Query 039283
Match_columns 600
No_of_seqs 432 out of 2918
Neff 9.2
Searched_HMMs 13730
Date Mon Mar 25 13:39:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039283.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/039283hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2a5yb3 c.37.1.20 (B:109-385) 100.0 2E-39 1.5E-43 320.4 20.6 247 183-447 19-277 (277)
2 d2fnaa2 c.37.1.20 (A:1-283) Ar 99.3 1.2E-11 8.5E-16 120.0 12.0 197 182-401 10-255 (283)
3 d1fnna2 c.37.1.20 (A:1-276) CD 99.0 6.8E-09 4.9E-13 99.7 20.7 177 183-361 15-205 (276)
4 d1sxjc2 c.37.1.20 (C:12-238) R 98.9 1.1E-08 8.3E-13 95.5 13.7 180 184-389 14-195 (227)
5 d1sxjb2 c.37.1.20 (B:7-230) Re 98.8 1.2E-08 8.4E-13 95.3 13.4 183 184-391 15-199 (224)
6 d1sxjd2 c.37.1.20 (D:26-262) R 98.8 1.6E-08 1.2E-12 95.0 14.0 190 184-389 12-204 (237)
7 d1njfa_ c.37.1.20 (A:) delta p 98.8 4.2E-08 3E-12 92.3 16.2 195 184-394 12-217 (239)
8 d1r6bx2 c.37.1.20 (X:169-436) 98.8 3.8E-08 2.8E-12 93.1 14.4 155 185-361 19-194 (268)
9 d1w5sa2 c.37.1.20 (A:7-293) CD 98.8 3E-07 2.2E-11 88.3 21.2 180 182-361 14-222 (287)
10 d1iqpa2 c.37.1.20 (A:2-232) Re 98.7 2.7E-08 2E-12 93.1 12.1 180 184-390 24-206 (231)
11 d1sxje2 c.37.1.20 (E:4-255) Re 98.7 5.7E-09 4.1E-13 99.2 6.0 192 184-390 11-229 (252)
12 d1jbka_ c.37.1.20 (A:) ClpB, A 98.6 1.2E-07 9.1E-12 84.5 11.2 152 185-357 23-194 (195)
13 d1a5ta2 c.37.1.20 (A:1-207) de 98.6 5.6E-07 4.1E-11 82.2 15.8 180 190-391 8-201 (207)
14 d1sxja2 c.37.1.20 (A:295-547) 98.4 1.4E-06 1E-10 82.2 13.1 193 184-392 14-225 (253)
15 d1ixsb2 c.37.1.20 (B:4-242) Ho 98.4 1.9E-06 1.4E-10 80.5 13.9 179 184-395 9-208 (239)
16 d1in4a2 c.37.1.20 (A:17-254) H 98.3 2.3E-06 1.7E-10 79.9 12.7 177 184-394 9-206 (238)
17 d1qvra2 c.37.1.20 (A:149-535) 98.3 9.5E-07 7E-11 88.1 9.4 155 185-361 23-197 (387)
18 d1e32a2 c.37.1.20 (A:201-458) 98.1 3E-05 2.2E-09 73.0 16.3 179 185-389 5-208 (258)
19 d1l8qa2 c.37.1.20 (A:77-289) C 98.1 2.6E-05 1.9E-09 71.0 14.9 172 185-384 12-197 (213)
20 d1lv7a_ c.37.1.20 (A:) AAA dom 98.1 1.8E-05 1.3E-09 74.3 13.7 179 184-388 12-217 (256)
21 d1ixza_ c.37.1.20 (A:) AAA dom 98.1 2.6E-05 1.9E-09 72.7 14.9 179 184-388 9-214 (247)
22 d1r7ra3 c.37.1.20 (A:471-735) 97.9 3.6E-05 2.6E-09 72.6 11.9 180 185-390 8-215 (265)
23 d1d2na_ c.37.1.20 (A:) Hexamer 97.8 2.7E-05 2E-09 72.6 10.1 48 184-234 9-63 (246)
24 d2gnoa2 c.37.1.20 (A:11-208) g 97.7 7.1E-05 5.2E-09 67.1 9.8 133 192-348 2-138 (198)
25 d1r6bx3 c.37.1.20 (X:437-751) 97.2 0.00021 1.6E-08 69.0 7.1 133 185-330 23-171 (315)
26 d1qvra3 c.37.1.20 (A:536-850) 97.1 0.00035 2.5E-08 67.3 7.4 120 186-315 25-149 (315)
27 d1xp8a1 c.37.1.11 (A:15-282) R 97.0 0.0013 9.1E-08 61.4 9.9 85 209-300 55-144 (268)
28 d1mo6a1 c.37.1.11 (A:1-269) Re 97.0 0.0017 1.2E-07 60.5 10.3 86 209-301 58-148 (269)
29 d2qy9a2 c.37.1.10 (A:285-495) 96.8 0.0029 2.1E-07 56.4 9.9 91 208-301 6-101 (211)
30 d1u94a1 c.37.1.11 (A:6-268) Re 96.7 0.0022 1.6E-07 59.7 9.2 84 210-300 53-141 (263)
31 d1lw7a2 c.37.1.1 (A:220-411) T 96.7 0.00041 3E-08 60.8 3.5 24 210-233 6-29 (192)
32 d1ly1a_ c.37.1.1 (A:) Polynucl 96.6 0.00047 3.4E-08 58.4 3.5 22 212-233 3-24 (152)
33 d1np6a_ c.37.1.10 (A:) Molybdo 96.6 0.00052 3.8E-08 59.2 3.7 24 211-234 2-25 (170)
34 d1kaga_ c.37.1.2 (A:) Shikimat 96.6 0.00037 2.7E-08 59.7 2.6 23 212-234 3-25 (169)
35 d1ny5a2 c.37.1.20 (A:138-384) 96.6 0.0044 3.2E-07 57.0 10.2 45 185-233 1-45 (247)
36 d1gvnb_ c.37.1.21 (B:) Plasmid 96.6 0.001 7.3E-08 62.3 5.7 42 192-234 14-55 (273)
37 d1m8pa3 c.37.1.15 (A:391-573) 96.6 0.0007 5.1E-08 58.9 4.1 25 210-234 5-29 (183)
38 d2bdta1 c.37.1.25 (A:1-176) Hy 96.5 0.00058 4.2E-08 59.0 3.4 22 212-233 3-24 (176)
39 d2i3ba1 c.37.1.11 (A:1-189) Ca 96.5 0.00052 3.8E-08 60.0 3.1 24 212-235 2-25 (189)
40 d1rz3a_ c.37.1.6 (A:) Hypothet 96.5 0.002 1.5E-07 56.8 7.1 39 193-234 7-45 (198)
41 d1x6va3 c.37.1.4 (A:34-228) Ad 96.5 0.001 7.4E-08 58.8 4.6 36 210-247 18-53 (195)
42 d1knqa_ c.37.1.17 (A:) Glucona 96.4 0.001 7.6E-08 57.3 4.1 26 209-234 4-29 (171)
43 d1qf9a_ c.37.1.1 (A:) UMP/CMP 96.4 0.0011 7.7E-08 58.9 4.1 26 209-234 4-29 (194)
44 d1rkba_ c.37.1.1 (A:) Adenylat 96.3 0.00068 5E-08 58.6 2.7 22 212-233 5-26 (173)
45 d1ukza_ c.37.1.1 (A:) Uridylat 96.2 0.0014 1E-07 58.1 4.0 26 209-234 6-31 (196)
46 d1y63a_ c.37.1.1 (A:) Probable 96.2 0.0014 1E-07 56.6 3.8 25 209-233 3-27 (174)
47 d1qhxa_ c.37.1.3 (A:) Chloramp 96.2 0.0012 9E-08 57.0 3.4 23 211-233 3-25 (178)
48 d1ls1a2 c.37.1.10 (A:89-295) G 96.1 0.02 1.5E-06 50.7 11.5 58 209-269 8-67 (207)
49 d1j8yf2 c.37.1.10 (F:87-297) G 96.1 0.0071 5.2E-07 53.9 8.4 60 208-269 9-69 (211)
50 d1ofha_ c.37.1.20 (A:) HslU {H 96.1 0.00059 4.3E-08 65.6 1.0 50 185-234 15-72 (309)
51 d1yj5a2 c.37.1.1 (A:351-522) 5 96.1 0.0015 1.1E-07 56.7 3.6 25 209-233 12-36 (172)
52 d1vmaa2 c.37.1.10 (A:82-294) G 96.1 0.01 7.4E-07 52.9 9.2 91 209-301 9-103 (213)
53 d1okkd2 c.37.1.10 (D:97-303) G 96.1 0.007 5.1E-07 53.8 8.0 59 209-269 4-63 (207)
54 d1zp6a1 c.37.1.25 (A:6-181) Hy 96.0 0.0019 1.4E-07 55.8 3.8 23 211-233 4-26 (176)
55 d1bifa1 c.37.1.7 (A:37-249) 6- 96.0 0.0018 1.3E-07 57.9 3.6 24 211-234 2-25 (213)
56 d1khta_ c.37.1.1 (A:) Adenylat 96.0 0.0017 1.3E-07 56.6 3.4 23 212-234 2-24 (190)
57 d1sq5a_ c.37.1.6 (A:) Pantothe 96.0 0.012 8.5E-07 55.7 9.5 81 208-292 77-160 (308)
58 d2iyva1 c.37.1.2 (A:2-166) Shi 95.9 0.0017 1.2E-07 55.9 3.1 21 214-234 4-24 (165)
59 d1tf7a2 c.37.1.11 (A:256-497) 95.9 0.0045 3.3E-07 56.6 6.0 42 209-252 24-65 (242)
60 d1ye8a1 c.37.1.11 (A:1-178) Hy 95.8 0.0018 1.3E-07 56.1 3.0 21 214-234 3-23 (178)
61 d1l2ta_ c.37.1.12 (A:) MJ0796 95.8 0.019 1.4E-06 51.7 9.9 54 283-336 155-211 (230)
62 d2awna2 c.37.1.12 (A:4-235) Ma 95.8 0.0038 2.8E-07 56.5 5.1 22 212-233 27-48 (232)
63 d1w44a_ c.37.1.11 (A:) NTPase 95.8 0.01 7.5E-07 56.3 8.4 22 212-233 124-145 (321)
64 d1xjca_ c.37.1.10 (A:) Molybdo 95.8 0.0025 1.8E-07 54.7 3.6 24 212-235 2-25 (165)
65 d1viaa_ c.37.1.2 (A:) Shikimat 95.8 0.0022 1.6E-07 55.0 3.0 21 214-234 3-23 (161)
66 d1e6ca_ c.37.1.2 (A:) Shikimat 95.6 0.0023 1.7E-07 55.3 2.7 22 213-234 4-25 (170)
67 d1teva_ c.37.1.1 (A:) UMP/CMP 95.6 0.003 2.2E-07 55.7 3.6 24 211-234 1-24 (194)
68 d1ckea_ c.37.1.1 (A:) CMP kina 95.5 0.0034 2.4E-07 56.6 3.4 24 211-234 3-26 (225)
69 d1nksa_ c.37.1.1 (A:) Adenylat 95.4 0.0064 4.7E-07 53.0 5.1 23 212-234 2-24 (194)
70 d1odfa_ c.37.1.6 (A:) Hypothet 95.4 0.024 1.8E-06 52.8 9.3 82 209-290 25-113 (286)
71 d1m7ga_ c.37.1.4 (A:) Adenosin 95.4 0.0063 4.6E-07 54.4 4.9 26 209-234 22-47 (208)
72 d2p67a1 c.37.1.10 (A:1-327) LA 95.4 0.0086 6.3E-07 57.4 6.1 66 194-263 41-106 (327)
73 d2qm8a1 c.37.1.10 (A:5-327) Me 95.4 0.0083 6E-07 57.4 5.9 39 193-235 37-75 (323)
74 d1uj2a_ c.37.1.6 (A:) Uridine- 95.3 0.0047 3.4E-07 55.4 3.6 24 211-234 2-25 (213)
75 d2jdid3 c.37.1.11 (D:82-357) C 95.2 0.032 2.3E-06 51.4 9.2 64 195-264 57-121 (276)
76 d1zaka1 c.37.1.1 (A:3-127,A:15 95.2 0.0041 3E-07 54.6 2.9 23 212-234 4-26 (189)
77 d1xpua3 c.37.1.11 (A:129-417) 95.1 0.015 1.1E-06 54.0 6.7 47 195-247 32-78 (289)
78 d3adka_ c.37.1.1 (A:) Adenylat 95.0 0.0058 4.3E-07 53.8 3.3 24 210-233 7-30 (194)
79 d1zina1 c.37.1.1 (A:1-125,A:16 95.0 0.0057 4.1E-07 53.1 3.1 21 214-234 3-23 (182)
80 d1q3ta_ c.37.1.1 (A:) CMP kina 94.9 0.0061 4.5E-07 54.9 3.3 44 212-268 4-47 (223)
81 d2ak3a1 c.37.1.1 (A:0-124,A:16 94.9 0.0081 5.9E-07 52.7 3.8 24 210-233 5-28 (189)
82 d1znwa1 c.37.1.1 (A:20-201) Gu 94.8 0.0067 4.9E-07 52.8 3.2 22 212-233 3-24 (182)
83 d1ak2a1 c.37.1.1 (A:14-146,A:1 94.8 0.0084 6.1E-07 52.5 3.8 23 210-233 3-25 (190)
84 d2cdna1 c.37.1.1 (A:1-181) Ade 94.8 0.0067 4.9E-07 52.7 3.1 22 213-234 2-23 (181)
85 d1ihua2 c.37.1.10 (A:308-586) 94.7 0.02 1.4E-06 53.4 6.5 37 192-234 7-43 (279)
86 d1s3ga1 c.37.1.1 (A:1-125,A:16 94.7 0.0074 5.4E-07 52.5 3.1 22 213-234 2-23 (182)
87 d1lvga_ c.37.1.1 (A:) Guanylat 94.6 0.0065 4.7E-07 53.4 2.6 21 213-233 2-22 (190)
88 d1gkya_ c.37.1.1 (A:) Guanylat 94.6 0.0068 5E-07 53.1 2.7 22 212-233 2-23 (186)
89 d1uf9a_ c.37.1.1 (A:) Dephosph 94.6 0.009 6.6E-07 52.4 3.5 23 210-232 2-24 (191)
90 d1ihua1 c.37.1.10 (A:1-296) Ar 94.6 0.019 1.4E-06 53.8 6.2 44 209-254 6-49 (296)
91 d2vp4a1 c.37.1.1 (A:12-208) De 94.5 0.0094 6.9E-07 52.4 3.3 25 209-233 7-31 (197)
92 d1akya1 c.37.1.1 (A:3-130,A:16 94.3 0.011 7.8E-07 51.4 3.1 21 214-234 5-25 (180)
93 d1e4va1 c.37.1.1 (A:1-121,A:15 94.3 0.01 7.6E-07 51.3 3.0 22 213-234 2-23 (179)
94 d1kgda_ c.37.1.1 (A:) Guanylat 94.2 0.011 8.2E-07 51.2 3.2 22 212-233 4-25 (178)
95 d1w36d1 c.37.1.19 (D:2-360) Ex 94.2 0.023 1.7E-06 55.0 5.7 63 190-261 151-214 (359)
96 d1g8pa_ c.37.1.20 (A:) ATPase 94.1 0.0087 6.4E-07 57.7 2.4 45 183-233 6-50 (333)
97 d1szpa2 c.37.1.11 (A:145-395) 94.1 0.023 1.7E-06 51.5 5.2 49 209-257 32-84 (251)
98 d1pzna2 c.37.1.11 (A:96-349) D 94.0 0.046 3.4E-06 49.6 7.3 50 209-258 34-87 (254)
99 d1yrba1 c.37.1.10 (A:1-244) AT 93.7 0.016 1.2E-06 52.6 3.3 22 213-234 2-23 (244)
100 d1s96a_ c.37.1.1 (A:) Guanylat 93.7 0.016 1.2E-06 51.4 3.2 22 212-233 3-24 (205)
101 d1nn5a_ c.37.1.1 (A:) Thymidyl 93.6 0.16 1.2E-05 44.7 9.9 23 212-234 4-26 (209)
102 d1cp2a_ c.37.1.10 (A:) Nitroge 93.6 0.037 2.7E-06 51.1 5.8 37 212-250 2-38 (269)
103 d1r8sa_ c.37.1.8 (A:) ADP-ribo 93.6 0.017 1.2E-06 48.4 3.0 21 214-234 3-23 (160)
104 d2ocpa1 c.37.1.1 (A:37-277) De 93.4 0.021 1.5E-06 51.9 3.6 25 210-234 1-25 (241)
105 d1svma_ c.37.1.20 (A:) Papillo 93.3 0.032 2.3E-06 54.0 4.9 26 209-234 152-177 (362)
106 d1svia_ c.37.1.8 (A:) Probable 93.2 0.026 1.9E-06 49.4 3.7 26 208-233 20-45 (195)
107 d1cr2a_ c.37.1.11 (A:) Gene 4 93.2 0.13 9.4E-06 47.4 9.0 54 212-268 36-89 (277)
108 d1sgwa_ c.37.1.12 (A:) Putativ 93.1 0.018 1.3E-06 50.8 2.5 22 212-233 28-49 (200)
109 d1v5wa_ c.37.1.11 (A:) Meiotic 93.1 0.1 7.6E-06 47.1 8.1 47 209-255 35-85 (258)
110 d1a7ja_ c.37.1.6 (A:) Phosphor 93.1 0.015 1.1E-06 54.2 1.8 80 210-291 3-90 (288)
111 d1upta_ c.37.1.8 (A:) ADP-ribo 93.0 0.023 1.7E-06 48.0 2.9 22 213-234 7-28 (169)
112 d1g2912 c.37.1.12 (1:1-240) Ma 92.9 0.025 1.8E-06 51.2 3.2 22 212-233 30-51 (240)
113 d3dhwc1 c.37.1.12 (C:1-240) Me 92.9 0.023 1.7E-06 51.4 3.0 22 212-233 32-53 (240)
114 d1a1va1 c.37.1.14 (A:190-325) 92.9 0.15 1.1E-05 41.2 8.0 50 209-264 6-55 (136)
115 d2pmka1 c.37.1.12 (A:467-707) 92.8 0.025 1.9E-06 51.3 3.1 22 212-233 30-51 (241)
116 d3b60a1 c.37.1.12 (A:329-581) 92.8 0.027 2E-06 51.6 3.2 22 212-233 42-63 (253)
117 d1n0wa_ c.37.1.11 (A:) DNA rep 92.8 0.023 1.7E-06 50.4 2.7 26 210-235 22-47 (242)
118 d1mv5a_ c.37.1.12 (A:) Multidr 92.8 0.031 2.3E-06 50.8 3.6 23 211-233 28-50 (242)
119 d4tmka_ c.37.1.1 (A:) Thymidyl 92.7 0.15 1.1E-05 44.9 8.2 24 212-235 3-26 (210)
120 d2a5ja1 c.37.1.8 (A:9-181) Rab 92.7 0.027 1.9E-06 48.3 2.9 21 214-234 6-26 (173)
121 d1p5zb_ c.37.1.1 (B:) Deoxycyt 92.6 0.021 1.6E-06 51.7 2.3 24 211-234 2-25 (241)
122 d1z0fa1 c.37.1.8 (A:8-173) Rab 92.6 0.028 2E-06 47.8 2.9 22 213-234 6-27 (166)
123 d1jj7a_ c.37.1.12 (A:) Peptide 92.6 0.031 2.2E-06 51.1 3.3 23 211-233 40-62 (251)
124 d1v43a3 c.37.1.12 (A:7-245) Hy 92.6 0.03 2.2E-06 50.6 3.2 22 212-233 33-54 (239)
125 d1b0ua_ c.37.1.12 (A:) ATP-bin 92.5 0.029 2.1E-06 51.5 3.0 22 212-233 29-50 (258)
126 d2jdia3 c.37.1.11 (A:95-379) C 92.5 0.2 1.5E-05 46.2 9.0 35 195-234 57-91 (285)
127 d1z2aa1 c.37.1.8 (A:8-171) Rab 92.5 0.03 2.2E-06 47.4 3.0 21 214-234 5-25 (164)
128 d1z06a1 c.37.1.8 (A:32-196) Ra 92.4 0.03 2.2E-06 47.4 2.9 22 213-234 4-25 (165)
129 d2onka1 c.37.1.12 (A:1-240) Mo 92.4 0.032 2.3E-06 50.4 3.2 22 212-233 25-46 (240)
130 d1g41a_ c.37.1.20 (A:) HslU {H 92.4 0.049 3.6E-06 54.2 4.9 50 184-233 14-71 (443)
131 d3d31a2 c.37.1.12 (A:1-229) Su 92.3 0.029 2.1E-06 50.3 2.7 22 212-233 27-48 (229)
132 d1fx0a3 c.37.1.11 (A:97-372) C 92.3 0.091 6.6E-06 48.4 6.3 40 212-253 68-107 (276)
133 d2afhe1 c.37.1.10 (E:1-289) Ni 92.3 0.039 2.8E-06 51.6 3.8 38 212-251 3-40 (289)
134 d1gsia_ c.37.1.1 (A:) Thymidyl 92.2 0.041 3E-06 48.5 3.7 22 213-234 2-23 (208)
135 d1kaoa_ c.37.1.8 (A:) Rap2a {H 92.2 0.034 2.4E-06 47.2 2.9 22 213-234 5-26 (167)
136 d2i1qa2 c.37.1.11 (A:65-322) D 92.2 0.081 5.9E-06 47.6 5.9 26 210-235 33-58 (258)
137 d1z08a1 c.37.1.8 (A:17-183) Ra 92.2 0.033 2.4E-06 47.3 2.9 22 213-234 5-26 (167)
138 d2erxa1 c.37.1.8 (A:6-176) di- 92.1 0.034 2.5E-06 47.4 2.9 21 214-234 5-25 (171)
139 d1vhta_ c.37.1.1 (A:) Dephosph 92.1 0.035 2.5E-06 49.3 3.0 19 213-231 5-23 (208)
140 d1r0wa_ c.37.1.12 (A:) Cystic 92.1 0.037 2.7E-06 51.5 3.4 23 211-233 62-84 (281)
141 d1ksha_ c.37.1.8 (A:) ADP-ribo 92.1 0.035 2.5E-06 47.0 2.9 22 213-234 4-25 (165)
142 d2ew1a1 c.37.1.8 (A:4-174) Rab 92.1 0.034 2.5E-06 47.4 2.8 22 213-234 7-28 (171)
143 d3raba_ c.37.1.8 (A:) Rab3a {R 92.1 0.036 2.6E-06 47.2 2.9 22 213-234 7-28 (169)
144 d1yzqa1 c.37.1.8 (A:14-177) Ra 92.0 0.035 2.6E-06 46.9 2.8 21 214-234 3-23 (164)
145 d1nija1 c.37.1.10 (A:2-223) Hy 92.0 0.036 2.6E-06 49.7 3.0 25 210-234 2-26 (222)
146 d1jjva_ c.37.1.1 (A:) Dephosph 92.0 0.037 2.7E-06 48.9 3.0 20 212-231 3-22 (205)
147 d2atva1 c.37.1.8 (A:5-172) Ras 92.0 0.037 2.7E-06 47.1 2.9 21 214-234 5-25 (168)
148 d1z0ja1 c.37.1.8 (A:2-168) Rab 91.9 0.038 2.8E-06 46.9 2.9 21 214-234 7-27 (167)
149 d2fn4a1 c.37.1.8 (A:24-196) r- 91.9 0.037 2.7E-06 47.3 2.8 23 212-234 7-29 (173)
150 d1r2qa_ c.37.1.8 (A:) Rab5a {H 91.8 0.039 2.9E-06 47.0 2.9 22 213-234 8-29 (170)
151 d2gjsa1 c.37.1.8 (A:91-258) Ra 91.8 0.04 2.9E-06 46.8 3.0 21 214-234 4-24 (168)
152 d2f7sa1 c.37.1.8 (A:5-190) Rab 91.8 0.038 2.8E-06 47.8 2.8 22 213-234 7-28 (186)
153 d1g16a_ c.37.1.8 (A:) Rab-rela 91.7 0.04 2.9E-06 46.7 2.8 22 213-234 4-25 (166)
154 d1ky3a_ c.37.1.8 (A:) Rab-rela 91.7 0.042 3E-06 47.0 2.9 22 213-234 4-25 (175)
155 d1u0la2 c.37.1.8 (A:69-293) Pr 91.7 0.069 5.1E-06 47.5 4.5 32 193-233 86-117 (225)
156 d2erya1 c.37.1.8 (A:10-180) r- 91.7 0.041 3E-06 46.9 2.8 22 213-234 7-28 (171)
157 d1hyqa_ c.37.1.10 (A:) Cell di 91.6 0.08 5.8E-06 47.3 5.0 37 212-250 2-39 (232)
158 d1tmka_ c.37.1.1 (A:) Thymidyl 91.6 0.049 3.6E-06 48.5 3.4 24 211-234 3-26 (214)
159 d1c1ya_ c.37.1.8 (A:) Rap1A {H 91.6 0.043 3.1E-06 46.5 2.9 21 214-234 6-26 (167)
160 d1ctqa_ c.37.1.8 (A:) cH-p21 R 91.5 0.043 3.1E-06 46.5 2.8 21 214-234 6-26 (166)
161 d1f6ba_ c.37.1.8 (A:) SAR1 {Ch 91.5 0.049 3.6E-06 46.6 3.3 25 210-234 12-36 (186)
162 d1xtqa1 c.37.1.8 (A:3-169) GTP 91.5 0.043 3.2E-06 46.5 2.8 23 212-234 5-27 (167)
163 d1oxxk2 c.37.1.12 (K:1-242) Gl 91.4 0.034 2.5E-06 50.2 2.1 22 212-233 32-53 (242)
164 d1mkya1 c.37.1.8 (A:2-172) Pro 91.4 0.05 3.6E-06 46.3 3.2 21 213-233 2-22 (171)
165 d2f9la1 c.37.1.8 (A:8-182) Rab 91.4 0.046 3.4E-06 46.7 2.9 22 213-234 6-27 (175)
166 d1nrjb_ c.37.1.8 (B:) Signal r 91.4 0.048 3.5E-06 47.9 3.2 23 212-234 4-26 (209)
167 d1um8a_ c.37.1.20 (A:) ClpX {H 91.3 0.054 4E-06 52.4 3.7 24 210-233 67-90 (364)
168 d2bmea1 c.37.1.8 (A:6-179) Rab 91.3 0.046 3.4E-06 46.7 2.8 22 213-234 7-28 (174)
169 d1kmqa_ c.37.1.8 (A:) RhoA {Hu 91.3 0.046 3.4E-06 46.8 2.8 22 213-234 4-25 (177)
170 d2qtvb1 c.37.1.8 (B:24-189) SA 91.2 0.051 3.7E-06 45.3 3.0 21 213-233 2-22 (166)
171 d1ji0a_ c.37.1.12 (A:) Branche 91.2 0.05 3.7E-06 49.3 3.1 22 212-233 33-54 (240)
172 d1ek0a_ c.37.1.8 (A:) Ypt51 {B 91.2 0.05 3.7E-06 46.2 2.9 22 213-234 5-26 (170)
173 d1wf3a1 c.37.1.8 (A:3-180) GTP 91.1 0.06 4.4E-06 46.1 3.4 24 211-234 5-28 (178)
174 d2fh5b1 c.37.1.8 (B:63-269) Si 91.1 0.053 3.9E-06 47.8 3.1 23 212-234 1-23 (207)
175 d1egaa1 c.37.1.8 (A:4-182) GTP 90.9 0.064 4.6E-06 45.8 3.4 24 211-234 5-28 (179)
176 d2g6ba1 c.37.1.8 (A:58-227) Ra 90.9 0.056 4.1E-06 45.9 3.0 22 213-234 8-29 (170)
177 d1mh1a_ c.37.1.8 (A:) Rac {Hum 90.9 0.064 4.7E-06 46.2 3.4 23 212-234 6-28 (183)
178 d1g6ha_ c.37.1.12 (A:) MJ1267 90.9 0.055 4E-06 49.5 3.1 22 212-233 31-52 (254)
179 d1svsa1 c.37.1.8 (A:32-60,A:18 90.9 0.058 4.2E-06 46.6 3.1 21 213-233 4-24 (195)
180 d1vpla_ c.37.1.12 (A:) Putativ 90.8 0.063 4.6E-06 48.5 3.3 23 211-233 28-50 (238)
181 d2atxa1 c.37.1.8 (A:9-193) Rho 90.8 0.055 4E-06 46.8 2.8 22 213-234 11-32 (185)
182 d1fzqa_ c.37.1.8 (A:) ADP-ribo 90.7 0.082 6E-06 45.0 3.9 22 212-233 17-38 (176)
183 d2bcgy1 c.37.1.8 (Y:3-196) GTP 90.7 0.056 4.1E-06 47.1 2.8 22 213-234 8-29 (194)
184 d2g3ya1 c.37.1.8 (A:73-244) GT 90.6 0.06 4.4E-06 45.9 2.8 21 213-233 5-25 (172)
185 d1zj6a1 c.37.1.8 (A:2-178) ADP 90.6 0.082 6E-06 44.9 3.8 23 212-234 16-38 (177)
186 d1vg8a_ c.37.1.8 (A:) Rab7 {Ra 90.5 0.063 4.6E-06 46.3 3.0 21 214-234 5-25 (184)
187 d1u8za_ c.37.1.8 (A:) Ras-rela 90.5 0.064 4.6E-06 45.5 2.9 23 212-234 5-27 (168)
188 d1zd9a1 c.37.1.8 (A:18-181) AD 90.4 0.065 4.7E-06 45.2 2.9 21 214-234 5-25 (164)
189 d2hyda1 c.37.1.12 (A:324-578) 90.4 0.043 3.1E-06 50.2 1.8 23 211-233 44-66 (255)
190 d2cxxa1 c.37.1.8 (A:2-185) GTP 90.4 0.062 4.5E-06 46.1 2.8 22 213-234 2-23 (184)
191 d1wmsa_ c.37.1.8 (A:) Rab9a {H 90.4 0.066 4.8E-06 45.6 2.9 22 213-234 8-29 (174)
192 d1htwa_ c.37.1.18 (A:) Hypothe 90.3 0.12 8.8E-06 43.1 4.4 26 210-235 32-57 (158)
193 d1udxa2 c.37.1.8 (A:157-336) O 90.3 0.048 3.5E-06 46.8 2.0 20 214-233 4-23 (180)
194 d1deka_ c.37.1.1 (A:) Deoxynuc 90.2 0.076 5.5E-06 47.9 3.4 22 212-233 2-23 (241)
195 d1x3sa1 c.37.1.8 (A:2-178) Rab 90.2 0.069 5E-06 45.7 2.9 21 214-234 10-30 (177)
196 d1m7ba_ c.37.1.8 (A:) RhoE (RN 90.2 0.067 4.9E-06 46.0 2.8 21 214-234 5-25 (179)
197 d1zcba2 c.37.1.8 (A:47-75,A:20 90.1 0.067 4.9E-06 46.5 2.8 19 213-231 4-22 (200)
198 d1i2ma_ c.37.1.8 (A:) Ran {Hum 90.0 0.045 3.3E-06 46.6 1.5 21 214-234 6-26 (170)
199 d1x1ra1 c.37.1.8 (A:10-178) Ra 90.0 0.075 5.4E-06 45.1 2.9 21 214-234 7-27 (169)
200 d2ngra_ c.37.1.8 (A:) CDC42 {H 89.8 0.074 5.4E-06 46.1 2.8 22 213-234 5-26 (191)
201 d1l7vc_ c.37.1.12 (C:) ABC tra 89.8 0.063 4.6E-06 48.3 2.3 22 212-233 26-47 (231)
202 d1g3qa_ c.37.1.10 (A:) Cell di 89.7 0.21 1.5E-05 44.5 6.1 37 212-250 3-40 (237)
203 d2gj8a1 c.37.1.8 (A:216-376) P 89.7 0.079 5.8E-06 44.3 2.9 21 213-233 3-23 (161)
204 d1e0sa_ c.37.1.8 (A:) ADP-ribo 89.7 0.055 4E-06 46.1 1.8 24 210-234 12-35 (173)
205 d1lnza2 c.37.1.8 (A:158-342) O 89.7 0.061 4.4E-06 46.3 2.1 21 213-233 3-23 (185)
206 d1tf7a1 c.37.1.11 (A:14-255) C 89.6 0.13 9.1E-06 45.9 4.4 40 210-250 25-64 (242)
207 d2bcjq2 c.37.1.8 (Q:38-66,Q:18 89.6 0.082 6E-06 45.8 2.9 21 213-233 4-24 (200)
208 d2bmja1 c.37.1.8 (A:66-240) Ce 89.4 0.089 6.5E-06 45.0 3.0 22 213-234 7-28 (175)
209 d1moza_ c.37.1.8 (A:) ADP-ribo 89.1 0.068 4.9E-06 45.9 2.0 22 212-233 18-39 (182)
210 d1mkya2 c.37.1.8 (A:173-358) P 88.8 0.1 7.4E-06 44.8 3.0 22 213-234 10-31 (186)
211 d1kkma_ c.91.1.2 (A:) HPr kina 88.8 0.13 9.3E-06 43.9 3.4 22 212-233 15-36 (176)
212 d2fu5c1 c.37.1.8 (C:3-175) Rab 88.6 0.065 4.8E-06 45.6 1.5 22 213-234 8-29 (173)
213 d1puia_ c.37.1.8 (A:) Probable 88.6 0.082 6E-06 45.2 2.2 25 209-233 14-38 (188)
214 d1knxa2 c.91.1.2 (A:133-309) H 88.2 0.14 1E-05 43.6 3.4 22 212-233 16-37 (177)
215 d1byia_ c.37.1.10 (A:) Dethiob 88.1 0.15 1.1E-05 44.8 3.7 24 212-235 2-26 (224)
216 d1nlfa_ c.37.1.11 (A:) Hexamer 87.9 0.13 9.5E-06 47.2 3.3 23 212-234 30-52 (274)
217 d1ko7a2 c.91.1.2 (A:130-298) H 87.8 0.13 9.8E-06 43.4 2.9 22 212-233 16-37 (169)
218 d1azta2 c.37.1.8 (A:35-65,A:20 87.7 0.12 8.9E-06 45.9 2.8 22 212-233 7-28 (221)
219 d1p9ra_ c.37.1.11 (A:) Extrace 87.7 0.91 6.6E-05 44.0 9.6 96 187-302 140-238 (401)
220 d1h65a_ c.37.1.8 (A:) Chloropl 86.6 0.3 2.2E-05 44.4 4.9 40 191-234 16-55 (257)
221 d1xzpa2 c.37.1.8 (A:212-371) T 86.5 0.071 5.1E-06 44.6 0.4 21 214-234 3-23 (160)
222 d1tuea_ c.37.1.20 (A:) Replica 86.0 0.32 2.3E-05 42.0 4.4 37 192-233 39-75 (205)
223 g1f2t.1 c.37.1.12 (A:,B:) Rad5 85.6 0.23 1.6E-05 45.7 3.6 22 212-233 24-45 (292)
224 d1g6oa_ c.37.1.11 (A:) Hexamer 85.2 0.23 1.7E-05 46.9 3.4 21 213-233 168-188 (323)
225 d2bv3a2 c.37.1.8 (A:7-282) Elo 84.8 0.21 1.6E-05 45.8 2.9 25 209-233 4-28 (276)
226 d1t9ha2 c.37.1.8 (A:68-298) Pr 83.9 0.14 1E-05 45.6 1.1 21 213-233 99-119 (231)
227 d2dy1a2 c.37.1.8 (A:8-274) Elo 83.2 0.31 2.3E-05 44.5 3.3 22 211-232 2-23 (267)
228 d2fz4a1 c.37.1.19 (A:24-229) D 82.7 5 0.00036 34.3 11.3 111 185-315 68-193 (206)
229 d1p6xa_ c.37.1.1 (A:) Thymidin 81.9 0.37 2.7E-05 45.5 3.3 24 211-234 6-29 (333)
230 d1u0ja_ c.37.1.20 (A:) Rep 40 81.5 0.74 5.4E-05 41.9 5.2 35 195-233 92-126 (267)
231 d1g7sa4 c.37.1.8 (A:1-227) Ini 81.3 0.4 2.9E-05 42.6 3.2 23 212-234 6-28 (227)
232 d1pjra1 c.37.1.19 (A:1-318) DE 81.2 0.68 5E-05 43.1 5.0 15 214-228 27-41 (318)
233 d1uaaa1 c.37.1.19 (A:2-307) DE 81.1 0.67 4.9E-05 42.7 4.9 16 213-228 16-31 (306)
234 d1e2ka_ c.37.1.1 (A:) Thymidin 80.9 0.34 2.5E-05 45.6 2.6 23 211-233 4-26 (329)
235 g1ii8.1 c.37.1.12 (A:,B:) Rad5 80.3 0.48 3.5E-05 44.4 3.6 22 212-233 24-45 (369)
236 d1f5na2 c.37.1.8 (A:7-283) Int 80.0 0.76 5.5E-05 42.1 4.7 25 209-233 30-54 (277)
237 d1wb1a4 c.37.1.8 (A:1-179) Elo 79.1 0.46 3.4E-05 40.3 2.7 21 213-233 7-27 (179)
238 d1qhla_ c.37.1.12 (A:) Cell di 77.9 0.24 1.7E-05 42.7 0.4 21 213-233 26-46 (222)
239 d1osna_ c.37.1.1 (A:) Thymidin 77.6 0.47 3.4E-05 44.7 2.5 23 212-234 6-28 (331)
240 g1xew.1 c.37.1.12 (X:,Y:) Smc 77.2 0.52 3.8E-05 44.1 2.7 22 212-233 27-48 (329)
241 d1jala1 c.37.1.8 (A:1-278) Ych 76.7 0.62 4.5E-05 42.7 3.0 22 213-234 4-25 (278)
242 d1n0ua2 c.37.1.8 (A:3-343) Elo 76.7 0.77 5.6E-05 43.3 3.7 35 194-233 5-39 (341)
243 d1wxqa1 c.37.1.8 (A:1-319) GTP 72.3 0.84 6.1E-05 42.6 2.8 29 214-242 3-31 (319)
244 d2c78a3 c.37.1.8 (A:9-212) Elo 72.3 0.97 7.1E-05 39.2 3.0 21 213-233 5-25 (204)
245 d1tq4a_ c.37.1.8 (A:) Interfer 72.3 0.85 6.2E-05 44.2 2.8 22 212-233 57-78 (400)
246 d1ni3a1 c.37.1.8 (A:11-306) Yc 70.2 1.1 8.3E-05 41.2 3.1 22 213-234 12-33 (296)
247 d1puja_ c.37.1.8 (A:) Probable 69.4 2.6 0.00019 38.1 5.4 24 210-233 111-134 (273)
248 d1g8fa3 c.37.1.15 (A:390-511) 68.4 1.4 0.0001 34.3 2.8 22 212-233 7-28 (122)
249 d1e69a_ c.37.1.12 (A:) Smc hea 67.8 1.1 7.9E-05 41.3 2.4 22 212-233 25-46 (308)
250 d1w1wa_ c.37.1.12 (A:) Smc hea 64.7 1.7 0.00013 41.7 3.4 22 212-233 26-47 (427)
251 d1wb9a2 c.37.1.12 (A:567-800) 61.0 2.6 0.00019 37.1 3.5 24 211-234 41-64 (234)
252 d1g5ta_ c.37.1.11 (A:) ATP:cor 60.4 5.2 0.00038 32.6 5.0 47 285-331 87-137 (157)
253 d1yksa1 c.37.1.14 (A:185-324) 60.3 2.6 0.00019 33.0 3.1 18 212-229 8-25 (140)
254 d2olra1 c.91.1.1 (A:228-540) P 59.7 2.1 0.00015 39.4 2.5 17 212-228 15-31 (313)
255 d1j3ba1 c.91.1.1 (A:212-529) P 58.8 2.3 0.00017 39.2 2.7 17 212-228 15-31 (318)
256 d2akab1 c.37.1.8 (B:6-304) Dyn 58.2 5.6 0.0004 36.1 5.5 26 209-234 24-49 (299)
257 d1p3da1 c.5.1.1 (A:11-106) UDP 57.2 4.1 0.0003 30.2 3.5 24 210-233 7-30 (96)
258 d1e9ra_ c.37.1.11 (A:) Bacteri 56.4 2.6 0.00019 40.8 2.9 22 212-233 51-72 (433)
259 d1d2ea3 c.37.1.8 (A:55-250) El 56.2 2.9 0.00021 35.7 2.8 21 213-233 5-25 (196)
260 d1ii2a1 c.91.1.1 (A:201-523) P 55.7 2.6 0.00019 38.8 2.5 17 212-228 15-31 (323)
261 d2eyqa3 c.37.1.19 (A:546-778) 55.2 27 0.002 30.1 9.3 39 189-233 60-98 (233)
262 d2p6ra3 c.37.1.19 (A:1-202) He 55.2 5.9 0.00043 33.5 4.8 17 213-229 42-58 (202)
263 d2bmfa2 c.37.1.14 (A:178-482) 53.3 12 0.00091 33.4 7.2 51 211-268 9-60 (305)
264 d1kk1a3 c.37.1.8 (A:6-200) Ini 51.0 3.9 0.00028 34.6 2.8 20 213-232 7-26 (195)
265 d1jnya3 c.37.1.8 (A:4-227) Elo 50.3 4.1 0.0003 35.4 2.9 21 213-233 5-25 (224)
266 d1hv8a1 c.37.1.19 (A:3-210) Pu 49.0 16 0.0012 30.9 6.7 19 213-231 44-62 (208)
267 g1qhh.1 c.37.1.19 (A:,B:,C:,D: 47.2 3.5 0.00026 41.8 2.2 15 214-228 27-41 (623)
268 d1zunb3 c.37.1.8 (B:16-237) Su 46.6 6.1 0.00044 34.3 3.4 23 211-233 9-31 (222)
269 d2qn6a3 c.37.1.8 (A:2-206) Ini 46.1 5.1 0.00037 34.1 2.8 21 213-233 10-30 (205)
270 d1ewqa2 c.37.1.12 (A:542-765) 45.4 5.9 0.00043 34.5 3.1 23 212-234 36-58 (224)
271 d1jwyb_ c.37.1.8 (B:) Dynamin 44.6 11 0.00081 34.1 5.2 25 210-234 23-47 (306)
272 d1wp9a1 c.37.1.19 (A:1-200) pu 43.7 9.2 0.00067 31.9 4.2 19 214-232 26-44 (200)
273 d1w36b1 c.37.1.19 (B:1-485) Ex 43.5 4.8 0.00035 39.1 2.5 22 211-232 16-38 (485)
274 d1r0ka2 c.2.1.3 (A:3-126,A:265 43.2 16 0.0011 29.3 5.2 32 211-246 2-34 (150)
275 d1j6ua1 c.5.1.1 (A:0-88) UDP-N 42.8 6.6 0.00048 28.5 2.5 20 214-233 4-23 (89)
276 d1lkxa_ c.37.1.9 (A:) Myosin S 41.1 8 0.00058 39.8 3.8 26 210-235 85-110 (684)
277 d1r5ba3 c.37.1.8 (A:215-459) E 40.7 5.9 0.00043 35.0 2.4 21 213-233 26-46 (245)
278 d1c9ka_ c.37.1.11 (A:) Adenosy 40.6 13 0.00092 30.9 4.4 35 213-253 1-35 (180)
279 d1d0xa2 c.37.1.9 (A:2-33,A:80- 39.9 8.5 0.00062 39.7 3.8 26 210-235 124-149 (712)
280 d1gm5a3 c.37.1.19 (A:286-549) 39.7 53 0.0039 28.7 8.9 38 190-233 89-126 (264)
281 d1f60a3 c.37.1.8 (A:2-240) Elo 39.1 7.7 0.00056 34.0 2.9 21 213-233 8-28 (239)
282 d1gkub1 c.37.1.16 (B:1-250) He 39.0 24 0.0017 30.2 6.4 18 213-230 60-77 (237)
283 d1br2a2 c.37.1.9 (A:80-789) My 38.4 9.2 0.00067 39.5 3.8 26 210-235 90-115 (710)
284 d2a5yb1 a.4.5.80 (B:386-543) C 38.1 32 0.0024 25.3 5.7 81 438-522 2-84 (158)
285 d2mysa2 c.37.1.9 (A:4-33,A:80- 35.7 10 0.00075 39.6 3.6 26 210-235 122-147 (794)
286 d1kk8a2 c.37.1.9 (A:1-28,A:77- 34.2 11 0.00081 39.4 3.6 26 210-235 120-145 (789)
287 d1w5fa1 c.32.1.1 (A:22-215) Ce 33.0 78 0.0057 26.1 8.4 88 186-299 65-155 (194)
288 d1w7ja2 c.37.1.9 (A:63-792) My 32.6 13 0.00094 38.5 3.8 25 210-234 93-117 (730)
289 d1p6qa_ c.23.1.1 (A:) CheY pro 27.7 1.1E+02 0.0083 22.7 8.8 105 250-359 13-123 (129)
290 d1t5la1 c.37.1.19 (A:2-414) Nu 26.8 35 0.0025 32.2 5.5 61 193-266 20-80 (413)
291 d1u0sy_ c.23.1.1 (Y:) CheY pro 26.5 28 0.002 26.1 4.0 105 250-359 8-116 (118)
292 d2vapa1 c.32.1.1 (A:23-231) Ce 24.3 1.8E+02 0.013 24.0 9.4 89 186-300 80-171 (209)
293 d1c4oa1 c.37.1.19 (A:2-409) Nu 24.2 47 0.0035 31.2 6.0 62 192-266 16-77 (408)
294 d2jfga1 c.5.1.1 (A:1-93) UDP-N 23.8 15 0.0011 26.4 1.7 20 213-233 7-26 (93)
295 d2a9pa1 c.23.1.1 (A:2-118) DNA 23.2 78 0.0057 23.3 6.1 102 250-357 7-111 (117)
296 d1e8ca3 c.72.2.1 (A:104-337) U 21.8 22 0.0016 30.1 2.7 24 209-234 3-26 (234)
297 d1oywa2 c.37.1.19 (A:1-206) Re 21.5 27 0.002 29.0 3.2 16 214-229 43-58 (206)
298 d2gc6a2 c.72.2.2 (A:1-296) Fol 20.6 30 0.0022 30.9 3.5 35 193-233 25-59 (296)
299 d1o5za2 c.72.2.2 (A:-2-293) Fo 20.5 37 0.0027 30.2 4.2 36 193-234 29-64 (296)
No 1
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]}
Probab=100.00 E-value=2e-39 Score=320.35 Aligned_cols=247 Identities=16% Similarity=0.148 Sum_probs=194.4
Q ss_pred CCccccccchHHHHHHHHhcCCCCCCCCceEEEEEccCCChHHHHHHHHhhhhh--hhccCCceEEEEeCCCCCHHHHHH
Q 039283 183 EDEVYGREKDKEAIVELLLRDDLRADDGFSVVSIKGLGGVGKTTLAQLVNKDDR--VQRHFQIKAWTCVSEDFDVFTVSK 260 (600)
Q Consensus 183 ~~~~vGR~~e~~~l~~~L~~~~~~~~~~~~vv~I~G~~GiGKTtLA~~v~~~~~--~~~~F~~~~wv~vs~~~~~~~~l~ 260 (600)
.+.+|||+.++++|+++|.... +.+.++|+|+||||+||||||+++|++.. ...+|++++|+++++.++...+..
