ss_pred             hHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          235 KEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       235 ~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ...+++++.+++.+||+.||++|||++|+
T Consensus       231 ~~~~~~~~~~li~~~l~~dp~~Rps~~~~  259 (304)
T 2jam_A          231 WDDISESAKDFICHLLEKDPNERYTCEKA  259 (304)
T ss_dssp             TTTSCHHHHHHHHHHHCSSTTTSCCHHHH
T ss_pred             cccCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence            34566779999999999999999998764

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=1.1e-38  Score=267.68  Aligned_cols=231  Identities=21%  Similarity=0.269  Sum_probs=159.1

Q ss_pred             cccccccceecccCceEEEEEE-ecCCceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEe
Q 039276           31 LFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      ..+|+..+.||+|+||.||+|. ..+++.||+|.+.... ......+.+|+++++.++||||+++++++.+.+..++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   83 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE   83 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence            3569999999999999999998 4568999999997653 3345678899999999999999999999999999999999


Q ss_pred             ccCCCCHhhhhhhCC-----CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc------------------
Q 039276          109 CMPHGSLGKCLSTSN-----YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ------------------  165 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~------------------  165 (263)
                      |+++ +|.+++....     ..+++..+..++.|++.||+|||+++++||||||+||+.+..                  
T Consensus        84 ~~~~-~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~  162 (317)
T 2pmi_A           84 FMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPV  162 (317)
T ss_dssp             CCCC-BHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCC
T ss_pred             ecCC-CHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccceecCCCc
Confidence            9984 9999887532     238889999999999999999999999999999999995321                  


Q ss_pred             -----ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCC--Cchhhhhhh---
Q 039276          166 -----TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLP--NSVMKVVSA---  222 (263)
Q Consensus       166 -----~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~---  222 (263)
                           ..||+.|+||             |||||||++|||++|+.||..... ...+.........  .........   
T Consensus       163 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~  241 (317)
T 2pmi_A          163 NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTND-EEQLKLIFDIMGTPNESLWPSVTKLPK  241 (317)
T ss_dssp             CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHHHCSCCTTTCGGGGGCTT
T ss_pred             ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCCChhHhhhhhhhhh
Confidence                 2568889999             999999999999999999964321 1111111111110  000000000   


Q ss_pred             ---ccccccc------ccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          223 ---NLLSRED------EHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       223 ---~~~~~~~------~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                         .......      ........+++++.+++.+||+.||++|||++|+
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~  291 (317)
T 2pmi_A          242 YNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQA  291 (317)
T ss_dssp             CCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             cccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHH
Confidence               0000000      0001122456779999999999999999999764

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=1.7e-38  Score=259.64  Aligned_cols=211  Identities=20%  Similarity=0.293  Sum_probs=172.8

Q ss_pred             ccccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccC
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMP  111 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~  111 (263)
                      .+|+..+.||+|+||.||++...++..|++|.+..... ..+.+.+|+++++.++||||+++++++.+.+..+++||+++
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   86 (267)
T 3t9t_A            8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFME   86 (267)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCT
T ss_pred             hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCC
Confidence            45999999999999999999987788999999986643 34678899999999999999999999999889999999999


Q ss_pred             CCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc------------------------cc
Q 039276          112 HGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ------------------------TL  167 (263)
Q Consensus       112 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~------------------------~~  167 (263)
                      +++|.+++......+++..++.++.|++.||+|||+++++|+||+|+||+.+..                        ..
T Consensus        87 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~  166 (267)
T 3t9t_A           87 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK  166 (267)
T ss_dssp             TCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTT
T ss_pred             CCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEccccccccccccccccccccc
Confidence            999999998766568999999999999999999999999999999999995432                        13


Q ss_pred             ccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccc
Q 039276          168 ATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT  234 (263)
Q Consensus       168 g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (263)
                      ++..|+||            ||||||+++|+|++ |+.||...... ........             .      .+...
T Consensus       167 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-~~~~~i~~-------------~------~~~~~  226 (267)
T 3t9t_A          167 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS-EVVEDIST-------------G------FRLYK  226 (267)
T ss_dssp             CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-HHHHHHHT-------------T------CCCCC
T ss_pred             ccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH-HHHHHHhc-------------C------CcCCC
Confidence            45679999            99999999999999 89998642110 00110000             0      01112


Q ss_pred             hHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          235 KEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       235 ~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +..+++++.+++.+||+.||++|||++++
T Consensus       227 ~~~~~~~l~~li~~~l~~~p~~Rps~~~l  255 (267)
T 3t9t_A          227 PRLASTHVYQIMNHCWRERPEDRPAFSRL  255 (267)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             CccCcHHHHHHHHHHccCChhhCcCHHHH
Confidence            33456679999999999999999999764

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=2.6e-38  Score=268.11  Aligned_cols=211  Identities=18%  Similarity=0.279  Sum_probs=169.6

Q ss_pred             cccccceecccCceEEEEEEecCCceEEEEEeecCCC--chHHHHHHHHHHHhhcCC--CcceeEeeEeecCCeeEEEEe
Q 039276           33 LFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYG--GAFKNLDVECNMMKIIRH--QNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~--~~~~~~~~e~~~l~~~~h--~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      .|+..+.||+|+||.||++...+++.||+|++.....  ...+.+.+|+++++.++|  +||+++++++.+....+++||
T Consensus        10 ~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e   89 (343)
T 3dbq_A           10 IYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME   89 (343)
T ss_dssp             EEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC
T ss_pred             EEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe
Confidence            4999999999999999999987799999999976532  345678899999999976  999999999999999999999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc------------------------
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI------------------------  164 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~------------------------  164 (263)
                       +.+++|.+++..... +++..+..++.|++.||+|||+++++||||||+||+...                        
T Consensus        90 -~~~~~L~~~l~~~~~-~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~~~~~kl~DFG~a~~~~~~~~~~~~~  167 (343)
T 3dbq_A           90 -CGNIDLNSWLKKKKS-IDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKD  167 (343)
T ss_dssp             -CCSEEHHHHHHHSCC-CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTEEEECCCSSSCCC----------
T ss_pred             -CCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEECCcEEEeecccccccCcccccccCC
Confidence             567899999987554 899999999999999999999999999999999999421                        


Q ss_pred             cccccccccCc-----------------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhh
Q 039276          165 QTLATISYMAP-----------------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVS  221 (263)
Q Consensus       165 ~~~g~~~y~aP-----------------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (263)
                      ...||+.|+||                       |||||||++|||++|+.||.........+.....            
T Consensus       168 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~------------  235 (343)
T 3dbq_A          168 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID------------  235 (343)
T ss_dssp             --CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHC------------
T ss_pred             CCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhc------------
Confidence            23578999998                       9999999999999999998643221111111111            


Q ss_pred             hcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          222 ANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ..      .....+...++++.+++.+||+.||++|||+.|+
T Consensus       236 ~~------~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~  271 (343)
T 3dbq_A          236 PN------HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPEL  271 (343)
T ss_dssp             TT------SCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred             CC------cccCCcccCCHHHHHHHHHHcCCChhHCCCHHHH
Confidence            00      0111223344568999999999999999999764

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=2.4e-38  Score=281.37  Aligned_cols=215  Identities=19%  Similarity=0.203  Sum_probs=171.1

Q ss_pred             cccccccceecccCceEEEEEEe-cCCceEEEEEeecCCC-------------chHHHHHHHHHHHhhcCCCcceeEeeE
Q 039276           31 LFLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYG-------------GAFKNLDVECNMMKIIRHQNLIKIISS   96 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~-------------~~~~~~~~e~~~l~~~~h~~i~~~~~~   96 (263)
                      ..+|...+.||+|+||.||+|.. .++..||+|++.....             .....+.+|+.+++.++||||++++++
T Consensus        35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~  114 (504)
T 3q5i_A           35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV  114 (504)
T ss_dssp             GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence            35799999999999999999994 4688999999976421             235678899999999999999999999


Q ss_pred             eecCCeeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------
Q 039276           97 CSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------  165 (263)
Q Consensus        97 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------  165 (263)
                      +.+....++||||+++++|.+++..... +++..+..++.|++.||+|||+++++||||||+||+....           
T Consensus       115 ~~~~~~~~lv~e~~~gg~L~~~l~~~~~-~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Df  193 (504)
T 3q5i_A          115 FEDKKYFYLVTEFYEGGELFEQIINRHK-FDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDF  193 (504)
T ss_dssp             EECSSEEEEEEECCTTCBHHHHHHHHSC-CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECCC
T ss_pred             EEcCCEEEEEEecCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEEC
Confidence            9999999999999999999999876544 8999999999999999999999999999999999995422           


Q ss_pred             --------------ccccccccCc-----------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhh
Q 039276          166 --------------TLATISYMAP-----------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVV  220 (263)
Q Consensus       166 --------------~~g~~~y~aP-----------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (263)
                                    ..||+.|+||           |||||||++|+|++|..||...... ..+......          
T Consensus       194 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~i~~~----------  262 (504)
T 3q5i_A          194 GLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ-DIIKKVEKG----------  262 (504)
T ss_dssp             TTCEECCTTSCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHC----------
T ss_pred             CCCEEcCCCCccccccCCcCCCCHHHhccCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHcC----------
Confidence                          2578999999           9999999999999999998642111 111111110          


Q ss_pred             hhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          221 SANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                            ......+....+++++.+++.+||+.||.+|||++|+
T Consensus       263 ------~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~  299 (504)
T 3q5i_A          263 ------KYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEA  299 (504)
T ss_dssp             ------CCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred             ------CCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHH
Confidence                  0000011124567789999999999999999999764

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=1.8e-38  Score=267.14  Aligned_cols=210  Identities=20%  Similarity=0.295  Sum_probs=164.8

Q ss_pred             ccccccceecccCceEEEEEEec-CCceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecCC--------
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ-DGMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDD--------  101 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~-~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--------  101 (263)
                      .+|+..+.||+|+||.||+|... +++.||||++.... ....+.+.+|+.+++.++||||+++++++.+..        
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   85 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEM   85 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHH
T ss_pred             hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhh
Confidence            45999999999999999999954 79999999997653 345677899999999999999999999885432        


Q ss_pred             -------------------------------------------------eeEEEEeccCCCCHhhhhhhCCCc--ccHHH
Q 039276          102 -------------------------------------------------FKALILECMPHGSLGKCLSTSNYI--LDFFQ  130 (263)
Q Consensus       102 -------------------------------------------------~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~  130 (263)
                                                                       ..+++|||+++++|.+++......  .++..
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~  165 (332)
T 3qd2_B           86 DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGV  165 (332)
T ss_dssp             HC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHH
T ss_pred             hhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHH
Confidence                                                             379999999999999999865432  55667


Q ss_pred             HHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------------------ccccccccCc
Q 039276          131 RLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------------------TLATISYMAP  175 (263)
Q Consensus       131 ~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------------------~~g~~~y~aP  175 (263)
                      ++.++.|++.||+|||+++++||||||+||+.+..                                   ..||+.|+||
T Consensus       166 ~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  245 (332)
T 3qd2_B          166 CLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSP  245 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCH
T ss_pred             HHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccCh
Confidence            88999999999999999999999999999995421                                   2488999999


Q ss_pred             ------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHHHHHHHH
Q 039276          176 ------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVF  243 (263)
Q Consensus       176 ------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  243 (263)
                                  |||||||++|||++|..|+....       ....         ....      ..........++++.
T Consensus       246 E~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~-------~~~~---------~~~~------~~~~~~~~~~~~~~~  303 (332)
T 3qd2_B          246 EQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERV-------RIIT---------DVRN------LKFPLLFTQKYPQEH  303 (332)
T ss_dssp             HHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHH-------HHHH---------HHHT------TCCCHHHHHHCHHHH
T ss_pred             HHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHH-------HHHH---------Hhhc------cCCCcccccCChhHH
Confidence                        99999999999999988743210       0000         0000      000112345566789


Q ss_pred             HhhccccccCcCCCCCccCC
Q 039276          244 NLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       244 ~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +++.+||+.||++|||++|+
T Consensus       304 ~li~~~l~~~p~~Rps~~~~  323 (332)
T 3qd2_B          304 MMVQDMLSPSPTERPEATDI  323 (332)
T ss_dssp             HHHHHHHCSSGGGSCCHHHH
T ss_pred             HHHHHHccCCCCcCCCHHHH
Confidence            99999999999999999864

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=100.00  E-value=1.3e-38  Score=260.91  Aligned_cols=210  Identities=22%  Similarity=0.354  Sum_probs=165.7

Q ss_pred             ccccccceecccCceEEEEEEecCCceEEEEEeecCCC----chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYG----GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~----~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      .+|+..+.||+|+||.||+|... +..+|+|++.....    ...+.+.+|+++++.++||||+++++++.+.+..+++|
T Consensus         7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   85 (271)
T 3dtc_A            7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM   85 (271)
T ss_dssp             TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred             hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence            45999999999999999999876 88999999876532    23567888999999999999999999999999999999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCC---ccccccCCCcccccc--------------------
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGH---STHLLLKEDQSLTQI--------------------  164 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~h~dlk~~nil~~~--------------------  164 (263)
                      ||+++++|.+++...  .+++..++.++.|++.||+|||+++   ++|+||||+||+...                    
T Consensus        86 e~~~~~~L~~~~~~~--~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~  163 (271)
T 3dtc_A           86 EFARGGPLNRVLSGK--RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA  163 (271)
T ss_dssp             ECCTTEEHHHHHTSS--CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC-
T ss_pred             EcCCCCCHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcc
Confidence            999999999998643  4899999999999999999999999   889999999999642                    


Q ss_pred             ---------cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhc
Q 039276          165 ---------QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSAN  223 (263)
Q Consensus       165 ---------~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (263)
                               ...|++.|+||            ||||||+++++|++|+.||...........             ...  
T Consensus       164 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~-------------~~~--  228 (271)
T 3dtc_A          164 REWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYG-------------VAM--  228 (271)
T ss_dssp             ------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHH-------------HHT--
T ss_pred             cccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHh-------------hhc--
Confidence                     12468889999            999999999999999999864311110000             000  


Q ss_pred             ccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          224 LLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                          .....+.+..+++++.+++.+||+.||++|||+.||
T Consensus       229 ----~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~  264 (271)
T 3dtc_A          229 ----NKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNI  264 (271)
T ss_dssp             ----SCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             ----CCCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHH
Confidence                001112244566779999999999999999999864

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=100.00  E-value=1.3e-38  Score=268.10  Aligned_cols=228  Identities=19%  Similarity=0.259  Sum_probs=175.7

Q ss_pred             cccccccceecccCceEEEEEEe-----cCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEee--cCCee
Q 039276           31 LFLFSESNLISRGGFGSIYKAKI-----QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCS--KDDFK  103 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~-----~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~--~~~~~  103 (263)
                      ..+|+..+.||+|+||.||++..     .+++.||+|.+........+.+.+|+++++.++|+||+++++++.  +....
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~  101 (327)
T 3lxl_A           22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL  101 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred             hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence            35699999999999999999983     358899999998776666677899999999999999999999886  45678


Q ss_pred             EEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc------------------
Q 039276          104 ALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ------------------  165 (263)
Q Consensus       104 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~------------------  165 (263)
                      ++||||+++++|.+++......+++..++.++.|++.||+|||+++++|+||||+||+.+..                  
T Consensus       102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~  181 (327)
T 3lxl_A          102 RLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK  181 (327)
T ss_dssp             EEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGGGCEECCTTC
T ss_pred             EEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEcccccceecccCC
Confidence            99999999999999998755558999999999999999999999999999999999995321                  


Q ss_pred             --------ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccc
Q 039276          166 --------TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLL  225 (263)
Q Consensus       166 --------~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (263)
                              ..|+..|+||            |||||||++++|++|+.||.......  ...+............... . 
T Consensus       182 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~-  257 (327)
T 3lxl_A          182 DYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEF--LRMMGCERDVPALSRLLEL-L-  257 (327)
T ss_dssp             SEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHH--HHHCC----CCHHHHHHHH-H-
T ss_pred             ccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchh--hhhcccccccccHHHHHHH-h-
Confidence                    2356669999            99999999999999999986431110  0000000000000111100 0 


Q ss_pred             ccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          226 SREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       226 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                       ....+.+.+..+++++.+++.+||+.||++|||++||
T Consensus       258 -~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~el  294 (327)
T 3lxl_A          258 -EEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSAL  294 (327)
T ss_dssp             -HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             -hcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHH
Confidence             1111223355677889999999999999999999864

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=1.6e-38  Score=268.93  Aligned_cols=212  Identities=23%  Similarity=0.347  Sum_probs=171.3

Q ss_pred             ccccccceecccCceEEEEEEec------CCceEEEEEeecCCC-chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ------DGMEVVVKGFNLQYG-GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKA  104 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~------~~~~v~vK~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~  104 (263)
                      .+|+..+.||+|+||.||+|...      +++.||+|.+..... .....+.+|+.+++.++||||+++++++.+.+..+
T Consensus        47 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~  126 (343)
T 1luf_A           47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMC  126 (343)
T ss_dssp             GGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCE
T ss_pred             HHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceE
Confidence            46999999999999999999854      347899999986533 34567889999999999999999999999999999


Q ss_pred             EEEeccCCCCHhhhhhhCC-----------------------CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccc
Q 039276          105 LILECMPHGSLGKCLSTSN-----------------------YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSL  161 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~-----------------------~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil  161 (263)
                      ++|||+++++|.+++....                       ..+++..++.++.|++.||+|||+++++|+||||+||+
T Consensus       127 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl  206 (343)
T 1luf_A          127 LLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCL  206 (343)
T ss_dssp             EEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred             EEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEE
Confidence            9999999999999997632                       34888999999999999999999999999999999999


Q ss_pred             cccc-------------------------ccccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCch
Q 039276          162 TQIQ-------------------------TLATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMT  203 (263)
Q Consensus       162 ~~~~-------------------------~~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~  203 (263)
                      .+..                         ..+++.|+||            |||||||++|||++ |..||......  .
T Consensus       207 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~--~  284 (343)
T 1luf_A          207 VGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHE--E  284 (343)
T ss_dssp             ECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--H
T ss_pred             ECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChH--H
Confidence            5432                         2356779999            99999999999999 99998642111  1


Q ss_pred             hhhHhhhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          204 LKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +.....           ..       .....+..+++++.+++.+||+.||++|||+.+|
T Consensus       285 ~~~~~~-----------~~-------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~  326 (343)
T 1luf_A          285 VIYYVR-----------DG-------NILACPENCPLELYNLMRLCWSKLPADRPSFCSI  326 (343)
T ss_dssp             HHHHHH-----------TT-------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             HHHHHh-----------CC-------CcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHH
Confidence            100000           00       0011234566779999999999999999998764

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=1.1e-38  Score=279.97  Aligned_cols=211  Identities=20%  Similarity=0.341  Sum_probs=172.1

Q ss_pred             cccccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           31 LFLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      ..+|...+.||+|+||.||+|...++..||||.+.... ...+.+.+|+.+++.++||||+++++++. .+..++||||+
T Consensus       187 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~  264 (454)
T 1qcf_A          187 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFM  264 (454)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCC
T ss_pred             hHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeec
Confidence            35689999999999999999998878999999998653 45678899999999999999999999986 55689999999


Q ss_pred             CCCCHhhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc------------------------
Q 039276          111 PHGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ------------------------  165 (263)
Q Consensus       111 ~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~------------------------  165 (263)
                      ++|+|.+++.... ..++...+..++.|++.||+|||+++++||||||+||+.+..                        
T Consensus       265 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~  344 (454)
T 1qcf_A          265 AKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREG  344 (454)
T ss_dssp             TTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCS
T ss_pred             CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCC
Confidence            9999999997542 237888999999999999999999999999999999995432                        


Q ss_pred             ccccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccc
Q 039276          166 TLATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHF  232 (263)
Q Consensus       166 ~~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (263)
                      ..++..|+||            |||||||++|||++ |+.||......  ..            ...+..      ..+.
T Consensus       345 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~--~~------------~~~i~~------~~~~  404 (454)
T 1qcf_A          345 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP--EV------------IRALER------GYRM  404 (454)
T ss_dssp             SSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HH------------HHHHHH------TCCC
T ss_pred             CcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH--HH------------HHHHHc------CCCC
Confidence            1245679999            99999999999999 99998642111  00            011111      1122


Q ss_pred             cchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          233 MTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       233 ~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +.+..+++++.+++.+||+.||++|||+++|
T Consensus       405 ~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i  435 (454)
T 1qcf_A          405 PRPENCPEELYNIMMRCWKNRPEERPTFEYI  435 (454)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             CCCCCCCHHHHHHHHHHccCChhHCcCHHHH
Confidence            3355677889999999999999999998764

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=6.5e-39  Score=277.37  Aligned_cols=214  Identities=17%  Similarity=0.186  Sum_probs=171.6

Q ss_pred             cccccccceecccCceEEEEEEe-cCCceEEEEEeecC---CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEE
Q 039276           31 LFLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQ---YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALI  106 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv  106 (263)
                      ..+|+..+.||+|+||.||++.. .+++.||+|++...   .......+.+|+.+++.++||||+++++++.+....|+|
T Consensus        68 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV  147 (410)
T 3v8s_A           68 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMV  147 (410)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEE
Confidence            35699999999999999999994 46889999999753   122344577899999999999999999999999999999


Q ss_pred             EeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc----------------------
Q 039276          107 LECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI----------------------  164 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~----------------------  164 (263)
                      |||+++|+|.+++...  .+++..+..++.|++.||+|||+++++||||||+||+++.                      
T Consensus       148 ~E~~~gg~L~~~l~~~--~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~~  225 (410)
T 3v8s_A          148 MEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVR  225 (410)
T ss_dssp             ECCCTTEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSEEE
T ss_pred             EeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEeeccCCccc
Confidence            9999999999999764  3889999999999999999999999999999999999532                      


Q ss_pred             --cccccccccCc----------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccc
Q 039276          165 --QTLATISYMAP----------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLS  226 (263)
Q Consensus       165 --~~~g~~~y~aP----------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (263)
                        ...||+.|+||                |||||||++|||++|+.||..... ...+...            ..    .
T Consensus       226 ~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~-~~~~~~i------------~~----~  288 (410)
T 3v8s_A          226 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL-VGTYSKI------------MN----H  288 (410)
T ss_dssp             CCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSH-HHHHHHH------------HT----H
T ss_pred             ccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCCh-hhHHHHH------------Hh----c
Confidence              23589999999                999999999999999999863210 0111111            11    0


Q ss_pred             cccccccchHHHHHHHHHhhccccccCcCC--CCCccCC
Q 039276          227 REDEHFMTKEQCMSFVFNLAMECTVESPNQ--RINAKEM  263 (263)
Q Consensus       227 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~--Rpt~~ev  263 (263)
                      .....++....+++++.+++.+||+.+|.+  ||+++||
T Consensus       289 ~~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei  327 (410)
T 3v8s_A          289 KNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEI  327 (410)
T ss_dssp             HHHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHH
T ss_pred             cccccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHH
Confidence            111112223356778999999999988888  9998764

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=9e-39  Score=263.19  Aligned_cols=211  Identities=23%  Similarity=0.292  Sum_probs=171.7

Q ss_pred             cccccccceecccCceEEEEEE-ecCCceEEEEEeecCC---CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEE
Q 039276           31 LFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALI  106 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv  106 (263)
                      .++|+..+.||+|+||.||+|. ..++..||+|++....   ......+.+|+.+++.++||||+++++++.+.+..+++
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   87 (279)
T 3fdn_A            8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI   87 (279)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence            3569999999999999999998 4557899999996542   22356688899999999999999999999999999999


Q ss_pred             EeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc---------------------
Q 039276          107 LECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ---------------------  165 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~---------------------  165 (263)
                      |||+++++|.+++..... +++..+..++.|++.||+|||.++++|+||+|+||+.+..                     
T Consensus        88 ~e~~~~~~l~~~l~~~~~-~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~  166 (279)
T 3fdn_A           88 LEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTD  166 (279)
T ss_dssp             ECCCTTEEHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC-------
T ss_pred             EecCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccccccCCcccccc
Confidence            999999999999976554 8999999999999999999999999999999999995432                     


Q ss_pred             ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccccc
Q 039276          166 TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFM  233 (263)
Q Consensus       166 ~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (263)
                      ..|++.|+||            ||||||+++++|++|+.||...... ......             ..       ....
T Consensus       167 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~~-------------~~-------~~~~  225 (279)
T 3fdn_A          167 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ-ETYKRI-------------SR-------VEFT  225 (279)
T ss_dssp             -CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHH-------------HH-------TCCC
T ss_pred             cCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH-HHHHHH-------------Hh-------CCCC
Confidence            2578889999            9999999999999999998632110 000000             00       0111


Q ss_pred             chHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          234 TKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       234 ~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .+..+++++.+++.+||+.||++|||++||
T Consensus       226 ~~~~~~~~~~~li~~~l~~~p~~Rps~~e~  255 (279)
T 3fdn_A          226 FPDFVTEGARDLISRLLKHNPSQRPMLREV  255 (279)
T ss_dssp             CCTTSCHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred             CCCcCCHHHHHHHHHHhccChhhCCCHHHH
Confidence            234456779999999999999999999864

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=100.00  E-value=4.2e-38  Score=261.89  Aligned_cols=227  Identities=19%  Similarity=0.353  Sum_probs=171.2

Q ss_pred             ccccccceecccCceEEEEEEe-----cCCceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecC--Cee
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-----QDGMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKD--DFK  103 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-----~~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~--~~~  103 (263)
                      ..|+..+.||+|+||.||+|.+     .+++.||+|.+.... ....+.+.+|+++++.++|+||+++++++.+.  ...
T Consensus        21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~  100 (302)
T 4e5w_A           21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI  100 (302)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred             hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence            4589999999999999999983     358899999997553 34557788999999999999999999999766  668


Q ss_pred             EEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc------------------
Q 039276          104 ALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ------------------  165 (263)
Q Consensus       104 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~------------------  165 (263)
                      +++|||+++++|.+++......+++..++.++.|++.||+|||+++++|+||||+||+.+..                  
T Consensus       101 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~  180 (302)
T 4e5w_A          101 KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK  180 (302)
T ss_dssp             EEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTC
T ss_pred             EEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECcccccccccCCC
Confidence            99999999999999997665568999999999999999999999999999999999995321                  


Q ss_pred             --------ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccc
Q 039276          166 --------TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLL  225 (263)
Q Consensus       166 --------~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (263)
                              ..||..|+||            |||||||++++|++|..|+......   +.................... 
T Consensus       181 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-  256 (302)
T 4e5w_A          181 EYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMAL---FLKMIGPTHGQMTVTRLVNTL-  256 (302)
T ss_dssp             CEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHH---HHHHHCSCCGGGHHHHHHHHH-
T ss_pred             cceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhH---HhhccCCcccccCHHHHHHHH-
Confidence                    2456669999            9999999999999999996532100   000000000000000011100 


Q ss_pred             ccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          226 SREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       226 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                       ....+.+.+..+++++.+++.+||+.||++|||+++|
T Consensus       257 -~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l  293 (302)
T 4e5w_A          257 -KEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNL  293 (302)
T ss_dssp             -HTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHH
T ss_pred             -hccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHH
Confidence             1111223345677889999999999999999999764

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=1.2e-38  Score=271.48  Aligned_cols=213  Identities=21%  Similarity=0.329  Sum_probs=169.0

Q ss_pred             ccccccceecccCceEEEEEEe------cCCceEEEEEeecCCC-chHHHHHHHHHHHhhc-CCCcceeEeeEeecCC-e
Q 039276           32 FLFSESNLISRGGFGSIYKAKI------QDGMEVVVKGFNLQYG-GAFKNLDVECNMMKII-RHQNLIKIISSCSKDD-F  102 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~------~~~~~v~vK~~~~~~~-~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~-~  102 (263)
                      .+|+..+.||+|+||.||+|.+      .+++.||||.+..... ...+.+.+|+++++.+ +||||+++++++.+.+ .
T Consensus        22 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~  101 (359)
T 3vhe_A           22 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP  101 (359)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSC
T ss_pred             cceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCc
Confidence            5699999999999999999973      2357899999976533 3456788999999999 7899999999987654 5


Q ss_pred             eEEEEeccCCCCHhhhhhhCCC----------------------------------------------------------
Q 039276          103 KALILECMPHGSLGKCLSTSNY----------------------------------------------------------  124 (263)
Q Consensus       103 ~~lv~e~~~~~~L~~~l~~~~~----------------------------------------------------------  124 (263)
                      .+++|||+++|+|.+++.....                                                          
T Consensus       102 ~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (359)
T 3vhe_A          102 LMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEA  181 (359)
T ss_dssp             CEEEEECCTTEEHHHHHHTTTTSBCSCC----------------------------------------------------
T ss_pred             eEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhccc
Confidence            8999999999999999976432                                                          


Q ss_pred             -------cccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-------------------------ccccccc
Q 039276          125 -------ILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-------------------------TLATISY  172 (263)
Q Consensus       125 -------~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-------------------------~~g~~~y  172 (263)
                             .+++..++.++.|++.||+|||+++++||||||+||+.+..                         ..||+.|
T Consensus       182 ~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y  261 (359)
T 3vhe_A          182 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKW  261 (359)
T ss_dssp             --CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGG
T ss_pred             ccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCcee
Confidence                   17888999999999999999999999999999999995421                         2356779


Q ss_pred             cCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHHHH
Q 039276          173 MAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCM  239 (263)
Q Consensus       173 ~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (263)
                      +||            |||||||++|||++ |+.||...............                   ......+..++
T Consensus       262 ~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~  322 (359)
T 3vhe_A          262 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE-------------------GTRMRAPDYTT  322 (359)
T ss_dssp             CCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHH-------------------TCCCCCCTTCC
T ss_pred             EChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHc-------------------CCCCCCCCCCC
Confidence            999            99999999999998 99998643222111111110                   01111234456


Q ss_pred             HHHHHhhccccccCcCCCCCccCC
Q 039276          240 SFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       240 ~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +++.+++.+||+.||++|||++||
T Consensus       323 ~~l~~li~~~l~~dP~~Rps~~el  346 (359)
T 3vhe_A          323 PEMYQTMLDCWHGEPSQRPTFSEL  346 (359)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             HHHHHHHHHHccCChhhCCCHHHH
Confidence            779999999999999999999864

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=2.2e-38  Score=264.72  Aligned_cols=230  Identities=19%  Similarity=0.203  Sum_probs=169.6

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCCCc--hHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEe
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGG--AFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~--~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      ++|+..+.||+|+||.||+|.. .+++.||+|++......  ..+.+.+|+++++.++|+||+++++++.+.+..++|||
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE   82 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence            4599999999999999999995 45899999998665332  35567789999999999999999999999999999999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-----------------------c
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-----------------------Q  165 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-----------------------~  165 (263)
                      |+++++|.+++..... +++..+..++.|++.||+|||+++++|+||||+||+.+.                       .
T Consensus        83 ~~~~~~l~~~~~~~~~-~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  161 (311)
T 4agu_A           83 YCDHTVLHELDRYQRG-VPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDD  161 (311)
T ss_dssp             CCSEEHHHHHHHTSSC-CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC--------
T ss_pred             eCCCchHHHHHhhhcC-CCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccccCC
Confidence            9999999988875544 899999999999999999999999999999999999542                       1


Q ss_pred             ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCC--Cchhhhhhhc------c
Q 039276          166 TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLP--NSVMKVVSAN------L  224 (263)
Q Consensus       166 ~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~------~  224 (263)
                      ..|+..|+||             |||||||++++|++|+.||......+. ..........  ..........      .
T Consensus       162 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (311)
T 4agu_A          162 EVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQ-LYLIRKTLGDLIPRHQQVFSTNQYFSGVK  240 (311)
T ss_dssp             ----GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCSCCHHHHHHHHTCGGGTTCC
T ss_pred             CcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhcccccccccccccccccccCc
Confidence            2467889999             999999999999999999964321111 1111110000  0000000000      0


Q ss_pred             ccccc---ccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          225 LSRED---EHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       225 ~~~~~---~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .+...   ........+++++.+++.+||+.||++|||++|+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el  282 (311)
T 4agu_A          241 IPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQL  282 (311)
T ss_dssp             CCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHH
T ss_pred             CCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHH
Confidence            00000   0000113567779999999999999999999764

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=2.3e-38  Score=275.23  Aligned_cols=214  Identities=19%  Similarity=0.196  Sum_probs=166.2

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCC--------CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCe
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY--------GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDF  102 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~--------~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~  102 (263)
                      .+|...+.||+|+||.||+|. ..+++.||+|++....        ......+.+|++++++++||||+++++++.. +.
T Consensus       135 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~  213 (419)
T 3i6u_A          135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-ED  213 (419)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-SE
T ss_pred             ccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-Cc
Confidence            569999999999999999998 4568999999997642        1122347789999999999999999999754 45


Q ss_pred             eEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc------------------
Q 039276          103 KALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI------------------  164 (263)
Q Consensus       103 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~------------------  164 (263)
                      .++||||+++++|.+++..... +++..++.++.|++.||+|||+++++||||||+||+...                  
T Consensus       214 ~~lv~e~~~~g~L~~~l~~~~~-~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~  292 (419)
T 3i6u_A          214 YYIVLELMEGGELFDKVVGNKR-LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL  292 (419)
T ss_dssp             EEEEEECCTTCBGGGGTSSSCC-CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTSC
T ss_pred             eEEEEEcCCCCcHHHHHhccCC-CCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecccceec
Confidence            7999999999999999876544 899999999999999999999999999999999999632                  


Q ss_pred             -------cccccccccCc---------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhh
Q 039276          165 -------QTLATISYMAP---------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSA  222 (263)
Q Consensus       165 -------~~~g~~~y~aP---------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (263)
                             ...||+.|+||               |||||||++|+|++|+.||...................         
T Consensus       293 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~---------  363 (419)
T 3i6u_A          293 GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN---------  363 (419)
T ss_dssp             C-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCC---------
T ss_pred             CCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCC---------
Confidence                   12478899999               99999999999999999997542222211111110000         


Q ss_pred             cccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          223 NLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                             ........+++++.+++.+||+.||++|||++|+
T Consensus       364 -------~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~  397 (419)
T 3i6u_A          364 -------FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEA  397 (419)
T ss_dssp             -------CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred             -------CCchhhcccCHHHHHHHHHHccCChhHCcCHHHH
Confidence                   0001123456779999999999999999998763

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=100.00  E-value=3.2e-38  Score=263.73  Aligned_cols=213  Identities=21%  Similarity=0.318  Sum_probs=171.5

Q ss_pred             ccccccceecccCceEEEEEEe------cCCceEEEEEeecCCC-chHHHHHHHHHHHhhc-CCCcceeEeeEeecCCee
Q 039276           32 FLFSESNLISRGGFGSIYKAKI------QDGMEVVVKGFNLQYG-GAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFK  103 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~------~~~~~v~vK~~~~~~~-~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~  103 (263)
                      .+|...+.||+|+||.||+|..      .+++.||+|.+..... ...+.+.+|+.+++.+ +||||+++++++.+.+..
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~  102 (313)
T 1t46_A           23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPT  102 (313)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             hhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCc
Confidence            4599999999999999999984      2467899999986543 3457788999999999 999999999999999999


Q ss_pred             EEEEeccCCCCHhhhhhhCCC-----------------cccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-
Q 039276          104 ALILECMPHGSLGKCLSTSNY-----------------ILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-  165 (263)
Q Consensus       104 ~lv~e~~~~~~L~~~l~~~~~-----------------~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-  165 (263)
                      +++|||+++++|.+++.....                 .+++..++.++.|++.||+|||+++++|+||||+||+.+.. 
T Consensus       103 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~  182 (313)
T 1t46_A          103 LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGR  182 (313)
T ss_dssp             EEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTT
T ss_pred             EEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEcCCC
Confidence            999999999999999976542                 27899999999999999999999999999999999995322 


Q ss_pred             ------------------------ccccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHh
Q 039276          166 ------------------------TLATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWV  208 (263)
Q Consensus       166 ------------------------~~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~  208 (263)
                                              ..+++.|+||            |||||||++++|++ |+.||........ +....
T Consensus       183 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~-~~~~~  261 (313)
T 1t46_A          183 ITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK-FYKMI  261 (313)
T ss_dssp             EEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH-HHHHH
T ss_pred             CEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhH-HHHHh
Confidence                                    1245679999            99999999999999 9999865322211 11111


Q ss_pred             hhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          209 NDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                                  ....      +...+..+++++.+++.+||+.||.+|||++||
T Consensus       262 ------------~~~~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el  298 (313)
T 1t46_A          262 ------------KEGF------RMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQI  298 (313)
T ss_dssp             ------------HHTC------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             ------------ccCC------CCCCcccCCHHHHHHHHHHcCCCchhCcCHHHH
Confidence                        1110      111234556779999999999999999999864

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=2.4e-38  Score=269.12  Aligned_cols=208  Identities=15%  Similarity=0.182  Sum_probs=170.6

Q ss_pred             cccccccceecccCceEEEEEEec-CCceEEEEEeecC---CCchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCeeEE
Q 039276           31 LFLFSESNLISRGGFGSIYKAKIQ-DGMEVVVKGFNLQ---YGGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFKAL  105 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~~-~~~~v~vK~~~~~---~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~l  105 (263)
                      ..+|+..+.||+|+||.||++... +++.||+|++...   .......+..|..++..+ +||+|+++++++.+.+..|+
T Consensus        19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l   98 (353)
T 2i0e_A           19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF   98 (353)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence            356999999999999999999954 4889999999764   233456678899999887 79999999999999999999


Q ss_pred             EEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc---------------------
Q 039276          106 ILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI---------------------  164 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~---------------------  164 (263)
                      ||||+++|+|.+++...+. +++..++.++.|++.||+|||+++++||||||+||+++.                     
T Consensus        99 v~E~~~gg~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~  177 (353)
T 2i0e_A           99 VMEYVNGGDLMYHIQQVGR-FKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT  177 (353)
T ss_dssp             EEECCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCC
T ss_pred             EEeCCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCcccccccCCcc
Confidence            9999999999999986554 899999999999999999999999999999999999532                     


Q ss_pred             --cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccc
Q 039276          165 --QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDE  230 (263)
Q Consensus       165 --~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (263)
                        ...||+.|+||            |||||||++|||++|+.||..... ...+.....            .        
T Consensus       178 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~-~~~~~~i~~------------~--------  236 (353)
T 2i0e_A          178 TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-DELFQSIME------------H--------  236 (353)
T ss_dssp             BCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHH------------C--------
T ss_pred             cccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH-HHHHHHHHh------------C--------
Confidence              22579999999            999999999999999999864211 011111111            0        


Q ss_pred             cccchHHHHHHHHHhhccccccCcCCCCCc
Q 039276          231 HFMTKEQCMSFVFNLAMECTVESPNQRINA  260 (263)
Q Consensus       231 ~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~  260 (263)
                      ....+..+++++.+++.+||+.||++||++
T Consensus       237 ~~~~p~~~s~~~~~li~~lL~~dP~~R~~~  266 (353)
T 2i0e_A          237 NVAYPKSMSKEAVAICKGLMTKHPGKRLGC  266 (353)
T ss_dssp             CCCCCTTSCHHHHHHHHHHTCSCTTSCTTC
T ss_pred             CCCCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence            011234567789999999999999999975

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=2e-38  Score=278.09  Aligned_cols=210  Identities=22%  Similarity=0.330  Sum_probs=172.3

Q ss_pred             cccccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCC-eeEEEEec
Q 039276           31 LFLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDD-FKALILEC  109 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-~~~lv~e~  109 (263)
                      ...|+..+.||+|+||.||+|... ++.||||+++...  ..+.+.+|+.++++++|+||+++++++.+.. ..++||||
T Consensus       192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~  268 (450)
T 1k9a_A          192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY  268 (450)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEEC
T ss_pred             hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEe
Confidence            356899999999999999999876 7899999997653  5577889999999999999999999986654 78999999


Q ss_pred             cCCCCHhhhhhhCCCc-ccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc--------------------ccc
Q 039276          110 MPHGSLGKCLSTSNYI-LDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ--------------------TLA  168 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~-~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~--------------------~~g  168 (263)
                      +++|+|.+++...+.. ++...+..++.|++.||+|||+++++||||||+||+.+..                    ..+
T Consensus       269 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~  348 (450)
T 1k9a_A          269 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL  348 (450)
T ss_dssp             CTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTCEECC------CC
T ss_pred             cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCcccccccccCCCC
Confidence            9999999999865433 6888999999999999999999999999999999995432                    245


Q ss_pred             cccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccch
Q 039276          169 TISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTK  235 (263)
Q Consensus       169 ~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (263)
                      +..|+||            |||||||++|||++ |+.||......+              ....+..      ..+.+.+
T Consensus       349 ~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~--------------~~~~i~~------~~~~~~p  408 (450)
T 1k9a_A          349 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--------------VVPRVEK------GYKMDAP  408 (450)
T ss_dssp             CTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT--------------HHHHHHT------TCCCCCC
T ss_pred             CcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--------------HHHHHHc------CCCCCCC
Confidence            6789999            99999999999998 999986432111              1111111      1122345


Q ss_pred             HHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          236 EQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       236 ~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ..+++++.+++.+||+.||++|||+.+|
T Consensus       409 ~~~~~~l~~li~~cl~~dp~~Rpt~~~l  436 (450)
T 1k9a_A          409 DGCPPAVYDVMKNCWHLDAATRPTFLQL  436 (450)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             CcCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence            5678889999999999999999999764

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=2.4e-38  Score=264.62  Aligned_cols=212  Identities=22%  Similarity=0.325  Sum_probs=171.1

Q ss_pred             ccccccceecccCceEEEEEEe------cCCceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeE
Q 039276           32 FLFSESNLISRGGFGSIYKAKI------QDGMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKA  104 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~------~~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~  104 (263)
                      .+|...+.||+|+||.||+|..      .++..||+|.+.... ....+.+.+|+++++.++||||+++++++.+.+..+
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~  102 (314)
T 2ivs_A           23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLL  102 (314)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred             hheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceE
Confidence            4599999999999999999984      235789999997653 334567889999999999999999999999999999


Q ss_pred             EEEeccCCCCHhhhhhhCCC-----------------------cccHHHHHHHHHHHHHHHHHhccCCccccccCCCccc
Q 039276          105 LILECMPHGSLGKCLSTSNY-----------------------ILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSL  161 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~~-----------------------~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil  161 (263)
                      ++|||+++++|.+++.....                       .+++..++.++.|++.||+|||+++++|+||||+||+
T Consensus       103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIl  182 (314)
T 2ivs_A          103 LIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNIL  182 (314)
T ss_dssp             EEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEE
T ss_pred             EEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchheEE
Confidence            99999999999999976432                       3788899999999999999999999999999999999


Q ss_pred             cccc-------------------------ccccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCch
Q 039276          162 TQIQ-------------------------TLATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMT  203 (263)
Q Consensus       162 ~~~~-------------------------~~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~  203 (263)
                      .+..                         ..+++.|+||            |||||||++|||++ |+.||......  .
T Consensus       183 i~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~--~  260 (314)
T 2ivs_A          183 VAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE--R  260 (314)
T ss_dssp             EETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--G
T ss_pred             EcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--H
Confidence            5432                         1346779999            99999999999999 99998643211  1


Q ss_pred             hhhHhhhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          204 LKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +...            +....      ....+..+++++.+++.+||+.||++|||+.||
T Consensus       261 ~~~~------------~~~~~------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l  302 (314)
T 2ivs_A          261 LFNL------------LKTGH------RMERPDNCSEEMYRLMLQCWKQEPDKRPVFADI  302 (314)
T ss_dssp             HHHH------------HHTTC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             HHHH------------hhcCC------cCCCCccCCHHHHHHHHHHccCChhhCcCHHHH
Confidence            1111            11100      112234567789999999999999999999764

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=1.5e-38  Score=270.01  Aligned_cols=212  Identities=21%  Similarity=0.310  Sum_probs=170.7

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCCC---chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYG---GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~---~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      ..|...+.||+|+||.||+|. ..+++.||||++.....   ...+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  133 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM  133 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence            458999999999999999999 46789999999976532   23456788999999999999999999999999999999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-------------------cccc
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-------------------QTLA  168 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-------------------~~~g  168 (263)
                      ||+. |+|.+++......+++..+..++.|++.||+|||.++++||||||+||+.+.                   ...|
T Consensus       134 e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~g  212 (348)
T 1u5q_A          134 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVG  212 (348)
T ss_dssp             ECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCS
T ss_pred             ecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCCCcccC
Confidence            9997 5888888765556899999999999999999999999999999999999543                   2357


Q ss_pred             cccccCc---------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccccc
Q 039276          169 TISYMAP---------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFM  233 (263)
Q Consensus       169 ~~~y~aP---------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (263)
                      |+.|+||               |||||||+++||++|+.||....... .+......            ..      ...
T Consensus       213 t~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~-~~~~~~~~------------~~------~~~  273 (348)
T 1u5q_A          213 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQN------------ES------PAL  273 (348)
T ss_dssp             CGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHS------------CC------CCC
T ss_pred             CcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHhc------------CC------CCC
Confidence            8899999               99999999999999999986421110 01111100            00      001


Q ss_pred             chHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          234 TKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       234 ~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ....+++.+.+++.+||+.||++|||+++|
T Consensus       274 ~~~~~~~~l~~li~~~l~~dP~~Rps~~~l  303 (348)
T 1u5q_A          274 QSGHWSEYFRNFVDSCLQKIPQDRPTSEVL  303 (348)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             CCCCCCHHHHHHHHHHcccChhhCcCHHHH
Confidence            123456679999999999999999999764

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.8e-38  Score=267.69  Aligned_cols=214  Identities=21%  Similarity=0.309  Sum_probs=169.4

Q ss_pred             cccccccceecccCceEEEEEEe------cCCceEEEEEeecC-CCchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCe
Q 039276           31 LFLFSESNLISRGGFGSIYKAKI------QDGMEVVVKGFNLQ-YGGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDF  102 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~------~~~~~v~vK~~~~~-~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~  102 (263)
                      ...|...+.||+|+||.||+|..      .++..||+|.+... .....+.+.+|+.+++.+ +||||+++++++.+.+.
T Consensus        44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~  123 (344)
T 1rjb_A           44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP  123 (344)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCc
Confidence            35699999999999999999985      23568999999755 234567788999999999 89999999999999999


Q ss_pred             eEEEEeccCCCCHhhhhhhCCC----------------------cccHHHHHHHHHHHHHHHHHhccCCccccccCCCcc
Q 039276          103 KALILECMPHGSLGKCLSTSNY----------------------ILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQS  160 (263)
Q Consensus       103 ~~lv~e~~~~~~L~~~l~~~~~----------------------~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~ni  160 (263)
                      .+++|||+++++|.+++.....                      .+++..++.++.|++.||+|||+++++|+||||+||
T Consensus       124 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NI  203 (344)
T 1rjb_A          124 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNV  203 (344)
T ss_dssp             CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGE
T ss_pred             cEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhE
Confidence            9999999999999999976532                      268889999999999999999999999999999999


Q ss_pred             ccccc-------------------------ccccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCc
Q 039276          161 LTQIQ-------------------------TLATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEM  202 (263)
Q Consensus       161 l~~~~-------------------------~~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~  202 (263)
                      +.+..                         ..||+.|+||            |||||||++|+|++ |..||....... 
T Consensus       204 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-  282 (344)
T 1rjb_A          204 LVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA-  282 (344)
T ss_dssp             EEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-
T ss_pred             EEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHH-
Confidence            95422                         2346679999            99999999999998 999986532211 


Q ss_pred             hhhhHhhhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          203 TLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .+.....            ..      .....+..+++++.+++.+||+.||.+|||+.+|
T Consensus       283 ~~~~~~~------------~~------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l  325 (344)
T 1rjb_A          283 NFYKLIQ------------NG------FKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNL  325 (344)
T ss_dssp             HHHHHHH------------TT------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             HHHHHHh------------cC------CCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHH
Confidence            1111111            10      0111234456779999999999999999999764

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=1.8e-38  Score=267.48  Aligned_cols=208  Identities=18%  Similarity=0.235  Sum_probs=164.6

Q ss_pred             ccccccceecccCceEEEEEEe----cCCceEEEEEeecCC----CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCee
Q 039276           32 FLFSESNLISRGGFGSIYKAKI----QDGMEVVVKGFNLQY----GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFK  103 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~----~~~~~v~vK~~~~~~----~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~  103 (263)
                      .+|+..+.||+|+||.||++..    .+++.||+|++....    ......+.+|+.+++.++||||+++++++.+.+..
T Consensus        17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~   96 (327)
T 3a62_A           17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKL   96 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCE
T ss_pred             HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEE
Confidence            5699999999999999999985    468999999997652    23445677899999999999999999999999999


Q ss_pred             EEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc------------------
Q 039276          104 ALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ------------------  165 (263)
Q Consensus       104 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~------------------  165 (263)
                      ++||||+++++|.+++..... +++..+..++.|++.||+|||.++++||||||+||+.+..                  
T Consensus        97 ~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~  175 (327)
T 3a62_A           97 YLILEYLSGGELFMQLEREGI-FMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG  175 (327)
T ss_dssp             EEEEECCTTEEHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC-------
T ss_pred             EEEEeCCCCCcHHHHHHhCCC-CCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCCcccccccCC
Confidence            999999999999999986544 8889999999999999999999999999999999995321                  


Q ss_pred             -----ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccc
Q 039276          166 -----TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSRE  228 (263)
Q Consensus       166 -----~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (263)
                           ..||+.|+||            |||||||++|||++|+.||...... ..+.....            ..     
T Consensus       176 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~------------~~-----  237 (327)
T 3a62_A          176 TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK-KTIDKILK------------CK-----  237 (327)
T ss_dssp             ---CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHH------------TC-----
T ss_pred             ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHh------------CC-----
Confidence                 2478999999            9999999999999999998642110 11111111            00     


Q ss_pred             cccccchHHHHHHHHHhhccccccCcCCCCCcc
Q 039276          229 DEHFMTKEQCMSFVFNLAMECTVESPNQRINAK  261 (263)
Q Consensus       229 ~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~  261 (263)
                         ...+..+++++.+++.+||+.||++||++.
T Consensus       238 ---~~~p~~~~~~~~~li~~~L~~dp~~R~~~~  267 (327)
T 3a62_A          238 ---LNLPPYLTQEARDLLKKLLKRNAASRLGAG  267 (327)
T ss_dssp             ---CCCCTTSCHHHHHHHHHHSCSCGGGSTTSS
T ss_pred             ---CCCCCCCCHHHHHHHHHHHhcCHhhccCCC
Confidence               112344567799999999999999999643

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=2.3e-38  Score=261.10  Aligned_cols=211  Identities=20%  Similarity=0.317  Sum_probs=168.4

Q ss_pred             ccccccceecccCceEEEEEEecC----CceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQD----GMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALI  106 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~----~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv  106 (263)
                      .+|+..+.||+|+||.||+|....    +..|++|.+.... ....+.+.+|+.+++.++||||+++++++. .+..+++
T Consensus        15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~lv   93 (281)
T 1mp8_A           15 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWII   93 (281)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred             HHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEEE
Confidence            469999999999999999998532    4568999987643 234567889999999999999999999985 4568999


Q ss_pred             EeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc---------------------
Q 039276          107 LECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ---------------------  165 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~---------------------  165 (263)
                      |||+++++|.+++......+++..++.++.|++.||+|||+++++|+||||+||+.+..                     
T Consensus        94 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  173 (281)
T 1mp8_A           94 MELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYK  173 (281)
T ss_dssp             EECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC--------------
T ss_pred             EecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECccccccccCcccccc
Confidence            99999999999998766568999999999999999999999999999999999995432                     


Q ss_pred             ---ccccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccc
Q 039276          166 ---TLATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSRED  229 (263)
Q Consensus       166 ---~~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (263)
                         ..+++.|+||            |||||||++|||++ |..||......+ .......                   .
T Consensus       174 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~-~~~~i~~-------------------~  233 (281)
T 1mp8_A          174 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND-VIGRIEN-------------------G  233 (281)
T ss_dssp             -----CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG-HHHHHHT-------------------T
T ss_pred             cccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH-HHHHHHc-------------------C
Confidence               2345679999            99999999999997 999986432111 1111100                   0


Q ss_pred             ccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          230 EHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       230 ~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .+.+.+..+++++.+++.+||+.||++|||+.||
T Consensus       234 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l  267 (281)
T 1mp8_A          234 ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL  267 (281)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHH
Confidence            1112344667789999999999999999999764

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=2e-38  Score=262.09  Aligned_cols=211  Identities=22%  Similarity=0.338  Sum_probs=172.0

Q ss_pred             ccccccceecccCceEEEEEEec-CCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ-DGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~-~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      .+|+..+.||+|+||.||+|... ++..||+|.+... ....+.+.+|+++++.++|+||+++++++.+.+..++|||++
T Consensus        13 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   91 (288)
T 3kfa_A           13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM   91 (288)
T ss_dssp             GGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred             cceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcC
Confidence            45999999999999999999954 5889999999765 345677889999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc-----------------------
Q 039276          111 PHGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT-----------------------  166 (263)
Q Consensus       111 ~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~-----------------------  166 (263)
                      ++++|.+++.... ..+++..++.++.|++.||+|||+++++|+||||+||+.+...                       
T Consensus        92 ~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~  171 (288)
T 3kfa_A           92 TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG  171 (288)
T ss_dssp             TTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEETT
T ss_pred             CCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCccceeccCCccccccC
Confidence            9999999998643 3388999999999999999999999999999999999954321                       


Q ss_pred             -cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccc
Q 039276          167 -LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHF  232 (263)
Q Consensus       167 -~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (263)
                       .+++.|+||            ||||||+++|+|++ |..||......  ..            ...+...      .+.
T Consensus       172 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~--~~------------~~~~~~~------~~~  231 (288)
T 3kfa_A          172 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QV------------YELLEKD------YRM  231 (288)
T ss_dssp             EEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GH------------HHHHHTT------CCC
T ss_pred             CccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HH------------HHHHhcc------CCC
Confidence             235679999            99999999999999 99998643111  11            1111111      111


Q ss_pred             cchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          233 MTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       233 ~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ..+..+++++.+++.+||+.||++|||+++|
T Consensus       232 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~  262 (288)
T 3kfa_A          232 ERPEGCPEKVYELMRACWQWNPSDRPSFAEI  262 (288)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             CCCCCCCHHHHHHHHHHhCCChhhCcCHHHH
Confidence            2234566789999999999999999999764

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=2.4e-38  Score=280.59  Aligned_cols=212  Identities=23%  Similarity=0.339  Sum_probs=173.9

Q ss_pred             cccccccceecccCceEEEEEEec-CCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           31 LFLFSESNLISRGGFGSIYKAKIQ-DGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~~-~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      ..+|...+.||+|+||.||+|.+. ++..||||.+.... ...+.+.+|+.+++.++||||+++++++.+....++||||
T Consensus       219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~  297 (495)
T 1opk_A          219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF  297 (495)
T ss_dssp             GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEc
Confidence            356899999999999999999955 48899999997653 3467889999999999999999999999998899999999


Q ss_pred             cCCCCHhhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc----------------------
Q 039276          110 MPHGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT----------------------  166 (263)
Q Consensus       110 ~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~----------------------  166 (263)
                      +++|+|.+++.... ..+++..++.++.|++.||+|||+++++||||||+||+++...                      
T Consensus       298 ~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~  377 (495)
T 1opk_A          298 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA  377 (495)
T ss_dssp             CTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCT
T ss_pred             cCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecccceeccCCceeecC
Confidence            99999999998643 3488999999999999999999999999999999999954321                      


Q ss_pred             --cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccc
Q 039276          167 --LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEH  231 (263)
Q Consensus       167 --~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (263)
                        .++..|+||            |||||||++|||++ |+.||......  .            +...+..      ..+
T Consensus       378 ~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~--~------------~~~~~~~------~~~  437 (495)
T 1opk_A          378 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--Q------------VYELLEK------DYR  437 (495)
T ss_dssp             TCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--G------------HHHHHHT------TCC
T ss_pred             CCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH--H------------HHHHHHc------CCC
Confidence              235679999            99999999999999 99998643211  1            1111111      112


Q ss_pred             ccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          232 FMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       232 ~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .+.+..+++++.+++.+||+.||++|||+.+|
T Consensus       438 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el  469 (495)
T 1opk_A          438 MERPEGCPEKVYELMRACWQWNPSDRPSFAEI  469 (495)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHcCcChhHCcCHHHH
Confidence            23355677889999999999999999999764

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=2.1e-38  Score=266.92  Aligned_cols=211  Identities=20%  Similarity=0.337  Sum_probs=165.2

Q ss_pred             ccccccceecccCceEEEEEEe-cCCc----eEEEEEeecC-CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGM----EVVVKGFNLQ-YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKAL  105 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~----~v~vK~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l  105 (263)
                      .+|+..+.||+|+||.||+|.+ .+++    +|++|.+... .....+.+.+|+.+++.++||||+++++++.++. .++
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~   93 (327)
T 3poz_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL   93 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred             HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence            4699999999999999999984 3344    4688887544 2345677889999999999999999999998765 789


Q ss_pred             EEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc--------------------
Q 039276          106 ILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ--------------------  165 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~--------------------  165 (263)
                      ++|++++|+|.+++......+++..++.++.|++.||+|||+++++||||||+||+.+..                    
T Consensus        94 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~  173 (327)
T 3poz_A           94 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE  173 (327)
T ss_dssp             EEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC-
T ss_pred             EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcceeEccCCccc
Confidence            999999999999998866668999999999999999999999999999999999995432                    


Q ss_pred             -----ccccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccc
Q 039276          166 -----TLATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSR  227 (263)
Q Consensus       166 -----~~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (263)
                           ..+|..|+||            |||||||++|||++ |+.||......  .+.            ..+...    
T Consensus       174 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~------------~~~~~~----  235 (327)
T 3poz_A          174 YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EIS------------SILEKG----  235 (327)
T ss_dssp             ------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHH------------HHHHTT----
T ss_pred             ccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH--HHH------------HHHHcC----
Confidence                 2347789999            99999999999999 99998643211  111            111111    


Q ss_pred             ccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          228 EDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       228 ~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                        .+.+.+..++.++.+++.+||+.||++|||+.||
T Consensus       236 --~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~el  269 (327)
T 3poz_A          236 --ERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL  269 (327)
T ss_dssp             --CCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHH
T ss_pred             --CCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHH
Confidence              1112244566779999999999999999999764

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=5.2e-38  Score=270.66  Aligned_cols=212  Identities=18%  Similarity=0.264  Sum_probs=170.0

Q ss_pred             ccccccceecccCceEEEEEEecCCceEEEEEeecCC--CchHHHHHHHHHHHhhcC--CCcceeEeeEeecCCeeEEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIR--HQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~--h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      ..|...+.||+|+||.||++...+++.||||++....  ......+.+|+++++.++  |+||+++++++...+..++||
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~  135 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM  135 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence            3599999999999999999997779999999997653  234567889999999996  599999999999999999999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-----------------------
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-----------------------  164 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-----------------------  164 (263)
                      | +.+++|.+++.... .+++..+..++.|++.||+|||+++|+||||||+||+...                       
T Consensus       136 E-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~kl~DFG~a~~~~~~~~~~~~  213 (390)
T 2zmd_A          136 E-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVK  213 (390)
T ss_dssp             E-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEESSSCEEECCCSSSCCC---------
T ss_pred             e-cCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEECCeEEEEecCccccccCCCccccC
Confidence            9 56789999998765 4888899999999999999999999999999999999421                       


Q ss_pred             -cccccccccCc-----------------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhh
Q 039276          165 -QTLATISYMAP-----------------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVV  220 (263)
Q Consensus       165 -~~~g~~~y~aP-----------------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (263)
                       ...||+.|+||                       |||||||++|||++|+.||.........+.....           
T Consensus       214 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~-----------  282 (390)
T 2zmd_A          214 DSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID-----------  282 (390)
T ss_dssp             CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHC-----------
T ss_pred             CCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhC-----------
Confidence             23588999997                       9999999999999999998643211111111111           


Q ss_pred             hhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          221 SANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                       ...      ....+...++++.+++.+||+.||++|||+.||
T Consensus       283 -~~~------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~el  318 (390)
T 2zmd_A          283 -PNH------EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPEL  318 (390)
T ss_dssp             -TTS------CCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred             -ccc------cCCCCccchHHHHHHHHHHcccChhhCCCHHHH
Confidence             100      011122335568999999999999999999764

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=2.6e-38  Score=271.91  Aligned_cols=212  Identities=24%  Similarity=0.367  Sum_probs=170.7

Q ss_pred             ccccccceecccCceEEEEEEec--------CCceEEEEEeecCC-CchHHHHHHHHHHHhhc-CCCcceeEeeEeecCC
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ--------DGMEVVVKGFNLQY-GGAFKNLDVECNMMKII-RHQNLIKIISSCSKDD  101 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~--------~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~  101 (263)
                      .+|...+.||+|+||.||+|...        .+..||+|++.... ......+.+|+++++.+ +|+||+++++++.+.+
T Consensus        69 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~  148 (382)
T 3tt0_A           69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG  148 (382)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             hheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCC
Confidence            56999999999999999999842        23579999997653 33456788999999999 9999999999999999


Q ss_pred             eeEEEEeccCCCCHhhhhhhCC---------------CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-
Q 039276          102 FKALILECMPHGSLGKCLSTSN---------------YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-  165 (263)
Q Consensus       102 ~~~lv~e~~~~~~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-  165 (263)
                      ..++||||+++++|.+++....               ..+++..++.++.|++.||+|||+++++||||||+||+++.. 
T Consensus       149 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~  228 (382)
T 3tt0_A          149 PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN  228 (382)
T ss_dssp             SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC
T ss_pred             ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEcCCC
Confidence            9999999999999999998643               238899999999999999999999999999999999995421 


Q ss_pred             ------------------------ccccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHh
Q 039276          166 ------------------------TLATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWV  208 (263)
Q Consensus       166 ------------------------~~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~  208 (263)
                                              ..+++.|+||            |||||||+++||++ |..||.....  ..+.   
T Consensus       229 ~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~--~~~~---  303 (382)
T 3tt0_A          229 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV--EELF---  303 (382)
T ss_dssp             CEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HHHH---
T ss_pred             cEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH--HHHH---
Confidence                                    2356779999            99999999999999 9999864211  1111   


Q ss_pred             hhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          209 NDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                               ..+...      .+...+..+++++.+++.+||+.||++|||++||
T Consensus       304 ---------~~~~~~------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~el  343 (382)
T 3tt0_A          304 ---------KLLKEG------HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQL  343 (382)
T ss_dssp             ---------HHHHTT------CCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             ---------HHHHcC------CCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence                     111110      0111234566779999999999999999999864

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=100.00  E-value=5.3e-38  Score=258.91  Aligned_cols=214  Identities=20%  Similarity=0.245  Sum_probs=171.8

Q ss_pred             ccccccceecccCceEEEEEEec-CCceEEEEEeecCCC------chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ-DGMEVVVKGFNLQYG------GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKA  104 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~-~~~~v~vK~~~~~~~------~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~  104 (263)
                      .+|+..+.||+|+||.||++... +++.||+|.+.....      ...+.+.+|+.+++.++||||+++++++.+....+
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV   84 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence            35899999999999999999954 689999999976522      23677889999999999999999999999999999


Q ss_pred             EEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-------------------
Q 039276          105 LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-------------------  165 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-------------------  165 (263)
                      ++||++++++|.+++..... +++..+..++.|++.||+|||+++++|+||+|+||+....                   
T Consensus        85 lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~  163 (283)
T 3bhy_A           85 LILELVSGGELFDFLAEKES-LTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE  163 (283)
T ss_dssp             EEEECCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC
T ss_pred             EEEeecCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccceecc
Confidence            99999999999999976543 8999999999999999999999999999999999986322                   


Q ss_pred             -------ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccc
Q 039276          166 -------TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLS  226 (263)
Q Consensus       166 -------~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (263)
                             ..|++.|+||            ||||||+++++|++|+.||...... ..+........              
T Consensus       164 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~--------------  228 (283)
T 3bhy_A          164 AGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ-ETLTNISAVNY--------------  228 (283)
T ss_dssp             --------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHTTCC--------------
T ss_pred             CCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH-HHHHHhHhccc--------------
Confidence                   1367889999            9999999999999999998642110 11111110000              


Q ss_pred             cccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          227 REDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       227 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                        .........+++.+.+++.+||+.||++|||+.|+
T Consensus       229 --~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~  263 (283)
T 3bhy_A          229 --DFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQS  263 (283)
T ss_dssp             --CCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred             --CCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHH
Confidence              00001123456679999999999999999998764

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=1.3e-38  Score=268.55  Aligned_cols=215  Identities=18%  Similarity=0.139  Sum_probs=168.8

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCCCchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCeeEEEEec
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      .+|+..+.||+|+||.||+|. ..+++.||+|++.....  .+.+..|+++++.+ +|+||+++++++.+.+..++||||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~   86 (330)
T 2izr_A            9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLEL   86 (330)
T ss_dssp             TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEEC
T ss_pred             CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEe
Confidence            459999999999999999999 46789999999876532  34577899999999 999999999999999999999999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-------------------------
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-------------------------  164 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-------------------------  164 (263)
                      + +++|.+++......+++..+..++.|++.||+|||+++++||||||+||+.+.                         
T Consensus        87 ~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~  165 (330)
T 2izr_A           87 L-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPET  165 (330)
T ss_dssp             C-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTT
T ss_pred             C-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCC
Confidence            9 88999999875556999999999999999999999999999999999999532                         


Q ss_pred             ----------cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhh
Q 039276          165 ----------QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSA  222 (263)
Q Consensus       165 ----------~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (263)
                                ...||+.|+||            |||||||++|||++|+.||......+  ......        .+...
T Consensus       166 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~--~~~~~~--------~i~~~  235 (330)
T 2izr_A          166 KKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADT--LKERYQ--------KIGDT  235 (330)
T ss_dssp             CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSS--HHHHHH--------HHHHH
T ss_pred             CccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccccccc--HHHHHH--------HHHhh
Confidence                      22468899999            99999999999999999997542111  110000        00000


Q ss_pred             cccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          223 NLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ......   ......++ ++.+++..||+.||.+||++++|
T Consensus       236 ~~~~~~---~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l  272 (330)
T 2izr_A          236 KRATPI---EVLCENFP-EMATYLRYVRRLDFFEKPDYDYL  272 (330)
T ss_dssp             HHHSCH---HHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHH
T ss_pred             hccCCH---HHHhccCh-HHHHHHHHHHhCCCCCCCCHHHH
Confidence            000000   00011234 79999999999999999998764

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=9.3e-39  Score=267.26  Aligned_cols=213  Identities=14%  Similarity=0.266  Sum_probs=167.1

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCCC---chHHHHHHHHHHHhhcCCCcceeEeeEeecCC----ee
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYG---GAFKNLDVECNMMKIIRHQNLIKIISSCSKDD----FK  103 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~---~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~----~~  103 (263)
                      ++|+..+.||+|+||.||++. ..+++.||+|++.....   .....+.+|+.+++.++||||+++++++....    ..
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~   91 (311)
T 3ork_A           12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP   91 (311)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred             CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence            469999999999999999999 46789999999976532   23456788999999999999999999986543    34


Q ss_pred             EEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc------------------
Q 039276          104 ALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ------------------  165 (263)
Q Consensus       104 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~------------------  165 (263)
                      ++||||+++++|.+++..... +++..++.++.|++.||+|||+++++|+||||+||+.+..                  
T Consensus        92 ~lv~e~~~g~~L~~~l~~~~~-~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~  170 (311)
T 3ork_A           92 YIVMEYVDGVTLRDIVHTEGP-MTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSG  170 (311)
T ss_dssp             EEEEECCCEEEHHHHHHHHCS-CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC-------
T ss_pred             EEEEecCCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCcccccccc
Confidence            999999999999999986554 8999999999999999999999999999999999995321                  


Q ss_pred             --------ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccc
Q 039276          166 --------TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLL  225 (263)
Q Consensus       166 --------~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (263)
                              ..||+.|+||            |||||||++|||++|+.||........... ...            ....
T Consensus       171 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~-~~~------------~~~~  237 (311)
T 3ork_A          171 NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ-HVR------------EDPI  237 (311)
T ss_dssp             -----------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH-HHH------------CCCC
T ss_pred             cccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHH-Hhc------------CCCC
Confidence                    2378899999            999999999999999999864211111000 000            0000


Q ss_pred             ccccccccchHHHHHHHHHhhccccccCcCCCCCccC
Q 039276          226 SREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKE  262 (263)
Q Consensus       226 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~e  262 (263)
                          ........+++++.+++.+||+.||++||++.+
T Consensus       238 ----~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~  270 (311)
T 3ork_A          238 ----PPSARHEGLSADLDAVVLKALAKNPENRYQTAA  270 (311)
T ss_dssp             ----CHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHH
T ss_pred             ----CcccccCCCCHHHHHHHHHHHhcCHhhChhhHH
Confidence                000012346677999999999999999998754

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=100.00  E-value=5.4e-38  Score=264.83  Aligned_cols=233  Identities=21%  Similarity=0.282  Sum_probs=174.5

Q ss_pred             cccccccccceecccCceEEEEEEe-cCCceEEEEEeecCCCc--hHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEE
Q 039276           29 SGLFLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGG--AFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKAL  105 (263)
Q Consensus        29 ~~~~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~--~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l  105 (263)
                      ...++|+..+.||+|+||.||+|.. .+++.||+|++......  ..+.+.+|+.+++.++|+||+++++++.+.+..++
T Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  101 (331)
T 4aaa_A           22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYL  101 (331)
T ss_dssp             BCGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             hhhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEE
Confidence            3456799999999999999999995 45899999999765332  34557789999999999999999999999999999


Q ss_pred             EEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc--------------------
Q 039276          106 ILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ--------------------  165 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~--------------------  165 (263)
                      ||||+++++|..+...... +++..+..++.|++.||+|||+++++|+||||+||+.+..                    
T Consensus       102 v~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  180 (331)
T 4aaa_A          102 VFEFVDHTILDDLELFPNG-LDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEV  180 (331)
T ss_dssp             EEECCSEEHHHHHHHSTTC-CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC---------
T ss_pred             EEecCCcchHHHHHhhccC-CCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCccc
Confidence            9999999888887665443 8999999999999999999999999999999999995322                    


Q ss_pred             ---ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCC--Cchhhhhhhc----
Q 039276          166 ---TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLP--NSVMKVVSAN----  223 (263)
Q Consensus       166 ---~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~----  223 (263)
                         ..|+..|+||             |||||||++|+|++|+.||......+ .+.........  ..........    
T Consensus       181 ~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (331)
T 4aaa_A          181 YDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDID-QLYHIMMCLGNLIPRHQELFNKNPVFA  259 (331)
T ss_dssp             ---CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCSCCHHHHHHHHHCGGGT
T ss_pred             cCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCCCChhhhhHhhhccccc
Confidence               2468889999             99999999999999999986432111 11111110000  0000000000    


Q ss_pred             --cccc---ccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          224 --LLSR---EDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       224 --~~~~---~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                        ..+.   ..........+++++.+++.+||+.||++|||++|+
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~el  304 (331)
T 4aaa_A          260 GVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAEL  304 (331)
T ss_dssp             TCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGG
T ss_pred             cccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHH
Confidence              0000   000001123567789999999999999999999875

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=2.9e-38  Score=266.33  Aligned_cols=230  Identities=17%  Similarity=0.169  Sum_probs=168.8

Q ss_pred             cccccccceecccCceEEEEEE-ecCCceEEEEEeecCCC--chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           31 LFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYG--GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~--~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      .++|+..+.||+|+||.||+|. ..+++.||+|++.....  .....+.+|+.+++.++|+||+++++++.+....++||
T Consensus        33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  112 (329)
T 3gbz_A           33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIF  112 (329)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEE
Confidence            3579999999999999999998 45689999999975532  23456678999999999999999999999999999999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-----------------------
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-----------------------  164 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-----------------------  164 (263)
                      ||+++ +|.+++..... +++..++.++.|++.||+|||+++++||||||+||+...                       
T Consensus       113 e~~~~-~L~~~~~~~~~-~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~  190 (329)
T 3gbz_A          113 EYAEN-DLKKYMDKNPD-VSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIP  190 (329)
T ss_dssp             ECCSE-EHHHHHHHCTT-CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC--
T ss_pred             ecCCC-CHHHHHhhcCC-CCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCc
Confidence            99975 99999987654 899999999999999999999999999999999999731                       


Q ss_pred             -----cccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccc
Q 039276          165 -----QTLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLS  226 (263)
Q Consensus       165 -----~~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (263)
                           ...||+.|+||             |||||||++|||++|+.||...... ..+......................
T Consensus       191 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  269 (329)
T 3gbz_A          191 IRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEI-DQLFKIFEVLGLPDDTTWPGVTALP  269 (329)
T ss_dssp             ---------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCTTTSTTGGGST
T ss_pred             ccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHH-HHHHHHHHHhCCCchhhhhhhhhhh
Confidence                 11358889999             9999999999999999998643211 1111111111000000000000000


Q ss_pred             ----------cccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          227 ----------REDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       227 ----------~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                                ...........+++++.+++.+||+.||++|||++|+
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~  316 (329)
T 3gbz_A          270 DWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNA  316 (329)
T ss_dssp             TCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             hhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHH
Confidence                      0000001122356789999999999999999999864

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=3.6e-38  Score=269.86  Aligned_cols=210  Identities=20%  Similarity=0.188  Sum_probs=162.9

Q ss_pred             ccccccccceecccCceEEEEEEe-cCCceEEEEEeecCCC---chHHHHHHHHHH-HhhcCCCcceeEeeEeecCCeeE
Q 039276           30 GLFLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYG---GAFKNLDVECNM-MKIIRHQNLIKIISSCSKDDFKA  104 (263)
Q Consensus        30 ~~~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~---~~~~~~~~e~~~-l~~~~h~~i~~~~~~~~~~~~~~  104 (263)
                      ...+|+..+.||+|+||.||+++. .+++.||+|++.....   .....+..|..+ ++.++||||+++++++.+.+..|
T Consensus        36 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~  115 (373)
T 2r5t_A           36 KPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLY  115 (373)
T ss_dssp             CGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEE
T ss_pred             ChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEE
Confidence            346799999999999999999994 4588999999976532   233445566665 56789999999999999999999


Q ss_pred             EEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc--------------------
Q 039276          105 LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI--------------------  164 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~--------------------  164 (263)
                      +||||+++|+|.+++..... +++..++.++.|++.||+|||+++++||||||+||+++.                    
T Consensus       116 lv~E~~~gg~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~~  194 (373)
T 2r5t_A          116 FVLDYINGGELFYHLQRERC-FLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNS  194 (373)
T ss_dssp             EEEECCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCCC
T ss_pred             EEEeCCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCccccccccCCC
Confidence            99999999999999986544 888999999999999999999999999999999999532                    


Q ss_pred             ---cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccc
Q 039276          165 ---QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSRED  229 (263)
Q Consensus       165 ---~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (263)
                         ...||+.|+||            |||||||++|||++|+.||..... ...+....            ...      
T Consensus       195 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~-~~~~~~i~------------~~~------  255 (373)
T 2r5t_A          195 TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT-AEMYDNIL------------NKP------  255 (373)
T ss_dssp             CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH-HHHHHHHH------------HSC------
T ss_pred             ccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH-HHHHHHHH------------hcc------
Confidence               23579999999            999999999999999999864211 11111111            110      


Q ss_pred             ccccchHHHHHHHHHhhccccccCcCCCCCcc
Q 039276          230 EHFMTKEQCMSFVFNLAMECTVESPNQRINAK  261 (263)
Q Consensus       230 ~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~  261 (263)
                        ...+..+++++.+++.+||+.||.+||++.
T Consensus       256 --~~~~~~~~~~~~~li~~lL~~dp~~R~~~~  285 (373)
T 2r5t_A          256 --LQLKPNITNSARHLLEGLLQKDRTKRLGAK  285 (373)
T ss_dssp             --CCCCSSSCHHHHHHHHHHTCSSGGGSTTTT
T ss_pred             --cCCCCCCCHHHHHHHHHHcccCHHhCCCCC
Confidence              012334567799999999999999999985

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=100.00  E-value=5.8e-38  Score=270.93  Aligned_cols=232  Identities=16%  Similarity=0.194  Sum_probs=176.4

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecCC--eeEEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDD--FKALIL  107 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--~~~lv~  107 (263)
                      .+|...+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|+++++.++|+||+++++++.+..  ..++||
T Consensus         9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~   88 (396)
T 4eut_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM   88 (396)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence            4599999999999999999995 458999999997653 234567788999999999999999999987654  789999


Q ss_pred             eccCCCCHhhhhhhCCC--cccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccc----cc-----------------
Q 039276          108 ECMPHGSLGKCLSTSNY--ILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLT----QI-----------------  164 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~----~~-----------------  164 (263)
                      ||+++++|.+++.....  .+++..++.++.|++.||+|||+++++||||||+||+.    +.                 
T Consensus        89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~  168 (396)
T 4eut_A           89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED  168 (396)
T ss_dssp             CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCC
T ss_pred             ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccC
Confidence            99999999999976432  28999999999999999999999999999999999985    21                 


Q ss_pred             -----cccccccccCc--------------------chhhHHHHHHHHHhCCCCCccccCCCch---hhhHhhhcCCCch
Q 039276          165 -----QTLATISYMAP--------------------DTYNFGIMIMETFSGKKPTIKFFHGEMT---LKHWVNDLLPNSV  216 (263)
Q Consensus       165 -----~~~g~~~y~aP--------------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~---~~~~~~~~~~~~~  216 (263)
                           ...||+.|+||                    |||||||++|||++|+.||.........   +........+...
T Consensus       169 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~  248 (396)
T 4eut_A          169 DEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAI  248 (396)
T ss_dssp             GGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCC
T ss_pred             CCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccc
Confidence                 12478889998                    9999999999999999999754332221   2222222111111


Q ss_pred             hhhhh---hc--ccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          217 MKVVS---AN--LLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       217 ~~~~~---~~--~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .....   ..  .....+........+++.+.+++.+||+.||++|||++|+
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~  300 (396)
T 4eut_A          249 SGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQF  300 (396)
T ss_dssp             EEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHH
T ss_pred             hhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHH
Confidence            10000   00  0001111112346788889999999999999999998763

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=3.6e-38  Score=275.07  Aligned_cols=167  Identities=22%  Similarity=0.237  Sum_probs=143.1

Q ss_pred             cccccccccccceecccCceEEEEEE-ecCCceEEEEEeecC--CCchHHHHHHHHHHHhhcCCCcceeEeeEeecC---
Q 039276           27 NFSGLFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQ--YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKD---  100 (263)
Q Consensus        27 ~~~~~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~---  100 (263)
                      ++....+|...+.||+|+||.||+|. ..+++.||||++...  .....+++.+|+.+++.++|+||+++++++...   
T Consensus        21 ~~~i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~  100 (432)
T 3n9x_A           21 NVHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLL  100 (432)
T ss_dssp             GCCCCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTT
T ss_pred             cceecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCC
Confidence            44455779999999999999999999 456889999999754  233567788999999999999999999999765   


Q ss_pred             --CeeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc--------------
Q 039276          101 --DFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI--------------  164 (263)
Q Consensus       101 --~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~--------------  164 (263)
                        ...|+|||++. ++|.+++..... +++..+..++.|++.||+|||+++++||||||+||+++.              
T Consensus       101 ~~~~~~lv~e~~~-~~L~~~~~~~~~-l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~  178 (432)
T 3n9x_A          101 KFDELYIVLEIAD-SDLKKLFKTPIF-LTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLART  178 (432)
T ss_dssp             TCCCEEEEEECCS-EEHHHHHHSSCC-CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             cCCeEEEEEecCC-cCHHHHHhccCC-CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCccc
Confidence              56899999986 499999976543 899999999999999999999999999999999999432              


Q ss_pred             -------------------------------cccccccccCc-------------chhhHHHHHHHHHhCCCCCc
Q 039276          165 -------------------------------QTLATISYMAP-------------DTYNFGIMIMETFSGKKPTI  195 (263)
Q Consensus       165 -------------------------------~~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~  195 (263)
                                                     ...||+.|+||             |||||||++|||++|..||.
T Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~  253 (432)
T 3n9x_A          179 INSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI  253 (432)
T ss_dssp             C-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred             ccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence                                           23568889999             99999999999999766654

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=100.00  E-value=2.8e-38  Score=264.78  Aligned_cols=214  Identities=19%  Similarity=0.247  Sum_probs=170.9

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEee----cCCeeEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCS----KDDFKALI  106 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~----~~~~~~lv  106 (263)
                      .+|+..+.||+|+||.||++.. .+++.||+|++........+.+.+|+++++.++||||+++++++.    .....+++
T Consensus        29 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv  108 (317)
T 2buj_A           29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLL  108 (317)
T ss_dssp             EEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEE
T ss_pred             eEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEE
Confidence            4699999999999999999994 679999999997766666778889999999999999999999986    33478999


Q ss_pred             EeccCCCCHhhhhhh---CCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc------------------
Q 039276          107 LECMPHGSLGKCLST---SNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ------------------  165 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~------------------  165 (263)
                      +||+++++|.+++..   ....+++..++.++.|++.||+|||.++++|+||||+||+.+..                  
T Consensus       109 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~  188 (317)
T 2buj_A          109 LPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHV  188 (317)
T ss_dssp             EECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCSSCEESCEEE
T ss_pred             EEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCcchhccccc
Confidence            999999999999875   23448999999999999999999999999999999999996432                  


Q ss_pred             --------------ccccccccCc---------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCch
Q 039276          166 --------------TLATISYMAP---------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSV  216 (263)
Q Consensus       166 --------------~~g~~~y~aP---------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~  216 (263)
                                    ..|++.|+||               |||||||++|+|++|+.||...............       
T Consensus       189 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~-------  261 (317)
T 2buj_A          189 EGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQ-------  261 (317)
T ss_dssp             ESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHH-------
T ss_pred             ccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhh-------
Confidence                          1247889999               9999999999999999998643222111111111       


Q ss_pred             hhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          217 MKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                           .      ....+....+++++.+++.+||+.||.+|||+++|
T Consensus       262 -----~------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l  297 (317)
T 2buj_A          262 -----N------QLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLL  297 (317)
T ss_dssp             -----C------C--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             -----c------cCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHH
Confidence                 0      00111234556779999999999999999999764

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=2.1e-38  Score=263.10  Aligned_cols=214  Identities=13%  Similarity=0.070  Sum_probs=171.2

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCCCchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCeeEEEEec
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      .+|+..+.||+|+||.||+|. ..+++.||+|++....  ..+.+.+|+..++.+ +|++++++++++.+....+++||+
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~   87 (298)
T 1csn_A           10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL   87 (298)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred             cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEe
Confidence            459999999999999999999 4669999999987553  334577899999999 799999999999999999999999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc------------------------
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ------------------------  165 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~------------------------  165 (263)
                      + +++|.+++...+..+++..+..++.|++.||+|||+++++||||||+||+.+..                        
T Consensus        88 ~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~  166 (298)
T 1csn_A           88 L-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVT  166 (298)
T ss_dssp             C-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTT
T ss_pred             c-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccc
Confidence            9 889999998766568999999999999999999999999999999999996321                        


Q ss_pred             -----------ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCc--hhhhHhhhcCCCchhhhh
Q 039276          166 -----------TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEM--TLKHWVNDLLPNSVMKVV  220 (263)
Q Consensus       166 -----------~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~--~~~~~~~~~~~~~~~~~~  220 (263)
                                 ..||+.|+||            |||||||++|||++|+.||........  .+.....           
T Consensus       167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~-----------  235 (298)
T 1csn_A          167 KQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGE-----------  235 (298)
T ss_dssp             CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHH-----------
T ss_pred             cccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHh-----------
Confidence                       1367889999            999999999999999999975422211  1111100           


Q ss_pred             hhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          221 SANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                       ......   .......+++++.+++.+||+.||++|||+++|
T Consensus       236 -~~~~~~---~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l  274 (298)
T 1csn_A          236 -KKQSTP---LRELCAGFPEEFYKYMHYARNLAFDATPDYDYL  274 (298)
T ss_dssp             -HHHHSC---HHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHH
T ss_pred             -hccCcc---HHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHH
Confidence             000000   000123456789999999999999999999764

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=100.00  E-value=9.7e-38  Score=258.39  Aligned_cols=213  Identities=19%  Similarity=0.288  Sum_probs=169.9

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeec----CCeeE
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSK----DDFKA  104 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~----~~~~~  104 (263)
                      ..|...+.||+|+||.||+|.. .++..|++|.+....  ....+.+.+|+.+++.++||||+++++++..    ....+
T Consensus        26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~  105 (290)
T 1t4h_A           26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV  105 (290)
T ss_dssp             CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred             eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence            3488889999999999999984 568889999997653  3456678899999999999999999998864    35689


Q ss_pred             EEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCC--ccccccCCCccccc-c-----------------
Q 039276          105 LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGH--STHLLLKEDQSLTQ-I-----------------  164 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--i~h~dlk~~nil~~-~-----------------  164 (263)
                      +||||+++++|.+++..... +++..++.++.|++.||+|||+++  ++|+||||+||+.. .                 
T Consensus       106 lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~  184 (290)
T 1t4h_A          106 LVTELMTSGTLKTYLKRFKV-MKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA  184 (290)
T ss_dssp             EEEECCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred             EEEEecCCCCHHHHHHHccC-CCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccccc
Confidence            99999999999999987544 889999999999999999999999  99999999999964 1                 


Q ss_pred             ----cccccccccCc-----------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccc
Q 039276          165 ----QTLATISYMAP-----------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSRED  229 (263)
Q Consensus       165 ----~~~g~~~y~aP-----------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (263)
                          ...|++.|+||           |||||||++++|++|+.||..................+                
T Consensus       185 ~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~----------------  248 (290)
T 1t4h_A          185 SFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP----------------  248 (290)
T ss_dssp             TSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCC----------------
T ss_pred             cccccccCCcCcCCHHHHhccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCc----------------
Confidence                12478899999           99999999999999999986432221111111111000                


Q ss_pred             ccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          230 EHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       230 ~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                        ...+...++++.+++.+||+.||++|||++||
T Consensus       249 --~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el  280 (290)
T 1t4h_A          249 --ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDL  280 (290)
T ss_dssp             --GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             --cccCCCCCHHHHHHHHHHccCChhhCCCHHHH
Confidence              01123344569999999999999999999764

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=7.3e-38  Score=263.63  Aligned_cols=226  Identities=17%  Similarity=0.208  Sum_probs=172.4

Q ss_pred             cccccccceecccCceEEEEEE-ecCCceEEEEEeecCCCchHHHHHHHHHHHhhcC-CCcceeEeeEeec--CCeeEEE
Q 039276           31 LFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIR-HQNLIKIISSCSK--DDFKALI  106 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~--~~~~~lv  106 (263)
                      ..+|+..+.||+|+||.||+|. ..+++.||+|++...   ..+.+.+|+++++.++ |+||+++++++.+  ....+++
T Consensus        35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv  111 (330)
T 3nsz_A           35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV  111 (330)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred             CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence            4679999999999999999998 466899999998744   3567889999999996 9999999999987  5678999


Q ss_pred             EeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc---------------------
Q 039276          107 LECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ---------------------  165 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~---------------------  165 (263)
                      |||+++++|.+++..    +++..+..++.|++.||+|||+++++||||||+||+.+..                     
T Consensus       112 ~e~~~~~~l~~~~~~----~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~  187 (330)
T 3nsz_A          112 FEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY  187 (330)
T ss_dssp             EECCCCCCHHHHGGG----CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCCC
T ss_pred             EeccCchhHHHHHHh----CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCcc
Confidence            999999999998854    7888999999999999999999999999999999996422                     


Q ss_pred             --ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhc-------
Q 039276          166 --TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSAN-------  223 (263)
Q Consensus       166 --~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  223 (263)
                        ..|+..|+||             |||||||++++|++|+.||.........+...................       
T Consensus       188 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (330)
T 3nsz_A          188 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR  267 (330)
T ss_dssp             CSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTH
T ss_pred             ccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccc
Confidence              2467779998             999999999999999999954322222222221111111111111100       


Q ss_pred             --------cccc--ccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          224 --------LLSR--EDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       224 --------~~~~--~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                              ....  ..........+++++.+++.+||+.||++|||++|+
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~  317 (330)
T 3nsz_A          268 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA  317 (330)
T ss_dssp             HHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred             hhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHH
Confidence                    0000  000111234467889999999999999999999864

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=3e-38  Score=267.54  Aligned_cols=215  Identities=19%  Similarity=0.222  Sum_probs=169.7

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecC-----CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQ-----YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKAL  105 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~-----~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l  105 (263)
                      .+|+..+.||+|+||.||+|.. .++..||+|++...     .....+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus        26 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  105 (345)
T 3hko_A           26 KKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICL  105 (345)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             hheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEE
Confidence            5699999999999999999994 56889999999654     23556788899999999999999999999999999999


Q ss_pred             EEeccCCCCHhhhhhhC---------------------------------------CCcccHHHHHHHHHHHHHHHHHhc
Q 039276          106 ILECMPHGSLGKCLSTS---------------------------------------NYILDFFQRLHIMIDVASAVEYLH  146 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~---------------------------------------~~~~~~~~~~~i~~~i~~~l~~lH  146 (263)
                      ||||+++++|.+++...                                       ...+++..++.++.|++.||+|||
T Consensus       106 v~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH  185 (345)
T 3hko_A          106 VMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH  185 (345)
T ss_dssp             EEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH
Confidence            99999999999988521                                       111467778899999999999999


Q ss_pred             cCCccccccCCCccccccc-----------------------------ccccccccCc--------------chhhHHHH
Q 039276          147 FGHSTHLLLKEDQSLTQIQ-----------------------------TLATISYMAP--------------DTYNFGIM  183 (263)
Q Consensus       147 ~~~i~h~dlk~~nil~~~~-----------------------------~~g~~~y~aP--------------Dv~SlG~i  183 (263)
                      +++++|+||||+||+....                             ..||+.|+||              |||||||+
T Consensus       186 ~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~i  265 (345)
T 3hko_A          186 NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVL  265 (345)
T ss_dssp             HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHH
T ss_pred             HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHH
Confidence            9999999999999996321                             2467889999              99999999


Q ss_pred             HHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          184 IMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       184 l~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +|||++|+.||...... ........            ...    ....+....+++++.+++.+||+.||++|||+.|+
T Consensus       266 l~el~~g~~pf~~~~~~-~~~~~~~~------------~~~----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~  328 (345)
T 3hko_A          266 LHLLLMGAVPFPGVNDA-DTISQVLN------------KKL----CFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRA  328 (345)
T ss_dssp             HHHHHHSSCSSCCSSHH-HHHHHHHH------------CCC----CTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred             HHHHHHCCCCCCCCChH-HHHHHHHh------------ccc----ccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHH
Confidence            99999999998643111 11111111            000    00111233466779999999999999999998764

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=100.00  E-value=6.4e-38  Score=259.99  Aligned_cols=210  Identities=17%  Similarity=0.207  Sum_probs=171.9

Q ss_pred             ccccccceecccCceEEEEEEec-CCceEEEEEeecCC---CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ-DGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~-~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      .+|...+.||+|+||.||++... +++.+++|.+....   ....+.+.+|+.+++.++|+||+++++++.+.+..+++|
T Consensus        15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   94 (294)
T 2rku_A           15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL   94 (294)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEE
Confidence            56999999999999999999954 58889999997652   234567888999999999999999999999999999999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc----------------------
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ----------------------  165 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~----------------------  165 (263)
                      ||+++++|.+++..... +++..++.++.|++.||+|||+++++|+||+|+||+.+..                      
T Consensus        95 e~~~~~~L~~~~~~~~~-~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~  173 (294)
T 2rku_A           95 ELCRRRSLLELHKRRKA-LTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKK  173 (294)
T ss_dssp             ECCTTCBHHHHHHHHCS-CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBC
T ss_pred             ecCCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCceecccCccccc
Confidence            99999999999876543 8999999999999999999999999999999999995432                      


Q ss_pred             -ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccc
Q 039276          166 -TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHF  232 (263)
Q Consensus       166 -~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (263)
                       ..|++.|+||            ||||||+++++|++|+.||......+ ......            ..        ..
T Consensus       174 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~------------~~--------~~  232 (294)
T 2rku_A          174 VLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE-TYLRIK------------KN--------EY  232 (294)
T ss_dssp             CCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHH------------TT--------CC
T ss_pred             cccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHh------------hc--------cC
Confidence             2467889999            99999999999999999986421110 000000            00        01


Q ss_pred             cchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          233 MTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       233 ~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ..+..+++++.+++.+||+.||++|||++|+
T Consensus       233 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l  263 (294)
T 2rku_A          233 SIPKHINPVAASLIQKMLQTDPTARPTINEL  263 (294)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGG
T ss_pred             CCccccCHHHHHHHHHHcccChhhCcCHHHH
Confidence            1233456679999999999999999999875

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=2.7e-38  Score=277.38  Aligned_cols=211  Identities=20%  Similarity=0.303  Sum_probs=171.5

Q ss_pred             cccccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           31 LFLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      ...|...+.||+|+||.||+|.+.++..||||++.... ...+.+.+|+++++.++||||+++++++.+ +..++||||+
T Consensus       183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~  260 (452)
T 1fmk_A          183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM  260 (452)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred             hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhh
Confidence            35689999999999999999998877889999998653 345678899999999999999999999876 5689999999


Q ss_pred             CCCCHhhhhhhC-CCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc-----------------------
Q 039276          111 PHGSLGKCLSTS-NYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT-----------------------  166 (263)
Q Consensus       111 ~~~~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~-----------------------  166 (263)
                      ++|+|.+++... +..+++..+..++.|++.||+|||+++++||||||+||+.+...                       
T Consensus       261 ~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~  340 (452)
T 1fmk_A          261 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG  340 (452)
T ss_dssp             TTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC------------
T ss_pred             cCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCccceecCCCceecccC
Confidence            999999999753 23388999999999999999999999999999999999954321                       


Q ss_pred             -cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccc
Q 039276          167 -LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHF  232 (263)
Q Consensus       167 -~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (263)
                       .++..|+||            |||||||++|||++ |+.||......  ..            ...+.      ...+.
T Consensus       341 ~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~--~~------------~~~i~------~~~~~  400 (452)
T 1fmk_A          341 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--EV------------LDQVE------RGYRM  400 (452)
T ss_dssp             --CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HH------------HHHHH------TTCCC
T ss_pred             CcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH--HH------------HHHHH------cCCCC
Confidence             245679999            99999999999999 99998642111  00            01110      01122


Q ss_pred             cchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          233 MTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       233 ~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +.+..+++++.+++.+||+.||++|||+++|
T Consensus       401 ~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l  431 (452)
T 1fmk_A          401 PCPPECPESLHDLMCQCWRKEPEERPTFEYL  431 (452)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             CCCCCCCHHHHHHHHHHccCChhhCcCHHHH
Confidence            3355677889999999999999999999764

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=4.6e-38  Score=263.12  Aligned_cols=209  Identities=18%  Similarity=0.155  Sum_probs=165.5

Q ss_pred             ccccccceecccCceEEEEEEec-CCceEEEEEeecCCC--chHHHHHHHHHHHhhc-CCCcceeEeeEeecCCeeEEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ-DGMEVVVKGFNLQYG--GAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~-~~~~v~vK~~~~~~~--~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      .+|+..++||+|+||.||+|... +++.||||++.....  ........|+..+..+ +|+||+++++++.+.+..+++|
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~  136 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT  136 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence            46999999999999999999954 799999999865432  2333445566555555 8999999999999999999999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc----------------------
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ----------------------  165 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~----------------------  165 (263)
                      |++ +++|.+++...+..+++..++.++.|++.||+|||+++++||||||+||+.+..                      
T Consensus       137 e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~  215 (311)
T 3p1a_A          137 ELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEV  215 (311)
T ss_dssp             ECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC------C
T ss_pred             ecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeecccCCCCcc
Confidence            999 669999888766669999999999999999999999999999999999995432                      


Q ss_pred             ccccccccCc-----------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccc
Q 039276          166 TLATISYMAP-----------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT  234 (263)
Q Consensus       166 ~~g~~~y~aP-----------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (263)
                      ..||+.|+||           |||||||+++||++|..|+...    ..+..+.....+                  ...
T Consensus       216 ~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~~~~~~----~~~~~~~~~~~~------------------~~~  273 (311)
T 3p1a_A          216 QEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGG----EGWQQLRQGYLP------------------PEF  273 (311)
T ss_dssp             CCCCGGGCCGGGGGTCCSTHHHHHHHHHHHHHHHHTCCCCSSH----HHHHHHTTTCCC------------------HHH
T ss_pred             cCCCccccCHhHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCc----cHHHHHhccCCC------------------ccc
Confidence            2478999999           9999999999999997765321    111111110000                  012


Q ss_pred             hHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          235 KEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       235 ~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +..+++++.+++.+||+.||++|||++|+
T Consensus       274 ~~~~~~~l~~li~~~L~~dP~~Rpt~~el  302 (311)
T 3p1a_A          274 TAGLSSELRSVLVMMLEPDPKLRATAEAL  302 (311)
T ss_dssp             HTTSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred             ccCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence            34556779999999999999999999864

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=100.00  E-value=3.8e-38  Score=260.88  Aligned_cols=214  Identities=21%  Similarity=0.328  Sum_probs=166.6

Q ss_pred             ccccccceecccCceEEEEEEecCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      .+|...+.||+|+||.||+|...  ..+|+|.+....  ....+.+.+|+.+++.++|+||++++++. .....+++|||
T Consensus        24 ~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~  100 (289)
T 3og7_A           24 GQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQW  100 (289)
T ss_dssp             TSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEEC
T ss_pred             cceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEe
Confidence            45999999999999999999854  359999997653  23456788999999999999999999965 44568999999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc------------------------
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ------------------------  165 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~------------------------  165 (263)
                      +++++|.+++......+++..++.++.|++.||+|||+++++|+||||+||+.+..                        
T Consensus       101 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~  180 (289)
T 3og7_A          101 CEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFE  180 (289)
T ss_dssp             CCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC---------------
T ss_pred             cCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccceecccccccccccccc
Confidence            99999999997666668999999999999999999999999999999999995322                        


Q ss_pred             -ccccccccCc---------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccc
Q 039276          166 -TLATISYMAP---------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSRED  229 (263)
Q Consensus       166 -~~g~~~y~aP---------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (263)
                       ..|++.|+||               |||||||++++|++|+.||......+...............             
T Consensus       181 ~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-------------  247 (289)
T 3og7_A          181 QLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDL-------------  247 (289)
T ss_dssp             ---CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCT-------------
T ss_pred             ccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcch-------------
Confidence             2468889998               99999999999999999986532221111111111100000             


Q ss_pred             ccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          230 EHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       230 ~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                        ......+++++.+++.+||+.||++|||+.+|
T Consensus       248 --~~~~~~~~~~l~~li~~~l~~~p~~Rps~~el  279 (289)
T 3og7_A          248 --SKVRSNCPKRMKRLMAECLKKKRDERPSFPRI  279 (289)
T ss_dssp             --TSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             --hhccccCCHHHHHHHHHHccCChhhCCCHHHH
Confidence              01123566779999999999999999999764

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=100.00  E-value=5.5e-38  Score=265.28  Aligned_cols=211  Identities=17%  Similarity=0.204  Sum_probs=172.6

Q ss_pred             cccccccceecccCceEEEEEEe-cCCceEEEEEeecCC---CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEE
Q 039276           31 LFLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALI  106 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv  106 (263)
                      ..+|...+.||+|+||.||++.. .+++.+++|.+....   ....+.+.+|+.+++.++|+||+++++++.+.+..+++
T Consensus        40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  119 (335)
T 2owb_A           40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV  119 (335)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence            35699999999999999999995 458889999997652   23456788899999999999999999999999999999


Q ss_pred             EeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc---------------------
Q 039276          107 LECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ---------------------  165 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~---------------------  165 (263)
                      |||+++++|.+++..... +++..++.++.|++.||+|||+++++|+||||+||+.+..                     
T Consensus       120 ~e~~~~~~L~~~~~~~~~-l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~  198 (335)
T 2owb_A          120 LELCRRRSLLELHKRRKA-LTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK  198 (335)
T ss_dssp             ECCCTTCBHHHHHHHHCS-CCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTCCB
T ss_pred             EecCCCCCHHHHHhccCC-CCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCceecccCcccc
Confidence            999999999999876543 8999999999999999999999999999999999995432                     


Q ss_pred             --ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccc
Q 039276          166 --TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEH  231 (263)
Q Consensus       166 --~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (263)
                        ..|+..|+||            |||||||++|+|++|+.||......+ .+...            ...        .
T Consensus       199 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~------------~~~--------~  257 (335)
T 2owb_A          199 KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE-TYLRI------------KKN--------E  257 (335)
T ss_dssp             CCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHH------------HHT--------C
T ss_pred             cccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHH-HHHHH------------hcC--------C
Confidence              2468889999            99999999999999999986421110 00000            000        0


Q ss_pred             ccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          232 FMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       232 ~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ...+..+++++.+++.+||+.||++|||++||
T Consensus       258 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el  289 (335)
T 2owb_A          258 YSIPKHINPVAASLIQKMLQTDPTARPTINEL  289 (335)
T ss_dssp             CCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGG
T ss_pred             CCCCccCCHHHHHHHHHHccCChhHCcCHHHH
Confidence            11233456678999999999999999999875

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=100.00  E-value=9.8e-38  Score=258.71  Aligned_cols=212  Identities=20%  Similarity=0.323  Sum_probs=169.3

Q ss_pred             ccccceecccCceEEEEEE-ecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccCC
Q 039276           34 FSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPH  112 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~  112 (263)
                      |.....||+|+||.||+|. ..+++.|++|.+........+.+.+|+.+++.++|+||+++++++.+.+..+++||++++
T Consensus        24 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~  103 (295)
T 2clq_A           24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPG  103 (295)
T ss_dssp             TSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred             CCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCC
Confidence            5556699999999999999 456889999999877666677889999999999999999999999999999999999999


Q ss_pred             CCHhhhhhhCCC--cccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-c-----------------------c
Q 039276          113 GSLGKCLSTSNY--ILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-Q-----------------------T  166 (263)
Q Consensus       113 ~~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-~-----------------------~  166 (263)
                      ++|.+++.....  ..++..++.++.|++.||+|||+++++|+||+|+||+.+. .                       .
T Consensus       104 ~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~  183 (295)
T 2clq_A          104 GSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETF  183 (295)
T ss_dssp             EEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----CCC
T ss_pred             CCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccccCCCCCccccc
Confidence            999999986532  2568888999999999999999999999999999999643 1                       2


Q ss_pred             cccccccCc--------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccc
Q 039276          167 LATISYMAP--------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHF  232 (263)
Q Consensus       167 ~g~~~y~aP--------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (263)
                      .|++.|+||              ||||||+++|+|++|+.||..............               .   .....
T Consensus       184 ~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~---------------~---~~~~~  245 (295)
T 2clq_A          184 TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVG---------------M---FKVHP  245 (295)
T ss_dssp             CCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHH---------------H---HCCCC
T ss_pred             CCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhc---------------c---ccccc
Confidence            467789999              999999999999999999864321111110000               0   00011


Q ss_pred             cchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          233 MTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       233 ~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ..+..+++++.+++.+||+.||++|||++|+
T Consensus       246 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l  276 (295)
T 2clq_A          246 EIPESMSAEAKAFILKCFEPDPDKRACANDL  276 (295)
T ss_dssp             CCCTTSCHHHHHHHHHTTCSSTTTSCCHHHH
T ss_pred             cccccCCHHHHHHHHHHccCChhhCCCHHHH
Confidence            1234566779999999999999999999764

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=1.3e-38  Score=269.17  Aligned_cols=204  Identities=21%  Similarity=0.289  Sum_probs=169.4

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCCC--------chHHHHHHHHHHHhhcCCCcceeEeeEeecCCe
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYG--------GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDF  102 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~--------~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~  102 (263)
                      .+|+..+.||+|+||.||+|. ..+++.||+|.+.....        .....+.+|+.+++.++|+||+++++++.+.+.
T Consensus        24 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~  103 (335)
T 3dls_A           24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGF  103 (335)
T ss_dssp             HHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred             cceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCE
Confidence            469999999999999999998 55689999999976531        123456679999999999999999999999999


Q ss_pred             eEEEEeccCCC-CHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc----------------
Q 039276          103 KALILECMPHG-SLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ----------------  165 (263)
Q Consensus       103 ~~lv~e~~~~~-~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~----------------  165 (263)
                      .+++||++.+| +|.+++..... +++..++.++.|++.||+|||.++++||||||+||+.+..                
T Consensus       104 ~~lv~e~~~~g~~l~~~~~~~~~-l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~  182 (335)
T 3dls_A          104 FQLVMEKHGSGLDLFAFIDRHPR-LDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLER  182 (335)
T ss_dssp             EEEEEECCTTSCBHHHHHHTCCC-CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             EEEEEEeCCCCccHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccceECCC
Confidence            99999999777 99999987654 8999999999999999999999999999999999995432                


Q ss_pred             ------ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccc
Q 039276          166 ------TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLS  226 (263)
Q Consensus       166 ------~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (263)
                            ..||+.|+||             |||||||++|+|++|+.||.....                   ......  
T Consensus       183 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-------------------~~~~~~--  241 (335)
T 3dls_A          183 GKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE-------------------TVEAAI--  241 (335)
T ss_dssp             TCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG-------------------GTTTCC--
T ss_pred             CCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH-------------------HHhhcc--
Confidence                  2478899999             999999999999999999864210                   000000  


Q ss_pred             cccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          227 REDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       227 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                            ..+..+++++.+++.+||+.||++|||++||
T Consensus       242 ------~~~~~~~~~l~~li~~~L~~dP~~Rps~~el  272 (335)
T 3dls_A          242 ------HPPYLVSKELMSLVSGLLQPVPERRTTLEKL  272 (335)
T ss_dssp             ------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             ------CCCcccCHHHHHHHHHHccCChhhCcCHHHH
Confidence                  1122356679999999999999999999764

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=100.00  E-value=5e-38  Score=259.19  Aligned_cols=209  Identities=16%  Similarity=0.176  Sum_probs=170.5

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecC--CCchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCeeEEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQ--YGGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~--~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      .+|+..+.||+|+||.||+|.. .+++.||+|.+...  .......+.+|+..+..+ +||||+++++++.+.+..+++|
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~   90 (289)
T 1x8b_A           11 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQN   90 (289)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEE
T ss_pred             chhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            4699999999999999999995 47999999999865  233456778899999999 9999999999999999999999


Q ss_pred             eccCCCCHhhhhhhCC---CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-------------------
Q 039276          108 ECMPHGSLGKCLSTSN---YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-------------------  165 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-------------------  165 (263)
                      ||+++++|.+++....   ..+++..++.++.|++.||+|||+++++|+||||+||+....                   
T Consensus        91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~  170 (289)
T 1x8b_A           91 EYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNK  170 (289)
T ss_dssp             ECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--------------------C
T ss_pred             EecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCCc
Confidence            9999999999997642   338999999999999999999999999999999999997521                   


Q ss_pred             -------------------ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCC
Q 039276          166 -------------------TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLP  213 (263)
Q Consensus       166 -------------------~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~  213 (263)
                                         ..|+..|+||             |||||||++++|++|..|+...    ..+.......  
T Consensus       171 ~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~----~~~~~~~~~~--  244 (289)
T 1x8b_A          171 VMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG----DQWHEIRQGR--  244 (289)
T ss_dssp             CCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS----HHHHHHHTTC--
T ss_pred             eEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch----hHHHHHHcCC--
Confidence                               1368889999             9999999999999999875321    1111111100  


Q ss_pred             CchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          214 NSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                                .       ...+..+++++.+++.+||+.||++|||+.|+
T Consensus       245 ----------~-------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l  277 (289)
T 1x8b_A          245 ----------L-------PRIPQVLSQEFTELLKVMIHPDPERRPSAMAL  277 (289)
T ss_dssp             ----------C-------CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             ----------C-------CCCCcccCHHHHHHHHHHhCCCcccCCCHHHH
Confidence                      0       11233456779999999999999999999764

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=3e-38  Score=275.18  Aligned_cols=216  Identities=16%  Similarity=0.144  Sum_probs=171.2

Q ss_pred             ccccccceecccCceEEEEEEec-CCceEEEEEeecCC---CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ-DGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~-~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      .+|+..+.||+|+||.||++... +++.||+|++....   ......+.+|+.++..++|+||+++++++.+.+..|+||
T Consensus        74 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~  153 (437)
T 4aw2_A           74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVM  153 (437)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEE
T ss_pred             hheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEE
Confidence            56999999999999999999954 58899999997531   223344778999999999999999999999999999999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-----------------------
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-----------------------  164 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-----------------------  164 (263)
                      ||+++|+|.+++......+++..+..++.|++.||+|||+++|+||||||+||+++.                       
T Consensus       154 Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~~~~  233 (437)
T 4aw2_A          154 DYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQS  233 (437)
T ss_dssp             CCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEEC
T ss_pred             ecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCCCccc
Confidence            999999999999875555899999999999999999999999999999999999532                       


Q ss_pred             -cccccccccCc-----------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccc
Q 039276          165 -QTLATISYMAP-----------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLS  226 (263)
Q Consensus       165 -~~~g~~~y~aP-----------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (263)
                       ...||+.|+||                 |||||||++|||++|+.||..... ...+....            ......
T Consensus       234 ~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~-~~~~~~i~------------~~~~~~  300 (437)
T 4aw2_A          234 SVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL-VETYGKIM------------NHKERF  300 (437)
T ss_dssp             CSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSH-HHHHHHHH------------THHHHC
T ss_pred             ccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCCh-hHHHHhhh------------hccccc
Confidence             13689999999                 999999999999999999864211 01111111            000000


Q ss_pred             cccccccchHHHHHHHHHhhccccccCcCC--CCCccCC
Q 039276          227 REDEHFMTKEQCMSFVFNLAMECTVESPNQ--RINAKEM  263 (263)
Q Consensus       227 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~--Rpt~~ev  263 (263)
                         ..+.....+++++.+++.+||..+|+.  ||+++||
T Consensus       301 ---~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~ei  336 (437)
T 4aw2_A          301 ---QFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDF  336 (437)
T ss_dssp             ---CCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHH
T ss_pred             ---cCCcccccCCHHHHHHHHHHhcccccccCCCCHHHH
Confidence               000112346777999999999988887  8998763

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=9.1e-38  Score=258.27  Aligned_cols=211  Identities=17%  Similarity=0.289  Sum_probs=168.8

Q ss_pred             ccccccc-eecccCceEEEEEEec---CCceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEE
Q 039276           32 FLFSESN-LISRGGFGSIYKAKIQ---DGMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALI  106 (263)
Q Consensus        32 ~~y~~~~-~lg~g~~g~v~~~~~~---~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv  106 (263)
                      ..|...+ .||+|+||.||+|...   ++..||+|.+.... ....+.+.+|+++++.++||||+++++++. .+..+++
T Consensus         9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~lv   87 (287)
T 1u59_A            9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-AEALMLV   87 (287)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEE
T ss_pred             HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEec-CCCcEEE
Confidence            3466665 9999999999999743   57889999998753 335677889999999999999999999994 4568999


Q ss_pred             EeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc---------------------
Q 039276          107 LECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ---------------------  165 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~---------------------  165 (263)
                      ||++++++|.+++......+++..++.++.|++.||+|||+++++|+||+|+||+.+..                     
T Consensus        88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~  167 (287)
T 1u59_A           88 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYY  167 (287)
T ss_dssp             EECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEE
T ss_pred             EEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccceeeeccCccee
Confidence            99999999999997665568999999999999999999999999999999999995321                     


Q ss_pred             -----ccccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccc
Q 039276          166 -----TLATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSR  227 (263)
Q Consensus       166 -----~~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (263)
                           ..+++.|+||            |||||||+++||++ |+.||.....  ......+.            ..    
T Consensus       168 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~~~~~~i~------------~~----  229 (287)
T 1u59_A          168 TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG--PEVMAFIE------------QG----  229 (287)
T ss_dssp             CCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT--HHHHHHHH------------TT----
T ss_pred             eccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH--HHHHHHHh------------cC----
Confidence                 1246779999            99999999999998 9999864311  11111110            00    


Q ss_pred             ccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          228 EDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       228 ~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                        .+...+..+++++.+++.+||+.||++|||+.+|
T Consensus       230 --~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l  263 (287)
T 1u59_A          230 --KRMECPPECPPELYALMSDCWIYKWEDRPDFLTV  263 (287)
T ss_dssp             --CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHH
T ss_pred             --CcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHH
Confidence              1112344667789999999999999999999764

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=1.7e-38  Score=278.30  Aligned_cols=209  Identities=21%  Similarity=0.223  Sum_probs=162.9

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecC---CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQ---YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      .+|+..+.||+|+||.||++. ..+++.||+|++...   .......+.+|+.+++.++||||+++++++.+.+..++||
T Consensus       148 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~  227 (446)
T 4ejn_A          148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVM  227 (446)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEE
T ss_pred             HHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEE
Confidence            569999999999999999999 456899999999754   2334556778999999999999999999999999999999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhcc-CCccccccCCCcccccc----------------------
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHF-GHSTHLLLKEDQSLTQI----------------------  164 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~-~~i~h~dlk~~nil~~~----------------------  164 (263)
                      ||+++++|.+++..... +++..+..++.|++.||+|||+ ++++||||||+||+++.                      
T Consensus       228 e~~~~~~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~  306 (446)
T 4ejn_A          228 EYANGGELFFHLSRERV-FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM  306 (446)
T ss_dssp             CCCSSCBHHHHHHHHSC-CCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-----
T ss_pred             eeCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCCCccc
Confidence            99999999999976554 8999999999999999999998 99999999999999532                      


Q ss_pred             -cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccc
Q 039276          165 -QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEH  231 (263)
Q Consensus       165 -~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (263)
                       ...||+.|+||            |||||||++|||++|+.||.....  ..+...+           ...        .
T Consensus       307 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~i-----------~~~--------~  365 (446)
T 4ejn_A          307 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--EKLFELI-----------LME--------E  365 (446)
T ss_dssp             CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHH-----------HHC--------C
T ss_pred             ccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH--HHHHHHH-----------HhC--------C
Confidence             23579999999            999999999999999999864211  1110000           000        0


Q ss_pred             ccchHHHHHHHHHhhccccccCcCCCC-----CccC
Q 039276          232 FMTKEQCMSFVFNLAMECTVESPNQRI-----NAKE  262 (263)
Q Consensus       232 ~~~~~~~~~~l~~l~~~cl~~~p~~Rp-----t~~e  262 (263)
                      ...+..+++++.+++.+||+.||++||     |++|
T Consensus       366 ~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~e  401 (446)
T 4ejn_A          366 IRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKE  401 (446)
T ss_dssp             CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHH
T ss_pred             CCCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHH
Confidence            112345667799999999999999999     7765

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=5.5e-38  Score=268.42  Aligned_cols=234  Identities=19%  Similarity=0.214  Sum_probs=167.6

Q ss_pred             CcccccccccccceecccCceEEEEEEe-cCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecCC-
Q 039276           26 NNFSGLFLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDD-  101 (263)
Q Consensus        26 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-  101 (263)
                      ..+....+|+..+.||+|+||.||+|.. .+++.||+|++....  ....+.+.+|+++++.++|+||+++++++...+ 
T Consensus        19 ~~~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~   98 (367)
T 1cm8_A           19 TAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDET   98 (367)
T ss_dssp             SEECCBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSS
T ss_pred             ceeeecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCc
Confidence            3344456799999999999999999994 569999999996542  234567889999999999999999999987653 


Q ss_pred             -----eeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------
Q 039276          102 -----FKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------  165 (263)
Q Consensus       102 -----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------  165 (263)
                           ..|++||++ +++|.+++...  .+++..+..++.|++.||+|||+++++||||||+||+.+.+           
T Consensus        99 ~~~~~~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a  175 (367)
T 1cm8_A           99 LDDFTDFYLVMPFM-GTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLA  175 (367)
T ss_dssp             TTTCCCCEEEEECC-SEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             cccCceEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeecc
Confidence                 459999999 77999999763  38899999999999999999999999999999999995432           


Q ss_pred             ---------ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCC---------
Q 039276          166 ---------TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPN---------  214 (263)
Q Consensus       166 ---------~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~---------  214 (263)
                               ..+|+.|+||             |||||||+++||++|+.||...... ..+..........         
T Consensus       176 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~l~~i~~~~g~~~~~~~~~~~  254 (367)
T 1cm8_A          176 RQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHL-DQLKEIMKVTGTPPAEFVQRLQ  254 (367)
T ss_dssp             EECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHHHTCS
T ss_pred             cccccccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCCHHHHHHhh
Confidence                     3578889999             9999999999999999999643111 1111111111111         


Q ss_pred             --chhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          215 --SVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       215 --~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                        .......................+++++.+++.+||+.||++|||++|+
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~  305 (367)
T 1cm8_A          255 SDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEA  305 (367)
T ss_dssp             CHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred             hHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHH
Confidence              0000000000000000011124557789999999999999999998763

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=100.00  E-value=5.1e-38  Score=258.11  Aligned_cols=210  Identities=21%  Similarity=0.282  Sum_probs=167.1

Q ss_pred             ccccccceecccCceEEEEEEec-CCceEEEEEeecCC---CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ-DGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~-~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      .+|...+.||+|+||.||+|... +++.|++|.+....   ....+.+.+|+.+++.++|+||+++++++.+.+..+++|
T Consensus        11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   90 (276)
T 2h6d_A           11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM   90 (276)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence            46999999999999999999954 68999999997542   234567889999999999999999999999999999999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc----------------------
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ----------------------  165 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~----------------------  165 (263)
                      |++++++|.+++..... +++..++.++.|++.||+|||+++++|+||+|+||+.+..                      
T Consensus        91 e~~~~~~L~~~l~~~~~-~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~  169 (276)
T 2h6d_A           91 EYVSGGELFDYICKHGR-VEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRT  169 (276)
T ss_dssp             ECCCSCBHHHHHHHHCS-CCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC------
T ss_pred             eccCCCcHHHHHhccCC-CCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccccccCCCcceec
Confidence            99999999999976554 8899999999999999999999999999999999995432                      


Q ss_pred             ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccc
Q 039276          166 TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHF  232 (263)
Q Consensus       166 ~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (263)
                      ..|++.|+||             ||||||+++++|++|+.||.....     ....         ..+...       ..
T Consensus       170 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-----~~~~---------~~~~~~-------~~  228 (276)
T 2h6d_A          170 SCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV-----PTLF---------KKIRGG-------VF  228 (276)
T ss_dssp             -------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHH---------HHHHHC-------CC
T ss_pred             ccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH-----HHHH---------HHhhcC-------cc
Confidence            2467789999             999999999999999999864210     0000         000000       01


Q ss_pred             cchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          233 MTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       233 ~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ..+..+++++.+++.+||+.||++|||++||
T Consensus       229 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~  259 (276)
T 2h6d_A          229 YIPEYLNRSVATLLMHMLQVDPLKRATIKDI  259 (276)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             cCchhcCHHHHHHHHHHccCChhhCCCHHHH
Confidence            1233456679999999999999999999764

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=7.3e-38  Score=270.54  Aligned_cols=214  Identities=15%  Similarity=0.175  Sum_probs=161.4

Q ss_pred             cccccc-ceecccCceEEEEEEe-cCCceEEEEEeecCCCchHHHHHHHHHHHh-hcCCCcceeEeeEeec----CCeeE
Q 039276           32 FLFSES-NLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGAFKNLDVECNMMK-IIRHQNLIKIISSCSK----DDFKA  104 (263)
Q Consensus        32 ~~y~~~-~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~-~~~h~~i~~~~~~~~~----~~~~~  104 (263)
                      .+|... +.||+|+||.||++.. .+++.||+|++...     ....+|++++. ..+|+||+++++++..    ....|
T Consensus        61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~  135 (400)
T 1nxk_A           61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL  135 (400)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence            456665 6899999999999994 56899999998643     45667888764 4589999999998865    55789


Q ss_pred             EEEeccCCCCHhhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-------------------
Q 039276          105 LILECMPHGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-------------------  164 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-------------------  164 (263)
                      +||||+++|+|.+++.... ..+++..+..++.|++.||+|||+++++||||||+||+++.                   
T Consensus       136 lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~  215 (400)
T 1nxk_A          136 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT  215 (400)
T ss_dssp             EEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred             EEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecccccccC
Confidence            9999999999999998643 34899999999999999999999999999999999999653                   


Q ss_pred             ------cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccc
Q 039276          165 ------QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLS  226 (263)
Q Consensus       165 ------~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (263)
                            ...||+.|+||            |||||||++|||++|+.||..........         .....+.....  
T Consensus       216 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~---------~~~~~i~~~~~--  284 (400)
T 1nxk_A          216 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP---------GMKTRIRMGQY--  284 (400)
T ss_dssp             -----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCC---------SHHHHHHHTCC--
T ss_pred             CCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccH---------HHHHHHHcCcc--
Confidence                  12468889999            99999999999999999996532211100         00000000000  


Q ss_pred             cccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          227 REDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       227 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                        ....+....+++++.+++.+||+.||++|||+.||
T Consensus       285 --~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ei  319 (400)
T 1nxk_A          285 --EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEF  319 (400)
T ss_dssp             --CCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred             --cCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHH
Confidence              00001124567789999999999999999998764

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.3e-37  Score=260.19  Aligned_cols=217  Identities=23%  Similarity=0.312  Sum_probs=165.6

Q ss_pred             ccccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhh--cCCCcceeEeeEeecC----CeeEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKI--IRHQNLIKIISSCSKD----DFKAL  105 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~--~~h~~i~~~~~~~~~~----~~~~l  105 (263)
                      .+|+..+.||+|+||.||+|... ++.||+|++....   ......|.+++..  ++|+||+++++++.+.    ...++
T Consensus        37 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l  112 (337)
T 3mdy_A           37 KQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYL  112 (337)
T ss_dssp             HHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEE
T ss_pred             cceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEE
Confidence            56999999999999999999876 8999999986542   2334445555554  4899999999998776    68899


Q ss_pred             EEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccC--------CccccccCCCcccccc-------------
Q 039276          106 ILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFG--------HSTHLLLKEDQSLTQI-------------  164 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--------~i~h~dlk~~nil~~~-------------  164 (263)
                      +|||+++++|.+++...  .+++..++.++.|++.||+|||.+        +++||||||+||+.+.             
T Consensus       113 v~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~  190 (337)
T 3mdy_A          113 ITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV  190 (337)
T ss_dssp             EECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             EEeccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCce
Confidence            99999999999999765  388999999999999999999998        9999999999999532             


Q ss_pred             --------------cccccccccCc------------------chhhHHHHHHHHHhC----------CCCCccccCCCc
Q 039276          165 --------------QTLATISYMAP------------------DTYNFGIMIMETFSG----------KKPTIKFFHGEM  202 (263)
Q Consensus       165 --------------~~~g~~~y~aP------------------Dv~SlG~il~ell~g----------~~Pf~~~~~~~~  202 (263)
                                    ...||+.|+||                  |||||||++|||++|          ..||........
T Consensus       191 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~  270 (337)
T 3mdy_A          191 KFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDP  270 (337)
T ss_dssp             ECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred             eeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCC
Confidence                          12578899999                  999999999999999          455543322222


Q ss_pred             hhhhHhhhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          203 TLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .............         .............+++++.+++.+||+.||++|||+.||
T Consensus       271 ~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~el  322 (337)
T 3mdy_A          271 SYEDMREIVCIKK---------LRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRV  322 (337)
T ss_dssp             CHHHHHHHHTTSC---------CCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             chhhhHHHHhhhc---------cCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHH
Confidence            2222211111110         011111111235788899999999999999999999864

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=3.4e-38  Score=273.05  Aligned_cols=215  Identities=18%  Similarity=0.184  Sum_probs=169.5

Q ss_pred             cccccccceecccCceEEEEEEe-cCCceEEEEEeecCC---CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEE
Q 039276           31 LFLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALI  106 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv  106 (263)
                      ..+|+..+.||+|+||.||++.. .+++.||+|++....   ......+.+|..++..++|+||+++++++.+.+..|+|
T Consensus        60 ~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV  139 (412)
T 2vd5_A           60 RDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLV  139 (412)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEE
T ss_pred             hhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEE
Confidence            35699999999999999999995 569999999997532   22344577899999999999999999999999999999


Q ss_pred             EeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc----------------------
Q 039276          107 LECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI----------------------  164 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~----------------------  164 (263)
                      |||+++|+|.+++...+..+++..+..++.|++.||+|||+++++||||||+||+++.                      
T Consensus       140 mE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~~~  219 (412)
T 2vd5_A          140 MEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVR  219 (412)
T ss_dssp             ECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEE
T ss_pred             EcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhheeccCCCccc
Confidence            9999999999999875545899999999999999999999999999999999999432                      


Q ss_pred             --cccccccccCc-------------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhc
Q 039276          165 --QTLATISYMAP-------------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSAN  223 (263)
Q Consensus       165 --~~~g~~~y~aP-------------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (263)
                        ...||+.|+||                   |||||||++|||++|+.||..... ...+...            ....
T Consensus       220 ~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~-~~~~~~i------------~~~~  286 (412)
T 2vd5_A          220 SLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADST-AETYGKI------------VHYK  286 (412)
T ss_dssp             CSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSH-HHHHHHH------------HTHH
T ss_pred             cceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCH-HHHHHHH------------Hhcc
Confidence              13689999998                   999999999999999999864211 0111111            1000


Q ss_pred             ccccccccccchHHHHHHHHHhhccccccCcCCCC---CccC
Q 039276          224 LLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRI---NAKE  262 (263)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rp---t~~e  262 (263)
                      .   ..........+++++.+++.+||. +|.+|+   +++|
T Consensus       287 ~---~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~e  324 (412)
T 2vd5_A          287 E---HLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGD  324 (412)
T ss_dssp             H---HCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHH
T ss_pred             c---CcCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHH
Confidence            0   000001124567789999999999 999984   6654

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=100.00  E-value=1.2e-37  Score=262.21  Aligned_cols=212  Identities=23%  Similarity=0.384  Sum_probs=167.7

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceE--EEEEeecC-CCchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCeeEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEV--VVKGFNLQ-YGGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFKALI  106 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v--~vK~~~~~-~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv  106 (263)
                      .+|+..+.||+|+||.||+|. ..++..+  ++|.+... .......+.+|+++++.+ +||||+++++++.+.+..+++
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv  104 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA  104 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence            569999999999999999999 4456654  89988754 234556788999999999 899999999999999999999


Q ss_pred             EeccCCCCHhhhhhhCC---------------CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc-----
Q 039276          107 LECMPHGSLGKCLSTSN---------------YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT-----  166 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~-----  166 (263)
                      |||+++++|.+++....               ..+++..++.++.|++.||+|||+++++|+||||+||+.+...     
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kL~  184 (327)
T 1fvr_A          105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIA  184 (327)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEEC
T ss_pred             EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCCeEEEc
Confidence            99999999999997643               2488999999999999999999999999999999999964321     


Q ss_pred             -----------------cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCch
Q 039276          167 -----------------LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSV  216 (263)
Q Consensus       167 -----------------~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~  216 (263)
                                       .+++.|+||            |||||||++|||++ |+.||......     ....       
T Consensus       185 Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~-----~~~~-------  252 (327)
T 1fvr_A          185 DFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-----ELYE-------  252 (327)
T ss_dssp             CTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHH-------
T ss_pred             ccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH-----HHHH-------
Confidence                             346779999            99999999999998 99998642110     0100       


Q ss_pred             hhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          217 MKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                        .+...      .+...+..+++++.+++.+||+.||++|||++|+
T Consensus       253 --~~~~~------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el  291 (327)
T 1fvr_A          253 --KLPQG------YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQI  291 (327)
T ss_dssp             --HGGGT------CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             --HhhcC------CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHH
Confidence              00000      0112234566779999999999999999998764

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=100.00  E-value=8.2e-38  Score=264.01  Aligned_cols=212  Identities=23%  Similarity=0.389  Sum_probs=169.0

Q ss_pred             ccccccceecccCceEEEEEEe--------cCCceEEEEEeecCC-CchHHHHHHHHHHHhhc-CCCcceeEeeEeecCC
Q 039276           32 FLFSESNLISRGGFGSIYKAKI--------QDGMEVVVKGFNLQY-GGAFKNLDVECNMMKII-RHQNLIKIISSCSKDD  101 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~--------~~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~  101 (263)
                      .+|...+.||+|+||.||+|..        .++..||+|++.... ......+.+|+++++.+ +||||+++++++.+.+
T Consensus        35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~  114 (334)
T 2pvf_A           35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG  114 (334)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             hHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCC
Confidence            4599999999999999999985        246789999997653 23456788999999999 8999999999999999


Q ss_pred             eeEEEEeccCCCCHhhhhhhCCC---------------cccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-
Q 039276          102 FKALILECMPHGSLGKCLSTSNY---------------ILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-  165 (263)
Q Consensus       102 ~~~lv~e~~~~~~L~~~l~~~~~---------------~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-  165 (263)
                      ..++||||+++++|.+++.....               .+++..++.++.|++.||+|||+++++|+||||+||+.+.. 
T Consensus       115 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~  194 (334)
T 2pvf_A          115 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN  194 (334)
T ss_dssp             CCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC
T ss_pred             ceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEcCCC
Confidence            99999999999999999976432               27888999999999999999999999999999999995321 


Q ss_pred             ------------------------ccccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHh
Q 039276          166 ------------------------TLATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWV  208 (263)
Q Consensus       166 ------------------------~~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~  208 (263)
                                              ..+++.|+||            |||||||++|||++ |+.||.....  ..+... 
T Consensus       195 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~~~~~~-  271 (334)
T 2pvf_A          195 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV--EELFKL-  271 (334)
T ss_dssp             CEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HHHHHH-
T ss_pred             CEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCH--HHHHHH-
Confidence                                    2346679999            99999999999999 9999864211  011100 


Q ss_pred             hhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          209 NDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                                 +...      .+...+..+++++.+++.+||+.||.+|||+.||
T Consensus       272 -----------~~~~------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el  309 (334)
T 2pvf_A          272 -----------LKEG------HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQL  309 (334)
T ss_dssp             -----------HHHT------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             -----------HhcC------CCCCCCccCCHHHHHHHHHHccCChhhCcCHHHH
Confidence                       0000      0111234566779999999999999999999764

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=100.00  E-value=1.5e-37  Score=259.50  Aligned_cols=209  Identities=22%  Similarity=0.318  Sum_probs=167.1

Q ss_pred             ccccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccC
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMP  111 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~  111 (263)
                      .+|+..+.||+|+||.||++... ++.||+|.+...  ...+.+.+|+++++.++||||+++++++.+  ..++||||++
T Consensus         8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~   82 (307)
T 2eva_A            8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAE   82 (307)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCT
T ss_pred             hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCC
Confidence            45999999999999999999876 789999998644  356778899999999999999999998874  3799999999


Q ss_pred             CCCHhhhhhhCCC--cccHHHHHHHHHHHHHHHHHhcc---CCccccccCCCccccccc---------------------
Q 039276          112 HGSLGKCLSTSNY--ILDFFQRLHIMIDVASAVEYLHF---GHSTHLLLKEDQSLTQIQ---------------------  165 (263)
Q Consensus       112 ~~~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~lH~---~~i~h~dlk~~nil~~~~---------------------  165 (263)
                      +++|.+++.....  .++...++.++.|++.||+|||+   ++++|+||||+||+....                     
T Consensus        83 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~~  162 (307)
T 2eva_A           83 GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTN  162 (307)
T ss_dssp             TCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC----------
T ss_pred             CCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccccccc
Confidence            9999999986543  26788899999999999999999   899999999999995321                     


Q ss_pred             ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccccc
Q 039276          166 TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFM  233 (263)
Q Consensus       166 ~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (263)
                      ..|++.|+||            |||||||+++||++|+.||...............                  ...+.+
T Consensus       163 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~------------------~~~~~~  224 (307)
T 2eva_A          163 NKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVH------------------NGTRPP  224 (307)
T ss_dssp             --CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHH------------------TTCCCC
T ss_pred             CCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHh------------------cCCCCC
Confidence            2468889999            9999999999999999998643221111100000                  001112


Q ss_pred             chHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          234 TKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       234 ~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ....+++.+.+++.+||+.||++|||+++|
T Consensus       225 ~~~~~~~~l~~li~~~l~~dp~~Rps~~el  254 (307)
T 2eva_A          225 LIKNLPKPIESLMTRCWSKDPSQRPSMEEI  254 (307)
T ss_dssp             CBTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             cccccCHHHHHHHHHHhcCChhhCcCHHHH
Confidence            234566779999999999999999999764

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=9.4e-38  Score=274.42  Aligned_cols=159  Identities=20%  Similarity=0.245  Sum_probs=127.6

Q ss_pred             cccccccceecccCceEEEEEE-ecCCceEEEEEeecC--CCchHHHHHHHHHHHhhcCCCcceeEeeEeec-----CCe
Q 039276           31 LFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQ--YGGAFKNLDVECNMMKIIRHQNLIKIISSCSK-----DDF  102 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----~~~  102 (263)
                      ..+|+..+.||+|+||.||+|. ..+++.||||++...  .....+++.+|+.+++.++|+||+++++++..     ...
T Consensus        52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  131 (458)
T 3rp9_A           52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE  131 (458)
T ss_dssp             CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence            4679999999999999999998 456899999999654  23356778899999999999999999999843     356


Q ss_pred             eEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------
Q 039276          103 KALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------  165 (263)
Q Consensus       103 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------  165 (263)
                      .|+|||++. ++|.+++..... +++..+..++.||+.||+|||+++|+||||||+||+++..                 
T Consensus       132 ~~lv~e~~~-~~L~~~~~~~~~-l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~  209 (458)
T 3rp9_A          132 LYVVLEIAD-SDFKKLFRTPVY-LTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYP  209 (458)
T ss_dssp             EEEEECCCS-EEHHHHHHSSCC-CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSC
T ss_pred             EEEEEeccc-cchhhhcccCCC-CCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchhccCc
Confidence            899999984 699999876543 8999999999999999999999999999999999995322                 


Q ss_pred             ---------------------------------ccccccccCc-------------chhhHHHHHHHHHhCC
Q 039276          166 ---------------------------------TLATISYMAP-------------DTYNFGIMIMETFSGK  191 (263)
Q Consensus       166 ---------------------------------~~g~~~y~aP-------------Dv~SlG~il~ell~g~  191 (263)
                                                       ..||+.|+||             |||||||++|||++|.
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~  281 (458)
T 3rp9_A          210 ENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMI  281 (458)
T ss_dssp             TTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTS
T ss_pred             cccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhc
Confidence                                             2458889999             9999999999999943

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=8.8e-38  Score=261.14  Aligned_cols=212  Identities=17%  Similarity=0.202  Sum_probs=170.6

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCCC---chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYG---GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~---~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      .+|...+.||+|+||.||++.. .+++.||+|++.....   ...+.+.+|+.+++.++||||+++++++.+.+..++++
T Consensus        34 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  113 (309)
T 2h34_A           34 GPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDM  113 (309)
T ss_dssp             CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             ccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEE
Confidence            5699999999999999999994 4688999999976522   23467889999999999999999999999999999999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc----------------------
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ----------------------  165 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~----------------------  165 (263)
                      |++++++|.+++..... +++..++.++.|++.||+|||+++++|+||+|+||+.+..                      
T Consensus       114 e~~~~~~L~~~l~~~~~-~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~  192 (309)
T 2h34_A          114 RLINGVDLAAMLRRQGP-LAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQL  192 (309)
T ss_dssp             ECCCCEEHHHHHHHHCS-CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC------------
T ss_pred             EecCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCccccccccccc
Confidence            99999999999986543 8999999999999999999999999999999999995421                      


Q ss_pred             --ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccc
Q 039276          166 --TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEH  231 (263)
Q Consensus       166 --~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (263)
                        ..|++.|+||            ||||||+++|+|++|+.||......  .+........                ...
T Consensus       193 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~----------------~~~  254 (309)
T 2h34_A          193 GNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--VMGAHINQAI----------------PRP  254 (309)
T ss_dssp             ----CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--HHHHHHHSCC----------------CCG
T ss_pred             cccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--HHHHHhccCC----------------CCc
Confidence              2467889999            9999999999999999998642110  1111111000                000


Q ss_pred             ccchHHHHHHHHHhhccccccCcCCCC-CccC
Q 039276          232 FMTKEQCMSFVFNLAMECTVESPNQRI-NAKE  262 (263)
Q Consensus       232 ~~~~~~~~~~l~~l~~~cl~~~p~~Rp-t~~e  262 (263)
                      ......+++++.+++.+||+.||++|| |+++
T Consensus       255 ~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~  286 (309)
T 2h34_A          255 STVRPGIPVAFDAVIARGMAKNPEDRYVTCGD  286 (309)
T ss_dssp             GGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHH
T ss_pred             cccCCCCCHHHHHHHHHhccCCHHHHHHhHHH
Confidence            112345666799999999999999999 7665

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=100.00  E-value=1.3e-37  Score=261.54  Aligned_cols=214  Identities=21%  Similarity=0.206  Sum_probs=166.9

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCCC--------chHHHHHHHHHHHhhcCCCcceeEeeEeecCCe
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYG--------GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDF  102 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~--------~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~  102 (263)
                      .+|...+.||+|+||.||+|.. .+++.||||++.....        .....+.+|+++++.++|+||+++++++.... 
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-   88 (322)
T 2ycf_A           10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-   88 (322)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-
T ss_pred             hceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-
Confidence            4699999999999999999984 5689999999965421        22345778999999999999999999987665 


Q ss_pred             eEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------
Q 039276          103 KALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------  165 (263)
Q Consensus       103 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------  165 (263)
                      .+++|||+++++|.+++..... +++..++.++.|++.||+|||.++++|+||||+||+....                 
T Consensus        89 ~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~  167 (322)
T 2ycf_A           89 YYIVLELMEGGELFDKVVGNKR-LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL  167 (322)
T ss_dssp             EEEEEECCTTEETHHHHSTTCC-CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEEC
T ss_pred             eEEEEecCCCCcHHHHHhccCC-CCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccceec
Confidence            7999999999999999876544 8999999999999999999999999999999999996421                 


Q ss_pred             --------ccccccccCc---------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhh
Q 039276          166 --------TLATISYMAP---------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSA  222 (263)
Q Consensus       166 --------~~g~~~y~aP---------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (263)
                              ..|++.|+||               |||||||++|+|++|+.||...................         
T Consensus       168 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~---------  238 (322)
T 2ycf_A          168 GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN---------  238 (322)
T ss_dssp             CCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCC---------
T ss_pred             ccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccc---------
Confidence                    1368889998               99999999999999999997542222211111110000         


Q ss_pred             cccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          223 NLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                             ........+++++.+++.+||+.||++|||+.++
T Consensus       239 -------~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~  272 (322)
T 2ycf_A          239 -------FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEA  272 (322)
T ss_dssp             -------CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred             -------cCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHH
Confidence                   0001123456779999999999999999998764

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=100.00  E-value=1.4e-37  Score=261.82  Aligned_cols=227  Identities=20%  Similarity=0.328  Sum_probs=174.1

Q ss_pred             ccccccceecccCceEEEEEEe-----cCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCC--eeE
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-----QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDD--FKA  104 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-----~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--~~~  104 (263)
                      ..|+..+.||+|+||.||++..     .+++.||+|.+........+.+.+|+++++.++|+||+++++++...+  ..+
T Consensus        41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  120 (326)
T 2w1i_A           41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK  120 (326)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred             HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence            4599999999999999999983     358899999998776667778999999999999999999999986543  689


Q ss_pred             EEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-------------------
Q 039276          105 LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-------------------  165 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-------------------  165 (263)
                      ++||++++++|.+++......+++..++.++.|++.||+|||.++++|+||||+||+.+..                   
T Consensus       121 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~  200 (326)
T 2w1i_A          121 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE  200 (326)
T ss_dssp             EEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCSSCS
T ss_pred             EEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCcchhhcccccc
Confidence            9999999999999998766568999999999999999999999999999999999995422                   


Q ss_pred             -------ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchh-hhhhhccc
Q 039276          166 -------TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVM-KVVSANLL  225 (263)
Q Consensus       166 -------~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  225 (263)
                             ..++..|+||            |||||||+++||++|..||.....   .+............. ..+.... 
T Consensus       201 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-  276 (326)
T 2w1i_A          201 YYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA---EFMRMIGNDKQGQMIVFHLIELL-  276 (326)
T ss_dssp             EEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHH---HHHHHHCTTCCTHHHHHHHHHHH-
T ss_pred             ccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHH---HHHHhhccccchhhhHHHHHHHh-
Confidence                   1345569999            999999999999999999763210   011111100000000 0000000 


Q ss_pred             ccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          226 SREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       226 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                       ....+.+.+..+++++.+++.+||+.||++|||+.||
T Consensus       277 -~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el  313 (326)
T 2w1i_A          277 -KNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL  313 (326)
T ss_dssp             -HTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             -hcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHH
Confidence             0111223355677889999999999999999999764

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=1.6e-38  Score=267.32  Aligned_cols=230  Identities=17%  Similarity=0.202  Sum_probs=168.6

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCCCc-hHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGG-AFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~-~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      ++|...+.||+|+||.||+|.. .+++.||+|++...... ....+.+|+++++.++|+||+++++++.+.+..++||||
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   81 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence            3599999999999999999995 46899999999755321 122344699999999999999999999999999999999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------c
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------T  166 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------~  166 (263)
                      +++ +|.+++......+++..+..++.|++.||+|||+++++||||||+||+.+..                       .
T Consensus        82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~  160 (324)
T 3mtl_A           82 LDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNE  160 (324)
T ss_dssp             CSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC----------
T ss_pred             ccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccCCccccccc
Confidence            975 9999998766668999999999999999999999999999999999995432                       2


Q ss_pred             cccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhc---CCCchhhhhhhcc-----c
Q 039276          167 LATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDL---LPNSVMKVVSANL-----L  225 (263)
Q Consensus       167 ~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-----~  225 (263)
                      .||+.|+||             |||||||++|+|++|+.||...... ..+.......   .............     .
T Consensus       161 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (324)
T 3mtl_A          161 VVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVE-EQLHFIFRILGTPTEETWPGILSNEEFKTYNY  239 (324)
T ss_dssp             --CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCC
T ss_pred             cCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCChHhchhhhcchhhccccc
Confidence            468889999             9999999999999999999643211 1111111111   1111111100000     0


Q ss_pred             cc--ccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          226 SR--EDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       226 ~~--~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ..  ..........+++++.+++.+||+.||++|||++|+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~  279 (324)
T 3mtl_A          240 PKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDA  279 (324)
T ss_dssp             CCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             ccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHH
Confidence            00  000001123456779999999999999999999864

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=100.00  E-value=6.6e-38  Score=258.63  Aligned_cols=210  Identities=23%  Similarity=0.274  Sum_probs=171.7

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCC---CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      ++|+..+.||+|+||.||+|.. .++..||+|++....   ......+.+|+++++.++|+||+++++++.+.+..+++|
T Consensus        14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   93 (284)
T 2vgo_A           14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML   93 (284)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence            4599999999999999999995 458889999996542   233567889999999999999999999999999999999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc---------------------c
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ---------------------T  166 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~---------------------~  166 (263)
                      ||+++++|.+++..... +++..+..++.|++.||+|||+++++|+||+|+||+.+..                     .
T Consensus        94 e~~~~~~L~~~l~~~~~-~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  172 (284)
T 2vgo_A           94 EFAPRGELYKELQKHGR-FDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRTM  172 (284)
T ss_dssp             CCCTTEEHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSCBCCC
T ss_pred             EeCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecccccccCcccccccc
Confidence            99999999999987554 8999999999999999999999999999999999995421                     2


Q ss_pred             cccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccc
Q 039276          167 LATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT  234 (263)
Q Consensus       167 ~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (263)
                      .|++.|+||            ||||||+++++|++|+.||...... ........            .        ....
T Consensus       173 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~~~------------~--------~~~~  231 (284)
T 2vgo_A          173 CGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT-ETHRRIVN------------V--------DLKF  231 (284)
T ss_dssp             CSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHT------------T--------CCCC
T ss_pred             cCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh-HHHHHHhc------------c--------ccCC
Confidence            468889999            9999999999999999998642111 00000000            0        0112


Q ss_pred             hHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          235 KEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       235 ~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +..+++++.+++.+||+.||.+|||++++
T Consensus       232 ~~~~~~~~~~li~~~l~~~p~~Rps~~~l  260 (284)
T 2vgo_A          232 PPFLSDGSKDLISKLLRYHPPQRLPLKGV  260 (284)
T ss_dssp             CTTSCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             CCcCCHHHHHHHHHHhhcCHhhCCCHHHH
Confidence            34456679999999999999999999764

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=3.8e-37  Score=262.40  Aligned_cols=163  Identities=22%  Similarity=0.260  Sum_probs=143.2

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCCCchHHHHHHHHHHHhhcC-----CCcceeEeeEeecCCeeEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIR-----HQNLIKIISSCSKDDFKAL  105 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~-----h~~i~~~~~~~~~~~~~~l  105 (263)
                      .+|...+.||+|+||.||+|.. .+++.||+|++... .........|+++++.+.     |+||+++++++......++
T Consensus        35 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~l  113 (360)
T 3llt_A           35 NAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCL  113 (360)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEE
T ss_pred             CEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEE
Confidence            5699999999999999999995 56899999998753 234456677999999886     9999999999999999999


Q ss_pred             EEeccCCCCHhhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc--------------------
Q 039276          106 ILECMPHGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI--------------------  164 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~--------------------  164 (263)
                      |||++ +++|.+++.... ..+++..+..++.|++.||+|||+++++||||||+||+.+.                    
T Consensus       114 v~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~  192 (360)
T 3llt_A          114 IFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQ  192 (360)
T ss_dssp             EECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEE
T ss_pred             EEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhccccccccc
Confidence            99999 889999998654 23889999999999999999999999999999999999752                    


Q ss_pred             -------------------------cccccccccCc------------chhhHHHHHHHHHhCCCCCcc
Q 039276          165 -------------------------QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIK  196 (263)
Q Consensus       165 -------------------------~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~  196 (263)
                                               ...||+.|+||            |||||||++|+|++|+.||..
T Consensus       193 ~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  261 (360)
T 3llt_A          193 IYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRT  261 (360)
T ss_dssp             EEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             ccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCC
Confidence                                     12468899999            999999999999999999964

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=100.00  E-value=1.7e-37  Score=260.42  Aligned_cols=223  Identities=20%  Similarity=0.331  Sum_probs=170.5

Q ss_pred             ccccceecccCceEEEEEEec-----CCceEEEEEeecCCC-chHHHHHHHHHHHhhcCCCcceeEeeEeec--CCeeEE
Q 039276           34 FSESNLISRGGFGSIYKAKIQ-----DGMEVVVKGFNLQYG-GAFKNLDVECNMMKIIRHQNLIKIISSCSK--DDFKAL  105 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~~-----~~~~v~vK~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~l  105 (263)
                      |+..+.||+|+||.||++++.     +++.||+|++..... ...+.+.+|+++++.++|+||+++++++.+  ....++
T Consensus        33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l  112 (318)
T 3lxp_A           33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL  112 (318)
T ss_dssp             EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred             HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence            499999999999999988642     578899999986632 346678899999999999999999999976  357899


Q ss_pred             EEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc--------------------
Q 039276          106 ILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ--------------------  165 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~--------------------  165 (263)
                      +|||+++++|.+++....  +++..++.++.|++.||+|||+++++|+||||+||+.+..                    
T Consensus       113 v~e~~~~~~L~~~l~~~~--~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~  190 (318)
T 3lxp_A          113 VMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEY  190 (318)
T ss_dssp             EECCCTTCBHHHHGGGSC--CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTTCSE
T ss_pred             EEecccCCcHHHHHhhCC--CCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCccccccccccccc
Confidence            999999999999997654  8899999999999999999999999999999999995332                    


Q ss_pred             ------ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccc
Q 039276          166 ------TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSR  227 (263)
Q Consensus       166 ------~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (263)
                            ..++..|+||            |||||||++++|++|+.||..........   ..  ................
T Consensus       191 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~  265 (318)
T 3lxp_A          191 YRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLEL---IG--IAQGQMTVLRLTELLE  265 (318)
T ss_dssp             EEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHH---HC--SCCHHHHHHHHHHHHH
T ss_pred             cccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhh---hc--ccccchhHHHHHHHHh
Confidence                  2356669999            99999999999999999986432110000   00  0000000000000001


Q ss_pred             ccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          228 EDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       228 ~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .....+.+..+++++.+++.+||+.||++|||++||
T Consensus       266 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~el  301 (318)
T 3lxp_A          266 RGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENL  301 (318)
T ss_dssp             TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             cccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHH
Confidence            111223455677889999999999999999999764

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=4.9e-38  Score=268.43  Aligned_cols=221  Identities=14%  Similarity=0.152  Sum_probs=165.6

Q ss_pred             ccccccceecccCceEEEEEEecC------CceEEEEEeecCCCchH-----------HHHHHHHHHHhhcCCCcceeEe
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQD------GMEVVVKGFNLQYGGAF-----------KNLDVECNMMKIIRHQNLIKII   94 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~------~~~v~vK~~~~~~~~~~-----------~~~~~e~~~l~~~~h~~i~~~~   94 (263)
                      .+|...+.||+|+||.||+|....      ++.||+|++........           .....|+..+..++|+||++++
T Consensus        35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~  114 (364)
T 3op5_A           35 AAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYW  114 (364)
T ss_dssp             CEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEE
T ss_pred             CeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEE
Confidence            369999999999999999998543      47899999876532111           1123355567778899999999


Q ss_pred             eEeecC----CeeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccc--cc---
Q 039276           95 SSCSKD----DFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQ--IQ---  165 (263)
Q Consensus        95 ~~~~~~----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~--~~---  165 (263)
                      +++...    ...+++|||+ +++|.+++......+++..++.++.|++.||+|||+++++||||||+||+++  ..   
T Consensus       115 ~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~~~  193 (364)
T 3op5_A          115 GSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQV  193 (364)
T ss_dssp             EEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCTTCE
T ss_pred             eeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCCCeE
Confidence            998654    4589999999 9999999987656699999999999999999999999999999999999965  21   


Q ss_pred             ---------------------------ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhh
Q 039276          166 ---------------------------TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKH  206 (263)
Q Consensus       166 ---------------------------~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~  206 (263)
                                                 ..||+.|+||            |||||||++|||++|+.||.......... .
T Consensus       194 kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~-~  272 (364)
T 3op5_A          194 YLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYV-R  272 (364)
T ss_dssp             EECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHH-H
T ss_pred             EEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHH-H
Confidence                                       1288899999            99999999999999999997532221111 1


Q ss_pred             HhhhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          207 WVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ............+.+..+         ....+++++.+++..||+.+|++||++++|
T Consensus       273 ~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~li~~cl~~~p~~RP~~~~l  320 (364)
T 3op5_A          273 DSKIRYRENIASLMDKCF---------PAANAPGEIAKYMETVKLLDYTEKPLYENL  320 (364)
T ss_dssp             HHHHHHHHCHHHHHHHHS---------CTTCCCHHHHHHHHHHHTCCTTCCCCHHHH
T ss_pred             HHHHHhhhhHHHHHHHhc---------ccccCHHHHHHHHHHHhcCCCCCCCCHHHH
Confidence            111111111111111111         013446779999999999999999998764

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=9.8e-38  Score=262.91  Aligned_cols=211  Identities=20%  Similarity=0.335  Sum_probs=168.9

Q ss_pred             ccccccceecccCceEEEEEEe-cCCce----EEEEEeecC-CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGME----VVVKGFNLQ-YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKAL  105 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~----v~vK~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l  105 (263)
                      .+|+..+.||+|+||.||+|.. .+++.    |++|.+... .....+.+.+|+.+++.++||||+++++++.+.. .++
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~   93 (327)
T 3lzb_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL   93 (327)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEE
T ss_pred             hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceE
Confidence            4699999999999999999984 44544    577777544 3445678889999999999999999999998765 789


Q ss_pred             EEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc--------------------
Q 039276          106 ILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ--------------------  165 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~--------------------  165 (263)
                      ++|++++++|.+++......+++..++.++.|++.||+|||+++++||||||+||+.+..                    
T Consensus        94 v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~  173 (327)
T 3lzb_A           94 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE  173 (327)
T ss_dssp             EECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC----------
T ss_pred             EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCcccc
Confidence            999999999999998766668999999999999999999999999999999999995432                    


Q ss_pred             -----ccccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccc
Q 039276          166 -----TLATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSR  227 (263)
Q Consensus       166 -----~~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (263)
                           ..+++.|+||            |||||||++|||++ |+.||......  .+.            ..+...    
T Consensus       174 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~~~------------~~~~~~----  235 (327)
T 3lzb_A          174 YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EIS------------SILEKG----  235 (327)
T ss_dssp             ------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHH------------HHHHTT----
T ss_pred             ccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH--HHH------------HHHHcC----
Confidence                 1346679999            99999999999999 99998643211  111            111111    


Q ss_pred             ccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          228 EDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       228 ~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                        .+.+.+..++.++.+++.+||+.||++|||+.||
T Consensus       236 --~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el  269 (327)
T 3lzb_A          236 --ERLPQPPICTIDVYMIMRKCWMIDADSRPKFREL  269 (327)
T ss_dssp             --CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             --CCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence              1112344566779999999999999999999864

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=6.7e-38  Score=263.17  Aligned_cols=212  Identities=23%  Similarity=0.403  Sum_probs=161.5

Q ss_pred             ccccccceecccCceEEEEEEecC-C---ceEEEEEeecC--CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCee--
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQD-G---MEVVVKGFNLQ--YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFK--  103 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~-~---~~v~vK~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~--  103 (263)
                      .+|+..+.||+|+||.||+|.... +   ..||+|.+...  .....+.+.+|+++++.++|+||+++++++.+....  
T Consensus        23 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  102 (323)
T 3qup_A           23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGR  102 (323)
T ss_dssp             --CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-----
T ss_pred             hHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccC
Confidence            459999999999999999998443 3   37999999765  344567888999999999999999999999776544  


Q ss_pred             ----EEEEeccCCCCHhhhhhhCC-----CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc---------
Q 039276          104 ----ALILECMPHGSLGKCLSTSN-----YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ---------  165 (263)
Q Consensus       104 ----~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~---------  165 (263)
                          ++++||+++++|.+++....     ..+++..++.++.|++.||+|||+++++||||||+||+.+..         
T Consensus       103 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~~~kl~Dfg  182 (323)
T 3qup_A          103 LPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFG  182 (323)
T ss_dssp             --CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCC
T ss_pred             CCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCCCEEEeecc
Confidence                99999999999999986432     138899999999999999999999999999999999995432         