T Consensus 19 ~~~~~gR~~~~~~i~~~L~~~~---~~~~~~v~I~GmgGiGKTtLA~~v~~~~~~~~~~~f~~~~Wv~vs~~~~~~~l~~ 95 (277)
T d2a5yb3 19 QMTCYIREYHVDRVIKKLDEMC---DLDSFFLFLHGRAGSGKSVIASQALSKSDQLIGINYDSIVWLKDSGTAPKSTFDL 95 (277)
T ss_dssp CCCSCCCHHHHHHHHHHHHHHT---TSSSEEEEEECSTTSSHHHHHHHHHHHCSSTBTTTBSEEEEEECCCCSTTHHHHH
T ss_pred CCceeCcHHHHHHHHHHHHhcc---CCCceEEEEECCCCCCHHHHHHHHHHhhhhhhhhcCceEEEEEecCCCCHHHHHH
Confidence 4458899999999999997532 35678999999999999999999998643 667899999999999988777766
Q ss_pred HHHHHhh---cCCC------CCcccHHHHHHHHHHHhCCCcEEEEEecCCCCChhhHHhhcCCCCCCCCCcEEEEeccCh
Q 039283 261 SILNSIA---SDQC------TDKDDLNLLQEKLKKQLSGKKFLLVLDDVWNENYNSWRALSCPFGAGASGSKIVVTHRNQ 331 (600)
Q Consensus 261 ~il~~l~---~~~~------~~~~~~~~l~~~l~~~L~~k~~LlVlDdv~~~~~~~~~~l~~~l~~~~~gs~IlvTtR~~ 331 (600)
.+...+. .... ............+...+.++++|+||||+|+.. .|..+. ..||+||||||+.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~kr~LlVLDDv~~~~--~~~~~~------~~~srilvTTR~~ 167 (277)
T d2a5yb3 96 FTDILLMLKSEDDLLNFPSVEHVTSVVLKRMICNALIDRPNTLFVFDDVVQEE--TIRWAQ------ELRLRCLVTTRDV 167 (277)
T ss_dssp HHHHHHHHTTTSCCTTCCCCTTCCHHHHHHHHHHHHTTSTTEEEEEEEECCHH--HHHHHH------HTTCEEEEEESBG
T ss_pred HHHHHHHHhcchhhcCCccchhhhhHHHHHHHHHHHhccCCeeEecchhhHHh--hhhhhc------ccCceEEEEeehH
Confidence 6654432 2111 022334445556888899999999999999763 444332 2479999999999
Q ss_pred HHHhhcCcc-ceeecCCCCHHHHHHHHHHhhcCCCCCCCChhHHHHHHHHHHhhcCchhHHHHHHhhhcCCCChhHHHHH
Q 039283 332 GVAETMRAV-STKTLKELSDDDCLRVLIQHSLGARDFNIPQSLKEVAEKIVKKCKGLPLAAKTLGGLLRGKDDLNDWEIV 410 (600)
Q Consensus 332 ~v~~~~~~~-~~~~l~~L~~~ea~~Lf~~~a~~~~~~~~~~~l~~~~~~I~~~~~GlPLai~~~~~~L~~~~~~~~w~~~ 410 (600)
.++..+... +.|+|++|+.+||++||.++++... ..+..++++++|+++|+|+||||+++|+.|+.+ +.+.|...
T Consensus 168 ~v~~~~~~~~~~~~l~~L~~~ea~~Lf~~~~~~~~---~~~~~~~~~~~iv~~c~GlPLAl~~ig~~l~~k-~~~~~~~~ 243 (277)
T d2a5yb3 168 EISNAASQTCEFIEVTSLEIDECYDFLEAYGMPMP---VGEKEEDVLNKTIELSSGNPATLMMFFKSCEPK-TFEKMAQL 243 (277)
T ss_dssp GGGGGCCSCEEEEECCCCCHHHHHHHHHHTSCCCC-----CHHHHHHHHHHHHHTTCHHHHHHHHTTCCSS-SHHHHHHH
T ss_pred HHHHhcCCCCceEECCCCCHHHHHHHHHHHhCCcc---CchhhHHHHHHHHHHhCCCHHHHHHHHHHhccC-CHHHHHHH
Confidence 998876543 7899999999999999999887643 345567889999999999999999999999876 57788876
Q ss_pred HHhccccccCCCccchHHHHHhhhCCChhHHHHHHHh
Q 039283 411 LNANIWDLQEDKCDIIPALRVSYHFLPPQLKQCFAYI 447 (600)
Q Consensus 411 l~~~~~~~~~~~~~i~~~l~~sy~~L~~~~k~~f~~l 447 (600)
.+.+... ...++..++.+||++||+++|.||.++
T Consensus 244 ~~~L~~~---~~~~v~~il~~sY~~L~~~lk~c~~~l 277 (277)
T d2a5yb3 244 NNKLESR---GLVGVECITPYSYKSLAMALQRCVEVL 277 (277)
T ss_dssp HHHHHHH---CSSTTCCCSSSSSSSHHHHHHHHHHTS
T ss_pred HHHHhcC---cHHHHHHHHHHHHhcccHHHHHHHHhC
Confidence 6654322 235688899999999999999999864
No 2
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=99.25 E-value=1.2e-11 Score=120.03 Aligned_cols=197 Identities=19% Similarity=0.208 Sum_probs=112.6
Q ss_pred CCCccccccchHHHHHHHHhcCCCCCCCCceEEEEEccCCChHHHHHHHHhhhhhhhccCCceEEEEeC-----CCCCHH
Q 039283 182 NEDEVYGREKDKEAIVELLLRDDLRADDGFSVVSIKGLGGVGKTTLAQLVNKDDRVQRHFQIKAWTCVS-----EDFDVF 256 (600)
Q Consensus 182 ~~~~~vGR~~e~~~l~~~L~~~~~~~~~~~~vv~I~G~~GiGKTtLA~~v~~~~~~~~~F~~~~wv~vs-----~~~~~~ 256 (600)
....||||++++++|.+.. .+++.|+|++|+|||+|++++.... .. ...|+++. ......
T Consensus 10 ~~~~f~GR~~el~~l~~~~----------~~~i~i~G~~G~GKTsLl~~~~~~~--~~---~~~~i~~~~~~~~~~~~~~ 74 (283)
T d2fnaa2 10 NRKDFFDREKEIEKLKGLR----------APITLVLGLRRTGKSSIIKIGINEL--NL---PYIYLDLRKFEERNYISYK 74 (283)
T ss_dssp SGGGSCCCHHHHHHHHHTC----------SSEEEEEESTTSSHHHHHHHHHHHH--TC---CEEEEEGGGGTTCSCCCHH
T ss_pred ChhhCCChHHHHHHHHhcc----------CCEEEEEcCCCCcHHHHHHHHHHHC--CC---CeEEEEeccccccccccHH
Confidence 3567999999999987631 2588999999999999999887632 22 23455542 122234
Q ss_pred HHHHHHHHHhhcC----------------------------CCCCcccHHHHHHHHHHHhCCCcEEEEEecCCCCC----
Q 039283 257 TVSKSILNSIASD----------------------------QCTDKDDLNLLQEKLKKQLSGKKFLLVLDDVWNEN---- 304 (600)
Q Consensus 257 ~~l~~il~~l~~~----------------------------~~~~~~~~~~l~~~l~~~L~~k~~LlVlDdv~~~~---- 304 (600)
.+...+....... ......+...+...+. ...++++++|+|++....
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~~~~~~~~i~id~~~~~~~~~~ 153 (283)
T d2fnaa2 75 DFLLELQKEINKLVKRLPSLLKALKNIQGIVIMGNEIKFNWNRKDRLSFANLLESFE-QASKDNVIIVLDEAQELVKLRG 153 (283)
T ss_dssp HHHHHHHHHHHHHHHHCTTHHHHTTTSTTEEECSSSEEEC-----CCCHHHHHHHHH-HTCSSCEEEEEETGGGGGGCTT
T ss_pred HHHHHHHHHhhhhhhhhHHHHHHHHhhhcccccccccccccchhhhhHHHHHHHHHH-hhcccccccccchhhhhcccch
Confidence 4444433322110 0001222333333332 235789999999983211
Q ss_pred hhhHHhhcCCCCCCCCCcEEEEeccChHHHhhcC------------ccceeecCCCCHHHHHHHHHHhhcCCCCCCCChh
Q 039283 305 YNSWRALSCPFGAGASGSKIVVTHRNQGVAETMR------------AVSTKTLKELSDDDCLRVLIQHSLGARDFNIPQS 372 (600)
Q Consensus 305 ~~~~~~l~~~l~~~~~gs~IlvTtR~~~v~~~~~------------~~~~~~l~~L~~~ea~~Lf~~~a~~~~~~~~~~~ 372 (600)
...+..+.... ........+++.+......... ....+.|.+++.+++.+++.+....... .. +
T Consensus 154 ~~~~~~l~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~l~~~e~~~~l~~~~~~~~~-~~-~- 229 (283)
T d2fnaa2 154 VNLLPALAYAY-DNLKRIKFIMSGSEMGLLYDYLRVEDPESPLFGRAFSTVELKPFSREEAIEFLRRGFQEADI-DF-K- 229 (283)
T ss_dssp CCCHHHHHHHH-HHCTTEEEEEEESSHHHHHHHTTTTCTTSTTTTCCCEEEEECCCCHHHHHHHHHHHHHHHTC-CC-C-
T ss_pred HHHHHHHHHHH-HhhhhhhhhhccccchHHHHHHHhhhhcchhcccceeEEeeCCCCHHHHHHHHHhhhhhcCC-CH-H-
Confidence 01111111111 1123445555555443221110 1356889999999999999776432111 11 1
Q ss_pred HHHHHHHHHHhhcCchhHHHHHHhhhcCC
Q 039283 373 LKEVAEKIVKKCKGLPLAAKTLGGLLRGK 401 (600)
Q Consensus 373 l~~~~~~I~~~~~GlPLai~~~~~~L~~~ 401 (600)
...+|++.++|+|..+..++..+...
T Consensus 230 ---~~~~i~~~~~G~P~~L~~~~~~~~~~ 255 (283)
T d2fnaa2 230 ---DYEVVYEKIGGIPGWLTYFGFIYLDN 255 (283)
T ss_dssp ---CHHHHHHHHCSCHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHhCCCHHHHHHHHHHHHhc
Confidence 25689999999999999998766544
No 3
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=99.04 E-value=6.8e-09 Score=99.68 Aligned_cols=177 Identities=15% Similarity=0.090 Sum_probs=115.0
Q ss_pred CCccccccchHHHHHHHHhcCCCCCCCCceEEEEEccCCChHHHHHHHHhhhhhhhccCC-ceEEEEeCCCCCHHHHHHH
Q 039283 183 EDEVYGREKDKEAIVELLLRDDLRADDGFSVVSIKGLGGVGKTTLAQLVNKDDRVQRHFQ-IKAWTCVSEDFDVFTVSKS 261 (600)
Q Consensus 183 ~~~~vGR~~e~~~l~~~L~~~~~~~~~~~~vv~I~G~~GiGKTtLA~~v~~~~~~~~~F~-~~~wv~vs~~~~~~~~l~~ 261 (600)
+..++||+.++++|.++|...-.......+.+.|+|++|+|||++|+.+++... .... ..+|+...........+..
T Consensus 15 p~~l~~Re~ei~~l~~~l~~~l~~~~~~~~~lll~GppGtGKT~l~~~l~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~ 92 (276)
T d1fnna2 15 PKRLPHREQQLQQLDILLGNWLRNPGHHYPRATLLGRPGTGKTVTLRKLWELYK--DKTTARFVYINGFIYRNFTAIIGE 92 (276)
T ss_dssp CSCCTTCHHHHHHHHHHHHHHHHSTTSSCCEEEEECCTTSSHHHHHHHHHHHHT--TSCCCEEEEEETTTCCSHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhCCCCCCCceEEECCCCCCHHHHHHHHHHHHh--cccCCcEEEecchhhhhhhhhhhh
Confidence 345899999999999998642100124567899999999999999999987542 2222 3457777777888888888
Q ss_pred HHHHhhcCCCCCcccHHHHHHHHHHHhC--CCcEEEEEecCCCCChhhHHhhcCCCC---C-CCCCcEEEEeccChHHHh
Q 039283 262 ILNSIASDQCTDKDDLNLLQEKLKKQLS--GKKFLLVLDDVWNENYNSWRALSCPFG---A-GASGSKIVVTHRNQGVAE 335 (600)
Q Consensus 262 il~~l~~~~~~~~~~~~~l~~~l~~~L~--~k~~LlVlDdv~~~~~~~~~~l~~~l~---~-~~~gs~IlvTtR~~~v~~ 335 (600)
+....+............+...+...+. ....++++|+++.............+. . ......+|.++.......
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 172 (276)
T d1fnna2 93 IARSLNIPFPRRGLSRDEFLALLVEHLRERDLYMFLVLDDAFNLAPDILSTFIRLGQEADKLGAFRIALVIVGHNDAVLN 172 (276)
T ss_dssp HHHHTTCCCCSSCCCHHHHHHHHHHHHHHTTCCEEEEEETGGGSCHHHHHHHHHHTTCHHHHSSCCEEEEEEESSTHHHH
T ss_pred hHHhhhhhhhhhccchhHHHHHHHHHHhhcccccccchhHHHHhhhhhhhhHHHHHhccccccccceEEeecCCchhhhh
Confidence 8888876654445555566565555543 456778888886654433333222111 1 122344555555443322
Q ss_pred hcC-------ccceeecCCCCHHHHHHHHHHhh
Q 039283 336 TMR-------AVSTKTLKELSDDDCLRVLIQHS 361 (600)
Q Consensus 336 ~~~-------~~~~~~l~~L~~~ea~~Lf~~~a 361 (600)
... ....+.+.+.+.++..+++.+.+
T Consensus 173 ~~~~~~~~r~~~~~i~~~~~~~~e~~~il~~r~ 205 (276)
T d1fnna2 173 NLDPSTRGIMGKYVIRFSPYTKDQIFDILLDRA 205 (276)
T ss_dssp TSCHHHHHHHTTCEEECCCCBHHHHHHHHHHHH
T ss_pred hcchhhhhhhcchhccccchhHHHHHHHHHHHH
Confidence 211 22457899999999999998764
No 4
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.85 E-value=1.1e-08 Score=95.50 Aligned_cols=180 Identities=13% Similarity=0.133 Sum_probs=110.2
Q ss_pred CccccccchHHHHHHHHhcCCCCCCCCceEEEEEccCCChHHHHHHHHhhhhhhhccCCceEEEEeCCCCCHHHHHHHHH
Q 039283 184 DEVYGREKDKEAIVELLLRDDLRADDGFSVVSIKGLGGVGKTTLAQLVNKDDRVQRHFQIKAWTCVSEDFDVFTVSKSIL 263 (600)
Q Consensus 184 ~~~vGR~~e~~~l~~~L~~~~~~~~~~~~vv~I~G~~GiGKTtLA~~v~~~~~~~~~F~~~~wv~vs~~~~~~~~l~~il 263 (600)
.+++|.++.++.|..|+... ..+.+.++|++|+||||+|+.+++............=.+.+...+.........
T Consensus 14 ~divg~~~~~~~L~~~i~~~------~~~~lLl~Gp~G~GKttl~~~la~~l~~~~~~~~~~e~~~~~~~~~~~~~~~~~ 87 (227)
T d1sxjc2 14 DEVYGQNEVITTVRKFVDEG------KLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIK 87 (227)
T ss_dssp GGCCSCHHHHHHHHHHHHTT------CCCCEEEECSSSSSHHHHHHHHHHHHHTTSHHHHEEEECTTSCCSHHHHHTHHH
T ss_pred HHccCcHHHHHHHHHHHHcC------CCCeEEEECCCCCChhHHHHHHHHHhhcCCCcceeEEecccccCCeeeeecchh
Confidence 35999999999999999654 334577999999999999999987432111111112222222222221111111
Q ss_pred HHhhcCCCCCcccHHHHHHHHHHHhCCCcEEEEEecCCCCChhhHHhhcCCCCCCCCCcEEEEeccChH-HH-hhcCccc
Q 039283 264 NSIASDQCTDKDDLNLLQEKLKKQLSGKKFLLVLDDVWNENYNSWRALSCPFGAGASGSKIVVTHRNQG-VA-ETMRAVS 341 (600)
Q Consensus 264 ~~l~~~~~~~~~~~~~l~~~l~~~L~~k~~LlVlDdv~~~~~~~~~~l~~~l~~~~~gs~IlvTtR~~~-v~-~~~~~~~ 341 (600)
...... ....++.-++|+|++..........+...+......+.++++|.... +. .......
T Consensus 88 ~~~~~~----------------~~~~~~~kiiiiDe~d~~~~~~~~~Ll~~le~~~~~~~~~~~~~~~~~i~~~i~sr~~ 151 (227)
T d1sxjc2 88 DFASTR----------------QIFSKGFKLIILDEADAMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTPALLSQCT 151 (227)
T ss_dssp HHHHBC----------------CSSSCSCEEEEETTGGGSCHHHHHHHHHHHHHTTTTEEEEEEESCGGGSCHHHHTTSE
T ss_pred hccccc----------------cccCCCeEEEEEeccccchhhHHHHHHHHhhhcccceeeccccCcHHHhHHHHHHHHh
Confidence 111100 01123456899999987766665666655555556778888877542 11 1223456
Q ss_pred eeecCCCCHHHHHHHHHHhhcCCCCCCCChhHHHHHHHHHHhhcCchh
Q 039283 342 TKTLKELSDDDCLRVLIQHSLGARDFNIPQSLKEVAEKIVKKCKGLPL 389 (600)
Q Consensus 342 ~~~l~~L~~~ea~~Lf~~~a~~~~~~~~~~~l~~~~~~I~~~~~GlPL 389 (600)
.+.+.+++.++-..++.+.+..... ..+ .+....|++.++|..-
T Consensus 152 ~i~~~~~~~~~i~~~l~~I~~~e~i-~i~---~~~l~~i~~~s~Gd~R 195 (227)
T d1sxjc2 152 RFRFQPLPQEAIERRIANVLVHEKL-KLS---PNAEKALIELSNGDMR 195 (227)
T ss_dssp EEECCCCCHHHHHHHHHHHHHTTTC-CBC---HHHHHHHHHHHTTCHH
T ss_pred hhccccccccccccccccccccccc-cCC---HHHHHHHHHHcCCcHH
Confidence 8899999999999999877644322 222 2567889999999763
No 5
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.84 E-value=1.2e-08 Score=95.27 Aligned_cols=183 Identities=16% Similarity=0.157 Sum_probs=113.1
Q ss_pred CccccccchHHHHHHHHhcCCCCCCCCceEEEEEccCCChHHHHHHHHhhhhhhhccCCceEEEEeCCCCCHHHHHHHHH
Q 039283 184 DEVYGREKDKEAIVELLLRDDLRADDGFSVVSIKGLGGVGKTTLAQLVNKDDRVQRHFQIKAWTCVSEDFDVFTVSKSIL 263 (600)
Q Consensus 184 ~~~vGR~~e~~~l~~~L~~~~~~~~~~~~vv~I~G~~GiGKTtLA~~v~~~~~~~~~F~~~~wv~vs~~~~~~~~l~~il 263 (600)
.+++|.+..++.|.+|+... ..+.+.++|++|+||||+|+.+.+.......-....-++.+.......+...+.
T Consensus 15 ~d~ig~~~~~~~L~~~~~~~------~~~~~ll~Gp~G~GKTt~a~~la~~l~~~~~~~~~~~~n~~~~~~~~~i~~~~~ 88 (224)
T d1sxjb2 15 SDIVGNKETIDRLQQIAKDG------NMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGIDVVRNQIK 88 (224)
T ss_dssp GGCCSCTHHHHHHHHHHHSC------CCCCEEEECSTTSSHHHHHHHHHHHHHGGGHHHHEEEECTTSCCSHHHHHTHHH
T ss_pred HHhcCCHHHHHHHHHHHHcC------CCCeEEEECCCCCCchhhHHHHHHHHhccccccccccccccccCCceehhhHHH
Confidence 45899999999999999654 344578999999999999998876432211111223334444333333322222
Q ss_pred HHhhcCCCCCcccHHHHHHHHHHHhCCCcEEEEEecCCCCChhhHHhhcCCCCCCCCCcEEEEeccChH-HH-hhcCccc
Q 039283 264 NSIASDQCTDKDDLNLLQEKLKKQLSGKKFLLVLDDVWNENYNSWRALSCPFGAGASGSKIVVTHRNQG-VA-ETMRAVS 341 (600)
Q Consensus 264 ~~l~~~~~~~~~~~~~l~~~l~~~L~~k~~LlVlDdv~~~~~~~~~~l~~~l~~~~~gs~IlvTtR~~~-v~-~~~~~~~ 341 (600)
........ ...++.-++|+|+++.........++..+......++++++|.+.. +. .......
T Consensus 89 ~~~~~~~~---------------~~~~~~kviiiDe~d~~~~~~~~~ll~~~e~~~~~~~~i~~~~~~~~i~~~l~sr~~ 153 (224)
T d1sxjb2 89 HFAQKKLH---------------LPPGKHKIVILDEADSMTAGAQQALRRTMELYSNSTRFAFACNQSNKIIEPLQSQCA 153 (224)
T ss_dssp HHHHBCCC---------------CCTTCCEEEEEESGGGSCHHHHHTTHHHHHHTTTTEEEEEEESCGGGSCHHHHTTSE
T ss_pred HHHHhhcc---------------CCCcceEEEEEecccccchhHHHHHhhhccccccceeeeeccCchhhhhhHHHHHHH
Confidence 22211110 0123566899999987766665555555544455667777766542 21 1223456
Q ss_pred eeecCCCCHHHHHHHHHHhhcCCCCCCCChhHHHHHHHHHHhhcCchhHH
Q 039283 342 TKTLKELSDDDCLRVLIQHSLGARDFNIPQSLKEVAEKIVKKCKGLPLAA 391 (600)
Q Consensus 342 ~~~l~~L~~~ea~~Lf~~~a~~~~~~~~~~~l~~~~~~I~~~~~GlPLai 391 (600)
.+.+.+++.++-...+.+.+..... ..+ .+....|++.|+|.+.-+
T Consensus 154 ~i~~~~~~~~~i~~~l~~i~~~e~~-~i~---~~~l~~I~~~s~Gd~R~a 199 (224)
T d1sxjb2 154 ILRYSKLSDEDVLKRLLQIIKLEDV-KYT---NDGLEAIIFTAEGDMRQA 199 (224)
T ss_dssp EEECCCCCHHHHHHHHHHHHHHHTC-CBC---HHHHHHHHHHHTTCHHHH
T ss_pred HhhhcccchhhhHHHHHHHHHhccc-CCC---HHHHHHHHHHcCCcHHHH
Confidence 8999999999999998876643221 222 256788999999988644
No 6
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.83 E-value=1.6e-08 Score=94.99 Aligned_cols=190 Identities=15% Similarity=0.092 Sum_probs=114.3
Q ss_pred CccccccchHHHHHHHHhcCCCCCCCCceEEEEEccCCChHHHHHHHHhhhhhhhc-cCCceEEEEeCCCCCHHHHHHHH
Q 039283 184 DEVYGREKDKEAIVELLLRDDLRADDGFSVVSIKGLGGVGKTTLAQLVNKDDRVQR-HFQIKAWTCVSEDFDVFTVSKSI 262 (600)
Q Consensus 184 ~~~vGR~~e~~~l~~~L~~~~~~~~~~~~vv~I~G~~GiGKTtLA~~v~~~~~~~~-~F~~~~wv~vs~~~~~~~~l~~i 262 (600)
.+++|.+..++.|..|+... ..+.+.++|++|+||||+|+.+++...... .......++.+...........+
T Consensus 12 ~diig~~~~~~~l~~~i~~~------~~~~lll~Gp~G~GKTtl~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (237)
T d1sxjd2 12 DEVTAQDHAVTVLKKTLKSA------NLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKV 85 (237)
T ss_dssp TTCCSCCTTHHHHHHHTTCT------TCCCEEEECSTTSSHHHHHHHHHHHHHHHHHHTTSEEEECSSSCCCHHHHTTHH
T ss_pred HHccCcHHHHHHHHHHHHcC------CCCeEEEECCCCCChHHHHHHHHHHHcCCcccccchhheeccccccchHHHHHH
Confidence 34899999999999999543 344588999999999999999987532221 12233445555444443333222
Q ss_pred HHHhhcCCCCCcccHHHHHHHHHHHhCCCcEEEEEecCCCCChhhHHhhcCCCCCCCCCcEEEEeccChH-H-HhhcCcc
Q 039283 263 LNSIASDQCTDKDDLNLLQEKLKKQLSGKKFLLVLDDVWNENYNSWRALSCPFGAGASGSKIVVTHRNQG-V-AETMRAV 340 (600)
Q Consensus 263 l~~l~~~~~~~~~~~~~l~~~l~~~L~~k~~LlVlDdv~~~~~~~~~~l~~~l~~~~~gs~IlvTtR~~~-v-~~~~~~~ 340 (600)
........ ..... ..+......+.-++|+|++.......+..+...+......+.+++|+.... . .......
T Consensus 86 -~~~~~~~~-~~~~~----~~~~~~~~~~~~viiiDe~d~l~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~l~sr~ 159 (237)
T d1sxjd2 86 -KNFARLTV-SKPSK----HDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASQC 159 (237)
T ss_dssp -HHHHHSCC-CCCCT----THHHHSCCCSCEEEEETTGGGSCHHHHHHHHHHHHHTTTTEEEEEEESCGGGSCHHHHHHS
T ss_pred -HHHhhhhh-hhhhH----HHHhhccccCceEEEEecccccCHHHHHHHhhccccccccccccccccccccccccccchh
Confidence 22211111 10110 112223334555799999977666666655544444445667777665531 1 1112234
Q ss_pred ceeecCCCCHHHHHHHHHHhhcCCCCCCCChhHHHHHHHHHHhhcCchh
Q 039283 341 STKTLKELSDDDCLRVLIQHSLGARDFNIPQSLKEVAEKIVKKCKGLPL 389 (600)
Q Consensus 341 ~~~~l~~L~~~ea~~Lf~~~a~~~~~~~~~~~l~~~~~~I~~~~~GlPL 389 (600)
..+.+.+++.++...++.+.+..... ..++ +..+.|++.++|.+.
T Consensus 160 ~~i~f~~~~~~~~~~~L~~i~~~e~i-~i~~---~~l~~ia~~s~gd~R 204 (237)
T d1sxjd2 160 SKFRFKALDASNAIDRLRFISEQENV-KCDD---GVLERILDISAGDLR 204 (237)
T ss_dssp EEEECCCCCHHHHHHHHHHHHHTTTC-CCCH---HHHHHHHHHTSSCHH
T ss_pred hhhccccccccccchhhhhhhhhhcC-cCCH---HHHHHHHHHcCCCHH
Confidence 67899999999999999877654322 2222 667888999988653
No 7
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=98.81 E-value=4.2e-08 Score=92.34 Aligned_cols=195 Identities=16% Similarity=0.149 Sum_probs=113.7
Q ss_pred CccccccchHHHHHHHHhcCCCCCCCCceEEEEEccCCChHHHHHHHHhhhhhhhccCCceEEEEeCCCCCHHHHHHHHH
Q 039283 184 DEVYGREKDKEAIVELLLRDDLRADDGFSVVSIKGLGGVGKTTLAQLVNKDDRVQRHFQIKAWTCVSEDFDVFTVSKSIL 263 (600)
Q Consensus 184 ~~~vGR~~e~~~l~~~L~~~~~~~~~~~~vv~I~G~~GiGKTtLA~~v~~~~~~~~~F~~~~wv~vs~~~~~~~~l~~il 263 (600)
.+++|.+..++.|..++.... -...+.|+|++|+||||+|+.+.+......... ............+.
T Consensus 12 ~dlig~~~~~~~L~~~i~~~~-----~~~~~Ll~Gp~G~GKtt~a~~~~~~l~~~~~~~-------~~~~~~~~~~~~i~ 79 (239)
T d1njfa_ 12 ADVVGQEHVLTALANGLSLGR-----IHHAYLFSGTRGVGKTSIARLLAKGLNCETGIT-------ATPCGVCDNCREIE 79 (239)
T ss_dssp GGSCSCHHHHHHHHHHHHTTC-----CCSEEEEECSTTSSHHHHHHHHHHHHHCTTCSC-------SSCCSCSHHHHHHH
T ss_pred HHccChHHHHHHHHHHHHcCC-----CCeeEEEECCCCCcHHHHHHHHHHHhcCccccc-------cCccccchHHHHHH
Confidence 368999999999999996542 345688999999999999998876321111110 00111111111111
Q ss_pred HHhhcC----CCCCcccHHHHHHHHHHH----hCCCcEEEEEecCCCCChhhHHhhcCCCCCCCCCcEEEEeccChH-HH
Q 039283 264 NSIASD----QCTDKDDLNLLQEKLKKQ----LSGKKFLLVLDDVWNENYNSWRALSCPFGAGASGSKIVVTHRNQG-VA 334 (600)
Q Consensus 264 ~~l~~~----~~~~~~~~~~l~~~l~~~----L~~k~~LlVlDdv~~~~~~~~~~l~~~l~~~~~gs~IlvTtR~~~-v~ 334 (600)
..-... ........+.....+... ..++.-++|||+++..+......++..+.....++.+|++|.+.. +.
T Consensus 80 ~~~~~~~~~~~~~~~~~i~~ir~~~~~~~~~~~~~~~kviiIde~d~l~~~~q~~Llk~lE~~~~~~~~il~tn~~~~i~ 159 (239)
T d1njfa_ 80 QGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLP 159 (239)
T ss_dssp HTCCTTEEEEETTCSSSHHHHHHHHHSCCCSCSSSSSEEEEEETGGGSCHHHHHHHHHHHHSCCTTEEEEEEESCGGGSC
T ss_pred cCCCCeEEEecchhcCCHHHHHHHHHHHHhccccCCCEEEEEECcccCCHHHHHHHHHHHhcCCCCeEEEEEcCCccccC
Confidence 110000 000111222222222211 124566999999988776666666666655556778888776642 11
Q ss_pred -hhcCccceeecCCCCHHHHHHHHHHhhcCCCCCCCChhHHHHHHHHHHhhcCchh-HHHHH
Q 039283 335 -ETMRAVSTKTLKELSDDDCLRVLIQHSLGARDFNIPQSLKEVAEKIVKKCKGLPL-AAKTL 394 (600)
Q Consensus 335 -~~~~~~~~~~l~~L~~~ea~~Lf~~~a~~~~~~~~~~~l~~~~~~I~~~~~GlPL-ai~~~ 394 (600)
........+.+.+++.++....+...+..... ..+ .+.+..|++.++|.+- |+..+
T Consensus 160 ~~i~SRc~~i~~~~~~~~~i~~~l~~i~~~e~~-~~~---~~~l~~i~~~s~Gd~R~ain~l 217 (239)
T d1njfa_ 160 VTILSRCLQFHLKALDVEQIRHQLEHILNEEHI-AHE---PRALQLLARAAEGSLRDALSLT 217 (239)
T ss_dssp HHHHTTSEEEECCCCCHHHHHHHHHHHHHHHTC-CBC---HHHHHHHHHHTTTCHHHHHHHH
T ss_pred hhHhhhhcccccccCcHHHhhhHHHHHHhhhcc-CCC---HHHHHHHHHHcCCCHHHHHHHH
Confidence 11224478999999999999888776543221 122 2567889999999985 55444
No 8
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=98.77 E-value=3.8e-08 Score=93.10 Aligned_cols=155 Identities=17% Similarity=0.206 Sum_probs=98.1
Q ss_pred ccccccchHHHHHHHHhcCCCCCCCCceEEEEEccCCChHHHHHHHHhhhhhhh---cc-CCceEEE-EeCCCCCHHHHH
Q 039283 185 EVYGREKDKEAIVELLLRDDLRADDGFSVVSIKGLGGVGKTTLAQLVNKDDRVQ---RH-FQIKAWT-CVSEDFDVFTVS 259 (600)
Q Consensus 185 ~~vGR~~e~~~l~~~L~~~~~~~~~~~~vv~I~G~~GiGKTtLA~~v~~~~~~~---~~-F~~~~wv-~vs~~~~~~~~l 259 (600)
.++||++|+++|.+.|.... -.-+.++|++|+|||+|+..+....... .. ....+|. +++.-
T Consensus 19 ~~igRd~Ei~~l~~iL~r~~------k~n~lLVG~~GvGKTalv~~la~ri~~~~vp~~l~~~~i~~l~~~~l------- 85 (268)
T d1r6bx2 19 PLIGREKELERAIQVLCRRR------KNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSL------- 85 (268)
T ss_dssp CCCSCHHHHHHHHHHHTSSS------SCEEEEECCTTSSHHHHHHHHHHHHHHTCSCGGGTTCEEEECCCC---------
T ss_pred cccChHHHHHHHHHHHhcCc------cCCcEEECCCCCcHHHHHHHHHHHHHhCCcccccccceeEEeeechH-------
Confidence 47999999999999996442 3467799999999999998887643211 11 2334443 22211
Q ss_pred HHHHHHhhcCCCCCcccHHHHHHHHHHHh-CCCcEEEEEecCCCC--------ChhhHHhhcCCCCCCCCCcEEEEeccC
Q 039283 260 KSILNSIASDQCTDKDDLNLLQEKLKKQL-SGKKFLLVLDDVWNE--------NYNSWRALSCPFGAGASGSKIVVTHRN 330 (600)
Q Consensus 260 ~~il~~l~~~~~~~~~~~~~l~~~l~~~L-~~k~~LlVlDdv~~~--------~~~~~~~l~~~l~~~~~gs~IlvTtR~ 330 (600)
+.+.. .....++....+...+ +.++.++++|+++.. +......++.+.... ...++|.||..
T Consensus 86 ------iag~~--~~g~~e~r~~~i~~~~~~~~~iIlfiDeih~l~~~g~~~g~~~d~a~~Lkp~L~r-g~i~vIgatT~ 156 (268)
T d1r6bx2 86 ------LAGTK--YRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSS-GKIRVIGSTTY 156 (268)
T ss_dssp -------CCCC--CSSCHHHHHHHHHHHHSSSSCEEEEETTTTTTTTSCCSSSCHHHHHHHHSSCSSS-CCCEEEEEECH
T ss_pred ------hccCc--cchhHHHHHHHHHHHhhccCCceEEecchHHHhcCCCCCCccccHHHHhhHHHhC-CCCeEEEeCCH
Confidence 11111 2233444444444434 457799999998643 112344555554443 35688888888
Q ss_pred hHHHhhcC-------ccceeecCCCCHHHHHHHHHHhh
Q 039283 331 QGVAETMR-------AVSTKTLKELSDDDCLRVLIQHS 361 (600)
Q Consensus 331 ~~v~~~~~-------~~~~~~l~~L~~~ea~~Lf~~~a 361 (600)
+....... .+..+.+++++.+++..++....