Q ss_pred             ----------------ccccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCch
Q 039276          166 ----------------TLATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSV  216 (263)
Q Consensus       166 ----------------~~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~  216 (263)
                                      ..+++.|+||            |||||||++|||++ |+.||......+ .......       
T Consensus       183 ~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~-~~~~~~~-------  254 (323)
T 3qup_A          183 LSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE-IYNYLIG-------  254 (323)
T ss_dssp             C-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG-HHHHHHT-------
T ss_pred             ccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH-HHHHHhc-------
Confidence                            1345679999            99999999999999 999986432111 1110100       


Q ss_pred             hhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          217 MKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                                  ......+..+++++.+++.+||+.||++|||+.+|
T Consensus       255 ------------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l  289 (323)
T 3qup_A          255 ------------GNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCL  289 (323)
T ss_dssp             ------------TCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHH
T ss_pred             ------------CCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHH
Confidence                        00112234566779999999999999999997653

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.1e-37  Score=263.20  Aligned_cols=212  Identities=23%  Similarity=0.377  Sum_probs=170.6

Q ss_pred             ccccccceecccCceEEEEEEecC-----CceEEEEEeecCCC-chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQD-----GMEVVVKGFNLQYG-GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKAL  105 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~-----~~~v~vK~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l  105 (263)
                      .+|...+.||+|+||.||+|....     +..||+|.+..... .....+.+|+.+++.++|+||+++++++.+.+..++
T Consensus        44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  123 (333)
T 1mqb_A           44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI  123 (333)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence            568889999999999999998432     24599999976532 345568899999999999999999999999899999


Q ss_pred             EEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc-------------------
Q 039276          106 ILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT-------------------  166 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~-------------------  166 (263)
                      ||||+++++|.+++......+++..++.++.|++.||+|||+++++|+||||+||+.+...                   
T Consensus       124 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~  203 (333)
T 1mqb_A          124 ITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA  203 (333)
T ss_dssp             EEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC----------
T ss_pred             EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcchhhcccccc
Confidence            9999999999999987655689999999999999999999999999999999999954321                   


Q ss_pred             -------cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccc
Q 039276          167 -------LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLS  226 (263)
Q Consensus       167 -------~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (263)
                             .++..|+||            |||||||++|||++ |+.||......  .+.            ..+..    
T Consensus       204 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~--~~~------------~~~~~----  265 (333)
T 1mqb_A          204 TYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH--EVM------------KAIND----  265 (333)
T ss_dssp             -------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHH------------HHHHT----
T ss_pred             ccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH--HHH------------HHHHC----
Confidence                   235679999            99999999999999 99998542110  000            00000    


Q ss_pred             cccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          227 REDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       227 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                        ..+.+.+..+++++.+++.+||+.||++|||+.+|
T Consensus       266 --~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l  300 (333)
T 1mqb_A          266 --GFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADI  300 (333)
T ss_dssp             --TCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred             --CCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence              01112234566779999999999999999998764

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=100.00  E-value=4.5e-38  Score=261.60  Aligned_cols=221  Identities=21%  Similarity=0.249  Sum_probs=155.9

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      .+|+..+.||+|+||.||++. ..+++.||+|.+.... ......+.+|+.+++.++||||+++++++...+..+++|||
T Consensus        15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   94 (303)
T 2vwi_A           15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKL   94 (303)
T ss_dssp             CCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEEC
T ss_pred             hhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehh
Confidence            459999999999999999998 4568999999987553 23456678899999999999999999999999999999999


Q ss_pred             cCCCCHhhhhhh-------CCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------
Q 039276          110 MPHGSLGKCLST-------SNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------  165 (263)
Q Consensus       110 ~~~~~L~~~l~~-------~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------  165 (263)
                      +++++|.+++..       ....+++..++.++.|++.||+|||+++++|+||+|+||+.+..                 
T Consensus        95 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~  174 (303)
T 2vwi_A           95 LSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATG  174 (303)
T ss_dssp             CTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC--
T ss_pred             ccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccchheeccC
Confidence            999999999874       23348899999999999999999999999999999999995321                 


Q ss_pred             -----------ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhh
Q 039276          166 -----------TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVS  221 (263)
Q Consensus       166 -----------~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (263)
                                 ..|++.|+||             |||||||++++|++|+.||........... .............  
T Consensus       175 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~-~~~~~~~~~~~~~--  251 (303)
T 2vwi_A          175 GDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLML-TLQNDPPSLETGV--  251 (303)
T ss_dssp             -------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHH-HHTSSCCCTTC----
T ss_pred             CCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHH-HhccCCCcccccc--
Confidence                       2468889999             999999999999999999875422211111 1110000000000  


Q ss_pred             hcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          222 ANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                              ........+++++.+++.+||+.||++|||+.||
T Consensus       252 --------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l  285 (303)
T 2vwi_A          252 --------QDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAEL  285 (303)
T ss_dssp             -----------CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred             --------ccchhhhhhhHHHHHHHHHHccCChhhCcCHHHH
Confidence                    0001123455679999999999999999999764

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=100.00  E-value=1.8e-37  Score=259.46  Aligned_cols=213  Identities=23%  Similarity=0.338  Sum_probs=168.8

Q ss_pred             cccccccceecccCceEEEEEEe-cCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           31 LFLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      ...|+..+.||+|+||.||+|.. .+++.||+|.+....  ..+.+.+|+.+++.++|+||+++++++.+.+..+++|||
T Consensus        28 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (314)
T 3com_A           28 EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEY  105 (314)
T ss_dssp             --CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeec
Confidence            45699999999999999999995 458999999998653  446788999999999999999999999999999999999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------c
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------T  166 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------~  166 (263)
                      +++++|.+++......+++..++.++.|++.||.|||.++++|+||+|+||+.+..                       .
T Consensus       106 ~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~  185 (314)
T 3com_A          106 CGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTV  185 (314)
T ss_dssp             CTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBCCC
T ss_pred             CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhccccCcc
Confidence            99999999997555558999999999999999999999999999999999995321                       2


Q ss_pred             cccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccc
Q 039276          167 LATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT  234 (263)
Q Consensus       167 ~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (263)
                      .|++.|+||            ||||||+++|+|++|+.||......    ....          ..    ..........
T Consensus       186 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~----------~~----~~~~~~~~~~  247 (314)
T 3com_A          186 IGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPM----RAIF----------MI----PTNPPPTFRK  247 (314)
T ss_dssp             CSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHH----HHHH----------HH----HHSCCCCCSS
T ss_pred             CCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChH----HHHH----------HH----hcCCCcccCC
Confidence            468889999            9999999999999999998642111    0000          00    0000111122


Q ss_pred             hHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          235 KEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       235 ~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +..+++++.+++.+||..||.+|||+.++
T Consensus       248 ~~~~~~~l~~li~~~l~~dp~~Rpt~~~l  276 (314)
T 3com_A          248 PELWSDNFTDFVKQCLVKSPEQRATATQL  276 (314)
T ss_dssp             GGGSCHHHHHHHHHHTCSCTTTSCCHHHH
T ss_pred             cccCCHHHHHHHHHHccCChhhCcCHHHH
Confidence            44566779999999999999999999764

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=100.00  E-value=4.4e-38  Score=266.88  Aligned_cols=220  Identities=17%  Similarity=0.146  Sum_probs=162.2

Q ss_pred             ccccccceecccCceEEEEEEec----CCceEEEEEeecCCCch-----------HHHHHHHHHHHhhcCCCcceeEeeE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ----DGMEVVVKGFNLQYGGA-----------FKNLDVECNMMKIIRHQNLIKIISS   96 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~----~~~~v~vK~~~~~~~~~-----------~~~~~~e~~~l~~~~h~~i~~~~~~   96 (263)
                      .+|...+.||+|+||.||+|...    ++..+|+|++.......           ...+.+|+..++.++|+||++++++
T Consensus        37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~  116 (345)
T 2v62_A           37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS  116 (345)
T ss_dssp             CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred             ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence            45999999999999999999954    57889999997653221           1234567888999999999999999


Q ss_pred             eec----CCeeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-------
Q 039276           97 CSK----DDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-------  165 (263)
Q Consensus        97 ~~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-------  165 (263)
                      +.+    ....+++|||+ +++|.+++.... .+++..++.++.|++.||+|||+++++||||||+||+.+..       
T Consensus       117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kL  194 (345)
T 2v62_A          117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYL  194 (345)
T ss_dssp             EEEESSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTTSEEE
T ss_pred             cccccCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcEEE
Confidence            977    67899999999 889999998765 48999999999999999999999999999999999995422       


Q ss_pred             -------------------------ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHh
Q 039276          166 -------------------------TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWV  208 (263)
Q Consensus       166 -------------------------~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~  208 (263)
                                               ..||+.|+||            |||||||++|||++|+.||..............
T Consensus       195 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~  274 (345)
T 2v62_A          195 ADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAK  274 (345)
T ss_dssp             CCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHH
T ss_pred             EeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHHH
Confidence                                     2478889999            999999999999999999964322222111111


Q ss_pred             hhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          209 NDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ...... ........         .....+++++.+++.+||+.||++|||+++|
T Consensus       275 ~~~~~~-~~~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l  319 (345)
T 2v62_A          275 TNLLDE-LPQSVLKW---------APSGSSCCEIAQFLVCAHSLAYDEKPNYQAL  319 (345)
T ss_dssp             HHHHHT-TTHHHHHH---------SCTTSCCHHHHHHHHHHHTCCTTCCCCHHHH
T ss_pred             Hhhccc-ccHHHHhh---------ccccccHHHHHHHHHHHhhcCcccCCCHHHH
Confidence            100000 00000000         0012456679999999999999999999864

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=100.00  E-value=8.5e-38  Score=266.46  Aligned_cols=227  Identities=17%  Similarity=0.223  Sum_probs=174.5

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      .+|+..+.||+|+||.||++.. .++..||+|++.... ....+.+.+|+.+++.++|+||+++++++.+.+..++||||
T Consensus        33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  112 (360)
T 3eqc_A           33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH  112 (360)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence            4699999999999999999994 468999999998663 33456788999999999999999999999999999999999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccC-CccccccCCCcccccc---------------------ccc
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFG-HSTHLLLKEDQSLTQI---------------------QTL  167 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~h~dlk~~nil~~~---------------------~~~  167 (263)
                      +++++|.+++..... +++..+..++.|++.||+|||++ +++|+||||+||+.+.                     ...
T Consensus       113 ~~~~~L~~~l~~~~~-~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  191 (360)
T 3eqc_A          113 MDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV  191 (360)
T ss_dssp             CTTCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC----C
T ss_pred             CCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccccccCCC
Confidence            999999999987554 88999999999999999999996 9999999999999543                     235


Q ss_pred             ccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhh--------------------------
Q 039276          168 ATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVN--------------------------  209 (263)
Q Consensus       168 g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~--------------------------  209 (263)
                      |++.|+||            |||||||++|+|++|+.||......+  +.....                          
T Consensus       192 gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (360)
T 3eqc_A          192 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE--LELMFGCQVEGDAAETPPRPRTPGRPLNKFGM  269 (360)
T ss_dssp             CCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHH--HHHHHC--------------------------
T ss_pred             CCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHhcccccccCCCCCCCcccCCCccccccc
Confidence            78899999            99999999999999999996432111  100000                          


Q ss_pred             -hcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          210 -DLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       210 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                       ...........+.......  .......+++++.+++.+||+.||++|||++|+
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el  322 (360)
T 3eqc_A          270 DSRPPMAIFELLDYIVNEPP--PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQL  322 (360)
T ss_dssp             ----CCCHHHHHHHHHHSCC--CCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHH
T ss_pred             CCCCcccchhhhhHHhccCC--CCCCcccccHHHHHHHHHHhhcChhhCCCHHHH
Confidence             0000011111111111110  001123457789999999999999999999764

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=100.00  E-value=1.9e-37  Score=256.34  Aligned_cols=214  Identities=20%  Similarity=0.217  Sum_probs=172.6

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecC--CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEe
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQ--YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      .+|+..+.||+|+||.||+|.. .+++.|++|++...  .......+.+|+++++.++|+||+++++++.+.+..++++|
T Consensus        22 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  101 (287)
T 2wei_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE  101 (287)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             hcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEE
Confidence            4699999999999999999995 46899999999765  23456778899999999999999999999999999999999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------  165 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------  165 (263)
                      ++++++|.+++..... +++..++.++.|++.||+|||.++++|+||+|+||+.+..                       
T Consensus       102 ~~~~~~L~~~l~~~~~-~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~~  180 (287)
T 2wei_A          102 LYTGGELFDEIIKRKR-FSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM  180 (287)
T ss_dssp             CCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCSSC
T ss_pred             ccCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCCCcc
Confidence            9999999998876544 8999999999999999999999999999999999996321                       


Q ss_pred             --ccccccccCc-----------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccc
Q 039276          166 --TLATISYMAP-----------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHF  232 (263)
Q Consensus       166 --~~g~~~y~aP-----------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (263)
                        ..|++.|+||           ||||||+++++|++|+.||...... .........                ......
T Consensus       181 ~~~~~~~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-~~~~~~~~~----------------~~~~~~  243 (287)
T 2wei_A          181 KDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEY-DILKRVETG----------------KYAFDL  243 (287)
T ss_dssp             SCHHHHHTTCCHHHHTTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHC----------------CCCCCS
T ss_pred             ccccCcccccChHHhcCCCCCchhhHhHHHHHHHHHhCCCCCCCCCHH-HHHHHHHcC----------------CCCCCc
Confidence              1356779999           9999999999999999998642111 011111010                000011


Q ss_pred             cchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          233 MTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       233 ~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +....+++++.+++.+||+.||++|||+.|+
T Consensus       244 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~el  274 (287)
T 2wei_A          244 PQWRTISDDAKDLIRKMLTFHPSLRITATQC  274 (287)
T ss_dssp             GGGTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             hhhhhcCHHHHHHHHHHcccChhhCcCHHHH
Confidence            1224566779999999999999999999764

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=2.7e-37  Score=271.64  Aligned_cols=228  Identities=19%  Similarity=0.167  Sum_probs=167.2

Q ss_pred             cccccccceecccCceEEEEEE-ecCCceEEEEEeecC--CCchHHHHHHHHHHHhhcCCCcceeEeeEeecC------C
Q 039276           31 LFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQ--YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKD------D  101 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~------~  101 (263)
                      ..+|+..+.||+|+||.||+|. ..+++.||||++...  .....+.+.+|+.+++.++|+||+++++++...      .
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  140 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ  140 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence            4679999999999999999998 456899999999764  334566788999999999999999999999654      3


Q ss_pred             eeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc----------------
Q 039276          102 FKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ----------------  165 (263)
Q Consensus       102 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~----------------  165 (263)
                      ..|+||||+.+ ++.+.+..   .+++..+..++.|++.||+|||+++++||||||+||+++..                
T Consensus       141 ~~~lv~E~~~~-~l~~~~~~---~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~  216 (464)
T 3ttj_A          141 DVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT  216 (464)
T ss_dssp             EEEEEEECCSE-EHHHHHTS---CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC-----
T ss_pred             eEEEEEeCCCC-CHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCC
Confidence            56999999976 67666643   27889999999999999999999999999999999995432                


Q ss_pred             ------ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCC----------chh
Q 039276          166 ------TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPN----------SVM  217 (263)
Q Consensus       166 ------~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~----------~~~  217 (263)
                            ..||+.|+||            |||||||+++||++|+.||..... ...+..........          ...
T Consensus       217 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~-~~~~~~i~~~lg~p~~~~~~~~~~~~~  295 (464)
T 3ttj_A          217 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY-IDQWNKVIEQLGTPCPEFMKKLQPTVR  295 (464)
T ss_dssp             CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCSCCHHHHTTSCHHHH
T ss_pred             CcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHhcCCCCHHHHHHcchhhh
Confidence                  3678999999            999999999999999999964311 11111111111110          000


Q ss_pred             hhhhhc----------cccc--ccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          218 KVVSAN----------LLSR--EDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       218 ~~~~~~----------~~~~--~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ......          ..+.  .+.........++++.+|+.+||+.||++|||++|+
T Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~  353 (464)
T 3ttj_A          296 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA  353 (464)
T ss_dssp             HHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred             hHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHH
Confidence            000000          0000  000001122347789999999999999999999864

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=100.00  E-value=3.6e-37  Score=257.30  Aligned_cols=216  Identities=20%  Similarity=0.294  Sum_probs=168.7

Q ss_pred             cccccccceecccCceEEEEEE-ecCCceEEEEEeecCC---CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEE
Q 039276           31 LFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALI  106 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv  106 (263)
                      ..+|+..+.||+|+||.||+|. ..+++.||+|++....   ......+.+|+.+++.++|+||+++++++.+.+..+++
T Consensus        31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv  110 (310)
T 2wqm_A           31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV  110 (310)
T ss_dssp             GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence            4569999999999999999999 4578999999997642   23456788999999999999999999999999999999


Q ss_pred             EeccCCCCHhhhhhh---CCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc------------------
Q 039276          107 LECMPHGSLGKCLST---SNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ------------------  165 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~------------------  165 (263)
                      ||++++++|.+++..   ....+++..++.++.|++.||+|||+++++|+||+|+||+.+..                  
T Consensus       111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~  190 (310)
T 2wqm_A          111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT  190 (310)
T ss_dssp             EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC----------
T ss_pred             EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCC
Confidence            999999999999864   23448899999999999999999999999999999999995432                  


Q ss_pred             -----ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccc
Q 039276          166 -----TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSRE  228 (263)
Q Consensus       166 -----~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (263)
                           ..|++.|+||            ||||||+++++|++|+.||.........+......           ...    
T Consensus       191 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-----------~~~----  255 (310)
T 2wqm_A          191 TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQ-----------CDY----  255 (310)
T ss_dssp             --------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHT-----------TCS----
T ss_pred             ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhc-----------ccC----
Confidence                 2467889999            99999999999999999986432111111111100           000    


Q ss_pred             cccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          229 DEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       229 ~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                        .......+++++.+++.+||..||++|||+++|
T Consensus       256 --~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~i  288 (310)
T 2wqm_A          256 --PPLPSDHYSEELRQLVNMCINPDPEKRPDVTYV  288 (310)
T ss_dssp             --CCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             --CCCcccccCHHHHHHHHHHcCCChhhCCCHHHH
Confidence              001123456679999999999999999999764

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=100.00  E-value=1.4e-37  Score=257.64  Aligned_cols=210  Identities=20%  Similarity=0.304  Sum_probs=166.3

Q ss_pred             ccccccc-eecccCceEEEEEEe---cCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEE
Q 039276           32 FLFSESN-LISRGGFGSIYKAKI---QDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKAL  105 (263)
Q Consensus        32 ~~y~~~~-~lg~g~~g~v~~~~~---~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l  105 (263)
                      .+|...+ .||+|+||.||+|..   .+++.||+|++....  ....+.+.+|+++++.++||||+++++++ ..+..++
T Consensus        16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~l   94 (291)
T 1xbb_A           16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWML   94 (291)
T ss_dssp             GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEE
T ss_pred             hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEE
Confidence            4588887 999999999999953   346889999997653  23367788999999999999999999998 5567899


Q ss_pred             EEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc--------------------
Q 039276          106 ILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ--------------------  165 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~--------------------  165 (263)
                      +||++++++|.+++..... +++..++.++.|++.||+|||+++++|+||||+||+....                    
T Consensus        95 v~e~~~~~~L~~~l~~~~~-~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  173 (291)
T 1xbb_A           95 VMEMAELGPLNKYLQQNRH-VKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY  173 (291)
T ss_dssp             EEECCTTEEHHHHHHHCTT-CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSE
T ss_pred             EEEeCCCCCHHHHHHhCcC-CCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCc
Confidence            9999999999999987554 8999999999999999999999999999999999995322                    


Q ss_pred             ------ccccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccc
Q 039276          166 ------TLATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLS  226 (263)
Q Consensus       166 ------~~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (263)
                            ..+++.|+||            ||||||+++|+|++ |+.||.....  ........            .    
T Consensus       174 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~~~~~------------~----  235 (291)
T 1xbb_A          174 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG--SEVTAMLE------------K----  235 (291)
T ss_dssp             EEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCH--HHHHHHHH------------T----
T ss_pred             ccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCH--HHHHHHHH------------c----
Confidence                  1235779999            99999999999999 9999864211  11111110            0    


Q ss_pred             cccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          227 REDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       227 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                        ..+...+..+++++.+++.+||+.||++|||+.+|
T Consensus       236 --~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l  270 (291)
T 1xbb_A          236 --GERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAV  270 (291)
T ss_dssp             --TCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred             --CCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence              00112234567789999999999999999999764

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=1.5e-37  Score=256.09  Aligned_cols=211  Identities=20%  Similarity=0.338  Sum_probs=168.6

Q ss_pred             ccccccceecccCceEEEEEEecC----CceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQD----GMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALI  106 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~----~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv  106 (263)
                      .+|...+.||+|+||.||+|....    +..||+|.+.... ....+.+.+|+.+++.++||||+++++++.+. ..+++
T Consensus        12 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~v   90 (281)
T 3cc6_A           12 EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTWII   90 (281)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCEEE
T ss_pred             cceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCEEE
Confidence            459999999999999999998432    3459999987653 33567788999999999999999999998654 56899


Q ss_pred             EeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc---------------------
Q 039276          107 LECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ---------------------  165 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~---------------------  165 (263)
                      ||++++++|.+++......+++..++.++.|++.||+|||+++++|+||||+||+.+..                     
T Consensus        91 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  170 (281)
T 3cc6_A           91 MELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYK  170 (281)
T ss_dssp             EECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC-------
T ss_pred             EecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCcccccccccc
Confidence            99999999999998766568999999999999999999999999999999999995432                     


Q ss_pred             ---ccccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccc
Q 039276          166 ---TLATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSRED  229 (263)
Q Consensus       166 ---~~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (263)
                         ..+++.|+||            |||||||++|+|++ |+.||......+  ......            ..      
T Consensus       171 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~--~~~~~~------------~~------  230 (281)
T 3cc6_A          171 ASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD--VIGVLE------------KG------  230 (281)
T ss_dssp             --CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG--HHHHHH------------HT------
T ss_pred             cccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH--HHHHHh------------cC------
Confidence               2346679999            99999999999998 999986422111  111110            00      


Q ss_pred             ccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          230 EHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       230 ~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ...+.+..+++.+.+++.+||..||++|||+.||
T Consensus       231 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~el  264 (281)
T 3cc6_A          231 DRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTEL  264 (281)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHHccCCchhCcCHHHH
Confidence            0112234566779999999999999999999764

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=100.00  E-value=1.8e-37  Score=261.64  Aligned_cols=213  Identities=19%  Similarity=0.301  Sum_probs=169.2

Q ss_pred             ccccccceecccCceEEEEEEec-CC-----ceEEEEEeecCCC-chHHHHHHHHHHHhhc-CCCcceeEeeEeecCCee
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ-DG-----MEVVVKGFNLQYG-GAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFK  103 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~-~~-----~~v~vK~~~~~~~-~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~  103 (263)
                      ..|...+.||+|+||.||+|... .+     ..|++|.+..... ...+.+.+|+.+++.+ +||||+++++++.+.+..
T Consensus        46 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~  125 (333)
T 2i1m_A           46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPV  125 (333)
T ss_dssp             TSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCce
Confidence            45999999999999999999853 22     4799999976532 3456788999999999 899999999999999999


Q ss_pred             EEEEeccCCCCHhhhhhhCC-------------CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----
Q 039276          104 ALILECMPHGSLGKCLSTSN-------------YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----  165 (263)
Q Consensus       104 ~lv~e~~~~~~L~~~l~~~~-------------~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----  165 (263)
                      +++|||+++++|.+++....             ..+++..++.++.|++.||+|||+++++|+||||+||+.+..     
T Consensus       126 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl  205 (333)
T 2i1m_A          126 LVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKI  205 (333)
T ss_dssp             EEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGGGEEEB
T ss_pred             EEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCCCeEEE
Confidence            99999999999999987532             236888999999999999999999999999999999995432     


Q ss_pred             --------------------ccccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcC
Q 039276          166 --------------------TLATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLL  212 (263)
Q Consensus       166 --------------------~~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~  212 (263)
                                          ..+++.|+||            |||||||++|||++ |..||........ +...     
T Consensus       206 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~-~~~~-----  279 (333)
T 2i1m_A          206 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK-FYKL-----  279 (333)
T ss_dssp             CCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHH-HHHH-----
T ss_pred             CccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHH-HHHH-----
Confidence                                1245679999            99999999999998 9999864322211 1111     


Q ss_pred             CCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          213 PNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                             .....      ....+..+++++.+++.+||+.||.+|||+.||
T Consensus       280 -------~~~~~------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l  317 (333)
T 2i1m_A          280 -------VKDGY------QMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI  317 (333)
T ss_dssp             -------HHHTC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             -------HhcCC------CCCCCCCCCHHHHHHHHHHhccChhhCcCHHHH
Confidence                   11110      011233446679999999999999999999864

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=100.00  E-value=1.7e-37  Score=258.43  Aligned_cols=211  Identities=22%  Similarity=0.292  Sum_probs=172.2

Q ss_pred             cccccccceecccCceEEEEEE-ecCCceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEe
Q 039276           31 LFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      ...|+..+.||+|+||.||+|. ..+++.||+|.+.... ....+.+.+|+.+++.++|+||+++++++.+....+++||
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  100 (303)
T 3a7i_A           21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME  100 (303)
T ss_dssp             GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence            3569999999999999999998 4568999999998663 3456778899999999999999999999999999999999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------  165 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------  165 (263)
                      |+++++|.+++...  .+++..+..++.|++.||+|||.++++|+||+|+||+.+..                       
T Consensus       101 ~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  178 (303)
T 3a7i_A          101 YLGGGSALDLLEPG--PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT  178 (303)
T ss_dssp             CCTTEEHHHHHTTS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBCC
T ss_pred             eCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecCccccccCc
Confidence            99999999998753  38899999999999999999999999999999999995321                       


Q ss_pred             ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccccc
Q 039276          166 TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFM  233 (263)
Q Consensus       166 ~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (263)
                      ..|++.|+||            ||||||+++++|++|+.||......  .......            ..      ....
T Consensus       179 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~------------~~------~~~~  238 (303)
T 3a7i_A          179 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM--KVLFLIP------------KN------NPPT  238 (303)
T ss_dssp             CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHH------------HS------CCCC
T ss_pred             cCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH--HHHHHhh------------cC------CCCC
Confidence            2468889999            9999999999999999998642111  0000000            00      0011


Q ss_pred             chHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          234 TKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       234 ~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .+..+++.+.+++.+||+.||++|||+++|
T Consensus       239 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~l  268 (303)
T 3a7i_A          239 LEGNYSKPLKEFVEACLNKEPSFRPTAKEL  268 (303)
T ss_dssp             CCSSCCHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred             CccccCHHHHHHHHHHcCCChhhCcCHHHH
Confidence            233456679999999999999999999764

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=100.00  E-value=7.5e-38  Score=257.49  Aligned_cols=213  Identities=17%  Similarity=0.202  Sum_probs=169.9

Q ss_pred             cccccccceecccCceEEEEEEe-cCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEee--cCCeeEE
Q 039276           31 LFLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCS--KDDFKAL  105 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~--~~~~~~l  105 (263)
                      .++|+..+.||+|+||.||++.. .+++.|++|.+....  ....+.+.+|+.+++.++|+||+++++++.  .....++
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   84 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   84 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence            35699999999999999999995 468999999998653  234567889999999999999999999874  4578999


Q ss_pred             EEeccCCCCHhhhhhhCC---CcccHHHHHHHHHHHHHHHHHhccCC-----ccccccCCCccccccc------------
Q 039276          106 ILECMPHGSLGKCLSTSN---YILDFFQRLHIMIDVASAVEYLHFGH-----STHLLLKEDQSLTQIQ------------  165 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~-----i~h~dlk~~nil~~~~------------  165 (263)
                      +|||+++++|.+++....   ..+++..++.++.|++.||+|||.++     ++|+||+|+||+.+..            
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~  164 (279)
T 2w5a_A           85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR  164 (279)
T ss_dssp             EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred             EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence            999999999999997532   23889999999999999999999999     9999999999995432            


Q ss_pred             -----------ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhh
Q 039276          166 -----------TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSA  222 (263)
Q Consensus       166 -----------~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (263)
                                 ..|+..|+||            ||||||+++|+|++|+.||.....  ..+...+.           ..
T Consensus       165 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~i~-----------~~  231 (279)
T 2w5a_A          165 ILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ--KELAGKIR-----------EG  231 (279)
T ss_dssp             HC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHH-----------HT
T ss_pred             eeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH--HHHHHHHh-----------hc
Confidence                       2468889999            999999999999999999864311  11111100           00


Q ss_pred             cccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          223 NLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .       ....+..+++++.+++.+||+.||++|||++||
T Consensus       232 ~-------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l  265 (279)
T 2w5a_A          232 K-------FRRIPYRYSDELNEIITRMLNLKDYHRPSVEEI  265 (279)
T ss_dssp             C-------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             c-------cccCCcccCHHHHHHHHHHcCCCcccCCCHHHH
Confidence            0       001233556779999999999999999999864

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=100.00  E-value=1.4e-37  Score=260.99  Aligned_cols=213  Identities=18%  Similarity=0.316  Sum_probs=169.7

Q ss_pred             cccccccceecccCceEEEEEEec------CCceEEEEEeecCCC-chHHHHHHHHHHHhhcCCCcceeEeeEeecCCee
Q 039276           31 LFLFSESNLISRGGFGSIYKAKIQ------DGMEVVVKGFNLQYG-GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFK  103 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~~------~~~~v~vK~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~  103 (263)
                      ..+|...+.||+|+||.||+|...      +++.||+|.+..... .....+.+|+.+++.++|+||+++++++.+.+..
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~  103 (322)
T 1p4o_A           24 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT  103 (322)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSC
T ss_pred             hhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCcc
Confidence            356999999999999999999843      367899999976532 3455688999999999999999999999998899


Q ss_pred             EEEEeccCCCCHhhhhhhCC---------CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc---------
Q 039276          104 ALILECMPHGSLGKCLSTSN---------YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ---------  165 (263)
Q Consensus       104 ~lv~e~~~~~~L~~~l~~~~---------~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~---------  165 (263)
                      +++||++++++|.+++....         ..+++..++.++.|++.||+|||+++++||||||+||+.+..         
T Consensus       104 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~~kl~Dfg  183 (322)
T 1p4o_A          104 LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFG  183 (322)
T ss_dssp             EEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTT
T ss_pred             EEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCCeEEECcCc
Confidence            99999999999999987532         236888999999999999999999999999999999995432         


Q ss_pred             ----------------ccccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCch
Q 039276          166 ----------------TLATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSV  216 (263)
Q Consensus       166 ----------------~~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~  216 (263)
                                      ..+++.|+||            |||||||++|+|++ |+.||.....  .......        
T Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~~~~~~~--------  253 (322)
T 1p4o_A          184 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--EQVLRFV--------  253 (322)
T ss_dssp             CCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH--HHHHHHH--------
T ss_pred             cccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH--HHHHHHH--------
Confidence                            1346779999            99999999999999 8999864211  1110000        


Q ss_pred             hhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          217 MKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                         ...       .....+..+++++.+++.+||+.||++|||+.||
T Consensus       254 ---~~~-------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~  290 (322)
T 1p4o_A          254 ---MEG-------GLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEI  290 (322)
T ss_dssp             ---HTT-------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             ---HcC-------CcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHH
Confidence               000       0011234566779999999999999999999764

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=100.00  E-value=1.7e-37  Score=256.65  Aligned_cols=213  Identities=18%  Similarity=0.176  Sum_probs=164.1

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCCCc-h-HHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEe
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGG-A-FKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~-~-~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      ++|+..+.||+|+||.||++.. .+++.||+|++...... . ...+.++...++.++||||+++++++.+.+..+++||
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e   86 (290)
T 3fme_A            7 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICME   86 (290)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEE
T ss_pred             HhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEe
Confidence            4599999999999999999994 56899999999765322 2 2333445556788899999999999999999999999


Q ss_pred             ccCCCCHhhhhhh---CCCcccHHHHHHHHHHHHHHHHHhccC-CccccccCCCccccccc-------------------
Q 039276          109 CMPHGSLGKCLST---SNYILDFFQRLHIMIDVASAVEYLHFG-HSTHLLLKEDQSLTQIQ-------------------  165 (263)
Q Consensus       109 ~~~~~~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~h~dlk~~nil~~~~-------------------  165 (263)
                      |+++ +|.+++..   ....+++..++.++.|++.||+|||++ +++|+||||+||+.+..                   
T Consensus        87 ~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  165 (290)
T 3fme_A           87 LMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVA  165 (290)
T ss_dssp             CCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC-----------
T ss_pred             hhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCccccccccc
Confidence            9975 88777654   344489999999999999999999998 99999999999995431                   


Q ss_pred             ---ccccccccCc----------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccc
Q 039276          166 ---TLATISYMAP----------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLS  226 (263)
Q Consensus       166 ---~~g~~~y~aP----------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (263)
                         ..|++.|+||                |||||||++++|++|+.||.........+.........             
T Consensus       166 ~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-------------  232 (290)
T 3fme_A          166 KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSP-------------  232 (290)
T ss_dssp             ----CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCC-------------
T ss_pred             ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCC-------------
Confidence               2578889998                99999999999999999986432221112111111000             


Q ss_pred             cccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          227 REDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       227 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                           ......+++++.+++.+||+.||++|||+.|+
T Consensus       233 -----~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~  264 (290)
T 3fme_A          233 -----QLPADKFSAEFVDFTSQCLKKNSKERPTYPEL  264 (290)
T ss_dssp             -----CCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             -----CcccccCCHHHHHHHHHHhhcChhhCcCHHHH
Confidence                 01123456679999999999999999999764

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=100.00  E-value=1.1e-37  Score=278.83  Aligned_cols=211  Identities=20%  Similarity=0.305  Sum_probs=171.6

Q ss_pred             cccccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           31 LFLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      ..+|+..+.||+|+||.||+|.+..+..||||++.... ...+.+.+|+++++.++|+||+++++++.+ +..++||||+
T Consensus       266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~  343 (535)
T 2h8h_A          266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM  343 (535)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred             hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehh
Confidence            35689999999999999999998877889999998654 345678999999999999999999999876 5689999999


Q ss_pred             CCCCHhhhhhhC-CCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc-----------------------
Q 039276          111 PHGSLGKCLSTS-NYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT-----------------------  166 (263)
Q Consensus       111 ~~~~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~-----------------------  166 (263)
                      ++|+|.+++... ...+++..++.++.|++.||+|||.++++||||||+||+++...                       
T Consensus       344 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~  423 (535)
T 2h8h_A          344 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG  423 (535)
T ss_dssp             TTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCS
T ss_pred             cCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccC
Confidence            999999999753 23388999999999999999999999999999999999954321                       


Q ss_pred             -cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccc
Q 039276          167 -LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHF  232 (263)
Q Consensus       167 -~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (263)
                       .++..|+||            |||||||++|||++ |+.||......     +         ....+..      ..+.
T Consensus       424 ~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~-----~---------~~~~i~~------~~~~  483 (535)
T 2h8h_A          424 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-----E---------VLDQVER------GYRM  483 (535)
T ss_dssp             TTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH-----H---------HHHHHHT------TCCC
T ss_pred             CcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-----H---------HHHHHHc------CCCC
Confidence             245679999            99999999999999 99998642111     0         0011100      1122


Q ss_pred             cchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          233 MTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       233 ~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +.+..+++++.+++.+||+.||++|||+++|
T Consensus       484 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l  514 (535)
T 2h8h_A          484 PCPPECPESLHDLMCQCWRKEPEERPTFEYL  514 (535)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             CCCCCCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence            3345677889999999999999999999764

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=1.8e-37  Score=277.18  Aligned_cols=212  Identities=17%  Similarity=0.207  Sum_probs=171.2

Q ss_pred             cccccccceecccCceEEEEEEe-cCCceEEEEEeecC---CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEE
Q 039276           31 LFLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQ---YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALI  106 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv  106 (263)
                      ..+|+..+.||+|+||.||+|.. .+++.||+|++...   .......+.+|+++++.++|+||+++++++.+.+..|+|
T Consensus       183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV  262 (576)
T 2acx_A          183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV  262 (576)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence            35699999999999999999994 56999999999754   223456678899999999999999999999999999999


Q ss_pred             EeccCCCCHhhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc---------------------
Q 039276          107 LECMPHGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI---------------------  164 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~---------------------  164 (263)
                      |||+++|+|.+++...+ ..+++..+..++.||+.||+|||+++|+||||||+||+++.                     
T Consensus       263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~~  342 (576)
T 2acx_A          263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTI  342 (576)
T ss_dssp             ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCE
T ss_pred             EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccceecccCccc
Confidence            99999999999987643 23899999999999999999999999999999999999532                     


Q ss_pred             -cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccc
Q 039276          165 -QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEH  231 (263)
Q Consensus       165 -~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (263)
                       ...||+.|+||            |||||||++|||++|+.||........ ....         ...+...       .
T Consensus       343 ~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~-~~~i---------~~~i~~~-------~  405 (576)
T 2acx_A          343 KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK-REEV---------ERLVKEV-------P  405 (576)
T ss_dssp             ECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCC-HHHH---------HHHHHHC-------C
T ss_pred             cccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchh-HHHH---------HHHhhcc-------c
Confidence             23679999999            999999999999999999975322111 0000         0000000       0


Q ss_pred             ccchHHHHHHHHHhhccccccCcCCCCC
Q 039276          232 FMTKEQCMSFVFNLAMECTVESPNQRIN  259 (263)
Q Consensus       232 ~~~~~~~~~~l~~l~~~cl~~~p~~Rpt  259 (263)
                      ...+..+++++.+++.+||+.||++||+
T Consensus       406 ~~~p~~~s~~~~dLI~~lL~~dP~~R~g  433 (576)
T 2acx_A          406 EEYSERFSPQARSLCSQLLCKDPAERLG  433 (576)
T ss_dssp             CCCCTTSCHHHHHHHHHHTCSSGGGSTT
T ss_pred             ccCCccCCHHHHHHHHHhccCCHHHcCC
Confidence            0123456678999999999999999994

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=4.6e-37  Score=273.59  Aligned_cols=214  Identities=15%  Similarity=0.220  Sum_probs=172.7

Q ss_pred             cccccccceecccCceEEEEEEe-cCCceEEEEEeecCC---CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEE
Q 039276           31 LFLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALI  106 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv  106 (263)
                      ..+|...+.||+|+||.||++.. .+++.||+|++....   ......+..|+.+++.++||||+++++++.+....|+|
T Consensus       184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV  263 (543)
T 3c4z_A          184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV  263 (543)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence            35699999999999999999995 569999999997542   23456778899999999999999999999999999999


Q ss_pred             EeccCCCCHhhhhhhCC---CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-------------------
Q 039276          107 LECMPHGSLGKCLSTSN---YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-------------------  164 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-------------------  164 (263)
                      |||+++|+|.+++....   ..+++..+..++.|++.||+|||+++++||||||+||+++.                   
T Consensus       264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~  343 (543)
T 3c4z_A          264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ  343 (543)
T ss_dssp             ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred             EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceeeeccCCC
Confidence            99999999999987542   34899999999999999999999999999999999999432                   


Q ss_pred             ----cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccc
Q 039276          165 ----QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSRE  228 (263)
Q Consensus       165 ----~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (263)
                          ...||+.|+||            |||||||++|||++|+.||........ ...+..        .+...      
T Consensus       344 ~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~-~~~~~~--------~i~~~------  408 (543)
T 3c4z_A          344 TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE-NKELKQ--------RVLEQ------  408 (543)
T ss_dssp             CCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCC-HHHHHH--------HHHHC------
T ss_pred             cccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchh-HHHHHH--------HHhhc------
Confidence                12689999999            999999999999999999975321111 111110        00000      


Q ss_pred             cccccchHHHHHHHHHhhccccccCcCCCCCcc
Q 039276          229 DEHFMTKEQCMSFVFNLAMECTVESPNQRINAK  261 (263)
Q Consensus       229 ~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~  261 (263)
                        ....+..+++++.+++.+||+.||++||++.
T Consensus       409 --~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~  439 (543)
T 3c4z_A          409 --AVTYPDKFSPASKDFCEALLQKDPEKRLGFR  439 (543)
T ss_dssp             --CCCCCTTSCHHHHHHHHHHSCSSGGGSCCCB
T ss_pred             --ccCCCcccCHHHHHHHHHhccCCHhHCCCCc
Confidence              0112345677899999999999999999874

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=100.00  E-value=3.8e-37  Score=255.62  Aligned_cols=214  Identities=20%  Similarity=0.238  Sum_probs=171.0

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCCC---------chHHHHHHHHHHHhhcC-CCcceeEeeEeecC
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYG---------GAFKNLDVECNMMKIIR-HQNLIKIISSCSKD  100 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~---------~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~  100 (263)
                      .+|+..+.||+|+||.||+|.. .+++.||+|++.....         ...+.+.+|+++++.+. ||||+++++++.+.
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~   96 (298)
T 1phk_A           17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN   96 (298)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred             hccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccC
Confidence            4599999999999999999995 4689999999976531         22456778999999995 99999999999999


Q ss_pred             CeeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc---------------
Q 039276          101 DFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ---------------  165 (263)
Q Consensus       101 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~---------------  165 (263)
                      +..+++||++++++|.+++..... +++..++.++.|++.||+|||.++++|+||+|+||+.+..               
T Consensus        97 ~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~  175 (298)
T 1phk_A           97 TFFFLVFDLMKKGELFDYLTEKVT-LSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLD  175 (298)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred             CeEEEEEeccCCCcHHHHHhccCC-CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccchhhcC
Confidence            999999999999999999986543 8999999999999999999999999999999999995432               


Q ss_pred             -------ccccccccCc------------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhh
Q 039276          166 -------TLATISYMAP------------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVV  220 (263)
Q Consensus       166 -------~~g~~~y~aP------------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (263)
                             ..|++.|+||                  ||||||+++++|++|+.||..... ..........          
T Consensus       176 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-~~~~~~~~~~----------  244 (298)
T 1phk_A          176 PGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ-MLMLRMIMSG----------  244 (298)
T ss_dssp             TTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHT----------
T ss_pred             CCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccH-HHHHHHHhcC----------
Confidence                   2467889888                  999999999999999999864211 0111111110          


Q ss_pred             hhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          221 SANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                        ..    ....+....+++++.+++.+||+.||++|||+.|+
T Consensus       245 --~~----~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l  281 (298)
T 1phk_A          245 --NY----QFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEA  281 (298)
T ss_dssp             --CC----CCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred             --Cc----ccCcccccccCHHHHHHHHHHccCCcccCCCHHHH
Confidence              00    00011234567779999999999999999998764

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=100.00  E-value=1.9e-37  Score=260.99  Aligned_cols=212  Identities=21%  Similarity=0.372  Sum_probs=167.6

Q ss_pred             ccccccceecccCceEEEEEEe------cCCceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeE
Q 039276           32 FLFSESNLISRGGFGSIYKAKI------QDGMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKA  104 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~------~~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~  104 (263)
                      .+|...+.||+|+||.||+|..      .++..||+|.+.... ......+.+|+.+++.++||||+++++++.+....+
T Consensus        30 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  109 (327)
T 2yfx_A           30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF  109 (327)
T ss_dssp             GGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             hheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcE
Confidence            4699999999999999999983      246789999997542 334567888999999999999999999999988999


Q ss_pred             EEEeccCCCCHhhhhhhCC------CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-------------
Q 039276          105 LILECMPHGSLGKCLSTSN------YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-------------  165 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-------------  165 (263)
                      ++|||+++++|.+++....      ..+++..++.++.|++.||+|||+++++|+||||+||+....             
T Consensus       110 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~  189 (327)
T 2yfx_A          110 ILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM  189 (327)
T ss_dssp             EEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHH
T ss_pred             EEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEECcccc
Confidence            9999999999999998653      237888999999999999999999999999999999996521             


Q ss_pred             ---------------ccccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchh
Q 039276          166 ---------------TLATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVM  217 (263)
Q Consensus       166 ---------------~~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~  217 (263)
                                     ..|++.|+||            |||||||++|+|++ |+.||.....  ........        
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~~~~~~~~--------  259 (327)
T 2yfx_A          190 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVLEFVT--------  259 (327)
T ss_dssp             HHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HHHHHHHH--------
T ss_pred             ccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH--HHHHHHHh--------
Confidence                           1346789999            99999999999998 9999864211  11111110        


Q ss_pred             hhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          218 KVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                          ..      .+...+..+++.+.+++.+||+.||.+|||+.+|
T Consensus       260 ----~~------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l  295 (327)
T 2yfx_A          260 ----SG------GRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII  295 (327)
T ss_dssp             ----TT------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             ----cC------CCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHH
Confidence                00      0111234556779999999999999999999764

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=100.00  E-value=2.9e-37  Score=279.90  Aligned_cols=204  Identities=18%  Similarity=0.317  Sum_probs=165.6

Q ss_pred             eecccCceEEEEEEec---CCceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccCCCC
Q 039276           39 LISRGGFGSIYKAKIQ---DGMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGS  114 (263)
Q Consensus        39 ~lg~g~~g~v~~~~~~---~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~  114 (263)
                      .||+|+||.||+|.+.   ++..||||+++... ....+.+.+|+++++.++|+||+++++++.+ +..++||||+++|+
T Consensus       343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~  421 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP  421 (613)
T ss_dssp             EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred             EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence            7999999999999853   46679999997653 3456789999999999999999999999976 45899999999999


Q ss_pred             HhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc--------------------------cc
Q 039276          115 LGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT--------------------------LA  168 (263)
Q Consensus       115 L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~--------------------------~g  168 (263)
                      |.+++......+++..+..++.|++.||+|||+++++||||||+||+++...                          .+
T Consensus       422 L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~  501 (613)
T 2ozo_A          422 LHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKW  501 (613)
T ss_dssp             HHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--------------
T ss_pred             HHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCCCC
Confidence            9999976665689999999999999999999999999999999999954321                          23


Q ss_pred             cccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccch
Q 039276          169 TISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTK  235 (263)
Q Consensus       169 ~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (263)
                      ++.|+||            |||||||++|||++ |+.||......  .+            ...+..      ..+.+.+
T Consensus       502 ~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--~~------------~~~i~~------~~~~~~p  561 (613)
T 2ozo_A          502 PLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EV------------MAFIEQ------GKRMECP  561 (613)
T ss_dssp             CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH--HH------------HHHHHT------TCCCCCC
T ss_pred             ccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH--HH------------HHHHHc------CCCCCCC
Confidence            4679999            99999999999998 99998643211  11            111111      1122345


Q ss_pred             HHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          236 EQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       236 ~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ..+++++.+++.+||+.||++|||+.+|
T Consensus       562 ~~~~~~l~~li~~cl~~dP~~RPs~~~l  589 (613)
T 2ozo_A          562 PECPPELYALMSDCWIYKWEDRPDFLTV  589 (613)
T ss_dssp             TTCCHHHHHHHHHTTCSSTTTSCCHHHH
T ss_pred             CcCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence            5678889999999999999999999764

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=100.00  E-value=1.7e-37  Score=255.42  Aligned_cols=210  Identities=20%  Similarity=0.326  Sum_probs=169.0

Q ss_pred             ccccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccC
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMP  111 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~  111 (263)
                      .+|+..+.||+|+||.||+|...++..||+|.+.... ...+.+.+|+++++.++|+||+++++++.+ +..+++||+++
T Consensus        13 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~   90 (279)
T 1qpc_A           13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYME   90 (279)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCT
T ss_pred             HhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEecCC
Confidence            5699999999999999999998878899999997653 345778899999999999999999999864 45899999999


Q ss_pred             CCCHhhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc------------------------c
Q 039276          112 HGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ------------------------T  166 (263)
Q Consensus       112 ~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~------------------------~  166 (263)
                      +++|.+++.... ..+++..+..++.|++.||+|||+++++|+||||+||+.+..                        .
T Consensus        91 ~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  170 (279)
T 1qpc_A           91 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA  170 (279)
T ss_dssp             TCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTC
T ss_pred             CCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccCC
Confidence            999999997543 238899999999999999999999999999999999995432                        1


Q ss_pred             cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccccc
Q 039276          167 LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFM  233 (263)
Q Consensus       167 ~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (263)
                      .++..|+||            ||||||++++||++ |+.||...... ........             .      .+..
T Consensus       171 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-~~~~~~~~-------------~------~~~~  230 (279)
T 1qpc_A          171 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP-EVIQNLER-------------G------YRMV  230 (279)
T ss_dssp             CCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-HHHHHHHT-------------T------CCCC
T ss_pred             CCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH-HHHHHHhc-------------c------cCCC
Confidence            345679999            99999999999999 99998642111 00110000             0      0112


Q ss_pred             chHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          234 TKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       234 ~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .+..+++++.+++.+||+.||++|||+++|
T Consensus       231 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~l  260 (279)
T 1qpc_A          231 RPDNCPEELYQLMRLCWKERPEDRPTFDYL  260 (279)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             CcccccHHHHHHHHHHhccChhhCCCHHHH
Confidence            234566779999999999999999998764

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=100.00  E-value=2.5e-37  Score=260.38  Aligned_cols=214  Identities=18%  Similarity=0.214  Sum_probs=169.6

Q ss_pred             ccccc-ceecccCceEEEEEEe-cCCceEEEEEeecCC--CchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCeeEEEE
Q 039276           33 LFSES-NLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY--GGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        33 ~y~~~-~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      +|... +.||+|+||.||+|.. .+++.||+|++....  ......+.+|+.+++.+ .|+||+++++++.+.+..++||
T Consensus        29 ~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~  108 (327)
T 3lm5_A           29 FYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILIL  108 (327)
T ss_dssp             HEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             EEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEE
Confidence            46665 8899999999999984 468999999997652  33467788999999999 5699999999999999999999


Q ss_pred             eccCCCCHhhhhhhC-CCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc----------------------
Q 039276          108 ECMPHGSLGKCLSTS-NYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI----------------------  164 (263)
Q Consensus       108 e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~----------------------  164 (263)
                      ||+++++|.+++... ...+++..++.++.|++.||+|||.++++||||||+||+...                      
T Consensus       109 e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~  188 (327)
T 3lm5_A          109 EYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHAC  188 (327)
T ss_dssp             ECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC----
T ss_pred             EecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCcc
Confidence            999999999998653 234899999999999999999999999999999999999654                      


Q ss_pred             ---cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccc
Q 039276          165 ---QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSRED  229 (263)
Q Consensus       165 ---~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (263)
                         ...|++.|+||            |||||||++|+|++|+.||......+ ........                ...
T Consensus       189 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~----------------~~~  251 (327)
T 3lm5_A          189 ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE-TYLNISQV----------------NVD  251 (327)
T ss_dssp             -----CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHT----------------CCC
T ss_pred             ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH-HHHHHHhc----------------ccc
Confidence               12478899999            99999999999999999986421110 01000000                000


Q ss_pred             ccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          230 EHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       230 ~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ........+++.+.+++.+||+.||++|||++|+
T Consensus       252 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~l  285 (327)
T 3lm5_A          252 YSEETFSSVSQLATDFIQSLLVKNPEKRPTAEIC  285 (327)
T ss_dssp             CCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             cCchhhcccCHHHHHHHHHHcCCChhhCcCHHHH
Confidence            1111234566779999999999999999998764

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.6e-37  Score=263.59  Aligned_cols=230  Identities=17%  Similarity=0.182  Sum_probs=167.4

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCCC-----chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYG-----GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKAL  105 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~-----~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l  105 (263)
                      .+|+..+.||+|+||.||+|.. .+++.||+|.+.....     .....+.+|+++++.++|+||+++++++.+.+..++
T Consensus        10 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   89 (346)
T 1ua2_A           10 KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISL   89 (346)
T ss_dssp             ---CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEE
T ss_pred             cccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEE
Confidence            5699999999999999999994 5689999999975422     123467789999999999999999999999999999


Q ss_pred             EEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc--------------------
Q 039276          106 ILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ--------------------  165 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~--------------------  165 (263)
                      +|||+++ +|.+++......+++..+..++.|++.||+|||+++++||||||+||+.+..                    
T Consensus        90 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~  168 (346)
T 1ua2_A           90 VFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRA  168 (346)
T ss_dssp             EEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCC
T ss_pred             EEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEecccceeccCCccc
Confidence            9999986 8999888766568888999999999999999999999999999999995332                    


Q ss_pred             ---ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhh-----cc
Q 039276          166 ---TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSA-----NL  224 (263)
Q Consensus       166 ---~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~  224 (263)
                         ..||+.|+||             |||||||++|||++|..||..... ...+..............+.+.     ..
T Consensus       169 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  247 (346)
T 1ua2_A          169 YTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSD-LDQLTRIFETLGTPTEEQWPDMCSLPDYV  247 (346)
T ss_dssp             CCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCCCCTTTSSSTTSSTTCC
T ss_pred             CCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCH-HHHHHHHHHHcCCCChhhhhhhccCcccc
Confidence               2468889999             999999999999999999864311 1112222211111000000000     00


Q ss_pred             c-cccccc--ccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          225 L-SREDEH--FMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       225 ~-~~~~~~--~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      . ...+..  ......+++++.+++.+||+.||++|||++|+
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el  289 (346)
T 1ua2_A          248 TFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQA  289 (346)
T ss_dssp             CCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHH
T ss_pred             cccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHH
Confidence            0 000000  00113456789999999999999999999764

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=3.2e-38  Score=265.60  Aligned_cols=211  Identities=18%  Similarity=0.298  Sum_probs=164.6

Q ss_pred             ccccccceecccCceEEEEEEe-cCCce----EEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGME----VVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKAL  105 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~----v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l  105 (263)
                      .+|+..+.||+|+||.||+|.. .++..    |++|.+.... ......+.+|+.+++.++|+||+++++++.+ +..++
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~   91 (325)
T 3kex_A           13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPG-SSLQL   91 (325)
T ss_dssp             TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECB-SSEEE
T ss_pred             hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC-CccEE
Confidence            4599999999999999999984 44443    7888775442 2334556789999999999999999998864 56899


Q ss_pred             EEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc--------------------
Q 039276          106 ILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ--------------------  165 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~--------------------  165 (263)
                      ++||+++++|.+++......+++..++.++.|++.||+|||+++++||||||+||+.+..                    
T Consensus        92 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~  171 (325)
T 3kex_A           92 VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQ  171 (325)
T ss_dssp             EEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTC
T ss_pred             EEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCcccccCccccc
Confidence            999999999999998765558889999999999999999999999999999999995321                    


Q ss_pred             -----ccccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccc
Q 039276          166 -----TLATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSR  227 (263)
Q Consensus       166 -----~~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (263)
                           ..|+..|+||            |||||||++|+|++ |+.||......  .....            +...    
T Consensus       172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~------------~~~~----  233 (325)
T 3kex_A          172 LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA--EVPDL------------LEKG----  233 (325)
T ss_dssp             CC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT--HHHHH------------HHTT----
T ss_pred             ccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH--HHHHH------------HHcC----
Confidence                 2356689999            99999999999999 99998743211  11111            1110    


Q ss_pred             ccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          228 EDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       228 ~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                        .+...+..++.++.+++.+||+.||++|||+.+|
T Consensus       234 --~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el  267 (325)
T 3kex_A          234 --ERLAQPQICTIDVYMVMVKCWMIDENIRPTFKEL  267 (325)
T ss_dssp             --CBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHH
T ss_pred             --CCCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHH
Confidence              0111233345568899999999999999999764

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=4.6e-37  Score=255.21  Aligned_cols=212  Identities=19%  Similarity=0.337  Sum_probs=165.4

Q ss_pred             ccccccceecccCceEEEEEEecC----CceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEe-ecCCeeEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQD----GMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSC-SKDDFKAL  105 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~----~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-~~~~~~~l  105 (263)
                      ..|+..+.||+|+||.||+|...+    ...+++|.+.... ....+.+.+|+.+++.++|+||+++++++ ...+..++
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  104 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV  104 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred             eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence            459999999999999999998432    2358899887643 34456788999999999999999999986 45567899


Q ss_pred             EEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc--------------------
Q 039276          106 ILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ--------------------  165 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~--------------------  165 (263)
                      +|||+++++|.+++......+++..++.++.|++.||+|||+++++|+||||+||+.+..                    
T Consensus       105 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~  184 (298)
T 3f66_A          105 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY  184 (298)
T ss_dssp             EEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGC
T ss_pred             EEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECcccccccccccchh
Confidence            999999999999998766668999999999999999999999999999999999995432                    


Q ss_pred             -------ccccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhccc
Q 039276          166 -------TLATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLL  225 (263)
Q Consensus       166 -------~~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (263)
                             ..+++.|+||            |||||||++++|++ +..||...... .........               
T Consensus       185 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~-~~~~~~~~~---------------  248 (298)
T 3f66_A          185 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-DITVYLLQG---------------  248 (298)
T ss_dssp             BC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTT-THHHHHHTT---------------
T ss_pred             ccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHH-HHHHHHhcC---------------
Confidence                   1345679999            99999999999999 55555432111 111111110               


Q ss_pred             ccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          226 SREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       226 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                          .+...+..+++.+.+++.+||+.||++|||++||
T Consensus       249 ----~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~el  282 (298)
T 3f66_A          249 ----RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL  282 (298)
T ss_dssp             ----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             ----CCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence                0111233456679999999999999999999764

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=2.9e-37  Score=257.74  Aligned_cols=230  Identities=19%  Similarity=0.233  Sum_probs=166.7

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCC-----CchHHHHHHHHHHHhhcC---CCcceeEeeEeecCC-
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY-----GGAFKNLDVECNMMKIIR---HQNLIKIISSCSKDD-  101 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~-----~~~~~~~~~e~~~l~~~~---h~~i~~~~~~~~~~~-  101 (263)
                      .+|+..+.||+|+||.||+|. ..+++.||+|++....     ........+|+++++.++   ||||+++++++.+.. 
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~   88 (308)
T 3g33_A            9 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRT   88 (308)
T ss_dssp             -CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCS
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCC
Confidence            469999999999999999999 4568999999997542     122345667887777664   999999999997654 


Q ss_pred             ----eeEEEEeccCCCCHhhhhhhCCCc-ccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc------------
Q 039276          102 ----FKALILECMPHGSLGKCLSTSNYI-LDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI------------  164 (263)
Q Consensus       102 ----~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~------------  164 (263)
                          ..++++|++.+ +|.+++...... +++..++.++.|++.||+|||+++++||||||+||+.+.            
T Consensus        89 ~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a  167 (308)
T 3g33_A           89 DREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLA  167 (308)
T ss_dssp             SSEEEEEEEEECCCC-BHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEECSCSCT
T ss_pred             CCceeEEEEehhhhc-CHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEeeCccc
Confidence                57999999974 999999865432 899999999999999999999999999999999999532            


Q ss_pred             ----------cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhh---
Q 039276          165 ----------QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKV---  219 (263)
Q Consensus       165 ----------~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~---  219 (263)
                                ...||+.|+||            |||||||++|||++|+.||...... ..+..............+   
T Consensus       168 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~  246 (308)
T 3g33_A          168 RIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA-DQLGKIFDLIGLPPEDDWPRD  246 (308)
T ss_dssp             TTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHH-HHHHHHHHHHCCCCTTTSCSS
T ss_pred             cccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCChhhccch
Confidence                      23578899999            9999999999999999998643211 111111111110000000   


Q ss_pred             ---hhhcccccc-cccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          220 ---VSANLLSRE-DEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       220 ---~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                         ......... .........+++++.+++.+||+.||++|||+.|+
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~  294 (308)
T 3g33_A          247 VSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRA  294 (308)
T ss_dssp             CSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred             hhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHH
Confidence               000000000 00000113456779999999999999999999764

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.9e-37  Score=256.20  Aligned_cols=212  Identities=17%  Similarity=0.299  Sum_probs=165.5

Q ss_pred             cccccceecccCceEEEEEEec-CC---ceEEEEEeecCCC-chHHHHHHHHHHHhhcCCCcceeEeeEeecCCe-eEEE
Q 039276           33 LFSESNLISRGGFGSIYKAKIQ-DG---MEVVVKGFNLQYG-GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDF-KALI  106 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~~-~~---~~v~vK~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~-~~lv  106 (263)
                      .|...+.||+|+||.||+|... ++   ..+|+|.+..... ...+.+.+|+.+++.++|+||+++++++.+.+. .+++
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v  101 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL  101 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred             EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence            4777899999999999999843 33   3699999876533 345678899999999999999999999976554 4999


Q ss_pred             EeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc---------------------
Q 039276          107 LECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ---------------------  165 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~---------------------  165 (263)
                      +||+.+++|.+++......+++..++.++.|++.||+|||+++++|+||||+||+.+..                     
T Consensus       102 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~  181 (298)
T 3pls_A          102 LPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYS  181 (298)
T ss_dssp             ECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGC
T ss_pred             EecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcccc
Confidence            99999999999998766668999999999999999999999999999999999995432                     


Q ss_pred             ------ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccc
Q 039276          166 ------TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSR  227 (263)
Q Consensus       166 ------~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (263)
                            ..+++.|+||            |||||||++|+|++|..|+........ ......            ..    
T Consensus       182 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~-~~~~~~------------~~----  244 (298)
T 3pls_A          182 VQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFD-LTHFLA------------QG----  244 (298)
T ss_dssp             SCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGG-HHHHHH------------TT----
T ss_pred             cccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHH-HHHHhh------------cC----
Confidence                  1346779999            999999999999996666432211111 111111            00    


Q ss_pred             ccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          228 EDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       228 ~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                        ...+.+..+++++.+++.+||+.||++|||+++|
T Consensus       245 --~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l  278 (298)
T 3pls_A          245 --RRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVL  278 (298)
T ss_dssp             --CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             --CCCCCCccchHHHHHHHHHHccCChhhCcCHHHH
Confidence              0112234456779999999999999999998764

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=100.00  E-value=2.9e-37  Score=258.30  Aligned_cols=213  Identities=21%  Similarity=0.323  Sum_probs=168.8

Q ss_pred             ccccccceecccCceEEEEEEe------cCCceEEEEEeecCCC-chHHHHHHHHHHHhhc-CCCcceeEeeEeecC-Ce
Q 039276           32 FLFSESNLISRGGFGSIYKAKI------QDGMEVVVKGFNLQYG-GAFKNLDVECNMMKII-RHQNLIKIISSCSKD-DF  102 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~------~~~~~v~vK~~~~~~~-~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~-~~  102 (263)
                      .+|...+.||+|+||.||+|..      .+++.||+|.+..... .....+.+|+.+++.+ +||||+++++++... ..
T Consensus        27 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~  106 (316)
T 2xir_A           27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP  106 (316)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSC
T ss_pred             hheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCc
Confidence            5699999999999999999973      2468899999976533 3456788999999999 789999999998764 45


Q ss_pred             eEEEEeccCCCCHhhhhhhCCCc---------------ccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc--
Q 039276          103 KALILECMPHGSLGKCLSTSNYI---------------LDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ--  165 (263)
Q Consensus       103 ~~lv~e~~~~~~L~~~l~~~~~~---------------~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~--  165 (263)
                      .+++|||+++++|.+++......               +++..++.++.|++.||+|||+++++|+||||+||+.+..  
T Consensus       107 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~  186 (316)
T 2xir_A          107 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV  186 (316)
T ss_dssp             CEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGC
T ss_pred             eEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCC
Confidence            89999999999999999865432               7889999999999999999999999999999999995432  


Q ss_pred             -----------------------ccccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhh
Q 039276          166 -----------------------TLATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVN  209 (263)
Q Consensus       166 -----------------------~~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~  209 (263)
                                             ..|++.|+||            |||||||++|+|++ |+.||...............
T Consensus       187 ~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~  266 (316)
T 2xir_A          187 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE  266 (316)
T ss_dssp             EEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHH
T ss_pred             EEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHhcc
Confidence                                   1346679999            99999999999998 99998653222111111111


Q ss_pred             hcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          210 DLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .                   .....+..+++++.+++.+||+.||.+|||+.||
T Consensus       267 ~-------------------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el  301 (316)
T 2xir_A          267 G-------------------TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL  301 (316)
T ss_dssp             T-------------------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             C-------------------ccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence            0                   0111233456679999999999999999999864

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=6.9e-38  Score=269.72  Aligned_cols=228  Identities=19%  Similarity=0.254  Sum_probs=161.2

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecC--CCchHHHHHHHHHHHhhcC-CCcceeEeeEeecC--CeeEE
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQ--YGGAFKNLDVECNMMKIIR-HQNLIKIISSCSKD--DFKAL  105 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~--~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~--~~~~l  105 (263)
                      .+|+..+.||+|+||.||+|. ..+++.||+|++...  .....+...+|+.+++.+. |+||+++++++...  ...|+
T Consensus         9 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~l   88 (388)
T 3oz6_A            9 RKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYL   88 (388)
T ss_dssp             TTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEE
T ss_pred             CceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEE
Confidence            569999999999999999998 456899999998654  2345667788999999996 99999999999754  36899


Q ss_pred             EEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc--------------------
Q 039276          106 ILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ--------------------  165 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~--------------------  165 (263)
                      ||||++ ++|.+++...  .+++..+..++.|++.||+|||+++++||||||+||+.+..                    
T Consensus        89 v~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~  165 (388)
T 3oz6_A           89 VFDYME-TDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRV  165 (388)
T ss_dssp             EEECCS-EEHHHHHHHT--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCC
T ss_pred             EecccC-cCHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCcccccccccccc
Confidence            999997 4999998764  37888999999999999999999999999999999994321                    


Q ss_pred             ------------------------ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHh
Q 039276          166 ------------------------TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWV  208 (263)
Q Consensus       166 ------------------------~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~  208 (263)
                                              ..||+.|+||             |||||||+++||++|+.||..... ...+....
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~-~~~~~~i~  244 (388)
T 3oz6_A          166 TNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSST-MNQLERII  244 (388)
T ss_dssp             CCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHH
T ss_pred             cccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHH
Confidence                                    2578889999             999999999999999999964311 11122221


Q ss_pred             hhcCCCchh-----------hhhhhcccc----ccccc------------ccchHHHHHHHHHhhccccccCcCCCCCcc
Q 039276          209 NDLLPNSVM-----------KVVSANLLS----REDEH------------FMTKEQCMSFVFNLAMECTVESPNQRINAK  261 (263)
Q Consensus       209 ~~~~~~~~~-----------~~~~~~~~~----~~~~~------------~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~  261 (263)
                      .........           .........    .....            ......+++++.+|+.+||+.||++|||++
T Consensus       245 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~  324 (388)
T 3oz6_A          245 GVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISAN  324 (388)
T ss_dssp             HHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHH
T ss_pred             HhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHH
Confidence            111111000           000000000    00000            001124567899999999999999999997


Q ss_pred             CC
Q 039276          262 EM  263 (263)
Q Consensus       262 ev  263 (263)
                      |+
T Consensus       325 e~  326 (388)
T 3oz6_A          325 DA  326 (388)
T ss_dssp             HH
T ss_pred             HH
Confidence            63

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=3e-37  Score=263.70  Aligned_cols=214  Identities=21%  Similarity=0.270  Sum_probs=170.1

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCCC--------chHHHHHHHHHHHhhc-CCCcceeEeeEeecCC
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYG--------GAFKNLDVECNMMKII-RHQNLIKIISSCSKDD  101 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~--------~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~  101 (263)
                      .+|+..+.||+|+||.||+|.. .+|+.||||++.....        ...+.+.+|+.+++.+ +||||+++++++...+
T Consensus        94 ~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~  173 (365)
T 2y7j_A           94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSS  173 (365)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSS
T ss_pred             hhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCC
Confidence            4588889999999999999995 4699999999976532        1245677899999999 8999999999999999


Q ss_pred             eeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc----------------
Q 039276          102 FKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ----------------  165 (263)
Q Consensus       102 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~----------------  165 (263)
                      ..++||||+++++|.+++..... +++..+..++.|++.||.|||..|++|+||||+||+.+..                
T Consensus       174 ~~~lv~e~~~g~~L~~~l~~~~~-l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~  252 (365)
T 2y7j_A          174 FMFLVFDLMRKGELFDYLTEKVA-LSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEP  252 (365)
T ss_dssp             EEEEEECCCTTCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred             EEEEEEEeCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCcccccCC
Confidence            99999999999999999986544 8999999999999999999999999999999999995332                


Q ss_pred             ------ccccccccCc------------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhh
Q 039276          166 ------TLATISYMAP------------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVS  221 (263)
Q Consensus       166 ------~~g~~~y~aP------------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (263)
                            ..||+.|+||                  |||||||++|+|++|+.||..... ...+.....            
T Consensus       253 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~-~~~~~~i~~------------  319 (365)
T 2y7j_A          253 GEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ-ILMLRMIME------------  319 (365)
T ss_dssp             TCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHH------------
T ss_pred             CcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCH-HHHHHHHHh------------
Confidence                  2578889998                  999999999999999999864210 000111100            


Q ss_pred             hcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          222 ANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ....    ...+....+++++.+++.+||+.||++|||+.|+
T Consensus       320 ~~~~----~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~el  357 (365)
T 2y7j_A          320 GQYQ----FSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQA  357 (365)
T ss_dssp             TCCC----CCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred             CCCC----CCCcccccCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence            0000    0001123456679999999999999999999764

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=100.00  E-value=1.9e-37  Score=264.45  Aligned_cols=230  Identities=16%  Similarity=0.165  Sum_probs=169.4

Q ss_pred             ccccccceecccCceEEEEEEecCCceEEEEEeecCCCc-----------hHHHHHHHHHHHhhcCCCcceeEeeEeec-
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGG-----------AFKNLDVECNMMKIIRHQNLIKIISSCSK-   99 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~-----------~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-   99 (263)
                      .+|...+.||+|+||.||+|...++..||+|++......           ..+.+.+|+++++.++||||+++++++.. 
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  101 (362)
T 3pg1_A           22 SPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHF  101 (362)
T ss_dssp             CSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEEC
T ss_pred             cceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEec
Confidence            459999999999999999999777999999999653211           23678899999999999999999999843 


Q ss_pred             ----CCeeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc----------
Q 039276          100 ----DDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ----------  165 (263)
Q Consensus       100 ----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~----------  165 (263)
                          ....++||||++ ++|.+++......+++..+..++.|++.||+|||+++++|+||||+||+.+..          
T Consensus       102 ~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~  180 (362)
T 3pg1_A          102 EEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNL  180 (362)
T ss_dssp             CTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCTTC
T ss_pred             cCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCCEEEEecCc
Confidence                346899999997 58988887766568999999999999999999999999999999999995432          


Q ss_pred             ------------ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchh---
Q 039276          166 ------------TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVM---  217 (263)
Q Consensus       166 ------------~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~---  217 (263)
                                  ..|++.|+||             |||||||++|+|++|+.||...... ..+.............   
T Consensus       181 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~  259 (362)
T 3pg1_A          181 AREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFY-NQLNKIVEVVGTPKIEDVV  259 (362)
T ss_dssp             ---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCHHHHH
T ss_pred             ccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHcCCCChHHhh
Confidence                        2467889999             9999999999999999998643111 1111111111111110   


Q ss_pred             --------hhhhhccccccc-ccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          218 --------KVVSANLLSRED-EHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       218 --------~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                              ............ ........+++.+.+++.+||+.||++|||+.|+
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el  314 (362)
T 3pg1_A          260 MFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQA  314 (362)
T ss_dssp             HTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             hccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHH
Confidence                    000000000000 0001123456779999999999999999998764

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=2.9e-37  Score=265.97  Aligned_cols=230  Identities=16%  Similarity=0.138  Sum_probs=169.9

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCCCchHHHHHHHHHHHhhcC--------CCcceeEeeEee----
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIR--------HQNLIKIISSCS----   98 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~--------h~~i~~~~~~~~----   98 (263)
                      .+|+..+.||+|+||.||+|. ..+++.||+|++... ......+.+|+++++.++        |+||+++++.+.    
T Consensus        37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~  115 (397)
T 1wak_A           37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV  115 (397)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEET
T ss_pred             CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCC
Confidence            569999999999999999998 456889999999754 234567788999999885        788999999987    


Q ss_pred             cCCeeEEEEeccCCCCHhhhhhhC-CCcccHHHHHHHHHHHHHHHHHhccC-CccccccCCCccccccc-----------
Q 039276           99 KDDFKALILECMPHGSLGKCLSTS-NYILDFFQRLHIMIDVASAVEYLHFG-HSTHLLLKEDQSLTQIQ-----------  165 (263)
Q Consensus        99 ~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~h~dlk~~nil~~~~-----------  165 (263)
                      +....++|||++ ++++.+++... ...+++..++.++.|++.||+|||++ +++||||||+||++...           
T Consensus       116 ~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~~~  194 (397)
T 1wak_A          116 NGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEA  194 (397)
T ss_dssp             TEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHHHH
T ss_pred             CCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhhhh
Confidence            556789999999 45666666543 34589999999999999999999998 99999999999997532           


Q ss_pred             ----------------------------------------------------------ccccccccCc------------
Q 039276          166 ----------------------------------------------------------TLATISYMAP------------  175 (263)
Q Consensus       166 ----------------------------------------------------------~~g~~~y~aP------------  175 (263)
                                                                                ..||+.|+||            
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  274 (397)
T 1wak_A          195 TEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPA  274 (397)
T ss_dssp             C---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCCTHH
T ss_pred             HHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCCCcHH
Confidence                                                                      2468899999            


Q ss_pred             chhhHHHHHHHHHhCCCCCccccCCCc-----hhhhHhhhcCCCchhhhhhhccc----------------------ccc
Q 039276          176 DTYNFGIMIMETFSGKKPTIKFFHGEM-----TLKHWVNDLLPNSVMKVVSANLL----------------------SRE  228 (263)
Q Consensus       176 Dv~SlG~il~ell~g~~Pf~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~  228 (263)
                      |||||||++|||++|+.||......+.     .+..............+......                      ...
T Consensus       275 DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  354 (397)
T 1wak_A          275 DIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVL  354 (397)
T ss_dssp             HHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHH
T ss_pred             HHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhh
Confidence            999999999999999999975432221     11111111111000000000000                      000


Q ss_pred             cccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          229 DEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       229 ~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ......+...++++.+|+.+||+.||++|||++|+
T Consensus       355 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~  389 (397)
T 1wak_A          355 VEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAEC  389 (397)
T ss_dssp             HHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHH
T ss_pred             hhhcccchhhHHHHHHHHHHHhccChhhcCCHHHH
Confidence            01112346778889999999999999999999874

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=2.8e-37  Score=262.43  Aligned_cols=231  Identities=19%  Similarity=0.272  Sum_probs=169.2

Q ss_pred             cccccccceecccCceEEEEEEe-cCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeec--------
Q 039276           31 LFLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSK--------   99 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--------   99 (263)
                      ..+|+..+.||+|+||.||+|.. .+++.||+|++....  ......+.+|+.+++.++|+||+++++++.+        
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   95 (351)
T 3mi9_A           16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   95 (351)
T ss_dssp             GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred             ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence            46799999999999999999995 578999999986553  2335567889999999999999999999876        


Q ss_pred             CCeeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc--------------
Q 039276          100 DDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ--------------  165 (263)
Q Consensus       100 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~--------------  165 (263)
                      .+..++||||+++ +|.+.+......+++..++.++.|++.||+|||+++++||||||+||+.+..              
T Consensus        96 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~  174 (351)
T 3mi9_A           96 KGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAF  174 (351)
T ss_dssp             -CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             CceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhcccc
Confidence            3468999999976 8888877665568999999999999999999999999999999999995421              


Q ss_pred             -------------ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhh---hcCCCch
Q 039276          166 -------------TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVN---DLLPNSV  216 (263)
Q Consensus       166 -------------~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~---~~~~~~~  216 (263)
                                   ..||+.|+||             |||||||+++||++|+.||...... ..+.....   ...+...
T Consensus       175 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~  253 (351)
T 3mi9_A          175 SLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ-HQLALISQLCGSITPEVW  253 (351)
T ss_dssp             CCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCTTTS
T ss_pred             cccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCChhhc
Confidence                         2458889999             9999999999999999998743211 11111111   1111100


Q ss_pred             hhhhhhccc----ccccccccch-----HHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          217 MKVVSANLL----SREDEHFMTK-----EQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       217 ~~~~~~~~~----~~~~~~~~~~-----~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .........    ..........     ...++++.+++.+||+.||++|||++|+
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~  309 (351)
T 3mi9_A          254 PNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDA  309 (351)
T ss_dssp             TTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             cccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHH
Confidence            000000000    0000000001     1125668999999999999999999764

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.3e-37  Score=266.48  Aligned_cols=211  Identities=19%  Similarity=0.353  Sum_probs=166.1

Q ss_pred             cccccceecccCceEEEEEEec--CC--ceEEEEEeecC-CCchHHHHHHHHHHHhhcCCCcceeEeeEee-cCCeeEEE
Q 039276           33 LFSESNLISRGGFGSIYKAKIQ--DG--MEVVVKGFNLQ-YGGAFKNLDVECNMMKIIRHQNLIKIISSCS-KDDFKALI  106 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~~--~~--~~v~vK~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-~~~~~~lv  106 (263)
                      .|...+.||+|+||.||+|...  ++  ..||+|.+... .....+.+.+|+.+++.++||||+++++++. ..+..+++
T Consensus        90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv  169 (373)
T 3c1x_A           90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV  169 (373)
T ss_dssp             EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred             eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence            4778899999999999999843  22  45889988654 3345677889999999999999999999865 45678999