T Consensus 157 eey~~~~e~d~al~rrF~~I~V~Eps~e~t~~IL~~~~ 194 (268)
T d1r6bx2 157 QEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLK 194 (268)
T ss_dssp HHHHCCCCCTTSSGGGEEEEECCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHhhcHHHHhhhcccccCCCCHHHHHHHHHHhh
Confidence 77665433 35789999999999999997543
No 9
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}
Probab=98.77 E-value=3e-07 Score=88.31 Aligned_cols=180 Identities=15% Similarity=0.102 Sum_probs=109.5
Q ss_pred CCCccccccchHHHHHHHHhcC---CCCCCCCceEEEEEccCCChHHHHHHHHhhhhhhh---cc-CCceEEEEeCCCCC
Q 039283 182 NEDEVYGREKDKEAIVELLLRD---DLRADDGFSVVSIKGLGGVGKTTLAQLVNKDDRVQ---RH-FQIKAWTCVSEDFD 254 (600)
Q Consensus 182 ~~~~~vGR~~e~~~l~~~L~~~---~~~~~~~~~vv~I~G~~GiGKTtLA~~v~~~~~~~---~~-F~~~~wv~vs~~~~ 254 (600)
.++.+.||+.++++|.+.+... +....+...++.|+|++|+|||++++.+++..... .. .....+++.....+
T Consensus 14 ~P~~~~~Re~e~~~l~~~l~~~~~~~~~~~~~~~~l~l~GppGtGKT~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 93 (287)
T d1w5sa2 14 IPPELRVRRGEAEALARIYLNRLLSGAGLSDVNMIYGSIGRVGIGKTTLAKFTVKRVSEAAAKEGLTVKQAYVNAFNAPN 93 (287)
T ss_dssp CCSSCSSSCHHHHHHHHHHHHHHHTSSCBCCEEEEEECTTCCSSSHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCS
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHcCCCCCCcceEEEeECCCCCCHHHHHHHHHHHHHhhcccccCCceeeeeccccccc
Confidence 3457899999999998876321 11012223456778999999999999998753211 11 13455777777778
Q ss_pred HHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHhC--CCcEEEEEecCCC------CChhhHHh---hc---CCCCCCCC
Q 039283 255 VFTVSKSILNSIASDQCTDKDDLNLLQEKLKKQLS--GKKFLLVLDDVWN------ENYNSWRA---LS---CPFGAGAS 320 (600)
Q Consensus 255 ~~~~l~~il~~l~~~~~~~~~~~~~l~~~l~~~L~--~k~~LlVlDdv~~------~~~~~~~~---l~---~~l~~~~~ 320 (600)
....+..+...+.................+..... +...++++|.+.. ........ +. ..+.....
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iide~d~l~~~~~~~~~~~~~l~~l~~~l~~~~~~~~ 173 (287)
T d1w5sa2 94 LYTILSLIVRQTGYPIQVRGAPALDILKALVDNLYVENHYLLVILDEFQSMLSSPRIAAEDLYTLLRVHEEIPSRDGVNR 173 (287)
T ss_dssp HHHHHHHHHHHHTCCCCCTTCCHHHHHHHHHHHHHHHTCEEEEEEESTHHHHSCTTSCHHHHHHHHTHHHHSCCTTSCCB
T ss_pred hhhHHHHHhhhcccccccccchHHHHHHHHHHHHHhccCccccceeEEEEeccccccchhHHHHHHHHHHhcchhhcccc
Confidence 88888888888776554445555566666655553 4677888887731 11111111 11 12222222
Q ss_pred CcEEEEeccChHHHh--------hcCccceeecCCCCHHHHHHHHHHhh
Q 039283 321 GSKIVVTHRNQGVAE--------TMRAVSTKTLKELSDDDCLRVLIQHS 361 (600)
Q Consensus 321 gs~IlvTtR~~~v~~--------~~~~~~~~~l~~L~~~ea~~Lf~~~a 361 (600)
-..|++++....... .......+.+.+.+.++..+++...+
T Consensus 174 ~~~i~i~~~~~~~~~~~~~~~~~~~r~~~~i~f~~y~~~el~~Il~~r~ 222 (287)
T d1w5sa2 174 IGFLLVASDVRALSYMREKIPQVESQIGFKLHLPAYKSRELYTILEQRA 222 (287)
T ss_dssp EEEEEEEEETHHHHHHHHHCHHHHTTCSEEEECCCCCHHHHHHHHHHHH
T ss_pred eeEEeecccHHHHHHHHhhccchhcccceeeeccCCcHHHHHHHHhhhH
Confidence 334445554432211 11123578899999999999998765
No 10
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=98.74 E-value=2.7e-08 Score=93.10 Aligned_cols=180 Identities=15% Similarity=0.130 Sum_probs=109.0
Q ss_pred CccccccchHHHHHHHHhcCCCCCCCCceEEEEEccCCChHHHHHHHHhhhhhhhccCCc-eEEEEeCCCCCHHHHHHHH
Q 039283 184 DEVYGREKDKEAIVELLLRDDLRADDGFSVVSIKGLGGVGKTTLAQLVNKDDRVQRHFQI-KAWTCVSEDFDVFTVSKSI 262 (600)
Q Consensus 184 ~~~vGR~~e~~~l~~~L~~~~~~~~~~~~vv~I~G~~GiGKTtLA~~v~~~~~~~~~F~~-~~wv~vs~~~~~~~~l~~i 262 (600)
.+++|.++.+++|..|+... ..+.+.|+|++|+||||+|+.+.+.... ..+.. .+-++.+...+...+. ..
T Consensus 24 ~diig~~~~~~~l~~~i~~~------~~~~lll~Gp~G~GKTtla~~iak~l~~-~~~~~~~~e~n~s~~~~~~~~~-~~ 95 (231)
T d1iqpa2 24 DDIVGQEHIVKRLKHYVKTG------SMPHLLFAGPPGVGKTTAALALARELFG-ENWRHNFLELNASDERGINVIR-EK 95 (231)
T ss_dssp TTCCSCHHHHHHHHHHHHHT------CCCEEEEESCTTSSHHHHHHHHHHHHHG-GGHHHHEEEEETTCHHHHHTTH-HH
T ss_pred HHccCcHHHHHHHHHHHHcC------CCCeEEEECCCCCcHHHHHHHHHHHHHh-cccCCCeeEEecCcccchhHHH-HH
Confidence 45999999999999999654 3456889999999999999998874321 11211 1223333211111111 11
Q ss_pred HHHhhcCCCCCcccHHHHHHHHHHHhCCCcEEEEEecCCCCChhhHHhhcCCCCCCCCCcEEEEeccCh-HHHh-hcCcc
Q 039283 263 LNSIASDQCTDKDDLNLLQEKLKKQLSGKKFLLVLDDVWNENYNSWRALSCPFGAGASGSKIVVTHRNQ-GVAE-TMRAV 340 (600)
Q Consensus 263 l~~l~~~~~~~~~~~~~l~~~l~~~L~~k~~LlVlDdv~~~~~~~~~~l~~~l~~~~~gs~IlvTtR~~-~v~~-~~~~~ 340 (600)
....... ......++.++++|++.......+..+...+........+|+||... .+.. .....
T Consensus 96 ~~~~~~~---------------~~~~~~~~~iilide~d~~~~~~~~~ll~~l~~~~~~~~~i~~~n~~~~i~~~l~sR~ 160 (231)
T d1iqpa2 96 VKEFART---------------KPIGGASFKIIFLDEADALTQDAQQALRRTMEMFSSNVRFILSCNYSSKIIEPIQSRC 160 (231)
T ss_dssp HHHHHHS---------------CCGGGCSCEEEEEETGGGSCHHHHHHHHHHHHHTTTTEEEEEEESCGGGSCHHHHHTE
T ss_pred HHHHHhh---------------hhccCCCceEEeehhhhhcchhHHHHHhhhcccCCcceEEEeccCChhhchHhHhCcc
Confidence 1111000 00113467899999998776666666665554444455666666543 2211 12244
Q ss_pred ceeecCCCCHHHHHHHHHHhhcCCCCCCCChhHHHHHHHHHHhhcCchhH
Q 039283 341 STKTLKELSDDDCLRVLIQHSLGARDFNIPQSLKEVAEKIVKKCKGLPLA 390 (600)
Q Consensus 341 ~~~~l~~L~~~ea~~Lf~~~a~~~~~~~~~~~l~~~~~~I~~~~~GlPLa 390 (600)
..+.+.+.+.++....+.+.+..... .. ..+....|++.|+|..--
T Consensus 161 ~~i~~~~~~~~~~~~~l~~~~~~e~i-~i---~~~~l~~I~~~~~gdiR~ 206 (231)
T d1iqpa2 161 AIFRFRPLRDEDIAKRLRYIAENEGL-EL---TEEGLQAILYIAEGDMRR 206 (231)
T ss_dssp EEEECCCCCHHHHHHHHHHHHHTTTC-EE---CHHHHHHHHHHHTTCHHH
T ss_pred ccccccccchhhHHHHHHHHHHHhCC-CC---CHHHHHHHHHHcCCCHHH
Confidence 68999999999999999877654321 11 235678899999997653
No 11
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.70 E-value=5.7e-09 Score=99.22 Aligned_cols=192 Identities=12% Similarity=0.119 Sum_probs=102.1
Q ss_pred CccccccchHHHHHHHHhcCCCCCCCCceEEEEEccCCChHHHHHHHHhhhhhhh----ccCCceEEEEeCCC-------
Q 039283 184 DEVYGREKDKEAIVELLLRDDLRADDGFSVVSIKGLGGVGKTTLAQLVNKDDRVQ----RHFQIKAWTCVSED------- 252 (600)
Q Consensus 184 ~~~vGR~~e~~~l~~~L~~~~~~~~~~~~vv~I~G~~GiGKTtLA~~v~~~~~~~----~~F~~~~wv~vs~~------- 252 (600)
.+++|.++..+.|.+++... .....+.|+|++|+||||+|+.+++..... ..++...|......
T Consensus 11 ~diig~~~~~~~L~~~~~~~-----~~~~~lll~Gp~G~GKTt~~~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (252)
T d1sxje2 11 NALSHNEELTNFLKSLSDQP-----RDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVV 85 (252)
T ss_dssp GGCCSCHHHHHHHHTTTTCT-----TCCCCEEEECSTTSSHHHHHHTHHHHHSCTTCCC------------------CCE
T ss_pred HHccCcHHHHHHHHHHHHcC-----CCCCeEEEECCCCCCHHHHHHHHHHhhcCccccccccccccccccccchhhhhhc
Confidence 35999998888888877543 234457899999999999999988742111 11111222111100
Q ss_pred --------------CCHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHhCCCcEEEEEecCCCCChhhHHhhcCCCCCC
Q 039283 253 --------------FDVFTVSKSILNSIASDQCTDKDDLNLLQEKLKKQLSGKKFLLVLDDVWNENYNSWRALSCPFGAG 318 (600)
Q Consensus 253 --------------~~~~~~l~~il~~l~~~~~~~~~~~~~l~~~l~~~L~~k~~LlVlDdv~~~~~~~~~~l~~~l~~~ 318 (600)
................... ... ..-.....++.-++|||+++......+..+...+...
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~~~~iiiide~d~l~~~~~~~l~~~~e~~ 158 (252)
T d1sxje2 86 SSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQ---VDF----QDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKY 158 (252)
T ss_dssp ECSSEEEECCC----CCHHHHHHHHHHHTTTTC-------------------CCEEEEEECTTSSCHHHHHHHHHHHHHS
T ss_pred cCCccceeeecccccCCcceeeehhhhhhhhhh---hhh----hhcccccCCCceEEEeccccccccccchhhhcccccc
Confidence 0001111111111111000 000 0000111234458999999877666666665555544
Q ss_pred CCCcEEEEeccChH-HH-hhcCccceeecCCCCHHHHHHHHHHhhcCCCCCCCChhHHHHHHHHHHhhcCchhH
Q 039283 319 ASGSKIVVTHRNQG-VA-ETMRAVSTKTLKELSDDDCLRVLIQHSLGARDFNIPQSLKEVAEKIVKKCKGLPLA 390 (600)
Q Consensus 319 ~~gs~IlvTtR~~~-v~-~~~~~~~~~~l~~L~~~ea~~Lf~~~a~~~~~~~~~~~l~~~~~~I~~~~~GlPLa 390 (600)
...+++|+||.+.. +. ........+++.+++.++..+++...+-.... ... .++....|++.+.|.+..
T Consensus 159 ~~~~~~Il~tn~~~~i~~~l~sR~~~i~~~~~~~~~~~~~l~~i~~~e~~-~~~--~~~~l~~i~~~s~Gd~R~ 229 (252)
T d1sxje2 159 SKNIRLIMVCDSMSPIIAPIKSQCLLIRCPAPSDSEISTILSDVVTNERI-QLE--TKDILKRIAQASNGNLRV 229 (252)
T ss_dssp TTTEEEEEEESCSCSSCHHHHTTSEEEECCCCCHHHHHHHHHHHHHHHTC-EEC--CSHHHHHHHHHHTTCHHH
T ss_pred cccccceeeeccccchhhhhhcchheeeecccchhhHHHHHHHHHHHcCC-CCC--cHHHHHHHHHHcCCcHHH
Confidence 56677777776542 11 11123357889999999999988765422111 111 125667889999998754
No 12
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=98.59 E-value=1.2e-07 Score=84.47 Aligned_cols=152 Identities=16% Similarity=0.140 Sum_probs=87.7
Q ss_pred ccccccchHHHHHHHHhcCCCCCCCCceEEEEEccCCChHHHHHHHHhhhhhhh----ccCCceEEEEeCCCCCHHHHHH
Q 039283 185 EVYGREKDKEAIVELLLRDDLRADDGFSVVSIKGLGGVGKTTLAQLVNKDDRVQ----RHFQIKAWTCVSEDFDVFTVSK 260 (600)
Q Consensus 185 ~~vGR~~e~~~l~~~L~~~~~~~~~~~~vv~I~G~~GiGKTtLA~~v~~~~~~~----~~F~~~~wv~vs~~~~~~~~l~ 260 (600)
..+||++|++++.+.|.... -.-+.++|++|+|||++++.++...... ..-+..+|.- +..
T Consensus 23 ~~igRd~Ei~~l~~iL~r~~------k~n~lLvG~pGVGKTalv~~LA~ri~~~~vp~~L~~~~i~~l-----d~~---- 87 (195)
T d1jbka_ 23 PVIGRDEEIRRTIQVLQRRT------KNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLAL-----DMG---- 87 (195)
T ss_dssp CCCSCHHHHHHHHHHHTSSS------SCEEEEECCTTSCHHHHHHHHHHHHHHTCSCGGGTTCEEEEE-----CHH----
T ss_pred CCcCcHHHHHHHHHHHhccC------CCCeEEEecCCcccHHHHHHHHHHHHhCCCCHHHcCceEEEe-----eHH----
Confidence 37899999999999996543 3467899999999999998887643211 1123344421 111
Q ss_pred HHHHHhhcCCCCCcccHHHHHH-HHHHHhC-CCcEEEEEecCCCCCh-------hhHHhhcCCCCCCCCCcEEEEeccCh
Q 039283 261 SILNSIASDQCTDKDDLNLLQE-KLKKQLS-GKKFLLVLDDVWNENY-------NSWRALSCPFGAGASGSKIVVTHRNQ 331 (600)
Q Consensus 261 ~il~~l~~~~~~~~~~~~~l~~-~l~~~L~-~k~~LlVlDdv~~~~~-------~~~~~l~~~l~~~~~gs~IlvTtR~~ 331 (600)
.++ .+.. ...+.++... .+.+..+ ..+.+|++|+++..-. .+...++.+... ....++|.||..+
T Consensus 88 ~Li---Ag~~--~rG~~E~rl~~il~e~~~~~~~iILfIDeih~l~~~g~~~g~~d~~~~Lkp~L~-rg~l~~IgatT~e 161 (195)
T d1jbka_ 88 ALV---AGAK--YRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALA-RGELHCVGATTLD 161 (195)
T ss_dssp HHH---TTTC--SHHHHHHHHHHHHHHHHHSTTTEEEEEETGGGGTT------CCCCHHHHHHHHH-TTSCCEEEEECHH
T ss_pred HHh---ccCC--ccHHHHHHHHHHHHHHhcCCCcEEEEcchHHHHhcCCCCCCcccHHHHHHHHHh-CCCceEEecCCHH
Confidence 111 1111 1122333332 3333323 4589999999954210 011122222221 1346788888776
Q ss_pred HHHhhc-------CccceeecCCCCHHHHHHHH
Q 039283 332 GVAETM-------RAVSTKTLKELSDDDCLRVL 357 (600)
Q Consensus 332 ~v~~~~-------~~~~~~~l~~L~~~ea~~Lf 357 (600)
...... ..+..+.+.+.+.+++..++
T Consensus 162 ey~~~~e~d~aL~rrF~~I~V~Ep~~e~t~~IL 194 (195)
T d1jbka_ 162 EYRQYIEKDAALERRFQKVFVAEPSVEDTIAIL 194 (195)
T ss_dssp HHHHHTTTCHHHHTTEEEEECCCCCHHHHHTTC
T ss_pred HHHHHHHcCHHHHhcCCEeecCCCCHHHHHHHh
Confidence 655433 24578999999999887643
No 13
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=98.58 E-value=5.6e-07 Score=82.24 Aligned_cols=180 Identities=13% Similarity=0.116 Sum_probs=106.3
Q ss_pred cchHHHHHHHHhcCCCCCCCCceEEEEEccCCChHHHHHHHHhhhhhhhccCCceEEEEeCCCCCHHHHHHHHHHHhhc-
Q 039283 190 EKDKEAIVELLLRDDLRADDGFSVVSIKGLGGVGKTTLAQLVNKDDRVQRHFQIKAWTCVSEDFDVFTVSKSILNSIAS- 268 (600)
Q Consensus 190 ~~e~~~l~~~L~~~~~~~~~~~~vv~I~G~~GiGKTtLA~~v~~~~~~~~~F~~~~wv~vs~~~~~~~~l~~il~~l~~- 268 (600)
+...++|.+.+.... -...+.++|++|+||||+|+.+.+...-..... +-......+ ...+......
T Consensus 8 ~~~~~~l~~~~~~~~-----l~h~lLl~Gp~G~GKtt~a~~~a~~l~~~~~~~---~~~~~~~~~----~~~i~~~~~~~ 75 (207)
T d1a5ta2 8 RPDFEKLVASYQAGR-----GHHALLIQALPGMGDDALIYALSRYLLCQQPQG---HKSCGHCRG----CQLMQAGTHPD 75 (207)
T ss_dssp HHHHHHHHHHHHTTC-----CCSEEEEECCTTSCHHHHHHHHHHHHTCSSCBT---TBCCSCSHH----HHHHHHTCCTT
T ss_pred HHHHHHHHHHHHcCC-----cCeEEEEECCCCCcHHHHHHHHHHhcccccccc---cccccccch----hhhhhhccccc
Confidence 445677888775432 345689999999999999998876321000000 000000000 0111111000
Q ss_pred ------CCCCCcccHHHHHHHHHHHh-----CCCcEEEEEecCCCCChhhHHhhcCCCCCCCCCcEEEEeccChH-HHh-
Q 039283 269 ------DQCTDKDDLNLLQEKLKKQL-----SGKKFLLVLDDVWNENYNSWRALSCPFGAGASGSKIVVTHRNQG-VAE- 335 (600)
Q Consensus 269 ------~~~~~~~~~~~l~~~l~~~L-----~~k~~LlVlDdv~~~~~~~~~~l~~~l~~~~~gs~IlvTtR~~~-v~~- 335 (600)
.........++..+ +.+.+ .+++-++|+||++..+......++..+.....++.+|+||.+.. +..
T Consensus 76 ~~~~~~~~~~~~i~~~~ir~-l~~~~~~~~~~~~~kviIide~d~l~~~a~n~Llk~lEep~~~~~fIl~t~~~~~ll~t 154 (207)
T d1a5ta2 76 YYTLAPEKGKNTLGVDAVRE-VTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLAT 154 (207)
T ss_dssp EEEECCCTTCSSBCHHHHHH-HHHHTTSCCTTSSCEEEEESCGGGBCHHHHHHHHHHHTSCCTTEEEEEEESCGGGSCHH
T ss_pred cchhhhhhcccccccchhhH-HhhhhhhccccCccceEEechhhhhhhhhhHHHHHHHHhhcccceeeeeecChhhhhhh
Confidence 00001122232222 22222 24667999999998888888888877777677888888887753 222
Q ss_pred hcCccceeecCCCCHHHHHHHHHHhhcCCCCCCCChhHHHHHHHHHHhhcCchhHH
Q 039283 336 TMRAVSTKTLKELSDDDCLRVLIQHSLGARDFNIPQSLKEVAEKIVKKCKGLPLAA 391 (600)
Q Consensus 336 ~~~~~~~~~l~~L~~~ea~~Lf~~~a~~~~~~~~~~~l~~~~~~I~~~~~GlPLai 391 (600)
..+....+.+.+++.++....+.+.. ..+ .+.+..|++.++|.|-.+
T Consensus 155 I~SRc~~i~~~~~~~~~~~~~L~~~~------~~~---~~~~~~i~~~s~Gs~r~a 201 (207)
T d1a5ta2 155 LRSRCRLHYLAPPPEQYAVTWLSREV------TMS---QDALLAALRLSAGSPGAA 201 (207)
T ss_dssp HHTTSEEEECCCCCHHHHHHHHHHHC------CCC---HHHHHHHHHHTTTCHHHH
T ss_pred hcceeEEEecCCCCHHHHHHHHHHcC------CCC---HHHHHHHHHHcCCCHHHH
Confidence 22345789999999999999887653 111 256788889999998654
No 14
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.37 E-value=1.4e-06 Score=82.15 Aligned_cols=193 Identities=13% Similarity=0.128 Sum_probs=105.1
Q ss_pred CccccccchHHHHHHHHhcC-----------CCCCCCCceEEEEEccCCChHHHHHHHHhhhhhhhccCCceEEEEeCCC
Q 039283 184 DEVYGREKDKEAIVELLLRD-----------DLRADDGFSVVSIKGLGGVGKTTLAQLVNKDDRVQRHFQIKAWTCVSED 252 (600)
Q Consensus 184 ~~~vGR~~e~~~l~~~L~~~-----------~~~~~~~~~vv~I~G~~GiGKTtLA~~v~~~~~~~~~F~~~~wv~vs~~ 252 (600)
.+++|.+..+++|.+||..- .....+..+.+.++|++|+||||+|+.+++.. .-...+++.+..
T Consensus 14 ~dlig~~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~lll~GPpG~GKTt~a~~la~~~-----~~~~~~~~~~~~ 88 (253)
T d1sxja2 14 QQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPPGIGKTTAAHLVAQEL-----GYDILEQNASDV 88 (253)
T ss_dssp GGCCSCHHHHHHHHHHHHTHHHHHHTTTCCCCTTSTTSCSEEEEECSTTSSHHHHHHHHHHHT-----TCEEEEECTTSC
T ss_pred HHhcCCHHHHHHHHHHHHhhhhcchhhhhhhcccCCCCCceEEEECCCCCCHHHHHHHHHHHH-----Hhhhhccccccc
Confidence 46899999999999998530 01123455789999999999999999998732 122445665554
Q ss_pred CCHHHHHHHHHHHhhcCCCC-CcccHHHHHHHHHHHhCCCcEEEEEecCCCCCh---hhHHhhcCCCCCCCCCcEEEEec
Q 039283 253 FDVFTVSKSILNSIASDQCT-DKDDLNLLQEKLKKQLSGKKFLLVLDDVWNENY---NSWRALSCPFGAGASGSKIVVTH 328 (600)
Q Consensus 253 ~~~~~~l~~il~~l~~~~~~-~~~~~~~l~~~l~~~L~~k~~LlVlDdv~~~~~---~~~~~l~~~l~~~~~gs~IlvTt 328 (600)
.+...+ ............. ..... ........++..++++|++..... ..+..+....... ...+++|+
T Consensus 89 ~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~vi~ide~~~~~~~~~~~~~~~~~~~~~~--~~~ii~i~ 161 (253)
T d1sxja2 89 RSKTLL-NAGVKNALDNMSVVGYFKH----NEEAQNLNGKHFVIIMDEVDGMSGGDRGGVGQLAQFCRKT--STPLILIC 161 (253)
T ss_dssp CCHHHH-HHTGGGGTTBCCSTTTTTC--------CCSSTTSEEEEECSGGGCCTTSTTHHHHHHHHHHHC--SSCEEEEE
T ss_pred hhhHHH-HHHHHHHhhcchhhhhhhh----hhhcccccccceEEEeeeccccccchhhhhHHHhhhhccc--cccccccc
Confidence 444332 2222222111110 00000 011122345778999999854321 2233332221111 12244433
Q ss_pred c--Ch-HHHhhcCccceeecCCCCHHHHHHHHHHhhcCCCCCCCChhHHHHHHHHHHhhcCch-hHHH
Q 039283 329 R--NQ-GVAETMRAVSTKTLKELSDDDCLRVLIQHSLGARDFNIPQSLKEVAEKIVKKCKGLP-LAAK 392 (600)
Q Consensus 329 R--~~-~v~~~~~~~~~~~l~~L~~~ea~~Lf~~~a~~~~~~~~~~~l~~~~~~I~~~~~GlP-Lai~ 392 (600)
. .. .+.........+.+.+.+.++....+......... ..++ +....|++.++|.. -||.
T Consensus 162 ~~~~~~~~~~l~~~~~~i~f~~~~~~~i~~~l~~i~~~e~i-~i~~---~~l~~i~~~s~GDiR~ai~ 225 (253)
T d1sxja2 162 NERNLPKMRPFDRVCLDIQFRRPDANSIKSRLMTIAIREKF-KLDP---NVIDRLIQTTRGDIRQVIN 225 (253)
T ss_dssp SCTTSSTTGGGTTTSEEEECCCCCHHHHHHHHHHHHHHHTC-CCCT---THHHHHHHHTTTCHHHHHH
T ss_pred ccccccccccccceeeeeeccccchhHHHHHHHHHHHHhCC-CCCH---HHHHHHHHhCCCcHHHHHH
Confidence 2 22 22222234468999999999999888765432111 1222 34678889999977 4443
No 15
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=98.37 E-value=1.9e-06 Score=80.49 Aligned_cols=179 Identities=18% Similarity=0.122 Sum_probs=100.0
Q ss_pred CccccccchHHHHHHHHhcCCCCCCCCceEEEEEccCCChHHHHHHHHhhhhhhhccCCceEEEEeCCCCCHHHHHHHHH
Q 039283 184 DEVYGREKDKEAIVELLLRDDLRADDGFSVVSIKGLGGVGKTTLAQLVNKDDRVQRHFQIKAWTCVSEDFDVFTVSKSIL 263 (600)
Q Consensus 184 ~~~vGR~~e~~~l~~~L~~~~~~~~~~~~vv~I~G~~GiGKTtLA~~v~~~~~~~~~F~~~~wv~vs~~~~~~~~l~~il 263 (600)
+++||-+.-+++|..++..... ....++.+.++||+|+||||+|+.+++... + ...+++.+....
T Consensus 9 ddivGq~~~~~~L~~~i~~~~~-~~~~~~~~Ll~GPpG~GKTtla~~la~~~~----~-~~~~~~~~~~~~--------- 73 (239)
T d1ixsb2 9 DEYIGQERLKQKLRVYLEAAKA-RKEPLEHLLLFGPPGLGKTTLAHVIAHELG----V-NLRVTSGPAIEK--------- 73 (239)
T ss_dssp GGSCSCHHHHHHHHHHHHHHTT-SSSCCCCEEEECCTTSCHHHHHHHHHHHHT----C-CEEEEETTTCCS---------
T ss_pred HHhCCHHHHHHHHHHHHHHHHh-cCCCCCeEEEECCCCCCHHHHHHHHHHHhC----C-CeEeccCCcccc---------
Confidence 3589999988998888754321 223456788999999999999999986321 1 123444332211
Q ss_pred HHhhcCCCCCcccHHHHHHHHHHHhCCCcEEEEEecCCCCChhhHHhhcCCC--------C----------CCCCCcEEE
Q 039283 264 NSIASDQCTDKDDLNLLQEKLKKQLSGKKFLLVLDDVWNENYNSWRALSCPF--------G----------AGASGSKIV 325 (600)
Q Consensus 264 ~~l~~~~~~~~~~~~~l~~~l~~~L~~k~~LlVlDdv~~~~~~~~~~l~~~l--------~----------~~~~gs~Il 325 (600)
.......+...+. .+.++++|+++......-+.+...+ . ...+...++
T Consensus 74 -------------~~~~~~~~~~~~~-~~~i~~iDe~~~~~~~~~~~l~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~i 139 (239)
T d1ixsb2 74 -------------PGDLAAILANSLE-EGDILFIDEIHRLSRQAEEHLYPAMEDFVMDIVIGQGPAARTIRLELPRFTLI 139 (239)
T ss_dssp -------------HHHHHHHHHTTCC-TTCEEEEETGGGCCHHHHHHHHHHHHHSEEEEECSCTTCCCEEEEECCCCEEE
T ss_pred -------------chhhHHHHHhhcc-CCCeeeeecccccchhHHHhhhhhhhhhhhhhhhccchhhhhcccCCCCEEEE
Confidence 1112222222222 3445667887654332211111100 0 011233444
Q ss_pred Eec-cChHH--HhhcCccceeecCCCCHHHHHHHHHHhhcCCCCCCCChhHHHHHHHHHHhhcCchhHHHHHH
Q 039283 326 VTH-RNQGV--AETMRAVSTKTLKELSDDDCLRVLIQHSLGARDFNIPQSLKEVAEKIVKKCKGLPLAAKTLG 395 (600)
Q Consensus 326 vTt-R~~~v--~~~~~~~~~~~l~~L~~~ea~~Lf~~~a~~~~~~~~~~~l~~~~~~I~~~~~GlPLai~~~~ 395 (600)
.+| +.... .........+.+...+.++...++...+..... .. ..+....|++.+.|.+-.+..+.
T Consensus 140 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i-~~---~~~~l~~ia~~s~gd~R~a~~~l 208 (239)
T d1ixsb2 140 GATTRPGLITAPLLSRFGIVEHLEYYTPEELAQGVMRDARLLGV-RI---TEEAALEIGRRSRGTMRVAKRLF 208 (239)
T ss_dssp EEESCCSSCSCGGGGGCSEEEECCCCCHHHHHHHHHHHHGGGCC-CB---CHHHHHHHHHHTTSSHHHHHHHH
T ss_pred eeccCcccccchhhcccceeeEeeccChhhhhHHHHHHHHHhCC-cc---chHHHHHHHHHcCCCHHHHHHHH
Confidence 444 43211 222223467889999999999888766643221 12 23578899999999886554433
No 16
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=98.30 E-value=2.3e-06 Score=79.91 Aligned_cols=177 Identities=20% Similarity=0.157 Sum_probs=98.3
Q ss_pred CccccccchHHHHHHHHhcCCCCCCCCceEEEEEccCCChHHHHHHHHhhhhhhhccCCceEEEEeCCCCCHHHHHHHHH
Q 039283 184 DEVYGREKDKEAIVELLLRDDLRADDGFSVVSIKGLGGVGKTTLAQLVNKDDRVQRHFQIKAWTCVSEDFDVFTVSKSIL 263 (600)
Q Consensus 184 ~~~vGR~~e~~~l~~~L~~~~~~~~~~~~vv~I~G~~GiGKTtLA~~v~~~~~~~~~F~~~~wv~vs~~~~~~~~l~~il 263 (600)
.+++|.+.-+++|..|+..... .....+.+.++|++|+||||+|+.+++.. . ++ .+.++.+......+
T Consensus 9 ~divGqe~~~~~l~~~i~~~~~-~~~~~~~~L~~GPpGtGKT~lA~~la~~~--~--~~-~~~~~~~~~~~~~~------ 76 (238)
T d1in4a2 9 DEFIGQENVKKKLSLALEAAKM-RGEVLDHVLLAGPPGLGKTTLAHIIASEL--Q--TN-IHVTSGPVLVKQGD------ 76 (238)
T ss_dssp GGCCSCHHHHHHHHHHHHHHHH-HTCCCCCEEEESSTTSSHHHHHHHHHHHH--T--CC-EEEEETTTCCSHHH------
T ss_pred HHcCChHHHHHHHHHHHHHHHh-cCCCCCeEEEECCCCCcHHHHHHHHHhcc--C--CC-cccccCcccccHHH------
Confidence 4589999999999988853211 12334568899999999999999998732 1 22 23334333222221
Q ss_pred HHhhcCCCCCcccHHHHHHHHHHHhCCCcEEEEEecCCCCChhhHHhhc----C--------------CCCCCCCCcEEE
Q 039283 264 NSIASDQCTDKDDLNLLQEKLKKQLSGKKFLLVLDDVWNENYNSWRALS----C--------------PFGAGASGSKIV 325 (600)
Q Consensus 264 ~~l~~~~~~~~~~~~~l~~~l~~~L~~k~~LlVlDdv~~~~~~~~~~l~----~--------------~l~~~~~gs~Il 325 (600)
+...+.. .+++..+++|.+...+...-+.+. . .+....+...+|
T Consensus 77 ----------------~~~~~~~--~~~~~~~~ide~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I 138 (238)
T d1in4a2 77 ----------------MAAILTS--LERGDVLFIDEIHRLNKAVEELLYSAIEDFQIDIMIGKGPSAKSIRIDIQPFTLV 138 (238)
T ss_dssp ----------------HHHHHHH--CCTTCEEEEETGGGCCHHHHHHHHHHHHTSCCCC---------------CCCEEE
T ss_pred ----------------HHHHHHh--hccCCchHHHHHHHhhhHHHhhcccceeeeeeeeeecCcccccccccCCCCeEEE
Confidence 1111211 234566677777544321111100 0 000012244555
Q ss_pred EeccChH-HH--hhcCccceeecCCCCHHHHHHHHHHhhcCCCCCCCChhHHHHHHHHHHhhcCchhHHHHH
Q 039283 326 VTHRNQG-VA--ETMRAVSTKTLKELSDDDCLRVLIQHSLGARDFNIPQSLKEVAEKIVKKCKGLPLAAKTL 394 (600)
Q Consensus 326 vTtR~~~-v~--~~~~~~~~~~l~~L~~~ea~~Lf~~~a~~~~~~~~~~~l~~~~~~I~~~~~GlPLai~~~ 394 (600)
++|.+.. .. ........+.++..+.++...++...+..... .. ..+....|++.++|.+-.+..+
T Consensus 139 ~at~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~---~~~~l~~i~~~s~gd~R~ai~~ 206 (238)
T d1in4a2 139 GATTRSGLLSSPLRSRFGIILELDFYTVKELKEIIKRAASLMDV-EI---EDAAAEMIAKRSRGTPRIAIRL 206 (238)
T ss_dssp EEESCGGGSCHHHHTTCSEEEECCCCCHHHHHHHHHHHHHHTTC-CB---CHHHHHHHHHTSTTCHHHHHHH
T ss_pred EecCCCccccccceeeeeEEEEecCCCHHHHHHHHHHhhhhccc-hh---hHHHHHHHHHhCCCCHHHHHHH
Confidence 5555442 21 11122346789999999999999876643322 12 2256788899999987665443
No 17
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=98.26 E-value=9.5e-07 Score=88.09 Aligned_cols=155 Identities=14% Similarity=0.146 Sum_probs=84.7
Q ss_pred ccccccchHHHHHHHHhcCCCCCCCCceEEEEEccCCChHHHHHHHHhhhhhhh----ccCCceEE-EEeCCCCCHHHHH
Q 039283 185 EVYGREKDKEAIVELLLRDDLRADDGFSVVSIKGLGGVGKTTLAQLVNKDDRVQ----RHFQIKAW-TCVSEDFDVFTVS 259 (600)
Q Consensus 185 ~~vGR~~e~~~l~~~L~~~~~~~~~~~~vv~I~G~~GiGKTtLA~~v~~~~~~~----~~F~~~~w-v~vs~~~~~~~~l 259 (600)
.++||+.+++++++.|.... -.-+.++|++|||||+|+..++...... .-.+..+| ++++.-
T Consensus 23 ~~~gr~~ei~~~~~~L~r~~------k~n~llvG~~GvGKtaiv~~la~~i~~~~vp~~l~~~~i~~ld~~~l------- 89 (387)
T d1qvra2 23 PVIGRDEEIRRVIQILLRRT------KNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKRIVSLQMGSL------- 89 (387)
T ss_dssp CCCSCHHHHHHHHHHHHCSS------CCCCEEEECTTSCHHHHHHHHHHHHHHTCSCTTSTTCEEEEECC----------
T ss_pred CCcCcHHHHHHHHHHHhcCC------CCCCeEECCCCCCHHHHHHHHHHHHHhCCCCHHHcCceEEEeeHhhh-------
Confidence 37899999999999997543 1235788999999999987766532111 12234555 333211
Q ss_pred HHHHHHhhcCCCCCcccHHHHHHH-HHHHhCC-CcEEEEEecCCCCC-------hhhHHhhcCCCCCCCCCcEEEEeccC
Q 039283 260 KSILNSIASDQCTDKDDLNLLQEK-LKKQLSG-KKFLLVLDDVWNEN-------YNSWRALSCPFGAGASGSKIVVTHRN 330 (600)
Q Consensus 260 ~~il~~l~~~~~~~~~~~~~l~~~-l~~~L~~-k~~LlVlDdv~~~~-------~~~~~~l~~~l~~~~~gs~IlvTtR~ 330 (600)
+... . .....+..... +.+.... .+++|++|+++..- ..+...++.+.... ...++|.||..
T Consensus 90 ---~ag~---~--~~g~~e~r~~~i~~~~~~~~~~~ilfide~h~l~~~g~~~g~~d~a~~Lkp~L~r-g~~~~I~~tT~ 160 (387)
T d1qvra2 90 ---LAGA---K--YRGEFEERLKAVIQEVVQSQGEVILFIDELHTVVGAGKAEGAVDAGNMLKPALAR-GELRLIGATTL 160 (387)
T ss_dssp ----------------CHHHHHHHHHHHHHTTCSSEEEEECCC-------------------HHHHHT-TCCCEEEEECH
T ss_pred ---hccc---C--cchhHHHHHHHHHHHhccCCCceEEEeccHHHHhcCCCCCCcccHHHHHHHHHhC-CCcceeeecCH
Confidence 1110 0 11122333333 3333333 47999999996531 01111222222111 23567777776
Q ss_pred hHHHhh------cCccceeecCCCCHHHHHHHHHHhh
Q 039283 331 QGVAET------MRAVSTKTLKELSDDDCLRVLIQHS 361 (600)
Q Consensus 331 ~~v~~~------~~~~~~~~l~~L~~~ea~~Lf~~~a 361 (600)
...... ...++.+.+.+.+.+++..++....