Q ss_pred             EeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc---------------------
Q 039276          107 LECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ---------------------  165 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~---------------------  165 (263)
                      |||+++++|.+++......+++..+..++.|++.||+|||+++++||||||+||+.+..                     
T Consensus       170 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~  249 (373)
T 3c1x_A          170 LPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS  249 (373)
T ss_dssp             EECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC-------------
T ss_pred             EECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeecccccccccccccc
Confidence            99999999999998766668899999999999999999999999999999999995432                     


Q ss_pred             ------ccccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccc
Q 039276          166 ------TLATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLS  226 (263)
Q Consensus       166 ------~~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (263)
                            ..+++.|+||            |||||||++|||++ |..||......+. ......                 
T Consensus       250 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~-~~~~~~-----------------  311 (373)
T 3c1x_A          250 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI-TVYLLQ-----------------  311 (373)
T ss_dssp             --------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCH-HHHHHT-----------------
T ss_pred             ccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHH-HHHHHc-----------------
Confidence                  1345679999            99999999999999 6777754322111 111100                 


Q ss_pred             cccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          227 REDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       227 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                        ..+...+..+++++.+++.+||+.||++|||++||
T Consensus       312 --~~~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~el  346 (373)
T 3c1x_A          312 --GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL  346 (373)
T ss_dssp             --TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             --CCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence              01112234566779999999999999999999864

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.1e-37  Score=265.35  Aligned_cols=209  Identities=17%  Similarity=0.196  Sum_probs=168.1

Q ss_pred             ccccccceecccCceEEEEEEe----cCCceEEEEEeecCC----CchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCe
Q 039276           32 FLFSESNLISRGGFGSIYKAKI----QDGMEVVVKGFNLQY----GGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDF  102 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~----~~~~~v~vK~~~~~~----~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~  102 (263)
                      .+|+..+.||+|+||.||++..    .+++.||+|++....    ......+.+|+++++.+ +|+||+++++++.+.+.
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~  133 (355)
T 1vzo_A           54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  133 (355)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence            5799999999999999999986    368999999986532    22345566799999999 69999999999999999


Q ss_pred             eEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------
Q 039276          103 KALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------  165 (263)
Q Consensus       103 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------  165 (263)
                      .++||||+++++|.+++..... +++..+..++.|++.||+|||+++++||||||+||+++..                 
T Consensus       134 ~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~  212 (355)
T 1vzo_A          134 LHLILDYINGGELFTHLSQRER-FTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVAD  212 (355)
T ss_dssp             EEEEECCCCSCBHHHHHHHHSC-CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGG
T ss_pred             EEEEeecCCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCeecccC
Confidence            9999999999999999986554 8999999999999999999999999999999999995321                 


Q ss_pred             -------ccccccccCc--------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcc
Q 039276          166 -------TLATISYMAP--------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANL  224 (263)
Q Consensus       166 -------~~g~~~y~aP--------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (263)
                             ..||+.|+||              |||||||++|||++|+.||........ ...+.            ....
T Consensus       213 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~-~~~~~------------~~~~  279 (355)
T 1vzo_A          213 ETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS-QAEIS------------RRIL  279 (355)
T ss_dssp             GGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC-HHHHH------------HHHH
T ss_pred             CCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch-HHHHH------------HHHh
Confidence                   2578899999              999999999999999999864322111 11111            0000


Q ss_pred             cccccccccchHHHHHHHHHhhccccccCcCCCC
Q 039276          225 LSREDEHFMTKEQCMSFVFNLAMECTVESPNQRI  258 (263)
Q Consensus       225 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rp  258 (263)
                      .    ...+.+..+++.+.+++.+||+.||++||
T Consensus       280 ~----~~~~~~~~~~~~~~~li~~~L~~dP~~R~  309 (355)
T 1vzo_A          280 K----SEPPYPQEMSALAKDLIQRLLMKDPKKRL  309 (355)
T ss_dssp             H----CCCCCCTTSCHHHHHHHHHHTCSSGGGST
T ss_pred             c----cCCCCCcccCHHHHHHHHHHhhhCHHHhc
Confidence            0    01122445667799999999999999999

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=1.3e-36  Score=260.36  Aligned_cols=228  Identities=18%  Similarity=0.161  Sum_probs=166.4

Q ss_pred             cccccccceecccCceEEEEEE-ecCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecCC------
Q 039276           31 LFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDD------  101 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~------  101 (263)
                      ..+|+..+.||+|+||.||+|. ..+++.||+|++....  ....+.+.+|+.+++.++||||+++++++...+      
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~  103 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  103 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred             hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence            4679999999999999999998 4568999999997642  234566788999999999999999999997654      


Q ss_pred             eeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc----------------
Q 039276          102 FKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ----------------  165 (263)
Q Consensus       102 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~----------------  165 (263)
                      ..++||||+.+ +|.+++..   .+++..+..++.|++.||+|||+++++||||||+||+.+..                
T Consensus       104 ~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~  179 (371)
T 2xrw_A          104 DVYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT  179 (371)
T ss_dssp             EEEEEEECCSE-EHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC------
T ss_pred             ceEEEEEcCCC-CHHHHHhh---ccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeeccccccc
Confidence            68999999975 88888853   27889999999999999999999999999999999995432                


Q ss_pred             ------ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCC--ch--------h
Q 039276          166 ------TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPN--SV--------M  217 (263)
Q Consensus       166 ------~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~--~~--------~  217 (263)
                            ..||+.|+||            |||||||++|+|++|+.||...... ..+..........  ..        .
T Consensus       180 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~  258 (371)
T 2xrw_A          180 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI-DQWNKVIEQLGTPCPEFMKKLQPTVR  258 (371)
T ss_dssp             ----------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHC-CCCCCHHHHTTSCHHHH
T ss_pred             ccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHHHhhhHHH
Confidence                  3578889999            9999999999999999999643111 1111111110000  00        0


Q ss_pred             hhhhhcc----------cc--cccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          218 KVVSANL----------LS--REDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       218 ~~~~~~~----------~~--~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .......          .+  ..+.........++++.+|+.+||+.||++|||++|+
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~  316 (371)
T 2xrw_A          259 TYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA  316 (371)
T ss_dssp             HHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             HHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHH
Confidence            0000000          00  0000011123457789999999999999999999864

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=100.00  E-value=1.5e-36  Score=256.78  Aligned_cols=217  Identities=21%  Similarity=0.309  Sum_probs=170.5

Q ss_pred             ccccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhh--cCCCcceeEeeEeecCC----eeEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKI--IRHQNLIKIISSCSKDD----FKAL  105 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~--~~h~~i~~~~~~~~~~~----~~~l  105 (263)
                      .+|...+.||+|+||.||+|... ++.||+|++...   ....+..|++++..  ++|+||+++++++....    ..++
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~l  117 (342)
T 1b6c_B           42 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL  117 (342)
T ss_dssp             HHCEEEEEEEEETTEEEEEEEET-TEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEE
T ss_pred             ccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEE
Confidence            56999999999999999999875 899999998754   34566778888877  78999999999997765    7899


Q ss_pred             EEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhc--------cCCccccccCCCcccccc-------------
Q 039276          106 ILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLH--------FGHSTHLLLKEDQSLTQI-------------  164 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH--------~~~i~h~dlk~~nil~~~-------------  164 (263)
                      +|||+++++|.+++...  .+++..++.++.|++.||+|||        .++++|+||||+||+.+.             
T Consensus       118 v~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~  195 (342)
T 1b6c_B          118 VSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV  195 (342)
T ss_dssp             EECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             EEeecCCCcHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCCce
Confidence            99999999999999764  3889999999999999999999        899999999999999532             


Q ss_pred             --------------cccccccccCc------------------chhhHHHHHHHHHhC----------CCCCccccCCCc
Q 039276          165 --------------QTLATISYMAP------------------DTYNFGIMIMETFSG----------KKPTIKFFHGEM  202 (263)
Q Consensus       165 --------------~~~g~~~y~aP------------------Dv~SlG~il~ell~g----------~~Pf~~~~~~~~  202 (263)
                                    ...|++.|+||                  |||||||++|||++|          ..||......+.
T Consensus       196 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~  275 (342)
T 1b6c_B          196 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP  275 (342)
T ss_dssp             EEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred             eccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcc
Confidence                          12578889998                  999999999999999          677765433333


Q ss_pred             hhhhHhhhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          203 TLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ....+..........        ...+. ......+++.+.+++.+||+.||++|||+.||
T Consensus       276 ~~~~~~~~~~~~~~~--------~~~~~-~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i  327 (342)
T 1b6c_B          276 SVEEMRKVVCEQKLR--------PNIPN-RWQSCEALRVMAKIMRECWYANGAARLTALRI  327 (342)
T ss_dssp             CHHHHHHHHTTSCCC--------CCCCG-GGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred             cHHHHHHHHHHHHhC--------CCCcc-cccchhHHHHHHHHHHHHhccChhhCCCHHHH
Confidence            333332221111110        00000 01134677889999999999999999999864

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=100.00  E-value=7.9e-38  Score=265.98  Aligned_cols=216  Identities=12%  Similarity=0.095  Sum_probs=165.0

Q ss_pred             ccccccceecccCceEEEEEEec---------CCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCccee----------
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ---------DGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIK----------   92 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~---------~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~----------   92 (263)
                      .+|...+.||+|+||.||+|...         +++.||+|.+...     +.+.+|+++++.++|+|+++          
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~  116 (352)
T 2jii_A           42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL  116 (352)
T ss_dssp             CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred             CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence            46999999999999999999854         3789999998755     35678999999999999987          


Q ss_pred             -----EeeEeec-CCeeEEEEeccCCCCHhhhhhhC-CCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc
Q 039276           93 -----IISSCSK-DDFKALILECMPHGSLGKCLSTS-NYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ  165 (263)
Q Consensus        93 -----~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~  165 (263)
                           +++++.. .+..+++|||+ +++|.+++... ...+++..++.++.|++.||+|||+++++||||||+||+.+..
T Consensus       117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~  195 (352)
T 2jii_A          117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPE  195 (352)
T ss_dssp             CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEETT
T ss_pred             cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcCC
Confidence                 5666654 67889999999 89999999875 2348999999999999999999999999999999999995432


Q ss_pred             c--------------------------------cccccccCc------------chhhHHHHHHHHHhCCCCCccccCCC
Q 039276          166 T--------------------------------LATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGE  201 (263)
Q Consensus       166 ~--------------------------------~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~  201 (263)
                      .                                .||+.|+||            |||||||++|||++|+.||.......
T Consensus       196 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~  275 (352)
T 2jii_A          196 DQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNT  275 (352)
T ss_dssp             EEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH
T ss_pred             CCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCH
Confidence            1                                578899999            99999999999999999997643222


Q ss_pred             chhhhHhhhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          202 MTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ..+..........         . ............+++++.+++.+||+.||++|||+++|
T Consensus       276 ~~~~~~~~~~~~~---------~-~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l  327 (352)
T 2jii_A          276 EDIMKQKQKFVDK---------P-GPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAML  327 (352)
T ss_dssp             HHHHHHHHHHHHS---------C-CCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHH
T ss_pred             HHHHHHHHhccCC---------h-hhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHH
Confidence            2222211100000         0 00000000112346679999999999999999999764

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=100.00  E-value=3.8e-37  Score=257.75  Aligned_cols=229  Identities=16%  Similarity=0.167  Sum_probs=165.6

Q ss_pred             cccccccceecccCceEEEEEEec-CCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEee-----------
Q 039276           31 LFLFSESNLISRGGFGSIYKAKIQ-DGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCS-----------   98 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~~-~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----------   98 (263)
                      ..+|...+.||+|+||.||+|... +++.||+|.+........+.+.+|+++++.++||||+++++++.           
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   89 (320)
T 2i6l_A           10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG   89 (320)
T ss_dssp             TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred             CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence            457999999999999999999954 58999999998776666778889999999999999999999873           


Q ss_pred             ---cCCeeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc----------
Q 039276           99 ---KDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ----------  165 (263)
Q Consensus        99 ---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~----------  165 (263)
                         +....+++|||++ ++|.+++...  .+++..++.++.|++.||+|||+++++|+||||+||+.+..          
T Consensus        90 ~~~~~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg  166 (320)
T 2i6l_A           90 SLTELNSVYIVQEYME-TDLANVLEQG--PLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFG  166 (320)
T ss_dssp             -CCSCSEEEEEEECCS-EEHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECCCT
T ss_pred             cccccCceeEEeeccC-CCHHHHhhcC--CccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEccCc
Confidence               3357899999997 5999998653  37889999999999999999999999999999999996421          


Q ss_pred             -----------------ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCc
Q 039276          166 -----------------TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNS  215 (263)
Q Consensus       166 -----------------~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~  215 (263)
                                       ..++..|+||             |||||||++|||++|+.||...... ..............
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~  245 (320)
T 2i6l_A          167 LARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHEL-EQMQLILESIPVVH  245 (320)
T ss_dssp             TCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHSCCCC
T ss_pred             cccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCc
Confidence                             1246779999             9999999999999999998743211 11111111111000


Q ss_pred             h--h-h-------hhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          216 V--M-K-------VVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       216 ~--~-~-------~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .  . .       ...................+++++.+++.+||+.||++|||++|+
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el  303 (320)
T 2i6l_A          246 EEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEA  303 (320)
T ss_dssp             HHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred             hhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHH
Confidence            0  0 0       000000000000001123467789999999999999999999864

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=100.00  E-value=2.2e-37  Score=262.56  Aligned_cols=228  Identities=14%  Similarity=0.170  Sum_probs=173.3

Q ss_pred             ccccccceecccCceEEEEEEecCCceEEEEEeecCCCc---h--------------HHHHHHHHHHHhhcCCCcceeEe
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGG---A--------------FKNLDVECNMMKIIRHQNLIKII   94 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~---~--------------~~~~~~e~~~l~~~~h~~i~~~~   94 (263)
                      .+|...+.||+|+||.||+|.. +++.||+|.+......   .              .+.+.+|+.+++.++|+||++++
T Consensus        31 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~  109 (348)
T 2pml_X           31 NDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCE  109 (348)
T ss_dssp             TTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCS
T ss_pred             CceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEE
Confidence            5699999999999999999998 7999999999754211   1              17888999999999999999999


Q ss_pred             eEeecCCeeEEEEeccCCCCHhhh------hhhC-CCcccHHHHHHHHHHHHHHHHHhcc-CCccccccCCCccccccc-
Q 039276           95 SSCSKDDFKALILECMPHGSLGKC------LSTS-NYILDFFQRLHIMIDVASAVEYLHF-GHSTHLLLKEDQSLTQIQ-  165 (263)
Q Consensus        95 ~~~~~~~~~~lv~e~~~~~~L~~~------l~~~-~~~~~~~~~~~i~~~i~~~l~~lH~-~~i~h~dlk~~nil~~~~-  165 (263)
                      +++.+.+..++||||+++++|.++      +... ...+++..++.++.|++.||+|||+ ++++|+||+|+||+.+.. 
T Consensus       110 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~~~~  189 (348)
T 2pml_X          110 GIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNG  189 (348)
T ss_dssp             EEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEECTTS
T ss_pred             EEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEEcCCC
Confidence            999999999999999999999998      6542 3448999999999999999999999 999999999999995432 


Q ss_pred             --------------------ccccccccCc--------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhc
Q 039276          166 --------------------TLATISYMAP--------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDL  211 (263)
Q Consensus       166 --------------------~~g~~~y~aP--------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~  211 (263)
                                          ..|+..|+||              |||||||+++||++|+.||.................
T Consensus       190 ~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~  269 (348)
T 2pml_X          190 RVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKN  269 (348)
T ss_dssp             CEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCC
T ss_pred             cEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccC
Confidence                                2578889999              999999999999999999975433222222221111


Q ss_pred             CCCch--hhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          212 LPNSV--MKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       212 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .....  ...... ..  ..........+++++.+++.+||+.||++|||++|+
T Consensus       270 ~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~  320 (348)
T 2pml_X          270 IEYPLDRNHFLYP-LT--NKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDA  320 (348)
T ss_dssp             CCCCCSSSSSTTT-TC--C--------CCCHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred             cCCccchhhhhcc-cc--ccccccchhhcCHHHHHHHHHHccCChhhCCCHHHH
Confidence            10000  000000 00  000001124567789999999999999999999764

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=100.00  E-value=2.9e-37  Score=254.07  Aligned_cols=210  Identities=21%  Similarity=0.307  Sum_probs=167.0

Q ss_pred             cccccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecC-CeeEEEEec
Q 039276           31 LFLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKD-DFKALILEC  109 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-~~~~lv~e~  109 (263)
                      ...|+..+.||+|+||.||++... ++.||+|.+....  ..+.+.+|+++++.++|+|++++++++.+. +..++++||
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~   96 (278)
T 1byg_A           20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY   96 (278)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred             hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence            356999999999999999999876 8899999987543  556788999999999999999999987544 578999999


Q ss_pred             cCCCCHhhhhhhCCCc-ccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc--------------------ccc
Q 039276          110 MPHGSLGKCLSTSNYI-LDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ--------------------TLA  168 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~-~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~--------------------~~g  168 (263)
                      +++++|.+++...... +++..++.++.|++.||+|||+++++|+||||+||+.+..                    ..+
T Consensus        97 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~  176 (278)
T 1byg_A           97 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL  176 (278)
T ss_dssp             CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC------------C
T ss_pred             CCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeeccccccccccccCCCc
Confidence            9999999999764332 7888899999999999999999999999999999996432                    245


Q ss_pred             cccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccch
Q 039276          169 TISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTK  235 (263)
Q Consensus       169 ~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (263)
                      +..|+||            ||||||+++++|++ |+.||...... ......             ..      ..+...+
T Consensus       177 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~-~~~~~~-------------~~------~~~~~~~  236 (278)
T 1byg_A          177 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-DVVPRV-------------EK------GYKMDAP  236 (278)
T ss_dssp             CTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG-GHHHHH-------------TT------TCCCCCC
T ss_pred             cccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHH-------------hc------CCCCCCc
Confidence            7789999            99999999999998 99998643111 001000             00      0111223


Q ss_pred             HHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          236 EQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       236 ~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ..+++++.+++.+||+.||++|||+.||
T Consensus       237 ~~~~~~l~~li~~~l~~~p~~Rps~~~l  264 (278)
T 1byg_A          237 DGCPPAVYEVMKNCWHLDAAMRPSFLQL  264 (278)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             ccCCHHHHHHHHHHhcCChhhCCCHHHH
Confidence            4567779999999999999999998764

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=6.6e-37  Score=261.45  Aligned_cols=231  Identities=18%  Similarity=0.140  Sum_probs=171.4

Q ss_pred             cccccccccceecccCceEEEEEE-ecCCceEEEEEeecCCC-chHHHHHHHHHHHhhcCCCcceeEeeEeecC-----C
Q 039276           29 SGLFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYG-GAFKNLDVECNMMKIIRHQNLIKIISSCSKD-----D  101 (263)
Q Consensus        29 ~~~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-----~  101 (263)
                      ....+|+..+.||+|+||.||+|. ..+++.||+|++..... ...+.+.+|+++++.++|+||+++++++...     .
T Consensus        24 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~  103 (364)
T 3qyz_A           24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMK  103 (364)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCC
T ss_pred             cccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccc
Confidence            334579999999999999999998 44688999999975432 3456788999999999999999999998654     3


Q ss_pred             eeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc----------------
Q 039276          102 FKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ----------------  165 (263)
Q Consensus       102 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~----------------  165 (263)
                      ..++++|++.+ +|.+++....  +++..+..++.|++.||+|||+++++||||||+||+.+..                
T Consensus       104 ~~~iv~e~~~~-~L~~~l~~~~--~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~  180 (364)
T 3qyz_A          104 DVYIVQDLMET-DLYKLLKTQH--LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP  180 (364)
T ss_dssp             CEEEEEECCSE-EHHHHHHHCC--CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCG
T ss_pred             eEEEEEcccCc-CHHHHHHhCC--CCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEecCC
Confidence            68999999975 9999987643  8899999999999999999999999999999999994321                


Q ss_pred             ----------ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhh----
Q 039276          166 ----------TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMK----  218 (263)
Q Consensus       166 ----------~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~----  218 (263)
                                ..||+.|+||             |||||||++|+|++|+.||...... ..+..............    
T Consensus       181 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~  259 (364)
T 3qyz_A          181 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL-DQLNHILGILGSPSQEDLNCI  259 (364)
T ss_dssp             GGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGG-GHHHHHHHHHCSCCHHHHHTC
T ss_pred             CCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChH-HHHHHHHHHhCCCCHHHHHHh
Confidence                      2578889999             9999999999999999999643211 11222211111111000    


Q ss_pred             -------hhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          219 -------VVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       219 -------~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                             ...................+++++.+++.+||+.||++|||++|+
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~  311 (364)
T 3qyz_A          260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA  311 (364)
T ss_dssp             CCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred             hhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHH
Confidence                   000000000000000113456779999999999999999999764

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=100.00  E-value=7.1e-37  Score=257.15  Aligned_cols=213  Identities=21%  Similarity=0.273  Sum_probs=169.1

Q ss_pred             cccccccceecccCceEEEEEEe-cCCceEEEEEeecCCCchHHHHHHHHHHHhhc-CCCcceeEeeEeec------CCe
Q 039276           31 LFLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGAFKNLDVECNMMKII-RHQNLIKIISSCSK------DDF  102 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~------~~~  102 (263)
                      ..+|+..+.||+|+||.||+|.. .+++.||+|++.... .....+.+|+.+++.+ +|+||+++++++..      .+.
T Consensus        23 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~  101 (326)
T 2x7f_A           23 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQ  101 (326)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCE
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccce
Confidence            45699999999999999999995 568999999997653 3456788999999998 89999999999976      467


Q ss_pred             eEEEEeccCCCCHhhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc----------------
Q 039276          103 KALILECMPHGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ----------------  165 (263)
Q Consensus       103 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~----------------  165 (263)
                      .+++|||+++++|.+++.... ..+++..++.++.|++.||+|||.++++|+||+|+||+.+..                
T Consensus       102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~  181 (326)
T 2x7f_A          102 LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR  181 (326)
T ss_dssp             EEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCTTTC----
T ss_pred             EEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEeeCcCceecCc
Confidence            899999999999999998643 348899999999999999999999999999999999995422                


Q ss_pred             -------ccccccccCc-----------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhh
Q 039276          166 -------TLATISYMAP-----------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVS  221 (263)
Q Consensus       166 -------~~g~~~y~aP-----------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (263)
                             ..|++.|+||                 |||||||++|+|++|+.||........ ......            
T Consensus       182 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~------------  248 (326)
T 2x7f_A          182 TVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA-LFLIPR------------  248 (326)
T ss_dssp             ---------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHHHHH------------
T ss_pred             CccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHH-HHHhhc------------
Confidence                   2468889998                 999999999999999999864211100 000000            


Q ss_pred             hcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          222 ANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                       .     .........+++.+.+++.+||..||++|||+++|
T Consensus       249 -~-----~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l  284 (326)
T 2x7f_A          249 -N-----PAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQL  284 (326)
T ss_dssp             -S-----CCCCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred             -C-----ccccCCccccCHHHHHHHHHHhccChhhCCCHHHH
Confidence             0     00001123456679999999999999999998764

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=100.00  E-value=1.1e-36  Score=257.16  Aligned_cols=226  Identities=22%  Similarity=0.301  Sum_probs=162.3

Q ss_pred             ccccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHH--HHhhcCCCcceeEeeEeec-----CCeeE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECN--MMKIIRHQNLIKIISSCSK-----DDFKA  104 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~--~l~~~~h~~i~~~~~~~~~-----~~~~~  104 (263)
                      .+|+..+.||+|+||.||+|... ++.||+|++....   ...+..|.+  .+..++|+||+++++.+..     ....+
T Consensus        13 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~   88 (336)
T 3g2f_A           13 DNLKLLELIGRGRYGAVYKGSLD-ERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYL   88 (336)
T ss_dssp             TSEEEEEEEEECSSEEEEEEEET-TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEE
T ss_pred             HHhheeeecccCCCeEEEEEEEC-CeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEE
Confidence            56999999999999999999764 8999999997552   233344444  4555899999999985532     23578


Q ss_pred             EEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccC---------CccccccCCCccccccc----------
Q 039276          105 LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFG---------HSTHLLLKEDQSLTQIQ----------  165 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---------~i~h~dlk~~nil~~~~----------  165 (263)
                      +||||+++|+|.+++....  .++..+..++.|++.||+|||++         +++||||||+||+.+..          
T Consensus        89 lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~  166 (336)
T 3g2f_A           89 LVMEYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGL  166 (336)
T ss_dssp             EEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTT
T ss_pred             EEEecCCCCcHHHHHhhcc--cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeeccc
Confidence            9999999999999997654  58888899999999999999999         99999999999995431          


Q ss_pred             ---------------------ccccccccCc-------------------chhhHHHHHHHHHhCCCCCccccCCCchhh
Q 039276          166 ---------------------TLATISYMAP-------------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLK  205 (263)
Q Consensus       166 ---------------------~~g~~~y~aP-------------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~  205 (263)
                                           ..||+.|+||                   |||||||++|||++|..||...........
T Consensus       167 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~  246 (336)
T 3g2f_A          167 SMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQM  246 (336)
T ss_dssp             CEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCC
T ss_pred             eeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHH
Confidence                                 1478899999                   999999999999999888654322211111


Q ss_pred             hHhhhcCCCchhhhhh-----hcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          206 HWVNDLLPNSVMKVVS-----ANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       206 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .+..............     .......+........+++++.+++.+||+.||++|||++||
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~  309 (336)
T 3g2f_A          247 AFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXA  309 (336)
T ss_dssp             TTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             hhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHH
Confidence            1111111110000000     000111111112234577889999999999999999999864

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=100.00  E-value=1.7e-37  Score=265.80  Aligned_cols=219  Identities=11%  Similarity=0.085  Sum_probs=152.0

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCCC---chHHHHHHHHHHHhhc--CCCcceeEe-------eEee
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYG---GAFKNLDVECNMMKII--RHQNLIKII-------SSCS   98 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~---~~~~~~~~e~~~l~~~--~h~~i~~~~-------~~~~   98 (263)
                      ..|...+.||+|+||.||+|.. .+++.||+|++.....   ...+.+.+|+.+++.+  +|||+++++       +.+.
T Consensus        62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~  141 (371)
T 3q60_A           62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA  141 (371)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred             eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence            3499999999999999999994 5689999999987643   2345566775544444  699988755       3333


Q ss_pred             cC-----------------CeeEEEEeccCCCCHhhhhhhCCCcccHHHH------HHHHHHHHHHHHHhccCCcccccc
Q 039276           99 KD-----------------DFKALILECMPHGSLGKCLSTSNYILDFFQR------LHIMIDVASAVEYLHFGHSTHLLL  155 (263)
Q Consensus        99 ~~-----------------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~------~~i~~~i~~~l~~lH~~~i~h~dl  155 (263)
                      ..                 ...++||||++ ++|.+++...+..+....+      ..++.|++.||+|||+++++||||
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDi  220 (371)
T 3q60_A          142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHF  220 (371)
T ss_dssp             ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTC
T ss_pred             cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcC
Confidence            22                 23799999998 7999999865433455555      678899999999999999999999


Q ss_pred             CCCcccccc--------------------cccccccccCc--------------chhhHHHHHHHHHhCCCCCccccCCC
Q 039276          156 KEDQSLTQI--------------------QTLATISYMAP--------------DTYNFGIMIMETFSGKKPTIKFFHGE  201 (263)
Q Consensus       156 k~~nil~~~--------------------~~~g~~~y~aP--------------Dv~SlG~il~ell~g~~Pf~~~~~~~  201 (263)
                      ||+||+.+.                    ...+++.|+||              |||||||++|||++|+.||.......
T Consensus       221 kp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~  300 (371)
T 3q60_A          221 TPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGI  300 (371)
T ss_dssp             SGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTC
T ss_pred             CHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCccc
Confidence            999999543                    23567899999              99999999999999999997542221


Q ss_pred             chhhhHhhhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          202 MTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ...  +         ... ............+....+++++.+++.+||+.||++|||+.|+
T Consensus       301 ~~~--~---------~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~  350 (371)
T 3q60_A          301 KGS--W---------KRP-SLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEA  350 (371)
T ss_dssp             TTC--C---------CBC-CTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHH
T ss_pred             ccc--h---------hhh-hhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHH
Confidence            100  0         000 0000001111112234667789999999999999999999763

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=1.7e-37  Score=265.26  Aligned_cols=232  Identities=18%  Similarity=0.176  Sum_probs=162.9

Q ss_pred             ccccccccccceecccCceEEEEEE-ecCCceEEEEEeecC--CCchHHHHHHHHHHHhhcCCCcceeEeeEeecC----
Q 039276           28 FSGLFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQ--YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKD----  100 (263)
Q Consensus        28 ~~~~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~----  100 (263)
                      +....+|...+.||+|+||.||+|. ..+++.||+|++...  .....+.+.+|+.+++.++|+||+++++++...    
T Consensus        25 ~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~  104 (367)
T 2fst_X           25 WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE  104 (367)
T ss_dssp             EEEETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGG
T ss_pred             cCCCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccc
Confidence            3445679999999999999999998 456899999999654  223466788999999999999999999998653    


Q ss_pred             --CeeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-------------
Q 039276          101 --DFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-------------  165 (263)
Q Consensus       101 --~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-------------  165 (263)
                        ...++++|++ +++|.+++...  .+++..+..++.|++.||+|||+++++||||||+||+.+.+             
T Consensus       105 ~~~~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~  181 (367)
T 2fst_X          105 EFNDVYLVTHLM-GADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH  181 (367)
T ss_dssp             GCCCCEEEEECC-CEECC-----C--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC------
T ss_pred             cCCeEEEEeccc-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeecccccc
Confidence              5679999999 67999988753  38999999999999999999999999999999999995432             


Q ss_pred             -------ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCC-----------
Q 039276          166 -------TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPN-----------  214 (263)
Q Consensus       166 -------~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~-----------  214 (263)
                             ..||+.|+||             |||||||+++||++|+.||..... ...+..........           
T Consensus       182 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-~~~l~~i~~~~g~p~~~~~~~~~~~  260 (367)
T 2fst_X          182 TADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH-IDQLKLILRLVGTPGAELLKKISSE  260 (367)
T ss_dssp             ---------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHHHCSCCHHHHTTCCCH
T ss_pred             ccccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHHHHHhhhH
Confidence                   3578899999             999999999999999999964321 11111111111111           


Q ss_pred             chhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          215 SVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .......................+++++.+|+.+||+.||++|||+.|+
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~  309 (367)
T 2fst_X          261 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQA  309 (367)
T ss_dssp             HHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             HHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHH
Confidence            0000000000000000000112456779999999999999999998763

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=100.00  E-value=1.4e-36  Score=254.13  Aligned_cols=212  Identities=18%  Similarity=0.270  Sum_probs=168.8

Q ss_pred             ccccccceecccCceEEEEEEecCCceEEEEEeecCC--CchHHHHHHHHHHHhhcC--CCcceeEeeEeecCCeeEEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIR--HQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~--h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      .+|...+.||+|+||.||++...+++.||+|++....  ....+.+.+|+++++.++  |+||+++++++.+.+..+++|
T Consensus        28 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~  107 (313)
T 3cek_A           28 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM  107 (313)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEE
T ss_pred             ceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEE
Confidence            3499999999999999999997779999999997653  234567889999999996  599999999999999999999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-----------------------
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-----------------------  164 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-----------------------  164 (263)
                      | +.+++|.+++..... +++..++.++.|++.||+|||+++++|+||||+||+.+.                       
T Consensus       108 e-~~~~~L~~~l~~~~~-~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~kL~Dfg~~~~~~~~~~~~~~  185 (313)
T 3cek_A          108 E-CGNIDLNSWLKKKKS-IDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVK  185 (313)
T ss_dssp             C-CCSEEHHHHHHHCSS-CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTEEEECCCSSSCC----------
T ss_pred             e-cCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEECCeEEEeeccccccccCccccccc
Confidence            9 567899999987554 889999999999999999999999999999999999432                       


Q ss_pred             -cccccccccCc-----------------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhh
Q 039276          165 -QTLATISYMAP-----------------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVV  220 (263)
Q Consensus       165 -~~~g~~~y~aP-----------------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (263)
                       ...|++.|+||                       |||||||+++||++|+.||.........+.....           
T Consensus       186 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~-----------  254 (313)
T 3cek_A          186 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID-----------  254 (313)
T ss_dssp             ----CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHC-----------
T ss_pred             cCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHh-----------
Confidence             12468889887                       9999999999999999998643221111111111           


Q ss_pred             hhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          221 SANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                       ..      .....+..+++++.+++.+||+.||++|||+.||
T Consensus       255 -~~------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el  290 (313)
T 3cek_A          255 -PN------HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPEL  290 (313)
T ss_dssp             -TT------SCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred             -cc------cccCCcccchHHHHHHHHHHccCCcccCcCHHHH
Confidence             00      0011123335668999999999999999999764

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=9.8e-37  Score=262.11  Aligned_cols=226  Identities=21%  Similarity=0.239  Sum_probs=166.1

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeec-----------
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSK-----------   99 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----------   99 (263)
                      .+|...+.||+|+||.||+|. ..+++.||+|++......    ..+|+++++.++|+||+++++++..           
T Consensus         7 ~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~----~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~   82 (383)
T 3eb0_A            7 KKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY----KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQP   82 (383)
T ss_dssp             TTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS----CCHHHHHHTTCCCTTBCCEEEEEEEC----------
T ss_pred             ceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch----HHHHHHHHHHcCCCCccchhheeeecCccccccccc
Confidence            459999999999999999998 467999999998755322    2369999999999999999999843           


Q ss_pred             ---------------------------CCeeEEEEeccCCCCHhhhhhh---CCCcccHHHHHHHHHHHHHHHHHhccCC
Q 039276          100 ---------------------------DDFKALILECMPHGSLGKCLST---SNYILDFFQRLHIMIDVASAVEYLHFGH  149 (263)
Q Consensus       100 ---------------------------~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~~  149 (263)
                                                 ..+.++||||+++ +|.+.+..   ....+++..++.++.|++.||+|||+++
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g  161 (383)
T 3eb0_A           83 PDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLG  161 (383)
T ss_dssp             ---------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             ccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCc
Confidence                                       3348899999985 87776653   3344899999999999999999999999


Q ss_pred             ccccccCCCcccccc-----------------------cccccccccCc-------------chhhHHHHHHHHHhCCCC
Q 039276          150 STHLLLKEDQSLTQI-----------------------QTLATISYMAP-------------DTYNFGIMIMETFSGKKP  193 (263)
Q Consensus       150 i~h~dlk~~nil~~~-----------------------~~~g~~~y~aP-------------Dv~SlG~il~ell~g~~P  193 (263)
                      ++||||||+||+.+.                       ...||+.|+||             |||||||++|||++|+.|
T Consensus       162 i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~p  241 (383)
T 3eb0_A          162 ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPL  241 (383)
T ss_dssp             EECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             CccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCC
Confidence            999999999999642                       12467889999             999999999999999999


Q ss_pred             CccccCCCchhhhHhhhcCCCchhhhhhhcc---------cccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          194 TIKFFHGEMTLKHWVNDLLPNSVMKVVSANL---------LSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       194 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      |..... ...+..............+.....         ......+...+..+++++.+++.+||+.||++|||+.|+
T Consensus       242 f~~~~~-~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~  319 (383)
T 3eb0_A          242 FSGETS-IDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEA  319 (383)
T ss_dssp             SCCSSH-HHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred             CCCCCh-HHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHH
Confidence            974311 122222222222221111111000         000111112334567789999999999999999998764

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=5.8e-37  Score=280.41  Aligned_cols=208  Identities=15%  Similarity=0.178  Sum_probs=171.5

Q ss_pred             cccccccceecccCceEEEEEE-ecCCceEEEEEeecC---CCchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCeeEE
Q 039276           31 LFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQ---YGGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFKAL  105 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~---~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~l  105 (263)
                      ..+|+..+.||+|+||.||++. ..+++.||||++...   ..........|..++..+ +|++|+++++++.+.+..|+
T Consensus       340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~l  419 (674)
T 3pfq_A          340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF  419 (674)
T ss_dssp             CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEE
T ss_pred             ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEE
Confidence            3579999999999999999999 456889999999754   234456677889999887 79999999999999999999


Q ss_pred             EEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc---------------------
Q 039276          106 ILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI---------------------  164 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~---------------------  164 (263)
                      ||||+++|+|.+++...+. +++..++.++.||+.||+|||+++|+||||||+||+++.                     
T Consensus       420 V~E~~~gg~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~  498 (674)
T 3pfq_A          420 VMEYVNGGDLMYHIQQVGR-FKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT  498 (674)
T ss_dssp             EEECCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECCCTTCC
T ss_pred             EEeCcCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeeccccCCcc
Confidence            9999999999999987554 899999999999999999999999999999999999532                     


Q ss_pred             --cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccc
Q 039276          165 --QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDE  230 (263)
Q Consensus       165 --~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (263)
                        ...||+.|+||            |||||||++|||++|+.||..... ...+.....            .        
T Consensus       499 ~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~-~~~~~~i~~------------~--------  557 (674)
T 3pfq_A          499 TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-DELFQSIME------------H--------  557 (674)
T ss_dssp             BCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHS------------S--------
T ss_pred             cccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH-HHHHHHHHh------------C--------
Confidence              23579999999            999999999999999999864211 111111111            0        


Q ss_pred             cccchHHHHHHHHHhhccccccCcCCCCCc
Q 039276          231 HFMTKEQCMSFVFNLAMECTVESPNQRINA  260 (263)
Q Consensus       231 ~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~  260 (263)
                      ....+..+++++.+|+.+||+.||++||++
T Consensus       558 ~~~~p~~~s~~~~~li~~lL~~dP~~R~~~  587 (674)
T 3pfq_A          558 NVAYPKSMSKEAVAICKGLMTKHPGKRLGC  587 (674)
T ss_dssp             CCCCCTTSCHHHHHHHHHHSCSSSTTCTTC
T ss_pred             CCCCCccCCHHHHHHHHHHccCCHHHCCCC
Confidence            011234567789999999999999999997

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=100.00  E-value=5.1e-37  Score=253.91  Aligned_cols=213  Identities=23%  Similarity=0.320  Sum_probs=161.7

Q ss_pred             cccccccceecccCceEEEEEEec--CCc--eEEEEEeecC---CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCee
Q 039276           31 LFLFSESNLISRGGFGSIYKAKIQ--DGM--EVVVKGFNLQ---YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFK  103 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~~--~~~--~v~vK~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~  103 (263)
                      ..+|+..+.||+|+||.||+|.+.  ++.  .|++|++...   .....+.+.+|+++++.++|+||+++++++.+.. .
T Consensus        17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~   95 (291)
T 1u46_A           17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M   95 (291)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred             hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence            356999999999999999999843  233  6899998754   2345677889999999999999999999997765 7


Q ss_pred             EEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc------------------
Q 039276          104 ALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ------------------  165 (263)
Q Consensus       104 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~------------------  165 (263)
                      ++++|++++++|.+++......+++..+..++.|++.||+|||+++++|+||||+||+.+..                  
T Consensus        96 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~  175 (291)
T 1u46_A           96 KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND  175 (291)
T ss_dssp             EEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-C
T ss_pred             eeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEccccccccccccc
Confidence            99999999999999998765558999999999999999999999999999999999995431                  


Q ss_pred             --------ccccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcc
Q 039276          166 --------TLATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANL  224 (263)
Q Consensus       166 --------~~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (263)
                              ..++..|+||            ||||||+++++|++ |+.||...... ........               
T Consensus       176 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-~~~~~~~~---------------  239 (291)
T 1u46_A          176 DHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS-QILHKIDK---------------  239 (291)
T ss_dssp             CEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-HHHHHHHT---------------
T ss_pred             cchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH-HHHHHHHc---------------
Confidence                    1345679999            99999999999999 99998643110 00110000               


Q ss_pred             cccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          225 LSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       225 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                         .....+.+..+++++.+++.+||..||++|||+.+|
T Consensus       240 ---~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l  275 (291)
T 1u46_A          240 ---EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL  275 (291)
T ss_dssp             ---SCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             ---cCCCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHH
Confidence               001112334567789999999999999999999764

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=5.9e-37  Score=254.11  Aligned_cols=215  Identities=18%  Similarity=0.183  Sum_probs=167.8

Q ss_pred             cccccccceecccCceEEEEEEe-cCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEe-ecCCeeEEEEe
Q 039276           31 LFLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSC-SKDDFKALILE  108 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-~~~~~~~lv~e  108 (263)
                      ..+|+..+.||+|+||.||+|.. .+++.||+|++.....  ...+.+|+.+++.++|++++..+..+ ......+++||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e   85 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME   85 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence            35699999999999999999994 6799999999876532  34578899999999988876666655 56678899999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccc---c---------------------
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQ---I---------------------  164 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~---~---------------------  164 (263)
                      |+ +++|.+++......+++..++.++.|++.||+|||+++++|+||||+||+..   .                     
T Consensus        86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~  164 (296)
T 3uzp_A           86 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH  164 (296)
T ss_dssp             CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred             ec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccc
Confidence            99 8899999986555689999999999999999999999999999999999962   1                     


Q ss_pred             ---------cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCC--chhhhHhhhcCCCchhhhhh
Q 039276          165 ---------QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGE--MTLKHWVNDLLPNSVMKVVS  221 (263)
Q Consensus       165 ---------~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~  221 (263)
                               ...|++.|+||            |||||||++|||++|+.||......+  ..+.....            
T Consensus       165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~------------  232 (296)
T 3uzp_A          165 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISE------------  232 (296)
T ss_dssp             CBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHH------------
T ss_pred             cccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcc------------
Confidence                     12467889999            99999999999999999997542211  11111111            


Q ss_pred             hcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          222 ANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ......   .......+++++.+++.+||+.||++|||+++|
T Consensus       233 ~~~~~~---~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l  271 (296)
T 3uzp_A          233 KKMSTP---IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYL  271 (296)
T ss_dssp             HHHHSC---HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHH
T ss_pred             cccCCc---hHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHH
Confidence            000000   000123456779999999999999999998764

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=100.00  E-value=1.2e-36  Score=276.49  Aligned_cols=204  Identities=21%  Similarity=0.314  Sum_probs=163.3

Q ss_pred             ceecccCceEEEEEEec---CCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccCC
Q 039276           38 NLISRGGFGSIYKAKIQ---DGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPH  112 (263)
Q Consensus        38 ~~lg~g~~g~v~~~~~~---~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~  112 (263)
                      +.||+|+||.||+|.+.   .++.||||+++...  ....+.+.+|+++++.++|+||+++++++.+. ..++||||+++
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~-~~~lv~E~~~~  453 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAEL  453 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEEEEECCTT
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CEEEEEEccCC
Confidence            47999999999999642   46789999997652  23467889999999999999999999998654 57899999999


Q ss_pred             CCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc--------------------------c
Q 039276          113 GSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ--------------------------T  166 (263)
Q Consensus       113 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~--------------------------~  166 (263)
                      |+|.+++..... +++..++.++.||+.||+|||+++|+||||||+||+++..                          .
T Consensus       454 g~L~~~l~~~~~-l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~  532 (635)
T 4fl3_A          454 GPLNKYLQQNRH-VKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG  532 (635)
T ss_dssp             EEHHHHHHHCTT-CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-----------
T ss_pred             CCHHHHHhhCCC-CCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccCC
Confidence            999999976554 8999999999999999999999999999999999995432                          1


Q ss_pred             cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccccc
Q 039276          167 LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFM  233 (263)
Q Consensus       167 ~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (263)
                      .+++.|+||            |||||||++|||++ |+.||......  .+            ...+..      ..+..
T Consensus       533 ~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--~~------------~~~i~~------~~~~~  592 (635)
T 4fl3_A          533 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--EV------------TAMLEK------GERMG  592 (635)
T ss_dssp             --CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HH------------HHHHHT------TCCCC
T ss_pred             CCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HH------------HHHHHc------CCCCC
Confidence            345779999            99999999999998 99998642111  01            111111      11122


Q ss_pred             chHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          234 TKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       234 ~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .+..+++++.+++.+||+.||++|||+++|
T Consensus       593 ~p~~~~~~l~~li~~cl~~dP~~RPs~~~l  622 (635)
T 4fl3_A          593 CPAGCPREMYDLMNLCWTYDVENRPGFAAV  622 (635)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred             CCCCCCHHHHHHHHHHcCCCHhHCcCHHHH
Confidence            345677889999999999999999999764

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=100.00  E-value=6.2e-37  Score=255.14  Aligned_cols=210  Identities=15%  Similarity=0.230  Sum_probs=165.3

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCC----CchHHHHHHHHHHHhhcCCCcceeEeeEee--cCCeeE
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY----GGAFKNLDVECNMMKIIRHQNLIKIISSCS--KDDFKA  104 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~----~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~--~~~~~~  104 (263)
                      .+|...+.||+|+||.||++.. .+++.+++|++....    ......+.+|+++++.++|+||+++++++.  +....+
T Consensus         5 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (305)
T 2wtk_C            5 GKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMY   84 (305)
T ss_dssp             CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEE
T ss_pred             cceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEE
Confidence            4699999999999999999994 568999999997542    345677889999999999999999999984  456789


Q ss_pred             EEEeccCCCCHhhhhhhC-CCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc------------------
Q 039276          105 LILECMPHGSLGKCLSTS-NYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ------------------  165 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~------------------  165 (263)
                      ++|||++++ |.+++... ...+++..++.++.|++.||+|||+++++|+||||+||+.+..                  
T Consensus        85 lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~  163 (305)
T 2wtk_C           85 MVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFA  163 (305)
T ss_dssp             EEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTC
T ss_pred             EEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeeccccccccCccc
Confidence            999999875 77766543 3348999999999999999999999999999999999995321                  


Q ss_pred             -------ccccccccCc--------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcc
Q 039276          166 -------TLATISYMAP--------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANL  224 (263)
Q Consensus       166 -------~~g~~~y~aP--------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (263)
                             ..|++.|+||              |||||||++|||++|+.||....     ......         .+... 
T Consensus       164 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~---------~i~~~-  228 (305)
T 2wtk_C          164 ADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN-----IYKLFE---------NIGKG-  228 (305)
T ss_dssp             SSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHH---------HHHHC-
T ss_pred             cccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch-----HHHHHH---------HHhcC-
Confidence                   2478889999              99999999999999999986421     111100         00000 


Q ss_pred             cccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          225 LSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       225 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                            ....+..+++++.+++.+||+.||++|||++|+
T Consensus       229 ------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l  261 (305)
T 2wtk_C          229 ------SYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQI  261 (305)
T ss_dssp             ------CCCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred             ------CCCCCCccCHHHHHHHHHHccCChhhCCCHHHH
Confidence                  011234556779999999999999999999764

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=100.00  E-value=9.9e-37  Score=254.98  Aligned_cols=213  Identities=21%  Similarity=0.345  Sum_probs=163.2

Q ss_pred             cccccccceecccCceEEEEEEec----CCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecCC---
Q 039276           31 LFLFSESNLISRGGFGSIYKAKIQ----DGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDD---  101 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~~----~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~---  101 (263)
                      ..+|...+.||+|+||.||+|...    ++..||+|.+....  ....+.+.+|+.+++.++||||+++++++.+..   
T Consensus        33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~  112 (313)
T 3brb_A           33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQG  112 (313)
T ss_dssp             GGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-----
T ss_pred             HHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccC
Confidence            356999999999999999999843    34589999997653  234567889999999999999999999987654   


Q ss_pred             --eeEEEEeccCCCCHhhhhhh-----CCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc---------
Q 039276          102 --FKALILECMPHGSLGKCLST-----SNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ---------  165 (263)
Q Consensus       102 --~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~---------  165 (263)
                        ..++++||+++++|.+++..     ....+++..++.++.|++.||.|||+++++|+||||+||+.+..         
T Consensus       113 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kl~Dfg  192 (313)
T 3brb_A          113 IPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFG  192 (313)
T ss_dssp             --CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSCEEECSCS
T ss_pred             CcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEEeecC
Confidence              45999999999999999843     22348999999999999999999999999999999999995432         


Q ss_pred             ----------------ccccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCch
Q 039276          166 ----------------TLATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSV  216 (263)
Q Consensus       166 ----------------~~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~  216 (263)
                                      ..+++.|+||            |||||||++|+|++ |..||....... .......       
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-~~~~~~~-------  264 (313)
T 3brb_A          193 LSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE-MYDYLLH-------  264 (313)
T ss_dssp             CC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG-HHHHHHT-------
T ss_pred             cceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH-HHHHHHc-------
Confidence                            1346679999            99999999999999 889986431111 1110100       


Q ss_pred             hhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          217 MKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                                  ..+...+..+++++.+++.+||..||++|||+++|
T Consensus       265 ------------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l  299 (313)
T 3brb_A          265 ------------GHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVL  299 (313)
T ss_dssp             ------------TCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHH
T ss_pred             ------------CCCCCCCccccHHHHHHHHHHcCCChhhCcCHHHH
Confidence                        00112234566779999999999999999999764

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=100.00  E-value=6.1e-37  Score=253.92  Aligned_cols=215  Identities=18%  Similarity=0.186  Sum_probs=164.3

Q ss_pred             cccccccceecccCceEEEEEEe-cCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEe-ecCCeeEEEEe
Q 039276           31 LFLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSC-SKDDFKALILE  108 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-~~~~~~~lv~e  108 (263)
                      .++|+..+.||+|+||.||+|.. .+++.||+|++.....  ...+.+|+.+++.++|++++..+..+ .+....+++||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e   85 (296)
T 4hgt_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME   85 (296)
T ss_dssp             ---CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             CCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEE
Confidence            35699999999999999999994 6689999998765532  23477899999999888777666655 56678899999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccc---cc---------------------
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLT---QI---------------------  164 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~---~~---------------------  164 (263)
                      ++ +++|.+++......+++..++.++.|++.||+|||+++++|+||||+||+.   ..                     
T Consensus        86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~  164 (296)
T 4hgt_A           86 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH  164 (296)
T ss_dssp             CC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred             cc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccC
Confidence            99 889999998655568999999999999999999999999999999999996   22                     


Q ss_pred             ---------cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCC--chhhhHhhhcCCCchhhhhh
Q 039276          165 ---------QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGE--MTLKHWVNDLLPNSVMKVVS  221 (263)
Q Consensus       165 ---------~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~  221 (263)
                               ...||+.|+||            |||||||++|+|++|+.||.......  ..+...            ..
T Consensus       165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~------------~~  232 (296)
T 4hgt_A          165 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERI------------SE  232 (296)
T ss_dssp             CBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHH------------HH
T ss_pred             ccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhh------------hc
Confidence                     12468889999            99999999999999999997542221  111111            11


Q ss_pred             hcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          222 ANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ......   .......+++++.+++.+||+.||++|||+++|
T Consensus       233 ~~~~~~---~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l  271 (296)
T 4hgt_A          233 KKMSTP---IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYL  271 (296)
T ss_dssp             HHHHSC---HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHH
T ss_pred             ccccch---hhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHH
Confidence            100000   000113446779999999999999999998764

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=100.00  E-value=7.9e-37  Score=261.63  Aligned_cols=228  Identities=15%  Similarity=0.152  Sum_probs=169.3

Q ss_pred             cccccccceecccCceEEEEEE-ecCCceEEEEEeecCCC--chHHHHHHHHHHHhhcCCCcceeEeeEeecCCee----
Q 039276           31 LFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYG--GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFK----  103 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~--~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~----  103 (263)
                      ..+|...+.||+|+||.||+|. ..+++.||+|++.....  ...+.+.+|+.+++.++|+||+++++++...+..    
T Consensus        41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  120 (371)
T 4exu_A           41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  120 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred             cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence            3579999999999999999998 45689999999976532  3356788999999999999999999999776544    


Q ss_pred             --EEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc----------------
Q 039276          104 --ALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ----------------  165 (263)
Q Consensus       104 --~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~----------------  165 (263)
                        +++|||+. ++|.+++..   .+++..+..++.|++.||+|||+++++||||||+||+.+..                
T Consensus       121 ~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~  196 (371)
T 4exu_A          121 DFYLVMPFMQ-TDLQKIMGM---EFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADA  196 (371)
T ss_dssp             CCEEEEECCC-EEHHHHTTS---CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC-----
T ss_pred             eEEEEEcccc-ccHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCccccccc
Confidence              99999997 588887743   28999999999999999999999999999999999995432                


Q ss_pred             ----ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCC-----------chh
Q 039276          166 ----TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPN-----------SVM  217 (263)
Q Consensus       166 ----~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~-----------~~~  217 (263)
                          ..||+.|+||             |||||||++++|++|+.||...... ..+..........           ...
T Consensus       197 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~  275 (371)
T 4exu_A          197 EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL-DQLTQILKVTGVPGTEFVQKLNDKAAK  275 (371)
T ss_dssp             ---CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCHHHHTTCSCHHHH
T ss_pred             CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCcHHHHHHhhhhhhh
Confidence                3578899999             9999999999999999999643111 1111111111100           000


Q ss_pred             hhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          218 KVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ....................+++++.+++.+||+.||++|||++|+
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el  321 (371)
T 4exu_A          276 SYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQA  321 (371)
T ss_dssp             HHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred             hhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHH
Confidence            0000000000000001123457789999999999999999999764

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=1.5e-37  Score=266.66  Aligned_cols=206  Identities=14%  Similarity=0.103  Sum_probs=157.1

Q ss_pred             cccccccceecccCceEEEEEE-ecCCceEEEEEeecC---CCchHHHHHHHHH---HHhhcCCCcceeEe-------eE
Q 039276           31 LFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQ---YGGAFKNLDVECN---MMKIIRHQNLIKII-------SS   96 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~---~~~~~~~~~~e~~---~l~~~~h~~i~~~~-------~~   96 (263)
                      ...|...+.||+|+||.||+|. ..+++.||||++...   .....+.+.+|+.   .++.++||||++++       ++
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~  151 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  151 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence            3569999999999999999999 466999999999743   3345677889994   55555899999988       55


Q ss_pred             eecCC-----------------eeEEEEeccCCCCHhhhhhhCCC------cccHHHHHHHHHHHHHHHHHhccCCcccc
Q 039276           97 CSKDD-----------------FKALILECMPHGSLGKCLSTSNY------ILDFFQRLHIMIDVASAVEYLHFGHSTHL  153 (263)
Q Consensus        97 ~~~~~-----------------~~~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~i~~~i~~~l~~lH~~~i~h~  153 (263)
                      +.+.+                 ..|++|||+ +|+|.+++.....      .+++..++.++.|++.||+|||+++++||
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHr  230 (377)
T 3byv_A          152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHT  230 (377)
T ss_dssp             EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred             hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence            55443                 278999999 5799999986432      13357888899999999999999999999


Q ss_pred             ccCCCccccccc--------------------ccccccccCc-----------------------chhhHHHHHHHHHhC
Q 039276          154 LLKEDQSLTQIQ--------------------TLATISYMAP-----------------------DTYNFGIMIMETFSG  190 (263)
Q Consensus       154 dlk~~nil~~~~--------------------~~g~~~y~aP-----------------------Dv~SlG~il~ell~g  190 (263)
                      ||||+||+.+..                    ..| +.|+||                       |||||||++|||++|
T Consensus       231 Dikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg  309 (377)
T 3byv_A          231 YLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCA  309 (377)
T ss_dssp             CCCGGGEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHS
T ss_pred             CCCHHHEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHC
Confidence            999999996432                    245 788887                       999999999999999


Q ss_pred             CCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          191 KKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       191 ~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +.||........ .            ..+. .           ....+++++.+++.+||+.||++|||+.|+
T Consensus       310 ~~Pf~~~~~~~~-~------------~~~~-~-----------~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~  357 (377)
T 3byv_A          310 DLPITKDAALGG-S------------EWIF-R-----------SCKNIPQPVRALLEGFLRYPKEDRLLPLQA  357 (377)
T ss_dssp             SCCC------CC-S------------GGGG-S-----------SCCCCCHHHHHHHHHHTCSSGGGCCCHHHH
T ss_pred             CCCCcccccccc-h------------hhhh-h-----------hccCCCHHHHHHHHHHcCCCchhCCCHHHH
Confidence            999864311110 0            0000 0           012445679999999999999999999764

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=100.00  E-value=1.4e-36  Score=258.07  Aligned_cols=229  Identities=21%  Similarity=0.151  Sum_probs=168.9

Q ss_pred             cccccccceecccCceEEEEEEe-cCCceEEEEEeecCCC-chHHHHHHHHHHHhhcCCCcceeEeeEeecC-----Cee
Q 039276           31 LFLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYG-GAFKNLDVECNMMKIIRHQNLIKIISSCSKD-----DFK  103 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-----~~~  103 (263)
                      ..+|...+.||+|+||.||+|.. .+++.||||++..... .....+.+|+++++.++|+||+++++++...     ...
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   89 (353)
T 2b9h_A           10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV   89 (353)
T ss_dssp             CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred             ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence            35699999999999999999995 4689999999975432 3456678899999999999999999987653     578


Q ss_pred             EEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc------------------
Q 039276          104 ALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ------------------  165 (263)
Q Consensus       104 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~------------------  165 (263)
                      ++++|++. ++|.+++...  .+++..+..++.|++.||+|||+++++|+||||+||+.+..                  
T Consensus        90 ~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~  166 (353)
T 2b9h_A           90 YIIQELMQ-TDLHRVISTQ--MLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA  166 (353)
T ss_dssp             EEEECCCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred             EEEEeccC-ccHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEeccccccccccc
Confidence            99999997 5999988764  38899999999999999999999999999999999995321                  


Q ss_pred             ---------------ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCC---
Q 039276          166 ---------------TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPN---  214 (263)
Q Consensus       166 ---------------~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~---  214 (263)
                                     ..||+.|+||             |||||||++++|++|+.||...... ..+..........   
T Consensus       167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~  245 (353)
T 2b9h_A          167 ADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYR-HQLLLIFGIIGTPHSD  245 (353)
T ss_dssp             -------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCST
T ss_pred             ccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHHHHhCCCchh
Confidence                           1468889999             9999999999999999998743211 1111111100000   


Q ss_pred             ---------chhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          215 ---------SVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       215 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                               .......................+++++.+++.+||+.||++|||++|+
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el  303 (353)
T 2b9h_A          246 NDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEA  303 (353)
T ss_dssp             TTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             ccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHH
Confidence                     0000000000000000000123567789999999999999999999864

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=1.9e-36  Score=263.86  Aligned_cols=164  Identities=16%  Similarity=0.232  Sum_probs=141.2

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCCCchHHHHHHHHHHHhhc------CCCcceeEeeEeecCCeeE
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKII------RHQNLIKIISSCSKDDFKA  104 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~------~h~~i~~~~~~~~~~~~~~  104 (263)
                      .+|+..+.||+|+||.||+|. ..+++.||||++... ......+.+|+++++.+      +|+||+++++++......+
T Consensus        97 ~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  175 (429)
T 3kvw_A           97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHIC  175 (429)
T ss_dssp             TTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEE
T ss_pred             CcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEE
Confidence            569999999999999999998 455899999999754 23345667788887776      5779999999999999999


Q ss_pred             EEEeccCCCCHhhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc------------------
Q 039276          105 LILECMPHGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ------------------  165 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~------------------  165 (263)
                      ++||++. ++|.+++.... ..+++..+..++.|++.||+|||+++++||||||+||+++..                  
T Consensus       176 lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~  254 (429)
T 3kvw_A          176 MTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ  254 (429)
T ss_dssp             EEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCEETTC
T ss_pred             EEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccceecCC
Confidence            9999996 59999987654 338999999999999999999999999999999999996532                  


Q ss_pred             ----ccccccccCc------------chhhHHHHHHHHHhCCCCCccc
Q 039276          166 ----TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKF  197 (263)
Q Consensus       166 ----~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~  197 (263)
                          ..||+.|+||            |||||||++|||++|+.||...
T Consensus       255 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~  302 (429)
T 3kvw_A          255 RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE  302 (429)
T ss_dssp             CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence                2478889999            9999999999999999998643

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=100.00  E-value=1.4e-36  Score=252.24  Aligned_cols=212  Identities=18%  Similarity=0.214  Sum_probs=163.2

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeec-----------
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSK-----------   99 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----------   99 (263)
                      .+|+..+.||+|+||.||+|.. .+++.||+|.+... ....+.+.+|+.+++.++||||+++++++.+           
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   84 (303)
T 1zy4_A            6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV   84 (303)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-----
T ss_pred             ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccc
Confidence            4699999999999999999994 56899999999654 2345678899999999999999999998754           


Q ss_pred             --CCeeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc------------
Q 039276          100 --DDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ------------  165 (263)
Q Consensus       100 --~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~------------  165 (263)
                        .+..+++|||+++++|.+++......+++..++.++.|++.||+|||+++++|+||||+||+.+..            
T Consensus        85 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~  164 (303)
T 1zy4_A           85 KKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAK  164 (303)
T ss_dssp             -CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCCCS
T ss_pred             ccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEeeCcchh
Confidence              356899999999999999998766568888999999999999999999999999999999995321            


Q ss_pred             -------------------------ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhH
Q 039276          166 -------------------------TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHW  207 (263)
Q Consensus       166 -------------------------~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~  207 (263)
                                               ..|++.|+||             |||||||++|+|++   ||.........+...
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~~~~~  241 (303)
T 1zy4_A          165 NVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKL  241 (303)
T ss_dssp             CTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHH
T ss_pred             hcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHHHHHhc
Confidence                                     1367789999             99999999999998   543211111111111


Q ss_pred             hhhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          208 VNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ...                ...........+++.+.+++.+||+.||++|||++++
T Consensus       242 ~~~----------------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l  281 (303)
T 1zy4_A          242 RSV----------------SIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTL  281 (303)
T ss_dssp             HST----------------TCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             ccc----------------ccccCccccccchHHHHHHHHHHHhcCcccCcCHHHH
Confidence            000                0000011234455668999999999999999999764

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=100.00  E-value=2.3e-36  Score=262.79  Aligned_cols=226  Identities=17%  Similarity=0.222  Sum_probs=164.4

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecC------CeeE
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKD------DFKA  104 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~------~~~~  104 (263)
                      .+|+..+.||+|+||.||+|.. .+++.||||++.....    ...+|+++++.++|+||+++++++...      ...+
T Consensus        54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~  129 (420)
T 1j1b_A           54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN  129 (420)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred             ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence            4699999999999999999995 4689999999875432    123699999999999999999988432      2467


Q ss_pred             EEEeccCCCCHhhhhhh---CCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc----------------
Q 039276          105 LILECMPHGSLGKCLST---SNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ----------------  165 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~----------------  165 (263)
                      ++|||+++ ++.+.+..   ....+++..+..++.|++.||+|||+++|+||||||+||+++..                
T Consensus       130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~  208 (420)
T 1j1b_A          130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV  208 (420)
T ss_dssp             EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred             eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchhhhhcc
Confidence            99999986 66665542   33448999999999999999999999999999999999996421                


Q ss_pred             -------ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhh--c
Q 039276          166 -------TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSA--N  223 (263)
Q Consensus       166 -------~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~  223 (263)
                             ..||+.|+||             |||||||++|||++|+.||.... ....+..............+...  .
T Consensus       209 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~-~~~~l~~i~~~lg~p~~~~~~~~~~~  287 (420)
T 1j1b_A          209 RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS-GVDQLVEIIKVLGTPTREQIREMNPN  287 (420)
T ss_dssp             TTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHHHCSCCHHHHHHHCSC
T ss_pred             cCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHHHhCCCCHHHHHhhChh
Confidence                   2468889999             99999999999999999997431 11222222222221111111100  0


Q ss_pred             cc-------ccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          224 LL-------SREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       224 ~~-------~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ..       ...+........+++++.+|+.+||+.||++|||+.|+
T Consensus       288 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~  334 (420)
T 1j1b_A          288 YTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEA  334 (420)
T ss_dssp             CCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             hhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHH
Confidence            00       00000001123456789999999999999999998763

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=100.00  E-value=2.8e-36  Score=256.49  Aligned_cols=227  Identities=15%  Similarity=0.158  Sum_probs=168.6

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCe------
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDF------  102 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~------  102 (263)
                      .+|...+.||+|+||.||+|.. .+++.||||++....  ....+.+.+|+.+++.++|+||+++++++...+.      
T Consensus        24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~  103 (353)
T 3coi_A           24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD  103 (353)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred             ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence            5699999999999999999994 568999999997642  2335678899999999999999999999976643      


Q ss_pred             eEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------
Q 039276          103 KALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------  165 (263)
Q Consensus       103 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------  165 (263)
                      .+++||++. ++|.+++..   .+++..+..++.|++.||+|||+++++|+||||+||+.+..                 
T Consensus       104 ~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~  179 (353)
T 3coi_A          104 FYLVMPFMQ-TDLQKIMGL---KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE  179 (353)
T ss_dssp             CEEEEECCS-EEGGGTTTS---CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC----
T ss_pred             EEEEecccc-CCHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecccccCCCCC
Confidence            499999997 588888753   28999999999999999999999999999999999996432                 


Q ss_pred             ---ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhc-----------CCCchhh
Q 039276          166 ---TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDL-----------LPNSVMK  218 (263)
Q Consensus       166 ---~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~-----------~~~~~~~  218 (263)
                         ..|++.|+||             |||||||++++|++|+.||...... ..+.......           .......
T Consensus       180 ~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~  258 (353)
T 3coi_A          180 MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL-DQLTQILKVTGVPGTEFVQKLNDKAAKS  258 (353)
T ss_dssp             ----CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHH-HHHHHHHHHHCBCCHHHHTTCSCHHHHH
T ss_pred             ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHHHHhhHHHHH
Confidence               2568889999             9999999999999999999743211 1111111110           0000000


Q ss_pred             hhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          219 VVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ...................+++++.+++.+||+.||++|||++|+
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~  303 (353)
T 3coi_A          259 YIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQA  303 (353)
T ss_dssp             HHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred             HHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHH
Confidence            000000000000011224567789999999999999999999764

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=100.00  E-value=1.5e-36  Score=250.15  Aligned_cols=203  Identities=21%  Similarity=0.322  Sum_probs=163.9

Q ss_pred             ccccccceecccCceEEEEEEec-CCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeec-----------
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ-DGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSK-----------   99 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~-~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----------   99 (263)
                      .+|+..+.||+|+||.||++... +++.||+|.+....    ..+.+|+++++.++||||+++++++..           
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   86 (284)
T 2a19_B           11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKN   86 (284)
T ss_dssp             HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-------
T ss_pred             cccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccc
Confidence            45999999999999999999954 79999999997653    345679999999999999999998754           


Q ss_pred             -----CCeeEEEEeccCCCCHhhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc---------
Q 039276          100 -----DDFKALILECMPHGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI---------  164 (263)
Q Consensus       100 -----~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~---------  164 (263)
                           ....+++|||+++++|.+++.... ..+++..++.++.|++.||+|||+++++|+||||+||+...         
T Consensus        87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Df  166 (284)
T 2a19_B           87 SSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDF  166 (284)
T ss_dssp             --CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCC
T ss_pred             ccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEEECcc
Confidence                 345799999999999999997542 34889999999999999999999999999999999998432         


Q ss_pred             -------------cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhh
Q 039276          165 -------------QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKV  219 (263)
Q Consensus       165 -------------~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~  219 (263)
                                   ...|++.|+||            ||||||+++++|++|..|+....   ......            
T Consensus       167 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~---~~~~~~------------  231 (284)
T 2a19_B          167 GLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS---KFFTDL------------  231 (284)
T ss_dssp             TTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH---HHHHHH------------
T ss_pred             hhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH---HHHHHh------------
Confidence                         22478889999            99999999999999999964210   000000            


Q ss_pred             hhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          220 VSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ...          ..+..+++++.+++.+||+.||++|||+.|+
T Consensus       232 ~~~----------~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~  265 (284)
T 2a19_B          232 RDG----------IISDIFDKKEKTLLQKLLSKKPEDRPNTSEI  265 (284)
T ss_dssp             HTT----------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             hcc----------cccccCCHHHHHHHHHHccCChhhCcCHHHH
Confidence            000          0122345568999999999999999999764

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=100.00  E-value=3.6e-36  Score=250.17  Aligned_cols=214  Identities=13%  Similarity=0.164  Sum_probs=158.7

Q ss_pred             cccccc-ceecccCceEEEEEEe-cCCceEEEEEeecCCCchHHHHHHHHHHH-hhcCCCcceeEeeEeec----CCeeE
Q 039276           32 FLFSES-NLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGAFKNLDVECNMM-KIIRHQNLIKIISSCSK----DDFKA  104 (263)
Q Consensus        32 ~~y~~~-~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~~~~~~~~e~~~l-~~~~h~~i~~~~~~~~~----~~~~~  104 (263)
                      .+|... +.||+|+||.||++.. .+++.||+|.+...     ....+|++++ +..+|+||+++++++.+    ....+
T Consensus        17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   91 (299)
T 3m2w_A           17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL   91 (299)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence            446666 7899999999999984 56899999998643     4566788887 55699999999999876    66789


Q ss_pred             EEEeccCCCCHhhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc---------cccccccC
Q 039276          105 LILECMPHGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT---------LATISYMA  174 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~---------~g~~~y~a  174 (263)
                      ++|||+++++|.+++.... ..+++..++.++.|++.||+|||+++++|+||||+||+.+...         .|......
T Consensus        92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~  171 (299)
T 3m2w_A           92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT  171 (299)
T ss_dssp             EEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT
T ss_pred             EEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEeccccccccc
Confidence            9999999999999998754 3489999999999999999999999999999999999987521         11111111


Q ss_pred             -----c--chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhc
Q 039276          175 -----P--DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAM  247 (263)
Q Consensus       175 -----P--Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  247 (263)
                           +  |||||||++|||++|+.||.........          .......   .........+....+++++.+++.
T Consensus       172 ~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~----------~~~~~~~---~~~~~~~~~~~~~~~~~~~~~li~  238 (299)
T 3m2w_A          172 GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS----------PGMKTRI---RMGQYEFPNPEWSEVSEEVKMLIR  238 (299)
T ss_dssp             TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-----------------CCSCCSS---CTTCCSSCHHHHTTSCHHHHHHHH
T ss_pred             cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh----------HHHHHHH---hhccccCCchhcccCCHHHHHHHH
Confidence                 1  9999999999999999998643111100          0000000   000000000112456778999999


Q ss_pred             cccccCcCCCCCccCC
Q 039276          248 ECTVESPNQRINAKEM  263 (263)
Q Consensus       248 ~cl~~~p~~Rpt~~ev  263 (263)
                      +||+.||++|||++|+
T Consensus       239 ~~l~~dP~~Rps~~e~  254 (299)
T 3m2w_A          239 NLLKTEPTQRMTITEF  254 (299)
T ss_dssp             HHTCSSTTTSCCHHHH
T ss_pred             HHcccChhhCCCHHHH
Confidence            9999999999999764

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=100.00  E-value=2.8e-36  Score=261.08  Aligned_cols=161  Identities=21%  Similarity=0.267  Sum_probs=129.3

Q ss_pred             cccc-cceecccCceEEEEEEec---CCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEee--cCCeeEEE
Q 039276           33 LFSE-SNLISRGGFGSIYKAKIQ---DGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCS--KDDFKALI  106 (263)
Q Consensus        33 ~y~~-~~~lg~g~~g~v~~~~~~---~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~--~~~~~~lv  106 (263)
                      .|+. +++||+|+||.||+|...   +++.||+|.+....  ....+.+|+++++.++||||+++++++.  .....++|
T Consensus        21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv   98 (405)
T 3rgf_A           21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLL   98 (405)
T ss_dssp             HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEE
T ss_pred             hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEE
Confidence            4655 558999999999999854   47889999997553  3356778999999999999999999994  46789999


Q ss_pred             EeccCCCCHhhhhhhCC--------CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccc----c----------
Q 039276          107 LECMPHGSLGKCLSTSN--------YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQ----I----------  164 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~~~--------~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~----~----------  164 (263)
                      |||+.+ +|.+++....        ..+++..++.++.|++.||+|||+++++||||||+||++.    .          
T Consensus        99 ~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg  177 (405)
T 3rgf_A           99 FDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMG  177 (405)
T ss_dssp             EECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTT
T ss_pred             EeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECC
Confidence            999975 8888775321        1388899999999999999999999999999999999972    1          


Q ss_pred             ----------------cccccccccCc-------------chhhHHHHHHHHHhCCCCCcc
Q 039276          165 ----------------QTLATISYMAP-------------DTYNFGIMIMETFSGKKPTIK  196 (263)
Q Consensus       165 ----------------~~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~  196 (263)
                                      ...||+.|+||             |||||||++|||++|+.||..
T Consensus       178 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~  238 (405)
T 3rgf_A          178 FARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC  238 (405)
T ss_dssp             CCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             CceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCC
Confidence                            12468889999             999999999999999999964

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=100.00  E-value=5.9e-36  Score=252.35  Aligned_cols=228  Identities=17%  Similarity=0.220  Sum_probs=170.9

Q ss_pred             ccccccceecccCceEEEEEEe--cCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCC------cceeEeeEeecCCee
Q 039276           32 FLFSESNLISRGGFGSIYKAKI--QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQ------NLIKIISSCSKDDFK  103 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~--~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~------~i~~~~~~~~~~~~~  103 (263)
                      .+|+..+.||+|+||.||+|..  .+++.||+|++... ......+.+|+++++.++|+      +++++++++.+.+..
T Consensus        14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~   92 (339)
T 1z57_A           14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHI   92 (339)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEE
T ss_pred             CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcE
Confidence            4699999999999999999985  35889999998754 23456778899999888765      499999999999999


Q ss_pred             EEEEeccCCCCHhhhhhhCCC-cccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc------------------
Q 039276          104 ALILECMPHGSLGKCLSTSNY-ILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI------------------  164 (263)
Q Consensus       104 ~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~------------------  164 (263)
                      +++||++ +++|.+++..... .+++..+..++.|++.||+|||+++++||||||+||+...                  
T Consensus        93 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~  171 (339)
T 1z57_A           93 CIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTL  171 (339)
T ss_dssp             EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEE
T ss_pred             EEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccccccccc
Confidence            9999999 7899999976542 4789999999999999999999999999999999999643                  


Q ss_pred             ---------------------cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhc
Q 039276          165 ---------------------QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDL  211 (263)
Q Consensus       165 ---------------------~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~  211 (263)
                                           ...||+.|+||            |||||||++|||++|+.||......+ .........
T Consensus       172 ~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~~~~~~  250 (339)
T 1z57_A          172 INPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE-HLAMMERIL  250 (339)
T ss_dssp             SCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHH-HHHHHHHHH
T ss_pred             cCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHh
Confidence                                 12568889999            99999999999999999996432111 111111110


Q ss_pred             CCCchh-------------------------hhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          212 LPNSVM-------------------------KVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       212 ~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .+....                         ...... ..............++++.+++.+||+.||++|||++||
T Consensus       251 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~el  326 (339)
T 1z57_A          251 GPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRA-CKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREA  326 (339)
T ss_dssp             CSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHH-CCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred             CCCCHHHHhhccchhHHhhccccccccccccchhhhc-CcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHH
Confidence            000000                         000000 000011112234667889999999999999999999864

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=100.00  E-value=4.6e-36  Score=252.90  Aligned_cols=208  Identities=21%  Similarity=0.235  Sum_probs=155.6

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCCCchHHHHHHHHHHHhhcC-CCcceeEeeEee--------cCC
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIR-HQNLIKIISSCS--------KDD  101 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~--------~~~  101 (263)
                      .+|+..+.||+|+||.||++.. .+++.||+|++..........+.+|+.+++.+. |+||+++++++.        ...
T Consensus        28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~  107 (337)
T 3ll6_A           28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQA  107 (337)
T ss_dssp             EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSE
T ss_pred             ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCc
Confidence            3599999999999999999994 568999999997766566777889999999995 999999999983        334


Q ss_pred             eeEEEEeccCCCCHhhhhhh--CCCcccHHHHHHHHHHHHHHHHHhccCC--ccccccCCCccccccc------------
Q 039276          102 FKALILECMPHGSLGKCLST--SNYILDFFQRLHIMIDVASAVEYLHFGH--STHLLLKEDQSLTQIQ------------  165 (263)
Q Consensus       102 ~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~~--i~h~dlk~~nil~~~~------------  165 (263)
                      ..++++||+. |+|.+++..  ....+++..++.++.|++.||+|||.++  ++|+||||+||+.+..            
T Consensus       108 ~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~  186 (337)
T 3ll6_A          108 EFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSAT  186 (337)
T ss_dssp             EEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCB
T ss_pred             eEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCccce
Confidence            5799999996 699998864  3334899999999999999999999999  9999999999995431            


Q ss_pred             -----------------------ccccccccCc---------------chhhHHHHHHHHHhCCCCCccccCCCchhhhH
Q 039276          166 -----------------------TLATISYMAP---------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHW  207 (263)
Q Consensus       166 -----------------------~~g~~~y~aP---------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~  207 (263)
                                             ..|++.|+||               |||||||++|+|++|+.||.......      
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~------  260 (337)
T 3ll6_A          187 TISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR------  260 (337)
T ss_dssp             CCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-------------
T ss_pred             eccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH------
Confidence                                   1377889998               99999999999999999986421110      


Q ss_pred             hhhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          208 VNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                                 +......      .+....+++.+.+++.+||+.||++|||+.|+
T Consensus       261 -----------~~~~~~~------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~  299 (337)
T 3ll6_A          261 -----------IVNGKYS------IPPHDTQYTVFHSLIRAMLQVNPEERLSIAEV  299 (337)
T ss_dssp             ----------------CC------CCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHH
T ss_pred             -----------hhcCccc------CCcccccchHHHHHHHHHccCChhhCcCHHHH
Confidence                       0000000      01122233448899999999999999998764

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=100.00  E-value=3.6e-36  Score=254.26  Aligned_cols=217  Identities=16%  Similarity=0.161  Sum_probs=151.1

Q ss_pred             ccccccccc-eecccCceEEEEEEe-cCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeec----CCee
Q 039276           30 GLFLFSESN-LISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSK----DDFK  103 (263)
Q Consensus        30 ~~~~y~~~~-~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~----~~~~  103 (263)
                      ...+|...+ .||+|+||.||+|.. .+++.||+|++....    ....+....++.++|+|++++++++..    ....
T Consensus        26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~  101 (336)
T 3fhr_A           26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL  101 (336)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence            345688854 699999999999994 468999999987541    112222334566799999999999865    4458


Q ss_pred             EEEEeccCCCCHhhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------
Q 039276          104 ALILECMPHGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------  165 (263)
Q Consensus       104 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------  165 (263)
                      ++||||+++++|.+++.... ..+++..++.++.|++.||+|||+++++|+||||+||+....                 
T Consensus       102 ~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~  181 (336)
T 3fhr_A          102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKET  181 (336)
T ss_dssp             EEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred             EEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccccceec
Confidence            99999999999999998654 348999999999999999999999999999999999996421                 


Q ss_pred             -------ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccc
Q 039276          166 -------TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLS  226 (263)
Q Consensus       166 -------~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (263)
                             ..|++.|+||            |||||||++|+|++|+.||........... .         ...+   ...
T Consensus       182 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~-~---------~~~~---~~~  248 (336)
T 3fhr_A          182 TQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPG-M---------KRRI---RLG  248 (336)
T ss_dssp             ----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC--------------------------------
T ss_pred             cccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhh-H---------HHhh---hcc
Confidence                   2457889999            999999999999999999864322111000 0         0000   000


Q ss_pred             cccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          227 REDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       227 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ......+....+++++.+++.+||+.||++|||++|+
T Consensus       249 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el  285 (336)
T 3fhr_A          249 QYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQF  285 (336)
T ss_dssp             --CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             ccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHH
Confidence            0000111224567779999999999999999999764

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=100.00  E-value=1.1e-35  Score=253.93  Aligned_cols=201  Identities=13%  Similarity=0.109  Sum_probs=160.2

Q ss_pred             ccccccceecccCceEEEEEE------ecCCceEEEEEeecCCCchHHHHHHHHHHHhhcC---CCcceeEeeEeecCCe
Q 039276           32 FLFSESNLISRGGFGSIYKAK------IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIR---HQNLIKIISSCSKDDF  102 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~------~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~---h~~i~~~~~~~~~~~~  102 (263)
                      .+|...+.||+|+||.||+|.      ..+++.||+|++...   ....+..|+++++.+.   |+|++++++++...+.
T Consensus        65 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~  141 (365)
T 3e7e_A           65 KLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNG  141 (365)
T ss_dssp             SEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSC
T ss_pred             EEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCC
Confidence            569999999999999999993      456889999999755   3445667777777775   9999999999999999


Q ss_pred             eEEEEeccCCCCHhhhhhh----CCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-----------c--
Q 039276          103 KALILECMPHGSLGKCLST----SNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-----------Q--  165 (263)
Q Consensus       103 ~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-----------~--  165 (263)
                      .++||||+++|+|.+++..    ....+++..++.++.|++.||+|||+++|+||||||+||+++.           .  
T Consensus       142 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~  221 (365)
T 3e7e_A          142 SVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAG  221 (365)
T ss_dssp             EEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------CTT
T ss_pred             cEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCccccccccCC
Confidence            9999999999999999974    2344899999999999999999999999999999999999754           1  


Q ss_pred             -----------------------ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhh
Q 039276          166 -----------------------TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVND  210 (263)
Q Consensus       166 -----------------------~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~  210 (263)
                                             ..||+.|+||            |||||||++|||++|+.||.....+.......   
T Consensus       222 ~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~---  298 (365)
T 3e7e_A          222 LALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKPEGL---  298 (365)
T ss_dssp             EEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEEECSC---
T ss_pred             EEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCceeechh---
Confidence                                   1378899999            99999999999999999986432221111000   


Q ss_pred             cCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCc
Q 039276          211 LLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINA  260 (263)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~  260 (263)
                                        ..+    ...++.+.+++..|++.+|.+|++.
T Consensus       299 ------------------~~~----~~~~~~~~~~~~~~l~~~p~~r~~~  326 (365)
T 3e7e_A          299 ------------------FRR----LPHLDMWNEFFHVMLNIPDCHHLPS  326 (365)
T ss_dssp             ------------------CTT----CSSHHHHHHHHHHHHCCCCTTCCCC
T ss_pred             ------------------ccc----cCcHHHHHHHHHHHcCCCCCCcchH
Confidence                              000    0124457788999999999999643

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=100.00  E-value=4.3e-36  Score=273.89  Aligned_cols=211  Identities=20%  Similarity=0.297  Sum_probs=168.3

Q ss_pred             ccccccceecccCceEEEEEEec----CCceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ----DGMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALI  106 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~----~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv  106 (263)
                      .+|+..+.||+|+||.||+|...    .+..||+|.+.... ....+.+.+|+.+++.++||||+++++++.+ +..++|
T Consensus       390 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~~lv  468 (656)
T 2j0j_A          390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWII  468 (656)
T ss_dssp             GGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEE
T ss_pred             ccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-CceEEE
Confidence            56888999999999999999853    24578999887543 2345678899999999999999999999854 568999


Q ss_pred             EeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc---------------------
Q 039276          107 LECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ---------------------  165 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~---------------------  165 (263)
                      |||+++|+|.+++......+++..+..++.|++.||+|||+++++||||||+||+.+..                     
T Consensus       469 ~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~~  548 (656)
T 2j0j_A          469 MELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYK  548 (656)
T ss_dssp             EECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC-----
T ss_pred             EEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCeecCCCccee
Confidence            99999999999998766568999999999999999999999999999999999995432                     


Q ss_pred             ---ccccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccc
Q 039276          166 ---TLATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSRED  229 (263)
Q Consensus       166 ---~~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (263)
                         ..+++.|+||            |||||||++|||++ |..||...... ..+...            ..       .
T Consensus       549 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~-~~~~~i------------~~-------~  608 (656)
T 2j0j_A          549 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-DVIGRI------------EN-------G  608 (656)
T ss_dssp             -----CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-HHHHHH------------HH-------T
T ss_pred             ccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH-HHHHHH------------Hc-------C
Confidence               2346789999            99999999999997 99998642111 000000            00       1


Q ss_pred             ccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          230 EHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       230 ~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .+.+.+..+++++.+++.+||..||++|||+.+|
T Consensus       609 ~~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el  642 (656)
T 2j0j_A          609 ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL  642 (656)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             CCCCCCccccHHHHHHHHHHcCCChhHCcCHHHH
Confidence            1112345667789999999999999999999764

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=100.00  E-value=6.7e-37  Score=256.47  Aligned_cols=211  Identities=16%  Similarity=0.249  Sum_probs=166.8

Q ss_pred             ccccccceecccCceEEEEEEecCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      .+|+..+.||+|+||.||+|....  .+++|.+....  ....+.+.+|+.+++.++|+||+++++++.+.+..++++||
T Consensus        33 ~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~  110 (319)
T 2y4i_B           33 EQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSL  110 (319)
T ss_dssp             SCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBC
T ss_pred             HHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeec
Confidence            459999999999999999998653  58999987542  23345567799999999999999999999999899999999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc------------------------
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ------------------------  165 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~------------------------  165 (263)
                      +++++|.+++......+++..++.++.|++.||+|||+++++|+||||+||+.+..                        
T Consensus       111 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~~~~~~l~Dfg~~~~~~~~~~~~~~~~  190 (319)
T 2y4i_B          111 CKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYDNGKVVITDFGLFSISGVLQAGRREDK  190 (319)
T ss_dssp             CCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC--CCEECCCSCCC----------CCS
T ss_pred             ccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEeCCCEEEeecCCccccccccccccccc
Confidence            99999999998766568899999999999999999999999999999999995321                        


Q ss_pred             ---ccccccccCc---------------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhh
Q 039276          166 ---TLATISYMAP---------------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVS  221 (263)
Q Consensus       166 ---~~g~~~y~aP---------------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (263)
                         ..|++.|+||                     |||||||++|||++|+.||....... ........           
T Consensus       191 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~~~-----------  258 (319)
T 2y4i_B          191 LRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEA-IIWQMGTG-----------  258 (319)
T ss_dssp             CBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHH-HHHHHHTT-----------
T ss_pred             cccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHhccC-----------
Confidence               1367778887                     99999999999999999986421110 00000000           


Q ss_pred             hcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          222 ANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                        ....     .....+++++.+++.+||..||++|||+++|
T Consensus       259 --~~~~-----~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l  293 (319)
T 2y4i_B          259 --MKPN-----LSQIGMGKEISDILLFCWAFEQEERPTFTKL  293 (319)
T ss_dssp             --CCCC-----CCCSSCCTTHHHHHHHHHCSSTTTSCCHHHH
T ss_pred             --CCCC-----CCcCCCCHHHHHHHHHHhcCChhhCcCHHHH
Confidence              0000     0112344568999999999999999999764

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=100.00  E-value=5.8e-36  Score=260.94  Aligned_cols=210  Identities=18%  Similarity=0.237  Sum_probs=162.6

Q ss_pred             ccccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCeeEEEEecc
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      .+|...+.||+|+||+|+.....+++.||||++......   ...+|+++++.+ +||||+++++++.+....|++||++
T Consensus        24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~---~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~  100 (432)
T 3p23_A           24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS---FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC  100 (432)
T ss_dssp             EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE---ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH---HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECC
Confidence            459999999999999976555566999999999755322   345799999999 7999999999999999999999999


Q ss_pred             CCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc--------------------------
Q 039276          111 PHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI--------------------------  164 (263)
Q Consensus       111 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~--------------------------  164 (263)
                      . ++|.+++...........+..++.|++.||+|||+++++||||||+||++..                          
T Consensus       101 ~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~  179 (432)
T 3p23_A          101 A-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHS  179 (432)
T ss_dssp             S-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC------
T ss_pred             C-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcc
Confidence            6 5999999876554555566789999999999999999999999999999621                          


Q ss_pred             -----cccccccccCc---------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhc
Q 039276          165 -----QTLATISYMAP---------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSAN  223 (263)
Q Consensus       165 -----~~~g~~~y~aP---------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (263)
                           ...||+.|+||               |||||||+++||++ |..||......  .. .....   .         
T Consensus       180 ~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~--~~-~~~~~---~---------  244 (432)
T 3p23_A          180 FSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR--QA-NILLG---A---------  244 (432)
T ss_dssp             ------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH--HH-HHHTT---C---------
T ss_pred             eeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH--HH-HHHhc---c---------
Confidence                 12378899999               99999999999999 99998532111  00 00000   0         


Q ss_pred             ccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          224 LLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                         ............+..+.+++.+||+.||++|||++||
T Consensus       245 ---~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ev  281 (432)
T 3p23_A          245 ---CSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHV  281 (432)
T ss_dssp             ---CCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             ---CCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHH
Confidence               0000001123456668999999999999999999764

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=100.00  E-value=1.2e-35  Score=259.26  Aligned_cols=211  Identities=19%  Similarity=0.248  Sum_probs=159.8

Q ss_pred             cccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCeeEEEEeccC
Q 039276           33 LFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFKALILECMP  111 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~  111 (263)
                      .|...+.||+|+||+||.+...+|+.||||.+...   ..+.+.+|+++++.+ +||||+++++++.+.+..+++||++.
T Consensus        16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~   92 (434)
T 2rio_A           16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN   92 (434)
T ss_dssp             CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS
T ss_pred             eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC
Confidence            36778899999999998776667999999998754   345667899999876 89999999999999999999999996


Q ss_pred             CCCHhhhhhhCCCcc------cHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc--------------------
Q 039276          112 HGSLGKCLSTSNYIL------DFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ--------------------  165 (263)
Q Consensus       112 ~~~L~~~l~~~~~~~------~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~--------------------  165 (263)
                       |+|.+++.......      .+..++.++.|++.||+|||+++++||||||+||+.+..                    
T Consensus        93 -gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~D  171 (434)
T 2rio_A           93 -LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISD  171 (434)
T ss_dssp             -EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECC
T ss_pred             -CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceEEEEcc
Confidence             59999997654211      222356799999999999999999999999999997421                    


Q ss_pred             --------------------ccccccccCc-------------------chhhHHHHHHHHHh-CCCCCccccCCCchhh
Q 039276          166 --------------------TLATISYMAP-------------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLK  205 (263)
Q Consensus       166 --------------------~~g~~~y~aP-------------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~  205 (263)
                                          ..||+.|+||                   |||||||++|||++ |+.||.......   .
T Consensus       172 FG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~---~  248 (434)
T 2rio_A          172 FGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE---S  248 (434)
T ss_dssp             CTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH---H
T ss_pred             cccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH---H
Confidence                                1478889998                   99999999999999 999986432111   1


Q ss_pred             hHhhhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          206 HWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .........             ..........+++++.+++.+||+.||++|||+.||
T Consensus       249 ~i~~~~~~~-------------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ei  293 (434)
T 2rio_A          249 NIIRGIFSL-------------DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKV  293 (434)
T ss_dssp             HHHHTCCCC-------------CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             HHhcCCCCc-------------ccccccccccchHHHHHHHHHHhhCChhhCCCHHHH
Confidence            111111000             000111235678889999999999999999999764

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=100.00  E-value=7.6e-36  Score=257.49  Aligned_cols=227  Identities=18%  Similarity=0.232  Sum_probs=162.6

Q ss_pred             ccccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCC------eeEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDD------FKAL  105 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~------~~~l  105 (263)
                      .+|...+.||+|+||.||+|....+..+|+|++......    ..+|+++++.++|+||+++++++...+      ..++
T Consensus        40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l  115 (394)
T 4e7w_A           40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL  115 (394)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred             ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence            469999999999999999999766777999988654321    125999999999999999999985432      4789


Q ss_pred             EEeccCCCCHhhhhh--hCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccc-cc-----------------
Q 039276          106 ILECMPHGSLGKCLS--TSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQ-IQ-----------------  165 (263)
Q Consensus       106 v~e~~~~~~L~~~l~--~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~-~~-----------------  165 (263)
                      ||||++++.+.....  .....+++..++.++.|++.||+|||+++++||||||+||+.+ ..                 
T Consensus       116 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~  195 (394)
T 4e7w_A          116 VLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAG  195 (394)
T ss_dssp             EEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred             EeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCC
Confidence            999998743333221  2233489999999999999999999999999999999999965 21                 


Q ss_pred             -----ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhh--ccc
Q 039276          166 -----TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSA--NLL  225 (263)
Q Consensus       166 -----~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~  225 (263)
                           ..||+.|+||             |||||||++|||++|+.||..... ...+..............+...  ...
T Consensus       196 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~-~~~l~~i~~~~g~p~~~~~~~~~~~~~  274 (394)
T 4e7w_A          196 EPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESG-IDQLVEIIKVLGTPSREQIKTMNPNYM  274 (394)
T ss_dssp             CCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCCCCHHHHHHHCGGGS
T ss_pred             CCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHHHHhhChhhh
Confidence                 2468889999             999999999999999999964311 1122222222111111111100  000


Q ss_pred             -------ccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          226 -------SREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       226 -------~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                             ...+........+++++.+++.+||+.||++|||+.|+
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~  319 (394)
T 4e7w_A          275 EHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEA  319 (394)
T ss_dssp             SSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred             hhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHH
Confidence                   00000011123467789999999999999999998763

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=100.00  E-value=9.5e-36  Score=250.20  Aligned_cols=231  Identities=18%  Similarity=0.222  Sum_probs=167.3

Q ss_pred             cccccccceecccCceEEEEEEe--cCCceEEEEEeecCCC--chHHHHHHHHHHHhhc---CCCcceeEeeEee-----
Q 039276           31 LFLFSESNLISRGGFGSIYKAKI--QDGMEVVVKGFNLQYG--GAFKNLDVECNMMKII---RHQNLIKIISSCS-----   98 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~--~~~~~v~vK~~~~~~~--~~~~~~~~e~~~l~~~---~h~~i~~~~~~~~-----   98 (263)
                      ..+|+..+.||+|+||.||+|..  .+++.||+|++.....  .....+.+|+.+++.+   +||||+++++++.     
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~   89 (326)
T 1blx_A           10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   89 (326)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             hhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccC
Confidence            35699999999999999999996  4588999999975422  2233556777777666   8999999999986     


Q ss_pred             cCCeeEEEEeccCCCCHhhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc------------
Q 039276           99 KDDFKALILECMPHGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ------------  165 (263)
Q Consensus        99 ~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~------------  165 (263)
                      .....++++|++. ++|.+++.... ..+++..++.++.|++.||+|||.++++|+||||+||+.+..            
T Consensus        90 ~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~  168 (326)
T 1blx_A           90 RETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR  168 (326)
T ss_dssp             SEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred             CCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecCcccc
Confidence            4567899999997 59999997653 238899999999999999999999999999999999995321            


Q ss_pred             ----------ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhh---
Q 039276          166 ----------TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVV---  220 (263)
Q Consensus       166 ----------~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~---  220 (263)
                                ..|+..|+||            |||||||++|+|++|+.||...... ..+................   
T Consensus       169 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~  247 (326)
T 1blx_A          169 IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV-DQLGKILDVIGLPGEEDWPRDV  247 (326)
T ss_dssp             CCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCGGGSCTTC
T ss_pred             cccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH-HHHHHHHHHcCCCCcccCcccc
Confidence                      2468889999            9999999999999999998643211 1111111111100000000   


Q ss_pred             ---hhccc-ccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          221 ---SANLL-SREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       221 ---~~~~~-~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                         ..... ............+++++.+++.+||+.||++|||+.|+
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~  294 (326)
T 1blx_A          248 ALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA  294 (326)
T ss_dssp             SSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred             ccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHH
Confidence               00000 00000011224567789999999999999999998763

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=100.00  E-value=1.3e-35  Score=249.77  Aligned_cols=216  Identities=19%  Similarity=0.207  Sum_probs=155.7

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCCC-chHHHHHHHHH-HHhhcCCCcceeEeeEeecCCeeEEEEe
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYG-GAFKNLDVECN-MMKIIRHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~-~~~~~~~~e~~-~l~~~~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      .+|+..+.||+|+||.||+|.. .+++.||+|++..... .....+..|+. +++.++|+||+++++++.+.+..+++||
T Consensus        22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e  101 (327)
T 3aln_A           22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICME  101 (327)
T ss_dssp             CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEe
Confidence            4599999999999999999995 5689999999976532 23344555665 6777899999999999999999999999


Q ss_pred             ccCCCCHhhhhhh----CCCcccHHHHHHHHHHHHHHHHHhccC-CccccccCCCccccccc------------------
Q 039276          109 CMPHGSLGKCLST----SNYILDFFQRLHIMIDVASAVEYLHFG-HSTHLLLKEDQSLTQIQ------------------  165 (263)
Q Consensus       109 ~~~~~~L~~~l~~----~~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~h~dlk~~nil~~~~------------------  165 (263)
                      |+++ +|.+++..    ....+++..+..++.|++.||.|||.. +++|+||||+||+.+..                  
T Consensus       102 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~  180 (327)
T 3aln_A          102 LMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSI  180 (327)
T ss_dssp             CCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC-----
T ss_pred             ecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCceeccccc
Confidence            9986 88877753    233488999999999999999999999 99999999999995432                  


Q ss_pred             ----ccccccccCc----------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccc
Q 039276          166 ----TLATISYMAP----------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLL  225 (263)
Q Consensus       166 ----~~g~~~y~aP----------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (263)
                          ..|++.|+||                |||||||++|+|++|+.||.........+.            ....... 
T Consensus       181 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~------------~~~~~~~-  247 (327)
T 3aln_A          181 AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLT------------QVVKGDP-  247 (327)
T ss_dssp             -------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------C------------CCCCSCC-
T ss_pred             ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHH------------HHhcCCC-
Confidence                1578889998                999999999999999999864321111110            0000000 


Q ss_pred             ccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          226 SREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       226 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                        ..........+++++.+++.+||+.||++|||+++|
T Consensus       248 --~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el  283 (327)
T 3aln_A          248 --PQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKEL  283 (327)
T ss_dssp             --CCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             --CCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHH
Confidence              000001123456679999999999999999999764

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.4e-36  Score=253.97  Aligned_cols=204  Identities=18%  Similarity=0.268  Sum_probs=161.4

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCCCc------hHHHHHHHHHHHhhc----CCCcceeEeeEeecC
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGG------AFKNLDVECNMMKII----RHQNLIKIISSCSKD  100 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~------~~~~~~~e~~~l~~~----~h~~i~~~~~~~~~~  100 (263)
                      .+|+..+.||+|+||.||+|. ..+++.||+|.+......      ....+.+|+.++..+    +|+||+++++++.+.
T Consensus        31 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~  110 (312)
T 2iwi_A           31 AEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQ  110 (312)
T ss_dssp             --CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC---
T ss_pred             hceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecC
Confidence            459999999999999999998 456899999999765321      223345688888888    899999999999988


Q ss_pred             CeeEEEEec-cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccc-cc-------------
Q 039276          101 DFKALILEC-MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQ-IQ-------------  165 (263)
Q Consensus       101 ~~~~lv~e~-~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~-~~-------------  165 (263)
                      +..++++|+ +.+++|.+++..... +++..++.++.|++.||+|||+++++|+||||+||+.+ ..             
T Consensus       111 ~~~~~v~e~~~~~~~L~~~l~~~~~-~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~  189 (312)
T 2iwi_A          111 EGFMLVLERPLPAQDLFDYITEKGP-LGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGAL  189 (312)
T ss_dssp             --CEEEEECCSSEEEHHHHHHHHCS-CCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECCCSSCEE
T ss_pred             CeEEEEEEecCCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEEcchhhh
Confidence            889999999 788999999987544 89999999999999999999999999999999999965 21             


Q ss_pred             --------ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcc
Q 039276          166 --------TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANL  224 (263)
Q Consensus       166 --------~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (263)
                              ..|+..|+||             |||||||++|+|++|+.||....       .            ..... 
T Consensus       190 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-------~------------~~~~~-  249 (312)
T 2iwi_A          190 LHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ-------E------------ILEAE-  249 (312)
T ss_dssp             CCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------H------------HHHTC-
T ss_pred             cccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH-------H------------Hhhhc-
Confidence                    2467889999             99999999999999999986320       0            00000 


Q ss_pred             cccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          225 LSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       225 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                             ...+..+++++.+++.+||+.||++|||++|+
T Consensus       250 -------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~  281 (312)
T 2iwi_A          250 -------LHFPAHVSPDCCALIRRCLAPKPSSRPSLEEI  281 (312)
T ss_dssp             -------CCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred             -------cCCcccCCHHHHHHHHHHccCChhhCcCHHHH
Confidence                   01233456679999999999999999999764

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=100.00  E-value=6.5e-36  Score=255.70  Aligned_cols=230  Identities=13%  Similarity=0.154  Sum_probs=169.2

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCCCchHHHHHHHHHHHhhcC-----------CCcceeEeeEeec
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIR-----------HQNLIKIISSCSK   99 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~-----------h~~i~~~~~~~~~   99 (263)
                      .+|...+.||+|+||.||+|.. .+++.||+|++... ......+.+|+.+++.++           |+||+++++++..
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~   97 (373)
T 1q8y_A           19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH   97 (373)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred             CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence            4699999999999999999994 56899999999754 234566778999888876           7899999999875


Q ss_pred             CC----eeEEEEeccCCCCHhhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccC-CccccccCCCcccccc---------
Q 039276          100 DD----FKALILECMPHGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFG-HSTHLLLKEDQSLTQI---------  164 (263)
Q Consensus       100 ~~----~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~-~i~h~dlk~~nil~~~---------  164 (263)
                      .+    ..++++|++ +++|.+++.... ..+++..++.++.|++.||+|||++ +++||||||+||+...         
T Consensus        98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~  176 (373)
T 1q8y_A           98 KGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQ  176 (373)
T ss_dssp             EETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEE
T ss_pred             cCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcce
Confidence            43    789999999 889999997643 3489999999999999999999998 9999999999999631         


Q ss_pred             -----------------cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCC-----CchhhhHhhh
Q 039276          165 -----------------QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHG-----EMTLKHWVND  210 (263)
Q Consensus       165 -----------------~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~-----~~~~~~~~~~  210 (263)
                                       ...||+.|+||            |||||||++|||++|+.||......     ...+......
T Consensus       177 ~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~  256 (373)
T 1q8y_A          177 IKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIEL  256 (373)
T ss_dssp             EEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHH
T ss_pred             EEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHh
Confidence                             12578889999            9999999999999999999753211     1111111111


Q ss_pred             cCCCchhhhhhhc----------------------ccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          211 LLPNSVMKVVSAN----------------------LLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       211 ~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .............                      ...........+..+++++.+++.+||+.||++|||++||
T Consensus       257 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el  331 (373)
T 1q8y_A          257 LGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGL  331 (373)
T ss_dssp             HCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHH
T ss_pred             cCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHH
Confidence            1110000000000                      0000011122456788899999999999999999999864

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=100.00  E-value=1.4e-35  Score=252.59  Aligned_cols=230  Identities=16%  Similarity=0.182  Sum_probs=154.6

Q ss_pred             cccccccceecccCceEEEEEEe-cCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCC-------e
Q 039276           31 LFLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDD-------F  102 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-------~  102 (263)
                      .++|...+.||+|+||.||+|.. .+++.||||++.... .......++++.++.++|+||+++++++...+       .
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~  100 (360)
T 3e3p_A           22 MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIY  100 (360)
T ss_dssp             HTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEE
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhcccccccccee
Confidence            35799999999999999999995 568999999986553 23345567788888899999999999986533       3


Q ss_pred             eEEEEeccCCCCHhhhhhh---CCCcccHHHHHHHHHHHHHHHHHhc--cCCccccccCCCcccccc-c-----------
Q 039276          103 KALILECMPHGSLGKCLST---SNYILDFFQRLHIMIDVASAVEYLH--FGHSTHLLLKEDQSLTQI-Q-----------  165 (263)
Q Consensus       103 ~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lH--~~~i~h~dlk~~nil~~~-~-----------  165 (263)
                      .+++|||+++ +|...+..   ....+++..+..++.|++.||.|||  .++++||||||+||+.+. .           
T Consensus       101 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a  179 (360)
T 3e3p_A          101 LNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSA  179 (360)
T ss_dssp             EEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEECCCTTC
T ss_pred             EEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEeeCCCc
Confidence            7899999987 55444432   2334888999999999999999999  999999999999999653 1           


Q ss_pred             -----------ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCc--hhhh
Q 039276          166 -----------TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNS--VMKV  219 (263)
Q Consensus       166 -----------~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~--~~~~  219 (263)
                                 ..||+.|+||             |||||||++|||++|+.||..... ...+...........  ....
T Consensus       180 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~  258 (360)
T 3e3p_A          180 KKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNS-AGQLHEIVRVLGCPSREVLRK  258 (360)
T ss_dssp             BCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCCCCHHHHHH
T ss_pred             eecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCCh-HHHHHHHHHHcCCCCHHHHHh
Confidence                       2468889999             999999999999999999975321 111222211111110  0000


Q ss_pred             hhhc----------ccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          220 VSAN----------LLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       220 ~~~~----------~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ....          ...-...........++++.+++.+||+.||++|||+.|+
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~  312 (360)
T 3e3p_A          259 LNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEA  312 (360)
T ss_dssp             HCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             cccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHH
Confidence            0000          0000000001122357789999999999999999998764

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=100.00  E-value=1.9e-36  Score=254.23  Aligned_cols=204  Identities=20%  Similarity=0.264  Sum_probs=167.5

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCCCc------hHHHHHHHHHHHhhcC--CCcceeEeeEeecCCe
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGG------AFKNLDVECNMMKIIR--HQNLIKIISSCSKDDF  102 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~------~~~~~~~e~~~l~~~~--h~~i~~~~~~~~~~~~  102 (263)
                      .+|+..+.||+|+||.||+|. ..+++.||+|.+......      ....+.+|+.+++.++  |+|++++++++.+.+.
T Consensus        43 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~  122 (320)
T 3a99_A           43 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS  122 (320)
T ss_dssp             TTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred             CceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCc
Confidence            569999999999999999998 456899999999765321      2244567999999995  5999999999999999


Q ss_pred             eEEEEeccCC-CCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccc-cc---------------
Q 039276          103 KALILECMPH-GSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQ-IQ---------------  165 (263)
Q Consensus       103 ~~lv~e~~~~-~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~-~~---------------  165 (263)
                      .++++|++.+ ++|.+++..... +++..++.++.|++.||+|||+++++||||||+||+.+ ..               
T Consensus       123 ~~lv~e~~~~~~~L~~~l~~~~~-l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~  201 (320)
T 3a99_A          123 FVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK  201 (320)
T ss_dssp             EEEEEECCSSEEEHHHHHHHHCS-CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred             EEEEEEcCCCCccHHHHHhccCC-CCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCccccccc
Confidence            9999999975 899999986544 89999999999999999999999999999999999965 21               


Q ss_pred             ------ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccc
Q 039276          166 ------TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLS  226 (263)
Q Consensus       166 ------~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (263)
                            ..|++.|+||             |||||||++|||++|+.||....       .            ......  
T Consensus       202 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-------~------------~~~~~~--  260 (320)
T 3a99_A          202 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------E------------IIRGQV--  260 (320)
T ss_dssp             SSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------H------------HHHCCC--
T ss_pred             cccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh-------h------------hhcccc--
Confidence                  2478889999             99999999999999999985320       0            000000  


Q ss_pred             cccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          227 REDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       227 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                            ..+..+++++.+++.+||+.||++|||++||
T Consensus       261 ------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l  291 (320)
T 3a99_A          261 ------FFRQRVSSECQHLIRWCLALRPSDRPTFEEI  291 (320)
T ss_dssp             ------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             ------cccccCCHHHHHHHHHHccCChhhCcCHHHH
Confidence                  1123456679999999999999999999864

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=100.00  E-value=1.9e-35  Score=250.88  Aligned_cols=229  Identities=18%  Similarity=0.199  Sum_probs=167.6

Q ss_pred             ccccccceecccCceEEEEEEec-CC-ceEEEEEeecCCCchHHHHHHHHHHHhhcCCCc------ceeEeeEeecCCee
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ-DG-MEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQN------LIKIISSCSKDDFK  103 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~-~~-~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~------i~~~~~~~~~~~~~  103 (263)
                      .+|+..+.||+|+||.||+|... ++ ..||+|++... ......+.+|+.+++.++|++      ++.+.+++...+..
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~   97 (355)
T 2eu9_A           19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHM   97 (355)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEE
T ss_pred             ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeE
Confidence            46999999999999999999853 34 68999998754 234566778999999887655      89999999999999


Q ss_pred             EEEEeccCCCCHhhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc------------------
Q 039276          104 ALILECMPHGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI------------------  164 (263)
Q Consensus       104 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~------------------  164 (263)
                      +++||++ ++++.+++.... ..+++..++.++.|++.||+|||+++++||||||+||+...                  
T Consensus        98 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~  176 (355)
T 2eu9_A           98 CIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSV  176 (355)
T ss_dssp             EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEE
T ss_pred             EEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeccccccccccccccccccc
Confidence            9999999 557777776543 34899999999999999999999999999999999999721                  


Q ss_pred             ---------------------cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhc
Q 039276          165 ---------------------QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDL  211 (263)
Q Consensus       165 ---------------------~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~  211 (263)
                                           ...||+.|+||            |||||||++|||++|+.||......+ .+.......
T Consensus       177 ~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~~~~~~  255 (355)
T 2eu9_A          177 KNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE-HLVMMEKIL  255 (355)
T ss_dssp             SCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHH
T ss_pred             CCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHc
Confidence                                 12578889999            99999999999999999997432111 111111110


Q ss_pred             CC--Cchhhhh----------------------hhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          212 LP--NSVMKVV----------------------SANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       212 ~~--~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .+  .......                      ..................+.++.+++.+||+.||++|||++|+
T Consensus       256 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~  331 (355)
T 2eu9_A          256 GPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEA  331 (355)
T ss_dssp             CCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred             CCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHH
Confidence            00  0000000                      0000000011112234557789999999999999999999764

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=100.00  E-value=9.9e-36  Score=249.18  Aligned_cols=215  Identities=14%  Similarity=0.132  Sum_probs=157.3

Q ss_pred             cccccccceecccCceEEEEEEe-cCCceEEEEEeecCCCc-h-HHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           31 LFLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGG-A-FKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~-~-~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      ..+|+..+.||+|+||.||+|.. .+++.||+|++...... . ...+.++..+++.++|+||+++++++.+.+..+++|
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~  103 (318)
T 2dyl_A           24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM  103 (318)
T ss_dssp             GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence            35699999999999999999995 46899999999866332 2 233344555778889999999999999999999999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccC-CccccccCCCccccccc---------------------
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFG-HSTHLLLKEDQSLTQIQ---------------------  165 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~h~dlk~~nil~~~~---------------------  165 (263)
                      ||+ ++.+..+.......+++..++.++.|++.||+|||.+ +++|+||+|+||+.+..                     
T Consensus       104 e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~  182 (318)
T 2dyl_A          104 ELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKD  182 (318)
T ss_dssp             CCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC----------
T ss_pred             ecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCcccc
Confidence            999 5466666554344589999999999999999999995 99999999999995432                     


Q ss_pred             -ccccccccCc-----------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccc
Q 039276          166 -TLATISYMAP-----------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSR  227 (263)
Q Consensus       166 -~~g~~~y~aP-----------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (263)
                       ..|++.|+||                 |||||||++|||++|+.||.........+.......                
T Consensus       183 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~----------------  246 (318)
T 2dyl_A          183 RSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEE----------------  246 (318)
T ss_dssp             ----CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSC----------------
T ss_pred             ccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccC----------------
Confidence             2468889998                 999999999999999999864322111111111110                


Q ss_pred             ccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          228 EDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       228 ~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                       ....+....+++++.+++.+||+.||.+|||+++|
T Consensus       247 -~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l  281 (318)
T 2dyl_A          247 -PPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKL  281 (318)
T ss_dssp             -CCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHH
T ss_pred             -CCCCCccCCCCHHHHHHHHHHccCChhHCcCHHHH
Confidence             00011123456679999999999999999998764

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=100.00  E-value=1.7e-35  Score=260.78  Aligned_cols=214  Identities=18%  Similarity=0.186  Sum_probs=167.1

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCC-CcceeEeeEeecCCeeEEEEec
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRH-QNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h-~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      .+|+..+.||+|+||.||+|. ..+++.||||++......  ..+..|+++++.++| +++..+..++.+....+++|||
T Consensus         7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~   84 (483)
T 3sv0_A            7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDL   84 (483)
T ss_dssp             TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS--CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred             CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc--HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEEC
Confidence            469999999999999999999 466899999998765332  346789999999976 5555666666777889999999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccc---c----------------------
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQ---I----------------------  164 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~---~----------------------  164 (263)
                      + +++|.+++......+++..++.++.||+.||+|||.++|+||||||+||++.   .                      
T Consensus        85 ~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~  163 (483)
T 3sv0_A           85 L-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQ  163 (483)
T ss_dssp             C-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCC
T ss_pred             C-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCcccc
Confidence            9 8899999986555699999999999999999999999999999999999962   1                      


Q ss_pred             --------cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCc--hhhhHhhhcCCCchhhhhhh
Q 039276          165 --------QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEM--TLKHWVNDLLPNSVMKVVSA  222 (263)
Q Consensus       165 --------~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  222 (263)
                              ...||+.|+||            |||||||++|||++|+.||........  .+..+..            .
T Consensus       164 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~------------~  231 (483)
T 3sv0_A          164 HIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISE------------K  231 (483)
T ss_dssp             BCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHH------------H
T ss_pred             ccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhh------------c
Confidence                    22478889999            999999999999999999975433211  1111111            0


Q ss_pred             cccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          223 NLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .....   .......+++++.+++..||+.+|++||++++|
T Consensus       232 ~~~~~---~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el  269 (483)
T 3sv0_A          232 KVATS---IEALCRGYPTEFASYFHYCRSLRFDDKPDYSYL  269 (483)
T ss_dssp             HHHSC---HHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHH
T ss_pred             ccccc---HHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHH
Confidence            00000   000123456789999999999999999998764

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=100.00  E-value=9.3e-36  Score=268.99  Aligned_cols=228  Identities=20%  Similarity=0.225  Sum_probs=168.2

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecC-CCchHHHHHHHHHHHhhcCCCcceeEeeEeec------CCee
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQ-YGGAFKNLDVECNMMKIIRHQNLIKIISSCSK------DDFK  103 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~------~~~~  103 (263)
                      ++|+..+.||+|+||.||+|.. .+++.||+|++... .......+.+|+++++.++||||+++++++..      .+..
T Consensus        14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~   93 (676)
T 3qa8_A           14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP   93 (676)
T ss_dssp             ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred             CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence            5699999999999999999984 56899999998765 33446678899999999999999999998755      5678


Q ss_pred             EEEEeccCCCCHhhhhhhCCC--cccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc----------------
Q 039276          104 ALILECMPHGSLGKCLSTSNY--ILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ----------------  165 (263)
Q Consensus       104 ~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~----------------  165 (263)
                      ++||||+++++|.+++.....  .+++..++.++.|++.||+|||+.+++|+||||+||+.+..                
T Consensus        94 ~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~  173 (676)
T 3qa8_A           94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKE  173 (676)
T ss_dssp             CCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCB
T ss_pred             EEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEcccccccc
Confidence            999999999999999986432  37888899999999999999999999999999999996521                


Q ss_pred             ---------ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCch-----hhh
Q 039276          166 ---------TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSV-----MKV  219 (263)
Q Consensus       166 ---------~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~-----~~~  219 (263)
                               ..|++.|+||            |||||||++|+|++|..||....    ....|.........     ...
T Consensus       174 ~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~----~~~~~~~~i~~~~~~~~~~~~~  249 (676)
T 3qa8_A          174 LDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNW----QPVQWHGKVREKSNEHIVVYDD  249 (676)
T ss_dssp             TTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSC----HHHHSSTTCC------CCSCCC
T ss_pred             cccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCccc----chhhhhhhhhcccchhhhhhhh
Confidence                     2468889999            99999999999999999986421    11111100000000     000


Q ss_pred             hhhcc--cccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          220 VSANL--LSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       220 ~~~~~--~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .....  ....+........+++.+.+++.+||..||++|||++|+
T Consensus       250 l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el  295 (676)
T 3qa8_A          250 LTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN  295 (676)
T ss_dssp             CSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred             hccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence            00000  000011112345678889999999999999999999874

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=100.00  E-value=1.2e-34  Score=248.94  Aligned_cols=163  Identities=18%  Similarity=0.249  Sum_probs=138.8

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCCCchHHHHHHHHHHHhhcC-CC-----cceeEeeEeecCCeeE
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIR-HQ-----NLIKIISSCSKDDFKA  104 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~-h~-----~i~~~~~~~~~~~~~~  104 (263)
                      .+|+..+.||+|+||.||+|.. .+++.||||++... .........|+.+++.++ |+     +++++.+++...+..+
T Consensus        54 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  132 (382)
T 2vx3_A           54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLC  132 (382)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEE
T ss_pred             eeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceE
Confidence            5799999999999999999984 46889999999754 233456677888888774 44     4999999999999999


Q ss_pred             EEEeccCCCCHhhhhhhCC-CcccHHHHHHHHHHHHHHHHHhc--cCCccccccCCCcccccc-----------------
Q 039276          105 LILECMPHGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLH--FGHSTHLLLKEDQSLTQI-----------------  164 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH--~~~i~h~dlk~~nil~~~-----------------  164 (263)
                      +|||++.+ +|.+++.... ..+++..+..++.|++.||+|||  ..+|+||||||+||++..                 
T Consensus       133 lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~  211 (382)
T 2vx3_A          133 LVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL  211 (382)
T ss_dssp             EEEECCCC-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEET
T ss_pred             EEEecCCC-CHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCceec
Confidence            99999965 9999998654 34889999999999999999999  579999999999999732                 


Q ss_pred             -----cccccccccCc------------chhhHHHHHHHHHhCCCCCcc
Q 039276          165 -----QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIK  196 (263)
Q Consensus       165 -----~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~  196 (263)
                           ...||+.|+||            |||||||++|||++|+.||..
T Consensus       212 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~  260 (382)
T 2vx3_A          212 GQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSG  260 (382)
T ss_dssp             TCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence                 12578889999            999999999999999999974

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=100.00  E-value=2.4e-34  Score=264.01  Aligned_cols=200  Identities=19%  Similarity=0.203  Sum_probs=161.6

Q ss_pred             ccccccceecccCceEEEEEEec--CCceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCe-----e
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ--DGMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDF-----K  103 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~--~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~-----~  103 (263)
                      .+|+..+.||+|+||.||++...  +++.||||.+.... ......+.+|+++++.++||||+++++++...+.     .
T Consensus        80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~  159 (681)
T 2pzi_A           80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG  159 (681)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred             CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence            56999999999999999999954  58999999987543 2345567889999999999999999999976554     6


Q ss_pred             EEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc------------------c
Q 039276          104 ALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI------------------Q  165 (263)
Q Consensus       104 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~------------------~  165 (263)
                      |+||||+++++|.+++..   .+++..++.++.|++.||+|||+++|+||||||+||+++.                  .
T Consensus       160 ~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~~~kl~DFG~a~~~~~~~~  236 (681)
T 2pzi_A          160 YIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEEQLKLIDLGAVSRINSFGY  236 (681)
T ss_dssp             EEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSCEEECCCTTCEETTCCSC
T ss_pred             EEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCCcEEEEecccchhcccCCc
Confidence            999999999999988754   3899999999999999999999999999999999999543                  2


Q ss_pred             ccccccccCc-----------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccc
Q 039276          166 TLATISYMAP-----------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT  234 (263)
Q Consensus       166 ~~g~~~y~aP-----------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (263)
                      ..||+.|+||           |||||||++++|++|..||........          +            .     ...
T Consensus       237 ~~gt~~y~aPE~~~~~~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~----------~------------~-----~~~  289 (681)
T 2pzi_A          237 LYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTRNGRYVDGL----------P------------E-----DDP  289 (681)
T ss_dssp             CCCCTTTSCTTHHHHCSCHHHHHHHHHHHHHHHHSCCCEETTEECSSC----------C------------T-----TCH
T ss_pred             cCCCccccCHHHHcCCCCCceehhhhHHHHHHHHhCCCCCcccccccc----------c------------c-----ccc
Confidence            3589999999           999999999999999988753211100          0            0     001


Q ss_pred             hHHHHHHHHHhhccccccCcCCCCCcc
Q 039276          235 KEQCMSFVFNLAMECTVESPNQRINAK  261 (263)
Q Consensus       235 ~~~~~~~l~~l~~~cl~~~p~~Rpt~~  261 (263)
                      ...+++.+.+++.+||+.||++||+..
T Consensus       290 ~~~~~~~l~~li~~~l~~dP~~R~~~~  316 (681)
T 2pzi_A          290 VLKTYDSYGRLLRRAIDPDPRQRFTTA  316 (681)
T ss_dssp             HHHHCHHHHHHHHHHTCSSGGGSCSSH
T ss_pred             ccccCHHHHHHHhhhccCChhhCCCHH
Confidence            223456789999999999999999764

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.97  E-value=7.4e-33  Score=233.83  Aligned_cols=206  Identities=15%  Similarity=0.113  Sum_probs=153.0

Q ss_pred             ccccccceecccCceEEEEEEecCCceEEEEEeecCC--------CchHHHHHHHHHHHhhcC---------CCcceeEe
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQY--------GGAFKNLDVECNMMKIIR---------HQNLIKII   94 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~--------~~~~~~~~~e~~~l~~~~---------h~~i~~~~   94 (263)
                      .+|+..+.||+|+||.||+|+. +++.||||++....        ....+.+.+|+.+++.++         |+|++++.
T Consensus        20 ~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~   98 (336)
T 2vuw_A           20 EKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN   98 (336)
T ss_dssp             HHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred             ccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence            5699999999999999999987 58999999997652        223477888999988885         66666655


Q ss_pred             eE-----------------eec-------------CCeeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHH
Q 039276           95 SS-----------------CSK-------------DDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEY  144 (263)
Q Consensus        95 ~~-----------------~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~  144 (263)
                      +.                 +.+             ....|+||||+++|++.+.+..  ..+++..++.++.|++.||+|
T Consensus        99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL~~  176 (336)
T 2vuw_A           99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTASLAV  176 (336)
T ss_dssp             EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHHHHH
T ss_pred             ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHHHHH
Confidence            54                 332             6789999999999977666644  237999999999999999999


Q ss_pred             hc-cCCccccccCCCcccccccc--------------------------------------cccccccCc----------
Q 039276          145 LH-FGHSTHLLLKEDQSLTQIQT--------------------------------------LATISYMAP----------  175 (263)
Q Consensus       145 lH-~~~i~h~dlk~~nil~~~~~--------------------------------------~g~~~y~aP----------  175 (263)
                      || +++|+||||||+||++....                                      .||+.|+||          
T Consensus       177 lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~~~~gt~~y~aPE~~~g~~~~~  256 (336)
T 2vuw_A          177 AEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSMDEDLFTGDGDYQ  256 (336)
T ss_dssp             HHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETTEEECCCCTTCSGGGCCCSSHH
T ss_pred             HHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCCcEEEeecccChhhhcCCCccc
Confidence            99 99999999999999976531                                      478899999          


Q ss_pred             -chhhHHHH-HHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccC
Q 039276          176 -DTYNFGIM-IMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVES  253 (263)
Q Consensus       176 -Dv~SlG~i-l~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~  253 (263)
                       ||||||++ .+++++|..||....        |...    ....+... .........+....+++++.+|+.+||+.|
T Consensus       257 ~Diwsl~~~~~~~~~~g~~p~~~~~--------~~~~----~~~~~~~~-~~~~~~~~~~~~~~~s~~~~dli~~~L~~d  323 (336)
T 2vuw_A          257 FDIYRLMKKENNNRWGEYHPYSNVL--------WLHY----LTDKMLKQ-MTFKTKCNTPAMKQIKRKIQEFHRTMLNFS  323 (336)
T ss_dssp             HHHHHHHHHHHTTCTTSCCTHHHHH--------HHHH----HHHHHHHT-CCCSSCCCSHHHHHHHHHHHHHHHHGGGSS
T ss_pred             eehhhhhCCCCcccccccCCCcchh--------hhhH----HHHhhhhh-hccCcccchhhhhhcCHHHHHHHHHHhccC
Confidence             99998777 777888999975310        0000    00000100 000111111235678999999999999977

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.97  E-value=4e-32  Score=235.59  Aligned_cols=203  Identities=14%  Similarity=0.119  Sum_probs=147.0

Q ss_pred             cccccceecccCceEEEEEE-ecCCceEEEEEeecCCC---chHHHHHHHHHHHhhcCC-Cccee---------------
Q 039276           33 LFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYG---GAFKNLDVECNMMKIIRH-QNLIK---------------   92 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~---~~~~~~~~e~~~l~~~~h-~~i~~---------------   92 (263)
                      .|...+.||+|+||.||+|. ..+++.||||++.....   ...+.+.+|+.+++.+.| ++...               
T Consensus        79 ~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  158 (413)
T 3dzo_A           79 TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVK  158 (413)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEE
T ss_pred             eEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcc
Confidence            38888999999999999999 55799999999974422   235678899999999876 22111               


Q ss_pred             ------EeeEeec-----CCeeEEEEeccCCCCHhhhhh------hCCCcccHHHHHHHHHHHHHHHHHhccCCcccccc
Q 039276           93 ------IISSCSK-----DDFKALILECMPHGSLGKCLS------TSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLL  155 (263)
Q Consensus        93 ------~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~------~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dl  155 (263)
                            +...+..     ....+++|+.+ +++|.+++.      .....+++..+..++.|++.||+|||+++++||||
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDi  237 (413)
T 3dzo_A          159 DPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYL  237 (413)
T ss_dssp             CCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             cCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCc
Confidence                  1111111     12346677655 679999884      22333778889999999999999999999999999


Q ss_pred             CCCccccccc--------------------ccccccccCc----------------------chhhHHHHHHHHHhCCCC
Q 039276          156 KEDQSLTQIQ--------------------TLATISYMAP----------------------DTYNFGIMIMETFSGKKP  193 (263)
Q Consensus       156 k~~nil~~~~--------------------~~g~~~y~aP----------------------Dv~SlG~il~ell~g~~P  193 (263)
                      ||+||+++..                    ..| +.|+||                      |||||||++|||++|+.|
T Consensus       238 Kp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~P  316 (413)
T 3dzo_A          238 RPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLP  316 (413)
T ss_dssp             CGGGEEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCC
T ss_pred             ccceEEEecCCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCC
Confidence            9999995432                    245 788886                      999999999999999999


Q ss_pred             CccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccC
Q 039276          194 TIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKE  262 (263)
Q Consensus       194 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~e  262 (263)
                      |........             ...+    ..        ....+++++.+++.+||+.||++|||+.+
T Consensus       317 f~~~~~~~~-------------~~~~----~~--------~~~~~~~~~~~li~~~l~~dP~~Rpt~~~  360 (413)
T 3dzo_A          317 NTDDAALGG-------------SEWI----FR--------SCKNIPQPVRALLEGFLRYPKEDRLLPLQ  360 (413)
T ss_dssp             CCTTGGGSC-------------SGGG----GS--------SCCCCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             CCCcchhhh-------------HHHH----Hh--------hcccCCHHHHHHHHHHccCChhhCcCHHH
Confidence            864311100             0000    00        01234567999999999999999999865

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.92  E-value=7.8e-26  Score=202.98  Aligned_cols=149  Identities=11%  Similarity=-0.003  Sum_probs=105.9

Q ss_pred             cccCceEEEEEE-ecCCceEEEEEeecCC----------CchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCeeEEEEe
Q 039276           41 SRGGFGSIYKAK-IQDGMEVVVKGFNLQY----------GGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        41 g~g~~g~v~~~~-~~~~~~v~vK~~~~~~----------~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      +.|+.|....++ ...|..+++|.+....          ....+.+.+|+++|+++ .|+||+++++++++.+..|||||
T Consensus       243 ~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVME  322 (569)
T 4azs_A          243 YAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVME  322 (569)
T ss_dssp             C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEEE
T ss_pred             ccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEEe
Confidence            445555444444 3447889999997652          12345688999999999 79999999999999999999999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc----------------------
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT----------------------  166 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~----------------------  166 (263)
                      |++|++|.+++...+. ++..   +|+.||+.||+|+|.+||+||||||+|||++.++                      
T Consensus       323 yv~G~~L~d~i~~~~~-l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~~~~t  398 (569)
T 4azs_A          323 KLPGRLLSDMLAAGEE-IDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSWPTN  398 (569)
T ss_dssp             CCCSEEHHHHHHTTCC-CCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---CCSHH
T ss_pred             cCCCCcHHHHHHhCCC-CCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCeeCCCCCccccC
Confidence            9999999999987654 5543   4789999999999999999999999999964332                      


Q ss_pred             -cccccccCc-----------chhhHHHHHHHHHhCCCC
Q 039276          167 -LATISYMAP-----------DTYNFGIMIMETFSGKKP  193 (263)
Q Consensus       167 -~g~~~y~aP-----------Dv~SlG~il~ell~g~~P  193 (263)
                       .||+.|+||           |+||+|++++++.++..|
T Consensus       399 ~vGTp~YmAPE~l~g~~~~~~d~~s~g~~~~~l~~~~~~  437 (569)
T 4azs_A          399 LVQSFFVFVNELFAENKSWNGFWRSAPVHPFNLPQPWSN  437 (569)
T ss_dssp             HHHHHHHHHHHHC-----------------CCCCTTHHH
T ss_pred             ceechhhccHHHhCCCCCCcccccccccchhhhccccch
Confidence             456777777           777777776666555444

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.86  E-value=7.6e-22  Score=176.14  Aligned_cols=150  Identities=13%  Similarity=0.110  Sum_probs=112.8

Q ss_pred             cccceecccCceEEEEEEecCCceEEEEEeecCCCc--------hHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEE
Q 039276           35 SESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGG--------AFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALI  106 (263)
Q Consensus        35 ~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~--------~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv  106 (263)
                      ...+.||+|+||.||++... +..+++|........        ..+++.+|+++++.++|+||+++..++.+.+..+++
T Consensus       339 ~~~~~LG~G~fg~Vy~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV  417 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRDSYL-DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM  417 (540)
T ss_dssp             ---------CCEEEEEEECS-SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred             CCCCEEeeCCCEEEEEEEEC-CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence            34678999999999999654 788899987544211        134578999999999999999555555566677999


Q ss_pred             EeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc----------------------
Q 039276          107 LECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI----------------------  164 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~----------------------  164 (263)
                      |||+++++|.+++..         +..++.|++.||+|||+++++||||||+||+.+.                      
T Consensus       418 mE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~~~kL~DFGla~~~~~~~~~~~~  488 (540)
T 3en9_A          418 MSYINGKLAKDVIED---------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDKDLYIIDFGLGKISNLDEDKAVD  488 (540)
T ss_dssp             EECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESSSEEECCCTTCEECCCHHHHHHH
T ss_pred             EECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECCeEEEEECccCEECCCccccccc
Confidence            999999999999976         4579999999999999999999999999998432                      


Q ss_pred             ------cccccccccCc--------------chhhHHHHHHHHHhCCCCC
Q 039276          165 ------QTLATISYMAP--------------DTYNFGIMIMETFSGKKPT  194 (263)
Q Consensus       165 ------~~~g~~~y~aP--------------Dv~SlG~il~ell~g~~Pf  194 (263)
                            ...||+.|+||              |+||..+-..+.+.++.+|
T Consensus       489 ~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          489 LIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             HHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             hhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence                  23578899999              6777776666666666554

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.77  E-value=4.9e-19  Score=145.59  Aligned_cols=118  Identities=13%  Similarity=0.095  Sum_probs=94.0

Q ss_pred             ccccceecccCceEEEEEEecCCceEEEEEeecCCC------------------chHHHHHHHHHHHhhcCCCcceeEee
Q 039276           34 FSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYG------------------GAFKNLDVECNMMKIIRHQNLIKIIS   95 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~------------------~~~~~~~~e~~~l~~~~h~~i~~~~~   95 (263)
                      |...+.||+|+||.||+|...+++.||+|.+.....                  .....+.+|+++++.++|   +++.+
T Consensus        92 ~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~---~~v~~  168 (282)
T 1zar_A           92 DAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG---LAVPK  168 (282)
T ss_dssp             SEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT---SSSCC
T ss_pred             EEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccC---CCcCe
Confidence            445599999999999999987799999999964321                  134567899999999984   55555


Q ss_pred             EeecCCeeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccc
Q 039276           96 SCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQ  163 (263)
Q Consensus        96 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~  163 (263)
                      .+.. +..++||||+++++|.+ +..     .  ....++.|++.||+|||.++++||||||+||+.+
T Consensus       169 ~~~~-~~~~lvmE~~~g~~L~~-l~~-----~--~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~  227 (282)
T 1zar_A          169 VYAW-EGNAVLMELIDAKELYR-VRV-----E--NPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS  227 (282)
T ss_dssp             EEEE-ETTEEEEECCCCEEGGG-CCC-----S--CHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE
T ss_pred             EEec-cceEEEEEecCCCcHHH-cch-----h--hHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE
Confidence            4433 45699999999999998 422     1  2346999999999999999999999999999987

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.69  E-value=2e-17  Score=134.31  Aligned_cols=123  Identities=18%  Similarity=0.128  Sum_probs=93.2

Q ss_pred             ccccceecccCceEEEEEEe-cCCce--EEEEEeecCCCc------------------------hHHHHHHHHHHHhhcC
Q 039276           34 FSESNLISRGGFGSIYKAKI-QDGME--VVVKGFNLQYGG------------------------AFKNLDVECNMMKIIR   86 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~-~~~~~--v~vK~~~~~~~~------------------------~~~~~~~e~~~l~~~~   86 (263)
                      |...+.||+|+||.||+|.. .+|+.  ||||++......                        ....+.+|++.+..+.
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  128 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK  128 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence            67788999999999999996 67888  999987543111                        0125678999999998


Q ss_pred             CCcc--eeEeeEeecCCeeEEEEeccCC-C----CHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhc-cCCccccccCCC
Q 039276           87 HQNL--IKIISSCSKDDFKALILECMPH-G----SLGKCLSTSNYILDFFQRLHIMIDVASAVEYLH-FGHSTHLLLKED  158 (263)
Q Consensus        87 h~~i--~~~~~~~~~~~~~~lv~e~~~~-~----~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH-~~~i~h~dlk~~  158 (263)
                      |+++  +..+..    ...++||||+.+ |    +|.++...    .++..+..++.|++.+|.||| ..+++||||||+
T Consensus       129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~  200 (258)
T 1zth_A          129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRLYQEAELVHADLSEY  200 (258)
T ss_dssp             HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTT
T ss_pred             hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHH
Confidence            7754  334432    246899999942 3    66665432    233456789999999999999 999999999999


Q ss_pred             cccccc
Q 039276          159 QSLTQI  164 (263)
Q Consensus       159 nil~~~  164 (263)
                      ||+...
T Consensus       201 NILl~~  206 (258)
T 1zth_A          201 NIMYID  206 (258)
T ss_dssp             SEEESS
T ss_pred             HEEEcC
Confidence            999864

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.63  E-value=2.2e-16  Score=133.93  Aligned_cols=125  Identities=14%  Similarity=0.068  Sum_probs=88.1

Q ss_pred             cccccceecccCceEEEEEEecCCceEEEEEeecCC--------------CchHHH--------HHHHHHHHhhcCCCcc
Q 039276           33 LFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQY--------------GGAFKN--------LDVECNMMKIIRHQNL   90 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~--------------~~~~~~--------~~~e~~~l~~~~h~~i   90 (263)
                      .|...+.||+|++|.||+|...+|+.||||+++...              ......        ...|...+..+.+.++
T Consensus        96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv  175 (397)
T 4gyi_A           96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF  175 (397)
T ss_dssp             CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            388999999999999999998889999999875321              000111        1235566666644433


Q ss_pred             eeEeeEeecCCeeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccccc
Q 039276           91 IKIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQT  166 (263)
Q Consensus        91 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~~  166 (263)
                      ....-+...  ..++||||+++++|..+...     +  ....++.|++.+|.+||..|+|||||||.|||....+
T Consensus       176 ~vp~p~~~~--~~~LVME~i~G~~L~~l~~~-----~--~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dg  242 (397)
T 4gyi_A          176 PVPEPIAQS--RHTIVMSLVDALPMRQVSSV-----P--DPASLYADLIALILRLAKHGLIHGDFNEFNILIREEK  242 (397)
T ss_dssp             SCCCEEEEE--TTEEEEECCSCEEGGGCCCC-----S--CHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEE
T ss_pred             CCCeeeecc--CceEEEEecCCccHhhhccc-----H--HHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCC
Confidence            211111111  23799999999888765432     1  2245789999999999999999999999999987654

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.07  E-value=4.8e-10  Score=90.64  Aligned_cols=108  Identities=13%  Similarity=0.103  Sum_probs=82.6

Q ss_pred             cccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcC-CCcceeEeeEeecCCeeEEEEeccC
Q 039276           33 LFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIR-HQNLIKIISSCSKDDFKALILECMP  111 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~lv~e~~~  111 (263)
                      .|.....++.|+.+.||+.... +..+++|............+.+|+++++.+. +..+.+++++..+.+..|++||+++
T Consensus        15 ~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~   93 (263)
T 3tm0_A           15 KYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEAD   93 (263)
T ss_dssp             TSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCS
T ss_pred             cceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecC
Confidence            4776777788888999998755 6899999987532223345778999999884 6778899999888889999999999


Q ss_pred             CCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhcc
Q 039276          112 HGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHF  147 (263)
Q Consensus       112 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~  147 (263)
                      |.+|.+.....      .....++.++..+|..||.
T Consensus        94 G~~l~~~~~~~------~~~~~~~~~l~~~l~~LH~  123 (263)
T 3tm0_A           94 GVLCSEEYEDE------QSPEKIIELYAECIRLFHS  123 (263)
T ss_dssp             SEEHHHHCCTT------TCHHHHHHHHHHHHHHHHH
T ss_pred             CeehhhccCCc------ccHHHHHHHHHHHHHHHhC
Confidence            99988763211      1123577888999999997

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=98.80  E-value=2.1e-08  Score=80.48  Aligned_cols=97  Identities=16%  Similarity=0.092  Sum_probs=68.6

Q ss_pred             cccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCc--ceeEeeEeecCCeeEEEEeccCCCCHhhh
Q 039276           41 SRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQN--LIKIISSCSKDDFKALILECMPHGSLGKC  118 (263)
Q Consensus        41 g~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~  118 (263)
                      +.|..+.||+....+|..+++|.....   ....+..|+++++.+.+.+  +.+++.+..+.+..+++||+++|.++.  
T Consensus        29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~--  103 (264)
T 1nd4_A           29 IGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL--  103 (264)
T ss_dssp             CTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--
T ss_pred             cCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--
Confidence            355568999998766788999997644   2245677999888885434  556888887777889999999998884  


Q ss_pred             hhhCCCcccHHHHHHHHHHHHHHHHHhccCC
Q 039276          119 LSTSNYILDFFQRLHIMIDVASAVEYLHFGH  149 (263)
Q Consensus       119 l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~  149 (263)
                      ...    ...   ..++.+++..|..||...
T Consensus       104 ~~~----~~~---~~~~~~l~~~l~~lh~~~  127 (264)
T 1nd4_A          104 SSH----LAP---AEKVSIMADAMRRLHTLD  127 (264)
T ss_dssp             TSC----CCH---HHHHHHHHHHHHHHTTSC
T ss_pred             cCc----CCH---hHHHHHHHHHHHHHhCCC
Confidence            211    111   245667777778887643

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=98.70  E-value=5.6e-08  Score=82.11  Aligned_cols=110  Identities=13%  Similarity=0.109  Sum_probs=78.0

Q ss_pred             ccccceecccCceEEEEEEecCCceEEEEEee--cCC-CchHHHHHHHHHHHhhcC--CCcceeEeeEeecC---CeeEE
Q 039276           34 FSESNLISRGGFGSIYKAKIQDGMEVVVKGFN--LQY-GGAFKNLDVECNMMKIIR--HQNLIKIISSCSKD---DFKAL  105 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~--~~~-~~~~~~~~~e~~~l~~~~--h~~i~~~~~~~~~~---~~~~l  105 (263)
                      ....+.++.|.++.+|+.... +..+++|...  ... ......+.+|+++++.+.  +..+++++.++.+.   +..|+
T Consensus        40 ~~~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~  118 (359)
T 3dxp_A           40 PLSVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFY  118 (359)
T ss_dssp             CCEEEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEE
T ss_pred             CceEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEE
Confidence            344677899999999998765 4678888775  321 122345778999999886  45577888888765   45899


Q ss_pred             EEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhcc
Q 039276          106 ILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHF  147 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~  147 (263)
                      +||++++.++.+....   .++......++.+++..|+.||.
T Consensus       119 vme~v~G~~l~~~~~~---~l~~~~~~~~~~~l~~~La~LH~  157 (359)
T 3dxp_A          119 IMEFVSGRVLWDQSLP---GMSPAERTAIYDEMNRVIAAMHT  157 (359)
T ss_dssp             EEECCCCBCCCCTTCT---TCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEecCCeecCCCccc---cCCHHHHHHHHHHHHHHHHHHhC
Confidence            9999999877542211   25677778899999999999995

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=98.43  E-value=1.1e-06  Score=72.34  Aligned_cols=103  Identities=16%  Similarity=0.072  Sum_probs=68.5

Q ss_pred             ccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhc-CCCc--ceeEeeEeecCC---eeEEEEec
Q 039276           36 ESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKII-RHQN--LIKIISSCSKDD---FKALILEC  109 (263)
Q Consensus        36 ~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~-~h~~--i~~~~~~~~~~~---~~~lv~e~  109 (263)
                      ..+.++.|..+.+|+.    +..+++|.....  .....+..|+++++.+ .+..  +.+++......+   ..|+||++
T Consensus        24 ~i~~~~~G~~n~v~~v----~~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~   97 (304)
T 3sg8_A           24 TIEISGEGNDCIAYEI----NRDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTK   97 (304)
T ss_dssp             CCCEEEECSSEEEEES----TTSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEEC
T ss_pred             eeEecCCCCcceEEEE----CCEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcc
Confidence            3556889999999875    356888986432  3456788899999887 3333  344444433332   45899999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhcc
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHF  147 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~  147 (263)
                      ++|.++......   .++..++..++.+++..++.||.
T Consensus        98 i~G~~l~~~~~~---~l~~~~~~~~~~~l~~~la~LH~  132 (304)
T 3sg8_A           98 IKGVPLTPLLLN---NLPKQSQNQAAKDLARFLSELHS  132 (304)
T ss_dssp             CCCEECCHHHHH---TSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCeECCccccc---cCCHHHHHHHHHHHHHHHHHHHc
Confidence            999887653322   15666666777777777777774

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=97.91  E-value=0.00011  Score=59.08  Aligned_cols=99  Identities=17%  Similarity=0.090  Sum_probs=67.3

Q ss_pred             ecccCce-EEEEEEe-cCCceEEEEEeecCCCchHHHHHHHHHHHhhcC-CCcceeEeeEeecCCeeEEEEeccCCCCHh
Q 039276           40 ISRGGFG-SIYKAKI-QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIR-HQNLIKIISSCSKDDFKALILECMPHGSLG  116 (263)
Q Consensus        40 lg~g~~g-~v~~~~~-~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~  116 (263)
                      +..|..+ .||+... .++..+++|.-...   ....+..|.+.++.+. +-.+.+++.++.+.+..+++||++++.++.
T Consensus        32 ~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~  108 (272)
T 4gkh_A           32 DNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAF  108 (272)
T ss_dssp             EECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHH
T ss_pred             ccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcccc
Confidence            3445444 6888774 44678899986533   4556778999888773 444778888888888999999999998877


Q ss_pred             hhhhhCCCcccHHHHHHHHHHHHHHHHHhc
Q 039276          117 KCLSTSNYILDFFQRLHIMIDVASAVEYLH  146 (263)
Q Consensus       117 ~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH  146 (263)
                      +......     .....+..++...|.-||
T Consensus       109 ~~~~~~~-----~~~~~~~~~l~~~L~~Lh  133 (272)
T 4gkh_A          109 QVLEEYP-----DSGENIVDALAVFLRRLH  133 (272)
T ss_dssp             HHHHHCG-----GGHHHHHHHHHHHHHHHH
T ss_pred             ccccCCH-----HHHHHHHHHHHHHHHHhc
Confidence            6554321     112335556666666666

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=97.84  E-value=0.00014  Score=59.77  Aligned_cols=76  Identities=11%  Similarity=0.016  Sum_probs=54.3

Q ss_pred             ccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCC---cceeEeeEee-cCCeeEEEEeccC
Q 039276           36 ESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQ---NLIKIISSCS-KDDFKALILECMP  111 (263)
Q Consensus        36 ~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~---~i~~~~~~~~-~~~~~~lv~e~~~  111 (263)
                      ..+.++.|....+|+.    +..+++|...  .......+..|.++++.+.+.   .+.+++.+.. ..+..+++||+++
T Consensus        23 ~v~~l~~G~~n~v~~v----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~   96 (306)
T 3tdw_A           23 SVESLGEGFRNYAILV----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQ   96 (306)
T ss_dssp             CEEEEEECSSEEEEEE----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCC
T ss_pred             eeeecCCCcceeEEEE----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccC
Confidence            3556788888889887    5778888842  223456788899999998642   3556666653 4456789999999


Q ss_pred             CCCHhh
Q 039276          112 HGSLGK  117 (263)
Q Consensus       112 ~~~L~~  117 (263)
                      |.++..
T Consensus        97 G~~l~~  102 (306)
T 3tdw_A           97 GQILGE  102 (306)
T ss_dssp             SEECHH
T ss_pred             CeECch
Confidence            987765

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=97.52  E-value=0.00022  Score=59.75  Aligned_cols=81  Identities=6%  Similarity=-0.055  Sum_probs=54.8

Q ss_pred             cccee-cccCceEEEEEEec-------CCceEEEEEeecCC---CchHHHHHHHHHHHhhcC-C--CcceeEeeEeecC-
Q 039276           36 ESNLI-SRGGFGSIYKAKIQ-------DGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIR-H--QNLIKIISSCSKD-  100 (263)
Q Consensus        36 ~~~~l-g~g~~g~v~~~~~~-------~~~~v~vK~~~~~~---~~~~~~~~~e~~~l~~~~-h--~~i~~~~~~~~~~-  100 (263)
                      ..+.| +.|..+.+|+....       ++..+++|......   ......+..|+++++.+. +  ..+.+++.+..+. 
T Consensus        24 ~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~  103 (357)
T 3ats_A           24 VESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGD  103 (357)
T ss_dssp             EEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSST
T ss_pred             EEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCC
Confidence            35667 78888899987643       26678898765432   101245667888888774 2  3567778776554 


Q ss_pred             --CeeEEEEeccCCCCHh
Q 039276          101 --DFKALILECMPHGSLG  116 (263)
Q Consensus       101 --~~~~lv~e~~~~~~L~  116 (263)
                        +..+++||+++|.++.
T Consensus       104 ~~g~~~~v~e~l~G~~l~  121 (357)
T 3ats_A          104 VLGTPFFLMDYVEGVVPP  121 (357)
T ss_dssp             TTSSCEEEEECCCCBCCC
T ss_pred             ccCCceEEEEecCCCChh
Confidence              4578999999886654

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=97.49  E-value=0.0011  Score=56.33  Aligned_cols=76  Identities=11%  Similarity=0.126  Sum_probs=49.5

Q ss_pred             ccceecccCceEEEEEEec-CCceEEEEEeecCCC-------chHHHHHHHHHHHhhcCC--C-cceeEeeEeecCCeeE
Q 039276           36 ESNLISRGGFGSIYKAKIQ-DGMEVVVKGFNLQYG-------GAFKNLDVECNMMKIIRH--Q-NLIKIISSCSKDDFKA  104 (263)
Q Consensus        36 ~~~~lg~g~~g~v~~~~~~-~~~~v~vK~~~~~~~-------~~~~~~~~e~~~l~~~~h--~-~i~~~~~~~~~~~~~~  104 (263)
                      ..+.+|.|..+.||++... +++.+++|.......       ....+...|.++++.+..  + .+.+++.+  +.+..+
T Consensus        34 ~~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~  111 (397)
T 2olc_A           34 TCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAV  111 (397)
T ss_dssp             EEEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTE
T ss_pred             EEEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccE
Confidence            4667899999999999743 468899998653211       123456778888887732  2 34455544  334468


Q ss_pred             EEEeccCCC
Q 039276          105 LILECMPHG  113 (263)
Q Consensus       105 lv~e~~~~~  113 (263)
                      +|||++++.
T Consensus       112 lvmE~l~g~  120 (397)
T 2olc_A          112 TVMEDLSHL  120 (397)
T ss_dssp             EEECCCTTS
T ss_pred             EEEEeCCCc
Confidence            999999763

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=97.41  E-value=0.00074  Score=54.86  Aligned_cols=76  Identities=11%  Similarity=0.072  Sum_probs=55.7

Q ss_pred             ccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCC---cceeEeeEeecCCeeEEEEecc
Q 039276           34 FSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQ---NLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~---~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      ....+.+|.|..+.||+.+..+|+.+++|+...........+..|++.|+.+...   .+++++.+.    ..+++||++
T Consensus        17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l   92 (288)
T 3f7w_A           17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWV   92 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECC
T ss_pred             eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEee
Confidence            4456778999999999999889999999987655444445677899999888432   344555442    247899998


Q ss_pred             CCC
Q 039276          111 PHG  113 (263)
Q Consensus       111 ~~~  113 (263)
                      .++
T Consensus        93 ~~~   95 (288)
T 3f7w_A           93 DER   95 (288)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            764

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=96.65  E-value=0.015  Score=47.77  Aligned_cols=98  Identities=13%  Similarity=0.115  Sum_probs=73.6

Q ss_pred             ccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcC---CCcceeEeeEeecCCeeEEEEecc
Q 039276           34 FSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIR---HQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~---h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      ....+.++.|....+|+.... +..+++|.....   ....+..|.+.++.+.   ...+++++.+....+..+++||++
T Consensus        38 i~~~~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l  113 (312)
T 3jr1_A           38 IKHKEKLYSGEMNEIWLINDE-VQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEAL  113 (312)
T ss_dssp             CCEEEEECCSSSSEEEEEESS-SCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECC
T ss_pred             eeeeEEeCCccceeeeEEEEC-CCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEec
Confidence            344667899999999998754 678899987643   3566778988888873   356788888887778899999999


Q ss_pred             CCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCc
Q 039276          111 PHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHS  150 (263)
Q Consensus       111 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i  150 (263)
                      ++..+..               ....++...|+-||....
T Consensus       114 ~G~~~~~---------------~~~~~lG~~LA~LH~~~~  138 (312)
T 3jr1_A          114 NKSKNKQ---------------SSFTIFAEKIAQLHQIQG  138 (312)
T ss_dssp             CCCCCCT---------------THHHHHHHHHHHHHHCCC
T ss_pred             cCCCCCc---------------hhHHHHHHHHHHHHcCCC
Confidence            9865421               134578888999997653

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=96.50  E-value=0.02  Score=47.16  Aligned_cols=74  Identities=12%  Similarity=0.200  Sum_probs=41.8

Q ss_pred             cceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCC--CcceeEeeE------eecCCeeEEEEe
Q 039276           37 SNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRH--QNLIKIISS------CSKDDFKALILE  108 (263)
Q Consensus        37 ~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h--~~i~~~~~~------~~~~~~~~lv~e  108 (263)
                      .+.++.|..+.+|+....++ .+++|.....    ...+..|.++++.+..  -.+++++..      ....+..+++++
T Consensus        37 ~~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~  111 (346)
T 2q83_A           37 IDVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD  111 (346)
T ss_dssp             EEECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred             eeeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence            44565567789999876544 5899988752    2334445555555431  123333321      124567789999


Q ss_pred             ccCCCCH
Q 039276          109 CMPHGSL  115 (263)
Q Consensus       109 ~~~~~~L  115 (263)
                      +++|.++
T Consensus       112 ~i~G~~~  118 (346)
T 2q83_A          112 WIEGRPF  118 (346)
T ss_dssp             CCCCBCC
T ss_pred             eecCccC
Confidence            9988643

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=96.22  E-value=0.0066  Score=46.93  Aligned_cols=81  Identities=14%  Similarity=0.009  Sum_probs=51.9

Q ss_pred             CCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhcc-CCccccccCCCccccccccc----------ccccccCc------
Q 039276          113 GSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHF-GHSTHLLLKEDQSLTQIQTL----------ATISYMAP------  175 (263)
Q Consensus       113 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~-~~i~h~dlk~~nil~~~~~~----------g~~~y~aP------  175 (263)
                      -+|.+.++..+..+++.++|.++.|.+.+|.-+-. +.-..+-+.|..|++..++.          ....+.+|      
T Consensus        33 vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~~~s~~~~~~~~~pe~~~~~  112 (229)
T 2yle_A           33 LSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAPAADDAGEPPPVAGKLGYSQ  112 (229)
T ss_dssp             EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECCC------------CCSSSS
T ss_pred             ccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceecccccccccccCCCChhhcccc
Confidence            48999999888889999999999999999887611 11112233344444332211          11113333      


Q ss_pred             -----chhhHHHHHHHHHhCCCC
Q 039276          176 -----DTYNFGIMIMETFSGKKP  193 (263)
Q Consensus       176 -----Dv~SlG~il~ell~g~~P  193 (263)
                           -|||||+++|.-+-...|
T Consensus       113 ~te~~~IysLG~tLY~ALDygL~  135 (229)
T 2yle_A          113 CMETEVIESLGIIIYKALDYGLK  135 (229)
T ss_dssp             SCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             chHHHHHHHHHHHHHHHhhcCCC
Confidence                 799999999999986666

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=95.18  E-value=0.35  Score=41.17  Aligned_cols=74  Identities=5%  Similarity=-0.008  Sum_probs=44.7

Q ss_pred             ccceecccCceEEEEEEecCCceEEEEEeecC----CC--c---hHHHHHHHHHHHh-hcCCCcceeEeeEeecCCeeEE
Q 039276           36 ESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQ----YG--G---AFKNLDVECNMMK-IIRHQNLIKIISSCSKDDFKAL  105 (263)
Q Consensus        36 ~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~----~~--~---~~~~~~~e~~~l~-~~~h~~i~~~~~~~~~~~~~~l  105 (263)
                      ..+.+|.|..+.||+... ++..++||.....    ..  .   ....+..|+..+. ......+++++.+.  .+..++
T Consensus        38 ~i~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~l  114 (420)
T 2pyw_A           38 VIKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALI  114 (420)
T ss_dssp             EEEECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEE
T ss_pred             EEEEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEE
Confidence            356788999999999864 3678999954221    01  1   2223333433222 12234566777665  456789


Q ss_pred             EEecc-CC
Q 039276          106 ILECM-PH  112 (263)
Q Consensus       106 v~e~~-~~  112 (263)
                      |||++ ++
T Consensus       115 v~e~l~~g  122 (420)
T 2pyw_A          115 GMRYLEPP  122 (420)
T ss_dssp             EECCCCTT
T ss_pred             EEeecCCc
Confidence            99999 76