T Consensus 161 ~ey~~~e~d~al~rrF~~v~v~ep~~~~~~~il~~~~ 197 (387)
T d1qvra2 161 DEYREIEKDPALERRFQPVYVDEPTVEETISILRGLK 197 (387)
T ss_dssp HHHHHHTTCTTTCSCCCCEEECCCCHHHHHHHHHHHH
T ss_pred HHHHHhcccHHHHHhcccccCCCCcHHHHHHHHHHHH
Confidence 655432 1245789999999999999987554
No 18
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.12 E-value=3e-05 Score=72.96 Aligned_cols=179 Identities=14% Similarity=0.110 Sum_probs=99.8
Q ss_pred ccccccchHHHHHHHHh----cCCC---CCCCCceEEEEEccCCChHHHHHHHHhhhhhhhccCCceEEEEeCCCCCHHH
Q 039283 185 EVYGREKDKEAIVELLL----RDDL---RADDGFSVVSIKGLGGVGKTTLAQLVNKDDRVQRHFQIKAWTCVSEDFDVFT 257 (600)
Q Consensus 185 ~~vGR~~e~~~l~~~L~----~~~~---~~~~~~~vv~I~G~~GiGKTtLA~~v~~~~~~~~~F~~~~wv~vs~~~~~~~ 257 (600)
.+.|-++.+++|.+.+. .++. .+-...+-+.++|++|+|||+||+.+.+.. ..+| +.++.+
T Consensus 5 dv~G~~~~k~~l~~~i~~~l~~~~~~~~~g~~~~~giLL~GppGtGKT~l~~ala~~~--~~~~---~~i~~~------- 72 (258)
T d1e32a2 5 DVGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANET--GAFF---FLINGP------- 72 (258)
T ss_dssp GCCSCSHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEEEECCTTSSHHHHHHHHHHHT--TCEE---EEECHH-------
T ss_pred hhccHHHHHHHHHHHHHHHhcCHHHHHhCCCCCCceeEEecCCCCCchHHHHHHHHHh--CCeE---EEEEch-------
Confidence 47899999988888742 1100 012345678999999999999999998732 1111 122211
Q ss_pred HHHHHHHHhhcCCCCCcccHHHHHHHHHHHhCCCcEEEEEecCCCCCh-------hh----HHhhcCCC--CCCCCCcEE
Q 039283 258 VSKSILNSIASDQCTDKDDLNLLQEKLKKQLSGKKFLLVLDDVWNENY-------NS----WRALSCPF--GAGASGSKI 324 (600)
Q Consensus 258 ~l~~il~~l~~~~~~~~~~~~~l~~~l~~~L~~k~~LlVlDdv~~~~~-------~~----~~~l~~~l--~~~~~gs~I 324 (600)
.+.... .......+...+...-..++++|++||++.... +. ...+...+ .....+.-|
T Consensus 73 -------~l~~~~--~g~~~~~l~~~f~~A~~~~p~il~iDeid~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~vlv 143 (258)
T d1e32a2 73 -------EIMSKL--AGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIV 143 (258)
T ss_dssp -------HHTTSC--TTHHHHHHHHHHHHHHHTCSEEEEESSGGGTCCHHHHCCCTTHHHHHHHHHHHHHTCCCSSCEEE
T ss_pred -------hhcccc--cccHHHHHHHHHHHHHhcCCeEEEehhhhhhccCCCCCCCchHHHHHHHhccccccccccCCccE
Confidence 111111 122233334444444457899999999954210 01 11111111 122345566
Q ss_pred EEeccChHHHh-hcC----ccceeecCCCCHHHHHHHHHHhhcCCCCCCCChhHHHHHHHHHHhhcCchh
Q 039283 325 VVTHRNQGVAE-TMR----AVSTKTLKELSDDDCLRVLIQHSLGARDFNIPQSLKEVAEKIVKKCKGLPL 389 (600)
Q Consensus 325 lvTtR~~~v~~-~~~----~~~~~~l~~L~~~ea~~Lf~~~a~~~~~~~~~~~l~~~~~~I~~~~~GlPL 389 (600)
|.||....... .+. -...+.++..+.++-.++|....... ....... ...|++.+.|+--
T Consensus 144 i~tTn~~~~ld~al~r~gRfd~~i~~~~P~~~~R~~il~~~l~~~-~~~~~~~----~~~la~~t~G~s~ 208 (258)
T d1e32a2 144 MAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNM-KLADDVD----LEQVANETHGHVG 208 (258)
T ss_dssp EEEESCGGGSCGGGTSTTSSCEEEECCCCCHHHHHHHHHHTTTTS-CBCTTCC----HHHHHHHCTTCCH
T ss_pred EEeCCCccccchhhhhcccccceeECCCCCHHHHHHHhhhhccCc-ccccccc----hhhhhhcccCCCH
Confidence 77887653322 111 23689999999999999998765322 1111112 4568888888643
No 19
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=98.10 E-value=2.6e-05 Score=71.02 Aligned_cols=172 Identities=14% Similarity=0.183 Sum_probs=94.6
Q ss_pred ccccccchH--HHHHHHHhcCCCCCCCCceEEEEEccCCChHHHHHHHHhhhhhhhccCCceEEEEeCCCCCHHHHHHHH
Q 039283 185 EVYGREKDK--EAIVELLLRDDLRADDGFSVVSIKGLGGVGKTTLAQLVNKDDRVQRHFQIKAWTCVSEDFDVFTVSKSI 262 (600)
Q Consensus 185 ~~vGR~~e~--~~l~~~L~~~~~~~~~~~~vv~I~G~~GiGKTtLA~~v~~~~~~~~~F~~~~wv~vs~~~~~~~~l~~i 262 (600)
-++|...+. ..+.++....+ .....+.|+|++|+|||.|++++++.. ......+++++ ..++...+
T Consensus 12 F~vg~~N~~a~~~~~~~~~~~~----~~~n~l~l~G~~G~GKTHLl~A~~~~~--~~~~~~~~~~~------~~~~~~~~ 79 (213)
T d1l8qa2 12 FIVGEGNRLAYEVVKEALENLG----SLYNPIFIYGSVGTGKTHLLQAAGNEA--KKRGYRVIYSS------ADDFAQAM 79 (213)
T ss_dssp CCCCTTTHHHHHHHHHHHHTTT----TSCSSEEEECSSSSSHHHHHHHHHHHH--HHTTCCEEEEE------HHHHHHHH
T ss_pred ccCCCcHHHHHHHHHHHHhCcC----CCCCcEEEECCCCCcHHHHHHHHHHHh--ccCccceEEec------hHHHHHHH
Confidence 345654432 33444443332 223447899999999999999999854 33344555654 34455555
Q ss_pred HHHhhcCCCCCcccHHHHHHHHHHHhCCCcEEEEEecCCCCC-hhhHHh-hcCCCCC-CCCCcEEEEeccChH-------
Q 039283 263 LNSIASDQCTDKDDLNLLQEKLKKQLSGKKFLLVLDDVWNEN-YNSWRA-LSCPFGA-GASGSKIVVTHRNQG------- 332 (600)
Q Consensus 263 l~~l~~~~~~~~~~~~~l~~~l~~~L~~k~~LlVlDdv~~~~-~~~~~~-l~~~l~~-~~~gs~IlvTtR~~~------- 332 (600)
...+.... .....+.+ . .--+|+|||++... ...|+. +...+.. ...|..||+||+...
T Consensus 80 ~~~~~~~~------~~~~~~~~----~-~~dll~iDDi~~i~~~~~~~~~lf~lin~~~~~~~~iiits~~~p~~l~~~~ 148 (213)
T d1l8qa2 80 VEHLKKGT------INEFRNMY----K-SVDLLLLDDVQFLSGKERTQIEFFHIFNTLYLLEKQIILASDRHPQKLDGVS 148 (213)
T ss_dssp HHHHHHTC------HHHHHHHH----H-TCSEEEEECGGGGTTCHHHHHHHHHHHHHHHHTTCEEEEEESSCGGGCTTSC
T ss_pred HHHHHccc------hhhHHHHH----h-hccchhhhhhhhhcCchHHHHHHHHHHHHHhhccceEEEecCCcchhccccc
Confidence 55554321 12222222 2 34589999996432 234443 2222221 125778999998642
Q ss_pred --HHhhcCccceeecCCCCHHHHHHHHHHhhcCCCCCCCChhHHHHHHHHHHhh
Q 039283 333 --VAETMRAVSTKTLKELSDDDCLRVLIQHSLGARDFNIPQSLKEVAEKIVKKC 384 (600)
Q Consensus 333 --v~~~~~~~~~~~l~~L~~~ea~~Lf~~~a~~~~~~~~~~~l~~~~~~I~~~~ 384 (600)
+...+.....+.++ ++.++-.+++.+.+-... ...++ +++.-|++.+
T Consensus 149 ~dL~SRL~~g~~~~i~-p~d~~~~~iL~~~a~~rg-l~l~~---~v~~yl~~~~ 197 (213)
T d1l8qa2 149 DRLVSRFEGGILVEIE-LDNKTRFKIIKEKLKEFN-LELRK---EVIDYLLENT 197 (213)
T ss_dssp HHHHHHHHTSEEEECC-CCHHHHHHHHHHHHHHTT-CCCCH---HHHHHHHHHC
T ss_pred hHHHHHhhCceEEEEC-CCcHHHHHHHHHHHHHcC-CCCCH---HHHHHHHHhc
Confidence 22223344677785 577777788777763322 22332 5556666665
No 20
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=98.09 E-value=1.8e-05 Score=74.28 Aligned_cols=179 Identities=13% Similarity=0.117 Sum_probs=98.5
Q ss_pred CccccccchHHHHHHHH---hcCCC---CCCCCceEEEEEccCCChHHHHHHHHhhhhhhhccCCceEEEEeCCCCCHHH
Q 039283 184 DEVYGREKDKEAIVELL---LRDDL---RADDGFSVVSIKGLGGVGKTTLAQLVNKDDRVQRHFQIKAWTCVSEDFDVFT 257 (600)
Q Consensus 184 ~~~vGR~~e~~~l~~~L---~~~~~---~~~~~~~vv~I~G~~GiGKTtLA~~v~~~~~~~~~F~~~~wv~vs~~~~~~~ 257 (600)
.+++|-++.+++|.+.+ ..... -+....+.+.++|++|+|||+||+.+++.. ..+ .+-++.+.-.+
T Consensus 12 ~Di~Gl~~~k~~l~e~v~~~~~~~~~~~~g~~~~~~iLL~GppGtGKT~la~~iA~~~--~~~---~~~i~~~~l~~--- 83 (256)
T d1lv7a_ 12 ADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEA--KVP---FFTISGSDFVE--- 83 (256)
T ss_dssp GGSCSCHHHHHHTHHHHHHHHCGGGC-----CCCCEEEEECCTTSCHHHHHHHHHHHH--TCC---EEEECSCSSTT---
T ss_pred HHHhchHHHHHHHHHHHHHHHCHHHHHHcCCCCCCeEEeeCCCCCCccHHHHHHHHHc--CCC---EEEEEhHHhhh---
Confidence 45889988887776543 22110 012345678899999999999999998633 211 12222222111
Q ss_pred HHHHHHHHhhcCCCCCcccHHHHHHHHHHHhCCCcEEEEEecCCCC----------Chhh----HHhhcCCCC--CCCCC
Q 039283 258 VSKSILNSIASDQCTDKDDLNLLQEKLKKQLSGKKFLLVLDDVWNE----------NYNS----WRALSCPFG--AGASG 321 (600)
Q Consensus 258 ~l~~il~~l~~~~~~~~~~~~~l~~~l~~~L~~k~~LlVlDdv~~~----------~~~~----~~~l~~~l~--~~~~g 321 (600)
. . .......+...+...-...|++|++||++.- .... ...+...+. ....+
T Consensus 84 -----------~-~-~g~~~~~l~~~f~~A~~~~P~il~iDeiD~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~~~~~~ 150 (256)
T d1lv7a_ 84 -----------M-F-VGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEG 150 (256)
T ss_dssp -----------S-C-CCCCHHHHHHHHHHHHTTCSEEEEETTHHHHTCCCSTTSCCTTCHHHHHHHHHHHHHHTCCSSSC
T ss_pred -----------c-c-hhHHHHHHHHHHHHHHHcCCEEEEEEChhhhCccCCCCCCCCcHHHHHHHHHHHHHhhCCCCCCC
Confidence 0 0 1223334445555555678899999998320 0011 122222221 12345
Q ss_pred cEEEEeccChHHH-hhc---Cc-cceeecCCCCHHHHHHHHHHhhcCCCCCCCChhHHHHHHHHHHhhcCch
Q 039283 322 SKIVVTHRNQGVA-ETM---RA-VSTKTLKELSDDDCLRVLIQHSLGARDFNIPQSLKEVAEKIVKKCKGLP 388 (600)
Q Consensus 322 s~IlvTtR~~~v~-~~~---~~-~~~~~l~~L~~~ea~~Lf~~~a~~~~~~~~~~~l~~~~~~I~~~~~GlP 388 (600)
.-||.||...... ..+ +. ...+.+...+.++-.++|........ .....+ ...+++.+.|+.
T Consensus 151 v~vIatTn~~~~ld~al~R~gRfd~~i~i~~P~~~~R~~il~~~l~~~~-~~~~~~----~~~la~~t~G~s 217 (256)
T d1lv7a_ 151 IIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVP-LAPDID----AAIIARGTPGFS 217 (256)
T ss_dssp EEEEEEESCTTTSCGGGGSTTSSCEEEECCCCCHHHHHHHHHHHHTTSC-BCTTCC----HHHHHHTCTTCC
T ss_pred EEEEEeCCCcccCCHhHcCCCCCCEEEECCCcCHHHHHHHHHHhccCCC-cCcccC----HHHHHHhCCCCC
Confidence 5666677754322 221 12 36888999999999999987763322 122222 345677788764
No 21
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=98.08 E-value=2.6e-05 Score=72.69 Aligned_cols=179 Identities=13% Similarity=0.104 Sum_probs=95.3
Q ss_pred CccccccchHHHHHHHH---hcCC---CCCCCCceEEEEEccCCChHHHHHHHHhhhhhhhccCCceEEEEeCCCCCHHH
Q 039283 184 DEVYGREKDKEAIVELL---LRDD---LRADDGFSVVSIKGLGGVGKTTLAQLVNKDDRVQRHFQIKAWTCVSEDFDVFT 257 (600)
Q Consensus 184 ~~~vGR~~e~~~l~~~L---~~~~---~~~~~~~~vv~I~G~~GiGKTtLA~~v~~~~~~~~~F~~~~wv~vs~~~~~~~ 257 (600)
..++|-++.+++|.+.+ .... ..+....+-+.++|++|+|||+||+.+.+.. ..+ .+-++. .+
T Consensus 9 ~di~G~~~~k~~l~~~i~~l~~~~~~~~~g~~~~~giLl~GppGtGKT~la~aia~~~--~~~---~~~i~~------~~ 77 (247)
T d1ixza_ 9 KDVAGAEEAKEELKEIVEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVAGEA--RVP---FITASG------SD 77 (247)
T ss_dssp GGCCSCHHHHHHHHHHHHHHHCHHHHHHTTCCCCSEEEEECCTTSSHHHHHHHHHHHT--TCC---EEEEEH------HH
T ss_pred HHHccHHHHHHHHHHHHHHHHCHHHHHHcCCCCCceEEEecCCCCChhHHHHHHHHHc--CCC---EEEEEh------HH
Confidence 35889988777766543 1110 0012345678999999999999999998732 111 122221 11
Q ss_pred HHHHHHHHhhcCCCCCcccHHHHHHHHHHHhCCCcEEEEEecCCCC-----------Ch---hhHHhhcCCCC--CCCCC
Q 039283 258 VSKSILNSIASDQCTDKDDLNLLQEKLKKQLSGKKFLLVLDDVWNE-----------NY---NSWRALSCPFG--AGASG 321 (600)
Q Consensus 258 ~l~~il~~l~~~~~~~~~~~~~l~~~l~~~L~~k~~LlVlDdv~~~-----------~~---~~~~~l~~~l~--~~~~g 321 (600)
++. .. .......+...+...-...+++|+|||++.. +. .....+...+. ....+
T Consensus 78 ----l~~----~~--~g~~~~~l~~~f~~a~~~~p~Ii~iDeid~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~~~~~~ 147 (247)
T d1ixza_ 78 ----FVE----MF--VGVGAARVRDLFETAKRHAPCIVFIDEIDAVGRKRGSGVGGGNDEREQTLNQLLVEMDGFEKDTA 147 (247)
T ss_dssp ----HHH----SC--TTHHHHHHHHHHHHHTTSSSEEEEEETHHHHHC---------CHHHHHHHHHHHHHHHTCCTTCC
T ss_pred ----hhh----cc--ccHHHHHHHHHHHHHHHcCCEEEEEEChhhhCccCCCCCCCCcHHHHHHHHHHHHHhhCCCCCCC
Confidence 111 11 1122233334444444568999999998420 00 01222221111 12234
Q ss_pred cEEEEeccChHHH-hhc---Cc-cceeecCCCCHHHHHHHHHHhhcCCCCCCCChhHHHHHHHHHHhhcCch
Q 039283 322 SKIVVTHRNQGVA-ETM---RA-VSTKTLKELSDDDCLRVLIQHSLGARDFNIPQSLKEVAEKIVKKCKGLP 388 (600)
Q Consensus 322 s~IlvTtR~~~v~-~~~---~~-~~~~~l~~L~~~ea~~Lf~~~a~~~~~~~~~~~l~~~~~~I~~~~~GlP 388 (600)
.-||.||...... ..+ +. ...+.+.+.+.++..++|......... ..... ...+++.|.|..
T Consensus 148 vivi~tTn~~~~ld~al~R~~Rf~~~i~~~~P~~~eR~~il~~~l~~~~~-~~~~~----~~~la~~t~g~s 214 (247)
T d1ixza_ 148 IVVMAATNRPDILDPALLRPGRFDRQIAIDAPDVKGREQILRIHARGKPL-AEDVD----LALLAKRTPGFV 214 (247)
T ss_dssp EEEEEEESCGGGSCGGGGSTTSSCEEEECCSCCHHHHHHHHHHHHTTSCB-CTTCC----HHHHHHTCTTCC
T ss_pred EEEEEeCCCccccCHhHcCCCCCcEEEEECCcCHHHHHHHHHHHhcccCC-ccccC----HHHHHHHCCCCC
Confidence 4444566654222 222 12 257899999999999999877643221 22222 345667777753
No 22
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.88 E-value=3.6e-05 Score=72.64 Aligned_cols=180 Identities=14% Similarity=0.073 Sum_probs=97.9
Q ss_pred ccccccchHHHHHHHHhc----CC---CCCCCCceEEEEEccCCChHHHHHHHHhhhhhhhccCCceEEEEeCCCCCHHH
Q 039283 185 EVYGREKDKEAIVELLLR----DD---LRADDGFSVVSIKGLGGVGKTTLAQLVNKDDRVQRHFQIKAWTCVSEDFDVFT 257 (600)
Q Consensus 185 ~~vGR~~e~~~l~~~L~~----~~---~~~~~~~~vv~I~G~~GiGKTtLA~~v~~~~~~~~~F~~~~wv~vs~~~~~~~ 257 (600)
.+.|-++.+++|.+.+.. +. ..+-...+-|.++|++|+|||+||+.++... ..+ + +.++ ...
T Consensus 8 di~G~~~~k~~l~~~i~~~l~~~~~~~~~g~~~~~giLL~Gp~GtGKT~l~~ala~~~--~~~----~-~~~~----~~~ 76 (265)
T d1r7ra3 8 DIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC--QAN----F-ISIK----GPE 76 (265)
T ss_dssp SCSSSSCCCCHHHHHTHHHHHCHHHHHHCCCCCCCEEEEBCCTTSSHHHHHHHHHHHT--TCE----E-EEEC----HHH
T ss_pred HhcCHHHHHHHHHHHHHHHhhCHHHHHhCCCCCCCeEEEECCCCCcchhHHHHHHHHh--CCc----E-EEEE----HHH
Confidence 477888877777665521 00 0012345678899999999999999998732 222 1 2222 111
Q ss_pred HHHHHHHHhhcCCCCCcccHHHHHHHHHHHhCCCcEEEEEecCCCCCh----------h----hHHhhcCCCCC--CCCC
Q 039283 258 VSKSILNSIASDQCTDKDDLNLLQEKLKKQLSGKKFLLVLDDVWNENY----------N----SWRALSCPFGA--GASG 321 (600)
Q Consensus 258 ~l~~il~~l~~~~~~~~~~~~~l~~~l~~~L~~k~~LlVlDdv~~~~~----------~----~~~~l~~~l~~--~~~g 321 (600)
+ .... .......+...+...-...+++|+|||++.... . ....+...+.. ...+
T Consensus 77 l--------~~~~--~~~~~~~l~~~f~~A~~~~p~il~ideid~l~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~ 146 (265)
T d1r7ra3 77 L--------LTMW--FGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKN 146 (265)
T ss_dssp H--------HTSC--TTTHHHHHHHHHHHHHHTCSEEEEESSGGGTCCHHHHCCCTTHHHHHHHHHHHHHTCC------C
T ss_pred h--------hhcc--ccchHHHHHHHHHHHHhcCCcceeHHhhhhccccCCCcCCCCcHHHHHHHHHHHHHhhCcCCCCC
Confidence 1 1111 222333444445445557899999999953210 0 11233333332 2235
Q ss_pred cEEEEeccChHHH-hhc---C-ccceeecCCCCHHHHHHHHHHhhcCCCCCCCChhHHHHHHHHHHhhcCchhH
Q 039283 322 SKIVVTHRNQGVA-ETM---R-AVSTKTLKELSDDDCLRVLIQHSLGARDFNIPQSLKEVAEKIVKKCKGLPLA 390 (600)
Q Consensus 322 s~IlvTtR~~~v~-~~~---~-~~~~~~l~~L~~~ea~~Lf~~~a~~~~~~~~~~~l~~~~~~I~~~~~GlPLa 390 (600)
.-||.||...... ..+ + -...+++...+.++-.++|....... ......+ ..+|++++.|...+
T Consensus 147 v~vi~ttn~~~~ld~al~r~gRf~~~i~~~~p~~~~R~~il~~~l~~~-~~~~~~~----l~~la~~t~g~s~~ 215 (265)
T d1r7ra3 147 VFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKS-PVAKDVD----LEFLAKMTNGFSGA 215 (265)
T ss_dssp CEEEECCBSCTTTSCGGGSSTTSEEEEECCCCCCHHHHHHHHHHTTCC-----CCC----CHHHHHHHCSSCCH
T ss_pred EEEEEeCCCchhCCHHHhCCCCccEEEEecchHHHHHHHHHHHHhccC-Cchhhhh----HHHHHhcCCCCCHH
Confidence 5677777755322 211 1 23679999999999999998664321 1111111 35677788776543
No 23
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=97.85 E-value=2.7e-05 Score=72.59 Aligned_cols=48 Identities=17% Similarity=0.190 Sum_probs=34.6
Q ss_pred CccccccchHHHHHHHHh-------cCCCCCCCCceEEEEEccCCChHHHHHHHHhhh
Q 039283 184 DEVYGREKDKEAIVELLL-------RDDLRADDGFSVVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 184 ~~~vGR~~e~~~l~~~L~-------~~~~~~~~~~~vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
..++|..++++.+.+-+. ... ....+-|.++|++|+|||++|+.+++.
T Consensus 9 ~~~i~~~~~i~~i~~~~~~~~~~~~~~~---~~p~~~vLL~GppGtGKT~la~alA~~ 63 (246)
T d1d2na_ 9 NGIIKWGDPVTRVLDDGELLVQQTKNSD---RTPLVSVLLEGPPHSGKTALAAKIAEE 63 (246)
T ss_dssp TCCCCCSHHHHHHHHHHHHHHHHHHHCS---SCSEEEEEEECSTTSSHHHHHHHHHHH
T ss_pred cCCcCcCHHHHHHHHHHHHHHHHHhccC---CCCCeEEEEECcCCCCHHHHHHHHhhc
Confidence 347888777766655442 221 234667899999999999999999873
No 24
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]}
Probab=97.68 E-value=7.1e-05 Score=67.12 Aligned_cols=133 Identities=8% Similarity=-0.052 Sum_probs=79.6
Q ss_pred hHHHHHHHHhcCCCCCCCCceEEEEEccCCChHHHHHHHHhhhhhhh-ccCCceEEEEeCCC-CCHHHHHHHHHHHhhcC
Q 039283 192 DKEAIVELLLRDDLRADDGFSVVSIKGLGGVGKTTLAQLVNKDDRVQ-RHFQIKAWTCVSED-FDVFTVSKSILNSIASD 269 (600)
Q Consensus 192 e~~~l~~~L~~~~~~~~~~~~vv~I~G~~GiGKTtLA~~v~~~~~~~-~~F~~~~wv~vs~~-~~~~~~l~~il~~l~~~ 269 (600)
+++.|..++.. +....+.++|++|+|||++|..+.+..... ...+...++..... ..+.++ +++.+.+...
T Consensus 2 ~~~~l~~~i~~------~~~~~~l~~G~~g~gk~~~a~~l~~~i~~~~~~h~D~~~i~~~~~~I~Id~I-R~i~~~~~~~ 74 (198)
T d2gnoa2 2 QLETLKRIIEK------SEGISILINGEDLSYPREVSLELPEYVEKFPPKASDVLEIDPEGENIGIDDI-RTIKDFLNYS 74 (198)
T ss_dssp HHHHHHHHHHT------CSSEEEEEECSSSSHHHHHHHHHHHHHHTSCCCTTTEEEECCSSSCBCHHHH-HHHHHHHTSC
T ss_pred HHHHHHHHHhc------CCCceEEEECCCCCCHHHHHHHHHHHHhccccCCCCEEEEeCCcCCCCHHHH-HHHHHHHhhC
Confidence 45667777743 356899999999999999998887632111 11123444432211 122222 2333333322
Q ss_pred CCCCcccHHHHHHHHHHHhCCCcEEEEEecCCCCChhhHHhhcCCCCCCCCCcEEEEeccChH-HH-hhcCccceeecCC
Q 039283 270 QCTDKDDLNLLQEKLKKQLSGKKFLLVLDDVWNENYNSWRALSCPFGAGASGSKIVVTHRNQG-VA-ETMRAVSTKTLKE 347 (600)
Q Consensus 270 ~~~~~~~~~~l~~~l~~~L~~k~~LlVlDdv~~~~~~~~~~l~~~l~~~~~gs~IlvTtR~~~-v~-~~~~~~~~~~l~~ 347 (600)
.. .+++=++|+|+++..+...+..++..+-....++.+|++|.+.. +. +.......+.+.+
T Consensus 75 ~~-----------------~~~~KviIId~ad~l~~~aqNaLLK~LEEPp~~t~fiLit~~~~~ll~TI~SRC~~i~~~~ 137 (198)
T d2gnoa2 75 PE-----------------LYTRKYVIVHDCERMTQQAANAFLKALEEPPEYAVIVLNTRRWHYLLPTIKSRVFRVVVNV 137 (198)
T ss_dssp CS-----------------SSSSEEEEETTGGGBCHHHHHHTHHHHHSCCTTEEEEEEESCGGGSCHHHHTTSEEEECCC
T ss_pred cc-----------------cCCCEEEEEeCccccchhhhhHHHHHHhCCCCCceeeeccCChhhCHHHHhcceEEEeCCC
Confidence 11 24555899999999988899998888876667788877777653 22 2222335566654
Q ss_pred C
Q 039283 348 L 348 (600)
Q Consensus 348 L 348 (600)
.
T Consensus 138 p 138 (198)
T d2gnoa2 138 P 138 (198)
T ss_dssp C
T ss_pred c
Confidence 3
No 25
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=97.22 E-value=0.00021 Score=68.95 Aligned_cols=133 Identities=20% Similarity=0.182 Sum_probs=73.2
Q ss_pred ccccccchHHHHHHHHhc---CCCCCCCCceEEEEEccCCChHHHHHHHHhhhhhhhccCCceEEEEeCCCCCHHHHHHH
Q 039283 185 EVYGREKDKEAIVELLLR---DDLRADDGFSVVSIKGLGGVGKTTLAQLVNKDDRVQRHFQIKAWTCVSEDFDVFTVSKS 261 (600)
Q Consensus 185 ~~vGR~~e~~~l~~~L~~---~~~~~~~~~~vv~I~G~~GiGKTtLA~~v~~~~~~~~~F~~~~wv~vs~~~~~~~~l~~ 261 (600)
.++|.+..++.+...+.. .-...+....++.++|++|+|||.||+.+... . +...+-++++.-.+...
T Consensus 23 ~viGQ~~a~~~v~~~v~~~~~~l~~~~~p~~~~lf~Gp~GvGKT~lak~la~~--l---~~~~i~~d~s~~~~~~~---- 93 (315)
T d1r6bx3 23 LVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKA--L---GIELLRFDMSEYMERHT---- 93 (315)
T ss_dssp TSCSCHHHHHHHHHHHHHHHTTCSCTTSCSEEEEEECSTTSSHHHHHHHHHHH--H---TCEEEEEEGGGCSSSSC----
T ss_pred eecChHHHHHHHHHHHHHHHccCCCCCCCceEEEEECCCcchhHHHHHHHHhh--c---cCCeeEeccccccchhh----
Confidence 478988888888776631 11112344568889999999999999998863 2 22334444442211100
Q ss_pred HHHHhhcCCCC-CcccH-HHHHHHHHHHhCCCcEEEEEecCCCCChhhHHhhcCCCCCC-----------CCCcEEEEec
Q 039283 262 ILNSIASDQCT-DKDDL-NLLQEKLKKQLSGKKFLLVLDDVWNENYNSWRALSCPFGAG-----------ASGSKIVVTH 328 (600)
Q Consensus 262 il~~l~~~~~~-~~~~~-~~l~~~l~~~L~~k~~LlVlDdv~~~~~~~~~~l~~~l~~~-----------~~gs~IlvTt 328 (600)
...+.+.... ...+. ..+...+. +....+++||++....+..|..+...+..+ ...+-+|+||
T Consensus 94 -~~~l~g~~~gy~g~~~~~~l~~~~~---~~~~~vvl~DeieKa~~~V~~~lLqild~G~ltd~~Gr~vdf~n~iiI~Ts 169 (315)
T d1r6bx3 94 -VSRLIGAPPGYVGFDQGGLLTDAVI---KHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTT 169 (315)
T ss_dssp -CSSSCCCCSCSHHHHHTTHHHHHHH---HCSSEEEEEETGGGSCHHHHHHHHHHHHHSEEEETTTEEEECTTEEEEEEE
T ss_pred -hhhhcccCCCccccccCChhhHHHH---hCccchhhhcccccccchHhhhhHHhhccceecCCCCCccCccceEEEecc
Confidence 0111111110 00011 11222222 356679999999888877777776554321 2345666776
Q ss_pred cC
Q 039283 329 RN 330 (600)
Q Consensus 329 R~ 330 (600)
.-
T Consensus 170 ni 171 (315)
T d1r6bx3 170 NA 171 (315)
T ss_dssp CS
T ss_pred ch
Confidence 53
No 26
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=97.12 E-value=0.00035 Score=67.33 Aligned_cols=120 Identities=14% Similarity=0.171 Sum_probs=62.3
Q ss_pred cccccchHHHHHHHHhcCC---CCCCCCceEEEEEccCCChHHHHHHHHhhhhhhhccCCceEEEEeCCCCCHHHHHHHH
Q 039283 186 VYGREKDKEAIVELLLRDD---LRADDGFSVVSIKGLGGVGKTTLAQLVNKDDRVQRHFQIKAWTCVSEDFDVFTVSKSI 262 (600)
Q Consensus 186 ~vGR~~e~~~l~~~L~~~~---~~~~~~~~vv~I~G~~GiGKTtLA~~v~~~~~~~~~F~~~~wv~vs~~~~~~~~l~~i 262 (600)
++|.+..++.+...+.... ...+....++.++|+.|+|||.||+.+.... -..-...+-++.+.-.+... .
T Consensus 25 v~GQ~~ai~~v~~~i~~~~~~l~~~~kp~~~~lf~Gp~G~GKt~lak~la~~l--~~~~~~~~~~~~~~~~~~~~-~--- 98 (315)
T d1qvra3 25 VVGQDEAIRAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATL--FDTEEAMIRIDMTEYMEKHA-V--- 98 (315)
T ss_dssp SCSCHHHHHHHHHHHHHHGGGCSCSSSCSEEEEEBSCSSSSHHHHHHHHHHHH--HSSGGGEEEECTTTCCSSGG-G---
T ss_pred EeCHHHHHHHHHHHHHHHhcCCCCCCCCceEEEEECCCcchHHHHHHHHHHHh--cCCCcceEEEeccccccchh-h---
Confidence 6788888887766653211 1022344578899999999999999887632 11111223333333222111 1
Q ss_pred HHHhhcCCC-C-CcccHHHHHHHHHHHhCCCcEEEEEecCCCCChhhHHhhcCCC
Q 039283 263 LNSIASDQC-T-DKDDLNLLQEKLKKQLSGKKFLLVLDDVWNENYNSWRALSCPF 315 (600)
Q Consensus 263 l~~l~~~~~-~-~~~~~~~l~~~l~~~L~~k~~LlVlDdv~~~~~~~~~~l~~~l 315 (600)
..+.+..+ . .......+.+.+++ ....+++||+++...+..+..+...+
T Consensus 99 -~~L~g~~~gyvG~~~~~~l~~~~~~---~p~~Vvl~DEieK~~~~v~~~ll~~l 149 (315)
T d1qvra3 99 -SRLIGAPPGYVGYEEGGQLTEAVRR---RPYSVILFDEIEKAHPDVFNILLQIL 149 (315)
T ss_dssp -GGC--------------CHHHHHHH---CSSEEEEESSGGGSCHHHHHHHHHHH
T ss_pred -hhhcCCCCCCcCcccCChHHHHHHh---CCCcEEEEehHhhcCHHHHHHHHHHh
Confidence 11111110 0 11111223333332 45689999999887777776665544
No 27
>d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=97.00 E-value=0.0013 Score=61.45 Aligned_cols=85 Identities=18% Similarity=0.135 Sum_probs=61.3
Q ss_pred CCceEEEEEccCCChHHHHHHHHhhhhhhhccCCceEEEEeCCCCCHHHHHHHHHHHhhcCCCC----CcccHHHHHHHH
Q 039283 209 DGFSVVSIKGLGGVGKTTLAQLVNKDDRVQRHFQIKAWTCVSEDFDVFTVSKSILNSIASDQCT----DKDDLNLLQEKL 284 (600)
Q Consensus 209 ~~~~vv~I~G~~GiGKTtLA~~v~~~~~~~~~F~~~~wv~vs~~~~~~~~l~~il~~l~~~~~~----~~~~~~~l~~~l 284 (600)
+.-+++-|+|++|+|||+||.+++.... ..=..++|++....+++. +++.++..... ...+.++..+.+
T Consensus 55 p~g~itei~G~~~sGKT~l~l~~~~~aq--k~g~~v~yiDtE~~~~~~-----~a~~~Gvd~d~i~~~~~~~~E~~~~~~ 127 (268)
T d1xp8a1 55 PRGRITEIYGPESGGKTTLALAIVAQAQ--KAGGTCAFIDAEHALDPV-----YARALGVNTDELLVSQPDNGEQALEIM 127 (268)
T ss_dssp ETTSEEEEEESTTSSHHHHHHHHHHHHH--HTTCCEEEEESSCCCCHH-----HHHHTTCCGGGCEEECCSSHHHHHHHH
T ss_pred cCceEEEEecCCccchHHHHHHHHHHHH--hCCCEEEEEECCccCCHH-----HHHHhCCCchhEEEEcCCCHHHHHHHH
Confidence 3456999999999999999988876433 223458899999888874 56777654332 445667766766
Q ss_pred HHHhCC-CcEEEEEecC
Q 039283 285 KKQLSG-KKFLLVLDDV 300 (600)
Q Consensus 285 ~~~L~~-k~~LlVlDdv 300 (600)
..+.+. ..-|||+|-+
T Consensus 128 ~~l~~~~~~~liIiDSi 144 (268)
T d1xp8a1 128 ELLVRSGAIDVVVVDSV 144 (268)
T ss_dssp HHHHTTTCCSEEEEECT
T ss_pred HHHHhcCCCcEEEEecc
Confidence 666654 4669999988
No 28
>d1mo6a1 c.37.1.11 (A:1-269) RecA protein, ATPase-domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.95 E-value=0.0017 Score=60.48 Aligned_cols=86 Identities=20% Similarity=0.137 Sum_probs=60.7
Q ss_pred CCceEEEEEccCCChHHHHHHHHhhhhhhhccCCceEEEEeCCCCCHHHHHHHHHHHhhcCCCC----CcccHHHHHHHH
Q 039283 209 DGFSVVSIKGLGGVGKTTLAQLVNKDDRVQRHFQIKAWTCVSEDFDVFTVSKSILNSIASDQCT----DKDDLNLLQEKL 284 (600)
Q Consensus 209 ~~~~vv~I~G~~GiGKTtLA~~v~~~~~~~~~F~~~~wv~vs~~~~~~~~l~~il~~l~~~~~~----~~~~~~~l~~~l 284 (600)
+.-+++-|+|++|+|||+||..++.... ..-..++|++....++... +++++..... .....++..+.+
T Consensus 58 ~~g~i~e~~G~~~~GKT~l~l~~~~~~q--~~g~~~vyIDtE~~~~~e~-----a~~~GvD~d~il~~~~~~~E~~~~~~ 130 (269)
T d1mo6a1 58 PRGRVIEIYGPESSGKTTVALHAVANAQ--AAGGVAAFIDAEHALDPDY-----AKKLGVDTDSLLVSQPDTGEQALEIA 130 (269)
T ss_dssp CSSSEEEEECSSSSSHHHHHHHHHHHHH--HTTCEEEEEESSCCCCHHH-----HHHHTCCGGGCEEECCSSHHHHHHHH
T ss_pred ccceeEEEecCCCcHHHHHHHHHHHHHh--cCCCEEEEEECCccCCHHH-----HHHhCCCHHHeEEecCCCHHHHHHHH
Confidence 4567999999999999999987776433 3344688999999888754 4555544322 345566666666
Q ss_pred HHHhC-CCcEEEEEecCC
Q 039283 285 KKQLS-GKKFLLVLDDVW 301 (600)
Q Consensus 285 ~~~L~-~k~~LlVlDdv~ 301 (600)
....+ ++.-|||+|.+-
T Consensus 131 ~~l~~~~~~~liIiDSi~ 148 (269)
T d1mo6a1 131 DMLIRSGALDIVVIDSVA 148 (269)
T ss_dssp HHHHHTTCEEEEEEECST
T ss_pred HHHHhcCCCCEEEEeccc
Confidence 65554 457799999983
No 29
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=96.76 E-value=0.0029 Score=56.39 Aligned_cols=91 Identities=13% Similarity=0.038 Sum_probs=52.5
Q ss_pred CCCceEEEEEccCCChHHHHHHHHhhhhhhhccCCceEEEEeCCCCCH--HHHHHHHHHHhhcCCC--CCcccHHHHHHH
Q 039283 208 DDGFSVVSIKGLGGVGKTTLAQLVNKDDRVQRHFQIKAWTCVSEDFDV--FTVSKSILNSIASDQC--TDKDDLNLLQEK 283 (600)
Q Consensus 208 ~~~~~vv~I~G~~GiGKTtLA~~v~~~~~~~~~F~~~~wv~vs~~~~~--~~~l~~il~~l~~~~~--~~~~~~~~l~~~ 283 (600)
.+.+.++.++|+.|+||||.+..+..... .....+.+-..+.+.+ .+-++...+.++.+.. ....+.......
T Consensus 6 ~~~p~vi~lvGptGvGKTTTiAKLA~~~~---~~g~kV~lit~Dt~R~gA~eQL~~~a~~l~v~~~~~~~~~d~~~~l~~ 82 (211)
T d2qy9a2 6 GKAPFVILMVGVNGVGKTTTIGKLARQFE---QQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQHTGADSASVIFD 82 (211)
T ss_dssp SCTTEEEEEECCTTSCHHHHHHHHHHHHH---TTTCCEEEECCCTTCHHHHHHHHHHHHHTTCCEECCSTTCCHHHHHHH
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHH---HCCCcEEEEecccccccchhhhhhhhhhcCCcccccccCCCHHHHHHH
Confidence 35678999999999999987777765332 2234566555566654 5556667777665432 123343333333
Q ss_pred HHHHhC-CCcEEEEEecCC
Q 039283 284 LKKQLS-GKKFLLVLDDVW 301 (600)
Q Consensus 284 l~~~L~-~k~~LlVlDdv~ 301 (600)
..+..+ ...=++++|=.-
T Consensus 83 ~~~~a~~~~~d~ilIDTaG 101 (211)
T d2qy9a2 83 AIQAAKARNIDVLIADTAG 101 (211)
T ss_dssp HHHHHHHTTCSEEEECCCC
T ss_pred HHHHHHHcCCCEEEeccCC
Confidence 322222 222367777764
No 30
>d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]}
Probab=96.74 E-value=0.0022 Score=59.67 Aligned_cols=84 Identities=24% Similarity=0.165 Sum_probs=57.8
Q ss_pred CceEEEEEccCCChHHHHHHHHhhhhhhhccCCceEEEEeCCCCCHHHHHHHHHHHhhcCCCC----CcccHHHHHHHHH
Q 039283 210 GFSVVSIKGLGGVGKTTLAQLVNKDDRVQRHFQIKAWTCVSEDFDVFTVSKSILNSIASDQCT----DKDDLNLLQEKLK 285 (600)
Q Consensus 210 ~~~vv~I~G~~GiGKTtLA~~v~~~~~~~~~F~~~~wv~vs~~~~~~~~l~~il~~l~~~~~~----~~~~~~~l~~~l~ 285 (600)
.-+++-|+|++|+||||||.+++... +..-..++|++....++.. .++.++..... .....++..+.+.
T Consensus 53 ~g~itei~G~~gsGKTtl~l~~~~~~--q~~g~~~vyidtE~~~~~~-----~a~~~Gvd~d~v~~~~~~~~E~~~~~i~ 125 (263)
T d1u94a1 53 MGRIVEIYGPESSGKTTLTLQVIAAA--QREGKTCAFIDAEHALDPI-----YARKLGVDIDNLLCSQPDTGEQALEICD 125 (263)
T ss_dssp TTSEEEEECSTTSSHHHHHHHHHHHH--HHTTCCEEEEESSCCCCHH-----HHHHTTCCGGGCEEECCSSHHHHHHHHH
T ss_pred CceEEEEecCCCcHHHHHHHHHHHHH--HcCCCEEEEEccccccCHH-----HHHHhCCCHHHEEEecCCCHHHHHHHHH
Confidence 44699999999999999998887744 3334567899998888864 35555544221 3345566666665
Q ss_pred HHhC-CCcEEEEEecC
Q 039283 286 KQLS-GKKFLLVLDDV 300 (600)
Q Consensus 286 ~~L~-~k~~LlVlDdv 300 (600)
...+ ++.-|||+|.+
T Consensus 126 ~l~~~~~~~liViDSi 141 (263)
T d1u94a1 126 ALARSGAVDVIVVDSV 141 (263)
T ss_dssp HHHHHTCCSEEEEECG
T ss_pred HHHhcCCCCEEEEECc
Confidence 5554 44558899988
No 31
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=96.68 E-value=0.00041 Score=60.79 Aligned_cols=24 Identities=25% Similarity=0.209 Sum_probs=21.7
Q ss_pred CceEEEEEccCCChHHHHHHHHhh
Q 039283 210 GFSVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 210 ~~~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
-.+.|+|.|++|+||||||+.+..
T Consensus 6 ~~K~I~i~G~~GsGKTTla~~La~ 29 (192)
T d1lw7a2 6 FAKTVAILGGESSGKSVLVNKLAA 29 (192)
T ss_dssp TCEEEEEECCTTSHHHHHHHHHHH
T ss_pred cceEEEEECCCCCCHHHHHHHHHH
Confidence 357899999999999999999876
No 32
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=96.64 E-value=0.00047 Score=58.42 Aligned_cols=22 Identities=27% Similarity=0.330 Sum_probs=19.6
Q ss_pred eEEEEEccCCChHHHHHHHHhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
++|.|+|++|+||||||+.+..
T Consensus 3 klIii~G~pGsGKTTla~~L~~ 24 (152)
T d1ly1a_ 3 KIILTIGCPGSGKSTWAREFIA 24 (152)
T ss_dssp EEEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHH
Confidence 5788999999999999998764
No 33
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}
Probab=96.62 E-value=0.00052 Score=59.23 Aligned_cols=24 Identities=25% Similarity=0.398 Sum_probs=21.7
Q ss_pred ceEEEEEccCCChHHHHHHHHhhh
Q 039283 211 FSVVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 211 ~~vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
.++++|+|++|+|||||++.+...