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=94.13  E-value=0.19  Score=40.64  Aligned_cols=71  Identities=6%  Similarity=0.004  Sum_probs=44.0

Q ss_pred             cceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcc-eeEeeEeecCCeeEEEEecc-CCCC
Q 039276           37 SNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNL-IKIISSCSKDDFKALILECM-PHGS  114 (263)
Q Consensus        37 ~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i-~~~~~~~~~~~~~~lv~e~~-~~~~  114 (263)
                      .+.++.|..+.+|+.     ..+++|+....... ......|+++++.+...++ .+++....+  .-++++|++ ++.+
T Consensus        23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~~~--~~~~v~e~i~~g~~   94 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVDPA--TGVMVTRYIAGAQT   94 (301)
T ss_dssp             CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEECTT--TCCEEEECCTTCEE
T ss_pred             eeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEECC--CCEEEEeecCCCcc
Confidence            677888999999988     56888887653211 1122457777777643233 455554332  347899999 6544


Q ss_pred             H
Q 039276          115 L  115 (263)
Q Consensus       115 L  115 (263)
                      +
T Consensus        95 l   95 (301)
T 3dxq_A           95 M   95 (301)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=91.25  E-value=1  Score=37.88  Aligned_cols=98  Identities=13%  Similarity=0.129  Sum_probs=55.5

Q ss_pred             cceecccCceEEEEEEec--------CCceEEEEEeecCCCchHHHHHHHHHHHhhcC-CCcceeEeeEeecCCeeEEEE
Q 039276           37 SNLISRGGFGSIYKAKIQ--------DGMEVVVKGFNLQYGGAFKNLDVECNMMKIIR-HQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        37 ~~~lg~g~~g~v~~~~~~--------~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      .+.+..|-...+|+....        ++..+++|+.... ......+.+|.++++.+. +.-..++++.+.+    .+|+
T Consensus        55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~  129 (379)
T 3feg_A           55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE  129 (379)
T ss_dssp             CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred             EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence            445667777889998754        2478999986332 223455668999888874 3223566666543    3899


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccC
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFG  148 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~  148 (263)
                      ||++|.++..--      +..   -.+..+++..|+-||..
T Consensus       130 e~i~G~~l~~~~------l~~---p~~~~~ia~~La~LH~~  161 (379)
T 3feg_A          130 QYIPSRPLKTQE------LRE---PVLSAAIATKMAQFHGM  161 (379)
T ss_dssp             ECCSEEECCGGG------GGC---HHHHHHHHHHHHHHHTC
T ss_pred             EEecCccCChhH------hCC---HHHHHHHHHHHHHHhCC
Confidence            999986554210      111   12345566667777743

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=88.66  E-value=3.1  Score=35.53  Aligned_cols=98  Identities=14%  Similarity=0.183  Sum_probs=61.3

Q ss_pred             cceecccCceEEEEEEecC--------CceEEEEEeecCCCchHHHHHHHHHHHhhcCCCc-ceeEeeEeecCCeeEEEE
Q 039276           37 SNLISRGGFGSIYKAKIQD--------GMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQN-LIKIISSCSKDDFKALIL  107 (263)
Q Consensus        37 ~~~lg~g~~g~v~~~~~~~--------~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~-i~~~~~~~~~~~~~~lv~  107 (263)
                      .+.++.|-...+|+....+        +..+++|+....  .....+..|..+++.+...+ .+++++.+.+    .+++
T Consensus        78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~  151 (429)
T 1nw1_A           78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE  151 (429)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred             EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence            4567788889999988542        478899987432  12245557888888874333 3566665532    3899


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCC
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGH  149 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~  149 (263)
                      ||+++.++...-      +..   ..++.+++..|+-||...
T Consensus       152 e~l~G~~l~~~~------l~~---~~~~~~ia~~La~LH~~~  184 (429)
T 1nw1_A          152 EYIPSRPLSCHE------ISL---AHMSTKIAKRVAKVHQLE  184 (429)
T ss_dssp             CCCCEEECCTTG------GGS---HHHHHHHHHHHHHHTTCC
T ss_pred             EEeCCcccChhh------cCC---HHHHHHHHHHHHHHhCCc
Confidence            999875543210      110   124567777788888643

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=87.02  E-value=2.1  Score=34.72  Aligned_cols=77  Identities=9%  Similarity=0.066  Sum_probs=48.5

Q ss_pred             cceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCc--ceeEeeE-----eecCCeeEEEEec
Q 039276           37 SNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQN--LIKIISS-----CSKDDFKALILEC  109 (263)
Q Consensus        37 ~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~--i~~~~~~-----~~~~~~~~lv~e~  109 (263)
                      ...++ |....+|+....+|..+++|...... .....+..|..+++.+...+  +++++..     ....+..++++++
T Consensus        31 ~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~  108 (328)
T 1zyl_A           31 LTPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPS  108 (328)
T ss_dssp             CEEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEEC
T ss_pred             EEeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEe
Confidence            34566 77788998776667789999986432 13445667887777764222  3444432     1123456789999


Q ss_pred             cCCCCH
Q 039276          110 MPHGSL  115 (263)
Q Consensus       110 ~~~~~L  115 (263)
                      ++|.++
T Consensus       109 i~G~~~  114 (328)
T 1zyl_A          109 VGGRQF  114 (328)
T ss_dssp             CCCEEC
T ss_pred             cCCCCC
Confidence            987543

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=84.62  E-value=8.5  Score=31.14  Aligned_cols=80  Identities=9%  Similarity=0.163  Sum_probs=41.7

Q ss_pred             cceecccCceE-EEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCC--CcceeEeeEeecCCeeEEEEeccCCC
Q 039276           37 SNLISRGGFGS-IYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRH--QNLIKIISSCSKDDFKALILECMPHG  113 (263)
Q Consensus        37 ~~~lg~g~~g~-v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h--~~i~~~~~~~~~~~~~~lv~e~~~~~  113 (263)
                      .+.++.|.... +|+....++..+++|.......   ..+..|+++++.+..  -.+.+++.+..+.+  +++||.+.+.
T Consensus        23 ~~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~   97 (333)
T 3csv_A           23 RTPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDA   97 (333)
T ss_dssp             ECC--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSC
T ss_pred             eeECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCc
Confidence            34555554444 5666543467788876544321   223346666666632  23556666543333  7899999877


Q ss_pred             CHhhhhhh
Q 039276          114 SLGKCLST  121 (263)
Q Consensus       114 ~L~~~l~~  121 (263)
                      ++.+++..
T Consensus        98 ~l~~~l~~  105 (333)
T 3csv_A           98 LFTEVINN  105 (333)
T ss_dssp             BHHHHHHH
T ss_pred             chHHHhcC
Confidence            77766543

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=84.15  E-value=4.8  Score=34.73  Aligned_cols=100  Identities=17%  Similarity=0.140  Sum_probs=61.9

Q ss_pred             cceecccCceEEEEEEecC-CceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcc-eeEeeEeecCCeeEEEEeccCCCC
Q 039276           37 SNLISRGGFGSIYKAKIQD-GMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNL-IKIISSCSKDDFKALILECMPHGS  114 (263)
Q Consensus        37 ~~~lg~g~~g~v~~~~~~~-~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i-~~~~~~~~~~~~~~lv~e~~~~~~  114 (263)
                      .+.|+.|-...+|+....+ +..+++|+....... .-....|..+++.+...++ .++++.+. +   ..++||+++.+
T Consensus       113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~-~idR~~E~~vl~~L~~~gl~P~ll~~~~-~---G~v~e~I~G~~  187 (458)
T 2qg7_A          113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE-IINREREKKISCILYNKNIAKKIYVFFT-N---GRIEEFMDGYA  187 (458)
T ss_dssp             EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCS-CSCHHHHHHHHHHHTTSSSBCCEEEEET-T---EEEEECCCSEE
T ss_pred             EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhh-hcCHHHHHHHHHHHHhcCCCCCEEEEeC-C---eEEEEeeCCcc
Confidence            4567778888999988654 478888887443211 1112468888888864444 46676652 2   36999998855


Q ss_pred             HhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCc
Q 039276          115 LGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHS  150 (263)
Q Consensus       115 L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i  150 (263)
                      +..    ..  +..   ..++.+++..|+-||....
T Consensus       188 l~~----~~--l~~---~~~~~~ia~~La~LH~~~~  214 (458)
T 2qg7_A          188 LSR----ED--IKN---PKFQKLIAKNLKLLHDIKL  214 (458)
T ss_dssp             CCT----TT--TTS---HHHHHHHHHHHHHHHTCCC
T ss_pred             CCh----hh--cCC---HHHHHHHHHHHHHHhcCCc
Confidence            532    11  111   2356788999999997654

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=83.04  E-value=2.8  Score=33.84  Aligned_cols=77  Identities=9%  Similarity=0.030  Sum_probs=44.3

Q ss_pred             ccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCc--ceeEeeEe------ecCCeeEEEE
Q 039276           36 ESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQN--LIKIISSC------SKDDFKALIL  107 (263)
Q Consensus        36 ~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~--i~~~~~~~------~~~~~~~lv~  107 (263)
                      ..+.++.|....+|+....++ .+++|......  ....+..|.+++..+...+  +.+++...      ...+..++++
T Consensus        26 ~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~  102 (322)
T 2ppq_A           26 SYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALI  102 (322)
T ss_dssp             EEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEE
T ss_pred             EeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEE
Confidence            355677788889999876645 78899887531  2234556777777663222  23333211      1235678999


Q ss_pred             eccCCCCH
Q 039276          108 ECMPHGSL  115 (263)
Q Consensus       108 e~~~~~~L  115 (263)
                      ++++|..+
T Consensus       103 ~~l~G~~~  110 (322)
T 2ppq_A          103 SFLEGMWL  110 (322)
T ss_dssp             ECCCCBCC
T ss_pred             EeCCCcCC
Confidence            99988653

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=81.63  E-value=5.8  Score=33.82  Aligned_cols=74  Identities=16%  Similarity=0.226  Sum_probs=46.8

Q ss_pred             cceecccCceEEEEEEecC--------CceEEEEEeecCCCchHHHHHHHHHHHhhcC-CCcceeEeeEeecCCeeEEEE
Q 039276           37 SNLISRGGFGSIYKAKIQD--------GMEVVVKGFNLQYGGAFKNLDVECNMMKIIR-HQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        37 ~~~lg~g~~g~v~~~~~~~--------~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      .+.+..|-...+|+....+        +..+++++..... .......+|.++++.+. +.-..++++.+  .  -+.|+
T Consensus        75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~I~  149 (424)
T 3mes_A           75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADF--P--EGRIE  149 (424)
T ss_dssp             EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEE
T ss_pred             EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCEEE
Confidence            4566677778899987552        5788988864432 11222346888888774 33345666533  2  27899


Q ss_pred             eccCCCCH
Q 039276          108 ECMPHGSL  115 (263)
Q Consensus       108 e~~~~~~L  115 (263)
                      ||++|.+|
T Consensus       150 efI~G~~l  157 (424)
T 3mes_A          150 EFIDGEPL  157 (424)
T ss_dssp             ECCCSEEC
T ss_pred             EEeCCccC
Confidence            99988654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	263
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	5e-27
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	2e-25
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	3e-25
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	4e-25
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	2e-23
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	2e-22
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	2e-22
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	2e-22
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	2e-22
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	2e-22
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	4e-22
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	7e-22
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	9e-22
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	1e-21
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	1e-21
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	3e-21
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	6e-21
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	8e-21
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	2e-20
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	3e-20
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	9e-20
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	1e-19
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	2e-19
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	2e-18
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	2e-18
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	6e-18
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	3e-17
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	4e-17
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	7e-17
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	8e-17
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	8e-17
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	1e-16
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	1e-16
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	4e-16
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	5e-16
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	1e-15
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	1e-15
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	3e-15
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	7e-15
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	1e-14
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-14
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	2e-14
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	2e-14
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	2e-14
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	4e-14
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	6e-14
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	9e-14
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	1e-13
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	3e-13
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	6e-13
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	2e-12
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-12
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	3e-12
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	3e-12
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	3e-12
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	2e-11
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	2e-11
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	1e-09
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	1e-09
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	7e-09
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	1e-07
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	2e-06
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	6e-06
d1ogqa_	313	c.10.2.8 (A:) Polygalacturonase inhibiting protein	8e-05

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  103 bits (258), Expect = 5e-27
 Identities = 46/265 (17%), Positives = 84/265 (31%), Gaps = 56/265 (21%)

Query: 38  NLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSC 97
             I  G FG++YK K    + V +           +    E  +++  RH N++  +   
Sbjct: 14  QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73

Query: 98  SKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLK- 156
           +     A++ +     SL   L       +  + + I    A  ++YLH     H  LK 
Sbjct: 74  TAPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKS 132

Query: 157 -----------------------EDQSLTQIQTLA-TISYMAP---------------DT 177
                                        Q + L+ +I +MAP               D 
Sbjct: 133 NNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDV 192

Query: 178 YNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQ 237
           Y FGI++ E  +G+ P     + +  +       L   + KV               +  
Sbjct: 193 YAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKV---------------RSN 237

Query: 238 CMSFVFNLAMECTVESPNQRINAKE 262
           C   +  L  EC  +  ++R    +
Sbjct: 238 CPKAMKRLMAECLKKKRDERPLFPQ 262

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 99.3 bits (247), Expect = 2e-25
 Identities = 41/263 (15%), Positives = 85/263 (32%), Gaps = 58/263 (22%)

Query: 38  NLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSC 97
             +  G FG ++        +V VK               E N+MK ++HQ L+++ +  
Sbjct: 19  ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVV 77

Query: 98  SKDDFKALILECMPHGSLGKCLSTSNYI-LDFFQRLHIMIDVASAVEYLHFGHSTHLLLK 156
           +++    +I E M +GSL   L T + I L   + L +   +A  + ++   +  H  L+
Sbjct: 78  TQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLR 136

Query: 157 ------------------------EDQSLTQIQTLATISYMAP------------DTYNF 180
                                   +++   +      I + AP            D ++F
Sbjct: 137 AANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 196

Query: 181 GIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMS 240
           GI++ E  +  +           +++                          +  + C  
Sbjct: 197 GILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM-------------------VRPDNCPE 237

Query: 241 FVFNLAMECTVESPNQRINAKEM 263
            ++ L   C  E P  R     +
Sbjct: 238 ELYQLMRLCWKERPEDRPTFDYL 260

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.6 bits (245), Expect = 3e-25
 Identities = 44/266 (16%), Positives = 80/266 (30%), Gaps = 56/266 (21%)

Query: 34  FSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKI 93
            +    I  G FG ++     +  +V +K          ++   E  +M  + H  L+++
Sbjct: 7   LTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQL 65

Query: 94  ISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHL 153
              C +     L+ E M HG L   L T   +      L + +DV   + YL      H 
Sbjct: 66  YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHR 125

Query: 154 LLK------------------------EDQSLTQIQTLATISYMAP------------DT 177
            L                         +DQ  +   T   + + +P            D 
Sbjct: 126 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 185

Query: 178 YNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQ 237
           ++FG+++ E FS  K      +   +    V D+                          
Sbjct: 186 WSFGVLMWEVFSEGKI----PYENRSNSEVVEDI---------------STGFRLYKPRL 226

Query: 238 CMSFVFNLAMECTVESPNQRINAKEM 263
             + V+ +   C  E P  R     +
Sbjct: 227 ASTHVYQIMNHCWKERPEDRPAFSRL 252

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.2 bits (244), Expect = 4e-25
 Identities = 46/266 (17%), Positives = 86/266 (32%), Gaps = 56/266 (21%)

Query: 34  FSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKI 93
            +    +  G FG +   K +   +V +K               E  +M  + H+ L+++
Sbjct: 6   LTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQL 64

Query: 94  ISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHL 153
              C+K     +I E M +G L   L    +     Q L +  DV  A+EYL      H 
Sbjct: 65  YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHR 124

Query: 154 LLK------------------------EDQSLTQIQTLATISYMAP------------DT 177
            L                         +D+  + + +   + +  P            D 
Sbjct: 125 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDI 184

Query: 178 YNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQ 237
           + FG+++ E +S  K   + F    T +H    L                   H  +++ 
Sbjct: 185 WAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRL--------------YRPHLASEK- 229

Query: 238 CMSFVFNLAMECTVESPNQRINAKEM 263
               V+ +   C  E  ++R   K +
Sbjct: 230 ----VYTIMYSCWHEKADERPTFKIL 251

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.7 bits (235), Expect = 2e-23
 Identities = 42/302 (13%), Positives = 96/302 (31%), Gaps = 66/302 (21%)

Query: 21  LDLSNNNFSGLFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKN-LDVE 78
           ++L +++F       + + +  G  G ++K      G+ +  K  +L+   A +N +  E
Sbjct: 1   MELKDDDFE------KISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRE 54

Query: 79  CNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDV 138
             ++       ++    +   D   ++ +E M  GSL + L  +   +       + I V
Sbjct: 55  LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAV 113

Query: 139 ASAVEYLHFGHSTH--------LLLKEDQSL-------------TQIQTLA-TISYMAP- 175
              + YL   H           +L+     +             +   +   T SYM+P 
Sbjct: 114 IKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPE 173

Query: 176 -----------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANL 224
                      D ++ G+ ++E   G+ P       E+ L          +         
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTP 233

Query: 225 LSREDEHFMTKEQCMSF-----------------------VFNLAMECTVESPNQRINAK 261
                 + M     M+                          +   +C +++P +R + K
Sbjct: 234 GRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLK 293

Query: 262 EM 263
           ++
Sbjct: 294 QL 295

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.8 bits (227), Expect = 2e-22
 Identities = 51/281 (18%), Positives = 97/281 (34%), Gaps = 62/281 (22%)

Query: 40  ISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSK 99
           I +G FG +++ K   G EV VK F+ +   ++   + E     ++RH+N++  I++ +K
Sbjct: 11  IGKGRFGEVWRGK-WRGEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIAADNK 68

Query: 100 DDFKA----LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFG------- 148
           D+       L+ +   HGSL   L  + Y +     + + +  AS + +LH         
Sbjct: 69  DNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 126

Query: 149 --------HSTHLLLKED--------------------QSLTQIQTLATISYMAP----- 175
                    S ++L+K++                      +     + T  YMAP     
Sbjct: 127 PAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDD 186

Query: 176 -------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVN-DLLPNSVMKVVS 221
                        D Y  G++  E              ++     V  D     + KVV 
Sbjct: 187 SINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVC 246

Query: 222 ANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKE 262
              L     +     + +  +  +  EC   +   R+ A  
Sbjct: 247 EQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALR 287

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 92.8 bits (230), Expect = 2e-22
 Identities = 43/262 (16%), Positives = 84/262 (32%), Gaps = 54/262 (20%)

Query: 39  LISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSC 97
            +  G FG +++      G     K     +    + +  E   M ++RH  L+ +  + 
Sbjct: 33  ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF 92

Query: 98  SKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLK- 156
             D+   +I E M  G L + ++  +  +   + +  M  V   + ++H  +  HL LK 
Sbjct: 93  EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKP 152

Query: 157 -----------------------EDQSLTQIQTLATISYMAP------------DTYNFG 181
                                   D   +   T  T  + AP            D ++ G
Sbjct: 153 ENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVG 212

Query: 182 IMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSF 241
           ++     SG  P    F GE   +         ++  V S +    +       E    F
Sbjct: 213 VLSYILLSGLSP----FGGENDDE---------TLRNVKSCDWNMDDSAFSGISEDGKDF 259

Query: 242 VFNLAMECTVESPNQRINAKEM 263
           +     +  +  PN R+   + 
Sbjct: 260 I----RKLLLADPNTRMTIHQA 277

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 92.4 bits (229), Expect = 2e-22
 Identities = 45/262 (17%), Positives = 80/262 (30%), Gaps = 54/262 (20%)

Query: 39  LISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSC 97
            +  G FG +++      G   V K  N  Y      +  E ++M  + H  LI +  + 
Sbjct: 36  ELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAF 95

Query: 98  SKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTH----- 152
                  LILE +  G L   ++  +Y +   + ++ M      ++++H     H     
Sbjct: 96  EDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKP 155

Query: 153 -------------------LLLKEDQSLTQIQTLATISYMAP------------DTYNFG 181
                              L  K +       T AT  + AP            D +  G
Sbjct: 156 ENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIG 215

Query: 182 IMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSF 241
           ++     SG  P    F GE  L+             V   +    ED       +   F
Sbjct: 216 VLGYVLLSGLSP----FAGEDDLETL---------QNVKRCDWEFDEDAFSSVSPEAKDF 262

Query: 242 VFNLAMECTVESPNQRINAKEM 263
           +         + P +R+   + 
Sbjct: 263 I----KNLLQKEPRKRLTVHDA 280

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.8 bits (225), Expect = 2e-22
 Identities = 49/260 (18%), Positives = 86/260 (33%), Gaps = 56/260 (21%)

Query: 38  NLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSC 97
             I +G FG +       G +V VK          +    E ++M  +RH NL++++   
Sbjct: 13  QTIGKGEFGDVMLGD-YRGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVI 69

Query: 98  SKDDFK-ALILECMPHGSLGKCL-STSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLL 155
            ++     ++ E M  GSL   L S    +L     L   +DV  A+EYL   +  H  L
Sbjct: 70  VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDL 129

Query: 156 KEDQSL--------------------TQIQTLATISYMAP------------DTYNFGIM 183
                L                    TQ      + + AP            D ++FGI+
Sbjct: 130 AARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGIL 189

Query: 184 IMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVF 243
           + E +S  +      +  + LK  V  +                +       + C   V+
Sbjct: 190 LWEIYSFGRV----PYPRIPLKDVVPRV---------------EKGYKMDAPDGCPPAVY 230

Query: 244 NLAMECTVESPNQRINAKEM 263
            +   C       R +  ++
Sbjct: 231 EVMKNCWHLDAAMRPSFLQL 250

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 91.6 bits (227), Expect = 2e-22
 Identities = 40/269 (14%), Positives = 84/269 (31%), Gaps = 58/269 (21%)

Query: 33  LFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNL---QYGGAFKNLDVECNMMKIIRHQ 88
           LFS+   I  G FG++Y A+ +++   V +K  +    Q    ++++  E   ++ +RH 
Sbjct: 16  LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHP 75

Query: 89  NLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFG 148
           N I+      ++    L++E     +           L   +   +       + YLH  
Sbjct: 76  NTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKP-LQEVEIAAVTHGALQGLAYLHSH 134

Query: 149 HSTHLLLKEDQSL-------------------TQIQTLATISYMAP-------------- 175
           +  H  +K    L                        + T  +MAP              
Sbjct: 135 NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGK 194

Query: 176 -DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT 234
            D ++ GI  +E    K P          +    +               +++ +   + 
Sbjct: 195 VDVWSLGITCIELAERKPP----LFNMNAMSALYH---------------IAQNESPALQ 235

Query: 235 KEQCMSFVFNLAMECTVESPNQRINAKEM 263
                 +  N    C  + P  R  ++ +
Sbjct: 236 SGHWSEYFRNFVDSCLQKIPQDRPTSEVL 264

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.5 bits (224), Expect = 4e-22
 Identities = 38/267 (14%), Positives = 82/267 (30%), Gaps = 58/267 (21%)

Query: 34  FSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKI 93
                 + +G FG ++         V +K          +    E  +MK +RH+ L+++
Sbjct: 19  LRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQL 77

Query: 94  ISSCSKDDFKALILECMPHGSLGK-CLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTH 152
            +  S++    ++ E M  GSL       +   L   Q + +   +AS + Y+   +  H
Sbjct: 78  YAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 136

Query: 153 LLLK------------------------EDQSLTQIQTLATISYMAP------------D 176
             L+                        +++   +      I + AP            D
Sbjct: 137 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 196

Query: 177 TYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKE 236
            ++FGI++ E  +  +           L                                
Sbjct: 197 VWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC-------------------PP 237

Query: 237 QCMSFVFNLAMECTVESPNQRINAKEM 263
           +C   + +L  +C  + P +R   + +
Sbjct: 238 ECPESLHDLMCQCWRKEPEERPTFEYL 264

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.7 bits (222), Expect = 7e-22
 Identities = 42/265 (15%), Positives = 84/265 (31%), Gaps = 59/265 (22%)

Query: 38  NLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYG-GAFKNLDVECNMMKIIRHQNLIKIIS 95
             +  G +G +  A        V VK  +++      +N+  E  + K++ H+N++K   
Sbjct: 11  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 70

Query: 96  SCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLL 155
              + + + L LE    G L   +   +  +           + + V YLH    TH  +
Sbjct: 71  HRREGNIQYLFLEYCSGGELFDRIE-PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 129

Query: 156 K-------------------------EDQSLTQIQTLATISYMAP-------------DT 177
           K                          ++     +   T+ Y+AP             D 
Sbjct: 130 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 189

Query: 178 YNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQ 237
           ++ GI++    +G+ P  +          W       +  K + +  L            
Sbjct: 190 WSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL------------ 237

Query: 238 CMSFVFNLAMECTVESPNQRINAKE 262
                  L  +  VE+P+ RI   +
Sbjct: 238 ------ALLHKILVENPSARITIPD 256

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.5 bits (221), Expect = 9e-22
 Identities = 49/273 (17%), Positives = 92/273 (33%), Gaps = 63/273 (23%)

Query: 34  FSESNLISRGGFGSIYKAKIQDG-----MEVVVKGFNLQYG-GAFKNLDVECNMMKIIRH 87
            +   +I  G FG +YK  ++       + V +K     Y      +   E  +M    H
Sbjct: 9   VTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSH 68

Query: 88  QNLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHF 147
            N+I++    SK     +I E M +G+L K L   +      Q + ++  +A+ ++YL  
Sbjct: 69  HNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLAN 128

Query: 148 GHSTHLLLK--------------------------EDQSLTQIQTLATISYMAP------ 175
            +  H  L                            + + T       I + AP      
Sbjct: 129 MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYR 188

Query: 176 ------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSRED 229
                 D ++FGI++ E  +  +                 +L  + VMK +       + 
Sbjct: 189 KFTSASDVWSFGIVMWEVMTYGER-------------PYWELSNHEVMKAI------NDG 229

Query: 230 EHFMTKEQCMSFVFNLAMECTVESPNQRINAKE 262
               T   C S ++ L M+C  +   +R    +
Sbjct: 230 FRLPTPMDCPSAIYQLMMQCWQQERARRPKFAD 262

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.7 bits (222), Expect = 1e-21
 Identities = 47/265 (17%), Positives = 96/265 (36%), Gaps = 62/265 (23%)

Query: 38  NLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISS 96
             I +G  G++Y A  +  G EV ++  NLQ     + +  E  +M+  ++ N++  + S
Sbjct: 26  EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85

Query: 97  CSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLH---------- 146
               D   +++E +  GSL   +  +   +D  Q   +  +   A+E+LH          
Sbjct: 86  YLVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIK 143

Query: 147 ----------------FGHSTHLLLKEDQSLTQIQTLATISYMAP------------DTY 178
                           FG    +  ++ +  T + T     +MAP            D +
Sbjct: 144 SDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPY---WMAPEVVTRKAYGPKVDIW 200

Query: 179 NFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQC 238
           + GIM +E   G+ P    +  E  L+          +  + +      ++   ++    
Sbjct: 201 SLGIMAIEMIEGEPP----YLNENPLRA---------LYLIATNGTPELQNPEKLSAI-- 245

Query: 239 MSFVFNLAMECTVESPNQRINAKEM 263
                +    C      +R +AKE+
Sbjct: 246 ---FRDFLNRCLDMDVEKRGSAKEL 267

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.9 bits (220), Expect = 1e-21
 Identities = 40/266 (15%), Positives = 85/266 (31%), Gaps = 61/266 (22%)

Query: 40  ISRGGFGSIYKAK-IQDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISS 96
           I RG F ++YK    +  +EV       +       +    E  M+K ++H N+++   S
Sbjct: 17  IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDS 76

Query: 97  C----SKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTH 152
                       L+ E M  G+L   L     ++           +   +++LH      
Sbjct: 77  WESTVKGKKCIVLVTELMTSGTLKTYLK-RFKVMKIKVLRSWCRQILKGLQFLHTRTPPI 135

Query: 153 ----------LLLKEDQSL-------------TQIQTLA-TISYMAP-----------DT 177
                      +     S+             +  + +  T  +MAP           D 
Sbjct: 136 IHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEEKYDESVDV 195

Query: 178 YNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQ 237
           Y FG+ ++E  + + P  +  +     +   + + P S  KV    +             
Sbjct: 196 YAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVK------------ 243

Query: 238 CMSFVFNLAMECTVESPNQRINAKEM 263
                  +   C  ++ ++R + K++
Sbjct: 244 ------EIIEGCIRQNKDERYSIKDL 263

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 88.7 bits (219), Expect = 3e-21
 Identities = 46/297 (15%), Positives = 95/297 (31%), Gaps = 67/297 (22%)

Query: 14  DLTSLKSLDLSNNNFSGLFLFSE---SNLISRGGFGSIYKAKI----QDGMEVVVKGFNL 66
           D  + +  + +   F+     S      +I  G FG +    +    +  + V +K    
Sbjct: 5   DPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKS 64

Query: 67  QYG-GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYI 125
            Y     ++   E ++M    H N+I +    +K     +I E M +GSL   L  ++  
Sbjct: 65  GYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ 124

Query: 126 LDFFQRLHIMIDVASAVEYLHFGHSTHLLLK----------------------------E 157
               Q + ++  +A+ ++YL   +  H  L                             +
Sbjct: 125 FTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSD 184

Query: 158 DQSLTQIQTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLK 205
               + +     I + AP            D +++GI++ E  S  +             
Sbjct: 185 PTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGER------------ 232

Query: 206 HWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKE 262
               D+    V+  +       +D        C S +  L ++C  +  N R    +
Sbjct: 233 -PYWDMTNQDVINAI------EQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQ 282

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.0 bits (215), Expect = 6e-21
 Identities = 50/267 (18%), Positives = 91/267 (34%), Gaps = 59/267 (22%)

Query: 34  FSESNLISRGGFGSIYKAK-IQDGMEVVVKGFN---LQYGGAFKNLDVECNMMKIIRHQN 89
           F     + +G FG++Y A+  Q    + +K      L+  G    L  E  +   +RH N
Sbjct: 8   FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 67

Query: 90  LIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGH 149
           ++++           LILE  P G++ + L   +   D  +    + ++A+A+ Y H   
Sbjct: 68  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKR 126

Query: 150 STHLLLK---------------------EDQSLTQIQTLATISYMAP------------D 176
             H  +K                        S  +     T+ Y+ P            D
Sbjct: 127 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 186

Query: 177 TYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKE 236
            ++ G++  E   GK P    F                   K +S    +  D  F+T+ 
Sbjct: 187 LWSLGVLCYEFLVGKPP----FEANT----------YQETYKRISRVEFTFPD--FVTEG 230

Query: 237 QCMSFVFNLAMECTVESPNQRINAKEM 263
                  +L       +P+QR   +E+
Sbjct: 231 -----ARDLISRLLKHNPSQRPMLREV 252

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.0 bits (215), Expect = 8e-21
 Identities = 38/267 (14%), Positives = 87/267 (32%), Gaps = 59/267 (22%)

Query: 38  NLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISS 96
             +  G FG +YKA+  +  +    K  + +     ++  VE +++    H N++K++ +
Sbjct: 18  GELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 77

Query: 97  CSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLK 156
              ++   +++E    G++   +      L   Q   +      A+ YLH     H  LK
Sbjct: 78  FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLK 137

Query: 157 ----------------------EDQSLTQIQTLA-TISYMAP-----------------D 176
                                   +++ +  +   T  +MAP                 D
Sbjct: 138 AGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKAD 197

Query: 177 TYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKE 236
            ++ GI ++E    + P     H    ++              V   +   E        
Sbjct: 198 VWSLGITLIEMAEIEPP----HHELNPMR--------------VLLKIAKSEPPTLAQPS 239

Query: 237 QCMSFVFNLAMECTVESPNQRINAKEM 263
           +  S   +   +C  ++ + R    ++
Sbjct: 240 RWSSNFKDFLKKCLEKNVDARWTTSQL 266

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.9 bits (212), Expect = 2e-20
 Identities = 44/270 (16%), Positives = 85/270 (31%), Gaps = 64/270 (23%)

Query: 36  ESNLISRGGFGSIYKAKIQD---GMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNL 90
           E   +  G FG++ K   Q       V VK    +         L  E N+M+ + +  +
Sbjct: 11  EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 70

Query: 91  IKIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHS 150
           +++I  C  + +  L++E    G L K L   N  +     + ++  V+  ++YL   + 
Sbjct: 71  VRMIGICEAESW-MLVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLEESNF 128

Query: 151 THLLLK--------------------------EDQSLTQIQTLATISYMAP--------- 175
            H  L                           E+    Q      + + AP         
Sbjct: 129 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 188

Query: 176 ---DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHF 232
              D ++FG+++ E FS  +     + G             + V  ++       + E  
Sbjct: 189 SKSDVWSFGVLMWEAFSYGQK---PYRGMK----------GSEVTAML------EKGERM 229

Query: 233 MTKEQCMSFVFNLAMECTVESPNQRINAKE 262
                C   +++L   C       R     
Sbjct: 230 GCPAGCPREMYDLMNLCWTYDVENRPGFAA 259

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 85.5 bits (211), Expect = 3e-20
 Identities = 47/268 (17%), Positives = 94/268 (35%), Gaps = 58/268 (21%)

Query: 34  FSESNLISRGGFGSIYKAKIQD-GMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIK 92
            +  + +  G +G +Y+   +   + V VK          +    E  +MK I+H NL++
Sbjct: 19  ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQ 77

Query: 93  IISSCSKDDFKALILECMPHGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHST 151
           ++  C+++    +I E M +G+L   L   N   +     L++   ++SA+EYL   +  
Sbjct: 78  LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFI 137

Query: 152 HLLLK------------------------EDQSLTQIQTLATISYMAPDT---------- 177
           H  L                          D           I + AP++          
Sbjct: 138 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 197

Query: 178 --YNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTK 235
             + FG+++ E  +        + G             + V +++       +D      
Sbjct: 198 DVWAFGVLLWEIATYGMS---PYPGID----------LSQVYELL------EKDYRMERP 238

Query: 236 EQCMSFVFNLAMECTVESPNQRINAKEM 263
           E C   V+ L   C   +P+ R +  E+
Sbjct: 239 EGCPEKVYELMRACWQWNPSDRPSFAEI 266

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.4 bits (208), Expect = 9e-20
 Identities = 41/272 (15%), Positives = 84/272 (30%), Gaps = 64/272 (23%)

Query: 37  SNLISRGGFGSIYKAKIQD----GMEVVVKGFNLQYG-GAFKNLDVECNMMKIIRHQNLI 91
           + +I RG FG +Y   + D     +   VK  N     G       E  +MK   H N++
Sbjct: 32  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91

Query: 92  KIISSCSKDDFKA-LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHS 150
            ++  C + +    ++L  M HG L   +    +       +   + VA  +++L     
Sbjct: 92  SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKF 151

Query: 151 THLLLKEDQSL---------------------------TQIQTLATISYMAP-------- 175
            H  L     +                            +      + +MA         
Sbjct: 152 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 211

Query: 176 ----DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEH 231
               D ++FG+++ E  +   P     + ++        LL               +   
Sbjct: 212 TTKSDVWSFGVLLWELMTRGAP----PYPDVNTFDITVYLL---------------QGRR 252

Query: 232 FMTKEQCMSFVFNLAMECTVESPNQRINAKEM 263
            +  E C   ++ + ++C       R +  E+
Sbjct: 253 LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 284

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.7 bits (206), Expect = 1e-19
 Identities = 48/269 (17%), Positives = 79/269 (29%), Gaps = 64/269 (23%)

Query: 40  ISRGGFGSIYKAKI----QDGMEVVVKGFNLQY---GGAFKNLDVECNMMKIIRHQNLIK 92
           +  G FG + + +        + V VK           A  +   E N M  + H+NLI+
Sbjct: 16  LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75

Query: 93  IISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLH------ 146
           +         K ++ E  P GSL   L                + VA  + YL       
Sbjct: 76  LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 134

Query: 147 --------------------FGHSTHLLLKEDQSLTQIQTLATISYMAP----------- 175
                               FG    L   +D  + Q       ++ AP           
Sbjct: 135 RDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHA 194

Query: 176 -DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT 234
            DT+ FG+ + E F+  +      +G   L                      +E E    
Sbjct: 195 SDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKID------------------KEGERLPR 236

Query: 235 KEQCMSFVFNLAMECTVESPNQRINAKEM 263
            E C   ++N+ ++C    P  R     +
Sbjct: 237 PEDCPQDIYNVMVQCWAHKPEDRPTFVAL 265

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.6 bits (206), Expect = 2e-19
 Identities = 39/286 (13%), Positives = 82/286 (28%), Gaps = 67/286 (23%)

Query: 19  KSLDLSNNNFSGLFLFSESNLISRGGFGSIYKAKIQ---DGMEVVVKGFNLQYG-GAFKN 74
           K L L  +N            +  G FGS+ +   +     ++V +K           + 
Sbjct: 1   KKLFLKRDNLL-----IADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEE 55

Query: 75  LDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHI 134
           +  E  +M  + +  ++++I  C  +    L++E    G L K L      +       +
Sbjct: 56  MMREAQIMHQLDNPYIVRLIGVCQAEAL-MLVMEMAGGGPLHKFLVGKREEIPVSNVAEL 114

Query: 135 MIDVASAVEYLH--------------------------FGHSTHLLLKEDQSLTQIQTLA 168
           +  V+  ++YL                           FG S  L   +     +     
Sbjct: 115 LHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKW 174

Query: 169 TISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSV 216
            + + AP            D +++G+ + E  S  +   K   G   +            
Sbjct: 175 PLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRME-- 232

Query: 217 MKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKE 262
                               +C   ++ L  +C +     R +   
Sbjct: 233 -----------------CPPECPPELYALMSDCWIYKWEDRPDFLT 261

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 80.8 bits (199), Expect = 2e-18
 Identities = 41/264 (15%), Positives = 81/264 (30%), Gaps = 57/264 (21%)

Query: 38  NLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYG-GAFKNLDVECNMMKIIRHQNLIKIIS 95
           +++  G F  +  A+  +    V +K    +   G   +++ E  ++  I+H N++ +  
Sbjct: 15  DVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDD 74

Query: 96  SCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLL 155
                    LI++ +  G L   +    +         ++  V  AV+YLH     H  L
Sbjct: 75  IYESGGHLYLIMQLVSGGELFDRIVEKGF-YTERDASRLIFQVLDAVKYLHDLGIVHRDL 133

Query: 156 K-------------------------EDQSLTQIQTLATISYMAP------------DTY 178
           K                         ED          T  Y+AP            D +
Sbjct: 134 KPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCW 193

Query: 179 NFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQC 238
           + G++      G  P    F+ E   K +   L           + +S   + F+     
Sbjct: 194 SIGVIAYILLCGYPP----FYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRH--- 246

Query: 239 MSFVFNLAMECTVESPNQRINAKE 262
                        + P +R   ++
Sbjct: 247 ----------LMEKDPEKRFTCEQ 260

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.0 bits (199), Expect = 2e-18
 Identities = 43/291 (14%), Positives = 82/291 (28%), Gaps = 80/291 (27%)

Query: 34  FSESNLISRGGFGSIYKA------KIQDGMEVVVKGFNLQYG-GAFKNLDVECNMM-KII 85
            S    +  G FG + +A      K    M V VK           + L  E  ++  + 
Sbjct: 25  LSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG 84

Query: 86  RHQNLIKIISSCSKDDFKALILECMPHGSLGKCL-----------------STSNYILDF 128
            H N++ ++ +C+      +I E   +G L   L                       LD 
Sbjct: 85  NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 144

Query: 129 FQRLHIMIDVASAVEYLHFGHSTHLLLK-------------------------EDQSLTQ 163
              L     VA  + +L   +  H  L                          +   + +
Sbjct: 145 EDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 204

Query: 164 IQTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDL 211
                 + +MAP            D +++GI + E FS           +      +   
Sbjct: 205 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI--- 261

Query: 212 LPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKE 262
                          +E    ++ E   + ++++   C    P +R   K+
Sbjct: 262 ---------------KEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQ 297

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.4 bits (195), Expect = 6e-18
 Identities = 38/273 (13%), Positives = 86/273 (31%), Gaps = 63/273 (23%)

Query: 34  FSESNLISRGGFGSIYKAKIQD-----GMEVVVKGFNL-QYGGAFKNLDVECNMMKIIRH 87
           F +  ++  G FG++YK           + V +K         A K +  E  +M  + +
Sbjct: 11  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70

Query: 88  QNLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHF 147
            ++ +++  C     + LI + MP G L   +      +     L+  + +A  + YL  
Sbjct: 71  PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 129

Query: 148 GHSTHLLLK-------------------------EDQSLTQIQTLATISYMAPD------ 176
               H  L                          E++          I +MA +      
Sbjct: 130 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 189

Query: 177 ------TYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDE 230
                  +++G+ + E  +        + G             + +  ++       + E
Sbjct: 190 YTHQSDVWSYGVTVWELMTFGSK---PYDGIP----------ASEISSIL------EKGE 230

Query: 231 HFMTKEQCMSFVFNLAMECTVESPNQRINAKEM 263
                  C   V+ + ++C +   + R   +E+
Sbjct: 231 RLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 263

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.7 bits (188), Expect = 3e-17
 Identities = 39/266 (14%), Positives = 77/266 (28%), Gaps = 61/266 (22%)

Query: 39  LISRGGFGSIYKAKI----QDGMEVVVKGFNLQYGGAF-KNLDVECNMMKIIRHQNLIKI 93
            I  G FG +++          + V +K        +  +    E   M+   H +++K+
Sbjct: 14  CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 73

Query: 94  ISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHL 153
           I   + ++   +I+E    G L   L    Y LD    +     +++A+ YL      H 
Sbjct: 74  IGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHR 132

Query: 154 LLK------------------------EDQSLTQIQTLATISYMAP------------DT 177
            +                         +       +    I +MAP            D 
Sbjct: 133 DIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDV 192

Query: 178 YNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQ 237
           + FG+ + E         +       +    N                    E       
Sbjct: 193 WMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN-------------------GERLPMPPN 233

Query: 238 CMSFVFNLAMECTVESPNQRINAKEM 263
           C   +++L  +C    P++R    E+
Sbjct: 234 CPPTLYSLMTKCWAYDPSRRPRFTEL 259

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.0 bits (189), Expect = 4e-17
 Identities = 41/262 (15%), Positives = 88/262 (33%), Gaps = 55/262 (20%)

Query: 39  LISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSC 97
            + RG FG +++          + K   ++ G     +  E +++ I RH+N++ +  S 
Sbjct: 12  DLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESF 70

Query: 98  SKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKE 157
              +   +I E +    + + ++TS + L+  + +  +  V  A+++LH  +  H  ++ 
Sbjct: 71  ESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRP 130

Query: 158 DQSL------------------------TQIQTLATISYMAP------------DTYNFG 181
           +  +                                  Y AP            D ++ G
Sbjct: 131 ENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLG 190

Query: 182 IMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSF 241
            ++    SG  P    F  E              +  +++A     E+       + M F
Sbjct: 191 TLVYVLLSGINP----FLAETN---------QQIIENIMNAEYTFDEEAFKEISIEAMDF 237

Query: 242 VFNLAMECTVESPNQRINAKEM 263
           V        V+    R+ A E 
Sbjct: 238 V----DRLLVKERKSRMTASEA 255

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.2 bits (187), Expect = 7e-17
 Identities = 39/271 (14%), Positives = 81/271 (29%), Gaps = 63/271 (23%)

Query: 34  FSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYG---GAFKNLDVECNMMKIIRHQN 89
           F    ++  G F ++  A+ +    E  +K    ++         +  E ++M  + H  
Sbjct: 10  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 69

Query: 90  LIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGH 149
            +K+  +   D+     L    +G L K +       D         ++ SA+EYLH   
Sbjct: 70  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTAEIVSALEYLHGKG 128

Query: 150 STHLLLK------------------------EDQSLTQIQTLATIS-YMAP--------- 175
             H  LK                         +    +  +    + Y++P         
Sbjct: 129 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSAC 188

Query: 176 ---DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHF 232
              D +  G +I +  +G  P    F                +   +    +       +
Sbjct: 189 KSSDLWALGCIIYQLVAGLPP----FRAG-------------NEYLIFQKII----KLEY 227

Query: 233 MTKEQCMSFVFNLAMECTVESPNQRINAKEM 263
              E+      +L  +  V    +R+  +EM
Sbjct: 228 DFPEKFFPKARDLVEKLLVLDATKRLGCEEM 258

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 75.9 bits (186), Expect = 8e-17
 Identities = 34/272 (12%), Positives = 83/272 (30%), Gaps = 65/272 (23%)

Query: 39  LISRGGFGSIYKAK-IQDGMEVVVKGFNLQYG---GAFKNLDVECNMMKIIRHQNLIKII 94
           ++  GG   ++ A+ ++   +V VK            +     E      + H  ++ + 
Sbjct: 14  ILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 73

Query: 95  SSCSKDDFKA----LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYL----- 145
            +   +        +++E +   +L   + T    +   + + ++ D   A+ +      
Sbjct: 74  DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP-MTPKRAIEVIADACQALNFSHQNGI 132

Query: 146 ---------------------HFGHSTHLLLKEDQSLTQIQTLATISYMAP--------- 175
                                 FG +  +    +        + T  Y++P         
Sbjct: 133 IHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVD 192

Query: 176 ---DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHF 232
              D Y+ G ++ E  +G+ P    F G+  +      +  + +        LS + +  
Sbjct: 193 ARSDVYSLGCVLYEVLTGEPP----FTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAV 248

Query: 233 MTKEQCMSFVFNLAMECTVESPNQRI-NAKEM 263
           + K                ++P  R   A EM
Sbjct: 249 VLK-------------ALAKNPENRYQTAAEM 267

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 76.0 bits (186), Expect = 8e-17
 Identities = 53/314 (16%), Positives = 93/314 (29%), Gaps = 92/314 (29%)

Query: 17  SLKSLDLSNNNFSGLFLFSESNLISRGGFGSIYKAK------IQDGMEVVVKGFNLQYGG 70
            L SL+   NN   +        I  G FG +++A+       +    V VK    +   
Sbjct: 4   KLLSLEYPRNNIEYV------RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASA 57

Query: 71  AF-KNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCL---------- 119
               +   E  +M    + N++K++  C+      L+ E M +G L + L          
Sbjct: 58  DMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCS 117

Query: 120 -------------STSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLK---------- 156
                        S     L   ++L I   VA+ + YL      H  L           
Sbjct: 118 LSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENM 177

Query: 157 ---------------EDQSLTQIQTLATISYMAP------------DTYNFGIMIMETFS 189
                           D           I +M P            D + +G+++ E FS
Sbjct: 178 VVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 237

Query: 190 GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMEC 249
                   ++G               +  V   N+L+  +        C   ++NL   C
Sbjct: 238 YGLQ---PYYGMA---------HEEVIYYVRDGNILACPEN-------CPLELYNLMRLC 278

Query: 250 TVESPNQRINAKEM 263
             + P  R +   +
Sbjct: 279 WSKLPADRPSFCSI 292

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.6 bits (185), Expect = 1e-16
 Identities = 52/283 (18%), Positives = 97/283 (34%), Gaps = 73/283 (25%)

Query: 34  FSESNLISRGGFGSIYKAKIQDG---MEVVVKGFNLQY-GGAFKNLDVECNMM-KIIRHQ 88
               ++I  G FG + KA+I+     M+  +K           ++   E  ++ K+  H 
Sbjct: 12  IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHP 71

Query: 89  NLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYI---------------LDFFQRLH 133
           N+I ++ +C    +  L +E  PHG+L   L  S  +               L   Q LH
Sbjct: 72  NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 131

Query: 134 IMIDVASAVEYLH---FGH----STHLLLKEDQ---------------SLTQIQTLATIS 171
              DVA  ++YL    F H    + ++L+ E+                 + +      + 
Sbjct: 132 FAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVR 191

Query: 172 YMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKV 219
           +MA             D +++G+++ E  S         +  MT       L        
Sbjct: 192 WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGT----PYCGMTCAELYEKL-------- 239

Query: 220 VSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKE 262
                   +         C   V++L  +C  E P +R +  +
Sbjct: 240 -------PQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQ 275

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.7 bits (185), Expect = 1e-16
 Identities = 42/282 (14%), Positives = 87/282 (30%), Gaps = 72/282 (25%)

Query: 34  FSESNLISRGGFGSIYKA------KIQDGMEVVVKGFNLQYG-GAFKNLDVECNMMKIIR 86
            + S  + +G FG +Y+       K +    V +K  N             E ++MK   
Sbjct: 22  ITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN 81

Query: 87  HQNLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYI---------LDFFQRLHIMID 137
             ++++++   S+     +I+E M  G L   L +                 + + +  +
Sbjct: 82  CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGE 141

Query: 138 VASAVEYLHFGHSTHLLLK-------------------------EDQSLTQIQTLATISY 172
           +A  + YL+     H  L                           D      + L  + +
Sbjct: 142 IADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 201

Query: 173 MAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVV 220
           M+P            D ++FG+++ E  +  +   +    E  L+  +   L +      
Sbjct: 202 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP---- 257

Query: 221 SANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKE 262
                          + C   +F L   C   +P  R +  E
Sbjct: 258 ---------------DNCPDMLFELMRMCWQYNPKMRPSFLE 284

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.4 bits (182), Expect = 4e-16
 Identities = 41/291 (14%), Positives = 82/291 (28%), Gaps = 85/291 (29%)

Query: 39  LISRGGFGSIYKA------KIQDGMEVVVKGFNLQYG-GAFKNLDVECNMM-KIIRHQNL 90
           ++  G FG +  A      K    ++V VK    +      + L  E  MM ++  H+N+
Sbjct: 44  VLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENI 103

Query: 91  IKIISSCSKDDFKALILECMPHGSLGKCLSTSN----------------------YILDF 128
           + ++ +C+      LI E   +G L   L +                         +L F
Sbjct: 104 VNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTF 163

Query: 129 FQRLHIMIDVASAVEYLHFGHSTHLLLK-------------------------EDQSLTQ 163
              L     VA  +E+L F    H  L                          +   + +
Sbjct: 164 EDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVR 223

Query: 164 IQTLATISYMAPDT------------YNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDL 211
                 + +MAP++            +++GI++ E FS           +      +   
Sbjct: 224 GNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLI--- 280

Query: 212 LPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKE 262
                          +              ++ +   C      +R +   
Sbjct: 281 ---------------QNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPN 316

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.5 bits (180), Expect = 5e-16
 Identities = 39/281 (13%), Positives = 83/281 (29%), Gaps = 74/281 (26%)

Query: 34  FSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNL 90
           +     I  G +G   K +   DG  +V K  +         + L  E N+++ ++H N+
Sbjct: 6   YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNI 65

Query: 91  IKIISSC--SKDDFKALILECMPHGSLGKCL---STSNYILDFFQRLHIMIDVASAVEYL 145
           ++         +    +++E    G L   +   +     LD    L +M  +  A++  
Sbjct: 66  VRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKEC 125

Query: 146 H-------------------------------FGHSTHLLLKEDQSLTQIQTLATISYMA 174
           H                               FG +   +L  D S  +   + T  YM+
Sbjct: 126 HRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR--ILNHDTSFAK-AFVGTPYYMS 182

Query: 175 P------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSA 222
           P            D ++ G ++ E  +   P    F    + K     +      ++   
Sbjct: 183 PEQMNRMSYNEKSDIWSLGCLLYELCALMPP----FTA-FSQKELAGKIREGKFRRI--- 234

Query: 223 NLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM 263
                         +    +  +           R + +E+
Sbjct: 235 ------------PYRYSDELNEIITRMLNLKDYHRPSVEEI 263

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 73.6 bits (180), Expect = 1e-15
 Identities = 36/201 (17%), Positives = 64/201 (31%), Gaps = 42/201 (20%)

Query: 34  FSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNL------QYGGAFKNLDVECNMMKIIR 86
           FS   +I RGGFG +Y  +    G    +K  +       Q      N  +  +++    
Sbjct: 6   FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 65

Query: 87  HQNLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLH 146
              ++ +  +    D  + IL+ M  G L   LS      +         ++   +E++H
Sbjct: 66  CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSE-ADMRFYAAEIILGLEHMH 124

Query: 147 FGHSTHLLLKEDQSL---------------------TQIQTLATISYMAP---------- 175
                +  LK    L                         ++ T  YMAP          
Sbjct: 125 NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYD 184

Query: 176 ---DTYNFGIMIMETFSGKKP 193
              D ++ G M+ +   G  P
Sbjct: 185 SSADWFSLGCMLFKLLRGHSP 205

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.3 bits (179), Expect = 1e-15
 Identities = 44/286 (15%), Positives = 91/286 (31%), Gaps = 65/286 (22%)

Query: 34  FSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIK 92
           ++++ +I  G FG +Y+AK    G  V +K          +  + E  +M+ + H N+++
Sbjct: 22  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVR 77

Query: 93  IISSC------SKDDFKALILECMPHGSLG--KCLSTSNYILDFFQRLHIMIDVASAVEY 144
           +            + +  L+L+ +P       +  S +   L        M  +  ++ Y
Sbjct: 78  LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137

Query: 145 LHFGHSTHLLLK-----------------------EDQSLTQIQTLATISYMAP------ 175
           +H     H  +K                         +    +  + +  Y AP      
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGA 197

Query: 176 -------DTYNFGIMIMETFSGKKPTIKFFHGEM---TLKHWVNDLLPNSVMKVVSANLL 225
                  D ++ G ++ E   G+      F G+     L   +  L   +  ++   N  
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLGQPI----FPGDSGVDQLVEIIKVLGTPTREQIREMNPN 253

Query: 226 SREDEHFMTKEQCMSFVF---------NLAMECTVESPNQRINAKE 262
             E +    K    + VF          L       +P  R+   E
Sbjct: 254 YTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE 299

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.4 bits (174), Expect = 3e-15
 Identities = 40/279 (14%), Positives = 80/279 (28%), Gaps = 58/279 (20%)

Query: 38  NLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY-----GGAFKNLDVECNMMKIIRHQNLI 91
           + +  G F ++YKA+       V +K   L +      G  +    E  +++ + H N+I
Sbjct: 4   DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 63

Query: 92  KIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHST 151
            ++ +       +L+ + M        +  ++ +L        M+     +EYLH     
Sbjct: 64  GLLDAFGHKSNISLVFDFMETDLE-VIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWIL 122

Query: 152 HLLLK-----------------------EDQSLTQIQTLATISYMAP------------- 175
           H  LK                          +      + T  Y AP             
Sbjct: 123 HRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGV 182

Query: 176 DTYNFGIMIMETFSGKKP-----------TIKFFHGEMTLKHWVNDLLPNSVMKVVSANL 224
           D +  G ++ E                   I    G  T + W +       +   S   
Sbjct: 183 DMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPG 242

Query: 225 LSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM 263
           +          +  +  +        + +P  RI A + 
Sbjct: 243 IPLHHIFSAAGDDLLDLI----QGLFLFNPCARITATQA 277

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 70.7 bits (172), Expect = 7e-15
 Identities = 46/271 (16%), Positives = 83/271 (30%), Gaps = 47/271 (17%)

Query: 38  NLISRGGFGSIYKAKIQDGMEVVVKGFNL--QYGGAFKNLDVECNMMKIIRHQNLIKIIS 95
             I  G +G +YKA+   G    +K   L  +  G       E +++K ++H N++K+  
Sbjct: 8   EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67

Query: 96  SCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLL 155
                    L+ E +    L K L      L+       ++ + + + Y H     H  L
Sbjct: 68  VIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDL 126

Query: 156 K-----------------------EDQSLTQIQTLATISYMAP-------------DTYN 179
           K                                 + T+ Y AP             D ++
Sbjct: 127 KPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWS 186

Query: 180 FGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCM 239
            G +  E  +G          +  ++ +     PNS        L   +    + +    
Sbjct: 187 VGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPW 246

Query: 240 SFVF--------NLAMECTVESPNQRINAKE 262
                       +L  +     PNQRI AK+
Sbjct: 247 ESFLKGLDESGIDLLSKMLKLDPNQRITAKQ 277

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.9 bits (170), Expect = 1e-14
 Identities = 49/288 (17%), Positives = 89/288 (30%), Gaps = 81/288 (28%)

Query: 38  NLISRGGFGSIYKA--------KIQDGMEVVVKGFNLQYG-GAFKNLDVECNMMKII-RH 87
             +  G FG +  A        K     +V VK            +L  E  MMK+I +H
Sbjct: 19  KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 78

Query: 88  QNLIKIISSCSKDDFKALILECMPHGSLGKCL---------------STSNYILDFFQRL 132
           +N+I ++ +C++D    +I+E    G+L + L                     L     +
Sbjct: 79  KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 138

Query: 133 HIMIDVASAVEYLHFGHSTHLLLK-------------------------EDQSLTQIQTL 167
                VA  +EYL      H  L                           D         
Sbjct: 139 SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 198

Query: 168 ATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNS 215
             + +MAP            D ++FG+++ E F+                     +    
Sbjct: 199 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGS-------------PYPGVPVEE 245

Query: 216 VMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM 263
           + K++      +E         C + ++ +  +C    P+QR   K++
Sbjct: 246 LFKLL------KEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQL 287

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 69.9 bits (170), Expect = 1e-14
 Identities = 38/271 (14%), Positives = 70/271 (25%), Gaps = 61/271 (22%)

Query: 39  LISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSC 97
            I  G FG IY    I  G EV +K   ++       L +E  + K+++    I  I  C
Sbjct: 14  KIGSGSFGDIYLGTDIAAGEEVAIKLECVK--TKHPQLHIESKIYKMMQGGVGIPTIRWC 71

Query: 98  SKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLH----------- 146
             +    +++  +   SL    +  +        L +   + S +EY+H           
Sbjct: 72  GAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKP 131

Query: 147 ------------------FGHSTHLLLKEDQSLTQIQTLA----TISYMAP--------- 175
                             FG +              +       T  Y +          
Sbjct: 132 DNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQS 191

Query: 176 ---DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHF 232
              D  + G ++M    G  P           K+        S    V       E   +
Sbjct: 192 RRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATY 251

Query: 233 MTKEQCMSFVFNLAMECTVESPNQRINAKEM 263
           +               C     + + +   +
Sbjct: 252 LNF-------------CRSLRFDDKPDYSYL 269

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.7 bits (170), Expect = 2e-14
 Identities = 32/268 (11%), Positives = 75/268 (27%), Gaps = 60/268 (22%)

Query: 39  LISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSC 97
           ++  G  G + +    +   +  +K          K         +  +  ++++I+   
Sbjct: 19  VLGLGINGKVLQIFNKRTQEKFALKMLQ----DCPKARREVELHWRASQCPHIVRIVDVY 74

Query: 98  ----SKDDFKALILECMPHGSLGKCL-STSNYILDFFQRLHIMIDVASAVEYLHFGHSTH 152
               +      +++EC+  G L   +    +      +   IM  +  A++YLH  +  H
Sbjct: 75  ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 134

Query: 153 LLLKEDQSL-------------------------TQIQTLATISYMAP------------ 175
             +K +  L                         +      T  Y+AP            
Sbjct: 135 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 194

Query: 176 DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTK 235
           D ++ G+++     G  P        ++        +          + +S E +  +  
Sbjct: 195 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRN 254

Query: 236 EQCMSFVFNLAMECTVESPNQRINAKEM 263
                             P QR+   E 
Sbjct: 255 -------------LLKTEPTQRMTITEF 269

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 68.9 bits (168), Expect = 2e-14
 Identities = 45/281 (16%), Positives = 90/281 (32%), Gaps = 69/281 (24%)

Query: 34  FSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECN----------MM 82
           +    ++ RG    + +        E  VK  ++  GG+F   +V+            + 
Sbjct: 5   YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 64

Query: 83  KIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAV 142
           K+  H N+I++  +   + F  L+ + M  G L   L+     L   +   IM  +   +
Sbjct: 65  KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLT-EKVTLSEKETRKIMRALLEVI 123

Query: 143 EYLHFGHSTH-------LLLKEDQSL---------------TQIQTLATISYMAP----- 175
             LH  +  H       +LL +D ++                  +   T SY+AP     
Sbjct: 124 CALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIEC 183

Query: 176 -------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSA 222
                        D ++ G+++    +G  P    F     +      +  N        
Sbjct: 184 SMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP----FWHRKQMLMLRMIMSGNYQFGSPEW 239

Query: 223 NLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM 263
           +  S   +  +++               V  P +R  A+E 
Sbjct: 240 DDYSDTVKDLVSR-------------FLVVQPQKRYTAEEA 267

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.1 bits (168), Expect = 2e-14
 Identities = 43/276 (15%), Positives = 88/276 (31%), Gaps = 47/276 (17%)

Query: 34  FSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNL--QYGGAFKNLDVECNMMKIIRHQNL 90
           F +   I  G +G +YKA+    G  V +K   L  +  G       E +++K + H N+
Sbjct: 4   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63

Query: 91  IKIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHS 150
           +K++     ++   L+ E +         +++   +        +  +   + + H    
Sbjct: 64  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 123

Query: 151 THLLLK-----------------------EDQSLTQIQTLATISYMAP------------ 175
            H  LK                            T    + T+ Y AP            
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA 183

Query: 176 -DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT 234
            D ++ G +  E  + +         +   + +     P+ V+     ++   +      
Sbjct: 184 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 243

Query: 235 KEQCMSFVF--------NLAMECTVESPNQRINAKE 262
             Q  S V         +L  +     PN+RI+AK 
Sbjct: 244 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 279

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.6 bits (167), Expect = 4e-14
 Identities = 46/274 (16%), Positives = 86/274 (31%), Gaps = 71/274 (25%)

Query: 39  LISRGGFGSIYKAK-IQDGMEVVVKGFNLQY------GGAFKNLDVECNMMKIIRHQNLI 91
            +  G F  + K +    G++   K    +       G + ++++ E +++K I+H N+I
Sbjct: 17  ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 76

Query: 92  KIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLH----- 146
            +           LILE +  G L          L   +    +  + + V YLH     
Sbjct: 77  TLHEVYENKTDVILILELVAGGELFDF-LAEKESLTEEEATEFLKQILNGVYYLHSLQIA 135

Query: 147 -------------------------FGHSTHLLLKEDQSLTQIQTLATISYMAP------ 175
                                    FG +  +    D          T  ++AP      
Sbjct: 136 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI----DFGNEFKNIFGTPEFVAPEIVNYE 191

Query: 176 ------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSRED 229
                 D ++ G++     SG  P    F G+               +  VSA     ED
Sbjct: 192 PLGLEADMWSIGVITYILLSGASP----FLGDT----------KQETLANVSAVNYEFED 237

Query: 230 EHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM 263
           E+F       +   +      V+ P +R+  ++ 
Sbjct: 238 EYF---SNTSALAKDFIRRLLVKDPKKRMTIQDS 268

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.8 bits (165), Expect = 6e-14
 Identities = 38/265 (14%), Positives = 84/265 (31%), Gaps = 62/265 (23%)

Query: 38  NLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDV----ECNMMKIIRHQNLIK 92
            ++ +G FG ++ A+  +      +K           +++     +  +     H  L  
Sbjct: 8   KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 67

Query: 93  IISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTH 152
           +  +    +    ++E +  G L   +  S +  D  +      ++   +++LH     +
Sbjct: 68  MFCTFQTKENLFFVMEYLNGGDLMYHIQ-SCHKFDLSRATFYAAEIILGLQFLHSKGIVY 126

Query: 153 LLLKEDQSL-----------------------TQIQTLATISYMAP------------DT 177
             LK D  L                              T  Y+AP            D 
Sbjct: 127 RDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDW 186

Query: 178 YNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQ 237
           ++FG+++ E   G+ P    FHG+   + + +  + N          L +E +  + K  
Sbjct: 187 WSFGVLLYEMLIGQSP----FHGQDEEELFHSIRMDNPFYP----RWLEKEAKDLLVK-- 236

Query: 238 CMSFVFNLAMECTVESPNQRINAKE 262
                        V  P +R+  + 
Sbjct: 237 -----------LFVREPEKRLGVRG 250

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.0 bits (163), Expect = 9e-14
 Identities = 42/269 (15%), Positives = 76/269 (28%), Gaps = 71/269 (26%)

Query: 39  LISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDV------ECNMMKIIR--HQN 89
           L+  GGFGS+Y    + D + V +K         +  L        E  ++K +      
Sbjct: 11  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70

Query: 90  LIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGH 149
           +I+++    + D   LILE            T    L           V  AV + H   
Sbjct: 71  VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 130

Query: 150 STH-------LLLKEDQSLTQI---------------QTLATISYMAP------------ 175
             H       +L+  ++   ++                   T  Y  P            
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 190

Query: 176 -DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT 234
              ++ GI++ +   G  P    F  +  +                    +S E +H + 
Sbjct: 191 AAVWSLGILLYDMVCGDIP----FEHDEEIIRGQVFFRQR----------VSSECQHLIR 236

Query: 235 KEQCMSFVFNLAMECTVESPNQRINAKEM 263
                         C    P+ R   +E+
Sbjct: 237 W-------------CLALRPSDRPTFEEI 252

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.6 bits (164), Expect = 1e-13
 Identities = 37/278 (13%), Positives = 85/278 (30%), Gaps = 53/278 (19%)

Query: 38  NLISRGGFGSIYKAK-IQDGMEVVVKGFN-LQYGGAFKNLDVECNMMKIIRHQNLIKIIS 95
           + I  G +G +  A    + + V +K  +  ++    +    E  ++   RH+N+I I  
Sbjct: 14  SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 73

Query: 96  SCSKDDFKALILECMPHGSLGKCLST--SNYILDFFQRLHIMIDVASAVEYLH------- 146
                  + +    +    +G  L        L      + +  +   ++Y+H       
Sbjct: 74  IIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 133

Query: 147 -------------------FGHSTHLLLKEDQSLTQIQTLATISYMAP------------ 175
                              FG +       D +    + +AT  Y AP            
Sbjct: 134 DLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS 193

Query: 176 -DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT 234
            D ++ G ++ E  S +       + +           P+        NL +R     + 
Sbjct: 194 IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLP 253

Query: 235 KEQCMSF----------VFNLAMECTVESPNQRINAKE 262
            +  + +            +L  +    +P++RI  ++
Sbjct: 254 HKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ 291

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.1 bits (160), Expect = 3e-13
 Identities = 46/281 (16%), Positives = 88/281 (31%), Gaps = 60/281 (21%)

Query: 38  NLISRGGFGSIYKAK--IQDGMEVVVKGFNLQYG--GAFKNLDVECNMMKII---RHQNL 90
             I  G +G ++KA+     G  V +K   +Q G  G   +   E  +++ +    H N+
Sbjct: 13  AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNV 72

Query: 91  IKIISSCSKDDFKA-----LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYL 145
           +++   C+           L+ E +               +       +M  +   +++L
Sbjct: 73  VRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFL 132

Query: 146 HFGHSTHLLLK----------------------EDQSLTQIQTLATISYMAP-------- 175
           H     H  LK                          +     + T+ Y AP        
Sbjct: 133 HSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSY 192

Query: 176 ----DTYNFGIMIMETFSGKKPTIKFFHGE---MTLKHWVNDLLPNSVMKVVSANLLSRE 228
               D ++ G +  E F  K      F G      L   ++ +             L R+
Sbjct: 193 ATPVDLWSVGCIFAEMFRRKPL----FRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQ 248

Query: 229 DEHFMTKEQCMSFV-------FNLAMECTVESPNQRINAKE 262
             H  + +    FV        +L ++C   +P +RI+A  
Sbjct: 249 AFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYS 289

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.0 bits (157), Expect = 6e-13
 Identities = 42/273 (15%), Positives = 81/273 (29%), Gaps = 49/273 (17%)

Query: 38  NLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYG--GAFKNLDVECNMMKIIRHQNLIKII 94
             I  G +G+++KAK  +    V +K   L     G   +   E  ++K ++H+N++++ 
Sbjct: 8   EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67

Query: 95  SSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLL 154
                D    L+ E           S +  +         +  +   + + H  +  H  
Sbjct: 68  DVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDP-EIVKSFLFQLLKGLGFCHSRNVLHRD 126

Query: 155 LK-----------------------EDQSLTQIQTLATISYMAP-------------DTY 178
           LK                                 + T+ Y  P             D +
Sbjct: 127 LKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMW 186

Query: 179 NFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQC 238
           + G +  E  +  +P       +  LK     L   +  +  S   L     + M     
Sbjct: 187 SAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATT 246

Query: 239 MSFVF---------NLAMECTVESPNQRINAKE 262
                         +L       +P QRI+A+E
Sbjct: 247 SLVNVVPKLNATGRDLLQNLLKCNPVQRISAEE 279

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.1 bits (155), Expect = 2e-12
 Identities = 44/275 (16%), Positives = 92/275 (33%), Gaps = 51/275 (18%)

Query: 38  NLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKII 94
           + +  G +GS+  A   + G+ V VK  +  +      K    E  ++K ++H+N+I ++
Sbjct: 24  SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 83

Query: 95  SSC----SKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHS 150
                  S ++F  + L     G+    +      L       ++  +   ++Y+H    
Sbjct: 84  DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSADI 142

Query: 151 THLLLK--------------------EDQSLTQIQTLATISYMAP-------------DT 177
            H  LK                              +AT  Y AP             D 
Sbjct: 143 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDI 202

Query: 178 YNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQ 237
           ++ G ++ E  +G+       H +           P + +    ++  +R     +T+  
Sbjct: 203 WSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMP 262

Query: 238 CMSF----------VFNLAMECTVESPNQRINAKE 262
            M+F            +L  +  V   ++RI A +
Sbjct: 263 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 297

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 63.6 bits (154), Expect = 2e-12
 Identities = 41/248 (16%), Positives = 86/248 (34%), Gaps = 46/248 (18%)

Query: 38  NLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLD---VECNMMKIIRHQNLIKI 93
             +  G FG ++  +   +G    +K    +     K ++    E  M+ I+ H  +I++
Sbjct: 10  RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRM 69

Query: 94  ISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTH- 152
             +        +I++ +  G L   L   +             +V  A+EYLH     + 
Sbjct: 70  WGTFQDAQQIFMIMDYIEGGEL-FSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYR 128

Query: 153 ------LLLKEDQSL-------------TQIQTLATISYMAP------------DTYNFG 181
                 +LL ++  +                    T  Y+AP            D ++FG
Sbjct: 129 DLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFG 188

Query: 182 IMIMETFSGKKP---------TIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHF 232
           I+I E  +G  P           K  + E+    + N+ + + + ++++ +L  R     
Sbjct: 189 ILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQ 248

Query: 233 MTKEQCMS 240
              E   +
Sbjct: 249 NGTEDVKN 256

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.0 bits (152), Expect = 3e-12
 Identities = 43/287 (14%), Positives = 93/287 (32%), Gaps = 63/287 (21%)

Query: 38  NLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKII 94
             I +G FG ++KA+  + G +V +K   ++    G       E  ++++++H+N++ +I
Sbjct: 16  AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLI 75

Query: 95  SSCSKDDFKA--------LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLH 146
             C               L+ +   H   G   +         +   +M  + + + Y+H
Sbjct: 76  EICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK-FTLSEIKRVMQMLLNGLYYIH 134

Query: 147 --------------------------FGHSTHLLLKEDQSLTQIQTLA-TISYMAP---- 175
                                     FG +    L ++    +      T+ Y  P    
Sbjct: 135 RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLL 194

Query: 176 ---------DTYNFGIMIMETFSGKKP-----------TIKFFHGEMTLKHWVNDLLPNS 215
                    D +  G ++ E ++                I    G +T + W N      
Sbjct: 195 GERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYEL 254

Query: 216 VMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKE 262
             K+       R+ +  +       +  +L  +  V  P QRI++ +
Sbjct: 255 YEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDD 301

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.0 bits (152), Expect = 3e-12
 Identities = 43/288 (14%), Positives = 80/288 (27%), Gaps = 81/288 (28%)

Query: 38  NLISRGGFGSIYKA------KIQDGMEVVVKGFNLQYG-GAFKNLDVECNMMKIIRHQNL 90
             + RG FG + +A      K      V VK           + L  E  ++  I H   
Sbjct: 19  KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 78

Query: 91  IKII--SSCSKDDFKALILECMPHGSLGKCL---------------STSNYILDFFQRLH 133
           +  +  +         +I+E    G+L   L                     L     + 
Sbjct: 79  VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 138

Query: 134 IMIDVASAVEYLH--------------------------FGHSTHLLLKEDQSLTQIQTL 167
               VA  +E+L                           FG +   + K+   + +    
Sbjct: 139 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA-RDIYKDPDYVRKGDAR 197

Query: 168 ATISYMAPDTYN------------FGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNS 215
             + +MAP+T              FG+++ E FS        + G    + +   L    
Sbjct: 198 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS---PYPGVKIDEEFCRRL---- 250

Query: 216 VMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM 263
                      +E       +     ++   ++C    P+QR    E+
Sbjct: 251 -----------KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 287

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.3 bits (153), Expect = 3e-12
 Identities = 39/273 (14%), Positives = 81/273 (29%), Gaps = 49/273 (17%)

Query: 39  LISRGGFGSIYKAK-IQDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIIS 95
            +  G +G++  A   + G +V +K     +      K    E  ++K +RH+N+I ++ 
Sbjct: 25  PVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLD 84

Query: 96  SCSKDDFKALILECMPHGSLGKCLSTS---NYILDFFQRLHIMIDVASAVEYLHFGHSTH 152
             + D+      +                 +  L   +   ++  +   + Y+H     H
Sbjct: 85  VFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIH 144

Query: 153 LLLKEDQSL--------------------TQIQTLATISYMAP-------------DTYN 179
             LK                              + T  Y AP             D ++
Sbjct: 145 RDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWS 204

Query: 180 FGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCM 239
            G ++ E  +GK       H +   +       P +       +  ++     + + +  
Sbjct: 205 VGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKK 264

Query: 240 SF----------VFNLAMECTVESPNQRINAKE 262
            F            NL  +  V    QR+ A E
Sbjct: 265 DFASILTNASPLAVNLLEKMLVLDAEQRVTAGE 297

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.0 bits (147), Expect = 2e-11
 Identities = 35/199 (17%), Positives = 64/199 (32%), Gaps = 40/199 (20%)

Query: 34  FSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGA---FKNLDVECNMMKIIRHQN 89
           F    L+ +G FG +   +    G    +K    +   A     +   E  +++  RH  
Sbjct: 7   FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66

Query: 90  LIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGH 149
           L  +  +    D    ++E    G L   LS    +    +      ++ SA+EYLH   
Sbjct: 67  LTALKYAFQTHDRLCFVMEYANGGELFFHLS-RERVFTEERARFYGAEIVSALEYLHSRD 125

Query: 150 STHLLLKEDQSL-----------------------TQIQTLATISYMAP----------- 175
             +  +K +  +                       T      T  Y+AP           
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRA 185

Query: 176 -DTYNFGIMIMETFSGKKP 193
            D +  G+++ E   G+ P
Sbjct: 186 VDWWGLGVVMYEMMCGRLP 204

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 60.2 bits (145), Expect = 2e-11
 Identities = 17/119 (14%), Positives = 39/119 (32%), Gaps = 3/119 (2%)

Query: 39  LISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSC 97
            I  G FG I++   + +  +V +K    +       L  E    K++     I  +   
Sbjct: 12  RIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA--PQLRDEYRTYKLLAGCTGIPNVYYF 69

Query: 98  SKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLK 156
            ++    +++  +   SL   L                  + + V+ +H     +  +K
Sbjct: 70  GQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIK 128

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 55.6 bits (133), Expect = 1e-09
 Identities = 36/212 (16%), Positives = 69/212 (32%), Gaps = 50/212 (23%)

Query: 38  NLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIR-HQNLIKIIS 95
             + RG +  +++A  I +  +VVVK          K    E  +++ +R   N+I +  
Sbjct: 41  RKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKR---EIKILENLRGGPNIITLAD 97

Query: 96  SCSKDDFK--ALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLH------- 146
                  +  AL+ E + +    +   T    L  +     M ++  A++Y H       
Sbjct: 98  IVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMGIMHR 153

Query: 147 -FGHSTHLLLKEDQSL---------------TQIQTLATISYMAP-------------DT 177
                  ++  E + L                    +A+  +  P             D 
Sbjct: 154 DVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDM 213

Query: 178 YNFGIMIMETFSGKKPTIKFFHGEMTLKHWVN 209
           ++ G M+      K+P   FFHG       V 
Sbjct: 214 WSLGCMLASMIFRKEP---FFHGHDNYDQLVR 242

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 55.2 bits (132), Expect = 1e-09
 Identities = 39/268 (14%), Positives = 80/268 (29%), Gaps = 46/268 (17%)

Query: 18  LKSLDLSNNNFSGLFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLD 76
           LK  +  + N + L  F     +  G FG +   K  + G    +K  + Q     K ++
Sbjct: 27  LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIE 86

Query: 77  ---VECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLH 133
               E  +++ +    L+K+  S   +    +++E +  G +   L              
Sbjct: 87  HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR-FSEPHARF 145

Query: 134 IMIDVASAVEYLHFGHSTH--------LLLKEDQSLTQIQTLAT------------ISYM 173
               +    EYLH     +        L+ ++          A                +
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEAL 205

Query: 174 AP------------DTYNFGIMIMETFSGKKP---------TIKFFHGEMTLKHWVNDLL 212
           AP            D +  G++I E  +G  P           K   G++      +  L
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 265

Query: 213 PNSVMKVVSANLLSREDEHFMTKEQCMS 240
            + +  ++  +L  R            +
Sbjct: 266 KDLLRNLLQVDLTKRFGNLKNGVNDIKN 293

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.4 bits (127), Expect = 7e-09
 Identities = 36/227 (15%), Positives = 70/227 (30%), Gaps = 43/227 (18%)

Query: 20  SLDLSNNNFSGLFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY--GGAFKNLD 76
           S+++ ++ F+ L  +     I  G  G +  A        V +K  +  +      K   
Sbjct: 5   SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY 64

Query: 77  VECNMMKIIRHQNLIKIISSCSKDDFKALILECMPHGSL--GKCLSTSNYILDFFQRLHI 134
            E  +MK + H+N+I +++  +         +      L            LD  +  ++
Sbjct: 65  RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL 124

Query: 135 MIDVASAVEYLHFGHSTHLLLK----------------------EDQSLTQIQTLATISY 172
           +  +   +++LH     H  LK                         S      + T  Y
Sbjct: 125 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYY 184

Query: 173 MAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHW 207
            AP            D ++ G ++ E    K      F G   +  W
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL----FPGRDYIDQW 227

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.5 bits (117), Expect = 1e-07
 Identities = 20/124 (16%), Positives = 46/124 (37%), Gaps = 10/124 (8%)

Query: 38  NLISRGGFGSIYKAK----IQDGMEVVVKGFN----LQYGGAFKNLDVECNMMKIIRHQ- 88
            ++  G +G ++  +       G    +K       +Q     ++   E  +++ IR   
Sbjct: 30  KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 89

Query: 89  NLIKIISSCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFG 148
            L+ +  +   +    LIL+ +  G L   LS         +    + ++  A+E+LH  
Sbjct: 90  FLVTLHYAFQTETKLHLILDYINGGELFTHLS-QRERFTEHEVQIYVGEIVLALEHLHKL 148

Query: 149 HSTH 152
              +
Sbjct: 149 GIIY 152

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 45.2 bits (106), Expect = 2e-06
 Identities = 15/135 (11%), Positives = 36/135 (26%), Gaps = 22/135 (16%)

Query: 38  NLISRGGFGSIYKAKIQDGMEVVVKGFNL----------QYGGAFKNLDVECNMMKIIRH 87
            L+  G   +++    +   E VVK   +          +      +  V          
Sbjct: 6   KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEF 65

Query: 88  QNLIKIISSCSKDDF----KALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVE 143
           + L K+        +     A+++E +    L +                ++  +   V 
Sbjct: 66  RALQKLQGLAVPKVYAWEGNAVLMELIDAKELYRV--------RVENPDEVLDMILEEVA 117

Query: 144 YLHFGHSTHLLLKED 158
             +     H  L + 
Sbjct: 118 KFYHRGIVHGDLSQY 132

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 44.6 bits (104), Expect = 6e-06
 Identities = 15/128 (11%), Positives = 39/128 (30%), Gaps = 17/128 (13%)

Query: 39  LISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSC 97
            +  G F +++ AK + +   V +K          +  + E  +++ +   +  K  S  
Sbjct: 20  KLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYT-EAAEDEIKLLQRVNDADNTKEDSMG 78

Query: 98  SKDDFK---------------ALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAV 142
           +    K                ++ E +    L       +  +       I   +   +
Sbjct: 79  ANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGL 138

Query: 143 EYLHFGHS 150
           +Y+H    
Sbjct: 139 DYMHRRCG 146

>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313

class: Alpha and beta proteins (a/b)
fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
superfamily: L domain-like
family: Polygalacturonase inhibiting protein PGIP
domain: Polygalacturonase inhibiting protein PGIP
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

 Score = 40.9 bits (94), Expect = 8e-05
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 1   YNRLQDSLRNSIGDLTSLKSLDLSNNNFSG 30
            NR+  +L   +  L  L SL++S NN  G
Sbjct: 253 NNRIYGTLPQGLTQLKFLHSLNVSFNNLCG 282

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	263
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	100.0
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.79
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	97.97
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	97.37
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	96.87
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	92.27
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	91.88
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	85.59

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-49  Score=321.65  Aligned_cols=213  Identities=20%  Similarity=0.246  Sum_probs=174.2

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      ++|+..+.||+|+||+||+|.. .+++.||||++.... ....+.+.+|+++++.++||||+++++++.+.+..|+||||
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy   84 (271)
T d1nvra_           5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   84 (271)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEec
Confidence            4699999999999999999994 569999999997653 23445688999999999999999999999999999999999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-------------------------
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-------------------------  164 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-------------------------  164 (263)
                      +++|+|.+++.... .+++..+..++.|++.||+|||+++|+||||||+||+.+.                         
T Consensus        85 ~~gg~L~~~l~~~~-~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~~~  163 (271)
T d1nvra_          85 CSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN  163 (271)
T ss_dssp             CTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEECCBC
T ss_pred             cCCCcHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEECCCCCEEEccchhheeeccCCcccccc
Confidence            99999999997654 4899999999999999999999999999999999999432                         


Q ss_pred             cccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccc
Q 039276          165 QTLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEH  231 (263)
Q Consensus       165 ~~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (263)
                      ...||+.|+||             |||||||++|||++|+.||.........+..+....                  ..
T Consensus       164 ~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~------------------~~  225 (271)
T d1nvra_         164 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK------------------TY  225 (271)
T ss_dssp             CCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTC------------------TT
T ss_pred             ceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC------------------CC
Confidence            23689999999             999999999999999999975433322222221110                  00


Q ss_pred             ccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          232 FMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       232 ~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ......+++++.+++.+||+.||++|||++|+
T Consensus       226 ~~~~~~~s~~~~~li~~~L~~dP~~R~t~~ei  257 (271)
T d1nvra_         226 LNPWKKIDSAPLALLHKILVENPSARITIPDI  257 (271)
T ss_dssp             STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred             CCccccCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence            11234567789999999999999999999864

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-49  Score=324.65  Aligned_cols=216  Identities=18%  Similarity=0.243  Sum_probs=181.0

Q ss_pred             ccccccccceecccCceEEEEEEe-cCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEe
Q 039276           30 GLFLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        30 ~~~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      ..+.|+..+.||+|+||.||+|.. .+++.||+|++........+.+.+|+++++.++||||+++++++.+.+..++|||
T Consensus        10 p~d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmE   89 (288)
T d2jfla1          10 PEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIE   89 (288)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cccCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEe
Confidence            345699999999999999999994 5689999999988766777889999999999999999999999999999999999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-----------------------c
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-----------------------Q  165 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-----------------------~  165 (263)
                      ||++|+|.+++......+++..+..++.|++.||+|||+++|+||||||+||+.+.                       .
T Consensus        90 y~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~~~~  169 (288)
T d2jfla1          90 FCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDS  169 (288)
T ss_dssp             CCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHHHTC
T ss_pred             cCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeECCCCCEEEEechhhhccCCCcccccc
Confidence            99999999998765556999999999999999999999999999999999999533                       2


Q ss_pred             ccccccccCc-----------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccc
Q 039276          166 TLATISYMAP-----------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSRE  228 (263)
Q Consensus       166 ~~g~~~y~aP-----------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (263)
                      ..||+.|+||                 |||||||++|||++|+.||...... ..+.....                 ..
T Consensus       170 ~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~-~~~~~i~~-----------------~~  231 (288)
T d2jfla1         170 FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPM-RVLLKIAK-----------------SE  231 (288)
T ss_dssp             CCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGG-GHHHHHHH-----------------SC
T ss_pred             cccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHH-HHHHHHHc-----------------CC
Confidence            3689999999                 9999999999999999998643111 11111111                 11


Q ss_pred             cccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          229 DEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       229 ~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ......+..+++++.+|+.+||+.||++|||++|+
T Consensus       232 ~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~el  266 (288)
T d2jfla1         232 PPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQL  266 (288)
T ss_dssp             CCCCSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred             CCCCCccccCCHHHHHHHHHHccCChhHCcCHHHH
Confidence            11122345678889999999999999999999874

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-48  Score=320.66  Aligned_cols=212  Identities=23%  Similarity=0.311  Sum_probs=177.1

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      .+|+..+.||+|+||.||+|. ..+|+.||||++........+.+.+|+++++.++||||+++++++.+.+..|+|||||
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~   99 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   99 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEec
Confidence            469999999999999999999 5679999999998776666778999999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-----------------------ccc
Q 039276          111 PHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-----------------------QTL  167 (263)
Q Consensus       111 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-----------------------~~~  167 (263)
                      ++|+|.+++...  .+++..+..++.|++.||+|||+++|+||||||+||+.+.                       ...
T Consensus       100 ~gg~L~~~~~~~--~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~  177 (293)
T d1yhwa1         100 AGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV  177 (293)
T ss_dssp             TTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCC
T ss_pred             CCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECCCCcEeeccchhheeeccccccccccc
Confidence            999999988764  3899999999999999999999999999999999999432                       225


Q ss_pred             ccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccch
Q 039276          168 ATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTK  235 (263)
Q Consensus       168 g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (263)
                      ||+.|+||            |||||||++|||++|+.||......+ .+...            ...     .....+.+
T Consensus       178 gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~-~~~~~------------~~~-----~~~~~~~~  239 (293)
T d1yhwa1         178 GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR-ALYLI------------ATN-----GTPELQNP  239 (293)
T ss_dssp             SCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHH------------HHH-----CSCCCSSG
T ss_pred             cCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHH-HHHHH------------HhC-----CCCCCCCc
Confidence            89999999            99999999999999999986321110 01101            000     01111234


Q ss_pred             HHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          236 EQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       236 ~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ..+++++.+++.+||+.||++|||++|+
T Consensus       240 ~~~s~~~~~li~~~L~~dP~~R~s~~ei  267 (293)
T d1yhwa1         240 EKLSAIFRDFLNRCLDMDVEKRGSAKEL  267 (293)
T ss_dssp             GGSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred             ccCCHHHHHHHHHHccCChhHCcCHHHH
Confidence            5677889999999999999999999764

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.1e-49  Score=318.59  Aligned_cols=210  Identities=22%  Similarity=0.286  Sum_probs=175.2

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecC---CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQ---YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      ++|+..+.||+|+||.||+|.. .+++.||+|++...   .....+.+.+|+++++.++||||+++++++.+.+..|+||
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm   85 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL   85 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEE
Confidence            5699999999999999999995 56899999999754   2344667889999999999999999999999999999999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc---------------------cc
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI---------------------QT  166 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~---------------------~~  166 (263)
                      ||+++|+|.+++..... +++..+..++.|++.||+|||+++++||||||+||+.+.                     ..
T Consensus        86 Ey~~~g~L~~~l~~~~~-l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~  164 (263)
T d2j4za1          86 EYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL  164 (263)
T ss_dssp             ECCTTCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCCCEET
T ss_pred             eecCCCcHHHHHhhcCC-CCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceecCCCCEeecccceeeecCCCccccc
Confidence            99999999999987554 899999999999999999999999999999999999543                     23


Q ss_pred             cccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccc
Q 039276          167 LATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT  234 (263)
Q Consensus       167 ~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (263)
                      .||+.|+||            |||||||++|||++|+.||..... ...+.....                    .....
T Consensus       165 ~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~-~~~~~~i~~--------------------~~~~~  223 (263)
T d2j4za1         165 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY-QETYKRISR--------------------VEFTF  223 (263)
T ss_dssp             TEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH-HHHHHHHHT--------------------TCCCC
T ss_pred             CCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCH-HHHHHHHHc--------------------CCCCC
Confidence            689999999            999999999999999999863210 011111100                    01122


Q ss_pred             hHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          235 KEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       235 ~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +..+++++.+++.+||+.||++|||++|+
T Consensus       224 p~~~s~~~~~li~~~L~~dp~~R~t~~ei  252 (263)
T d2j4za1         224 PDFVTEGARDLISRLLKHNPSQRPMLREV  252 (263)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             CccCCHHHHHHHHHHccCCHhHCcCHHHH
Confidence            44567789999999999999999999874

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=7.2e-48  Score=319.36  Aligned_cols=214  Identities=16%  Similarity=0.217  Sum_probs=167.6

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      +.|+..+.||+|+||+||+|.. .+++.||||++.... ....+.+.+|+.+++.++||||+++++++.+.+..|+||||
T Consensus         9 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE~   88 (307)
T d1a06a_           9 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQL   88 (307)
T ss_dssp             GTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             cceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence            4599999999999999999994 568999999997653 23345677899999999999999999999999999999999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-------------------------
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-------------------------  164 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-------------------------  164 (263)
                      |++|+|.+++...+. +++..+..++.|++.||+|||+++++||||||+||+...                         
T Consensus        89 ~~gg~L~~~l~~~~~-l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~~~  167 (307)
T d1a06a_          89 VSGGELFDRIVEKGF-YTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLS  167 (307)
T ss_dssp             CCSCBHHHHHHTCSC-CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC-------------
T ss_pred             cCCCcHHHhhhcccC-CCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccceeEEccCCCeee
Confidence            999999999976554 899999999999999999999999999999999999421                         


Q ss_pred             cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccc
Q 039276          165 QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHF  232 (263)
Q Consensus       165 ~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (263)
                      ...||+.|+||            |||||||++|||++|+.||...... ........                .......
T Consensus       168 ~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~-~~~~~i~~----------------~~~~~~~  230 (307)
T d1a06a_         168 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDA-KLFEQILK----------------AEYEFDS  230 (307)
T ss_dssp             -----CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHT----------------TCCCCCT
T ss_pred             eeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHH-HHHHHHhc----------------cCCCCCC
Confidence            23589999999            9999999999999999998642110 01111111                1111111


Q ss_pred             cchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          233 MTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       233 ~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +....+++++.+++.+||+.||++|||++|+
T Consensus       231 ~~~~~~s~~~~~li~~~L~~dP~~R~s~~ei  261 (307)
T d1a06a_         231 PYWDDISDSAKDFIRHLMEKDPEKRFTCEQA  261 (307)
T ss_dssp             TTTTTSCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             ccccCCCHHHHHHHHHHccCCHhHCcCHHHH
Confidence            2335677889999999999999999999864

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.2e-48  Score=315.82  Aligned_cols=210  Identities=19%  Similarity=0.232  Sum_probs=174.6

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecC---CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQ---YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      ++|+..+.||+|+||+||+|.. .+++.||||++...   .....+.+.+|+++++.++||||+++++++.+.+..|+||
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm   87 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL   87 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence            4699999999999999999994 56899999999754   2344567889999999999999999999999999999999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-----------------------
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-----------------------  164 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-----------------------  164 (263)
                      ||+++|+|.+++...+. +++..+..++.|++.||+|||+++|+||||||+||+.+.                       
T Consensus        88 Ey~~gg~L~~~~~~~~~-l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~~~  166 (288)
T d1uu3a_          88 SYAKNGELLKYIRKIGS-FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR  166 (288)
T ss_dssp             CCCTTEEHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECC-------
T ss_pred             EccCCCCHHHhhhccCC-CCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccCCCceEEecccccceecccCCcccc
Confidence            99999999999887654 899999999999999999999999999999999999432                       


Q ss_pred             --cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccc
Q 039276          165 --QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDE  230 (263)
Q Consensus       165 --~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (263)
                        ...||+.|+||            |||||||++|||++|+.||.... ....+...            ...        
T Consensus       167 ~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~-~~~~~~~i------------~~~--------  225 (288)
T d1uu3a_         167 ANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN-EYLIFQKI------------IKL--------  225 (288)
T ss_dssp             ---CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHH------------HTT--------
T ss_pred             cccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcC-HHHHHHHH------------HcC--------
Confidence              23589999999            99999999999999999986321 00111111            100        


Q ss_pred             cccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          231 HFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       231 ~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ....+..+++++.+|+.+||+.||++|||++|+
T Consensus       226 ~~~~p~~~s~~~~~li~~~L~~dP~~R~t~~e~  258 (288)
T d1uu3a_         226 EYDFPEKFFPKARDLVEKLLVLDATKRLGCEEM  258 (288)
T ss_dssp             CCCCCTTCCHHHHHHHHTTSCSSGGGSTTSGGG
T ss_pred             CCCCCccCCHHHHHHHHHHccCCHhHCcCHHHH
Confidence            011234567789999999999999999999874

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=1.8e-47  Score=322.19  Aligned_cols=216  Identities=18%  Similarity=0.204  Sum_probs=178.4

Q ss_pred             cccccccceecccCceEEEEEE-ecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           31 LFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      .++|+..+.||+|+||.||+|. ..+|+.||||++........+.+.+|+.+++.++||||+++++++.+.+..|+||||
T Consensus        25 l~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~  104 (350)
T d1koaa2          25 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF  104 (350)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             ccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            4579999999999999999999 457999999999877656677888999999999999999999999999999999999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc------------------------c
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI------------------------Q  165 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~------------------------~  165 (263)
                      |++|+|.+++......+++..+..++.||+.||+|||+++++||||||+||+...                        .
T Consensus       105 ~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~  184 (350)
T d1koaa2         105 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV  184 (350)
T ss_dssp             CCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSCEEE
T ss_pred             CCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccCCCCeEEEeecchheecccccccce
Confidence            9999999999665555999999999999999999999999999999999998532                        1


Q ss_pred             ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccccc
Q 039276          166 TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFM  233 (263)
Q Consensus       166 ~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (263)
                      ..||+.|+||            |||||||++|||++|+.||.... ....+......            ..    .....
T Consensus       185 ~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~-~~~~~~~i~~~------------~~----~~~~~  247 (350)
T d1koaa2         185 TTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEN-DDETLRNVKSC------------DW----NMDDS  247 (350)
T ss_dssp             ECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHT------------CC----CSCCG
T ss_pred             ecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCC-HHHHHHHHHhC------------CC----CCCcc
Confidence            3579999999            99999999999999999986321 11111111110            00    00111


Q ss_pred             chHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          234 TKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       234 ~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ....+++++.+|+.+||+.||++|||++|+
T Consensus       248 ~~~~~s~~~~~li~~~L~~dP~~R~t~~ei  277 (350)
T d1koaa2         248 AFSGISEDGKDFIRKLLLADPNTRMTIHQA  277 (350)
T ss_dssp             GGGGCCHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred             cccCCCHHHHHHHHHHccCChhHCcCHHHH
Confidence            234567789999999999999999999864

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-47  Score=310.99  Aligned_cols=211  Identities=19%  Similarity=0.289  Sum_probs=169.2

Q ss_pred             ccccceecccCceEEEEEEe-cCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeec----CCeeEEE
Q 039276           34 FSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSK----DDFKALI  106 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~----~~~~~lv  106 (263)
                      |+..+.||+|+||.||+|.. .+++.||+|.+....  ....+.+.+|++++++++||||+++++++.+    ....++|
T Consensus        11 ~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~iv   90 (270)
T d1t4ha_          11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV   90 (270)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEE
Confidence            46667899999999999994 568899999997653  3345678899999999999999999999864    3467999


Q ss_pred             EeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCC--ccccccCCCcccccc--------------------
Q 039276          107 LECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGH--STHLLLKEDQSLTQI--------------------  164 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--i~h~dlk~~nil~~~--------------------  164 (263)
                      |||+++|+|.+++..... +++..+..++.|++.||+|||+++  |+||||||+||++..                    
T Consensus        91 mE~~~~g~L~~~l~~~~~-~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~~~  169 (270)
T d1t4ha_          91 TELMTSGTLKTYLKRFKV-MKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASF  169 (270)
T ss_dssp             EECCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTS
T ss_pred             EeCCCCCcHHHHHhcccc-ccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccCCc
Confidence            999999999999987554 899999999999999999999998  999999999999632                    


Q ss_pred             --cccccccccCc-----------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccc
Q 039276          165 --QTLATISYMAP-----------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEH  231 (263)
Q Consensus       165 --~~~g~~~y~aP-----------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (263)
                        ...||+.|+||           |||||||++|||++|+.||..................+                  
T Consensus       170 ~~~~~GT~~Y~aPE~~~~~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~~------------------  231 (270)
T d1t4ha_         170 AKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP------------------  231 (270)
T ss_dssp             BEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCC------------------
T ss_pred             cCCcccCccccCHHHhCCCCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCCC------------------
Confidence              23689999999           99999999999999999986432211111111110000                  


Q ss_pred             ccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          232 FMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       232 ~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ...+..+++++.+++.+||+.||++|||++|+
T Consensus       232 ~~~~~~~~~~~~~li~~~l~~dp~~R~s~~el  263 (270)
T d1t4ha_         232 ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDL  263 (270)
T ss_dssp             GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             cccCccCCHHHHHHHHHHccCCHhHCcCHHHH
Confidence            01233456679999999999999999999874

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-47  Score=311.79  Aligned_cols=214  Identities=21%  Similarity=0.323  Sum_probs=171.2

Q ss_pred             ccccccceecccCceEEEEEEecCCceEEEEEeecC--CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQ--YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      +.|+..+.||+|+||.||+|+..  ..||||+++..  .....+.+.+|++++++++||||+++++++.+ +..++||||
T Consensus         8 ~~~~~~~~lG~G~fg~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~lv~Ey   84 (276)
T d1uwha_           8 GQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAIVTQW   84 (276)
T ss_dssp             TCCCCCSEEEECSSCEEEEEESS--SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred             ccEEEEEEEeeCCCcEEEEEEEC--CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cEEEEEEec
Confidence            45899999999999999999855  36999999755  34456788899999999999999999998754 467999999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-------------------------
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-------------------------  164 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-------------------------  164 (263)
                      +++|+|.+++......+++..+..++.|++.||+|||+++|+||||||+||+++.                         
T Consensus        85 ~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~~~~  164 (276)
T d1uwha_          85 CEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE  164 (276)
T ss_dssp             CCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTSSEEECCCCCSCC-----------
T ss_pred             CCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEcCCCCEEEccccceeeccccCCccccc
Confidence            9999999999776666899999999999999999999999999999999999432                         


Q ss_pred             cccccccccCc---------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccc
Q 039276          165 QTLATISYMAP---------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSRED  229 (263)
Q Consensus       165 ~~~g~~~y~aP---------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (263)
                      ...||+.|+||               |||||||++|||+||+.||....................               
T Consensus       165 ~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p---------------  229 (276)
T d1uwha_         165 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP---------------  229 (276)
T ss_dssp             -CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCC---------------
T ss_pred             ccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCC---------------
Confidence            23589999999               999999999999999999874321111111111110000               


Q ss_pred             ccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          230 EHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       230 ~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .....+..+++++.+++.+||+.||++|||++||
T Consensus       230 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i  263 (276)
T d1uwha_         230 DLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQI  263 (276)
T ss_dssp             CGGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             cchhccccchHHHHHHHHHHcCCCHhHCcCHHHH
Confidence            0011234567789999999999999999999864

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=3.9e-47  Score=320.31  Aligned_cols=215  Identities=18%  Similarity=0.203  Sum_probs=177.4

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      +.|+..+.||+|+||.||+|. ..+++.||||++..........+.+|++++++++||||+++++++.+.+..|+|||||
T Consensus        29 d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~  108 (352)
T d1koba_          29 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL  108 (352)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence            459999999999999999999 4579999999998775556677889999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc------------------------cc
Q 039276          111 PHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI------------------------QT  166 (263)
Q Consensus       111 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~------------------------~~  166 (263)
                      ++|+|.+++......+++..++.++.||+.||+|||++||+||||||+|||+..                        ..
T Consensus       109 ~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~~~~~  188 (352)
T d1koba_         109 SGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVT  188 (352)
T ss_dssp             CCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEEEE
T ss_pred             CCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccccCCCeEEEeecccceecCCCCceeec
Confidence            999999988766656999999999999999999999999999999999999541                        12


Q ss_pred             cccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccc
Q 039276          167 LATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT  234 (263)
Q Consensus       167 ~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (263)
                      .||+.|+||            |||||||++|||+||+.||...... ..+......                ........
T Consensus       189 ~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~-~~~~~i~~~----------------~~~~~~~~  251 (352)
T d1koba_         189 TATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL-ETLQNVKRC----------------DWEFDEDA  251 (352)
T ss_dssp             CSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH-HHHHHHHHC----------------CCCCCSST
T ss_pred             cCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhC----------------CCCCCccc
Confidence            578999999            9999999999999999998642111 111111110                00001112


Q ss_pred             hHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          235 KEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       235 ~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ...+++++.+|+.+||+.||.+|||++|+
T Consensus       252 ~~~~s~~~~~li~~~L~~dp~~R~s~~ei  280 (352)
T d1koba_         252 FSSVSPEAKDFIKNLLQKEPRKRLTVHDA  280 (352)
T ss_dssp             TTTSCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred             ccCCCHHHHHHHHHHccCChhHCcCHHHH
Confidence            34667789999999999999999998764

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.7e-47  Score=312.10  Aligned_cols=214  Identities=19%  Similarity=0.255  Sum_probs=174.7

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCC------CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeE
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY------GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKA  104 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~------~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~  104 (263)
                      ++|+..+.||+|+||.||+|.. .+|+.||||++....      ....+.+.+|+++++.++||||+++++++.+.+..|
T Consensus        10 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~   89 (293)
T d1jksa_          10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   89 (293)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence            5699999999999999999994 569999999997542      223677889999999999999999999999999999


Q ss_pred             EEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc--------------------
Q 039276          105 LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI--------------------  164 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~--------------------  164 (263)
                      +|||||++|+|.+++...+. +++..++.++.|++.||+|||+++++||||||+||+...                    
T Consensus        90 iv~E~~~gg~L~~~i~~~~~-l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~  168 (293)
T d1jksa_          90 LILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID  168 (293)
T ss_dssp             EEEECCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECT
T ss_pred             EEEEcCCCccccchhccccc-cchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhhhhhcC
Confidence            99999999999999987554 899999999999999999999999999999999998432                    


Q ss_pred             ------cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccc
Q 039276          165 ------QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLS  226 (263)
Q Consensus       165 ------~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (263)
                            ...||+.|+||            |||||||++|||++|+.||..... ...+......                
T Consensus       169 ~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~-~~~~~~i~~~----------------  231 (293)
T d1jksa_         169 FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK-QETLANVSAV----------------  231 (293)
T ss_dssp             TSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHTT----------------
T ss_pred             CCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCH-HHHHHHHHhc----------------
Confidence                  22578899999            999999999999999999864211 1111111110                


Q ss_pred             cccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          227 REDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       227 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ........+..+++++.+|+.+||+.||++|||++|+
T Consensus       232 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~ei  268 (293)
T d1jksa_         232 NYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDS  268 (293)
T ss_dssp             CCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred             CCCCCchhcCCCCHHHHHHHHHHccCChhHCcCHHHH
Confidence            0000011234567789999999999999999999864

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.6e-47  Score=307.43  Aligned_cols=211  Identities=20%  Similarity=0.294  Sum_probs=172.0

Q ss_pred             ccccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccC
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMP  111 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~  111 (263)
                      ..|+..+.||+|+||.||+|.+.++..||||++.... ...+.+.+|+++++.++||||+++++++.+.+..++||||++
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~   83 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME   83 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred             HHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCc-CcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecC
Confidence            3588999999999999999998888899999997653 345678999999999999999999999999899999999999


Q ss_pred             CCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc------------------------cc
Q 039276          112 HGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ------------------------TL  167 (263)
Q Consensus       112 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~------------------------~~  167 (263)
                      +|+|.+++......+++..+..++.|++.||+|||+++++||||||+||+.+.+                        ..
T Consensus        84 ~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~  163 (263)
T d1sm2a_          84 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK  163 (263)
T ss_dssp             TCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGGGCEEECSCC-----------------
T ss_pred             CCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeecCCCCeEecccchheeccCCCceeeccee
Confidence            999999988766668899999999999999999999999999999999995432                        24


Q ss_pred             ccccccCc------------chhhHHHHHHHHHhC-CCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccc
Q 039276          168 ATISYMAP------------DTYNFGIMIMETFSG-KKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT  234 (263)
Q Consensus       168 g~~~y~aP------------Dv~SlG~il~ell~g-~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (263)
                      ||+.|+||            |||||||++|||+|+ ++||... .....+...             ..      ..+...
T Consensus       164 gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~-~~~~~~~~i-------------~~------~~~~~~  223 (263)
T d1sm2a_         164 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR-SNSEVVEDI-------------ST------GFRLYK  223 (263)
T ss_dssp             -CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSC-CHHHHHHHH-------------HH------TCCCCC
T ss_pred             cCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCC-CHHHHHHHH-------------Hh------cCCCCC
Confidence            68889999            999999999999995 5554321 111111111             00      111223


Q ss_pred             hHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          235 KEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       235 ~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +..+++++.+++.+||+.||++|||++||
T Consensus       224 p~~~~~~l~~li~~cl~~~p~~Rps~~~i  252 (263)
T d1sm2a_         224 PRLASTHVYQIMNHCWKERPEDRPAFSRL  252 (263)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             ccccCHHHHHHHHHHccCCHhHCcCHHHH
Confidence            45667789999999999999999999874

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-47  Score=318.60  Aligned_cols=229  Identities=17%  Similarity=0.218  Sum_probs=174.9

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecC-CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQ-YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      ++|+..+.||+|+||.||+|. ..+++.||+|+++.. .....+.+.+|+.+++.++||||+++++++.+.+..|+||||
T Consensus         6 d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmEy   85 (322)
T d1s9ja_           6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH   85 (322)
T ss_dssp             GGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             cCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            359999999999999999999 456899999999765 334567788999999999999999999999999999999999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccC-CccccccCCCcccccc---------------------ccc
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFG-HSTHLLLKEDQSLTQI---------------------QTL  167 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~h~dlk~~nil~~~---------------------~~~  167 (263)
                      +++|+|.+++.+.+. +++..+..++.|++.||+|||++ +|+||||||+||+...                     ...
T Consensus        86 ~~gg~L~~~l~~~~~-l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~~  164 (322)
T d1s9ja_          86 MDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV  164 (322)
T ss_dssp             CTTEEHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHTC---C
T ss_pred             CCCCcHHHHHhhcCC-CCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCCCCEEEeeCCCccccCCCcccccc
Confidence            999999999987654 89999999999999999999975 8999999999999433                     347


Q ss_pred             ccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhh-------------------------h
Q 039276          168 ATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVN-------------------------D  210 (263)
Q Consensus       168 g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~-------------------------~  210 (263)
                      ||+.|+||            ||||+||++|||++|+.||......+........                         .
T Consensus       165 GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (322)
T d1s9ja_         165 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDS  244 (322)
T ss_dssp             CSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC-----------------------------
T ss_pred             CCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCccccccccccccccccc
Confidence            89999999            9999999999999999999643221110000000                         0


Q ss_pred             cCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          211 LLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ..................  ........+.++.+++.+||+.||.+|||++|+
T Consensus       245 ~~~~~~~~~~~~~~~~~~--~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~  295 (322)
T d1s9ja_         245 RPPMAIFELLDYIVNEPP--PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQL  295 (322)
T ss_dssp             -CCCCHHHHHHHHHTSCC--CCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred             ccchhHHHHHhhhhccCC--ccCccccCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence            000000011110000000  000112356789999999999999999999864

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.7e-47  Score=316.00  Aligned_cols=212  Identities=18%  Similarity=0.277  Sum_probs=172.7

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCCC---chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYG---GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~---~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      ..|+..+.||+|+||.||+|. ..+++.||||++.....   ...+.+.+|+++++.++||||+++++++.+.+..|+||
T Consensus        15 ~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~   94 (309)
T d1u5ra_          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM   94 (309)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             HhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEE
Confidence            459999999999999999998 45689999999976543   23456888999999999999999999999999999999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-------------------cccc
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-------------------QTLA  168 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-------------------~~~g  168 (263)
                      |||++|++..++.... .+++..+..++.|++.||+|||+++|+||||||+||+++.                   ...|
T Consensus        95 E~~~~g~l~~~~~~~~-~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~G  173 (309)
T d1u5ra_          95 EYCLGSASDLLEVHKK-PLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVG  173 (309)
T ss_dssp             ECCSEEHHHHHHHHTS-CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCS
T ss_pred             EecCCCchHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEECCCCCEEEeecccccccCCCCcccc
Confidence            9999999877666544 4899999999999999999999999999999999999543                   2368


Q ss_pred             cccccCc---------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccccc
Q 039276          169 TISYMAP---------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFM  233 (263)
Q Consensus       169 ~~~y~aP---------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (263)
                      |+.|+||               |||||||++|||++|+.||.....    ...+.         .+.....      ...
T Consensus       174 T~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~----~~~~~---------~i~~~~~------~~~  234 (309)
T d1u5ra_         174 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA----MSALY---------HIAQNES------PAL  234 (309)
T ss_dssp             CGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH----HHHHH---------HHHHSCC------CCC
T ss_pred             CccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCH----HHHHH---------HHHhCCC------CCC
Confidence            9999999               999999999999999999864211    11110         0110000      011


Q ss_pred             chHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          234 TKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       234 ~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .+..+++++.+|+.+||+.||++|||++|+
T Consensus       235 ~~~~~s~~~~~li~~~L~~dP~~Rpt~~el  264 (309)
T d1u5ra_         235 QSGHWSEYFRNFVDSCLQKIPQDRPTSEVL  264 (309)
T ss_dssp             SCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             CCCCCCHHHHHHHHHHCcCChhHCcCHHHH
Confidence            233566789999999999999999999864

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-47  Score=310.76  Aligned_cols=212  Identities=17%  Similarity=0.189  Sum_probs=164.5

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeec--CCeeEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSK--DDFKALI  106 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~lv  106 (263)
                      ++|+..+.||+|+||.||+|+ ..+|+.||+|.+....  ....+.+.+|++++++++||||+++++++.+  .+..|+|
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~iv   83 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV   83 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEE
T ss_pred             hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEE
Confidence            569999999999999999998 4568999999997663  2345678899999999999999999999864  4568999


Q ss_pred             EeccCCCCHhhhhhhC---CCcccHHHHHHHHHHHHHHHHHhccCC-----ccccccCCCcccccc--------------
Q 039276          107 LECMPHGSLGKCLSTS---NYILDFFQRLHIMIDVASAVEYLHFGH-----STHLLLKEDQSLTQI--------------  164 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~-----i~h~dlk~~nil~~~--------------  164 (263)
                      ||||++|+|.+++...   ...+++..++.++.|++.||+|||+++     |+||||||+||+++.              
T Consensus        84 mEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~  163 (269)
T d2java1          84 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI  163 (269)
T ss_dssp             EECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHH
T ss_pred             EecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceee
Confidence            9999999999998642   334899999999999999999999876     999999999999543              


Q ss_pred             ---------cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhc
Q 039276          165 ---------QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSAN  223 (263)
Q Consensus       165 ---------~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (263)
                               ...||+.|+||            |||||||++|||++|+.||...... ......            ....
T Consensus       164 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~-~~~~~i------------~~~~  230 (269)
T d2java1         164 LNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK-ELAGKI------------REGK  230 (269)
T ss_dssp             C-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHH------------HHTC
T ss_pred             cccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHH-HHHHHH------------HcCC
Confidence                     23689999999            9999999999999999998642110 111111            1111


Q ss_pred             ccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          224 LLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .       .+.+..+++++.+++.+||+.||++|||++||
T Consensus       231 ~-------~~~~~~~s~~l~~li~~~L~~dp~~Rps~~el  263 (269)
T d2java1         231 F-------RRIPYRYSDELNEIITRMLNLKDYHRPSVEEI  263 (269)
T ss_dssp             C-------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             C-------CCCCcccCHHHHHHHHHHcCCChhHCcCHHHH
Confidence            0       11234567789999999999999999999874

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=6.5e-47  Score=312.72  Aligned_cols=212  Identities=21%  Similarity=0.342  Sum_probs=171.7

Q ss_pred             ccccccceecccCceEEEEEEec-CC---ceEEEEEeecC-CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ-DG---MEVVVKGFNLQ-YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALI  106 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~-~~---~~v~vK~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv  106 (263)
                      ..|+..+.||+|+||+||+|... ++   ..||||.+... .....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus        26 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv  105 (299)
T d1jpaa_          26 SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMII  105 (299)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred             hhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEE
Confidence            56888999999999999999853 33   35788888655 334566789999999999999999999999999999999


Q ss_pred             EeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc---------------------
Q 039276          107 LECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ---------------------  165 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~---------------------  165 (263)
                      ||||++|+|.+++......+++.++..++.|++.||+|||+++++||||||+||+++.+                     
T Consensus       106 ~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~  185 (299)
T d1jpaa_         106 TEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDP  185 (299)
T ss_dssp             EECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC-------------
T ss_pred             EEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEECCCCcEEECCcccceEccCCCCcc
Confidence            99999999999988766668999999999999999999999999999999999995432                     


Q ss_pred             -------ccccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhccc
Q 039276          166 -------TLATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLL  225 (263)
Q Consensus       166 -------~~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (263)
                             ..||+.|+||            |||||||++|||+| |+.||......  .+.            ..+.    
T Consensus       186 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~--~~~------------~~i~----  247 (299)
T d1jpaa_         186 TYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ--DVI------------NAIE----  247 (299)
T ss_dssp             ----------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHH------------HHHH----
T ss_pred             eeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHH--HHH------------HHHH----
Confidence                   1357889999            99999999999998 89998643111  111            1111    


Q ss_pred             ccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          226 SREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       226 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                        ...+.+.+..+++++.+++.+||+.||++|||++||
T Consensus       248 --~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei  283 (299)
T d1jpaa_         248 --QDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQI  283 (299)
T ss_dssp             --TTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred             --cCCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHH
Confidence              111223455678889999999999999999999864

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=7.4e-47  Score=310.61  Aligned_cols=212  Identities=21%  Similarity=0.306  Sum_probs=173.1

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      ++|+..+.||+|+||.||+|.+ .+++.||||+++... ...+.+.+|+++++.++||||+++++++.+.+..+++|||+
T Consensus        17 ~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~   95 (287)
T d1opja_          17 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM   95 (287)
T ss_dssp             GGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred             HHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc-chHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEeecc
Confidence            3588899999999999999995 458899999987653 35677899999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhhC-CCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc------------------------
Q 039276          111 PHGSLGKCLSTS-NYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ------------------------  165 (263)
Q Consensus       111 ~~~~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~------------------------  165 (263)
                      ++|+|.+++... ...+++..+..++.|++.||+|||+++|+||||||+||+++..                        
T Consensus        96 ~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~~~~  175 (287)
T d1opja_          96 TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG  175 (287)
T ss_dssp             TTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSEEETT
T ss_pred             cCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEECCCCcEEEccccceeecCCCCceeecc
Confidence            999999998754 3448999999999999999999999999999999999995432                        


Q ss_pred             ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccccc
Q 039276          166 TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFM  233 (263)
Q Consensus       166 ~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (263)
                      ..|++.|+||            |||||||++|||++|..||........ +            ...+..      ..+.+
T Consensus       176 ~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~-~------------~~~i~~------~~~~~  236 (287)
T d1opja_         176 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-V------------YELLEK------DYRME  236 (287)
T ss_dssp             EEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH-H------------HHHHHT------TCCCC
T ss_pred             ccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHH-H------------HHHHhc------CCCCC
Confidence            2367889999            999999999999997777543211111 1            111111      11223


Q ss_pred             chHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          234 TKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       234 ~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .+..+++++.+++.+||+.||++|||++||
T Consensus       237 ~~~~~~~~l~~li~~cl~~dP~~Rps~~ei  266 (287)
T d1opja_         237 RPEGCPEKVYELMRACWQWNPSDRPSFAEI  266 (287)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             CCccchHHHHHHHHHHcCCCHhHCcCHHHH
Confidence            455677889999999999999999999864

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-46  Score=313.86  Aligned_cols=214  Identities=16%  Similarity=0.221  Sum_probs=174.5

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEecc
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECM  110 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~  110 (263)
                      ++|+..+.||+|+||+||+|.. .+++.||+|+++... .+...+.+|+++++.++||||+++++++.+.+..|+|||||
T Consensus         5 ~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~-~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~~   83 (321)
T d1tkia_           5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFI   83 (321)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEecC
Confidence            4699999999999999999994 568899999997663 34456789999999999999999999999999999999999


Q ss_pred             CCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc------------------------cc
Q 039276          111 PHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI------------------------QT  166 (263)
Q Consensus       111 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~------------------------~~  166 (263)
                      ++|+|.+++...+..+++.++..++.||+.||+|||+++|+||||||+||+...                        ..
T Consensus        84 ~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~~~~~  163 (321)
T d1tkia_          84 SGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLL  163 (321)
T ss_dssp             CCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEEE
T ss_pred             CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCCCceEEEEcccchhhccccCCccccc
Confidence            999999999876656899999999999999999999999999999999999532                        12


Q ss_pred             cccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccc
Q 039276          167 LATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT  234 (263)
Q Consensus       167 ~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (263)
                      .+++.|+||            |||||||++|+|++|+.||...... ..+...            ......    .....
T Consensus       164 ~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~-~~~~~i------------~~~~~~----~~~~~  226 (321)
T d1tkia_         164 FTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ-QIIENI------------MNAEYT----FDEEA  226 (321)
T ss_dssp             ESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHH------------HHTCCC----CCHHH
T ss_pred             ccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHH-HHHHHH------------HhCCCC----CChhh
Confidence            468889999            9999999999999999998642110 111111            111100    00011


Q ss_pred             hHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          235 KEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       235 ~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ...+++++.+|+.+||+.||++|||++|+
T Consensus       227 ~~~~s~~~~~li~~~L~~dp~~R~s~~ei  255 (321)
T d1tkia_         227 FKEISIEAMDFVDRLLVKERKSRMTASEA  255 (321)
T ss_dssp             HTTSCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred             ccCCCHHHHHHHHHHccCChhHCcCHHHH
Confidence            23567789999999999999999998764

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-46  Score=303.05  Aligned_cols=211  Identities=21%  Similarity=0.296  Sum_probs=176.2

Q ss_pred             ccccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccC
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMP  111 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~  111 (263)
                      ..|+..+.||+|+||.||+|++.+++.||||.++.... ..+.+.+|+.+++.++||||+++++++.+.+..++||||++
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~-~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~   82 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA   82 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSSS-CHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCT
T ss_pred             HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCcC-CHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccC
Confidence            35889999999999999999988888999999987643 45678999999999999999999999999899999999999


Q ss_pred             CCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc------------------------cc
Q 039276          112 HGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ------------------------TL  167 (263)
Q Consensus       112 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~------------------------~~  167 (263)
                      +|+|.+++......+++..++.++.|++.||+|||+++++||||||+||+.+..                        ..
T Consensus        83 ~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~  162 (258)
T d1k2pa_          83 NGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSK  162 (258)
T ss_dssp             TEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCCCCSC
T ss_pred             CCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEcCCCcEEECcchhheeccCCCceeecccC
Confidence            999999987766668999999999999999999999999999999999995432                        24


Q ss_pred             ccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccc
Q 039276          168 ATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT  234 (263)
Q Consensus       168 g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (263)
                      ||+.|+||            |||||||++|||+| |+.||...... . +...           +..       +.+.+.
T Consensus       163 ~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~-~-~~~~-----------i~~-------~~~~~~  222 (258)
T d1k2pa_         163 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS-E-TAEH-----------IAQ-------GLRLYR  222 (258)
T ss_dssp             CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHH-H-HHHH-----------HHT-------TCCCCC
T ss_pred             CCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHH-H-HHHH-----------HHh-------CCCCCC
Confidence            68889999            99999999999998 89998643211 1 1111           100       112233


Q ss_pred             hHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          235 KEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       235 ~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +..+++++.+++.+||+.||++|||++||
T Consensus       223 p~~~~~~l~~li~~cl~~dP~~RPt~~ei  251 (258)
T d1k2pa_         223 PHLASEKVYTIMYSCWHEKADERPTFKIL  251 (258)
T ss_dssp             CTTCCHHHHHHHHHTTCSSGGGSCCHHHH
T ss_pred             cccccHHHHHHHHHHccCCHhHCcCHHHH
Confidence            45667789999999999999999999874

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-46  Score=307.35  Aligned_cols=210  Identities=17%  Similarity=0.297  Sum_probs=169.8

Q ss_pred             cccccc-eecccCceEEEEEEec---CCceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           33 LFSESN-LISRGGFGSIYKAKIQ---DGMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        33 ~y~~~~-~lg~g~~g~v~~~~~~---~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      .|...+ +||+|+||.||+|.+.   ++..||||+++... ....+.+.+|++++++++||||+++++++.++ ..++||
T Consensus         9 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~-~~~lvm   87 (285)
T d1u59a_           9 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAE-ALMLVM   87 (285)
T ss_dssp             GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEEEE
T ss_pred             CeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeeccC-eEEEEE
Confidence            466666 4999999999999743   35579999997653 34567789999999999999999999998754 579999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-----------------------
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-----------------------  164 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-----------------------  164 (263)
                      ||+++|+|.+++......+++..+..++.|++.||+|||+++++||||||+||+++.                       
T Consensus        88 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~  167 (285)
T d1u59a_          88 EMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYT  167 (285)
T ss_dssp             ECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEEC
T ss_pred             EeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeeccCCceeeccchhhhcccccccccc
Confidence            999999999998766666999999999999999999999999999999999999432                       


Q ss_pred             ---cccccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccc
Q 039276          165 ---QTLATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSRE  228 (263)
Q Consensus       165 ---~~~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (263)
                         ...||+.|+||            |||||||++|||+| |+.||......  .+...            +.      .
T Consensus       168 ~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~--~~~~~------------i~------~  227 (285)
T d1u59a_         168 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EVMAF------------IE------Q  227 (285)
T ss_dssp             CCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH--HHHHH------------HH------T
T ss_pred             cccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHH--HHHHH------------HH------c
Confidence               22468889999            99999999999998 99998743211  11111            11      1


Q ss_pred             cccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          229 DEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       229 ~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +.+.+.+..+++++.+++.+||+.||++|||+.+|
T Consensus       228 ~~~~~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i  262 (285)
T d1u59a_         228 GKRMECPPECPPELYALMSDCWIYKWEDRPDFLTV  262 (285)
T ss_dssp             TCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHH
T ss_pred             CCCCCCCCcCCHHHHHHHHHHcCCCHhHCcCHHHH
Confidence            11223456778889999999999999999998764

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=2e-46  Score=307.00  Aligned_cols=213  Identities=15%  Similarity=0.240  Sum_probs=166.2

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCCC---chHHHHHHHHHHHhhcCCCcceeEeeEeecCC----ee
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYG---GAFKNLDVECNMMKIIRHQNLIKIISSCSKDD----FK  103 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~---~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~----~~  103 (263)
                      ++|+..+.||+|+||.||+|. ..+++.||||++.....   .....+.+|+++++.++||||+++++++.+..    ..
T Consensus         7 drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~   86 (277)
T d1o6ya_           7 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP   86 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred             ceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceE
Confidence            469999999999999999999 46799999999976532   33556889999999999999999999986543    47


Q ss_pred             EEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-------------------
Q 039276          104 ALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-------------------  164 (263)
Q Consensus       104 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-------------------  164 (263)
                      |+||||+++++|.+++...+. +++..+..++.|++.||+|||+++++||||||+||+...                   
T Consensus        87 ~lvmE~~~g~~L~~~~~~~~~-l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~~~  165 (277)
T d1o6ya_          87 YIVMEYVDGVTLRDIVHTEGP-MTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSG  165 (277)
T ss_dssp             EEEEECCCEEEHHHHHHHHCS-CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTSCEEECCCTTCEECC---
T ss_pred             EEEEECCCCCEehhhhcccCC-CCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCccccceeehhhhhhhhcccc
Confidence            999999999999998876654 899999999999999999999999999999999999432                   


Q ss_pred             -------cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccc
Q 039276          165 -------QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLL  225 (263)
Q Consensus       165 -------~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (263)
                             ...||+.|+||            |||||||++|||+||+.||......+ .+.....                
T Consensus       166 ~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~-~~~~~~~----------------  228 (277)
T d1o6ya_         166 NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS-VAYQHVR----------------  228 (277)
T ss_dssp             -------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHH----------------
T ss_pred             ccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHH-HHHHHHh----------------
Confidence                   23589999999            99999999999999999986421110 0110100                


Q ss_pred             ccccccccchHHHHHHHHHhhccccccCcCCCC-CccC
Q 039276          226 SREDEHFMTKEQCMSFVFNLAMECTVESPNQRI-NAKE  262 (263)
Q Consensus       226 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rp-t~~e  262 (263)
                      ............+++++.+++.+||+.||++|| |+++
T Consensus       229 ~~~~~~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~  266 (277)
T d1o6ya_         229 EDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAE  266 (277)
T ss_dssp             CCCCCGGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHH
T ss_pred             cCCCCCchhccCCCHHHHHHHHHHccCCHhHCHhHHHH
Confidence            000000112345677899999999999999999 6654

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-46  Score=305.17  Aligned_cols=204  Identities=21%  Similarity=0.308  Sum_probs=164.0

Q ss_pred             ceecccCceEEEEEEec---CCceEEEEEeecC--CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccCC
Q 039276           38 NLISRGGFGSIYKAKIQ---DGMEVVVKGFNLQ--YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMPH  112 (263)
Q Consensus        38 ~~lg~g~~g~v~~~~~~---~~~~v~vK~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~  112 (263)
                      ++||+|+||.||+|.+.   .++.||||+++..  .....+.+.+|+.++++++||||+++++++.+. ..++||||+++
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~~-~~~lvmE~~~~   91 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAEL   91 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESS-SEEEEEECCTT
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEeccC-CEEEEEEcCCC
Confidence            47999999999999853   2467999999654  333466789999999999999999999998654 57899999999


Q ss_pred             CCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc--------------------------cc
Q 039276          113 GSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI--------------------------QT  166 (263)
Q Consensus       113 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~--------------------------~~  166 (263)
                      |+|.+++..... +++..+..++.|++.||+|||+++++||||||+||+++.                          ..
T Consensus        92 g~L~~~l~~~~~-l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~~  170 (277)
T d1xbba_          92 GPLNKYLQQNRH-VKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG  170 (277)
T ss_dssp             EEHHHHHHHCTT-CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----
T ss_pred             CcHHHHHhhccC-CCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcccccCcccccchhhhhhcccccccccccccc
Confidence            999999987654 899999999999999999999999999999999999432                          12


Q ss_pred             cccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccccc
Q 039276          167 LATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFM  233 (263)
Q Consensus       167 ~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (263)
                      .||+.|+||            |||||||++|||++ |+.||.....  ..+            ...+..      ..+.+
T Consensus       171 ~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~--~~~------------~~~i~~------~~~~~  230 (277)
T d1xbba_         171 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG--SEV------------TAMLEK------GERMG  230 (277)
T ss_dssp             CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCH--HHH------------HHHHHT------TCCCC
T ss_pred             CCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCH--HHH------------HHHHHc------CCCCC
Confidence            578899999            99999999999998 8999864211  111            111111      11223


Q ss_pred             chHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          234 TKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       234 ~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .+..+++++.+++.+||+.||++|||+++|
T Consensus       231 ~p~~~~~~~~~li~~cl~~dp~~RPs~~~i  260 (277)
T d1xbba_         231 CPAGCPREMYDLMNLCWTYDVENRPGFAAV  260 (277)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred             CCcccCHHHHHHHHHHcCCCHhHCcCHHHH
Confidence            456678889999999999999999999764

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=7.3e-46  Score=302.97  Aligned_cols=214  Identities=20%  Similarity=0.240  Sum_probs=174.7

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCCCc---------hHHHHHHHHHHHhhcC-CCcceeEeeEeecC
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGG---------AFKNLDVECNMMKIIR-HQNLIKIISSCSKD  100 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~---------~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~  100 (263)
                      ++|+..+.||+|+||+||+|+ ..+++.||||++......         ..+.+.+|+.++++++ ||||+++++++.+.
T Consensus         3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~   82 (277)
T d1phka_           3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN   82 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred             ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccC
Confidence            359999999999999999999 467999999999765321         2345778999999996 99999999999999


Q ss_pred             CeeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc----------------
Q 039276          101 DFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI----------------  164 (263)
Q Consensus       101 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~----------------  164 (263)
                      +..|+||||+++|+|.+++...+. +++..+..++.||+.||+|||+++++||||||+||+.+.                
T Consensus        83 ~~~~ivmE~~~~g~L~~~l~~~~~-l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~  161 (277)
T d1phka_          83 TFFFLVFDLMKKGELFDYLTEKVT-LSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLD  161 (277)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred             cceEEEEEcCCCchHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEcCCCCeEEccchheeEcc
Confidence            999999999999999999987554 899999999999999999999999999999999999533                


Q ss_pred             ------cccccccccCc------------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhh
Q 039276          165 ------QTLATISYMAP------------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVV  220 (263)
Q Consensus       165 ------~~~g~~~y~aP------------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (263)
                            ...||+.|+||                  ||||+||++|||++|+.||...... ........           
T Consensus       162 ~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~-~~~~~i~~-----------  229 (277)
T d1phka_         162 PGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM-LMLRMIMS-----------  229 (277)
T ss_dssp             TTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHH-----------
T ss_pred             CCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHH-HHHHHHHh-----------
Confidence                  23578899999                  9999999999999999999642110 01111111           


Q ss_pred             hhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          221 SANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                           .......+....+++++.+++.+||+.||++|||++||
T Consensus       230 -----~~~~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~ei  267 (277)
T d1phka_         230 -----GNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEA  267 (277)
T ss_dssp             -----TCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred             -----CCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHH
Confidence                 11111122345678889999999999999999999874

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-46  Score=304.74  Aligned_cols=211  Identities=19%  Similarity=0.301  Sum_probs=169.7

Q ss_pred             ccccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccC
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMP  111 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~  111 (263)
                      +.|+..+.||+|+||.||+|.+.+++.||||+++... ...+.+.+|++++++++||||+++++++.+ +..++||||++
T Consensus        13 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~iv~Ey~~   90 (272)
T d1qpca_          13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYME   90 (272)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCT
T ss_pred             HHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCc-CCHHHHHHHHHHHHhCCCCCEeEEEeeecc-CCeEEEEEeCC
Confidence            4589999999999999999998878899999997653 345678999999999999999999998765 45799999999


Q ss_pred             CCCHhhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc------------------------cc
Q 039276          112 HGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI------------------------QT  166 (263)
Q Consensus       112 ~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~------------------------~~  166 (263)
                      +|+|.+++.... ..+++..+..++.|++.||+|||+++++||||||+||+++.                        ..
T Consensus        91 ~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~~~~~  170 (272)
T d1qpca_          91 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA  170 (272)
T ss_dssp             TCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTC
T ss_pred             CCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeeecccceeeccccceEEccCCcccccccc
Confidence            999999776433 23899999999999999999999999999999999999443                        23


Q ss_pred             cccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccc
Q 039276          167 LATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT  234 (263)
Q Consensus       167 ~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (263)
                      .||+.|+||            |||||||++|||+||..|+.........+...             .      ...+.+.
T Consensus       171 ~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i-------------~------~~~~~~~  231 (272)
T d1qpca_         171 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-------------E------RGYRMVR  231 (272)
T ss_dssp             CCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHH-------------H------TTCCCCC
T ss_pred             CCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHH-------------H------hcCCCCC
Confidence            578889999            99999999999999665543221111111111             0      1112233


Q ss_pred             hHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          235 KEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       235 ~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +..+++++.+++.+||+.||++|||++||
T Consensus       232 p~~~~~~l~~li~~cl~~~P~~Rpt~~ei  260 (272)
T d1qpca_         232 PDNCPEELYQLMRLCWKERPEDRPTFDYL  260 (272)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             cccChHHHHHHHHHHcCCCHhHCcCHHHH
Confidence            45677889999999999999999999874

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.6e-46  Score=309.88  Aligned_cols=206  Identities=19%  Similarity=0.209  Sum_probs=172.9

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecC---CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQ---YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      ++|+..+.||+|+||.||+|+ ..+++.||+|++...   .....+.+.+|+.+++.++||||+++++++.+....|+||
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~   84 (337)
T d1o6la_           5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM   84 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccce
Confidence            459999999999999999999 467999999999754   2345677889999999999999999999999999999999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-----------------------
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-----------------------  164 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-----------------------  164 (263)
                      ||+++|+|.+++...+. +++..++.++.|++.||+|||+++++||||||+||+++.                       
T Consensus        85 ey~~gg~L~~~~~~~~~-~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~~~~  163 (337)
T d1o6la_          85 EYANGGELFFHLSRERV-FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMK  163 (337)
T ss_dssp             ECCTTCBHHHHHHHHSC-CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCBC
T ss_pred             eccCCCchhhhhhcccC-CcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEecCCCCEEEeecccccccccCCcccc
Confidence            99999999999987655 899999999999999999999999999999999999433                       


Q ss_pred             cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccc
Q 039276          165 QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHF  232 (263)
Q Consensus       165 ~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (263)
                      ...||+.|+||            |||||||++|||++|+.||...... ..+.....                    ...
T Consensus       164 ~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~-~~~~~i~~--------------------~~~  222 (337)
T d1o6la_         164 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-RLFELILM--------------------EEI  222 (337)
T ss_dssp             CCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHH--------------------CCC
T ss_pred             cceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHH-HHHHHHhc--------------------CCC
Confidence            23689999999            9999999999999999998642110 01111100                    011


Q ss_pred             cchHHHHHHHHHhhccccccCcCCCCC
Q 039276          233 MTKEQCMSFVFNLAMECTVESPNQRIN  259 (263)
Q Consensus       233 ~~~~~~~~~l~~l~~~cl~~~p~~Rpt  259 (263)
                      ..+..+++++.+|+.+||+.||++||+
T Consensus       223 ~~p~~~s~~~~dli~~~L~~dP~~R~~  249 (337)
T d1o6la_         223 RFPRTLSPEAKSLLAGLLKKDPKQRLG  249 (337)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSTTTSTT
T ss_pred             CCCccCCHHHHHHHHhhccCCchhhcc
Confidence            234567788999999999999999996

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-45  Score=308.42  Aligned_cols=213  Identities=21%  Similarity=0.319  Sum_probs=169.8

Q ss_pred             ccccccceecccCceEEEEEEecC-C-----ceEEEEEeecC-CCchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCee
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQD-G-----MEVVVKGFNLQ-YGGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFK  103 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~-~-----~~v~vK~~~~~-~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~  103 (263)
                      ++|+..+.||+|+||+||+|++.. +     ..||+|.+... .......+.+|+.+++++ +||||+++++++.+.+..
T Consensus        37 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~  116 (325)
T d1rjba_          37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPI  116 (325)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeE
Confidence            568999999999999999998532 2     36899998654 334566788999999988 899999999999999999


Q ss_pred             EEEEeccCCCCHhhhhhhCCC----------------------cccHHHHHHHHHHHHHHHHHhccCCccccccCCCccc
Q 039276          104 ALILECMPHGSLGKCLSTSNY----------------------ILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSL  161 (263)
Q Consensus       104 ~lv~e~~~~~~L~~~l~~~~~----------------------~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil  161 (263)
                      ++|||||++|+|.+++.....                      .+++..++.++.|++.||+|||+++|+||||||+||+
T Consensus       117 ~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~Nil  196 (325)
T d1rjba_         117 YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVL  196 (325)
T ss_dssp             EEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEE
T ss_pred             EEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCchhccc
Confidence            999999999999999975432                      2788889999999999999999999999999999999


Q ss_pred             ccc-------------------------cccccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCch
Q 039276          162 TQI-------------------------QTLATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMT  203 (263)
Q Consensus       162 ~~~-------------------------~~~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~  203 (263)
                      .+.                         ...||+.|+||            |||||||++|||+| |+.||....... .
T Consensus       197 l~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~-~  275 (325)
T d1rjba_         197 VTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA-N  275 (325)
T ss_dssp             EETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-H
T ss_pred             cccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHHH-H
Confidence            432                         22468899999            99999999999998 899986432221 1


Q ss_pred             hhhHhhhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          204 LKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +....            ..      ..+.+.+..+++++.+|+.+||+.||++|||++||
T Consensus       276 ~~~~~------------~~------~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei  317 (325)
T d1rjba_         276 FYKLI------------QN------GFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNL  317 (325)
T ss_dssp             HHHHH------------HT------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             HHHHH------------hc------CCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence            11111            11      11223455677889999999999999999999875

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-45  Score=304.89  Aligned_cols=210  Identities=16%  Similarity=0.248  Sum_probs=170.9

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecC---CCchHHHHHHHHHHHh-hcCCCcceeEeeEeecCCeeEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQ---YGGAFKNLDVECNMMK-IIRHQNLIKIISSCSKDDFKALI  106 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~---~~~~~~~~~~e~~~l~-~~~h~~i~~~~~~~~~~~~~~lv  106 (263)
                      ++|+..+.||+|+||+||+|+ ..+++.||||++...   .......+..|..++. .++||||+++++++.+.+..|+|
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv   81 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV   81 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence            459999999999999999999 456999999999754   2334455666776655 68999999999999999999999


Q ss_pred             EeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc----------------------
Q 039276          107 LECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI----------------------  164 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~----------------------  164 (263)
                      |||+++|+|.+++..... +++..+..++.||+.||+|||+++++||||||+||+.+.                      
T Consensus        82 mEy~~~g~L~~~i~~~~~-~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~~~  160 (320)
T d1xjda_          82 MEYLNGGDLMYHIQSCHK-FDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT  160 (320)
T ss_dssp             EECCTTCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCB
T ss_pred             EeecCCCcHHHHhhccCC-CCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeecCCCceeccccchhhhcccccccc
Confidence            999999999999987654 899999999999999999999999999999999999433                      


Q ss_pred             -cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccccc
Q 039276          165 -QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEH  231 (263)
Q Consensus       165 -~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (263)
                       ...||+.|+||            |||||||++|||++|+.||...... ..+...                ..    ..
T Consensus       161 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~-~~~~~i----------------~~----~~  219 (320)
T d1xjda_         161 NTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE-ELFHSI----------------RM----DN  219 (320)
T ss_dssp             CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHH----------------HH----CC
T ss_pred             cccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHH-HHHHHH----------------Hc----CC
Confidence             23689999999            9999999999999999998632110 001100                00    01


Q ss_pred             ccchHHHHHHHHHhhccccccCcCCCCCcc-CC
Q 039276          232 FMTKEQCMSFVFNLAMECTVESPNQRINAK-EM  263 (263)
Q Consensus       232 ~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~-ev  263 (263)
                      +..+..+++++.+|+.+||+.||++|||+. ||
T Consensus       220 ~~~p~~~s~~~~dli~~~L~~dP~~R~s~~~~l  252 (320)
T d1xjda_         220 PFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDI  252 (320)
T ss_dssp             CCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCG
T ss_pred             CCCCccCCHHHHHHHHHhcccCCCCCcCHHHHH
Confidence            123456678899999999999999999985 43

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.4e-45  Score=299.16  Aligned_cols=212  Identities=22%  Similarity=0.351  Sum_probs=171.3

Q ss_pred             cccccceecccCceEEEEEEecC-C----ceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEE
Q 039276           33 LFSESNLISRGGFGSIYKAKIQD-G----MEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALI  106 (263)
Q Consensus        33 ~y~~~~~lg~g~~g~v~~~~~~~-~----~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv  106 (263)
                      .|+..++||+|+||.||+|.+.. +    ..||||++.... ......+.+|++++++++||||+++++++.+.+..+++
T Consensus         8 ~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~v   87 (283)
T d1mqba_           8 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMII   87 (283)
T ss_dssp             TEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred             HeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEEE
Confidence            48889999999999999998543 2    469999997653 33455788999999999999999999999999999999


Q ss_pred             EeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc---------------------
Q 039276          107 LECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ---------------------  165 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~---------------------  165 (263)
                      |||+.++++.+++......+++..+..++.|++.||+|||+++++||||||+||+++.+                     
T Consensus        88 ~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~  167 (283)
T d1mqba_          88 TEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAT  167 (283)
T ss_dssp             EECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC-----------
T ss_pred             EEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhccccccccCccccceEEECCCCeEEEcccchhhcccCCCccc
Confidence            99999999999888776669999999999999999999999999999999999995432                     


Q ss_pred             -----ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccc
Q 039276          166 -----TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSRE  228 (263)
Q Consensus       166 -----~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (263)
                           ..||+.|+||            |||||||++|||+++..|+.........+             ..+.      .
T Consensus       168 ~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~-------------~~i~------~  228 (283)
T d1mqba_         168 YTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVM-------------KAIN------D  228 (283)
T ss_dssp             ------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH-------------HHHH------T
T ss_pred             eEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHHHH-------------HHHh------c
Confidence                 2468889999            99999999999999766654221111111             1111      1


Q ss_pred             cccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          229 DEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       229 ~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ..+.+.+..+++++.+++.+||+.||++|||++||
T Consensus       229 ~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ei  263 (283)
T d1mqba_         229 GFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADI  263 (283)
T ss_dssp             TCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred             cCCCCCchhhHHHHHHHHHHHCcCCHhHCcCHHHH
Confidence            12223455677889999999999999999999874

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.3e-45  Score=298.03  Aligned_cols=211  Identities=19%  Similarity=0.266  Sum_probs=170.9

Q ss_pred             ccccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEeccC
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILECMP  111 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~  111 (263)
                      ++|+..+.||+|+||+||+|.+.++.+||||+++... ...+.+.+|+.++++++|+||+++++++.+. ..++||||++
T Consensus        17 ~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~-~~~lv~Ey~~   94 (285)
T d1fmka3          17 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMS   94 (285)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSS-SCEEEECCCT
T ss_pred             HHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECccc-CCHHHHHHHHHHHHhcccCCEeEEEEEEecC-CeEEEEEecC
Confidence            4599999999999999999998878899999997553 3557899999999999999999999998654 5789999999


Q ss_pred             CCCHhhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc------------------------c
Q 039276          112 HGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ------------------------T  166 (263)
Q Consensus       112 ~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~------------------------~  166 (263)
                      +|+|..++.... ..+++.++..++.||+.||+|||..+++||||||+||+++.+                        .
T Consensus        95 ~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~  174 (285)
T d1fmka3          95 KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA  174 (285)
T ss_dssp             TCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC-------------
T ss_pred             CCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEECCCCcEEEcccchhhhccCCCceeeccc
Confidence            999998887532 348999999999999999999999999999999999995432                        2


Q ss_pred             cccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccc
Q 039276          167 LATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMT  234 (263)
Q Consensus       167 ~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (263)
                      .||+.|+||            |||||||++|||++|..|+.........+....             .      ..+.+.
T Consensus       175 ~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~-------------~------~~~~~~  235 (285)
T d1fmka3         175 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE-------------R------GYRMPC  235 (285)
T ss_dssp             -CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH-------------T------TCCCCC
T ss_pred             cccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHH-------------h------cCCCCC
Confidence            468889999            999999999999997666543222111111111             0      112234


Q ss_pred             hHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          235 KEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       235 ~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +..+++++.+++.+||+.||++|||+++|
T Consensus       236 ~~~~~~~l~~li~~cl~~dP~~Rps~~~i  264 (285)
T d1fmka3         236 PPECPESLHDLMCQCWRKEPEERPTFEYL  264 (285)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             CcccCHHHHHHHHHHcccCHhHCcCHHHH
Confidence            55677889999999999999999999874

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=4.9e-45  Score=303.44  Aligned_cols=205  Identities=21%  Similarity=0.224  Sum_probs=170.8

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecC---CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQ---YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      .+|+..+.||+|+||+||+|+. .+|+.||||++...   .....+.+.+|+.+++.++||||+++++++.+.+..|+||
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm   83 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   83 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence            4599999999999999999994 56999999999754   2345677889999999999999999999999999999999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc--------------------ccc
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI--------------------QTL  167 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~--------------------~~~  167 (263)
                      ||+++|+|..++..... +++..+..++.|++.||+|||+++|+||||||+||+++.                    ...
T Consensus        84 E~~~gg~l~~~~~~~~~-~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~  162 (316)
T d1fota_          84 DYIEGGELFSLLRKSQR-FPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLC  162 (316)
T ss_dssp             CCCCSCBHHHHHHHTSS-CCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCCC
T ss_pred             eecCCcccccccccccc-ccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEcCCCCEEEecCccceEecccccccc
Confidence            99999999999887655 788888999999999999999999999999999999543                    236


Q ss_pred             ccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccch
Q 039276          168 ATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTK  235 (263)
Q Consensus       168 g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (263)
                      ||+.|+||            |||||||++|||++|+.||..... ...+...            ...        ....+
T Consensus       163 Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~-~~~~~~i------------~~~--------~~~~p  221 (316)
T d1fota_         163 GTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT-MKTYEKI------------LNA--------ELRFP  221 (316)
T ss_dssp             SCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH-HHHHHHH------------HHC--------CCCCC
T ss_pred             CcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCH-HHHHHHH------------HcC--------CCCCC
Confidence            89999999            999999999999999999864210 0111111            100        11224


Q ss_pred             HHHHHHHHHhhccccccCcCCCC
Q 039276          236 EQCMSFVFNLAMECTVESPNQRI  258 (263)
Q Consensus       236 ~~~~~~l~~l~~~cl~~~p~~Rp  258 (263)
                      ..+++++.+++.+||+.||++|+
T Consensus       222 ~~~s~~~~~li~~~L~~dp~~R~  244 (316)
T d1fota_         222 PFFNEDVKDLLSRLITRDLSQRL  244 (316)
T ss_dssp             TTSCHHHHHHHHHHTCSCTTTCT
T ss_pred             CCCCHHHHHHHHHHhhhCHHhcc
Confidence            45677899999999999999997

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6e-45  Score=305.21  Aligned_cols=214  Identities=15%  Similarity=0.161  Sum_probs=166.4

Q ss_pred             ccccccc-eecccCceEEEEEE-ecCCceEEEEEeecCCCchHHHHHHHHHHHhh-cCCCcceeEeeEeec----CCeeE
Q 039276           32 FLFSESN-LISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKI-IRHQNLIKIISSCSK----DDFKA  104 (263)
Q Consensus        32 ~~y~~~~-~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~-~~h~~i~~~~~~~~~----~~~~~  104 (263)
                      +.|...+ .||+|+||.||+|+ ..+++.||||+++..     ....+|++++.+ .+||||+++++++.+    ....|
T Consensus        11 ~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~-----~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~   85 (335)
T d2ozaa1          11 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL   85 (335)
T ss_dssp             GTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             cCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc-----HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEE
Confidence            4588764 69999999999999 467899999998643     456789988655 489999999999865    35689


Q ss_pred             EEEeccCCCCHhhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-------------------
Q 039276          105 LILECMPHGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-------------------  164 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-------------------  164 (263)
                      +|||||++|+|.+++...+ ..+++..++.++.|++.||+|||+++++||||||+||+...                   
T Consensus        86 ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~  165 (335)
T d2ozaa1          86 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT  165 (335)
T ss_dssp             EEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEECC
T ss_pred             EEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCccccccccccccccccccccccccccceeeecc
Confidence            9999999999999997643 45899999999999999999999999999999999999532                   


Q ss_pred             ------cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccc
Q 039276          165 ------QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLS  226 (263)
Q Consensus       165 ------~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (263)
                            ...||+.|+||            |||||||++|+|+||+.||........ ...+.            ......
T Consensus       166 ~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~-~~~~~------------~~i~~~  232 (335)
T d2ozaa1         166 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI-SPGMK------------TRIRMG  232 (335)
T ss_dssp             CCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC---------------------CCCSC
T ss_pred             CCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHH-HHHHH------------HHHhcC
Confidence                  22589999999            999999999999999999964321111 00000            000000


Q ss_pred             cccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          227 REDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       227 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ......+....+++++.+|+.+||+.||++|||+.|+
T Consensus       233 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~ei  269 (335)
T d2ozaa1         233 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEF  269 (335)
T ss_dssp             SSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred             CCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHH
Confidence            0000111235678889999999999999999999764

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-44  Score=299.69  Aligned_cols=230  Identities=19%  Similarity=0.191  Sum_probs=169.6

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEe
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      ++|+..+.||+|+||+||+|. ..+++.||||+++...  ....+.+.+|++++++++||||+++++++.+....|+|||
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e   81 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   81 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence            469999999999999999999 4678999999996553  2346778899999999999999999999999999999999


Q ss_pred             ccCCCCHhhhh-hhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-----------------------
Q 039276          109 CMPHGSLGKCL-STSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-----------------------  164 (263)
Q Consensus       109 ~~~~~~L~~~l-~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-----------------------  164 (263)
                      |+.+ ++.+++ ......+++..+..++.|++.||+|||+++|+||||||+||+.+.                       
T Consensus        82 ~~~~-~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~~~~  160 (298)
T d1gz8a_          82 FLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT  160 (298)
T ss_dssp             CCSE-EHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCTT
T ss_pred             ecCC-chhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeecccCcceeccCCcceeccCCcccce
Confidence            9976 444444 344455899999999999999999999999999999999999532                       


Q ss_pred             cccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcC--CCchhhhhhhcc--ccc
Q 039276          165 QTLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLL--PNSVMKVVSANL--LSR  227 (263)
Q Consensus       165 ~~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~  227 (263)
                      ...||+.|+||             |||||||++|+|++|+.||...... ..+........  .+..........  ...
T Consensus       161 ~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  239 (298)
T d1gz8a_         161 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTPDEVVWPGVTSMPDYKPS  239 (298)
T ss_dssp             CCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCTTTSTTGGGSTTCCTT
T ss_pred             eecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHH-HHHHHHHHhcCCCchhhccccccccccccc
Confidence            22689999999             9999999999999999999643211 11111111110  111100000000  000


Q ss_pred             --cccc---ccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          228 --EDEH---FMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       228 --~~~~---~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                        ....   ......+++++.+|+.+||+.||++|||++|+
T Consensus       240 ~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~el  280 (298)
T d1gz8a_         240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA  280 (298)
T ss_dssp             SCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred             cccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHH
Confidence              0000   00113456789999999999999999999864

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.8e-45  Score=297.18  Aligned_cols=211  Identities=20%  Similarity=0.302  Sum_probs=170.1

Q ss_pred             ccccccceecccCceEEEEEEecC----CceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQD----GMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALI  106 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~----~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv  106 (263)
                      ++|+..+.||+|+||.||+|+...    +..||||.+.... ....+.+.+|++++++++||||+++++++.+ +..++|
T Consensus         7 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~~iv   85 (273)
T d1mp8a_           7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWII   85 (273)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-SSCEEE
T ss_pred             HHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CeEEEE
Confidence            469999999999999999998532    3568888886543 3345678899999999999999999999864 568999


Q ss_pred             EeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc----------------------
Q 039276          107 LECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI----------------------  164 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~----------------------  164 (263)
                      |||+++|+|.+++......+++..+..++.|++.||+|||+++++||||||+||+.+.                      
T Consensus        86 ~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~~~~  165 (273)
T d1mp8a_          86 MELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYK  165 (273)
T ss_dssp             EECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC--------------
T ss_pred             EEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecCCCcEEEccchhheeccCCccee
Confidence            9999999999988776666899999999999999999999999999999999999433                      


Q ss_pred             --cccccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccccc
Q 039276          165 --QTLATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSRED  229 (263)
Q Consensus       165 --~~~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (263)
                        ...||+.|+||            |||||||++|||++ |..||...... ..+....                   ..
T Consensus       166 ~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~-~~~~~i~-------------------~~  225 (273)
T d1mp8a_         166 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-DVIGRIE-------------------NG  225 (273)
T ss_dssp             -----CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-GHHHHHH-------------------TT
T ss_pred             ccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHH-HHHHHHH-------------------cC
Confidence              23568899999            99999999999998 89998643211 1111110                   11


Q ss_pred             ccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          230 EHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       230 ~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .+.+.+..+++++.+++.+||+.||++|||++||
T Consensus       226 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei  259 (273)
T d1mp8a_         226 ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL  259 (273)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHH
Confidence            1223456778889999999999999999999874

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.4e-44  Score=306.04  Aligned_cols=210  Identities=18%  Similarity=0.189  Sum_probs=167.6

Q ss_pred             ccccccceecccCceEEEEEEe-cCCceEEEEEeecCC---CchHHHHHH---HHHHHhhcCCCcceeEeeEeecCCeeE
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY---GGAFKNLDV---ECNMMKIIRHQNLIKIISSCSKDDFKA  104 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~---~~~~~~~~~---e~~~l~~~~h~~i~~~~~~~~~~~~~~  104 (263)
                      ++|+..+.||+|+||.||+|+. .+|+.||||++....   ......+.+   ++++++.++||||+++++++.+.+..|
T Consensus         4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~   83 (364)
T d1omwa3           4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS   83 (364)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred             HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEE
Confidence            4599999999999999999994 569999999996542   112223333   466777888999999999999999999


Q ss_pred             EEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc--------------------
Q 039276          105 LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI--------------------  164 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~--------------------  164 (263)
                      +||||+++|+|.+++..... +++..+..++.||+.||+|||+++++||||||+|||++.                    
T Consensus        84 ivmE~~~gg~L~~~l~~~~~-~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~~~  162 (364)
T d1omwa3          84 FILDLMNGGDLHYHLSQHGV-FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP  162 (364)
T ss_dssp             EEECCCCSCBHHHHHHHHCS-CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSSCEEECCCTTCEECSSSCC
T ss_pred             EEEEecCCCcHHHHHHhccc-ccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEcCCCcEEEeeeceeeecCCCcc
Confidence            99999999999999987654 889999999999999999999999999999999999543                    


Q ss_pred             -cccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccc
Q 039276          165 -QTLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDE  230 (263)
Q Consensus       165 -~~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (263)
                       ...||+.|+||             |||||||++|||+||+.||......+.  ...            .....    ..
T Consensus       163 ~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~--~~~------------~~~~~----~~  224 (364)
T d1omwa3         163 HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--HEI------------DRMTL----TM  224 (364)
T ss_dssp             CSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCH--HHH------------HHHSS----SC
T ss_pred             cccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHH--HHH------------HHhcc----cC
Confidence             23689999999             999999999999999999975322211  111            11100    01