T Consensus 2 ~Pvi~itG~~GSGKTTL~~~L~~~ 25 (170)
T d1np6a_ 2 IPLLAFAAWSGTGKTTLLKKLIPA 25 (170)
T ss_dssp CCEEEEECCTTSCHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCHHHHHHHHHHH
Confidence 369999999999999999999874
No 34
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}
Probab=96.61 E-value=0.00037 Score=59.69 Aligned_cols=23 Identities=22% Similarity=0.398 Sum_probs=20.2
Q ss_pred eEEEEEccCCChHHHHHHHHhhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
+.|.|+|++|+||||+|+.+...
T Consensus 3 k~I~l~G~~GsGKSTvak~La~~ 25 (169)
T d1kaga_ 3 RNIFLVGPMGAGKSTIGRQLAQQ 25 (169)
T ss_dssp CCEEEECCTTSCHHHHHHHHHHH
T ss_pred CeEEEECCCCCCHHHHHHHHHHH
Confidence 46888899999999999999863
No 35
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54 (NtrC1), C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=96.60 E-value=0.0044 Score=57.04 Aligned_cols=45 Identities=29% Similarity=0.326 Sum_probs=35.1
Q ss_pred ccccccchHHHHHHHHhcCCCCCCCCceEEEEEccCCChHHHHHHHHhh
Q 039283 185 EVYGREKDKEAIVELLLRDDLRADDGFSVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 185 ~~vGR~~e~~~l~~~L~~~~~~~~~~~~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
+|||....++++.+.+..-.. .-.-|.|.|..|+|||++|+.+..
T Consensus 1 ~~v~~S~~~~~~~~~~~~~a~----~~~pvlI~Ge~GtGK~~~A~~ih~ 45 (247)
T d1ny5a2 1 EYVFESPKMKEILEKIKKISC----AECPVLITGESGVGKEVVARLIHK 45 (247)
T ss_dssp CCCCCSHHHHHHHHHHHHHTT----CCSCEEEECSTTSSHHHHHHHHHH
T ss_pred CeEecCHHHHHHHHHHHHHhC----CCCCEEEECCCCcCHHHHHHHHHH
Confidence 478999889988888865321 122478999999999999999875
No 36
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}
Probab=96.58 E-value=0.001 Score=62.33 Aligned_cols=42 Identities=21% Similarity=0.272 Sum_probs=29.5
Q ss_pred hHHHHHHHHhcCCCCCCCCceEEEEEccCCChHHHHHHHHhhh
Q 039283 192 DKEAIVELLLRDDLRADDGFSVVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 192 e~~~l~~~L~~~~~~~~~~~~vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
.+.+.++.+..... ....++.|.++|++|+||||||+.++..
T Consensus 14 ~~~~~~~~~~~~~~-~~~~P~~ilL~GpPGtGKT~la~~la~~ 55 (273)
T d1gvnb_ 14 RLNDNLEELIQGKK-AVESPTAFLLGGQPGSGKTSLRSAIFEE 55 (273)
T ss_dssp HHHHHHHHHHTTCC-CCSSCEEEEEECCTTSCTHHHHHHHHHH
T ss_pred HHHHHHHHHHhccc-CCCCCEEEEEECCCCCCHHHHHHHHHHH
Confidence 34444444443322 3456778999999999999999999873
No 37
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=96.56 E-value=0.0007 Score=58.88 Aligned_cols=25 Identities=16% Similarity=0.181 Sum_probs=22.1
Q ss_pred CceEEEEEccCCChHHHHHHHHhhh
Q 039283 210 GFSVVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 210 ~~~vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
...+|.|+|++|+||||+|+.+...
T Consensus 5 ~g~~I~l~G~~GsGKTTia~~La~~ 29 (183)
T d1m8pa3 5 QGFTIFLTGYMNSGKDAIARALQVT 29 (183)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHH
Confidence 4578999999999999999999874
No 38
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}
Probab=96.54 E-value=0.00058 Score=59.02 Aligned_cols=22 Identities=32% Similarity=0.475 Sum_probs=20.1
Q ss_pred eEEEEEccCCChHHHHHHHHhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
++|.|+|++|+||||+|+.+..
T Consensus 3 klI~i~G~~GsGKTTva~~L~~ 24 (176)
T d2bdta1 3 KLYIITGPAGVGKSTTCKRLAA 24 (176)
T ss_dssp EEEEEECSTTSSHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHH
Confidence 5899999999999999998875
No 39
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.53 E-value=0.00052 Score=60.00 Aligned_cols=24 Identities=38% Similarity=0.368 Sum_probs=21.4
Q ss_pred eEEEEEccCCChHHHHHHHHhhhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNKDD 235 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~~~ 235 (600)
+.|.|+|++|+|||||++.+....
T Consensus 2 k~v~ItG~~GtGKTtl~~~i~~~l 25 (189)
T d2i3ba1 2 RHVFLTGPPGVGKTTLIHKASEVL 25 (189)
T ss_dssp CCEEEESCCSSCHHHHHHHHHHHH
T ss_pred cEEEEECCCCCcHHHHHHHHHHHH
Confidence 569999999999999999998754
No 40
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=96.52 E-value=0.002 Score=56.82 Aligned_cols=39 Identities=31% Similarity=0.416 Sum_probs=28.3
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEccCCChHHHHHHHHhhh
Q 039283 193 KEAIVELLLRDDLRADDGFSVVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 193 ~~~l~~~L~~~~~~~~~~~~vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
++.|.....+.. ..++-+|+|.|++|+||||||+.+...
T Consensus 7 ~~~~~~~~~~~~---~~~~~iIgI~G~~GSGKSTla~~L~~~ 45 (198)
T d1rz3a_ 7 IDFLCKTILAIK---TAGRLVLGIDGLSRSGKTTLANQLSQT 45 (198)
T ss_dssp HHHHHHHHHTSC---CSSSEEEEEEECTTSSHHHHHHHHHHH
T ss_pred HHHHHHHHHhcc---CCCCEEEEEECCCCCCHHHHHHHHHHH
Confidence 344444444332 345678999999999999999999764
No 41
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.46 E-value=0.001 Score=58.78 Aligned_cols=36 Identities=25% Similarity=0.148 Sum_probs=26.0
Q ss_pred CceEEEEEccCCChHHHHHHHHhhhhhhhccCCceEEE
Q 039283 210 GFSVVSIKGLGGVGKTTLAQLVNKDDRVQRHFQIKAWT 247 (600)
Q Consensus 210 ~~~vv~I~G~~GiGKTtLA~~v~~~~~~~~~F~~~~wv 247 (600)
...+|.|+|++|+||||+|+.+... ....+....++
T Consensus 18 ~g~vI~L~G~pGSGKTTiAk~La~~--l~~~~~~~~~~ 53 (195)
T d1x6va3 18 RGCTVWLTGLSGAGKTTVSMALEEY--LVCHGIPCYTL 53 (195)
T ss_dssp CCEEEEEESSCHHHHHHHHHHHHHH--HHHTTCCEEEE
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHH--HHhcCCCccch
Confidence 4568899999999999999999763 33334333443
No 42
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}
Probab=96.39 E-value=0.001 Score=57.35 Aligned_cols=26 Identities=23% Similarity=0.451 Sum_probs=23.0
Q ss_pred CCceEEEEEccCCChHHHHHHHHhhh
Q 039283 209 DGFSVVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 209 ~~~~vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
...+++.|.|++|+||||+|+.+...
T Consensus 4 ~~~~iivl~G~~GsGKsT~a~~La~~ 29 (171)
T d1knqa_ 4 HDHHIYVLMGVSGSGKSAVASEVAHQ 29 (171)
T ss_dssp TTSEEEEEECSTTSCHHHHHHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHH
Confidence 46789999999999999999998763
No 43
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=96.36 E-value=0.0011 Score=58.86 Aligned_cols=26 Identities=31% Similarity=0.295 Sum_probs=23.0
Q ss_pred CCceEEEEEccCCChHHHHHHHHhhh
Q 039283 209 DGFSVVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 209 ~~~~vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
..+.+|+|.|++|+||||+|+.++..
T Consensus 4 ~kp~iI~i~G~pGSGKsT~a~~La~~ 29 (194)
T d1qf9a_ 4 SKPNVVFVLGGPGSGKGTQCANIVRD 29 (194)
T ss_dssp CCCEEEEEEESTTSSHHHHHHHHHHH
T ss_pred CCCcEEEEECCCCCCHHHHHHHHHHH
Confidence 46789999999999999999999863
No 44
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=96.35 E-value=0.00068 Score=58.56 Aligned_cols=22 Identities=36% Similarity=0.537 Sum_probs=19.6
Q ss_pred eEEEEEccCCChHHHHHHHHhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
..|+|+|++|+||||+|+.+..
T Consensus 5 ~~I~i~G~pGsGKTTia~~La~ 26 (173)
T d1rkba_ 5 PNILLTGTPGVGKTTLGKELAS 26 (173)
T ss_dssp CCEEEECSTTSSHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHH
Confidence 4578999999999999999876
No 45
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.19 E-value=0.0014 Score=58.12 Aligned_cols=26 Identities=38% Similarity=0.452 Sum_probs=23.3
Q ss_pred CCceEEEEEccCCChHHHHHHHHhhh
Q 039283 209 DGFSVVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 209 ~~~~vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
+..++|+|.|++|+||||+|+.++..
T Consensus 6 ~~~~iI~i~GppGSGKsT~a~~La~~ 31 (196)
T d1ukza_ 6 DQVSVIFVLGGPGAGKGTQCEKLVKD 31 (196)
T ss_dssp TTCEEEEEECSTTSSHHHHHHHHHHH
T ss_pred CCCcEEEEECCCCCCHHHHHHHHHHH
Confidence 56889999999999999999999763
No 46
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}
Probab=96.17 E-value=0.0014 Score=56.60 Aligned_cols=25 Identities=28% Similarity=0.405 Sum_probs=21.6
Q ss_pred CCceEEEEEccCCChHHHHHHHHhh
Q 039283 209 DGFSVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 209 ~~~~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
+....|.|.|++|+||||+|+.+..
T Consensus 3 pk~~~I~i~G~~GsGKTT~~~~La~ 27 (174)
T d1y63a_ 3 PKGINILITGTPGTGKTSMAEMIAA 27 (174)
T ss_dssp CSSCEEEEECSTTSSHHHHHHHHHH
T ss_pred CCCCEEEEEeCCCCCHHHHHHHHHH
Confidence 3456799999999999999998876
No 47
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}
Probab=96.16 E-value=0.0012 Score=57.01 Aligned_cols=23 Identities=13% Similarity=0.333 Sum_probs=20.9
Q ss_pred ceEEEEEccCCChHHHHHHHHhh
Q 039283 211 FSVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 211 ~~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
.++|.|.|++|+||||+|+.+..
T Consensus 3 ~kiI~l~G~~GsGKsTva~~L~~ 25 (178)
T d1qhxa_ 3 TRMIILNGGSSAGKSGIVRCLQS 25 (178)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHH
Confidence 36899999999999999999876
No 48
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=96.14 E-value=0.02 Score=50.68 Aligned_cols=58 Identities=14% Similarity=0.033 Sum_probs=35.6
Q ss_pred CCceEEEEEccCCChHHHHHHHHhhhhhhhccCCceEEEEeCCCCC--HHHHHHHHHHHhhcC
Q 039283 209 DGFSVVSIKGLGGVGKTTLAQLVNKDDRVQRHFQIKAWTCVSEDFD--VFTVSKSILNSIASD 269 (600)
Q Consensus 209 ~~~~vv~I~G~~GiGKTtLA~~v~~~~~~~~~F~~~~wv~vs~~~~--~~~~l~~il~~l~~~ 269 (600)
.+.+++.++|+.|+||||.+..+...... +-..+..+++ +.+. ..+-++...+.++.+
T Consensus 8 ~~~~vi~lvGp~GvGKTTTiaKLA~~~~~--~g~kV~lit~-Dt~R~gA~eQL~~~a~~l~v~ 67 (207)
T d1ls1a2 8 KDRNLWFLVGLQGSGKTTTAAKLALYYKG--KGRRPLLVAA-DTQRPAAREQLRLLGEKVGVP 67 (207)
T ss_dssp CSSEEEEEECCTTTTHHHHHHHHHHHHHH--TTCCEEEEEC-CSSCHHHHHHHHHHHHHHTCC
T ss_pred CCCcEEEEECCCCCCHHHHHHHHHHHHHH--CCCcEEEEec-ccccchHHHHHHHHHHhcCCc
Confidence 35689999999999999887777654432 2223444444 3333 345555666666543
No 49
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=96.14 E-value=0.0071 Score=53.88 Aligned_cols=60 Identities=17% Similarity=0.096 Sum_probs=32.8
Q ss_pred CCCceEEEEEccCCChHHHHHHHHhhhhhhhccCCceEEEEeCC-CCCHHHHHHHHHHHhhcC
Q 039283 208 DDGFSVVSIKGLGGVGKTTLAQLVNKDDRVQRHFQIKAWTCVSE-DFDVFTVSKSILNSIASD 269 (600)
Q Consensus 208 ~~~~~vv~I~G~~GiGKTtLA~~v~~~~~~~~~F~~~~wv~vs~-~~~~~~~l~~il~~l~~~ 269 (600)
...+.||.++|+.|+||||.+..++.....+ .. .+..+++.. .....+-++...+.++.+
T Consensus 9 ~k~p~vi~lvGptGvGKTTTiAKLA~~~~~~-g~-kV~lit~Dt~R~ga~eQL~~~a~~l~v~ 69 (211)
T d1j8yf2 9 DKIPYVIMLVGVQGTGKATTAGKLAYFYKKK-GF-KVGLVGADVYRPAALEQLQQLGQQIGVP 69 (211)
T ss_dssp SSSSEEEEEECSCCC----HHHHHHHHHHHT-TC-CEEEEECCCSSHHHHHHHHHHHHHHTCC
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHHC-CC-ceEEEEeeccccchhHHHHHhccccCcc
Confidence 3567899999999999998776666544322 22 345555432 112344555666666544
No 50
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=96.12 E-value=0.00059 Score=65.58 Aligned_cols=50 Identities=26% Similarity=0.308 Sum_probs=34.6
Q ss_pred ccccccchHHHHHHHHhc----CCCC----CCCCceEEEEEccCCChHHHHHHHHhhh
Q 039283 185 EVYGREKDKEAIVELLLR----DDLR----ADDGFSVVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 185 ~~vGR~~e~~~l~~~L~~----~~~~----~~~~~~vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
.++|.++.++.|...+.. .... .....+.+.++||+|+|||.||+.+++.
T Consensus 15 ~ViGQd~A~~~l~~av~~~~~r~~~~~~~~~~~~~~~iLl~GPpG~GKT~lAkalA~~ 72 (309)
T d1ofha_ 15 HIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKL 72 (309)
T ss_dssp TCCSCHHHHHHHHHHHHHHHHTTSSCHHHHHHCCCCCEEEECCTTSSHHHHHHHHHHH
T ss_pred cccChHHHHHHHHHHHHHHHHHhccCCCCccCCCCceEEEECCCCCCHHHHHHHHhhc
Confidence 478888888887765521 1100 0123467789999999999999999873
No 51
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.09 E-value=0.0015 Score=56.65 Aligned_cols=25 Identities=32% Similarity=0.286 Sum_probs=22.1
Q ss_pred CCceEEEEEccCCChHHHHHHHHhh
Q 039283 209 DGFSVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 209 ~~~~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
+.+.+|.++|++|+||||+|+.+..
T Consensus 12 ~~p~liil~G~pGsGKST~a~~l~~ 36 (172)
T d1yj5a2 12 PNPEVVVAVGFPGAGKSTFIQEHLV 36 (172)
T ss_dssp SSCCEEEEECCTTSSHHHHHHHHTG
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHH
Confidence 4678999999999999999988864
No 52
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=96.08 E-value=0.01 Score=52.91 Aligned_cols=91 Identities=14% Similarity=0.071 Sum_probs=49.9
Q ss_pred CCceEEEEEccCCChHHHHHHHHhhhhhhhccCCceEEEEeCC-CCCHHHHHHHHHHHhhcCCCC--CcccHHHHHHHHH
Q 039283 209 DGFSVVSIKGLGGVGKTTLAQLVNKDDRVQRHFQIKAWTCVSE-DFDVFTVSKSILNSIASDQCT--DKDDLNLLQEKLK 285 (600)
Q Consensus 209 ~~~~vv~I~G~~GiGKTtLA~~v~~~~~~~~~F~~~~wv~vs~-~~~~~~~l~~il~~l~~~~~~--~~~~~~~l~~~l~ 285 (600)
..+.++.++|+.|+||||.+..++..... +-..+..+++.. .....+-++...+.++.+... ...+.........
T Consensus 9 ~~p~vi~lvGptGvGKTTTiAKLAa~~~~--~~~kV~lit~Dt~R~gA~eQL~~~a~~l~i~~~~~~~~~d~~~~~~~~~ 86 (213)
T d1vmaa2 9 EPPFVIMVVGVNGTGKTTSCGKLAKMFVD--EGKSVVLAAADTFRAAAIEQLKIWGERVGATVISHSEGADPAAVAFDAV 86 (213)
T ss_dssp SSCEEEEEECCTTSSHHHHHHHHHHHHHH--TTCCEEEEEECTTCHHHHHHHHHHHHHHTCEEECCSTTCCHHHHHHHHH
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHH--CCCceEEEeecccccchhHHHHHHhhhcCccccccCCCCcHHHHHHHHH
Confidence 56789999999999999877667654422 223455555532 223445666667776654221 2233333322222
Q ss_pred -HHhCCCcEEEEEecCC
Q 039283 286 -KQLSGKKFLLVLDDVW 301 (600)
Q Consensus 286 -~~L~~k~~LlVlDdv~ 301 (600)
....+..=+|++|=.-
T Consensus 87 ~~~~~~~~d~ilIDTaG 103 (213)
T d1vmaa2 87 AHALARNKDVVIIDTAG 103 (213)
T ss_dssp HHHHHTTCSEEEEEECC
T ss_pred HHHHHcCCCEEEEeccc
Confidence 1112222367777764
No 53
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=96.08 E-value=0.007 Score=53.79 Aligned_cols=59 Identities=17% Similarity=0.008 Sum_probs=39.4
Q ss_pred CCceEEEEEccCCChHHHHHHHHhhhhhhhccCCceEEEEeCC-CCCHHHHHHHHHHHhhcC
Q 039283 209 DGFSVVSIKGLGGVGKTTLAQLVNKDDRVQRHFQIKAWTCVSE-DFDVFTVSKSILNSIASD 269 (600)
Q Consensus 209 ~~~~vv~I~G~~GiGKTtLA~~v~~~~~~~~~F~~~~wv~vs~-~~~~~~~l~~il~~l~~~ 269 (600)
++.+++.++|+.|+||||.+..++..... +=..+..++... .....+-++...+.++.+
T Consensus 4 ~~~~vi~lvGptGvGKTTTiaKLA~~~~~--~g~kV~lit~Dt~R~gA~eQL~~~a~~l~i~ 63 (207)
T d1okkd2 4 PKGRVVLVVGVNGVGKTTTIAKLGRYYQN--LGKKVMFCAGDTFRAAGGTQLSEWGKRLSIP 63 (207)
T ss_dssp CSSSEEEEECSTTSSHHHHHHHHHHHHHT--TTCCEEEECCCCSSTTHHHHHHHHHHHHTCC
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHH--CCCcEEEEEeccccccchhhHhhcccccCce
Confidence 45689999999999999887777654332 223455665532 345666777777777654
No 54
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=96.00 E-value=0.0019 Score=55.76 Aligned_cols=23 Identities=26% Similarity=0.463 Sum_probs=20.7
Q ss_pred ceEEEEEccCCChHHHHHHHHhh
Q 039283 211 FSVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 211 ~~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
.++|.|.|++|+||||+|+.+..
T Consensus 4 g~iI~l~G~~GsGKSTia~~La~ 26 (176)
T d1zp6a1 4 GNILLLSGHPGSGKSTIAEALAN 26 (176)
T ss_dssp TEEEEEEECTTSCHHHHHHHHHT
T ss_pred CeEEEEECCCCCCHHHHHHHHHH
Confidence 47999999999999999988865
No 55
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=95.98 E-value=0.0018 Score=57.95 Aligned_cols=24 Identities=21% Similarity=0.360 Sum_probs=21.5
Q ss_pred ceEEEEEccCCChHHHHHHHHhhh
Q 039283 211 FSVVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 211 ~~vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
+.+|.++|.+|+||||||++++..
T Consensus 2 p~li~l~GlpgsGKSTla~~L~~~ 25 (213)
T d1bifa1 2 PTLIVMVGLPARGKTYISKKLTRY 25 (213)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHH
Confidence 468999999999999999999864
No 56
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=95.97 E-value=0.0017 Score=56.61 Aligned_cols=23 Identities=43% Similarity=0.637 Sum_probs=21.0
Q ss_pred eEEEEEccCCChHHHHHHHHhhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
++|+|.|++|+||||+++.+...
T Consensus 2 kiI~i~G~~GsGKsT~~~~L~~~ 24 (190)
T d1khta_ 2 KVVVVTGVPGVGSTTSSQLAMDN 24 (190)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHH
Confidence 68999999999999999999764
No 57
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]}
Probab=95.97 E-value=0.012 Score=55.71 Aligned_cols=81 Identities=19% Similarity=0.137 Sum_probs=47.6
Q ss_pred CCCceEEEEEccCCChHHHHHHHHhhhhhhhccC--CceEEEEeCCCCCHHHHHHHHHHHhhcC-CCCCcccHHHHHHHH
Q 039283 208 DDGFSVVSIKGLGGVGKTTLAQLVNKDDRVQRHF--QIKAWTCVSEDFDVFTVSKSILNSIASD-QCTDKDDLNLLQEKL 284 (600)
Q Consensus 208 ~~~~~vv~I~G~~GiGKTtLA~~v~~~~~~~~~F--~~~~wv~vs~~~~~~~~l~~il~~l~~~-~~~~~~~~~~l~~~l 284 (600)
...+-+|+|.|.+|+||||+|+.+... ....+ ..+.-++...-+-....+.. ..+... ...+..|.+.+.+.|
T Consensus 77 ~k~P~iIGIaG~sgSGKSTla~~L~~l--L~~~~~~~~v~~Is~D~F~~~~~~l~~--~~~~~~~g~Pes~D~~~L~~~L 152 (308)
T d1sq5a_ 77 QRIPYIISIAGSVAVGKSTTARVLQAL--LSRWPEHRRVELITTDGFLHPNQVLKE--RGLMKKKGFPESYDMHRLVKFV 152 (308)
T ss_dssp CCCCEEEEEEECTTSSHHHHHHHHHHH--HTTSTTCCCEEEEEGGGGBCCHHHHHH--HTCTTCTTSGGGBCHHHHHHHH
T ss_pred CCCCEEEEEeCCCCCCCcHHHHHHHHH--HhhhcCCCceEEEeeeeeECCchHHHH--hcCCccCCchHhhhHHHHHHHH
Confidence 466789999999999999999988753 22222 22334443332222222221 111111 112567888888888
Q ss_pred HHHhCCCc
Q 039283 285 KKQLSGKK 292 (600)
Q Consensus 285 ~~~L~~k~ 292 (600)
....++++
T Consensus 153 ~~lk~g~~ 160 (308)
T d1sq5a_ 153 SDLKSGVP 160 (308)
T ss_dssp HHHTTTCS
T ss_pred HHHHcCCC
Confidence 88876654
No 58
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=95.93 E-value=0.0017 Score=55.87 Aligned_cols=21 Identities=33% Similarity=0.566 Sum_probs=17.6
Q ss_pred EEEEccCCChHHHHHHHHhhh
Q 039283 214 VSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 214 v~I~G~~GiGKTtLA~~v~~~ 234 (600)
|.+.|++|+||||+++.+...
T Consensus 4 IvliG~~G~GKSTig~~La~~ 24 (165)
T d2iyva1 4 AVLVGLPGSGKSTIGRRLAKA 24 (165)
T ss_dssp EEEECSTTSSHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHH
Confidence 445599999999999999863
No 59
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=95.87 E-value=0.0045 Score=56.57 Aligned_cols=42 Identities=19% Similarity=0.119 Sum_probs=32.9
Q ss_pred CCceEEEEEccCCChHHHHHHHHhhhhhhhccCCceEEEEeCCC
Q 039283 209 DGFSVVSIKGLGGVGKTTLAQLVNKDDRVQRHFQIKAWTCVSED 252 (600)
Q Consensus 209 ~~~~vv~I~G~~GiGKTtLA~~v~~~~~~~~~F~~~~wv~vs~~ 252 (600)
+.-.++.|+|++|+|||+||.++..+ ...+...++|++....
T Consensus 24 ~~gsl~li~G~pGsGKT~l~~qia~~--~~~~~~~~~~is~e~~ 65 (242)
T d1tf7a2 24 FKDSIILATGATGTGKTLLVSRFVEN--ACANKERAILFAYEES 65 (242)
T ss_dssp ESSCEEEEEECTTSSHHHHHHHHHHH--HHTTTCCEEEEESSSC
T ss_pred cCCeEEEEEeCCCCCHHHHHHHHHHH--HHHhccccceeeccCC
Confidence 34579999999999999999998874 4455667888886543
No 60
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Probab=95.85 E-value=0.0018 Score=56.15 Aligned_cols=21 Identities=43% Similarity=0.599 Sum_probs=19.4
Q ss_pred EEEEccCCChHHHHHHHHhhh
Q 039283 214 VSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 214 v~I~G~~GiGKTtLA~~v~~~ 234 (600)
|+|+|++|+|||||++.+...
T Consensus 3 i~I~G~~G~GKSTLl~~i~~~ 23 (178)
T d1ye8a1 3 IIITGEPGVGKTTLVKKIVER 23 (178)
T ss_dssp EEEECCTTSSHHHHHHHHHHH
T ss_pred EEEECCCCcHHHHHHHHHHhc
Confidence 799999999999999999874
No 61
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=95.83 E-value=0.019 Score=51.71 Aligned_cols=54 Identities=13% Similarity=0.173 Sum_probs=33.0
Q ss_pred HHHHHhCCCcEEEEEecCCC-CChhhHHhhcCCCCC--CCCCcEEEEeccChHHHhh
Q 039283 283 KLKKQLSGKKFLLVLDDVWN-ENYNSWRALSCPFGA--GASGSKIVVTHRNQGVAET 336 (600)
Q Consensus 283 ~l~~~L~~k~~LlVlDdv~~-~~~~~~~~l~~~l~~--~~~gs~IlvTtR~~~v~~~ 336 (600)
.+...|..+|-+|++|.--. .|+..-..+...+.. ...|..||++|.+..++..
T Consensus 155 aIAraL~~~P~lLllDEPTs~LD~~~~~~i~~~l~~l~~~~g~tii~vTHd~~~a~~ 211 (230)
T d1l2ta_ 155 AIARALANNPPIILADQPTGALDSKTGEKIMQLLKKLNEEDGKTVVVVTHDINVARF 211 (230)
T ss_dssp HHHHHHTTCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHTTCCEEEEECSCHHHHTT
T ss_pred HHHhhhhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHhhCCEEEEECCCHHHHHh
Confidence 45566677888999999732 233333333332222 1347788888888887754
No 62
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=95.83 E-value=0.0038 Score=56.54 Aligned_cols=22 Identities=32% Similarity=0.545 Sum_probs=19.9
Q ss_pred eEEEEEccCCChHHHHHHHHhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
.+++|.|+.|+|||||.+.+.-
T Consensus 27 ei~~liGpsGsGKSTLl~~i~G 48 (232)
T d2awna2 27 EFVVFVGPSGCGKSTLLRMIAG 48 (232)
T ss_dssp CEEEEECCTTSSHHHHHHHHHT
T ss_pred CEEEEECCCCChHHHHHHHHhc
Confidence 5999999999999999998854
No 63
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]}
Probab=95.81 E-value=0.01 Score=56.29 Aligned_cols=22 Identities=32% Similarity=0.564 Sum_probs=19.6
Q ss_pred eEEEEEccCCChHHHHHHHHhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
.++.++|++|+|||.||+.+..
T Consensus 124 g~~l~~G~pG~GKT~la~ala~ 145 (321)
T d1w44a_ 124 GMVIVTGKGNSGKTPLVHALGE 145 (321)
T ss_dssp EEEEEECSSSSCHHHHHHHHHH
T ss_pred ceEEEECCCCccHHHHHHHHHH
Confidence 4667799999999999999987
No 64
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}
Probab=95.80 E-value=0.0025 Score=54.73 Aligned_cols=24 Identities=29% Similarity=0.256 Sum_probs=21.4
Q ss_pred eEEEEEccCCChHHHHHHHHhhhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNKDD 235 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~~~ 235 (600)
++++|+|..|+|||||+..+....
T Consensus 2 kii~I~G~~gSGKTTli~~l~~~L 25 (165)
T d1xjca_ 2 NVWQVVGYKHSGKTTLMEKWVAAA 25 (165)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHH
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHH
Confidence 589999999999999999988743
No 65
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=95.76 E-value=0.0022 Score=54.97 Aligned_cols=21 Identities=43% Similarity=0.661 Sum_probs=18.8
Q ss_pred EEEEccCCChHHHHHHHHhhh
Q 039283 214 VSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 214 v~I~G~~GiGKTtLA~~v~~~ 234 (600)
|.|.||+|+||||+++.+...
T Consensus 3 I~liG~~GsGKsTi~k~La~~ 23 (161)
T d1viaa_ 3 IVFIGFMGSGKSTLARALAKD 23 (161)
T ss_dssp EEEECCTTSCHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHH
Confidence 677899999999999999874
No 66
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}
Probab=95.64 E-value=0.0023 Score=55.32 Aligned_cols=22 Identities=23% Similarity=0.386 Sum_probs=19.1
Q ss_pred EEEEEccCCChHHHHHHHHhhh
Q 039283 213 VVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
.|.|+|++|+||||+|+.++..
T Consensus 4 ~Iil~G~~GsGKSTia~~LA~~ 25 (170)
T d1e6ca_ 4 PIFMVGARGCGMTTVGRELARA 25 (170)
T ss_dssp CEEEESCTTSSHHHHHHHHHHH
T ss_pred CEEEECCCCCCHHHHHHHHHHH
Confidence 4668899999999999999863
No 67
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.64 E-value=0.003 Score=55.69 Aligned_cols=24 Identities=29% Similarity=0.234 Sum_probs=21.3
Q ss_pred ceEEEEEccCCChHHHHHHHHhhh
Q 039283 211 FSVVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 211 ~~vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
+.+|.|.|++|+||||+|+.+++.
T Consensus 1 p~iI~i~GppGSGKsT~a~~La~~ 24 (194)
T d1teva_ 1 PLVVFVLGGPGAGKGTQCARIVEK 24 (194)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHH
T ss_pred CcEEEEECCCCCCHHHHHHHHHHH
Confidence 368999999999999999999863
No 68
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Probab=95.48 E-value=0.0034 Score=56.60 Aligned_cols=24 Identities=33% Similarity=0.559 Sum_probs=21.5
Q ss_pred ceEEEEEccCCChHHHHHHHHhhh
Q 039283 211 FSVVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 211 ~~vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
.++|+|.||+|+||||+|+.+.++
T Consensus 3 ~piI~I~GppGSGKgT~ak~La~~ 26 (225)
T d1ckea_ 3 APVITIDGPSGAGKGTLCKAMAEA 26 (225)
T ss_dssp SCEEEEECCTTSSHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHH
Confidence 359999999999999999999874
No 69
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=95.45 E-value=0.0064 Score=52.96 Aligned_cols=23 Identities=30% Similarity=0.476 Sum_probs=20.8
Q ss_pred eEEEEEccCCChHHHHHHHHhhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
++|.|.|++|+||||+++.+...
T Consensus 2 kiivi~G~~GsGKTT~~~~La~~ 24 (194)
T d1nksa_ 2 KIGIVTGIPGVGKSTVLAKVKEI 24 (194)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHH
Confidence 68899999999999999999764
No 70
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.43 E-value=0.024 Score=52.76 Aligned_cols=82 Identities=12% Similarity=0.116 Sum_probs=49.0
Q ss_pred CCceEEEEEccCCChHHHHHHHHhhhhhhhccCC-ceEEEEeCCCCCHHHHHHHHHHHhhcC------CCCCcccHHHHH
Q 039283 209 DGFSVVSIKGLGGVGKTTLAQLVNKDDRVQRHFQ-IKAWTCVSEDFDVFTVSKSILNSIASD------QCTDKDDLNLLQ 281 (600)
Q Consensus 209 ~~~~vv~I~G~~GiGKTtLA~~v~~~~~~~~~F~-~~~wv~vs~~~~~~~~l~~il~~l~~~------~~~~~~~~~~l~ 281 (600)
..+-+|+|.|..|+|||||+..+........... .++-++...-+-..+-...+.+..... ..+...+.+.+.
T Consensus 25 ~~P~iIGi~G~qGSGKSTl~~~l~~~L~~~~~~~~~v~~iS~DdfY~t~~~r~~L~~~~~~~pl~~~RG~PgThD~~ll~ 104 (286)
T d1odfa_ 25 KCPLFIFFSGPQGSGKSFTSIQIYNHLMEKYGGEKSIGYASIDDFYLTHEDQLKLNEQFKNNKLLQGRGLPGTHDMKLLQ 104 (286)
T ss_dssp CSCEEEEEECCTTSSHHHHHHHHHHHHHHHHGGGSCEEEEEGGGGBCCHHHHHHHHHHTTTCGGGSSSCSTTSBCHHHHH
T ss_pred CCCEEEEeECCCCCCHHHHHHHHHHHHHHHhCCCcceEeeccCCCCCCHHHHHHHhhhccccccceecCCCcchhHHHHH
Confidence 4567899999999999999988876432222222 344555544333333334444443211 112677888888
Q ss_pred HHHHHHhCC
Q 039283 282 EKLKKQLSG 290 (600)
Q Consensus 282 ~~l~~~L~~ 290 (600)
+.+....++
T Consensus 105 ~~l~~l~~~ 113 (286)
T d1odfa_ 105 EVLNTIFNN 113 (286)
T ss_dssp HHHHHHTC-
T ss_pred HHHHHHHhh
Confidence 888877665
No 71
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=95.42 E-value=0.0063 Score=54.37 Aligned_cols=26 Identities=27% Similarity=0.333 Sum_probs=22.6
Q ss_pred CCceEEEEEccCCChHHHHHHHHhhh
Q 039283 209 DGFSVVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 209 ~~~~vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
.+..+|.++|++|+||||||+.+...
T Consensus 22 ~kg~vIwltGlsGsGKTTia~~L~~~ 47 (208)
T d1m7ga_ 22 QRGLTIWLTGLSASGKSTLAVELEHQ 47 (208)
T ss_dssp SSCEEEEEECSTTSSHHHHHHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHH
Confidence 35579999999999999999998763
No 72
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]}
Probab=95.40 E-value=0.0086 Score=57.35 Aligned_cols=66 Identities=9% Similarity=-0.047 Sum_probs=33.8
Q ss_pred HHHHHHHhcCCCCCCCCceEEEEEccCCChHHHHHHHHhhhhhhhccCCceEEEEeCCCCCHHHHHHHHH
Q 039283 194 EAIVELLLRDDLRADDGFSVVSIKGLGGVGKTTLAQLVNKDDRVQRHFQIKAWTCVSEDFDVFTVSKSIL 263 (600)
Q Consensus 194 ~~l~~~L~~~~~~~~~~~~vv~I~G~~GiGKTtLA~~v~~~~~~~~~F~~~~wv~vs~~~~~~~~l~~il 263 (600)
.++.+.+... .++..+|+|+|++|+|||||...+........+=-.++=++.+.+++-..++.+-.
T Consensus 41 ~~ll~~~~~~----~~~~~~IgitG~pGaGKSTLi~~l~~~~~~~g~~vavlavDpss~~~ggailgdr~ 106 (327)
T d2p67a1 41 TQLLDAIMPY----CGNTLRLGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSSPVTGGSILGDKT 106 (327)
T ss_dssp HHHHHHHGGG----CSCSEEEEEEECTTSCHHHHHHHHHHHHHHTTCCEEEEEECCC-------------
T ss_pred HHHHHHhhhc----cCCceEEEeeCCCCCCHHHHHHHHHHHHHhcCCceeeecCCCceeeeccccccchh
Confidence 3455555432 25688999999999999999998876543332211233344455555444544433
No 73
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]}
Probab=95.38 E-value=0.0083 Score=57.38 Aligned_cols=39 Identities=23% Similarity=0.301 Sum_probs=29.1
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEccCCChHHHHHHHHhhhh
Q 039283 193 KEAIVELLLRDDLRADDGFSVVSIKGLGGVGKTTLAQLVNKDD 235 (600)
Q Consensus 193 ~~~l~~~L~~~~~~~~~~~~vv~I~G~~GiGKTtLA~~v~~~~ 235 (600)
..+|.+.+... .++..+|+|+|++|+|||||...+....
T Consensus 37 ~~~~~~~~~~~----~~~~~~igitG~pGaGKSTli~~l~~~~ 75 (323)
T d2qm8a1 37 VRDLIDAVLPQ----TGRAIRVGITGVPGVGKSTTIDALGSLL 75 (323)
T ss_dssp HHHHHHHHGGG----CCCSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred HHHHHHHhhhc----cCCceEEeeeCCCCCCHHHHHHHHHHHH
Confidence 44455555433 2567899999999999999999888643
No 74
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.29 E-value=0.0047 Score=55.38 Aligned_cols=24 Identities=13% Similarity=0.192 Sum_probs=21.2
Q ss_pred ceEEEEEccCCChHHHHHHHHhhh
Q 039283 211 FSVVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 211 ~~vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
+-+|+|.|..|+||||+|+.+...
T Consensus 2 P~iIgI~G~~gSGKSTla~~L~~~ 25 (213)
T d1uj2a_ 2 PFLIGVSGGTASGKSSVCAKIVQL 25 (213)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHH
Confidence 468999999999999999988764
No 75
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1 ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=95.20 E-value=0.032 Score=51.43 Aligned_cols=64 Identities=20% Similarity=0.216 Sum_probs=42.3
Q ss_pred HHHHHHhcCCCCCCCCceEEEEEccCCChHHHHHHHHhhhhhhhccCCceEEEEeCCCC-CHHHHHHHHHH
Q 039283 195 AIVELLLRDDLRADDGFSVVSIKGLGGVGKTTLAQLVNKDDRVQRHFQIKAWTCVSEDF-DVFTVSKSILN 264 (600)
Q Consensus 195 ~l~~~L~~~~~~~~~~~~vv~I~G~~GiGKTtLA~~v~~~~~~~~~F~~~~wv~vs~~~-~~~~~l~~il~ 264 (600)
+.++.|..-. .-+-++|.|.+|+|||+|+..+.++. .+.+=+..+++-+++.. ...++..++.+
T Consensus 57 raID~l~pig-----kGQr~~If~~~g~GKt~l~~~i~~~~-~~~~~~v~V~~~iGer~~ev~~~~~~~~~ 121 (276)
T d2jdid3 57 KVVDLLAPYA-----KGGKIGLFGGAGVGKTVLIMELINNV-AKAHGGYSVFAGVGERTREGNDLYHEMIE 121 (276)
T ss_dssp HHHHHHSCEE-----TTCEEEEEECTTSSHHHHHHHHHHHH-TTTCSSEEEEEEESCCHHHHHHHHHHHHH
T ss_pred eeeeeecccc-----CCCEEEeeCCCCCCHHHHHHHHHHHH-HhhCCCeEEEEEeccChHHHHHHHHHHHh
Confidence 3566664432 33569999999999999998887642 22333466788887664 34555566655
No 76
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}
Probab=95.20 E-value=0.0041 Score=54.63 Aligned_cols=23 Identities=30% Similarity=0.377 Sum_probs=19.9
Q ss_pred eEEEEEccCCChHHHHHHHHhhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
..|.|.|++|+||||+|+.+.+.
T Consensus 4 m~I~i~GppGsGKsT~a~~La~~ 26 (189)
T d1zaka1 4 LKVMISGAPASGKGTQCELIKTK 26 (189)
T ss_dssp CCEEEEESTTSSHHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHH
Confidence 45779999999999999988763
No 77
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho, ATPase domain {Escherichia coli [TaxId: 562]}
Probab=95.12 E-value=0.015 Score=54.03 Aligned_cols=47 Identities=17% Similarity=-0.001 Sum_probs=32.7
Q ss_pred HHHHHHhcCCCCCCCCceEEEEEccCCChHHHHHHHHhhhhhhhccCCceEEE
Q 039283 195 AIVELLLRDDLRADDGFSVVSIKGLGGVGKTTLAQLVNKDDRVQRHFQIKAWT 247 (600)
Q Consensus 195 ~l~~~L~~~~~~~~~~~~vv~I~G~~GiGKTtLA~~v~~~~~~~~~F~~~~wv 247 (600)
++++.|..- +.-+-++|.|.+|+|||+|+..+.++... .+-.+++.+
T Consensus 32 r~ID~l~Pi-----grGQr~~I~g~~g~GKT~l~~~i~~~~~~-~~~~~v~~~ 78 (289)
T d1xpua3 32 RVLDLASPI-----GRGQRGLIVAPPKAGKTMLLQNIAQSIAY-NHPDCVLMV 78 (289)
T ss_dssp HHHHHHSCC-----BTTCEEEEEECSSSSHHHHHHHHHHHHHH-HCTTSEEEE
T ss_pred eeeeecccc-----cCCCeeeEeCCCCCCHHHHHHHHHHHHhh-cCCCeEEEE
Confidence 577777644 34468999999999999999999875432 333344443
No 78
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=95.01 E-value=0.0058 Score=53.85 Aligned_cols=24 Identities=21% Similarity=0.270 Sum_probs=21.4
Q ss_pred CceEEEEEccCCChHHHHHHHHhh
Q 039283 210 GFSVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 210 ~~~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
..++|.|.|++|+||||+|+.+..
T Consensus 7 ~~~iI~l~G~pGSGKsT~a~~La~ 30 (194)
T d3adka_ 7 KSKIIFVVGGPGSGKGTQCEKIVQ 30 (194)
T ss_dssp TSCEEEEEECTTSSHHHHHHHHHH
T ss_pred CCcEEEEECCCCCCHHHHHHHHHH
Confidence 347999999999999999998876
No 79
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=94.98 E-value=0.0057 Score=53.11 Aligned_cols=21 Identities=33% Similarity=0.472 Sum_probs=18.9
Q ss_pred EEEEccCCChHHHHHHHHhhh
Q 039283 214 VSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 214 v~I~G~~GiGKTtLA~~v~~~ 234 (600)
|.|.|++|+||||+|+.+...
T Consensus 3 I~i~G~pGSGKsT~a~~La~~ 23 (182)
T d1zina1 3 LVLMGLPGAGKGTQAEKIVAA 23 (182)
T ss_dssp EEEECSTTSSHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHH
Confidence 779999999999999988763
No 80
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=94.94 E-value=0.0061 Score=54.87 Aligned_cols=44 Identities=23% Similarity=0.337 Sum_probs=30.1
Q ss_pred eEEEEEccCCChHHHHHHHHhhhhhhhccCCceEEEEeCCCCCHHHHHHHHHHHhhc
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNKDDRVQRHFQIKAWTCVSEDFDVFTVSKSILNSIAS 268 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~~~~~~~~F~~~~wv~vs~~~~~~~~l~~il~~l~~ 268 (600)
-+|+|-|++|+||||+|+.+..+.. | .++ +.-++++.++.....
T Consensus 4 i~IaIdGp~GsGKgT~ak~La~~lg----~---~~i------stGdl~R~~a~~~~~ 47 (223)
T d1q3ta_ 4 IQIAIDGPASSGKSTVAKIIAKDFG----F---TYL------DTGAMYRAATYMALK 47 (223)
T ss_dssp CEEEEECSSCSSHHHHHHHHHHHHC----C---EEE------EHHHHHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhC----C---cEE------CHHHHHHHHHHHHHH
Confidence 3688999999999999999987432 1 122 355667766654443
No 81
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=94.85 E-value=0.0081 Score=52.71 Aligned_cols=24 Identities=29% Similarity=0.404 Sum_probs=19.6
Q ss_pred CceEEEEEccCCChHHHHHHHHhh
Q 039283 210 GFSVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 210 ~~~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
..-.|.|.|++|+||||+|+.+..
T Consensus 5 r~mrIiliG~PGSGKtT~a~~La~ 28 (189)
T d2ak3a1 5 RLLRAAIMGAPGSGKGTVSSRITK 28 (189)
T ss_dssp CCCEEEEECCTTSSHHHHHHHHHH
T ss_pred cceeEEEECCCCCCHHHHHHHHHH
Confidence 334566779999999999998876
No 82
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=94.84 E-value=0.0067 Score=52.84 Aligned_cols=22 Identities=32% Similarity=0.548 Sum_probs=19.9
Q ss_pred eEEEEEccCCChHHHHHHHHhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
++|.|+|++|+|||||++.+..
T Consensus 3 ~iivl~GpsG~GK~tl~~~L~~ 24 (182)
T d1znwa1 3 RVVVLSGPSAVGKSTVVRCLRE 24 (182)
T ss_dssp CEEEEECSTTSSHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHh
Confidence 5889999999999999998875
No 83
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=94.82 E-value=0.0084 Score=52.53 Aligned_cols=23 Identities=39% Similarity=0.501 Sum_probs=19.4
Q ss_pred CceEEEEEccCCChHHHHHHHHhh
Q 039283 210 GFSVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 210 ~~~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
+.++| |.|++|+||||+|+.+..
T Consensus 3 ~~rii-l~G~pGSGKsT~a~~La~ 25 (190)
T d1ak2a1 3 GVRAV-LLGPPGAGKGTQAPKLAK 25 (190)
T ss_dssp CCEEE-EECCTTSSHHHHHHHHHH
T ss_pred ccEEE-EECCCCCCHHHHHHHHHH
Confidence 45666 689999999999998876
No 84
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=94.80 E-value=0.0067 Score=52.72 Aligned_cols=22 Identities=32% Similarity=0.320 Sum_probs=19.3
Q ss_pred EEEEEccCCChHHHHHHHHhhh
Q 039283 213 VVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
-|+|.|++|+||||+|+.++..
T Consensus 2 ~I~i~G~pGsGKsT~a~~La~~ 23 (181)
T d2cdna1 2 RVLLLGPPGAGKGTQAVKLAEK 23 (181)
T ss_dssp EEEEECCTTSSHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHH
Confidence 3778899999999999999864
No 85
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=94.73 E-value=0.02 Score=53.37 Aligned_cols=37 Identities=32% Similarity=0.535 Sum_probs=28.4
Q ss_pred hHHHHHHHHhcCCCCCCCCceEEEEEccCCChHHHHHHHHhhh
Q 039283 192 DKEAIVELLLRDDLRADDGFSVVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 192 e~~~l~~~L~~~~~~~~~~~~vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
++..+.+.+.. +..++|.++|-||+||||+|-.+...
T Consensus 7 ~~~~~~~~~~~------~~~~iii~sGKGGVGKTT~a~nLA~~ 43 (279)
T d1ihua2 7 SLSALVDDIAR------NEHGLIMLMGKGGVGKTTMAAAIAVR 43 (279)
T ss_dssp CHHHHHHHHHT------TSCEEEEEECSTTSSHHHHHHHHHHH
T ss_pred cHHHHHHHhhc------CCCEEEEEECCCCCCHHHHHHHHHHH
Confidence 45667777643 46789999999999999998766553
No 86
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}
Probab=94.71 E-value=0.0074 Score=52.52 Aligned_cols=22 Identities=32% Similarity=0.460 Sum_probs=19.4
Q ss_pred EEEEEccCCChHHHHHHHHhhh
Q 039283 213 VVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
.|.|.|++|+||||+|+.++..
T Consensus 2 ~I~i~G~pGSGKsT~a~~La~~ 23 (182)
T d1s3ga1 2 NIVLMGLPGAGKGTQADRIVEK 23 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHH
Confidence 3778999999999999999874
No 87
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=94.64 E-value=0.0065 Score=53.42 Aligned_cols=21 Identities=33% Similarity=0.495 Sum_probs=18.8
Q ss_pred EEEEEccCCChHHHHHHHHhh
Q 039283 213 VVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~~ 233 (600)
.|+|+|++|+|||||++.+..
T Consensus 2 pIvl~GPsGsGK~tl~~~L~~ 22 (190)
T d1lvga_ 2 PVVLSGPSGAGKSTLLKKLFQ 22 (190)
T ss_dssp CEEEECCTTSSHHHHHHHHHH
T ss_pred eEEEECCCCCCHHHHHHHHHH
Confidence 377999999999999998876
No 88
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.64 E-value=0.0068 Score=53.06 Aligned_cols=22 Identities=32% Similarity=0.453 Sum_probs=19.4
Q ss_pred eEEEEEccCCChHHHHHHHHhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
+.|+|+|++|+|||||++.+.+
T Consensus 2 rpIvl~GpsG~GK~tl~~~L~~ 23 (186)
T d1gkya_ 2 RPIVISGPSGTGKSTLLKKLFA 23 (186)
T ss_dssp CCEEEECCTTSSHHHHHHHHHH
T ss_pred CeEEEECCCCCCHHHHHHHHHH
Confidence 3478999999999999998876
No 89
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]}
Probab=94.62 E-value=0.009 Score=52.35 Aligned_cols=23 Identities=35% Similarity=0.469 Sum_probs=19.9
Q ss_pred CceEEEEEccCCChHHHHHHHHh
Q 039283 210 GFSVVSIKGLGGVGKTTLAQLVN 232 (600)
Q Consensus 210 ~~~vv~I~G~~GiGKTtLA~~v~ 232 (600)
.+-+|+|+|+.|+||||+|..+-
T Consensus 2 ~p~IIgitG~~gSGKstva~~l~ 24 (191)
T d1uf9a_ 2 HPIIIGITGNIGSGKSTVAALLR 24 (191)
T ss_dssp CCEEEEEEECTTSCHHHHHHHHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHH
Confidence 35689999999999999998763
No 90
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=94.60 E-value=0.019 Score=53.83 Aligned_cols=44 Identities=16% Similarity=0.095 Sum_probs=29.8
Q ss_pred CCceEEEEEccCCChHHHHHHHHhhhhhhhccCCceEEEEeCCCCC
Q 039283 209 DGFSVVSIKGLGGVGKTTLAQLVNKDDRVQRHFQIKAWTCVSEDFD 254 (600)
Q Consensus 209 ~~~~vv~I~G~~GiGKTtLA~~v~~~~~~~~~F~~~~wv~vs~~~~ 254 (600)
+.++++.+.|-||+||||+|..+..... ..=..+.-|+.....+
T Consensus 6 ~~p~~i~~sGKGGVGKTTvaa~lA~~lA--~~G~rVLlvD~Dp~~~ 49 (296)
T d1ihua1 6 NIPPYLFFTGKGGVGKTSISCATAIRLA--EQGKRVLLVSTDPASN 49 (296)
T ss_dssp SCCSEEEEECSTTSSHHHHHHHHHHHHH--HTTCCEEEEECCTTCC
T ss_pred CCCeEEEEECCCcChHHHHHHHHHHHHH--HCCCCEEEEeCCCCCC
Confidence 4568999999999999999977765332 2223455666554433
No 91
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=94.49 E-value=0.0094 Score=52.44 Aligned_cols=25 Identities=36% Similarity=0.271 Sum_probs=21.8
Q ss_pred CCceEEEEEccCCChHHHHHHHHhh
Q 039283 209 DGFSVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 209 ~~~~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
..+-+|+|-|..|+||||+++.+..
T Consensus 7 ~kp~~I~ieG~~GsGKTTl~~~L~~ 31 (197)
T d2vp4a1 7 TQPFTVLIEGNIGSGKTTYLNHFEK 31 (197)
T ss_dssp CCCEEEEEECSTTSCHHHHHHTTGG
T ss_pred CCceEEEEECCCCCCHHHHHHHHHH
Confidence 4566899999999999999988765
No 92
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.26 E-value=0.011 Score=51.35 Aligned_cols=21 Identities=29% Similarity=0.365 Sum_probs=18.0
Q ss_pred EEEEccCCChHHHHHHHHhhh
Q 039283 214 VSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 214 v~I~G~~GiGKTtLA~~v~~~ 234 (600)
|.|.|++|+||||+|+.+...
T Consensus 5 Ivl~G~pGSGKtT~a~~La~~ 25 (180)
T d1akya1 5 MVLIGPPGAGKGTQAPNLQER 25 (180)
T ss_dssp EEEECCTTSSHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHH
Confidence 457799999999999999763
No 93
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]}
Probab=94.25 E-value=0.01 Score=51.30 Aligned_cols=22 Identities=27% Similarity=0.303 Sum_probs=19.0
Q ss_pred EEEEEccCCChHHHHHHHHhhh
Q 039283 213 VVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
.|.|.|++|+||||+|+.+...
T Consensus 2 ~I~i~G~pGSGKsT~~~~La~~ 23 (179)
T d1e4va1 2 RIILLGAPVAGKGTQAQFIMEK 23 (179)
T ss_dssp EEEEEESTTSSHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHH
Confidence 3678999999999999998763
No 94
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.24 E-value=0.011 Score=51.19 Aligned_cols=22 Identities=18% Similarity=0.385 Sum_probs=19.9
Q ss_pred eEEEEEccCCChHHHHHHHHhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
+.|.|+||+|+|||||++.+..
T Consensus 4 k~ivl~Gpsg~GK~tl~~~L~~ 25 (178)
T d1kgda_ 4 KTLVLLGAHGVGRRHIKNTLIT 25 (178)
T ss_dssp CEEEEECCTTSSHHHHHHHHHH
T ss_pred CcEEEECCCCCCHHHHHHHHHH
Confidence 5789999999999999998875
No 95
>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]}
Probab=94.17 E-value=0.023 Score=55.01 Aligned_cols=63 Identities=17% Similarity=0.075 Sum_probs=36.4
Q ss_pred cchHHHHHHHHhcCCCCCCCCceEEEEEccCCChHHHHHHHHhhhh-hhhccCCceEEEEeCCCCCHHHHHHH
Q 039283 190 EKDKEAIVELLLRDDLRADDGFSVVSIKGLGGVGKTTLAQLVNKDD-RVQRHFQIKAWTCVSEDFDVFTVSKS 261 (600)
Q Consensus 190 ~~e~~~l~~~L~~~~~~~~~~~~vv~I~G~~GiGKTtLA~~v~~~~-~~~~~F~~~~wv~vs~~~~~~~~l~~ 261 (600)
+.....+...+. .+++.|+|++|.||||++..+.... +....-...+.+.....-....+...
T Consensus 151 ~~Q~~A~~~al~---------~~~~vI~G~pGTGKTt~i~~~l~~l~~~~~~~~~~I~l~ApTgkAA~~L~e~ 214 (359)
T d1w36d1 151 NWQKVAAAVALT---------RRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTES 214 (359)
T ss_dssp CHHHHHHHHHHT---------BSEEEEECCTTSTHHHHHHHHHHHHHHTCSSCCCCEEEEBSSHHHHHHHHHH
T ss_pred cHHHHHHHHHHc---------CCeEEEEcCCCCCceehHHHHHHHHHHHHhccCCeEEEecCcHHHHHHHHHH
Confidence 445556666652 2589999999999999886654422 11112234566666544333333333
No 96
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]}
Probab=94.11 E-value=0.0087 Score=57.69 Aligned_cols=45 Identities=24% Similarity=0.289 Sum_probs=31.8
Q ss_pred CCccccccchHHHHHHHHhcCCCCCCCCceEEEEEccCCChHHHHHHHHhh
Q 039283 183 EDEVYGREKDKEAIVELLLRDDLRADDGFSVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 183 ~~~~vGR~~e~~~l~~~L~~~~~~~~~~~~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
-+.++|.+.-+..|.-.+... +..-|.|.|++|+|||+||+.+..
T Consensus 6 f~~I~Gq~~~kral~laa~~~------~~h~vLl~G~pG~GKT~lar~~~~ 50 (333)
T d1g8pa_ 6 FSAIVGQEDMKLALLLTAVDP------GIGGVLVFGDRGTGKSTAVRALAA 50 (333)
T ss_dssp GGGSCSCHHHHHHHHHHHHCG------GGCCEEEECCGGGCTTHHHHHHHH
T ss_pred hhhccCcHHHHHHHHHHHhcc------CCCeEEEECCCCccHHHHHHHHHH
Confidence 346899987666554333211 123689999999999999998853
No 97
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.10 E-value=0.023 Score=51.50 Aligned_cols=49 Identities=12% Similarity=0.040 Sum_probs=33.8
Q ss_pred CCceEEEEEccCCChHHHHHHHHhhhhhhhc----cCCceEEEEeCCCCCHHH
Q 039283 209 DGFSVVSIKGLGGVGKTTLAQLVNKDDRVQR----HFQIKAWTCVSEDFDVFT 257 (600)
Q Consensus 209 ~~~~vv~I~G~~GiGKTtLA~~v~~~~~~~~----~F~~~~wv~vs~~~~~~~ 257 (600)
+.-+++.|+|++|+|||+||.++..+..... .-...+|++....++...
T Consensus 32 ~~G~~~li~G~pGsGKT~l~lq~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 84 (251)
T d1szpa2 32 ETGSITELFGEFRTGKSQLCHTLAVTCQIPLDIGGGEGKCLYIDTEGTFRPVR 84 (251)
T ss_dssp ESSSEEEEEESTTSSHHHHHHHHTTTTTSCTTTTCCSCEEEEEESSSCCCGGG
T ss_pred cCCeEEEEEcCCCCCHHHHHHHHHHHhhhhhhhccCCceEEEEeecchHHHHH
Confidence 3457999999999999999988865432211 123567888776665433
No 98
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=94.04 E-value=0.046 Score=49.63 Aligned_cols=50 Identities=18% Similarity=0.183 Sum_probs=34.6
Q ss_pred CCceEEEEEccCCChHHHHHHHHhhhhhhh----ccCCceEEEEeCCCCCHHHH
Q 039283 209 DGFSVVSIKGLGGVGKTTLAQLVNKDDRVQ----RHFQIKAWTCVSEDFDVFTV 258 (600)
Q Consensus 209 ~~~~vv~I~G~~GiGKTtLA~~v~~~~~~~----~~F~~~~wv~vs~~~~~~~~ 258 (600)
+.-+++.|+|++|+|||++|.++..+.... ......+|+......+...+
T Consensus 34 p~G~~~li~G~pGsGKT~~~lq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (254)
T d1pzna2 34 ETQAITEVFGEFGSGKTQLAHTLAVMVQLPPEEGGLNGSVIWIDTENTFRPERI 87 (254)
T ss_dssp ESSEEEEEEESTTSSHHHHHHHHHHHTTSCGGGTSCSCEEEEEESSSCCCHHHH
T ss_pred cCCEEEEEEcCCCCCHHHHHHHHHHHhhchHHhcCCCceEEEEeccchhHHHHH
Confidence 455799999999999999998887643211 12345678877766665433
No 99
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]}
Probab=93.71 E-value=0.016 Score=52.65 Aligned_cols=22 Identities=36% Similarity=0.489 Sum_probs=20.0
Q ss_pred EEEEEccCCChHHHHHHHHhhh
Q 039283 213 VVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
||+|+|+.|+|||||...+.++
T Consensus 2 vi~v~G~~GsGKTTLl~~ll~~ 23 (244)
T d1yrba1 2 IVVFVGTAGSGKTTLTGEFGRY 23 (244)
T ss_dssp EEEEECSTTSSHHHHHHHHHHH
T ss_pred EEEEEcCCCCcHHHHHHHHHHH
Confidence 7899999999999999998764
No 100
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]}
Probab=93.67 E-value=0.016 Score=51.38 Aligned_cols=22 Identities=27% Similarity=0.431 Sum_probs=19.9
Q ss_pred eEEEEEccCCChHHHHHHHHhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
.++.|+||+|+|||||.+.+..
T Consensus 3 ~livi~GPSG~GK~tl~~~L~~ 24 (205)
T d1s96a_ 3 TLYIVSAPSGAGKSSLIQALLK 24 (205)
T ss_dssp CEEEEECCTTSCHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHh
Confidence 5789999999999999988875
No 101
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.60 E-value=0.16 Score=44.71 Aligned_cols=23 Identities=17% Similarity=0.433 Sum_probs=20.7
Q ss_pred eEEEEEccCCChHHHHHHHHhhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
..|+|.|+.|+||||+++.+.+.
T Consensus 4 ~lI~ieG~dGsGKsT~~~~L~~~ 26 (209)
T d1nn5a_ 4 ALIVLEGVDRAGKSTQSRKLVEA 26 (209)
T ss_dssp CEEEEEESTTSSHHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHH
Confidence 57899999999999999998874
No 102
>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}
Probab=93.60 E-value=0.037 Score=51.11 Aligned_cols=37 Identities=24% Similarity=0.221 Sum_probs=25.7
Q ss_pred eEEEEEccCCChHHHHHHHHhhhhhhhccCCceEEEEeC
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNKDDRVQRHFQIKAWTCVS 250 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~~~~~~~~F~~~~wv~vs 250 (600)
+.|+|+|-||+||||+|-.+..... ..-..+.-|++.
T Consensus 2 r~Iai~gKGGvGKTT~a~nLA~~LA--~~G~rVllID~D 38 (269)
T d1cp2a_ 2 RQVAIYGKGGIGKSTTTQNLTSGLH--AMGKTIMVVGCD 38 (269)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHHH--TTTCCEEEEEEC
T ss_pred CEEEEECCCcCCHHHHHHHHHHHHH--hCCCcEEEEecC
Confidence 6789999999999999977766432 222244555553
No 103
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]}
Probab=93.59 E-value=0.017 Score=48.43 Aligned_cols=21 Identities=29% Similarity=0.419 Sum_probs=18.7
Q ss_pred EEEEccCCChHHHHHHHHhhh
Q 039283 214 VSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 214 v~I~G~~GiGKTtLA~~v~~~ 234 (600)
|.|+|++|+|||||...+..+
T Consensus 3 ivlvG~~~vGKSsLi~~l~~~ 23 (160)
T d1r8sa_ 3 ILMVGLDAAGKTTILYKLKLG 23 (160)
T ss_dssp EEEECSTTSSHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHhcC
Confidence 679999999999999988754
No 104
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.45 E-value=0.021 Score=51.92 Aligned_cols=25 Identities=40% Similarity=0.530 Sum_probs=22.1
Q ss_pred CceEEEEEccCCChHHHHHHHHhhh
Q 039283 210 GFSVVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 210 ~~~vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
+++.|+|-|+-|+||||+++.+...
T Consensus 1 ~pk~IviEG~~GsGKST~~~~L~~~ 25 (241)
T d2ocpa1 1 GPRRLSIEGNIAVGKSTFVKLLTKT 25 (241)
T ss_dssp CCEEEEEEECTTSSHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCcHHHHHHHHHHH
Confidence 3579999999999999999998764
No 105
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]}
Probab=93.31 E-value=0.032 Score=54.05 Aligned_cols=26 Identities=31% Similarity=0.102 Sum_probs=22.9
Q ss_pred CCceEEEEEccCCChHHHHHHHHhhh
Q 039283 209 DGFSVVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 209 ~~~~vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
+..+.+.++||+|+|||++|..+++.
T Consensus 152 ~~~~~~~~~g~~~~gk~~~~~~~~~~ 177 (362)
T d1svma_ 152 PKKRYWLFKGPIDSGKTTLAAALLEL 177 (362)
T ss_dssp TTCCEEEEECSTTSSHHHHHHHHHHH
T ss_pred CCcCeEEEECCCCCCHHHHHHHHHHH
Confidence 45679999999999999999999873
No 106
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]}
Probab=93.19 E-value=0.026 Score=49.42 Aligned_cols=26 Identities=19% Similarity=0.482 Sum_probs=22.5
Q ss_pred CCCceEEEEEccCCChHHHHHHHHhh
Q 039283 208 DDGFSVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 208 ~~~~~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
.++.+.|+|+|.+|+|||||...+..
T Consensus 20 ~~~~~~I~lvG~~n~GKSTLin~L~g 45 (195)
T d1svia_ 20 EGGLPEIALAGRSNVGKSSFINSLIN 45 (195)
T ss_dssp CSCCCEEEEEEBTTSSHHHHHHHHHT
T ss_pred CCCCCEEEEECCCCCCHHHHHHHhcC
Confidence 34567899999999999999999975
No 107
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]}
Probab=93.17 E-value=0.13 Score=47.40 Aligned_cols=54 Identities=11% Similarity=0.069 Sum_probs=36.0
Q ss_pred eEEEEEccCCChHHHHHHHHhhhhhhhccCCceEEEEeCCCCCHHHHHHHHHHHhhc
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNKDDRVQRHFQIKAWTCVSEDFDVFTVSKSILNSIAS 268 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~~~~~~~~F~~~~wv~vs~~~~~~~~l~~il~~l~~ 268 (600)
.++.|.|.+|+|||+++..+..+......+ .+++++.. .+..++...++.....
T Consensus 36 ~l~vi~G~~G~GKT~~~~~la~~~a~~~g~-~v~~~s~E--~~~~~~~~r~~~~~~~ 89 (277)
T d1cr2a_ 36 EVIMVTSGSGMGKSTFVRQQALQWGTAMGK-KVGLAMLE--ESVEETAEDLIGLHNR 89 (277)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHHHHTSCC-CEEEEESS--SCHHHHHHHHHHHHTT
T ss_pred eEEEEEeCCCCCHHHHHHHHHHhhhhhccc-ceeEeeec--cchhhHHhHHHHHhhc
Confidence 588999999999999998887543222223 34455543 4567777777665543
No 108
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]}
Probab=93.12 E-value=0.018 Score=50.85 Aligned_cols=22 Identities=41% Similarity=0.705 Sum_probs=20.3
Q ss_pred eEEEEEccCCChHHHHHHHHhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
.+++|+|+.|+|||||.+.++.
T Consensus 28 ei~~l~G~NGsGKSTLl~~i~g 49 (200)
T d1sgwa_ 28 NVVNFHGPNGIGKTTLLKTIST 49 (200)
T ss_dssp CCEEEECCTTSSHHHHHHHHTT
T ss_pred CEEEEECCCCChHHHHHHHHhc
Confidence 5899999999999999999875
No 109
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.09 E-value=0.1 Score=47.08 Aligned_cols=47 Identities=13% Similarity=0.051 Sum_probs=33.9
Q ss_pred CCceEEEEEccCCChHHHHHHHHhhhhh----hhccCCceEEEEeCCCCCH
Q 039283 209 DGFSVVSIKGLGGVGKTTLAQLVNKDDR----VQRHFQIKAWTCVSEDFDV 255 (600)
Q Consensus 209 ~~~~vv~I~G~~GiGKTtLA~~v~~~~~----~~~~F~~~~wv~vs~~~~~ 255 (600)
+.-+++.|+|++|+|||++|.++..+.. ....+..+.|+.....+..
T Consensus 35 p~G~~~~i~G~~GsGKT~lalq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (258)
T d1v5wa_ 35 ESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRP 85 (258)
T ss_dssp CSSEEEEEECCTTCTHHHHHHHHHHHTTSCBTTTBCCCEEEEEESSSCCCH
T ss_pred cCCEEEEEECCCCCCHHHHHHHHHHHHHhhhhcccccceEEEechHHHHHH
Confidence 4557999999999999999988875322 2233456778877666553
No 110
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=93.07 E-value=0.015 Score=54.23 Aligned_cols=80 Identities=11% Similarity=0.125 Sum_probs=40.0
Q ss_pred CceEEEEEccCCChHHHHHHHHhhhhhhhccCCceEEEEeCCC--CCHHHHHHHHHHHh--h-cC---CCCCcccHHHHH
Q 039283 210 GFSVVSIKGLGGVGKTTLAQLVNKDDRVQRHFQIKAWTCVSED--FDVFTVSKSILNSI--A-SD---QCTDKDDLNLLQ 281 (600)
Q Consensus 210 ~~~vv~I~G~~GiGKTtLA~~v~~~~~~~~~F~~~~wv~vs~~--~~~~~~l~~il~~l--~-~~---~~~~~~~~~~l~ 281 (600)
+.++|+|.|.+|+||||+++.+.+..... .. ..+.++...- ++-.+.-..+...- . .. ......+.+.+.
T Consensus 3 k~pIIgIaG~SGSGKTTva~~l~~i~~~~-~v-~~~iI~~Dsfyr~~R~~~~~~~~~~~~~~~~~~~~~~P~A~d~dlL~ 80 (288)
T d1a7ja_ 3 KHPIISVTGSSGAGTSTVKHTFDQIFRRE-GV-KAVSIEGDAFHRFNRADMKAELDRRYAAGDATFSHFSYEANELKELE 80 (288)
T ss_dssp TSCEEEEESCC---CCTHHHHHHHHHHHH-TC-CEEEEEGGGGBSCCHHHHHHHHHHHHHHTCTTCSTTSGGGBCHHHHH
T ss_pred CCCEEEEECCCCCcHHHHHHHHHHHHhhc-CC-CeEEEeCCCCCccchhhhhhhhhhhhhhhccCCCCCCcccccHHHHH
Confidence 45699999999999999998886632211 11 1233433322 22222222222211 1 11 011456777777
Q ss_pred HHHHHHhCCC
Q 039283 282 EKLKKQLSGK 291 (600)
Q Consensus 282 ~~l~~~L~~k 291 (600)
+.++.+.+++
T Consensus 81 ~~l~~L~~g~ 90 (288)
T d1a7ja_ 81 RVFREYGETG 90 (288)
T ss_dssp HHHHHHHHHS
T ss_pred HHHHHHHCCC
Confidence 7777766554
No 111
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1 [TaxId: 9606]}
Probab=93.01 E-value=0.023 Score=47.99 Aligned_cols=22 Identities=36% Similarity=0.481 Sum_probs=19.3
Q ss_pred EEEEEccCCChHHHHHHHHhhh
Q 039283 213 VVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
-|+|+|.+|+|||||.+.+..+
T Consensus 7 kI~ivG~~~vGKSSLi~~~~~~ 28 (169)
T d1upta_ 7 RILILGLDGAGKTTILYRLQVG 28 (169)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 3789999999999999988764
No 112
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=92.94 E-value=0.025 Score=51.24 Aligned_cols=22 Identities=27% Similarity=0.462 Sum_probs=20.1
Q ss_pred eEEEEEccCCChHHHHHHHHhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
.+++|.|+.|+|||||++.++.
T Consensus 30 e~~~liG~sGaGKSTll~~i~g 51 (240)
T d1g2912 30 EFMILLGPSGCGKTTTLRMIAG 51 (240)
T ss_dssp CEEEEECSTTSSHHHHHHHHHT
T ss_pred CEEEEECCCCChHHHHHHHHhc
Confidence 5899999999999999998865
No 113
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=92.92 E-value=0.023 Score=51.39 Aligned_cols=22 Identities=36% Similarity=0.579 Sum_probs=20.2
Q ss_pred eEEEEEccCCChHHHHHHHHhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
.+++|.|+.|+|||||++.+.-
T Consensus 32 e~~~iiG~sGsGKSTLl~~i~G 53 (240)
T d3dhwc1 32 QIYGVIGASGAGKSTLIRCVNL 53 (240)
T ss_dssp CEEEEEESTTSSHHHHHHHHTT
T ss_pred CEEEEECCCCCCHHHHHHHHcC
Confidence 5999999999999999998875
No 114
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=92.91 E-value=0.15 Score=41.22 Aligned_cols=50 Identities=14% Similarity=0.108 Sum_probs=30.2
Q ss_pred CCceEEEEEccCCChHHHHHHHHhhhhhhhccCCceEEEEeCCCCCHHHHHHHHHH
Q 039283 209 DGFSVVSIKGLGGVGKTTLAQLVNKDDRVQRHFQIKAWTCVSEDFDVFTVSKSILN 264 (600)
Q Consensus 209 ~~~~vv~I~G~~GiGKTtLA~~v~~~~~~~~~F~~~~wv~vs~~~~~~~~l~~il~ 264 (600)
++.++..|+++.|.|||+++-.++. .....+.+.+....-..+....+.+
T Consensus 6 ~~~~~~ll~apTGsGKT~~~~~~~~------~~~~~vli~~P~~~l~~q~~~~~~~ 55 (136)
T d1a1va1 6 QSFQVAHLHAPTGSGKSTKVPAAYA------AQGYKVLVLNPSVAATLGFGAYMSK 55 (136)
T ss_dssp SSCEEEEEECCTTSCTTTHHHHHHH------TTTCCEEEEESCHHHHHHHHHHHHH
T ss_pred cCCCEEEEEeCCCCCHHHHHHHHHH------HcCCcEEEEcChHHHHHHHHHHHHH
Confidence 3568899999999999998855443 2233555555443333333333333
No 115
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]}
Probab=92.80 E-value=0.025 Score=51.32 Aligned_cols=22 Identities=41% Similarity=0.761 Sum_probs=20.1
Q ss_pred eEEEEEccCCChHHHHHHHHhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
..++|+|+.|.|||||++.+..
T Consensus 30 e~vaIvG~sGsGKSTLl~ll~g 51 (241)
T d2pmka1 30 EVIGIVGRSGSGKSTLTKLIQR 51 (241)
T ss_dssp CEEEEECSTTSSHHHHHHHHTT
T ss_pred CEEEEECCCCCCHHHHHHHHHh
Confidence 5899999999999999998865
No 116
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=92.78 E-value=0.027 Score=51.59 Aligned_cols=22 Identities=36% Similarity=0.691 Sum_probs=20.1
Q ss_pred eEEEEEccCCChHHHHHHHHhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
.+++|+|+.|+|||||++.+..
T Consensus 42 e~iaivG~sGsGKSTLl~ll~g 63 (253)
T d3b60a1 42 KTVALVGRSGSGKSTIASLITR 63 (253)
T ss_dssp CEEEEEECTTSSHHHHHHHHTT
T ss_pred CEEEEECCCCChHHHHHHHHhc
Confidence 5899999999999999998864
No 117
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.77 E-value=0.023 Score=50.38 Aligned_cols=26 Identities=19% Similarity=0.106 Sum_probs=22.1
Q ss_pred CceEEEEEccCCChHHHHHHHHhhhh
Q 039283 210 GFSVVSIKGLGGVGKTTLAQLVNKDD 235 (600)
Q Consensus 210 ~~~vv~I~G~~GiGKTtLA~~v~~~~ 235 (600)
.-.++.|.|++|+|||+||.++..+.
T Consensus 22 ~G~v~~i~G~~GsGKT~l~l~la~~~ 47 (242)
T d1n0wa_ 22 TGSITEMFGEFRTGKTQICHTLAVTC 47 (242)
T ss_dssp TTSEEEEECCTTSSHHHHHHHHHHHT
T ss_pred CCEEEEEEeCCCCCHHHHHHHHHHHH
Confidence 44699999999999999998887643
No 118
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Probab=92.75 E-value=0.031 Score=50.81 Aligned_cols=23 Identities=30% Similarity=0.564 Sum_probs=20.6
Q ss_pred ceEEEEEccCCChHHHHHHHHhh
Q 039283 211 FSVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 211 ~~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
-..++|+|+.|+|||||++.+..
T Consensus 28 Ge~vaivG~sGsGKSTLl~ll~g 50 (242)
T d1mv5a_ 28 NSIIAFAGPSGGGKSTIFSLLER 50 (242)
T ss_dssp TEEEEEECCTTSSHHHHHHHHTT
T ss_pred CCEEEEECCCCCCHHHHHHHHHH
Confidence 36999999999999999998854
No 119
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId: 562]}
Probab=92.70 E-value=0.15 Score=44.90 Aligned_cols=24 Identities=38% Similarity=0.511 Sum_probs=20.9
Q ss_pred eEEEEEccCCChHHHHHHHHhhhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNKDD 235 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~~~ 235 (600)
+.|+|-|+.|+||||+++.+....
T Consensus 3 kfIviEG~dGsGKsT~~~~L~~~L 26 (210)
T d4tmka_ 3 KYIVIEGLEGAGKTTARNVVVETL 26 (210)
T ss_dssp CEEEEEECTTSCHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHH
Confidence 578999999999999999987643
No 120
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.69 E-value=0.027 Score=48.26 Aligned_cols=21 Identities=33% Similarity=0.359 Sum_probs=18.6
Q ss_pred EEEEccCCChHHHHHHHHhhh
Q 039283 214 VSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 214 v~I~G~~GiGKTtLA~~v~~~ 234 (600)
|.|+|.+|+|||+|+..+.++
T Consensus 6 ivvvG~~~vGKTsli~r~~~~ 26 (173)
T d2a5ja1 6 YIIIGDTGVGKSCLLLQFTDK 26 (173)
T ss_dssp EEEESSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHhcC
Confidence 678999999999999988754
No 121
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.63 E-value=0.021 Score=51.69 Aligned_cols=24 Identities=25% Similarity=0.405 Sum_probs=21.1
Q ss_pred ceEEEEEccCCChHHHHHHHHhhh
Q 039283 211 FSVVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 211 ~~vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
.+.|+|-|+.|+||||+++.+...
T Consensus 2 ~k~I~ieG~dGsGKST~~~~L~~~ 25 (241)
T d1p5zb_ 2 IKKISIEGNIAAGKSTFVNILKQL 25 (241)
T ss_dssp CEEEEEECSTTSSHHHHHTTTGGG
T ss_pred CCEEEEECCCCCCHHHHHHHHHHH
Confidence 478999999999999999887763
No 122
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.62 E-value=0.028 Score=47.76 Aligned_cols=22 Identities=32% Similarity=0.333 Sum_probs=18.9
Q ss_pred EEEEEccCCChHHHHHHHHhhh
Q 039283 213 VVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
-|+|+|.+|+|||+|+..+.++
T Consensus 6 KivlvG~~~vGKTsli~~~~~~ 27 (166)
T d1z0fa1 6 KYIIIGDMGVGKSCLLHQFTEK 27 (166)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 3778999999999999888753
No 123
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.58 E-value=0.031 Score=51.13 Aligned_cols=23 Identities=35% Similarity=0.523 Sum_probs=20.6
Q ss_pred ceEEEEEccCCChHHHHHHHHhh
Q 039283 211 FSVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 211 ~~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
-..++|+|+.|+|||||++.+..
T Consensus 40 Ge~vaivG~sGsGKSTLl~li~g 62 (251)
T d1jj7a_ 40 GEVTALVGPNGSGKSTVAALLQN 62 (251)
T ss_dssp TCEEEEECSTTSSHHHHHHHHTT
T ss_pred CCEEEEECCCCCcHHHHHHHHhc
Confidence 35999999999999999998864
No 124
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=92.56 E-value=0.03 Score=50.59 Aligned_cols=22 Identities=27% Similarity=0.477 Sum_probs=20.1
Q ss_pred eEEEEEccCCChHHHHHHHHhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
.+++|.|+.|+|||||.+.+..
T Consensus 33 e~~~liGpsGaGKSTLl~~i~G 54 (239)
T d1v43a3 33 EFLVLLGPSGCGKTTTLRMIAG 54 (239)
T ss_dssp CEEEEECCTTSSHHHHHHHHHT
T ss_pred CEEEEECCCCChHHHHHHHHHc
Confidence 5899999999999999998865
No 125
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]}
Probab=92.50 E-value=0.029 Score=51.49 Aligned_cols=22 Identities=41% Similarity=0.603 Sum_probs=20.3
Q ss_pred eEEEEEccCCChHHHHHHHHhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
.+++|+|+.|+|||||++.+.-
T Consensus 29 Ei~~iiG~sGsGKSTLl~~i~G 50 (258)
T d1b0ua_ 29 DVISIIGSSGSGKSTFLRCINF 50 (258)
T ss_dssp CEEEEECCTTSSHHHHHHHHTT
T ss_pred CEEEEECCCCCcHHHHHHHHHc
Confidence 5999999999999999998874
No 126
>d2jdia3 c.37.1.11 (A:95-379) Central domain of alpha subunit of F1 ATP synthase {Cow (Bos taurus) [TaxId: 9913]}
Probab=92.49 E-value=0.2 Score=46.19 Aligned_cols=35 Identities=23% Similarity=0.049 Sum_probs=25.6
Q ss_pred HHHHHHhcCCCCCCCCceEEEEEccCCChHHHHHHHHhhh
Q 039283 195 AIVELLLRDDLRADDGFSVVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 195 ~l~~~L~~~~~~~~~~~~vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
+.++.|..- ..-+-++|.|.+|+|||+|+..+...
T Consensus 57 raID~l~pi-----g~GQr~~If~~~g~GKt~ll~~~~~~ 91 (285)
T d2jdia3 57 KAVDSLVPI-----GRGQRELIIGDRQTGKTSIAIDTIIN 91 (285)
T ss_dssp HHHHHHSCC-----BTTCBCEEEESTTSSHHHHHHHHHHH
T ss_pred eEEecccCc-----cCCCEEEeecCCCCChHHHHHHHHHh
Confidence 356666543 23457899999999999999877654
No 127
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=92.46 E-value=0.03 Score=47.37 Aligned_cols=21 Identities=33% Similarity=0.506 Sum_probs=18.4
Q ss_pred EEEEccCCChHHHHHHHHhhh
Q 039283 214 VSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 214 v~I~G~~GiGKTtLA~~v~~~ 234 (600)
|+++|.+|+|||||+..+.+.
T Consensus 5 v~liG~~~vGKSsLi~rl~~~ 25 (164)
T d1z2aa1 5 MVVVGNGAVGKSSMIQRYCKG 25 (164)
T ss_dssp EEEECSTTSSHHHHHHHHHHC
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 679999999999999887753
No 128
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=92.45 E-value=0.03 Score=47.37 Aligned_cols=22 Identities=27% Similarity=0.273 Sum_probs=19.3
Q ss_pred EEEEEccCCChHHHHHHHHhhh
Q 039283 213 VVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
-|.|+|.+|+|||||+..+.++
T Consensus 4 Kv~liG~~~vGKTsLl~~~~~~ 25 (165)
T d1z06a1 4 KIIVIGDSNVGKTCLTYRFCAG 25 (165)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 3789999999999999988764
No 129
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=92.44 E-value=0.032 Score=50.38 Aligned_cols=22 Identities=23% Similarity=0.433 Sum_probs=19.8
Q ss_pred eEEEEEccCCChHHHHHHHHhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
.+++|.|+.|+|||||.+.+..
T Consensus 25 e~~~liGpnGaGKSTll~~i~G 46 (240)
T d2onka1 25 DYCVLLGPTGAGKSVFLELIAG 46 (240)
T ss_dssp SEEEEECCTTSSHHHHHHHHHT
T ss_pred EEEEEECCCCChHHHHHHHHHc
Confidence 3788999999999999998875
No 130
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=92.43 E-value=0.049 Score=54.20 Aligned_cols=50 Identities=28% Similarity=0.389 Sum_probs=34.3
Q ss_pred CccccccchHHHHHHHHhc--------CCCCCCCCceEEEEEccCCChHHHHHHHHhh
Q 039283 184 DEVYGREKDKEAIVELLLR--------DDLRADDGFSVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 184 ~~~vGR~~e~~~l~~~L~~--------~~~~~~~~~~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
..+||.++.++.|--.+.+ ......-..+-|.++||.|+|||-||+.++.