Q ss_pred             cccchHHHHHHHHHhhccccccCcCCCCCc
Q 039276          231 HFMTKEQCMSFVFNLAMECTVESPNQRINA  260 (263)
Q Consensus       231 ~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~  260 (263)
                      ....+..+++++.+++.+||+.||++|||.
T Consensus       225 ~~~~~~~~s~~~~~li~~~L~~dP~~R~t~  254 (364)
T d1omwa3         225 AVELPDSFSPELRSLLEGLLQRDVNRRLGC  254 (364)
T ss_dssp             CCCCCSSSCHHHHHHHHHHTCSSTTTSTTT
T ss_pred             CCCCCCCCCHHHHHHHHHHcccCHHHhCCC
Confidence            112234567789999999999999999994

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=2.5e-44  Score=295.83  Aligned_cols=230  Identities=18%  Similarity=0.169  Sum_probs=173.7

Q ss_pred             ccccccceecccCceEEEEEEecCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      ++|+..+.||+|+||+||+|...+++.||||++....  ....+.+.+|+.+++.++||||+++++++.+.+..++++|+
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~   81 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence            4699999999999999999998889999999997653  23367888999999999999999999999999999999999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------c
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------T  166 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------~  166 (263)
                      +.++.+..+.... ..+++..+..++.|++.||+|||+++|+||||||+||+++.+                       .
T Consensus        82 ~~~~~~~~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~  160 (286)
T d1ob3a_          82 LDQDLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHE  160 (286)
T ss_dssp             CSEEHHHHHHTST-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--------
T ss_pred             ehhhhHHHHHhhc-CCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEcCCCCEEecccccceecccCcccccee
Confidence            9886666665544 459999999999999999999999999999999999995332                       2


Q ss_pred             cccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhh---------hcc
Q 039276          167 LATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVS---------ANL  224 (263)
Q Consensus       167 ~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~  224 (263)
                      .|++.|+||             |||||||+++||++|+.||...... ..+.................         ...
T Consensus       161 ~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (286)
T d1ob3a_         161 IVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA-DQLMRIFRILGTPNSKNWPNVTELPKYDPNFT  239 (286)
T ss_dssp             -CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCC
T ss_pred             cccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHH-HHHHHHHHhhCCCChhhccchhhhhhcccccc
Confidence            578889999             9999999999999999999643211 11111111111110000000         000


Q ss_pred             cccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          225 LSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       225 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .............+++++.+++.+||+.||++|||++|+
T Consensus       240 ~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~el  278 (286)
T d1ob3a_         240 VYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQA  278 (286)
T ss_dssp             CCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred             cccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHH
Confidence            000000111234566789999999999999999999874

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-44  Score=293.70  Aligned_cols=209  Identities=22%  Similarity=0.322  Sum_probs=167.4

Q ss_pred             ccccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeec-CCeeEEEEecc
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSK-DDFKALILECM  110 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~lv~e~~  110 (263)
                      ++|+..+.||+|+||.||+|.+. +.+||||+++..  ...+.+.+|++++++++||||+++++++.+ .+..++||||+
T Consensus         7 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~i~~~--~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~   83 (262)
T d1byga_           7 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM   83 (262)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCC
T ss_pred             HHeEEeEEEecCCCeEEEEEEEC-CeEEEEEEECcH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEecc
Confidence            34888999999999999999986 789999999754  345778899999999999999999998854 45689999999


Q ss_pred             CCCCHhhhhhhCC-CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc--------------------cccc
Q 039276          111 PHGSLGKCLSTSN-YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ--------------------TLAT  169 (263)
Q Consensus       111 ~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~--------------------~~g~  169 (263)
                      ++|+|.+++.... ..+++..+..++.|++.||+|||+.+++||||||+||+.+..                    ..++
T Consensus        84 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~~~~~~~  163 (262)
T d1byga_          84 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP  163 (262)
T ss_dssp             TTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC------------CC
T ss_pred             CCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhheecCCCCEeecccccceecCCCCcccccc
Confidence            9999999997543 238999999999999999999999999999999999995432                    2568


Q ss_pred             ccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccccchH
Q 039276          170 ISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHFMTKE  236 (263)
Q Consensus       170 ~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (263)
                      ..|+||            |||||||++|||+| |+.||......  .+....            .      ...+.+.+.
T Consensus       164 ~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~--~~~~~i------------~------~~~~~~~~~  223 (262)
T d1byga_         164 VKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVPRV------------E------KGYKMDAPD  223 (262)
T ss_dssp             TTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG--GHHHHH------------T------TTCCCCCCT
T ss_pred             ccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHH--HHHHHH------------H------cCCCCCCCc
Confidence            889999            99999999999998 78886532111  111111            0      112233455


Q ss_pred             HHHHHHHHhhccccccCcCCCCCccCC
Q 039276          237 QCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       237 ~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .+++++.+++.+||+.||++|||+.||
T Consensus       224 ~~~~~~~~li~~cl~~dP~~Rps~~~l  250 (262)
T d1byga_         224 GCPPAVYEVMKNCWHLDAAMRPSFLQL  250 (262)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             cCCHHHHHHHHHHcccCHhHCcCHHHH
Confidence            667789999999999999999999764

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.4e-44  Score=303.15  Aligned_cols=212  Identities=18%  Similarity=0.187  Sum_probs=174.8

Q ss_pred             cccccccccceecccCceEEEEEEe-cCCceEEEEEeecC---CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeE
Q 039276           29 SGLFLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQ---YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKA  104 (263)
Q Consensus        29 ~~~~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~  104 (263)
                      ...++|+..+.||+|+||.||+|.. .+|+.||||++...   .....+.+.+|+.+++.++||||+++++++.+....+
T Consensus        38 ~~ld~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~  117 (350)
T d1rdqe_          38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLY  117 (350)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred             CCccCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccccccccc
Confidence            3346799999999999999999994 57999999999754   2345667889999999999999999999999999999


Q ss_pred             EEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc--------------------
Q 039276          105 LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI--------------------  164 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~--------------------  164 (263)
                      +++||+.+|+|..++...+. +++..+..++.||+.||.|||+++|+||||||+|||++.                    
T Consensus       118 ~v~e~~~~g~l~~~l~~~~~-l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~~~  196 (350)
T d1rdqe_         118 MVMEYVAGGEMFSHLRRIGR-FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW  196 (350)
T ss_dssp             EEEECCTTCBHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBC
T ss_pred             cccccccccchhhhHhhcCC-CCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccCCCCCEEeeeceeeeecccccc
Confidence            99999999999999977654 899999999999999999999999999999999999543                    


Q ss_pred             cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccccccc
Q 039276          165 QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSREDEHF  232 (263)
Q Consensus       165 ~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (263)
                      ...||+.|+||            |||||||++|||+||+.||...    ......         ..+...        ..
T Consensus       197 ~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~----~~~~~~---------~~i~~~--------~~  255 (350)
T d1rdqe_         197 TLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD----QPIQIY---------EKIVSG--------KV  255 (350)
T ss_dssp             CCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS----SHHHHH---------HHHHHC--------CC
T ss_pred             cccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCc----CHHHHH---------HHHhcC--------CC
Confidence            23589999999            9999999999999999998632    111100         001000        11


Q ss_pred             cchHHHHHHHHHhhccccccCcCCCC-----CccC
Q 039276          233 MTKEQCMSFVFNLAMECTVESPNQRI-----NAKE  262 (263)
Q Consensus       233 ~~~~~~~~~l~~l~~~cl~~~p~~Rp-----t~~e  262 (263)
                      ..+..+++++.+++.+||+.||.+|+     |++|
T Consensus       256 ~~p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~e  290 (350)
T d1rdqe_         256 RFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND  290 (350)
T ss_dssp             CCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHH
T ss_pred             CCCccCCHHHHHHHHHHhhhCHHhccccccccHHH
Confidence            12345677899999999999999995     6655

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.9e-44  Score=298.58  Aligned_cols=211  Identities=20%  Similarity=0.331  Sum_probs=168.7

Q ss_pred             ccccccceecccCceEEEEEEe-cCCc----eEEEEEeecC-CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QDGM----EVVVKGFNLQ-YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKAL  105 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~~~----~v~vK~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l  105 (263)
                      .+|+..+.||+|+||.||+|.+ .+|+    +||+|.+... .....+.+.+|+.++++++||||+++++++.++ ..++
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~   87 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   87 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEE
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeE
Confidence            4599999999999999999984 3343    6889988654 344567899999999999999999999999875 4678


Q ss_pred             EEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc--------------------
Q 039276          106 ILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ--------------------  165 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~--------------------  165 (263)
                      ++|++.+++|.+++......+++..+..++.|++.||+|||+++++||||||+||+++..                    
T Consensus        88 v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~  167 (317)
T d1xkka_          88 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE  167 (317)
T ss_dssp             EEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTCC-
T ss_pred             EEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCCCCCeEeeccccceeccccccc
Confidence            889999999999988877779999999999999999999999999999999999994332                    


Q ss_pred             -----ccccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhccccc
Q 039276          166 -----TLATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSR  227 (263)
Q Consensus       166 -----~~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (263)
                           ..||+.|+||            |||||||++|||+| |..||......  .+            ...+..     
T Consensus       168 ~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~--~~------------~~~i~~-----  228 (317)
T d1xkka_         168 YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EI------------SSILEK-----  228 (317)
T ss_dssp             -------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGG--GH------------HHHHHH-----
T ss_pred             ccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHH--HH------------HHHHHc-----
Confidence                 2478999999            99999999999998 88887643111  11            111111     


Q ss_pred             ccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          228 EDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       228 ~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                       +.+.+.+..+++++.+++.+||+.||++|||+.||
T Consensus       229 -~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei  263 (317)
T d1xkka_         229 -GERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL  263 (317)
T ss_dssp             -TCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             -CCCCCCCcccCHHHHHHHHHhCCCChhhCcCHHHH
Confidence             12223456677889999999999999999999864

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-44  Score=294.74  Aligned_cols=212  Identities=22%  Similarity=0.314  Sum_probs=162.9

Q ss_pred             ccccccceecccCceEEEEEEec-C---CceEEEEEeecC---CCchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ-D---GMEVVVKGFNLQ---YGGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKA  104 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~-~---~~~v~vK~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~  104 (263)
                      .+|+..+.||+|+||.||+|+.. +   ...||||++...   .....+.+.+|+.++++++||||+++++++.+. ..+
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~~-~~~   86 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP-PMK   86 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS-SCE
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeec-chh
Confidence            45999999999999999999843 2   246899998754   234466789999999999999999999999765 578


Q ss_pred             EEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-------------------
Q 039276          105 LILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-------------------  165 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-------------------  165 (263)
                      +||||++++++.+++......+++..+..++.|++.||+|||+++++||||||+||+++..                   
T Consensus        87 lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~~~  166 (273)
T d1u46a_          87 MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD  166 (273)
T ss_dssp             EEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CC
T ss_pred             eeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhccccccceeeccchhhhhcccCCC
Confidence            9999999999999887766669999999999999999999999999999999999984332                   


Q ss_pred             -------ccccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHhhhcCCCchhhhhhhccc
Q 039276          166 -------TLATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLL  225 (263)
Q Consensus       166 -------~~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (263)
                             ..|+..|+||            |||||||++|||+| |+.||...... ..+....                 
T Consensus       167 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~-~~~~~i~-----------------  228 (273)
T d1u46a_         167 HYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS-QILHKID-----------------  228 (273)
T ss_dssp             EEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-HHHHHHH-----------------
T ss_pred             cceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHH-HHHHHHH-----------------
Confidence                   2467789999            99999999999998 89998632111 1111110                 


Q ss_pred             ccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          226 SREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       226 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                       ....+.+.+..+++++.+++.+||+.||++|||++||
T Consensus       229 -~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei  265 (273)
T d1u46a_         229 -KEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL  265 (273)
T ss_dssp             -TSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             -hCCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHH
Confidence             1112223455677889999999999999999999874

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-44  Score=297.03  Aligned_cols=226  Identities=18%  Similarity=0.171  Sum_probs=164.2

Q ss_pred             ccceecccCceEEEEEE-ecCCceEEEEEeecCCC-----chHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEec
Q 039276           36 ESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYG-----GAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        36 ~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~-----~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      ..++||+|+||+||+|. ..+++.||||+++....     ...+.+.+|+++++.++||||+++++++.+.+..|+||||
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~   81 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF   81 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred             cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhh
Confidence            46789999999999999 45699999999965422     1235678999999999999999999999999999999999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-----------------------cc
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-----------------------QT  166 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-----------------------~~  166 (263)
                      +.++++..+... ...+++..+..++.||+.||+|||+++++||||||+||+.+.                       ..
T Consensus        82 ~~~~~~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~~~~~  160 (299)
T d1ua2a_          82 METDLEVIIKDN-SLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQ  160 (299)
T ss_dssp             CSEEHHHHHTTC-CSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCCCS
T ss_pred             hcchHHhhhhhc-ccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEecCCCccccccCccccccCCCcccccce
Confidence            998777665543 444888899999999999999999999999999999999433                       23


Q ss_pred             cccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchh---hhhhhc---cccc
Q 039276          167 LATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVM---KVVSAN---LLSR  227 (263)
Q Consensus       167 ~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~---~~~~  227 (263)
                      .||+.|+||             |||||||++|||++|+.||...... ..+.............   ......   ....
T Consensus       161 ~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~-~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (299)
T d1ua2a_         161 VVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL-DQLTRIFETLGTPTEEQWPDMCSLPDYVTFKS  239 (299)
T ss_dssp             CCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCC
T ss_pred             ecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHH-HHHHHHHHhcCCCChhhccchhccchhhhhcc
Confidence            579999999             9999999999999999998642111 1111111111110000   000000   0000


Q ss_pred             cccc--ccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          228 EDEH--FMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       228 ~~~~--~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .+..  ......+++++.+|+.+||+.||++|||++|+
T Consensus       240 ~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~  277 (299)
T d1ua2a_         240 FPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQA  277 (299)
T ss_dssp             CCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHH
T ss_pred             CCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHH
Confidence            0000  00112456789999999999999999999874

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.6e-44  Score=295.72  Aligned_cols=214  Identities=20%  Similarity=0.295  Sum_probs=170.9

Q ss_pred             ccccccceecccCceEEEEEEe------cCCceEEEEEeecCC-CchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCee
Q 039276           32 FLFSESNLISRGGFGSIYKAKI------QDGMEVVVKGFNLQY-GGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFK  103 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~------~~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~  103 (263)
                      ++|+..+.||+|+||.||+|++      .+++.||||+++... ......+.+|+.+++.+ +||||+++++++.+....
T Consensus        23 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~~  102 (311)
T d1t46a_          23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPT  102 (311)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCEE
Confidence            4589999999999999999984      246789999997653 33456788999999999 799999999999999999


Q ss_pred             EEEEeccCCCCHhhhhhhCC-----------------CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc--
Q 039276          104 ALILECMPHGSLGKCLSTSN-----------------YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI--  164 (263)
Q Consensus       104 ~lv~e~~~~~~L~~~l~~~~-----------------~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~--  164 (263)
                      +++||||++|+|.+++....                 ..+++..+..++.||+.||+|||+++++||||||+||+.+.  
T Consensus       103 ~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~~~~~  182 (311)
T d1t46a_         103 LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGR  182 (311)
T ss_dssp             EEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTT
T ss_pred             EEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeecccccccccccccC
Confidence            99999999999999987532                 13788899999999999999999999999999999999432  


Q ss_pred             -----------------------cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhh
Q 039276          165 -----------------------QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVN  209 (263)
Q Consensus       165 -----------------------~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~  209 (263)
                                             ...||+.|+||            |||||||++|||+|+..|+.........+.....
T Consensus       183 ~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~~i~  262 (311)
T d1t46a_         183 ITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK  262 (311)
T ss_dssp             EEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHH
T ss_pred             cccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Confidence                                   23568899999            9999999999999955554333233222222221


Q ss_pred             hcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          210 DLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                                  ...      +...+..+++++.+|+.+||+.||.+|||++||
T Consensus       263 ------------~~~------~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~i  298 (311)
T d1t46a_         263 ------------EGF------RMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQI  298 (311)
T ss_dssp             ------------HTC------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             ------------cCC------CCCCcccccHHHHHHHHHHcCCChhHCcCHHHH
Confidence                        111      112334566779999999999999999999874

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-44  Score=295.07  Aligned_cols=204  Identities=20%  Similarity=0.268  Sum_probs=168.1

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCCC------chHHHHHHHHHHHhhcC--CCcceeEeeEeecCCe
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYG------GAFKNLDVECNMMKIIR--HQNLIKIISSCSKDDF  102 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~------~~~~~~~~e~~~l~~~~--h~~i~~~~~~~~~~~~  102 (263)
                      ++|+..+.||+|+||.||+|+ ..+++.||||++.....      ....++.+|+.++++++  ||||+++++++.+.+.
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~   83 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS   83 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred             CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe
Confidence            459999999999999999999 45799999999975421      12334567999999986  8999999999999999


Q ss_pred             eEEEEeccCC-CCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-----------------
Q 039276          103 KALILECMPH-GSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-----------------  164 (263)
Q Consensus       103 ~~lv~e~~~~-~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-----------------  164 (263)
                      .++|||++.+ +++.+++..... +++..++.++.|++.||+|||+++++||||||+||+.+.                 
T Consensus        84 ~~lv~e~~~~~~~l~~~~~~~~~-l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~~  162 (273)
T d1xwsa_          84 FVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK  162 (273)
T ss_dssp             EEEEEECCSSEEEHHHHHHHHCS-CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred             EEEEEEeccCcchHHHHHhccCC-CCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEecCCCeEEECccccceecc
Confidence            9999999975 578888876544 899999999999999999999999999999999999542                 


Q ss_pred             -----cccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccc
Q 039276          165 -----QTLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLS  226 (263)
Q Consensus       165 -----~~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (263)
                           ...||+.|+||             |||||||++|||++|+.||....                   .+....   
T Consensus       163 ~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~-------------------~i~~~~---  220 (273)
T d1xwsa_         163 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------------------EIIRGQ---  220 (273)
T ss_dssp             SSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------------------HHHHCC---
T ss_pred             cccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCch-------------------HHhhcc---
Confidence                 23689999999             99999999999999999986320                   011000   


Q ss_pred             cccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          227 REDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       227 ~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                           ...+..+++++.+++.+||+.||++|||++|+
T Consensus       221 -----~~~~~~~s~~~~~li~~~L~~dp~~R~s~~ei  252 (273)
T d1xwsa_         221 -----VFFRQRVSSECQHLIRWCLALRPSDRPTFEEI  252 (273)
T ss_dssp             -----CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             -----cCCCCCCCHHHHHHHHHHccCCHhHCcCHHHH
Confidence                 01233456789999999999999999999864

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.8e-43  Score=292.59  Aligned_cols=212  Identities=22%  Similarity=0.326  Sum_probs=170.4

Q ss_pred             ccccccceecccCceEEEEEEec------CCceEEEEEeecCCCc-hHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ------DGMEVVVKGFNLQYGG-AFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKA  104 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~------~~~~v~vK~~~~~~~~-~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~  104 (263)
                      +.|+..+.||+|+||.||+|++.      +++.||||+++..... ..+.+.+|+++++.++|+|++++++++.+.+..+
T Consensus        13 ~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~   92 (301)
T d1lufa_          13 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMC   92 (301)
T ss_dssp             GGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCE
T ss_pred             HHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccCCceE
Confidence            34999999999999999999853      3578999999765433 4567899999999999999999999999999999


Q ss_pred             EEEeccCCCCHhhhhhhCC-----------------------CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccc
Q 039276          105 LILECMPHGSLGKCLSTSN-----------------------YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSL  161 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~-----------------------~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil  161 (263)
                      +++|++++|+|.+++....                       ..+++..+..++.|++.||+|||+++++||||||+||+
T Consensus        93 ~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDlKp~NIL  172 (301)
T d1lufa_          93 LLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCL  172 (301)
T ss_dssp             EEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred             EEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeEEcccceE
Confidence            9999999999999986432                       12678889999999999999999999999999999999


Q ss_pred             cccc-------------------------ccccccccCc------------chhhHHHHHHHHHhCC-CCCccccCCCch
Q 039276          162 TQIQ-------------------------TLATISYMAP------------DTYNFGIMIMETFSGK-KPTIKFFHGEMT  203 (263)
Q Consensus       162 ~~~~-------------------------~~g~~~y~aP------------Dv~SlG~il~ell~g~-~Pf~~~~~~~~~  203 (263)
                      ++.+                         ..|++.|+||            |||||||++|||++|. .||...... ..
T Consensus       173 ld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~-e~  251 (301)
T d1lufa_         173 VGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHE-EV  251 (301)
T ss_dssp             ECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-HH
T ss_pred             ECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCCHH-HH
Confidence            5432                         2467889999            9999999999999986 566432111 10


Q ss_pred             hhhHhhhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          204 LKHWVNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ...             +.      ...+.+.+..+++++.+++.+||+.+|++||||.||
T Consensus       252 ~~~-------------v~------~~~~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev  292 (301)
T d1lufa_         252 IYY-------------VR------DGNILACPENCPLELYNLMRLCWSKLPADRPSFCSI  292 (301)
T ss_dssp             HHH-------------HH------TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             HHH-------------HH------cCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHH
Confidence            110             00      111223355677789999999999999999999874

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-43  Score=291.23  Aligned_cols=212  Identities=24%  Similarity=0.380  Sum_probs=166.1

Q ss_pred             ccccccceecccCceEEEEEEec-CCc--eEEEEEeecC-CCchHHHHHHHHHHHhhc-CCCcceeEeeEeecCCeeEEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ-DGM--EVVVKGFNLQ-YGGAFKNLDVECNMMKII-RHQNLIKIISSCSKDDFKALI  106 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~-~~~--~v~vK~~~~~-~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv  106 (263)
                      +.|+..+.||+|+||.||+|.+. ++.  .||||.+... .....+.+.+|+++++.+ +||||+++++++.+.+..++|
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV   89 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   89 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEE
Confidence            35888999999999999999954 444  4678887544 334566789999999998 799999999999999999999


Q ss_pred             EeccCCCCHhhhhhhC---------------CCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-------
Q 039276          107 LECMPHGSLGKCLSTS---------------NYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-------  164 (263)
Q Consensus       107 ~e~~~~~~L~~~l~~~---------------~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-------  164 (263)
                      |||+++|+|.+++...               ...+++..+..++.|++.||.|||+++++||||||+||+.+.       
T Consensus        90 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~~~~~kl~  169 (309)
T d1fvra_          90 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIA  169 (309)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEEC
T ss_pred             EEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEEcCCCceEEc
Confidence            9999999999998643               234899999999999999999999999999999999999433       


Q ss_pred             ---------------cccccccccCc------------chhhHHHHHHHHHhCCC-CCccccCCCchhhhHhhhcCCCch
Q 039276          165 ---------------QTLATISYMAP------------DTYNFGIMIMETFSGKK-PTIKFFHGEMTLKHWVNDLLPNSV  216 (263)
Q Consensus       165 ---------------~~~g~~~y~aP------------Dv~SlG~il~ell~g~~-Pf~~~~~~~~~~~~~~~~~~~~~~  216 (263)
                                     ...||..|+||            |||||||++|||++|.. ||... . ...+.           
T Consensus       170 DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~-~-~~~~~-----------  236 (309)
T d1fvra_         170 DFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM-T-CAELY-----------  236 (309)
T ss_dssp             CTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC-C-HHHHH-----------
T ss_pred             cccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCC-C-HHHHH-----------
Confidence                           22578899999            99999999999999665 55421 1 01110           


Q ss_pred             hhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          217 MKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                       ..+.      ...+++.+..+++++.+|+.+||+.||++|||++||
T Consensus       237 -~~i~------~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ei  276 (309)
T d1fvra_         237 -EKLP------QGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQI  276 (309)
T ss_dssp             -HHGG------GTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             -HHHH------hcCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence             0010      112233456678889999999999999999999874

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-43  Score=291.86  Aligned_cols=212  Identities=24%  Similarity=0.376  Sum_probs=165.1

Q ss_pred             ccccccceecccCceEEEEEEecC--------CceEEEEEeecCCC-chHHHHHHHHHHHhhc-CCCcceeEeeEeecCC
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQD--------GMEVVVKGFNLQYG-GAFKNLDVECNMMKII-RHQNLIKIISSCSKDD  101 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~--------~~~v~vK~~~~~~~-~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~  101 (263)
                      ++|+..+.||+|+||.||+|+...        +..||||+++.... .....+.+|...+.++ +||||+++++++.+.+
T Consensus        13 ~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~   92 (299)
T d1fgka_          13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG   92 (299)
T ss_dssp             GGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             HHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccCC
Confidence            459999999999999999998421        24799999976643 3456778888888888 8999999999999999


Q ss_pred             eeEEEEeccCCCCHhhhhhhCC---------------CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-
Q 039276          102 FKALILECMPHGSLGKCLSTSN---------------YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-  165 (263)
Q Consensus       102 ~~~lv~e~~~~~~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-  165 (263)
                      ..++||||+++|+|.+++....               ..+++..++.++.|++.||+|||+++++||||||+||+.+.. 
T Consensus        93 ~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl~~~~  172 (299)
T d1fgka_          93 PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN  172 (299)
T ss_dssp             SCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTC
T ss_pred             eEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccceeecCCC
Confidence            9999999999999999997542               237899999999999999999999999999999999994321 


Q ss_pred             ------------------------ccccccccCc------------chhhHHHHHHHHHh-CCCCCccccCCCchhhhHh
Q 039276          166 ------------------------TLATISYMAP------------DTYNFGIMIMETFS-GKKPTIKFFHGEMTLKHWV  208 (263)
Q Consensus       166 ------------------------~~g~~~y~aP------------Dv~SlG~il~ell~-g~~Pf~~~~~~~~~~~~~~  208 (263)
                                              ..|++.|+||            |||||||++|||++ |..||......  .+    
T Consensus       173 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~--~~----  246 (299)
T d1fgka_         173 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE--EL----  246 (299)
T ss_dssp             CEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HH----
T ss_pred             CeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHH--HH----
Confidence                                    3578899999            99999999999998 78887532111  11    


Q ss_pred             hhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          209 NDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                              ...+..      +.+.+.+..+++++.+++.+||+.||++|||+.||
T Consensus       247 --------~~~i~~------~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~ei  287 (299)
T d1fgka_         247 --------FKLLKE------GHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQL  287 (299)
T ss_dssp             --------HHHHHT------TCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             --------HHHHHc------CCCCCCCccchHHHHHHHHHHccCCHhHCcCHHHH
Confidence                    111111      11223345667789999999999999999999874

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.8e-43  Score=290.14  Aligned_cols=231  Identities=17%  Similarity=0.196  Sum_probs=167.6

Q ss_pred             ccccccceecccCceEEEEEEe-cC-CceEEEEEeecCC--CchHHHHHHHHHHHhhc---CCCcceeEeeEeec-----
Q 039276           32 FLFSESNLISRGGFGSIYKAKI-QD-GMEVVVKGFNLQY--GGAFKNLDVECNMMKII---RHQNLIKIISSCSK-----   99 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~-~~-~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~---~h~~i~~~~~~~~~-----   99 (263)
                      ++|+..+.||+|+||.||+|.. .+ ++.||||++....  ........+|+.+++.+   +||||+++++++..     
T Consensus         7 ~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~   86 (305)
T d1blxa_           7 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR   86 (305)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSS
T ss_pred             CCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeeccccccc
Confidence            5699999999999999999985 44 5678999996542  22344566788777665   79999999999853     


Q ss_pred             CCeeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc---------------
Q 039276          100 DDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI---------------  164 (263)
Q Consensus       100 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~---------------  164 (263)
                      ....++++|++.++++..........+++..++.++.|++.||+|||+++|+||||||+|||.+.               
T Consensus        87 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~~~~~kl~dfg~~~~~  166 (305)
T d1blxa_          87 ETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY  166 (305)
T ss_dssp             EEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCCC
T ss_pred             CceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEcCCCCeeecchhhhhhh
Confidence            34689999999987776655555555899999999999999999999999999999999999533               


Q ss_pred             -------cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhh-----
Q 039276          165 -------QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVV-----  220 (263)
Q Consensus       165 -------~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~-----  220 (263)
                             ...||+.|+||            ||||+||++|||++|+.||.... ....+................     
T Consensus       167 ~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~  245 (305)
T d1blxa_         167 SFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS-DVDQLGKILDVIGLPGEEDWPRDVAL  245 (305)
T ss_dssp             CGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS-HHHHHHHHHHHHCCCCGGGSCTTCSS
T ss_pred             cccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCC-HHHHHHHHHHhhCCCchhcccccccc
Confidence                   23689999999            99999999999999999996431 112222222111111000000     


Q ss_pred             -hhcc-cccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          221 -SANL-LSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       221 -~~~~-~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                       .... .............+++++.+|+.+||+.||++|||++|+
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~  290 (305)
T d1blxa_         246 PRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA  290 (305)
T ss_dssp             CGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred             hhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHH
Confidence             0000 000001111234567789999999999999999998764

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-42  Score=287.49  Aligned_cols=226  Identities=22%  Similarity=0.269  Sum_probs=164.9

Q ss_pred             ccccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHH--HHHHHHhhcCCCcceeEeeEeecCC----eeEE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLD--VECNMMKIIRHQNLIKIISSCSKDD----FKAL  105 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~--~e~~~l~~~~h~~i~~~~~~~~~~~----~~~l  105 (263)
                      .+|...+.||+|+||.||+|+.. |+.||||+++...   .....  .|+..+..++||||+++++++.+.+    ..++
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~~-g~~vAvK~~~~~~---~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~l   78 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL   78 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEET-TEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEEC-CEEEEEEEECccc---hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEE
Confidence            45888899999999999999875 8999999997552   23333  3555566789999999999997543    5799


Q ss_pred             EEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhcc--------CCccccccCCCcccccc-------------
Q 039276          106 ILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHF--------GHSTHLLLKEDQSLTQI-------------  164 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~--------~~i~h~dlk~~nil~~~-------------  164 (263)
                      ||||+++|+|.+++++..  +++..+..++.|++.||+|+|.        ++|+||||||+||+++.             
T Consensus        79 v~Ey~~~g~L~~~l~~~~--l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~  156 (303)
T d1vjya_          79 VSDYHEHGSLFDYLNRYT--VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV  156 (303)
T ss_dssp             EEECCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             EEecccCCCHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCccc
Confidence            999999999999998653  7899999999999999999996        69999999999999432             


Q ss_pred             --------------cccccccccCc------------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcC
Q 039276          165 --------------QTLATISYMAP------------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLL  212 (263)
Q Consensus       165 --------------~~~g~~~y~aP------------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~  212 (263)
                                    ...||+.|+||                  |||||||++|||+||..||..................
T Consensus       157 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~  236 (303)
T d1vjya_         157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP  236 (303)
T ss_dssp             EEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred             cccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccc
Confidence                          23579999999                  9999999999999999887543222221111110000


Q ss_pred             C-CchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          213 P-NSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       213 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      . ........................++.++.+++.+||+.||++|||+.||
T Consensus       237 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei  288 (303)
T d1vjya_         237 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRI  288 (303)
T ss_dssp             CHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHH
T ss_pred             hHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHH
Confidence            0 00011111000101111112244567789999999999999999999874

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-42  Score=288.86  Aligned_cols=211  Identities=18%  Similarity=0.319  Sum_probs=167.0

Q ss_pred             ccccceecccCceEEEEEEecC----CceEEEEEeecC-CCchHHHHHHHHHHHhhcCCCcceeEeeEeec-CCeeEEEE
Q 039276           34 FSESNLISRGGFGSIYKAKIQD----GMEVVVKGFNLQ-YGGAFKNLDVECNMMKIIRHQNLIKIISSCSK-DDFKALIL  107 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~~~----~~~v~vK~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~lv~  107 (263)
                      ++..++||+|+||+||+|++.+    ...||||.++.. .....+++.+|++++++++||||+++++++.+ .+..++||
T Consensus        29 ~~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~  108 (311)
T d1r0pa_          29 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL  108 (311)
T ss_dssp             EEEEEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEE
T ss_pred             eccceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEE
Confidence            3346789999999999998543    235899999754 34456789999999999999999999999865 46789999


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc----------------------
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ----------------------  165 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~----------------------  165 (263)
                      |||++++|.+++.......++..+..++.|++.||.|||+.+++||||||+||+++..                      
T Consensus       109 E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~  188 (311)
T d1r0pa_         109 PYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV  188 (311)
T ss_dssp             ECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCT
T ss_pred             EEeecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeECCCCCEEEecccchhhccccccccc
Confidence            9999999999998776668888899999999999999999999999999999995432                      


Q ss_pred             -----ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhcccccc
Q 039276          166 -----TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSANLLSRE  228 (263)
Q Consensus       166 -----~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (263)
                           ..||+.|+||            ||||||+++|||++|..||...............                   
T Consensus       189 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~-------------------  249 (311)
T d1r0pa_         189 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ-------------------  249 (311)
T ss_dssp             TCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHT-------------------
T ss_pred             eecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHc-------------------
Confidence                 2467889999            9999999999999988886543221111111111                   


Q ss_pred             cccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          229 DEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       229 ~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      +.+...+..+++++.+++.+||+.||++|||+.||
T Consensus       250 g~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei  284 (311)
T d1r0pa_         250 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL  284 (311)
T ss_dssp             TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             CCCCCCcccCcHHHHHHHHHHcCCCHhHCcCHHHH
Confidence            11222345667789999999999999999999874

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-42  Score=283.78  Aligned_cols=231  Identities=19%  Similarity=0.177  Sum_probs=174.8

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeEEEEe
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKALILE  108 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e  108 (263)
                      ++|+..+.||+|+||+||+|+ ..+++.||||+++...  .....++.+|+.+++.++|+||+++++++.+....++++|
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~   81 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence            469999999999999999999 4568999999997653  3456788899999999999999999999999999999999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------------
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------------  165 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------------  165 (263)
                      ++.++++..++...+ .+++..+..++.|++.||+|||.++|+||||||+||+....                       
T Consensus        82 ~~~~~~l~~~~~~~~-~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~~~~  160 (292)
T d1unla_          82 FCDQDLKKYFDSCNG-DLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSA  160 (292)
T ss_dssp             CCSEEHHHHHHHTTT-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSCCCS
T ss_pred             ecccccccccccccc-ccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccccCCceeeeecchhhcccCCCcccee
Confidence            999988888776544 48899999999999999999999999999999999995432                       


Q ss_pred             ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCch------hhhhhhcc--
Q 039276          166 TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSV------MKVVSANL--  224 (263)
Q Consensus       166 ~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~--  224 (263)
                      ..++..|+||             |||||||++|||++|+.||.........+............      ........  
T Consensus       161 ~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (292)
T d1unla_         161 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYP  240 (292)
T ss_dssp             CCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCC
T ss_pred             eccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccccccc
Confidence            1345667776             99999999999999999975433222222222211111100      00000000  


Q ss_pred             -cccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          225 -LSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       225 -~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                       ..............++++.+|+.+||+.||.+|||++||
T Consensus       241 ~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~  280 (292)
T d1unla_         241 MYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEA  280 (292)
T ss_dssp             CCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             cccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHH
Confidence             000111112234567789999999999999999999874

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.1e-42  Score=283.63  Aligned_cols=213  Identities=20%  Similarity=0.303  Sum_probs=163.3

Q ss_pred             ccccccceecccCceEEEEEEec------CCceEEEEEeecCC-CchHHHHHHHHHHHhhc-CCCcceeEeeEeec-CCe
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ------DGMEVVVKGFNLQY-GGAFKNLDVECNMMKII-RHQNLIKIISSCSK-DDF  102 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~------~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~-~~~  102 (263)
                      ++|+..+.||+|+||.||+|.+.      +++.||||+++... ....+.+.+|...+.++ +|+||+.+++++.+ ...
T Consensus        13 ~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~   92 (299)
T d1ywna1          13 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP   92 (299)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSC
T ss_pred             HHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCCe
Confidence            45999999999999999999843      24679999987553 23455677788877777 68999999998765 456


Q ss_pred             eEEEEeccCCCCHhhhhhhCC---------------CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc---
Q 039276          103 KALILECMPHGSLGKCLSTSN---------------YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI---  164 (263)
Q Consensus       103 ~~lv~e~~~~~~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~---  164 (263)
                      .+++||||++|+|.+++....               ..+++..+..++.|++.||+|||+++|+||||||+||+++.   
T Consensus        93 ~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl~~~~~  172 (299)
T d1ywna1          93 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV  172 (299)
T ss_dssp             CEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGC
T ss_pred             EEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeECCCCc
Confidence            899999999999999997532               23788899999999999999999999999999999999432   


Q ss_pred             ----------------------cccccccccCc------------chhhHHHHHHHHHhC-CCCCccccCCCchhhhHhh
Q 039276          165 ----------------------QTLATISYMAP------------DTYNFGIMIMETFSG-KKPTIKFFHGEMTLKHWVN  209 (263)
Q Consensus       165 ----------------------~~~g~~~y~aP------------Dv~SlG~il~ell~g-~~Pf~~~~~~~~~~~~~~~  209 (263)
                                            ...||+.|+||            |||||||++|||++| ..||...... ..+...  
T Consensus       173 ~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~-~~~~~~--  249 (299)
T d1ywna1         173 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRR--  249 (299)
T ss_dssp             EEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCS-HHHHHH--
T ss_pred             EEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHH-HHHHHH--
Confidence                                  23578999999            999999999999996 4566532211 111111  


Q ss_pred             hcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          210 DLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                                +..      +.+.+.+..+++++.+++.+||+.||++|||++||
T Consensus       250 ----------~~~------~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ei  287 (299)
T d1ywna1         250 ----------LKE------GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL  287 (299)
T ss_dssp             ----------HHH------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             ----------Hhc------CCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence                      111      11122345667789999999999999999999874

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-42  Score=291.17  Aligned_cols=229  Identities=20%  Similarity=0.224  Sum_probs=164.6

Q ss_pred             cccccccceecccCceEEEEEE-ecCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecCC------
Q 039276           31 LFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDD------  101 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~------  101 (263)
                      ..+|+..++||+|+||+||+|. ..+++.||||++....  ....+.+.+|+++++.++||||+++++++...+      
T Consensus        17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~   96 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT   96 (346)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             CCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccc
Confidence            3569999999999999999999 4569999999997542  234667889999999999999999999997654      


Q ss_pred             eeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-----------------
Q 039276          102 FKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-----------------  164 (263)
Q Consensus       102 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-----------------  164 (263)
                      ..|++|||+ +.+|..+.+..  .+++..++.++.|++.||+|||+++|+||||||+||+.+.                 
T Consensus        97 ~~~lv~e~~-~~~l~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~  173 (346)
T d1cm8a_          97 DFYLVMPFM-GTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADS  173 (346)
T ss_dssp             CCEEEEECC-SEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             eEEEEEecc-cccHHHHHHhc--cccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhcccccccccccccceeccCC
Confidence            569999999 55888877653  3899999999999999999999999999999999999543                 


Q ss_pred             ---cccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCc--h--------hh
Q 039276          165 ---QTLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNS--V--------MK  218 (263)
Q Consensus       165 ---~~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~--~--------~~  218 (263)
                         ...||+.|+||             ||||+||++|||++|+.||...... ..+...........  .        ..
T Consensus       174 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (346)
T d1cm8a_         174 EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHL-DQLKEIMKVTGTPPAEFVQRLQSDEAK  252 (346)
T ss_dssp             SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHHHTCSCHHHH
T ss_pred             ccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChH-HHHHHHHhccCCCcHHHHhhhcchhhh
Confidence               24689999999             9999999999999999999643111 11111111111100  0        00


Q ss_pred             hhhhccccc-ccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          219 VVSANLLSR-EDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       219 ~~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ......... ..........+++++.+|+.+||+.||++|||++|+
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~ei  298 (346)
T d1cm8a_         253 NYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEA  298 (346)
T ss_dssp             HHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred             hhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHH
Confidence            000000000 000011124556789999999999999999999874

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.8e-42  Score=289.72  Aligned_cols=232  Identities=17%  Similarity=0.130  Sum_probs=166.2

Q ss_pred             cccccccccceecccCceEEEEEE-ecCCceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecCC----e
Q 039276           29 SGLFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDD----F  102 (263)
Q Consensus        29 ~~~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~----~  102 (263)
                      ....+|+..+.||+|+||+||+|. ..+++.||||++.... ....+.+.+|++++++++|||++++++++....    .
T Consensus         5 ~i~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~   84 (345)
T d1pmea_           5 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMK   84 (345)
T ss_dssp             CCCTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCC
T ss_pred             CcCCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccc
Confidence            334569999999999999999998 5679999999997653 334667889999999999999999999986543    2


Q ss_pred             eEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc------------------
Q 039276          103 KALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI------------------  164 (263)
Q Consensus       103 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~------------------  164 (263)
                      .+++++++.+++|.+++...  .+++..+..++.|++.||+|||+++|+||||||+||+++.                  
T Consensus        85 ~~~l~~~~~~g~L~~~l~~~--~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~  162 (345)
T d1pmea_          85 DVYLVTHLMGADLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD  162 (345)
T ss_dssp             CEEEEEECCCEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGG
T ss_pred             eEEEEEeecCCchhhhhhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECCCCCEEEcccCceeeccCC
Confidence            24445567789999999764  3899999999999999999999999999999999999433                  


Q ss_pred             --------cccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchh------
Q 039276          165 --------QTLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVM------  217 (263)
Q Consensus       165 --------~~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~------  217 (263)
                              ...||+.|+||             ||||+||++|||++|+.||......+... ............      
T Consensus       163 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  241 (345)
T d1pmea_         163 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN-HILGILGSPSQEDLNCII  241 (345)
T ss_dssp             GCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH-HHHHHHCSCCHHHHHTCC
T ss_pred             CccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHH-HHhhhccCCChhhhhhhh
Confidence                    22478899999             99999999999999999996432211111 111111110000      


Q ss_pred             -----hhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          218 -----KVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       218 -----~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                           ....................+++++.+|+.+||+.||++|||++|+
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~  292 (345)
T d1pmea_         242 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA  292 (345)
T ss_dssp             CHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred             hhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHH
Confidence                 0000000000000000123456679999999999999999999864

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-41  Score=288.20  Aligned_cols=228  Identities=18%  Similarity=0.120  Sum_probs=165.1

Q ss_pred             cccccccceecccCceEEEEEEe-cCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeec------CC
Q 039276           31 LFLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSK------DD  101 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~------~~  101 (263)
                      ..+|+..++||+|+||+||+|.. .+|+.||||++....  ....+++.+|+.+++.++||||+++++++..      ..
T Consensus        16 ~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~   95 (355)
T d2b1pa1          16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ   95 (355)
T ss_dssp             ETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             cCCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCc
Confidence            35699999999999999999994 469999999998653  3345678899999999999999999999853      35


Q ss_pred             eeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc----------------
Q 039276          102 FKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ----------------  165 (263)
Q Consensus       102 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~----------------  165 (263)
                      ..|++|||+.++ +.+.+..   .+++..++.++.|++.||+|||++|++||||||+||+...+                
T Consensus        96 ~~~iv~Ey~~~~-l~~~~~~---~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~  171 (355)
T d2b1pa1          96 DVYLVMELMDAN-LCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT  171 (355)
T ss_dssp             EEEEEEECCSEE-HHHHHTS---CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC------
T ss_pred             eeEEEEeccchH-HHHhhhc---CCCHHHHHHHHHHHHHHHHHhhhcccccccCCccccccccccceeeechhhhhcccc
Confidence            789999999764 4444432   38999999999999999999999999999999999995432                


Q ss_pred             ------ccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhH--------------------
Q 039276          166 ------TLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHW--------------------  207 (263)
Q Consensus       166 ------~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~--------------------  207 (263)
                            ..+|+.|+||            ||||+||+++||++|+.||...... ......                    
T Consensus       172 ~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~  250 (355)
T d2b1pa1         172 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI-DQWNKVIEQLGTPCPEFMKKLQPTVR  250 (355)
T ss_dssp             ---------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHHTTSCHHHH
T ss_pred             ccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHH-HHHHHHHHhccCCCHHHHHHhhhhHH
Confidence                  2578999999            9999999999999999999532110 001111                    


Q ss_pred             --hhhcCCCchhhhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          208 --VNDLLPNSVMKVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       208 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                        ...............................++++.+|+.+||..||++|||++||
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~el  308 (355)
T d2b1pa1         251 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA  308 (355)
T ss_dssp             HHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred             HHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHH
Confidence              11000000000000000001111112345678889999999999999999999874

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.4e-42  Score=285.41  Aligned_cols=231  Identities=17%  Similarity=0.249  Sum_probs=165.9

Q ss_pred             cccccccceecccCceEEEEEEe-cCCceEEEEEeecC--CCchHHHHHHHHHHHhhcCCCcceeEeeEeec--------
Q 039276           31 LFLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQ--YGGAFKNLDVECNMMKIIRHQNLIKIISSCSK--------   99 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--------   99 (263)
                      .++|+..+.||+|+||+||+|.. .+++.||||++...  ......++.+|+.+++.++|+|++++++.+..        
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~   88 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   88 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccccc
Confidence            46799999999999999999994 57999999998655  33456678899999999999999999998854        


Q ss_pred             CCeeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc--------------
Q 039276          100 DDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ--------------  165 (263)
Q Consensus       100 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~--------------  165 (263)
                      ....+++||++.++.+..... ....+++..++.++.|++.||.|||+++|+||||||+||+.+.+              
T Consensus        89 ~~~~~iv~e~~~~~~~~~~~~-~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~~~kl~dfg~~~~~  167 (318)
T d3blha1          89 KGSIYLVFDFCEHDLAGLLSN-VLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAF  167 (318)
T ss_dssp             --CEEEEEECCCEEHHHHHTC-TTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred             CceEEEEEeccCCCccchhhh-cccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeecCCCcEEeeecceeeec
Confidence            245799999998866554443 34448999999999999999999999999999999999995432              


Q ss_pred             -------------ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhh---HhhhcCCCch
Q 039276          166 -------------TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKH---WVNDLLPNSV  216 (263)
Q Consensus       166 -------------~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~---~~~~~~~~~~  216 (263)
                                   ..||+.|+||             |||||||++|||++|+.||...... ..+..   ......+...
T Consensus       168 ~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~  246 (318)
T d3blha1         168 SLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ-HQLALISQLCGSITPEVW  246 (318)
T ss_dssp             CC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCTTTS
T ss_pred             ccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHH-HHHHHHHHhcCCCChhhc
Confidence                         2579999999             9999999999999999999643111 11111   1111111100


Q ss_pred             hhhhhh----ccccccccccc-----chHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          217 MKVVSA----NLLSREDEHFM-----TKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       217 ~~~~~~----~~~~~~~~~~~-----~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ......    ...........     .....++++.+|+.+||+.||++|||++|+
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~el  302 (318)
T d3blha1         247 PNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDA  302 (318)
T ss_dssp             TTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred             cccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHH
Confidence            000000    00000000000     112335678899999999999999999874

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=1.8e-41  Score=283.91  Aligned_cols=227  Identities=15%  Similarity=0.196  Sum_probs=170.3

Q ss_pred             ccccccccceecccCceEEEEEEe-cCCceEEEEEeecCCCchHHHHHHHHHHHhhcC-CCcceeEeeEeec--CCeeEE
Q 039276           30 GLFLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIR-HQNLIKIISSCSK--DDFKAL  105 (263)
Q Consensus        30 ~~~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~--~~~~~l  105 (263)
                      ..++|+..++||+|+||+||+|+. .+++.||||+++..   ..+++.+|+++++.+. ||||+++++++..  ....++
T Consensus        33 ~~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~---~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~  109 (328)
T d3bqca1          33 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPAL  109 (328)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEE
T ss_pred             CCcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH---HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeE
Confidence            446799999999999999999994 67999999998754   3567889999999995 9999999999864  456899


Q ss_pred             EEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc--------------------
Q 039276          106 ILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ--------------------  165 (263)
Q Consensus       106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~--------------------  165 (263)
                      ||||+.+++|..+.+    .+++..+..++.||+.||+|||+++|+||||||+|||.+..                    
T Consensus       110 v~e~~~~~~L~~~~~----~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~~  185 (328)
T d3bqca1         110 VFEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE  185 (328)
T ss_dssp             EEECCCSCBGGGTTT----SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTCC
T ss_pred             EEeecCCCcHHHHhc----CCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCCCCeeeecccccceeccCCCc
Confidence            999999999987653    38999999999999999999999999999999999995431                    


Q ss_pred             ---ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhh------------hHhhhcCCCchh
Q 039276          166 ---TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLK------------HWVNDLLPNSVM  217 (263)
Q Consensus       166 ---~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~------------~~~~~~~~~~~~  217 (263)
                         ..+|+.|+||             ||||+||+++||++|+.||...........            .+..........
T Consensus       186 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~  265 (328)
T d3bqca1         186 YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP  265 (328)
T ss_dssp             CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCG
T ss_pred             ccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCc
Confidence               2468889999             999999999999999999864322111111            111111111000


Q ss_pred             h---hhhhcccc--cccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          218 K---VVSANLLS--REDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       218 ~---~~~~~~~~--~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      .   ........  ...........+++++.+|+.+||+.||++|||++|+
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~  316 (328)
T d3bqca1         266 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA  316 (328)
T ss_dssp             GGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             ccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHH
Confidence            0   00000000  0001112335677889999999999999999999874

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-41  Score=286.12  Aligned_cols=228  Identities=17%  Similarity=0.200  Sum_probs=164.1

Q ss_pred             cccccccceecccCceEEEEEEe-cCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcceeEeeEeec------CCee
Q 039276           31 LFLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLIKIISSCSK------DDFK  103 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~------~~~~  103 (263)
                      ..+|+..++||+|+||+||+|+. .+++.||||++......    ..+|++++++++|+||+++++++..      ..+.
T Consensus        19 ~~~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~----~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~   94 (350)
T d1q5ka_          19 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF----KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL   94 (350)
T ss_dssp             EEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSS----CCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEE
T ss_pred             cCCcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccchH----HHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEE
Confidence            34699999999999999999994 56999999999765322    2369999999999999999999853      2357


Q ss_pred             EEEEeccCCCCHhhhhh--hCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc----------------
Q 039276          104 ALILECMPHGSLGKCLS--TSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ----------------  165 (263)
Q Consensus       104 ~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~----------------  165 (263)
                      ++||||++++.+..+..  .....+++..+..++.|++.||+|||+++|+||||||+||+++.+                
T Consensus        95 ~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~  174 (350)
T d1q5ka_          95 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV  174 (350)
T ss_dssp             EEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTTCCEEECCCTTCEECC
T ss_pred             EEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEecCCCceeEecccchhhcc
Confidence            89999998754333322  233448999999999999999999999999999999999995432                


Q ss_pred             -------ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhc--
Q 039276          166 -------TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSAN--  223 (263)
Q Consensus       166 -------~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  223 (263)
                             ..|+..|+||             ||||+||++|||++|+.||...... ..+..............+....  
T Consensus       175 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~-~~l~~i~~~~g~~~~~~~~~~~~~  253 (350)
T d1q5ka_         175 RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVLGTPTREQIREMNPN  253 (350)
T ss_dssp             TTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHH-HHHHHHHHHHCCCCHHHHHHHCC-
T ss_pred             CCcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHH-HHHHHHHHHhCCChHHhhhhhccc
Confidence                   2578889999             9999999999999999999643211 1121111111111100000000  


Q ss_pred             -----c--cccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          224 -----L--LSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       224 -----~--~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                           .  .............+++++.+|+.+||+.||++|||+.|+
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~  300 (350)
T d1q5ka_         254 YTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEA  300 (350)
T ss_dssp             --CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             hhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHH
Confidence                 0  000000011223467789999999999999999999864

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-41  Score=282.20  Aligned_cols=212  Identities=19%  Similarity=0.310  Sum_probs=169.0

Q ss_pred             ccccccceecccCceEEEEEEec------CCceEEEEEeecCC-CchHHHHHHHHHHHhhcCCCcceeEeeEeecCCeeE
Q 039276           32 FLFSESNLISRGGFGSIYKAKIQ------DGMEVVVKGFNLQY-GGAFKNLDVECNMMKIIRHQNLIKIISSCSKDDFKA  104 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~~~------~~~~v~vK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~  104 (263)
                      ++|+..+.||+|+||.||+|.+.      ++..||||+++... ......+.+|+.++++++||||+++++++...+..+
T Consensus        20 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~   99 (308)
T d1p4oa_          20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL   99 (308)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCE
T ss_pred             HHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCcee
Confidence            56899999999999999999853      25789999997553 234456889999999999999999999999888999


Q ss_pred             EEEeccCCCCHhhhhhhCC---------CcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-----------
Q 039276          105 LILECMPHGSLGKCLSTSN---------YILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-----------  164 (263)
Q Consensus       105 lv~e~~~~~~L~~~l~~~~---------~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-----------  164 (263)
                      +||||+++|+|.+++....         ..+++..+..++.|++.||.|||.++++||||||+||+.+.           
T Consensus       100 lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~~~~~Kl~DFGl  179 (308)
T d1p4oa_         100 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGM  179 (308)
T ss_dssp             EEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTTC
T ss_pred             EEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeecCCceEEEeeccc
Confidence            9999999999999886421         22578889999999999999999999999999999999432           


Q ss_pred             --------------cccccccccCc------------chhhHHHHHHHHHhCC-CCCccccCCCchhhhHhhhcCCCchh
Q 039276          165 --------------QTLATISYMAP------------DTYNFGIMIMETFSGK-KPTIKFFHGEMTLKHWVNDLLPNSVM  217 (263)
Q Consensus       165 --------------~~~g~~~y~aP------------Dv~SlG~il~ell~g~-~Pf~~~~~~~~~~~~~~~~~~~~~~~  217 (263)
                                    ...||+.|+||            |||||||++|||+||. .||... .....+...          
T Consensus       180 a~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~-~~~~~~~~i----------  248 (308)
T d1p4oa_         180 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL-SNEQVLRFV----------  248 (308)
T ss_dssp             CCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS-CHHHHHHHH----------
T ss_pred             ceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCC-CHHHHHHHH----------
Confidence                          22578899999            9999999999999975 665432 111111111          


Q ss_pred             hhhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          218 KVVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                        .+       ..+.+.+..+++++.+++.+||+.+|++|||+++|
T Consensus       249 --~~-------~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~i  285 (308)
T d1p4oa_         249 --ME-------GGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEI  285 (308)
T ss_dssp             --HT-------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             --Hh-------CCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHH
Confidence              11       11223355677789999999999999999999764

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.9e-42  Score=290.16  Aligned_cols=230  Identities=17%  Similarity=0.176  Sum_probs=168.6

Q ss_pred             cccccccceecccCceEEEEEE-ecCCceEEEEEeecCC--CchHHHHHHHHHHHhhcCCCcceeEeeEeecC-----Ce
Q 039276           31 LFLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQY--GGAFKNLDVECNMMKIIRHQNLIKIISSCSKD-----DF  102 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-----~~  102 (263)
                      .++|+..+.||+|+||+||+|+ ..+++.||||++....  ....+++.+|+++++.++|+|++++++++...     ..
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~   96 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN   96 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCC
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCc
Confidence            4679999999999999999999 4679999999997653  23456788999999999999999999998532     23


Q ss_pred             eEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCccccccc-----------------
Q 039276          103 KALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQIQ-----------------  165 (263)
Q Consensus       103 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~~-----------------  165 (263)
                      .+++++++.+|+|.+++...  .+++..+..++.|++.||+|||+++|+||||||+||+.+..                 
T Consensus        97 ~~~i~~~~~gg~L~~~~~~~--~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~~  174 (348)
T d2gfsa1          97 DVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE  174 (348)
T ss_dssp             CCEEEEECCSEEHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCC----CCTGG
T ss_pred             eEEEEEeecCCchhhhcccc--cccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccccccccchhcccCcc
Confidence            45667778899999998653  38999999999999999999999999999999999995432                 


Q ss_pred             ---ccccccccCc-------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCC-----------chhh
Q 039276          166 ---TLATISYMAP-------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPN-----------SVMK  218 (263)
Q Consensus       166 ---~~g~~~y~aP-------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~-----------~~~~  218 (263)
                         ..|++.|+||             |||||||++|+|++|+.||...... .............           ....
T Consensus       175 ~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~  253 (348)
T d2gfsa1         175 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPGAELLKKISSESARN  253 (348)
T ss_dssp             GSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCHHHHTTCCCHHHHH
T ss_pred             cccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCChHHhhhccchhhhh
Confidence               2568889999             9999999999999999999642111 0111111111000           0000


Q ss_pred             hhhhcccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          219 VVSANLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ...................+++++.+|+.+||+.||++|||++|+
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~el  298 (348)
T d2gfsa1         254 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQA  298 (348)
T ss_dssp             HHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             hhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHH
Confidence            000000000000000113456789999999999999999999874

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-41  Score=283.69  Aligned_cols=212  Identities=17%  Similarity=0.219  Sum_probs=170.9

Q ss_pred             cccccccceecccCceEEEEEEe-c---CCceEEEEEeecC----CCchHHHHHHHHHHHhhcCC-CcceeEeeEeecCC
Q 039276           31 LFLFSESNLISRGGFGSIYKAKI-Q---DGMEVVVKGFNLQ----YGGAFKNLDVECNMMKIIRH-QNLIKIISSCSKDD  101 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~-~---~~~~v~vK~~~~~----~~~~~~~~~~e~~~l~~~~h-~~i~~~~~~~~~~~  101 (263)
                      .++|+..+.||+|+||+||+|.. .   +|+.||||.+...    .....+.+.+|++++++++| |||+++++++.+..
T Consensus        23 l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~  102 (322)
T d1vzoa_          23 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET  102 (322)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred             hhceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCC
Confidence            46799999999999999999974 2   4789999998643    22345667789999999976 89999999999999


Q ss_pred             eeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-----------------
Q 039276          102 FKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-----------------  164 (263)
Q Consensus       102 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-----------------  164 (263)
                      ..++++||+.+++|.+++...+. .++..+..++.|++.||+|||+++++||||||+||+++.                 
T Consensus       103 ~~~~v~e~~~~~~L~~~i~~~~~-~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~~  181 (322)
T d1vzoa_         103 KLHLILDYINGGELFTHLSQRER-FTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVA  181 (322)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHSC-CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCG
T ss_pred             ceeeeeecccccHHHHHHHhccc-ccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeecCCCCEEEeeccchhhhcc
Confidence            99999999999999999987665 788899999999999999999999999999999999543                 


Q ss_pred             -------cccccccccCc--------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhc
Q 039276          165 -------QTLATISYMAP--------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSAN  223 (263)
Q Consensus       165 -------~~~g~~~y~aP--------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (263)
                             ...|++.|++|              |||||||++|||++|+.||......+....             +....
T Consensus       182 ~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~-------------i~~~~  248 (322)
T d1vzoa_         182 DETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAE-------------ISRRI  248 (322)
T ss_dssp             GGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHH-------------HHHHH
T ss_pred             cccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHH-------------HHHhc
Confidence                   23578888888              999999999999999999975422221111             11111


Q ss_pred             ccccccccccchHHHHHHHHHhhccccccCcCCCCCc
Q 039276          224 LLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINA  260 (263)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~  260 (263)
                      .    ....+.+..+++++.+++.+||+.||++|||+
T Consensus       249 ~----~~~~~~~~~~s~~~~~li~~~l~~dP~~R~s~  281 (322)
T d1vzoa_         249 L----KSEPPYPQEMSALAKDLIQRLLMKDPKKRLGC  281 (322)
T ss_dssp             H----HCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTS
T ss_pred             c----cCCCCCcccCCHHHHHHHHHHcccCHHHcCCC
Confidence            0    11112345678889999999999999999964

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=7.7e-41  Score=276.52  Aligned_cols=216  Identities=18%  Similarity=0.162  Sum_probs=162.8

Q ss_pred             cccccccceecccCceEEEEEEe-cCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcce-eEeeEeecCCeeEEEEe
Q 039276           31 LFLFSESNLISRGGFGSIYKAKI-QDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLI-KIISSCSKDDFKALILE  108 (263)
Q Consensus        31 ~~~y~~~~~lg~g~~g~v~~~~~-~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~~~~~~~~~~lv~e  108 (263)
                      .++|+..+.||+|+||.||+|.. .+++.||||++.....  .+.+..|+++++.++|++++ .+..++.+....++|||
T Consensus         6 g~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme   83 (299)
T d1ckia_           6 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME   83 (299)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT--SCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             CCEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc--CHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEE
Confidence            34699999999999999999984 5689999999876532  24567899999999876655 55555577788899999


Q ss_pred             ccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc------------------------
Q 039276          109 CMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI------------------------  164 (263)
Q Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~------------------------  164 (263)
                      ++. +++...+......+++..+..++.|++.||+|||+++|+||||||+||+...                        
T Consensus        84 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~  162 (299)
T d1ckia_          84 LLG-PSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH  162 (299)
T ss_dssp             CCC-CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTC
T ss_pred             EcC-CchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCcceeccccccc
Confidence            994 5777777666666999999999999999999999999999999999997211                        


Q ss_pred             ---------cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhhc
Q 039276          165 ---------QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSAN  223 (263)
Q Consensus       165 ---------~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (263)
                               ...||+.|+||            |||||||++|||++|+.||......+......          ......
T Consensus       163 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~----------~~~~~~  232 (299)
T d1ckia_         163 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYE----------RISEKK  232 (299)
T ss_dssp             CBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HH----------HHHHHH
T ss_pred             cceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHH----------Hhhccc
Confidence                     12589999999            99999999999999999997543222211100          000000


Q ss_pred             ccccccccccchHHHHHHHHHhhccccccCcCCCCCccC
Q 039276          224 LLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKE  262 (263)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~e  262 (263)
                      ....   .......+++++.+++.+||+.+|++||++++
T Consensus       233 ~~~~---~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~  268 (299)
T d1ckia_         233 MSTP---IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSY  268 (299)
T ss_dssp             HHSC---HHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHH
T ss_pred             CCCC---hhHhccCCCHHHHHHHHHHccCChhHCcCHHH
Confidence            0000   00012356778999999999999999999864

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=8.9e-40  Score=269.19  Aligned_cols=215  Identities=13%  Similarity=0.081  Sum_probs=168.0

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCC-CcceeEeeEeecCCeeEEEEec
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRH-QNLIKIISSCSKDDFKALILEC  109 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h-~~i~~~~~~~~~~~~~~lv~e~  109 (263)
                      .+|+..+.||+|+||.||+|+ ..+++.||||++....  ....+.+|++.++.+.| +|++.+++++.+....++|||+
T Consensus         5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~   82 (293)
T d1csna_           5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL   82 (293)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred             CceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc--CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEe
Confidence            359999999999999999999 4568999999986553  23446678999999865 8999999999999999999999


Q ss_pred             cCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc-------------------------
Q 039276          110 MPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI-------------------------  164 (263)
Q Consensus       110 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~-------------------------  164 (263)
                      + +++|.+++...+..++...+..++.|++.||+|||+++++||||||+||+...                         
T Consensus        83 ~-~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~  161 (293)
T d1csna_          83 L-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVT  161 (293)
T ss_dssp             C-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTT
T ss_pred             c-CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccceeEEcccCcc
Confidence            9 67999999877666999999999999999999999999999999999999531                         


Q ss_pred             ----------cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCCchhhhHhhhcCCCchhhhhhh
Q 039276          165 ----------QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGEMTLKHWVNDLLPNSVMKVVSA  222 (263)
Q Consensus       165 ----------~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (263)
                                ...||+.|+||            |||||||++|||++|+.||........... .         ..+...
T Consensus       162 ~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~-~---------~~i~~~  231 (293)
T d1csna_         162 KQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQK-Y---------ERIGEK  231 (293)
T ss_dssp             CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHH-H---------HHHHHH
T ss_pred             ccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHH-H---------HHHHhc
Confidence                      12489999999            999999999999999999975322221110 0         000000


Q ss_pred             cccccccccccchHHHHHHHHHhhccccccCcCCCCCccC
Q 039276          223 NLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKE  262 (263)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~e  262 (263)
                      .....   .......+++++.+++..|+..+|++||+++.
T Consensus       232 ~~~~~---~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~  268 (293)
T d1csna_         232 KQSTP---LRELCAGFPEEFYKYMHYARNLAFDATPDYDY  268 (293)
T ss_dssp             HHHSC---HHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHH
T ss_pred             cCCCC---hHHhcCCCCHHHHHHHHHHhcCCcccCcCHHH
Confidence            00000   00012345677999999999999999998753

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=9.2e-36  Score=252.13  Aligned_cols=231  Identities=13%  Similarity=0.136  Sum_probs=158.8

Q ss_pred             ccccccceecccCceEEEEEE-ecCCceEEEEEeecCCCchHHHHHHHHHHHhhcC-----------CCcceeEeeEeec
Q 039276           32 FLFSESNLISRGGFGSIYKAK-IQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIR-----------HQNLIKIISSCSK   99 (263)
Q Consensus        32 ~~y~~~~~lg~g~~g~v~~~~-~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~-----------h~~i~~~~~~~~~   99 (263)
                      ++|+..++||+|+||+||+|+ ..+|+.||||+++... ...+...+|+.+++.++           |+||+++++++..
T Consensus        13 ~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~-~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~   91 (362)
T d1q8ya_          13 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH   91 (362)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred             CcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc-cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeee
Confidence            359999999999999999999 4679999999997653 23456678888887764           5789999988754


Q ss_pred             --CCeeEEEEeccCCCC-Hhhhhh-hCCCcccHHHHHHHHHHHHHHHHHhcc-CCccccccCCCcccccc----------
Q 039276          100 --DDFKALILECMPHGS-LGKCLS-TSNYILDFFQRLHIMIDVASAVEYLHF-GHSTHLLLKEDQSLTQI----------  164 (263)
Q Consensus       100 --~~~~~lv~e~~~~~~-L~~~l~-~~~~~~~~~~~~~i~~~i~~~l~~lH~-~~i~h~dlk~~nil~~~----------  164 (263)
                        ....+++++++..+. ...... .....+++..++.++.|++.||+|||+ .+|+||||||+||++..          
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~~  171 (362)
T d1q8ya_          92 KGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQI  171 (362)
T ss_dssp             EETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEE
T ss_pred             ccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCccccccee
Confidence              345666666654443 222222 233448889999999999999999997 88999999999999542          


Q ss_pred             ----------------cccccccccCc------------chhhHHHHHHHHHhCCCCCccccCCC-----chhhhHhhhc
Q 039276          165 ----------------QTLATISYMAP------------DTYNFGIMIMETFSGKKPTIKFFHGE-----MTLKHWVNDL  211 (263)
Q Consensus       165 ----------------~~~g~~~y~aP------------Dv~SlG~il~ell~g~~Pf~~~~~~~-----~~~~~~~~~~  211 (263)
                                      ...||+.|+||            ||||+||++++|++|+.||.......     ..+.......
T Consensus       172 kl~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~l  251 (362)
T d1q8ya_         172 KIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELL  251 (362)
T ss_dssp             EECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHH
T ss_pred             eEeecccccccccccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHh
Confidence                            22578899999            99999999999999999997432110     1111111111


Q ss_pred             CCCchhhhhh------------------h----cccccccccccchHHHHHHHHHhhccccccCcCCCCCccCC
Q 039276          212 LPNSVMKVVS------------------A----NLLSREDEHFMTKEQCMSFVFNLAMECTVESPNQRINAKEM  263 (263)
Q Consensus       212 ~~~~~~~~~~------------------~----~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~p~~Rpt~~ev  263 (263)
                      ..........                  .    ................++++.+|+.+||..||.+|||++|+
T Consensus       252 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~  325 (362)
T d1q8ya_         252 GELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGL  325 (362)
T ss_dssp             CSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHH
T ss_pred             CCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHH
Confidence            1100000000                  0    00000011122346778899999999999999999998764

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.79  E-value=2.3e-19  Score=137.35  Aligned_cols=119  Identities=13%  Similarity=0.051  Sum_probs=91.5

Q ss_pred             ccccceecccCceEEEEEEecCCceEEEEEeecCCC------------------chHHHHHHHHHHHhhcCCCcceeEee
Q 039276           34 FSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYG------------------GAFKNLDVECNMMKIIRHQNLIKIIS   95 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~------------------~~~~~~~~e~~~l~~~~h~~i~~~~~   95 (263)
                      +..+++||+|+||.||+|...+|+.||||++.....                  ........|+..+..+.|.+++..++
T Consensus         2 ~~vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~   81 (191)
T d1zara2           2 DAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYA   81 (191)
T ss_dssp             SEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEE
T ss_pred             chhCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEE
Confidence            346789999999999999987899999998753210                  01122345788899999999998876


Q ss_pred             EeecCCeeEEEEeccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCccccccCCCcccccc
Q 039276           96 SCSKDDFKALILECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHSTHLLLKEDQSLTQI  164 (263)
Q Consensus        96 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk~~nil~~~  164 (263)
                      +.    ..+++||++++..+.++        +......++.|++.+++|||.++++||||||+||+...
T Consensus        82 ~~----~~~lvme~~~~~~~~~l--------~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~  138 (191)
T d1zara2          82 WE----GNAVLMELIDAKELYRV--------RVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSE  138 (191)
T ss_dssp             EE----TTEEEEECCCCEEGGGC--------CCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEET
T ss_pred             ec----CCEEEEEeeccccccch--------hhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeeeC
Confidence            53    23799999988655432        22334578999999999999999999999999999754

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=97.97  E-value=1.6e-05  Score=61.83  Aligned_cols=85  Identities=13%  Similarity=0.117  Sum_probs=58.3

Q ss_pred             ccccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcC-CCcceeEeeEeecCCeeEEEEeccCC
Q 039276           34 FSESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIR-HQNLIKIISSCSKDDFKALILECMPH  112 (263)
Q Consensus        34 y~~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~lv~e~~~~  112 (263)
                      |+..+..+-++.+.||+...+ +..+++|............+..|...+..+. +--+.+++.+..+.+..++||+++++
T Consensus        16 ~~~~~~~~G~s~~~v~rv~~~-~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~G   94 (263)
T d1j7la_          16 YRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADG   94 (263)
T ss_dssp             SEEEECSCCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSS
T ss_pred             eEEEEcCCCCCCCcEEEEEeC-CCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEeccc
Confidence            444443333344689987644 6678888876654444445667888877663 44467788887788889999999999


Q ss_pred             CCHhhhh
Q 039276          113 GSLGKCL  119 (263)
Q Consensus       113 ~~L~~~l  119 (263)
                      .++.+..
T Consensus        95 ~~~~~~~  101 (263)
T d1j7la_          95 VLCSEEY  101 (263)
T ss_dssp             EEHHHHT
T ss_pred             ccccccc
Confidence            8876544

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=97.37  E-value=0.00075  Score=51.60  Aligned_cols=75  Identities=13%  Similarity=0.097  Sum_probs=52.5

Q ss_pred             eecccCc-eEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCC--CcceeEeeEeecCCeeEEEEeccCCCCH
Q 039276           39 LISRGGF-GSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRH--QNLIKIISSCSKDDFKALILECMPHGSL  115 (263)
Q Consensus        39 ~lg~g~~-g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h--~~i~~~~~~~~~~~~~~lv~e~~~~~~L  115 (263)
                      .+..|.. +.||+....++..+++|......   ...+..|.+.++.+..  -.+.+++.+..+.+..+++|+++++.++
T Consensus        17 ~~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~---~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~   93 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA---LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL   93 (255)
T ss_dssp             ECSCTTSSCEEEEEECTTSCCEEEEEECSCT---TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred             EcCCcccCCeEEEEEeCCCCEEEEEeCCccC---HhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeecccc
Confidence            3455543 67899887778888999866543   2345667887776643  3356777777777888999999988655


Q ss_pred             h
Q 039276          116 G  116 (263)
Q Consensus       116 ~  116 (263)
                      .
T Consensus        94 ~   94 (255)
T d1nd4a_          94 L   94 (255)
T ss_dssp             T
T ss_pred             c
Confidence            3

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=96.87  E-value=0.0059  Score=49.91  Aligned_cols=76  Identities=12%  Similarity=0.183  Sum_probs=48.2

Q ss_pred             cceecccCceEEEEEEec-CCceEEEEEeecC-------CCchHHHHHHHHHHHhhcC-C--CcceeEeeEeecCCeeEE
Q 039276           37 SNLISRGGFGSIYKAKIQ-DGMEVVVKGFNLQ-------YGGAFKNLDVECNMMKIIR-H--QNLIKIISSCSKDDFKAL  105 (263)
Q Consensus        37 ~~~lg~g~~g~v~~~~~~-~~~~v~vK~~~~~-------~~~~~~~~~~e~~~l~~~~-h--~~i~~~~~~~~~~~~~~l  105 (263)
                      .+.+|.|....||+.... +++.+++|.-...       ..-...+...|.+.++.+. +  ..+++++.+  +....++
T Consensus        31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~~~~l  108 (392)
T d2pula1          31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT  108 (392)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred             EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cCCCCEE
Confidence            556899999999999854 4678999975421       1123345556887777662 2  345566654  3444579


Q ss_pred             EEeccCCCC
Q 039276          106 ILECMPHGS  114 (263)
Q Consensus       106 v~e~~~~~~  114 (263)
                      +||++.+..
T Consensus       109 vmE~L~~~~  117 (392)
T d2pula1         109 VMEDLSHLK  117 (392)
T ss_dssp             EECCCTTSE
T ss_pred             EEeccCCcc
Confidence            999987643

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=92.27  E-value=0.28  Score=38.27  Aligned_cols=66  Identities=11%  Similarity=0.104  Sum_probs=42.8

Q ss_pred             eEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcCCCcce--eEee-----EeecCCeeEEEEeccCC
Q 039276           46 GSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIRHQNLI--KIIS-----SCSKDDFKALILECMPH  112 (263)
Q Consensus        46 g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~--~~~~-----~~~~~~~~~lv~e~~~~  112 (263)
                      ..||+....+|..+++|+..... ....++..|.+.+..+...++.  ....     .+...+..+.++++++|
T Consensus        36 N~vy~v~~~dg~~~VlK~~rp~~-~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G  108 (325)
T d1zyla1          36 NRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGG  108 (325)
T ss_dssp             SEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCC
T ss_pred             ceeEEEEcCCCCEEEEEEeCCCC-CCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCC
Confidence            58999998889999999876542 2346677788877776422221  1111     11234567888888865

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=91.88  E-value=0.23  Score=38.45  Aligned_cols=48  Identities=10%  Similarity=0.104  Sum_probs=27.6

Q ss_pred             ccceecccCceEEEEEEecCCceEEEEEeecCCCchHHHHHHHHHHHhhcC
Q 039276           36 ESNLISRGGFGSIYKAKIQDGMEVVVKGFNLQYGGAFKNLDVECNMMKIIR   86 (263)
Q Consensus        36 ~~~~lg~g~~g~v~~~~~~~~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~   86 (263)
                      ....+..|--.+.|+....+| ++++|++....  ..+.+..|++++..+.
T Consensus        22 ~~~~i~~G~~N~ny~v~t~~g-~yVLri~~~~~--~~~~l~~~~~~l~~L~   69 (316)
T d2ppqa1          22 SYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLA   69 (316)
T ss_dssp             EEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHH
T ss_pred             EeecCCCCcccCeEEEEECCC-cEEEEEcCCCC--CHHHHHHHHHHHHhhh
Confidence            344556676678898876644 58999986542  2344555666666663

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=85.59  E-value=2.8  Score=33.15  Aligned_cols=100  Identities=14%  Similarity=0.124  Sum_probs=63.6

Q ss_pred             cceecccCceEEEEEEecC--------CceEEEEEeecCCCchHHHHHHHHHHHhhcC-CCcceeEeeEeecCCeeEEEE
Q 039276           37 SNLISRGGFGSIYKAKIQD--------GMEVVVKGFNLQYGGAFKNLDVECNMMKIIR-HQNLIKIISSCSKDDFKALIL  107 (263)
Q Consensus        37 ~~~lg~g~~g~v~~~~~~~--------~~~v~vK~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~lv~  107 (263)
                      .+.|+-|-...+|+....+        ...|++++.. .. .......+|..+++.+. +.-..++++++.+    ++|+
T Consensus        47 v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g-~~-~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~----g~I~  120 (395)
T d1nw1a_          47 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYF-NP-ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE  120 (395)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEEC-SC-CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred             EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecC-Cc-chhhHHHHHHHHHHHHHhCCCCCeEEEEcCC----ceEE
Confidence            4567788888999987543        3456777665 32 22344567888888884 4334577777643    6899


Q ss_pred             eccCCCCHhhhhhhCCCcccHHHHHHHHHHHHHHHHHhccCCcc
Q 039276          108 ECMPHGSLGKCLSTSNYILDFFQRLHIMIDVASAVEYLHFGHST  151 (263)
Q Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~  151 (263)
                      ||+++.++...-    . ..    -.+..+++..|+-+|...+.
T Consensus       121 efi~g~~l~~~d----~-~~----~~~~~~iA~~La~lH~~~~~  155 (395)
T d1nw1a_         121 EYIPSRPLSCHE----I-SL----AHMSTKIAKRVAKVHQLEVP  155 (395)
T ss_dssp             CCCCEEECCTTG----G-GS----HHHHHHHHHHHHHHTTCCCS
T ss_pred             EEeccccCChhh----c-cc----hhhhHHHHHHHHHHhhcccc
Confidence            999875543211    0 11    23567788889999976543