T Consensus 14 ~yVvGQ~~AKk~lsvav~nhyrR~~~~~~~~~ei~ksNILliGPTGvGKTlLAr~LAk 71 (443)
T d1g41a_ 14 QHIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAK 71 (443)
T ss_dssp TTCCSCHHHHHHHHHHHHHHHHHHHSCTTTTTTCCCCCEEEECCTTSSHHHHHHHHHH
T ss_pred CcccCcHHHHHHHHHHHHHHHHHhhcccccccccccccEEEECCCCCCHHHHHHHHHH
Confidence 4578888777766555521 1111122345799999999999999999986
No 131
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=92.30 E-value=0.029 Score=50.29 Aligned_cols=22 Identities=32% Similarity=0.444 Sum_probs=20.2
Q ss_pred eEEEEEccCCChHHHHHHHHhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
.+++|.|+.|+|||||.+.+.-
T Consensus 27 e~~~liGpsGaGKSTll~~l~G 48 (229)
T d3d31a2 27 EYFVILGPTGAGKTLFLELIAG 48 (229)
T ss_dssp CEEEEECCCTHHHHHHHHHHHT
T ss_pred CEEEEECCCCCcHHHHHHHHhc
Confidence 5999999999999999998865
No 132
>d1fx0a3 c.37.1.11 (A:97-372) Central domain of alpha subunit of F1 ATP synthase {Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]}
Probab=92.29 E-value=0.091 Score=48.41 Aligned_cols=40 Identities=20% Similarity=0.112 Sum_probs=27.9
Q ss_pred eEEEEEccCCChHHHHHHHHhhhhhhhccCCceEEEEeCCCC
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNKDDRVQRHFQIKAWTCVSEDF 253 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~~~~~~~~F~~~~wv~vs~~~ 253 (600)
+-++|.|.+|+|||+|+...... ...+-..++++-++...
T Consensus 68 Qr~~Ifg~~g~GKt~l~~~~~~~--~~~~~~v~V~~~iGer~ 107 (276)
T d1fx0a3 68 QRELIIGDRQTGKTAVATDTILN--QQGQNVICVYVAIGQKA 107 (276)
T ss_dssp CBCBEEESSSSSHHHHHHHHHHT--CCTTTCEEEEEEESCCH
T ss_pred ceEeeccCCCCChHHHHHHHHhh--hcccCceeeeeeecchh
Confidence 45889999999999999775442 12333466777777653
No 133
>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]}
Probab=92.29 E-value=0.039 Score=51.64 Aligned_cols=38 Identities=21% Similarity=0.145 Sum_probs=26.0
Q ss_pred eEEEEEccCCChHHHHHHHHhhhhhhhccCCceEEEEeCC
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNKDDRVQRHFQIKAWTCVSE 251 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~~~~~~~~F~~~~wv~vs~ 251 (600)
+.|+|+|-||+||||+|..+..... ..-..+.-|++..
T Consensus 3 r~IaisgKGGVGKTT~a~NLA~~LA--~~G~rVLlID~Dp 40 (289)
T d2afhe1 3 RQCAIYGKGGIGKSTTTQNLVAALA--EMGKKVMIVGCDP 40 (289)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHHH--HTTCCEEEEEECS
T ss_pred cEEEEECCCCCCHHHHHHHHHHHHH--HCCCCEEEEecCC
Confidence 5778899999999999977765332 2222455666643
No 134
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=92.23 E-value=0.041 Score=48.48 Aligned_cols=22 Identities=32% Similarity=0.659 Sum_probs=19.7
Q ss_pred EEEEEccCCChHHHHHHHHhhh
Q 039283 213 VVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
.|+|.|+.|+||||+++.+.+.
T Consensus 2 lI~ieG~dGsGKST~~~~L~~~ 23 (208)
T d1gsia_ 2 LIAIEGVDGAGKRTLVEKLSGA 23 (208)
T ss_dssp EEEEECSTTSSHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHH
Confidence 5889999999999999988763
No 135
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.20 E-value=0.034 Score=47.22 Aligned_cols=22 Identities=36% Similarity=0.521 Sum_probs=19.1
Q ss_pred EEEEEccCCChHHHHHHHHhhh
Q 039283 213 VVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
-|+|+|.+|+|||+|+..+.++
T Consensus 5 Ki~lvG~~~vGKTsLi~r~~~~ 26 (167)
T d1kaoa_ 5 KVVVLGSGGVGKSALTVQFVTG 26 (167)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 4789999999999999888764
No 136
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=92.19 E-value=0.081 Score=47.63 Aligned_cols=26 Identities=27% Similarity=0.267 Sum_probs=22.4
Q ss_pred CceEEEEEccCCChHHHHHHHHhhhh
Q 039283 210 GFSVVSIKGLGGVGKTTLAQLVNKDD 235 (600)
Q Consensus 210 ~~~vv~I~G~~GiGKTtLA~~v~~~~ 235 (600)
.-.++.|.|.+|+|||++|.+++.+.
T Consensus 33 ~G~l~~i~G~~G~GKT~~~l~~a~~~ 58 (258)
T d2i1qa2 33 SQSVTEFAGVFGSGKTQIMHQSCVNL 58 (258)
T ss_dssp TTEEEEEEESTTSSHHHHHHHHHHHT
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHH
Confidence 44799999999999999998887643
No 137
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.16 E-value=0.033 Score=47.26 Aligned_cols=22 Identities=36% Similarity=0.422 Sum_probs=18.9
Q ss_pred EEEEEccCCChHHHHHHHHhhh
Q 039283 213 VVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
-|.|+|.+|+|||+|+..+..+
T Consensus 5 KivlvG~~~vGKTsLi~r~~~~ 26 (167)
T d1z08a1 5 KVVLLGEGCVGKTSLVLRYCEN 26 (167)
T ss_dssp EEEEECCTTSCHHHHHHHHHHC
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 3689999999999999987653
No 138
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.14 E-value=0.034 Score=47.38 Aligned_cols=21 Identities=43% Similarity=0.645 Sum_probs=18.3
Q ss_pred EEEEccCCChHHHHHHHHhhh
Q 039283 214 VSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 214 v~I~G~~GiGKTtLA~~v~~~ 234 (600)
|+|+|.+|+|||||...+..+
T Consensus 5 i~viG~~~vGKTsLi~r~~~~ 25 (171)
T d2erxa1 5 VAVFGAGGVGKSSLVLRFVKG 25 (171)
T ss_dssp EEEECCTTSSHHHHHHHHHTC
T ss_pred EEEECCCCCCHHHHHHHHHhC
Confidence 578999999999999888764
No 139
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]}
Probab=92.13 E-value=0.035 Score=49.25 Aligned_cols=19 Identities=37% Similarity=0.552 Sum_probs=17.6
Q ss_pred EEEEEccCCChHHHHHHHH
Q 039283 213 VVSIKGLGGVGKTTLAQLV 231 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v 231 (600)
+|+|+|+.|+||||.|+.+
T Consensus 5 iIgitG~igSGKStv~~~l 23 (208)
T d1vhta_ 5 IVALTGGIGSGKSTVANAF 23 (208)
T ss_dssp EEEEECCTTSCHHHHHHHH
T ss_pred EEEEECCCcCCHHHHHHHH
Confidence 8999999999999999765
No 140
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=92.13 E-value=0.037 Score=51.46 Aligned_cols=23 Identities=35% Similarity=0.453 Sum_probs=20.7
Q ss_pred ceEEEEEccCCChHHHHHHHHhh
Q 039283 211 FSVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 211 ~~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
-.+++|+|+.|+|||||++.+..
T Consensus 62 Ge~vaivG~nGsGKSTLl~~i~G 84 (281)
T d1r0wa_ 62 GEMLAITGSTGSGKTSLLMLILG 84 (281)
T ss_dssp TCEEEEEESTTSSHHHHHHHHHT
T ss_pred CCEEEEECCCCChHHHHHHHHhC
Confidence 35899999999999999999875
No 141
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2 [TaxId: 10090]}
Probab=92.08 E-value=0.035 Score=46.96 Aligned_cols=22 Identities=32% Similarity=0.465 Sum_probs=18.9
Q ss_pred EEEEEccCCChHHHHHHHHhhh
Q 039283 213 VVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
-|+|+|.+|+|||||...+...
T Consensus 4 ki~ivG~~~~GKTsLi~~l~~~ 25 (165)
T d1ksha_ 4 RLLMLGLDNAGKTTILKKFNGE 25 (165)
T ss_dssp EEEEECSTTSSHHHHHHHHTTC
T ss_pred EEEEECCCCCCHHHHHHHHcCC
Confidence 3679999999999999988653
No 142
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.08 E-value=0.034 Score=47.40 Aligned_cols=22 Identities=32% Similarity=0.495 Sum_probs=19.2
Q ss_pred EEEEEccCCChHHHHHHHHhhh
Q 039283 213 VVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
-|.|+|.+|+|||||.+.+.++
T Consensus 7 Ki~lvG~~~vGKTsLi~~l~~~ 28 (171)
T d2ew1a1 7 KIVLIGNAGVGKTCLVRRFTQG 28 (171)
T ss_dssp EEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 4789999999999999988764
No 143
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=92.07 E-value=0.036 Score=47.21 Aligned_cols=22 Identities=32% Similarity=0.344 Sum_probs=19.0
Q ss_pred EEEEEccCCChHHHHHHHHhhh
Q 039283 213 VVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
-|.++|.+|+|||||...+..+
T Consensus 7 Ki~vvG~~~vGKTsLi~~l~~~ 28 (169)
T d3raba_ 7 KILIIGNSSVGKTSFLFRYADD 28 (169)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHcC
Confidence 3789999999999999988653
No 144
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.03 E-value=0.035 Score=46.89 Aligned_cols=21 Identities=33% Similarity=0.344 Sum_probs=18.6
Q ss_pred EEEEccCCChHHHHHHHHhhh
Q 039283 214 VSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 214 v~I~G~~GiGKTtLA~~v~~~ 234 (600)
|+|+|.+|+|||+|+..+.++
T Consensus 3 v~vvG~~~vGKTsLi~r~~~~ 23 (164)
T d1yzqa1 3 LVFLGEQSVGKTSLITRFMYD 23 (164)
T ss_dssp EEEEESTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 678999999999999988754
No 145
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=92.02 E-value=0.036 Score=49.70 Aligned_cols=25 Identities=32% Similarity=0.486 Sum_probs=22.2
Q ss_pred CceEEEEEccCCChHHHHHHHHhhh
Q 039283 210 GFSVVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 210 ~~~vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
++++..|+|.-|.|||||.+.+...
T Consensus 2 ~iPv~iitGFLGaGKTTll~~lL~~ 26 (222)
T d1nija1 2 PIAVTLLTGFLGAGKTTLLRHILNE 26 (222)
T ss_dssp CEEEEEEEESSSSSCHHHHHHHHHS
T ss_pred CCCEEEEeeCCCCCHHHHHHHHHhc
Confidence 5789999999999999999888763
No 146
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]}
Probab=91.99 E-value=0.037 Score=48.92 Aligned_cols=20 Identities=45% Similarity=0.600 Sum_probs=18.1
Q ss_pred eEEEEEccCCChHHHHHHHH
Q 039283 212 SVVSIKGLGGVGKTTLAQLV 231 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v 231 (600)
-+|+|+|..|+||||+|+.+
T Consensus 3 ~iIgITG~igSGKStv~~~l 22 (205)
T d1jjva_ 3 YIVGLTGGIGSGKTTIANLF 22 (205)
T ss_dssp EEEEEECSTTSCHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHH
Confidence 47999999999999999866
No 147
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.98 E-value=0.037 Score=47.08 Aligned_cols=21 Identities=33% Similarity=0.453 Sum_probs=18.7
Q ss_pred EEEEccCCChHHHHHHHHhhh
Q 039283 214 VSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 214 v~I~G~~GiGKTtLA~~v~~~ 234 (600)
|.|+|.+|+|||+|...+.++
T Consensus 5 i~lvG~~~vGKTsli~r~~~~ 25 (168)
T d2atva1 5 LAIFGRAGVGKSALVVRFLTK 25 (168)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHhC
Confidence 678999999999999988764
No 148
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=91.91 E-value=0.038 Score=46.89 Aligned_cols=21 Identities=33% Similarity=0.469 Sum_probs=18.5
Q ss_pred EEEEccCCChHHHHHHHHhhh
Q 039283 214 VSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 214 v~I~G~~GiGKTtLA~~v~~~ 234 (600)
|+|+|.+|+|||||...+.++
T Consensus 7 i~lvG~~~vGKTsli~rl~~~ 27 (167)
T d1z0ja1 7 VCLLGDTGVGKSSIMWRFVED 27 (167)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 678899999999999988764
No 149
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.87 E-value=0.037 Score=47.31 Aligned_cols=23 Identities=30% Similarity=0.456 Sum_probs=19.6
Q ss_pred eEEEEEccCCChHHHHHHHHhhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
--|.|+|.+|+|||+|+..+.++
T Consensus 7 ~Kv~lvG~~~vGKTsLi~r~~~~ 29 (173)
T d2fn4a1 7 HKLVVVGGGGVGKSALTIQFIQS 29 (173)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCcCHHHHHHHHHhC
Confidence 35779999999999999887753
No 150
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.83 E-value=0.039 Score=46.95 Aligned_cols=22 Identities=27% Similarity=0.338 Sum_probs=19.0
Q ss_pred EEEEEccCCChHHHHHHHHhhh
Q 039283 213 VVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
-|.|+|.+|+|||+|+..+.+.
T Consensus 8 Ki~vvG~~~vGKTsLi~~l~~~ 29 (170)
T d1r2qa_ 8 KLVLLGESAVGKSSLVLRFVKG 29 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 3689999999999999888754
No 151
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.79 E-value=0.04 Score=46.81 Aligned_cols=21 Identities=38% Similarity=0.555 Sum_probs=18.4
Q ss_pred EEEEccCCChHHHHHHHHhhh
Q 039283 214 VSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 214 v~I~G~~GiGKTtLA~~v~~~ 234 (600)
|+|+|.+|+|||+|++.+...
T Consensus 4 i~lvG~~~vGKTsLi~~~~~~ 24 (168)
T d2gjsa1 4 VLLLGAPGVGKSALARIFGGV 24 (168)
T ss_dssp EEEECCTTSSHHHHHHHHHTC
T ss_pred EEEECCCCcCHHHHHHHHhCC
Confidence 678999999999999888653
No 152
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.78 E-value=0.038 Score=47.83 Aligned_cols=22 Identities=32% Similarity=0.333 Sum_probs=18.9
Q ss_pred EEEEEccCCChHHHHHHHHhhh
Q 039283 213 VVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
-|.|+|.+|+|||||+..+.+.
T Consensus 7 Ki~ivG~~~vGKTsLi~~l~~~ 28 (186)
T d2f7sa1 7 KLLALGDSGVGKTTFLYRYTDN 28 (186)
T ss_dssp EEEEESCTTSSHHHHHHHHHCS
T ss_pred EEEEECCCCcCHHHHHHHHhcC
Confidence 3779999999999999888753
No 153
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=91.70 E-value=0.04 Score=46.67 Aligned_cols=22 Identities=32% Similarity=0.406 Sum_probs=19.1
Q ss_pred EEEEEccCCChHHHHHHHHhhh
Q 039283 213 VVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
-|+|+|.+|+|||||+..+.+.
T Consensus 4 Ki~vvG~~~vGKTSli~~l~~~ 25 (166)
T d1g16a_ 4 KILLIGDSGVGKSCLLVRFVED 25 (166)
T ss_dssp EEEEEESTTSSHHHHHHHHHHC
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 3789999999999999988763
No 154
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=91.67 E-value=0.042 Score=46.95 Aligned_cols=22 Identities=45% Similarity=0.502 Sum_probs=19.0
Q ss_pred EEEEEccCCChHHHHHHHHhhh
Q 039283 213 VVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
-|+|+|.+|+|||||...+.+.
T Consensus 4 Ki~~vG~~~vGKSsLi~~~~~~ 25 (175)
T d1ky3a_ 4 KVIILGDSGVGKTSLMHRYVND 25 (175)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHcC
Confidence 4789999999999999887653
No 155
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=91.66 E-value=0.069 Score=47.53 Aligned_cols=32 Identities=34% Similarity=0.577 Sum_probs=25.8
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEccCCChHHHHHHHHhh
Q 039283 193 KEAIVELLLRDDLRADDGFSVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 193 ~~~l~~~L~~~~~~~~~~~~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
++.|.++|.. +..+++|.+|+|||||...+..
T Consensus 86 ~~~L~~~l~~---------kt~~~~G~SGVGKSTLiN~L~~ 117 (225)
T d1u0la2 86 IEELKEYLKG---------KISTMAGLSGVGKSSLLNAINP 117 (225)
T ss_dssp HHHHHHHHSS---------SEEEEECSTTSSHHHHHHHHST
T ss_pred HhhHHHHhcC---------CeEEEECCCCCCHHHHHHhhcc
Confidence 6778887731 4778999999999999988864
No 156
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.65 E-value=0.041 Score=46.90 Aligned_cols=22 Identities=32% Similarity=0.475 Sum_probs=19.1
Q ss_pred EEEEEccCCChHHHHHHHHhhh
Q 039283 213 VVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
-|.|+|.+|+|||+|...+..+
T Consensus 7 Ki~lvG~~~vGKTsLi~r~~~~ 28 (171)
T d2erya1 7 RLVVVGGGGVGKSALTIQFIQS 28 (171)
T ss_dssp EEEEEECTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHhC
Confidence 4789999999999999888764
No 157
>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=91.63 E-value=0.08 Score=47.31 Aligned_cols=37 Identities=19% Similarity=0.197 Sum_probs=27.2
Q ss_pred eEEEEE-ccCCChHHHHHHHHhhhhhhhccCCceEEEEeC
Q 039283 212 SVVSIK-GLGGVGKTTLAQLVNKDDRVQRHFQIKAWTCVS 250 (600)
Q Consensus 212 ~vv~I~-G~~GiGKTtLA~~v~~~~~~~~~F~~~~wv~vs 250 (600)
++|+|+ |-||+||||+|..+..... ..-..++.|++.
T Consensus 2 kvIav~s~KGGvGKTtia~nlA~~la--~~g~~VlliD~D 39 (232)
T d1hyqa_ 2 RTITVASGKGGTGKTTITANLGVALA--QLGHDVTIVDAD 39 (232)
T ss_dssp EEEEEEESSSCSCHHHHHHHHHHHHH--HTTCCEEEEECC
T ss_pred EEEEEECCCCCChHHHHHHHHHHHHH--hCCCCEEEEeCC
Confidence 677777 8899999999988876433 333457788764
No 158
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=91.61 E-value=0.049 Score=48.46 Aligned_cols=24 Identities=33% Similarity=0.472 Sum_probs=21.2
Q ss_pred ceEEEEEccCCChHHHHHHHHhhh
Q 039283 211 FSVVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 211 ~~vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
-..|+|-|+.|+||||+++.+...
T Consensus 3 Gk~I~iEG~DGsGKST~~~~L~~~ 26 (214)
T d1tmka_ 3 GKLILIEGLDRTGKTTQCNILYKK 26 (214)
T ss_dssp CCEEEEEESTTSSHHHHHHHHHHH
T ss_pred eEEEEEECCCCCcHHHHHHHHHHH
Confidence 468999999999999999988763
No 159
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.58 E-value=0.043 Score=46.53 Aligned_cols=21 Identities=33% Similarity=0.569 Sum_probs=18.6
Q ss_pred EEEEccCCChHHHHHHHHhhh
Q 039283 214 VSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 214 v~I~G~~GiGKTtLA~~v~~~ 234 (600)
|+|+|.+|+|||+|...+...
T Consensus 6 ivvvG~~~vGKTsli~r~~~~ 26 (167)
T d1c1ya_ 6 LVVLGSGGVGKSALTVQFVQG 26 (167)
T ss_dssp EEEECSTTSSHHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHHcC
Confidence 679999999999999988654
No 160
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.52 E-value=0.043 Score=46.50 Aligned_cols=21 Identities=33% Similarity=0.634 Sum_probs=18.8
Q ss_pred EEEEccCCChHHHHHHHHhhh
Q 039283 214 VSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 214 v~I~G~~GiGKTtLA~~v~~~ 234 (600)
|+|+|.+|+|||+|+..+.++
T Consensus 6 i~viG~~~vGKTsli~~l~~~ 26 (166)
T d1ctqa_ 6 LVVVGAGGVGKSALTIQLIQN 26 (166)
T ss_dssp EEEEESTTSSHHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHHhC
Confidence 788999999999999988764
No 161
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=91.52 E-value=0.049 Score=46.58 Aligned_cols=25 Identities=32% Similarity=0.477 Sum_probs=20.4
Q ss_pred CceEEEEEccCCChHHHHHHHHhhh
Q 039283 210 GFSVVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 210 ~~~vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
+..-|+|+|.+|+|||||...+...
T Consensus 12 k~~kI~lvG~~~vGKTsLl~~l~~~ 36 (186)
T d1f6ba_ 12 KTGKLVFLGLDNAGKTTLLHMLKDD 36 (186)
T ss_dssp CCEEEEEEEETTSSHHHHHHHHSCC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCC
Confidence 3455789999999999999888653
No 162
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.51 E-value=0.043 Score=46.48 Aligned_cols=23 Identities=26% Similarity=0.388 Sum_probs=19.4
Q ss_pred eEEEEEccCCChHHHHHHHHhhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
.-|+|+|.+|+|||+|...+.+.
T Consensus 5 ~Kv~liG~~~vGKTsLl~~~~~~ 27 (167)
T d1xtqa1 5 RKIAILGYRSVGKSSLTIQFVEG 27 (167)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHS
T ss_pred eEEEEECCCCcCHHHHHHHHHhC
Confidence 45788999999999999887653
No 163
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=91.42 E-value=0.034 Score=50.23 Aligned_cols=22 Identities=32% Similarity=0.518 Sum_probs=20.2
Q ss_pred eEEEEEccCCChHHHHHHHHhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
.+++|.|+.|+|||||.+.+..
T Consensus 32 e~~~iiG~sGsGKSTll~~i~g 53 (242)
T d1oxxk2 32 ERFGILGPSGAGKTTFMRIIAG 53 (242)
T ss_dssp CEEEEECSCHHHHHHHHHHHHT
T ss_pred CEEEEECCCCCcHHHHHHHHHc
Confidence 5999999999999999998865
No 164
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=91.42 E-value=0.05 Score=46.29 Aligned_cols=21 Identities=43% Similarity=0.431 Sum_probs=19.2
Q ss_pred EEEEEccCCChHHHHHHHHhh
Q 039283 213 VVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~~ 233 (600)
.|+|.|.+|+|||||.+.+..
T Consensus 2 ~V~liG~~n~GKSsLi~~L~~ 22 (171)
T d1mkya1 2 TVLIVGRPNVGKSTLFNKLVK 22 (171)
T ss_dssp EEEEECCTTSSHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 589999999999999998865
No 165
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.39 E-value=0.046 Score=46.75 Aligned_cols=22 Identities=32% Similarity=0.493 Sum_probs=19.2
Q ss_pred EEEEEccCCChHHHHHHHHhhh
Q 039283 213 VVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
-|+|+|..|+|||||+..+.++
T Consensus 6 Ki~vvG~~~vGKTsLi~~~~~~ 27 (175)
T d2f9la1 6 KVVLIGDSGVGKSNLLSRFTRN 27 (175)
T ss_dssp EEEEESSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 4789999999999999988653
No 166
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=91.39 E-value=0.048 Score=47.92 Aligned_cols=23 Identities=35% Similarity=0.504 Sum_probs=20.2
Q ss_pred eEEEEEccCCChHHHHHHHHhhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
+.|+|+|.+|+|||||...+.+.
T Consensus 4 p~V~lvG~~n~GKTSLln~l~~~ 26 (209)
T d1nrjb_ 4 PSIIIAGPQNSGKTSLLTLLTTD 26 (209)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHS
T ss_pred CEEEEECCCCCCHHHHHHHHhCC
Confidence 47899999999999999888753
No 167
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Probab=91.35 E-value=0.054 Score=52.39 Aligned_cols=24 Identities=38% Similarity=0.416 Sum_probs=20.7
Q ss_pred CceEEEEEccCCChHHHHHHHHhh
Q 039283 210 GFSVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 210 ~~~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
....+...||.|||||-||+.+..
T Consensus 67 p~~niLfiGPTGvGKTElAk~LA~ 90 (364)
T d1um8a_ 67 SKSNILLIGPTGSGKTLMAQTLAK 90 (364)
T ss_dssp CCCCEEEECCTTSSHHHHHHHHHH
T ss_pred CCcceeeeCCCCccHHHHHHHHHh
Confidence 456688889999999999999875
No 168
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.32 E-value=0.046 Score=46.65 Aligned_cols=22 Identities=23% Similarity=0.308 Sum_probs=18.9
Q ss_pred EEEEEccCCChHHHHHHHHhhh
Q 039283 213 VVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
-|+|+|.+|+|||||+..+..+
T Consensus 7 KI~lvG~~~vGKTsll~~~~~~ 28 (174)
T d2bmea1 7 KFLVIGNAGTGKSCLLHQFIEK 28 (174)
T ss_dssp EEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 3789999999999999887653
No 169
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.32 E-value=0.046 Score=46.84 Aligned_cols=22 Identities=41% Similarity=0.489 Sum_probs=18.7
Q ss_pred EEEEEccCCChHHHHHHHHhhh
Q 039283 213 VVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
-|.|+|.+|+|||+|+..+.++
T Consensus 4 KivvvG~~~vGKTsLi~~~~~~ 25 (177)
T d1kmqa_ 4 KLVIVGDGACGKTCLLIVNSKD 25 (177)
T ss_dssp EEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 4678899999999999887654
No 170
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=91.21 E-value=0.051 Score=45.32 Aligned_cols=21 Identities=33% Similarity=0.526 Sum_probs=18.6
Q ss_pred EEEEEccCCChHHHHHHHHhh
Q 039283 213 VVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~~ 233 (600)
-|+|+|.+|+|||||...+..
T Consensus 2 KI~liG~~nvGKSSLln~l~~ 22 (166)
T d2qtvb1 2 KLLFLGLDNAGKTTLLHMLKN 22 (166)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 478999999999999988765
No 171
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]}
Probab=91.20 E-value=0.05 Score=49.28 Aligned_cols=22 Identities=32% Similarity=0.522 Sum_probs=20.3
Q ss_pred eEEEEEccCCChHHHHHHHHhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
.+++|.|+.|.|||||.+.+.-
T Consensus 33 ei~~liGpnGaGKSTl~~~i~G 54 (240)
T d1ji0a_ 33 QIVTLIGANGAGKTTTLSAIAG 54 (240)
T ss_dssp CEEEEECSTTSSHHHHHHHHTT
T ss_pred CEEEEECCCCCcHHHHHHHHhC
Confidence 5999999999999999998875
No 172
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=91.18 E-value=0.05 Score=46.20 Aligned_cols=22 Identities=18% Similarity=0.306 Sum_probs=18.7
Q ss_pred EEEEEccCCChHHHHHHHHhhh
Q 039283 213 VVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
-|+|+|.+|+|||+|...+...
T Consensus 5 Ki~vvG~~~vGKTsLi~~~~~~ 26 (170)
T d1ek0a_ 5 KLVLLGEAAVGKSSIVLRFVSN 26 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 3678999999999999887654
No 173
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=91.12 E-value=0.06 Score=46.12 Aligned_cols=24 Identities=33% Similarity=0.284 Sum_probs=21.2
Q ss_pred ceEEEEEccCCChHHHHHHHHhhh
Q 039283 211 FSVVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 211 ~~vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
.+.|+|+|.+|+|||||...+...
T Consensus 5 ~~~I~lvG~~~~GKSSLin~l~~~ 28 (178)
T d1wf3a1 5 SGFVAIVGKPNVGKSTLLNNLLGV 28 (178)
T ss_dssp EEEEEEECSTTSSHHHHHHHHHTS
T ss_pred CcEEEEECCCCCCHHHHHHHHhCC
Confidence 457999999999999999998764
No 174
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=91.11 E-value=0.053 Score=47.75 Aligned_cols=23 Identities=30% Similarity=0.237 Sum_probs=20.1
Q ss_pred eEEEEEccCCChHHHHHHHHhhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
+-|+|+|.+|+|||||...+...
T Consensus 1 k~V~ivG~~~~GKTsLl~~l~~~ 23 (207)
T d2fh5b1 1 RAVLFVGLCDSGKTLLFVRLLTG 23 (207)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHS
T ss_pred CEEEEECCCCCCHHHHHHHHHcC
Confidence 36899999999999999888764
No 175
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=90.94 E-value=0.064 Score=45.79 Aligned_cols=24 Identities=29% Similarity=0.371 Sum_probs=21.1
Q ss_pred ceEEEEEccCCChHHHHHHHHhhh
Q 039283 211 FSVVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 211 ~~vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
...|+|+|.+|+|||||...+.+.
T Consensus 5 ~~~I~iiG~~nvGKSSLin~L~~~ 28 (179)
T d1egaa1 5 CGFIAIVGRPNVGKSTLLNKLLGQ 28 (179)
T ss_dssp EEEEEEECSSSSSHHHHHHHHHTC
T ss_pred ccEEEEECCCCCCHHHHHHHHhCC
Confidence 467899999999999999999753
No 176
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.92 E-value=0.056 Score=45.92 Aligned_cols=22 Identities=36% Similarity=0.407 Sum_probs=19.1
Q ss_pred EEEEEccCCChHHHHHHHHhhh
Q 039283 213 VVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
-|+|+|.+|+|||+|+..+.+.
T Consensus 8 Ki~vvG~~~vGKTsli~~~~~~ 29 (170)
T d2g6ba1 8 KVMLVGDSGVGKTCLLVRFKDG 29 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 4889999999999999887653
No 177
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.91 E-value=0.064 Score=46.17 Aligned_cols=23 Identities=30% Similarity=0.325 Sum_probs=19.7
Q ss_pred eEEEEEccCCChHHHHHHHHhhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
--|.|+|.+|+|||+|...+..+
T Consensus 6 iKivviG~~~vGKTsli~~~~~~ 28 (183)
T d1mh1a_ 6 IKCVVVGDGAVGKTCLLISYTTN 28 (183)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCCCHHHHHHHHHhC
Confidence 45889999999999999888753
No 178
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=90.90 E-value=0.055 Score=49.49 Aligned_cols=22 Identities=36% Similarity=0.546 Sum_probs=20.2
Q ss_pred eEEEEEccCCChHHHHHHHHhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
.+++|.|+.|.|||||++.+.-
T Consensus 31 ei~~liG~nGaGKSTLl~~i~G 52 (254)
T d1g6ha_ 31 DVTLIIGPNGSGKSTLINVITG 52 (254)
T ss_dssp CEEEEECSTTSSHHHHHHHHTT
T ss_pred CEEEEECCCCCcHHHHHHHHHC
Confidence 5899999999999999998875
No 179
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=90.88 E-value=0.058 Score=46.64 Aligned_cols=21 Identities=24% Similarity=0.411 Sum_probs=18.2
Q ss_pred EEEEEccCCChHHHHHHHHhh
Q 039283 213 VVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~~ 233 (600)
-|.++|.+|+|||+|.+.+..
T Consensus 4 KivllG~~~vGKTsl~~r~~~ 24 (195)
T d1svsa1 4 KLLLLGAGESGKSTIVKQMKI 24 (195)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhh
Confidence 368999999999999988754
No 180
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]}
Probab=90.83 E-value=0.063 Score=48.50 Aligned_cols=23 Identities=26% Similarity=0.456 Sum_probs=20.5
Q ss_pred ceEEEEEccCCChHHHHHHHHhh
Q 039283 211 FSVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 211 ~~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
-.+++|+|+.|.|||||.+.+..
T Consensus 28 Gei~glvG~nGaGKSTLl~~l~G 50 (238)
T d1vpla_ 28 GEIFGLIGPNGAGKTTTLRIIST 50 (238)
T ss_dssp TCEEEEECCTTSSHHHHHHHHTT
T ss_pred CCEEEEECCCCCCHHHHHHHHhc
Confidence 35999999999999999998865
No 181
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.79 E-value=0.055 Score=46.77 Aligned_cols=22 Identities=36% Similarity=0.416 Sum_probs=19.1
Q ss_pred EEEEEccCCChHHHHHHHHhhh
Q 039283 213 VVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
-|.|+|.+|+|||+|...+.++
T Consensus 11 Ki~lvG~~~vGKTsLi~r~~~~ 32 (185)
T d2atxa1 11 KCVVVGDGAVGKTCLLMSYAND 32 (185)
T ss_dssp EEEEEECTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhhC
Confidence 3789999999999999887764
No 182
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3 [TaxId: 10090]}
Probab=90.69 E-value=0.082 Score=44.98 Aligned_cols=22 Identities=32% Similarity=0.441 Sum_probs=19.3
Q ss_pred eEEEEEccCCChHHHHHHHHhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
--|+|+|.+|+|||||...+..
T Consensus 17 ~kI~vvG~~~vGKSsLi~~l~~ 38 (176)
T d1fzqa_ 17 VRILLLGLDNAGKTTLLKQLAS 38 (176)
T ss_dssp EEEEEEESTTSSHHHHHHHHCC
T ss_pred EEEEEECCCCCCHHHHHHHHhc
Confidence 4578999999999999988865
No 183
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=90.67 E-value=0.056 Score=47.11 Aligned_cols=22 Identities=32% Similarity=0.436 Sum_probs=19.1
Q ss_pred EEEEEccCCChHHHHHHHHhhh
Q 039283 213 VVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
-|+|+|.+|+|||||+..+...
T Consensus 8 KivvvG~~~vGKTsli~~l~~~ 29 (194)
T d2bcgy1 8 KLLLIGNSGVGKSCLLLRFSDD 29 (194)
T ss_dssp EEEEEESTTSSHHHHHHHHHHC
T ss_pred EEEEECCCCcCHHHHHHHHhhC
Confidence 3789999999999999988764
No 184
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.59 E-value=0.06 Score=45.90 Aligned_cols=21 Identities=43% Similarity=0.577 Sum_probs=18.4
Q ss_pred EEEEEccCCChHHHHHHHHhh
Q 039283 213 VVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~~ 233 (600)
-|.++|.+|+|||+|+..+..
T Consensus 5 Kv~lvG~~~vGKTsLi~~~~~ 25 (172)
T d2g3ya1 5 RVVLIGEQGVGKSTLANIFAG 25 (172)
T ss_dssp EEEEECCTTSSHHHHHHHHHC
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 478999999999999988764
No 185
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo sapiens), ARL5A [TaxId: 9606]}
Probab=90.58 E-value=0.082 Score=44.91 Aligned_cols=23 Identities=35% Similarity=0.408 Sum_probs=19.4
Q ss_pred eEEEEEccCCChHHHHHHHHhhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
--|.|+|.+|+|||||...+...
T Consensus 16 ~kI~vvG~~~~GKSsLi~rl~~~ 38 (177)
T d1zj6a1 16 HKVIIVGLDNAGKTTILYQFSMN 38 (177)
T ss_dssp EEEEEEESTTSSHHHHHHHHHTT
T ss_pred EEEEEECCCCCCHHHHHHHHhcC
Confidence 45779999999999999887653
No 186
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=90.54 E-value=0.063 Score=46.27 Aligned_cols=21 Identities=43% Similarity=0.488 Sum_probs=18.6
Q ss_pred EEEEccCCChHHHHHHHHhhh
Q 039283 214 VSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 214 v~I~G~~GiGKTtLA~~v~~~ 234 (600)
|+|+|.+|+|||||+..+.+.
T Consensus 5 v~vvG~~~vGKSSLi~~l~~~ 25 (184)
T d1vg8a_ 5 VIILGDSGVGKTSLMNQYVNK 25 (184)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 779999999999999888753
No 187
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus) [TaxId: 9490]}
Probab=90.50 E-value=0.064 Score=45.51 Aligned_cols=23 Identities=39% Similarity=0.514 Sum_probs=19.7
Q ss_pred eEEEEEccCCChHHHHHHHHhhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
--|.|+|.+|+|||||+..+..+
T Consensus 5 ~KivlvG~~~vGKTsli~~~~~~ 27 (168)
T d1u8za_ 5 HKVIMVGSGGVGKSALTLQFMYD 27 (168)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHS
T ss_pred eEEEEECCCCcCHHHHHHHHHhC
Confidence 45789999999999999987653
No 188
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo sapiens), ARL8A [TaxId: 9606]}
Probab=90.45 E-value=0.065 Score=45.17 Aligned_cols=21 Identities=29% Similarity=0.499 Sum_probs=18.0
Q ss_pred EEEEccCCChHHHHHHHHhhh
Q 039283 214 VSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 214 v~I~G~~GiGKTtLA~~v~~~ 234 (600)
|+|.|.+|+|||||...+...
T Consensus 5 i~i~G~~~~GKTsLl~~l~~~ 25 (164)
T d1zd9a1 5 LTLVGLQYSGKTTFVNVIASG 25 (164)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHcC
Confidence 568899999999999888653
No 189
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]}
Probab=90.40 E-value=0.043 Score=50.16 Aligned_cols=23 Identities=35% Similarity=0.559 Sum_probs=19.8
Q ss_pred ceEEEEEccCCChHHHHHHHHhh
Q 039283 211 FSVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 211 ~~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
-..++|+|+.|+|||||++.+..
T Consensus 44 Ge~vaivG~sGsGKSTLl~ll~g 66 (255)
T d2hyda1 44 GETVAFVGMSGGGKSTLINLIPR 66 (255)
T ss_dssp TCEEEEECSTTSSHHHHHTTTTT
T ss_pred CCEEEEECCCCCcHHHHHHHHHh
Confidence 35899999999999999987753
No 190
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]}
Probab=90.36 E-value=0.062 Score=46.12 Aligned_cols=22 Identities=27% Similarity=0.385 Sum_probs=19.5
Q ss_pred EEEEEccCCChHHHHHHHHhhh
Q 039283 213 VVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
-|+|+|.+|+|||||...+.+.
T Consensus 2 ~I~lvG~~nvGKSsLin~l~~~ 23 (184)
T d2cxxa1 2 TIIFAGRSNVGKSTLIYRLTGK 23 (184)
T ss_dssp EEEEEEBTTSSHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 4899999999999999998753
No 191
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.36 E-value=0.066 Score=45.64 Aligned_cols=22 Identities=36% Similarity=0.507 Sum_probs=18.9
Q ss_pred EEEEEccCCChHHHHHHHHhhh
Q 039283 213 VVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
-|+|+|.+|+|||||+..+.+.
T Consensus 8 KI~vvG~~~vGKSSli~~~~~~ 29 (174)
T d1wmsa_ 8 KVILLGDGGVGKSSLMNRYVTN 29 (174)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHhC
Confidence 3789999999999999887653
No 192
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]}
Probab=90.31 E-value=0.12 Score=43.12 Aligned_cols=26 Identities=31% Similarity=0.249 Sum_probs=22.6
Q ss_pred CceEEEEEccCCChHHHHHHHHhhhh
Q 039283 210 GFSVVSIKGLGGVGKTTLAQLVNKDD 235 (600)
Q Consensus 210 ~~~vv~I~G~~GiGKTtLA~~v~~~~ 235 (600)
+.-+|.+.|.=|+||||+++.+++..
T Consensus 32 ~g~ii~L~G~LGaGKTtfvr~~~~~l 57 (158)
T d1htwa_ 32 KAIMVYLNGDLGAGKTTLTRGMLQGI 57 (158)
T ss_dssp SCEEEEEECSTTSSHHHHHHHHHHHT
T ss_pred CCeEEEEecCCCccHHHHHHHHHhhc
Confidence 34589999999999999999998754
No 193
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain {Thermus thermophilus [TaxId: 274]}
Probab=90.30 E-value=0.048 Score=46.84 Aligned_cols=20 Identities=25% Similarity=0.491 Sum_probs=18.5
Q ss_pred EEEEccCCChHHHHHHHHhh
Q 039283 214 VSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 214 v~I~G~~GiGKTtLA~~v~~ 233 (600)
|+|+|.+|+|||||...+..
T Consensus 4 VaivG~~nvGKSTLin~L~~ 23 (180)
T d1udxa2 4 VGLVGYPNAGKSSLLAAMTR 23 (180)
T ss_dssp EEEECCGGGCHHHHHHHHCS
T ss_pred EEEECCCCCCHHHHHHHHhC
Confidence 89999999999999999864
No 194
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase {Bacteriophage T4 [TaxId: 10665]}
Probab=90.23 E-value=0.076 Score=47.94 Aligned_cols=22 Identities=23% Similarity=0.421 Sum_probs=19.8
Q ss_pred eEEEEEccCCChHHHHHHHHhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
.+|+|+|..|+||||+|+.+.+
T Consensus 2 ~iIgiTG~igSGKsTva~~l~e 23 (241)
T d1deka_ 2 KLIFLSGVKRSGKDTTADFIMS 23 (241)
T ss_dssp EEEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHH
Confidence 5899999999999999988754
No 195
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.22 E-value=0.069 Score=45.68 Aligned_cols=21 Identities=38% Similarity=0.551 Sum_probs=18.7
Q ss_pred EEEEccCCChHHHHHHHHhhh
Q 039283 214 VSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 214 v~I~G~~GiGKTtLA~~v~~~ 234 (600)
|.|+|.+|+|||+|...+.+.
T Consensus 10 i~vvG~~~vGKTsli~~l~~~ 30 (177)
T d1x3sa1 10 ILIIGESGVGKSSLLLRFTDD 30 (177)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 789999999999999987653
No 196
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=90.22 E-value=0.067 Score=45.96 Aligned_cols=21 Identities=33% Similarity=0.507 Sum_probs=18.6
Q ss_pred EEEEccCCChHHHHHHHHhhh
Q 039283 214 VSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 214 v~I~G~~GiGKTtLA~~v~~~ 234 (600)
|.++|.+|+|||+|++.+.+.
T Consensus 5 ivliG~~~vGKTsli~r~~~~ 25 (179)
T d1m7ba_ 5 IVVVGDSQCGKTALLHVFAKD 25 (179)
T ss_dssp EEEEESTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 679999999999999888764
No 197
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=90.10 E-value=0.067 Score=46.55 Aligned_cols=19 Identities=26% Similarity=0.462 Sum_probs=17.2
Q ss_pred EEEEEccCCChHHHHHHHH
Q 039283 213 VVSIKGLGGVGKTTLAQLV 231 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v 231 (600)
-|.|.|.+|+|||||...+
T Consensus 4 KivllG~~~vGKTsll~r~ 22 (200)
T d1zcba2 4 KILLLGAGESGKSTFLKQM 22 (200)
T ss_dssp EEEEECSTTSSHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHH
Confidence 4779999999999999887
No 198
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.02 E-value=0.045 Score=46.61 Aligned_cols=21 Identities=33% Similarity=0.463 Sum_probs=17.1
Q ss_pred EEEEccCCChHHHHHHHHhhh
Q 039283 214 VSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 214 v~I~G~~GiGKTtLA~~v~~~ 234 (600)
|+|+|.+|+|||+|...+.+.
T Consensus 6 i~vvG~~~vGKTsli~~~~~~ 26 (170)
T d1i2ma_ 6 LVLVGDGGTGKTTFVKRHLTG 26 (170)
T ss_dssp EEEEECTTSSHHHHHHTTC--
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 678899999999999877653
No 199
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=89.98 E-value=0.075 Score=45.11 Aligned_cols=21 Identities=33% Similarity=0.531 Sum_probs=18.4
Q ss_pred EEEEccCCChHHHHHHHHhhh
Q 039283 214 VSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 214 v~I~G~~GiGKTtLA~~v~~~ 234 (600)
|.++|.+|+|||+|+..+.++
T Consensus 7 i~lvG~~~vGKTsll~~~~~~ 27 (169)
T d1x1ra1 7 LVVVGDGGVGKSALTIQFFQK 27 (169)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 667899999999999988764
No 200
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.82 E-value=0.074 Score=46.14 Aligned_cols=22 Identities=32% Similarity=0.367 Sum_probs=18.5
Q ss_pred EEEEEccCCChHHHHHHHHhhh
Q 039283 213 VVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
-|+|+|.+|+|||+|+..+...
T Consensus 5 KvvllG~~~vGKTSli~r~~~~ 26 (191)
T d2ngra_ 5 KCVVVGDGAVGKTCLLISYTTN 26 (191)
T ss_dssp EEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 3678999999999999887653
No 201
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]}
Probab=89.79 E-value=0.063 Score=48.34 Aligned_cols=22 Identities=27% Similarity=0.483 Sum_probs=19.9
Q ss_pred eEEEEEccCCChHHHHHHHHhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
.+++|.|+.|.|||||.+.+..
T Consensus 26 ei~~iiG~nGaGKSTLl~~l~G 47 (231)
T d1l7vc_ 26 EILHLVGPNGAGKSTLLARMAG 47 (231)
T ss_dssp CEEECBCCTTSSHHHHHHHHHT
T ss_pred CEEEEECCCCCcHHHHHHHHhC
Confidence 5999999999999999988764
No 202
>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=89.74 E-value=0.21 Score=44.45 Aligned_cols=37 Identities=24% Similarity=0.181 Sum_probs=26.4
Q ss_pred eEEEEE-ccCCChHHHHHHHHhhhhhhhccCCceEEEEeC
Q 039283 212 SVVSIK-GLGGVGKTTLAQLVNKDDRVQRHFQIKAWTCVS 250 (600)
Q Consensus 212 ~vv~I~-G~~GiGKTtLA~~v~~~~~~~~~F~~~~wv~vs 250 (600)
++|+|+ +-||+||||+|..+..... ..-..++-++..
T Consensus 3 ~vIav~~~kGGvGKTtia~nLA~~la--~~g~~VlliD~D 40 (237)
T d1g3qa_ 3 RIISIVSGKGGTGKTTVTANLSVALG--DRGRKVLAVDGD 40 (237)
T ss_dssp EEEEEECSSTTSSHHHHHHHHHHHHH--HTTCCEEEEECC
T ss_pred eEEEEECCCCCCcHHHHHHHHHHHHH--hCCCCEEEEeCC
Confidence 688888 7799999999988876433 233356666653
No 203
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Probab=89.73 E-value=0.079 Score=44.28 Aligned_cols=21 Identities=29% Similarity=0.368 Sum_probs=18.5
Q ss_pred EEEEEccCCChHHHHHHHHhh
Q 039283 213 VVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~~ 233 (600)
-|+|+|.+|+|||||..++..
T Consensus 3 kI~lvG~~nvGKSsLin~l~~ 23 (161)
T d2gj8a1 3 KVVIAGRPNAGKSSLLNALAG 23 (161)
T ss_dssp EEEEEESTTSSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 367999999999999998864
No 204
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF6 [TaxId: 9606]}
Probab=89.73 E-value=0.055 Score=46.14 Aligned_cols=24 Identities=25% Similarity=0.369 Sum_probs=19.9
Q ss_pred CceEEEEEccCCChHHHHHHHHhhh
Q 039283 210 GFSVVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 210 ~~~vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
..+ |.|+|.+|+|||||...+.+.
T Consensus 12 ~~k-IvlvG~~~vGKTSli~rl~~~ 35 (173)
T d1e0sa_ 12 EMR-ILMLGLDAAGKTTILYKLKLG 35 (173)
T ss_dssp CEE-EEEEEETTSSHHHHHHHTTCC
T ss_pred eEE-EEEECCCCCCHHHHHHHHhcC
Confidence 445 668999999999999988754
No 205
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain {Bacillus subtilis [TaxId: 1423]}
Probab=89.67 E-value=0.061 Score=46.34 Aligned_cols=21 Identities=38% Similarity=0.569 Sum_probs=18.8
Q ss_pred EEEEEccCCChHHHHHHHHhh
Q 039283 213 VVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~~ 233 (600)
-|+|+|.+|+|||||...+..
T Consensus 3 ~VaiiG~~nvGKSSLin~L~~ 23 (185)
T d1lnza2 3 DVGLVGFPSVGKSTLLSVVSS 23 (185)
T ss_dssp CEEEESSTTSSHHHHHHHSEE
T ss_pred eEEEECCCCCCHHHHHHHHhC
Confidence 489999999999999998864
No 206
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=89.57 E-value=0.13 Score=45.89 Aligned_cols=40 Identities=13% Similarity=0.083 Sum_probs=26.5
Q ss_pred CceEEEEEccCCChHHHHHHHHhhhhhhhccCCceEEEEeC
Q 039283 210 GFSVVSIKGLGGVGKTTLAQLVNKDDRVQRHFQIKAWTCVS 250 (600)
Q Consensus 210 ~~~vv~I~G~~GiGKTtLA~~v~~~~~~~~~F~~~~wv~vs 250 (600)
.-.++.|.|.+|+|||+||.++....... .-..+.|++..
T Consensus 25 ~G~~~~I~G~~G~GKT~la~~~~~~~~~~-~~~~~~~~s~e 64 (242)
T d1tf7a1 25 IGRSTLVSGTSGTGKTLFSIQFLYNGIIE-FDEPGVFVTFE 64 (242)
T ss_dssp TTSEEEEEESTTSSHHHHHHHHHHHHHHH-HCCCEEEEESS
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHHh-cCCCccccccc
Confidence 45799999999999999997765432222 22235565544
No 207
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=89.56 E-value=0.082 Score=45.84 Aligned_cols=21 Identities=24% Similarity=0.374 Sum_probs=18.3
Q ss_pred EEEEEccCCChHHHHHHHHhh
Q 039283 213 VVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~~ 233 (600)
-|.|.|.+|+|||+|...+..
T Consensus 4 Kiv~lG~~~vGKTsll~r~~~ 24 (200)
T d2bcjq2 4 KLLLLGTGESGKSTFIKQMRI 24 (200)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 368999999999999988754
No 208
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.39 E-value=0.089 Score=44.99 Aligned_cols=22 Identities=18% Similarity=0.223 Sum_probs=19.2
Q ss_pred EEEEEccCCChHHHHHHHHhhh
Q 039283 213 VVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
-|+|+|.+|+|||+|...+.+.
T Consensus 7 ki~vlG~~~vGKTsLi~~~~~~ 28 (175)
T d2bmja1 7 RLGVLGDARSGKSSLIHRFLTG 28 (175)
T ss_dssp EEEEECCTTTTHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHhC
Confidence 5789999999999999888664
No 209
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Probab=89.12 E-value=0.068 Score=45.93 Aligned_cols=22 Identities=36% Similarity=0.442 Sum_probs=18.7
Q ss_pred eEEEEEccCCChHHHHHHHHhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
--|.|+|.+|+|||||...+..
T Consensus 18 ~KI~lvG~~~vGKTsLi~~l~~ 39 (182)
T d1moza_ 18 LRILILGLDGAGKTTILYRLQI 39 (182)
T ss_dssp EEEEEEEETTSSHHHHHHHTCC
T ss_pred EEEEEECCCCCCHHHHHHHHhc
Confidence 4466999999999999988754
No 210
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=88.84 E-value=0.1 Score=44.81 Aligned_cols=22 Identities=36% Similarity=0.427 Sum_probs=19.2
Q ss_pred EEEEEccCCChHHHHHHHHhhh
Q 039283 213 VVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
-|+|+|.+|+|||||...+...
T Consensus 10 kV~iiG~~~~GKSTLin~l~~~ 31 (186)
T d1mkya2 10 KVAIVGRPNVGKSTLFNAILNK 31 (186)
T ss_dssp EEEEECSTTSSHHHHHHHHHTS
T ss_pred EEEEECCCCCCHHHHHHHHHCC
Confidence 4789999999999999888753
No 211
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]}
Probab=88.76 E-value=0.13 Score=43.86 Aligned_cols=22 Identities=36% Similarity=0.335 Sum_probs=19.0
Q ss_pred eEEEEEccCCChHHHHHHHHhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
.-|.|.|.+|+||||||..+..
T Consensus 15 ~gvl~~G~sG~GKStlal~l~~ 36 (176)
T d1kkma_ 15 LGVLITGDSGVGKSETALELVQ 36 (176)
T ss_dssp EEEEEECCTTSCHHHHHHHHHH
T ss_pred EEEEEEeCCCCCHHHHHHHHHH
Confidence 5688999999999999977664
No 212
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=88.62 E-value=0.065 Score=45.64 Aligned_cols=22 Identities=32% Similarity=0.398 Sum_probs=8.6
Q ss_pred EEEEEccCCChHHHHHHHHhhh
Q 039283 213 VVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
-|.|+|.+|+|||||+..+..+
T Consensus 8 Ki~vvG~~~vGKTsLi~~l~~~ 29 (173)
T d2fu5c1 8 KLLLIGDSGVGKTCVLFRFSED 29 (173)
T ss_dssp EEEEECCCCC------------
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 3778999999999999877653
No 213
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli [TaxId: 562]}
Probab=88.62 E-value=0.082 Score=45.22 Aligned_cols=25 Identities=20% Similarity=0.242 Sum_probs=21.2
Q ss_pred CCceEEEEEccCCChHHHHHHHHhh
Q 039283 209 DGFSVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 209 ~~~~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
+...-|+|+|.+++|||||.+.+..
T Consensus 14 ~~~~~I~lvG~~NvGKSSL~n~L~~ 38 (188)
T d1puia_ 14 DTGIEVAFAGRSNAGKSSALNTLTN 38 (188)
T ss_dssp SCSEEEEEEECTTSSHHHHHTTTCC
T ss_pred ccCCEEEEECCCCCCHHHHHHHHhC
Confidence 3457799999999999999987754
No 214
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=88.24 E-value=0.14 Score=43.59 Aligned_cols=22 Identities=27% Similarity=0.315 Sum_probs=19.0
Q ss_pred eEEEEEccCCChHHHHHHHHhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
.-|.|.|++|+||||||..+..
T Consensus 16 ~gvli~G~sG~GKS~lal~l~~ 37 (177)
T d1knxa2 16 VGVLLTGRSGIGKSECALDLIN 37 (177)
T ss_dssp EEEEEEESSSSSHHHHHHHHHT
T ss_pred EEEEEEcCCCCCHHHHHHHHHH
Confidence 4688999999999999977764
No 215
>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}
Probab=88.13 E-value=0.15 Score=44.85 Aligned_cols=24 Identities=21% Similarity=0.192 Sum_probs=20.1
Q ss_pred eEEEEEccC-CChHHHHHHHHhhhh
Q 039283 212 SVVSIKGLG-GVGKTTLAQLVNKDD 235 (600)
Q Consensus 212 ~vv~I~G~~-GiGKTtLA~~v~~~~ 235 (600)
+.+.|+|-| |+||||++-.+....
T Consensus 2 ~~~~i~gt~~GVGKTtvs~~La~aL 26 (224)
T d1byia_ 2 KRYFVTGTDTEVGKTVASCALLQAA 26 (224)
T ss_dssp EEEEEEESSTTSCHHHHHHHHHHHH
T ss_pred ceEEEEECCCCccHHHHHHHHHHHH
Confidence 568999998 999999997777643
No 216
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]}
Probab=87.95 E-value=0.13 Score=47.22 Aligned_cols=23 Identities=30% Similarity=0.452 Sum_probs=19.9
Q ss_pred eEEEEEccCCChHHHHHHHHhhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
.+..|+|.+|+|||||+.+++..
T Consensus 30 ~~~~i~G~~G~GKS~l~l~la~~ 52 (274)
T d1nlfa_ 30 TVGALVSPGGAGKSMLALQLAAQ 52 (274)
T ss_dssp SEEEEEESTTSSHHHHHHHHHHH
T ss_pred cEEEEEeCCCCCHHHHHHHHHHH
Confidence 47889999999999999887654
No 217
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]}
Probab=87.78 E-value=0.13 Score=43.41 Aligned_cols=22 Identities=36% Similarity=0.364 Sum_probs=19.0
Q ss_pred eEEEEEccCCChHHHHHHHHhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
.-|.|.|.+|+||||||..+..
T Consensus 16 ~gvli~G~sg~GKS~la~~l~~ 37 (169)
T d1ko7a2 16 VGVLITGDSGIGKSETALELIK 37 (169)
T ss_dssp EEEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEEEeCCCCCHHHHHHHHHH
Confidence 5688999999999999977654
No 218
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit) {Cow (Bos taurus) [TaxId: 9913]}
Probab=87.73 E-value=0.12 Score=45.95 Aligned_cols=22 Identities=23% Similarity=0.377 Sum_probs=18.8
Q ss_pred eEEEEEccCCChHHHHHHHHhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
.-|.|.|.+|+|||||.+.+..
T Consensus 7 ~KilllG~~~vGKTsll~~~~~ 28 (221)
T d1azta2 7 HRLLLLGAGESGKSTIVKQMRI 28 (221)
T ss_dssp EEEEEECSTTSSHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHhc
Confidence 4578999999999999988753
No 219
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}
Probab=87.71 E-value=0.91 Score=44.00 Aligned_cols=96 Identities=11% Similarity=0.166 Sum_probs=52.1
Q ss_pred cccc-chHHHHHHHHhcCCCCCCCCceEEEEEccCCChHHHHHHHHhhhhhhhccCCceEEEEeCCCCCH--HHHHHHHH
Q 039283 187 YGRE-KDKEAIVELLLRDDLRADDGFSVVSIKGLGGVGKTTLAQLVNKDDRVQRHFQIKAWTCVSEDFDV--FTVSKSIL 263 (600)
Q Consensus 187 vGR~-~e~~~l~~~L~~~~~~~~~~~~vv~I~G~~GiGKTtLA~~v~~~~~~~~~F~~~~wv~vs~~~~~--~~~l~~il 263 (600)
.|.. ...+.+.+++.. ...+|.|.|+.|+||||....+.+.. ... ... -+++.++... ..+
T Consensus 140 LG~~~~~~~~l~~l~~~-------~~GliLvtGpTGSGKSTTl~~~l~~~--~~~-~~~-i~tiEdPiE~~~~~~----- 203 (401)
T d1p9ra_ 140 LGMTAHNHDNFRRLIKR-------PHGIILVTGPTGSGKSTTLYAGLQEL--NSS-ERN-ILTVEDPIEFDIDGI----- 203 (401)
T ss_dssp SCCCHHHHHHHHHHHTS-------SSEEEEEECSTTSCHHHHHHHHHHHH--CCT-TSC-EEEEESSCCSCCSSS-----
T ss_pred hcccHHHHHHHHHHHhh-------hhceEEEEcCCCCCccHHHHHHhhhh--cCC-Cce-EEEeccCcccccCCC-----
Confidence 4554 444555555533 34799999999999999988877632 111 111 2344433211 000
Q ss_pred HHhhcCCCCCcccHHHHHHHHHHHhCCCcEEEEEecCCC
Q 039283 264 NSIASDQCTDKDDLNLLQEKLKKQLSGKKFLLVLDDVWN 302 (600)
Q Consensus 264 ~~l~~~~~~~~~~~~~l~~~l~~~L~~k~~LlVlDdv~~ 302 (600)
.+... ...+.....+.++..|+..+=+|++.++.+
T Consensus 204 ~q~~v----~~~~~~~~~~~l~~~lR~dPDvi~igEiRd 238 (401)
T d1p9ra_ 204 GQTQV----NPRVDMTFARGLRAILRQDPDVVMVGEIRD 238 (401)
T ss_dssp EEEEC----BGGGTBCHHHHHHHHGGGCCSEEEESCCCS
T ss_pred Ceeee----cCCcCCCHHHHHHHHHhhcCCEEEecCcCC
Confidence 00000 011111245567777777788888888844
No 220
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]}
Probab=86.65 E-value=0.3 Score=44.44 Aligned_cols=40 Identities=20% Similarity=0.300 Sum_probs=28.4
Q ss_pred chHHHHHHHHhcCCCCCCCCceEEEEEccCCChHHHHHHHHhhh
Q 039283 191 KDKEAIVELLLRDDLRADDGFSVVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 191 ~e~~~l~~~L~~~~~~~~~~~~vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
..+.++.+.+.... ...--|+|+|.+|+|||||...++..
T Consensus 16 ~~l~e~~~~l~~~~----~~~l~I~LvG~tg~GKSSliN~ilg~ 55 (257)
T d1h65a_ 16 TKLLELLGNLKQED----VNSLTILVMGKGGVGKSSTVNSIIGE 55 (257)
T ss_dssp HHHHHHHHHHHHTT----CCEEEEEEEESTTSSHHHHHHHHHTS
T ss_pred HHHHHHHHHHhhcC----CCCcEEEEECCCCCcHHHHHHHHhCC
Confidence 44555666665432 23346779999999999999999864
No 221
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga maritima [TaxId: 2336]}
Probab=86.53 E-value=0.071 Score=44.56 Aligned_cols=21 Identities=33% Similarity=0.430 Sum_probs=18.9
Q ss_pred EEEEccCCChHHHHHHHHhhh
Q 039283 214 VSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 214 v~I~G~~GiGKTtLA~~v~~~ 234 (600)
|+|+|.+|+|||||+..+...
T Consensus 3 I~liG~~n~GKSSLin~l~g~ 23 (160)
T d1xzpa2 3 MVIVGKPNVGKSTLLNRLLNE 23 (160)
T ss_dssp EEEECCHHHHTCHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHhCC
Confidence 789999999999999998753
No 222
>d1tuea_ c.37.1.20 (A:) Replication protein E1 helicase domain {Human papillomavirus type 18 [TaxId: 333761]}
Probab=86.04 E-value=0.32 Score=42.05 Aligned_cols=37 Identities=14% Similarity=0.055 Sum_probs=28.8
Q ss_pred hHHHHHHHHhcCCCCCCCCceEEEEEccCCChHHHHHHHHhh
Q 039283 192 DKEAIVELLLRDDLRADDGFSVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 192 e~~~l~~~L~~~~~~~~~~~~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
-+..+..+|... ++...+.|+|+++.|||++|..+..
T Consensus 39 Fl~~l~~~l~~~-----PKkn~i~~~GP~~TGKS~f~~sl~~ 75 (205)
T d1tuea_ 39 FLGALKSFLKGT-----PKKNCLVFCGPANTGKSYFGMSFIH 75 (205)
T ss_dssp HHHHHHHHHHTC-----TTCSEEEEESCGGGCHHHHHHHHHH
T ss_pred HHHHHHHHHcCC-----CCceEEEEECCCCccHHHHHHHHHH
Confidence 355667777432 4668999999999999999987765
No 223
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=85.64 E-value=0.23 Score=45.66 Aligned_cols=22 Identities=27% Similarity=0.392 Sum_probs=19.1
Q ss_pred eEEEEEccCCChHHHHHHHHhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
++-+|+|..|+|||||..+++.
T Consensus 24 ~ln~IvG~NGsGKStiL~Ai~~ 45 (292)
T g1f2t.1 24 GINLIIGQNGSGKSSLLDAILV 45 (292)
T ss_dssp EEEEEECCTTSSHHHHHHHHHH
T ss_pred CeEEEECCCCCCHHHHHHHHHH
Confidence 5778999999999999988753
No 224
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]}
Probab=85.24 E-value=0.23 Score=46.85 Aligned_cols=21 Identities=33% Similarity=0.349 Sum_probs=19.1
Q ss_pred EEEEEccCCChHHHHHHHHhh
Q 039283 213 VVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~~ 233 (600)
.+.|+|..|+||||+.+.+..
T Consensus 168 nili~G~tgSGKTT~l~al~~ 188 (323)
T d1g6oa_ 168 NVIVCGGTGSGKTTYIKSIME 188 (323)
T ss_dssp CEEEEESTTSSHHHHHHHHGG
T ss_pred CEEEEeeccccchHHHHHHhh
Confidence 488999999999999998876
No 225
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=84.82 E-value=0.21 Score=45.83 Aligned_cols=25 Identities=20% Similarity=0.163 Sum_probs=21.9
Q ss_pred CCceEEEEEccCCChHHHHHHHHhh
Q 039283 209 DGFSVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 209 ~~~~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
.++|-|+|+|..|.|||||+..+..
T Consensus 4 ~~iRni~i~gh~~~GKTtL~e~ll~ 28 (276)
T d2bv3a2 4 KRLRNIGIAAHIDAGKTTTTERILY 28 (276)
T ss_dssp GGEEEEEEEECTTSCHHHHHHHHHH
T ss_pred hhceEEEEEeCCCCCHHHHHHHHHH
Confidence 3578899999999999999988865
No 226
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=83.91 E-value=0.14 Score=45.61 Aligned_cols=21 Identities=29% Similarity=0.533 Sum_probs=18.1
Q ss_pred EEEEEccCCChHHHHHHHHhh
Q 039283 213 VVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~~ 233 (600)
..++.|.+|+|||||...+..
T Consensus 99 ~~vl~G~SGVGKSSLiN~L~~ 119 (231)
T d1t9ha2 99 TTVFAGQSGVGKSSLLNAISP 119 (231)
T ss_dssp EEEEEESHHHHHHHHHHHHCC
T ss_pred eEEEECCCCccHHHHHHhhcc
Confidence 556889999999999988864
No 227
>d2dy1a2 c.37.1.8 (A:8-274) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus, EF-G-2 [TaxId: 274]}
Probab=83.23 E-value=0.31 Score=44.48 Aligned_cols=22 Identities=36% Similarity=0.545 Sum_probs=19.7
Q ss_pred ceEEEEEccCCChHHHHHHHHh
Q 039283 211 FSVVSIKGLGGVGKTTLAQLVN 232 (600)
Q Consensus 211 ~~vv~I~G~~GiGKTtLA~~v~ 232 (600)
+|-|+|.|..|.|||||+..+.
T Consensus 2 iRNv~iiGh~~~GKTtL~e~ll 23 (267)
T d2dy1a2 2 IRTVALVGHAGSGKTTLTEALL 23 (267)
T ss_dssp EEEEEEEESTTSSHHHHHHHHH
T ss_pred eeEEEEEcCCCCcHHHHHHHHH
Confidence 4779999999999999998874
No 228
>d2fz4a1 c.37.1.19 (A:24-229) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=82.74 E-value=5 Score=34.29 Aligned_cols=111 Identities=15% Similarity=0.164 Sum_probs=56.4
Q ss_pred ccccccchHHHHHHHHhcCCCCCCCCceEEEEEccCCChHHHHHHHHhhhhhhhccCCceEEEEeCCCCCHHHHHHHHHH
Q 039283 185 EVYGREKDKEAIVELLLRDDLRADDGFSVVSIKGLGGVGKTTLAQLVNKDDRVQRHFQIKAWTCVSEDFDVFTVSKSILN 264 (600)
Q Consensus 185 ~~vGR~~e~~~l~~~L~~~~~~~~~~~~vv~I~G~~GiGKTtLA~~v~~~~~~~~~F~~~~wv~vs~~~~~~~~l~~il~ 264 (600)
.+--|+-+.+.+..++.. + -..|+++.|.|||.+|-.+... +...+.+-+.. ..+..+..+
T Consensus 68 ~~~Lr~yQ~eav~~~~~~-------~--~~ll~~~tG~GKT~~a~~~~~~------~~~~~Liv~p~----~~L~~q~~~ 128 (206)
T d2fz4a1 68 EISLRDYQEKALERWLVD-------K--RGCIVLPTGSGKTHVAMAAINE------LSTPTLIVVPT----LALAEQWKE 128 (206)
T ss_dssp CCCCCHHHHHHHHHHTTT-------S--EEEEEESSSTTHHHHHHHHHHH------SCSCEEEEESS----HHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHhC-------C--CcEEEeCCCCCceehHHhHHHH------hcCceeEEEcc----cchHHHHHH
Confidence 345677777777666521 1 2347789999999888665532 22333333321 223333433
Q ss_pred Hhhc---CC---------CC---CcccHHHHHHHHHHHhCCCcEEEEEecCCCCChhhHHhhcCCC
Q 039283 265 SIAS---DQ---------CT---DKDDLNLLQEKLKKQLSGKKFLLVLDDVWNENYNSWRALSCPF 315 (600)
Q Consensus 265 ~l~~---~~---------~~---~~~~~~~l~~~l~~~L~~k~~LlVlDdv~~~~~~~~~~l~~~l 315 (600)
.+.. .. .. .....+.+..... .+.++--+||+|.++......|..+...+
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~i~i~t~~~~~~~~~-~~~~~~~lvIiDEaH~~~a~~~~~i~~~~ 193 (206)
T d2fz4a1 129 RLGIFGEEYVGEFSGRIKELKPLTVSTYDSAYVNAE-KLGNRFMLLIFDEVHHLPAESYVQIAQMS 193 (206)
T ss_dssp HHGGGCGGGEEEESSSCBCCCSEEEEEHHHHHHTHH-HHTTTCSEEEEECSSCCCTTTHHHHHHTC
T ss_pred HHHhhcccchhhcccccccccccccceehhhhhhhH-hhCCcCCEEEEECCeeCCcHHHHHHHhcc
Confidence 3321 10 00 1122333322222 22333338999999876555676665544
No 229
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4 [TaxId: 10331]}
Probab=81.93 E-value=0.37 Score=45.53 Aligned_cols=24 Identities=21% Similarity=0.473 Sum_probs=20.7
Q ss_pred ceEEEEEccCCChHHHHHHHHhhh
Q 039283 211 FSVVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 211 ~~vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
+-.|.|-|+-|+||||+++.+.+.
T Consensus 6 ~~rI~iEG~iGsGKSTl~~~L~~~ 29 (333)
T d1p6xa_ 6 IVRIYLDGVYGIGKSTTGRVMASA 29 (333)
T ss_dssp EEEEEEECSTTSSHHHHHHHHHSG
T ss_pred eEEEEEECCccCCHHHHHHHHHHH
Confidence 456788999999999999999874
No 230
>d1u0ja_ c.37.1.20 (A:) Rep 40 protein helicase domain {Adeno-associated virus 2, AAV2 [TaxId: 10804]}
Probab=81.51 E-value=0.74 Score=41.87 Aligned_cols=35 Identities=14% Similarity=0.185 Sum_probs=26.2
Q ss_pred HHHHHHhcCCCCCCCCceEEEEEccCCChHHHHHHHHhh
Q 039283 195 AIVELLLRDDLRADDGFSVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 195 ~l~~~L~~~~~~~~~~~~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
.+..+|... .+....+.++|+|+.|||+++..+..
T Consensus 92 ~l~~~L~~~----~~k~n~~~l~G~~~tGKS~f~~~i~~ 126 (267)
T d1u0ja_ 92 VFLGWATKK----FGKRNTIWLFGPATTGKTNIAEAIAH 126 (267)
T ss_dssp HHHHHHTTC----STTCCEEEEECSTTSSHHHHHHHHHH
T ss_pred HHHHHHcCC----CCccEEEEEEcCCCCCHHHHHHHHHH
Confidence 445555332 24667899999999999999988765
No 231
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal (G) domain {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=81.33 E-value=0.4 Score=42.60 Aligned_cols=23 Identities=35% Similarity=0.421 Sum_probs=20.2
Q ss_pred eEEEEEccCCChHHHHHHHHhhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
++|+|.|-.++|||||+..+...
T Consensus 6 p~IaIiGh~d~GKSTL~~~L~~~ 28 (227)
T d1g7sa4 6 PIVSVLGHVDHGKTTLLDHIRGS 28 (227)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHH
T ss_pred CEEEEEeCCCccHHHHHHHHHhh
Confidence 57999999999999999888653
No 232
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=81.20 E-value=0.68 Score=43.07 Aligned_cols=15 Identities=33% Similarity=0.383 Sum_probs=13.0
Q ss_pred EEEEccCCChHHHHH
Q 039283 214 VSIKGLGGVGKTTLA 228 (600)
Q Consensus 214 v~I~G~~GiGKTtLA 228 (600)
+.|.|.+|+||||.+
T Consensus 27 ~lV~g~aGSGKTt~l 41 (318)
T d1pjra1 27 LLIMAGAGSGKTRVL 41 (318)
T ss_dssp EEEEECTTSCHHHHH
T ss_pred EEEEecCCccHHHHH
Confidence 678899999999765
No 233
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]}
Probab=81.11 E-value=0.67 Score=42.69 Aligned_cols=16 Identities=25% Similarity=0.260 Sum_probs=13.4
Q ss_pred EEEEEccCCChHHHHH
Q 039283 213 VVSIKGLGGVGKTTLA 228 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA 228 (600)
.+.|.|.+|+||||.+
T Consensus 16 ~~lI~g~aGTGKTt~l 31 (306)
T d1uaaa1 16 PCLVLAGAGSGKTRVI 31 (306)
T ss_dssp EEEECCCTTSCHHHHH
T ss_pred CEEEEeeCCccHHHHH
Confidence 4678999999999754
No 234
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type 1, different strains [TaxId: 10298]}
Probab=80.87 E-value=0.34 Score=45.63 Aligned_cols=23 Identities=43% Similarity=0.508 Sum_probs=20.0
Q ss_pred ceEEEEEccCCChHHHHHHHHhh
Q 039283 211 FSVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 211 ~~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
+..|.|-|.-|+||||+++.+.+
T Consensus 4 ~lrI~IEG~iGsGKTTl~~~La~ 26 (329)
T d1e2ka_ 4 LLRVYIDGPHGMGKTTTTQLLVA 26 (329)
T ss_dssp EEEEEECSCTTSSHHHHHHHHTC
T ss_pred ceEEEEECCcCCCHHHHHHHHHH
Confidence 34588999999999999998875
No 235
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=80.26 E-value=0.48 Score=44.37 Aligned_cols=22 Identities=27% Similarity=0.392 Sum_probs=19.1
Q ss_pred eEEEEEccCCChHHHHHHHHhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
.+.+|+|+.|+||||+..+++.
T Consensus 24 ~~~vi~G~NgsGKTtileAI~~ 45 (369)
T g1ii8.1 24 GINLIIGQNGSGKSSLLDAILV 45 (369)
T ss_dssp EEEEEECCTTSSHHHHHHHHHH
T ss_pred CeEEEECCCCCCHHHHHHHHHH
Confidence 5778999999999999988853
No 236
>d1f5na2 c.37.1.8 (A:7-283) Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=80.05 E-value=0.76 Score=42.07 Aligned_cols=25 Identities=32% Similarity=0.367 Sum_probs=22.9
Q ss_pred CCceEEEEEccCCChHHHHHHHHhh
Q 039283 209 DGFSVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 209 ~~~~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
+++.||+|+|+-+.|||+|+..++.
T Consensus 30 ~~v~vvsi~G~~~sGKS~llN~l~~ 54 (277)
T d1f5na2 30 QPMVVVAIVGLYRTGKSYLMNKLAG 54 (277)
T ss_dssp SBEEEEEEEEBTTSSHHHHHHHHTT
T ss_pred CCEEEEEEECCCCCCHHHHHHHHcC
Confidence 4689999999999999999999875
No 237
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal domain {Methanococcus maripaludis [TaxId: 39152]}
Probab=79.11 E-value=0.46 Score=40.27 Aligned_cols=21 Identities=33% Similarity=0.409 Sum_probs=19.0
Q ss_pred EEEEEccCCChHHHHHHHHhh
Q 039283 213 VVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~~ 233 (600)
-|+|+|.+++|||||...+..
T Consensus 7 nIaiiG~~naGKSTL~n~L~~ 27 (179)
T d1wb1a4 7 NLGIFGHIDHGKTTLSKVLTE 27 (179)
T ss_dssp EEEEEECTTSSHHHHHHHHHT
T ss_pred EEEEEeCCCCcHHHHHHHHHH
Confidence 589999999999999998864
No 238
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli [TaxId: 562]}
Probab=77.89 E-value=0.24 Score=42.65 Aligned_cols=21 Identities=29% Similarity=0.406 Sum_probs=18.3
Q ss_pred EEEEEccCCChHHHHHHHHhh
Q 039283 213 VVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~~ 233 (600)
+.+|+|+.|+||||+..++..
T Consensus 26 ~tvi~G~NGsGKStil~Ai~~ 46 (222)
T d1qhla_ 26 VTTLSGGNGAGKSTTMAAFVT 46 (222)
T ss_dssp HHHHHSCCSHHHHHHHHHHHH
T ss_pred eEEEECCCCCCHHHHHHHHHH
Confidence 567899999999999988864
No 239
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus [TaxId: 10335]}
Probab=77.63 E-value=0.47 Score=44.70 Aligned_cols=23 Identities=30% Similarity=0.356 Sum_probs=20.0
Q ss_pred eEEEEEccCCChHHHHHHHHhhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
-.|+|-|.-|+||||+++.+.+.
T Consensus 6 lrI~IEG~iGsGKSTl~~~L~~~ 28 (331)
T d1osna_ 6 LRIYLDGAYGIGKTTAAEEFLHH 28 (331)
T ss_dssp EEEEEEESSSSCTTHHHHHHHHT
T ss_pred eEEEEECCCCCCHHHHHHHHHHH
Confidence 35789999999999999998764
No 240
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus [TaxId: 2261]}
Probab=77.15 E-value=0.52 Score=44.13 Aligned_cols=22 Identities=23% Similarity=0.409 Sum_probs=19.3
Q ss_pred eEEEEEccCCChHHHHHHHHhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
.+-+|+|+.|+||||+..++..
T Consensus 27 ~lnvi~G~NGsGKS~il~AI~~ 48 (329)
T g1xew.1 27 GFTAIVGANGSGKSNIGDAILF 48 (329)
T ss_dssp SEEEEEECTTSSSHHHHHHHHH
T ss_pred CeEEEECCCCCCHHHHHHHHHH
Confidence 4778999999999999988754
No 241
>d1jala1 c.37.1.8 (A:1-278) YchF GTP-binding protein N-terminal domain {Haemophilus influenzae [TaxId: 727]}
Probab=76.68 E-value=0.62 Score=42.72 Aligned_cols=22 Identities=41% Similarity=0.516 Sum_probs=19.5
Q ss_pred EEEEEccCCChHHHHHHHHhhh
Q 039283 213 VVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
-|+|+|.+.+|||||-..+-+.
T Consensus 4 ~~GivG~Pn~GKSTlf~~lt~~ 25 (278)
T d1jala1 4 KCGIVGLPNVGKSTLFNALTKA 25 (278)
T ss_dssp EEEEECCTTSSHHHHHHHHHHT
T ss_pred eEEEECCCCCCHHHHHHHHHCC
Confidence 5899999999999999888754
No 242
>d1n0ua2 c.37.1.8 (A:3-343) Elongation factor 2 (eEF-2), N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=76.66 E-value=0.77 Score=43.34 Aligned_cols=35 Identities=17% Similarity=0.196 Sum_probs=26.5
Q ss_pred HHHHHHHhcCCCCCCCCceEEEEEccCCChHHHHHHHHhh
Q 039283 194 EAIVELLLRDDLRADDGFSVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 194 ~~l~~~L~~~~~~~~~~~~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
+.|.++.... ..+|-|+|+|..|.|||||+..+..
T Consensus 5 ~~~~~lm~~~-----~~IRNI~iiGhvd~GKTTL~d~Ll~ 39 (341)
T d1n0ua2 5 DQMRSLMDKV-----TNVRNMSVIAHVDHGKSTLTDSLVQ 39 (341)
T ss_dssp HHHHHHHHCG-----GGEEEEEEECCGGGTHHHHHHHHHH
T ss_pred HHHHHHhcCc-----ccCcEEEEEeCCCCcHHHHHHHHHH
Confidence 4455554332 4688899999999999999988764
No 243
>d1wxqa1 c.37.1.8 (A:1-319) GTP-binding protein PH0525 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=72.32 E-value=0.84 Score=42.63 Aligned_cols=29 Identities=21% Similarity=0.279 Sum_probs=18.6
Q ss_pred EEEEccCCChHHHHHHHHhhhhhhhccCC
Q 039283 214 VSIKGLGGVGKTTLAQLVNKDDRVQRHFQ 242 (600)
Q Consensus 214 v~I~G~~GiGKTtLA~~v~~~~~~~~~F~ 242 (600)
|+|+|.+.+|||||-..+-........|+
T Consensus 3 v~lvG~pn~GKStlfn~lt~~~~~v~nyp 31 (319)
T d1wxqa1 3 IGVVGKPNVGKSTFFSAATLVDVEIANYP 31 (319)
T ss_dssp EEEEECTTSSHHHHHHHHHC---------
T ss_pred EeEECCCCCCHHHHHHHHHCCCCchhcCC
Confidence 79999999999999998866433233443
No 244
>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=72.32 E-value=0.97 Score=39.19 Aligned_cols=21 Identities=33% Similarity=0.265 Sum_probs=18.4
Q ss_pred EEEEEccCCChHHHHHHHHhh
Q 039283 213 VVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~~ 233 (600)
-|+|.|-.+.|||||+.++..
T Consensus 5 ni~iiGhvd~GKSTL~~~Ll~ 25 (204)
T d2c78a3 5 NVGTIGHVDHGKTTLTAALTY 25 (204)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEEeCCCCcHHHHHHHHHH
Confidence 488999999999999988754
No 245
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=72.27 E-value=0.85 Score=44.22 Aligned_cols=22 Identities=23% Similarity=0.397 Sum_probs=19.5
Q ss_pred eEEEEEccCCChHHHHHHHHhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
--|+|+|.+|+|||||...+..
T Consensus 57 l~Iai~G~~n~GKSSLiNaL~G 78 (400)
T d1tq4a_ 57 LNVAVTGETGSGKSSFINTLRG 78 (400)
T ss_dssp EEEEEEECTTSSHHHHHHHHHT
T ss_pred cEEEEECCCCCCHHHHHHHHhC
Confidence 4589999999999999998864
No 246
>d1ni3a1 c.37.1.8 (A:11-306) YchF GTP-binding protein N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=70.21 E-value=1.1 Score=41.25 Aligned_cols=22 Identities=32% Similarity=0.511 Sum_probs=19.8
Q ss_pred EEEEEccCCChHHHHHHHHhhh
Q 039283 213 VVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
-|+|+|.+.+|||||-.++-..
T Consensus 12 kiGivG~Pn~GKSTlfnalT~~ 33 (296)
T d1ni3a1 12 KTGIVGMPNVGKSTFFRAITKS 33 (296)
T ss_dssp EEEEEECSSSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHCC
Confidence 5999999999999999988764
No 247
>d1puja_ c.37.1.8 (A:) Probable GTPase YlqF {Bacillus subtilis [TaxId: 1423]}
Probab=69.42 E-value=2.6 Score=38.14 Aligned_cols=24 Identities=33% Similarity=0.343 Sum_probs=20.7
Q ss_pred CceEEEEEccCCChHHHHHHHHhh
Q 039283 210 GFSVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 210 ~~~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
..-.|+|+|++.+|||||+..+..
T Consensus 111 ~~~~v~vvG~PNvGKSsliN~L~~ 134 (273)
T d1puja_ 111 RAIRALIIGIPNVGKSTLINRLAK 134 (273)
T ss_dssp CCEEEEEEESTTSSHHHHHHHHHT
T ss_pred CceEEEEEecCccchhhhhhhhhc
Confidence 445689999999999999988875
No 248
>d1g8fa3 c.37.1.15 (A:390-511) ATP sulfurylase C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=68.44 E-value=1.4 Score=34.29 Aligned_cols=22 Identities=9% Similarity=0.004 Sum_probs=19.4
Q ss_pred eEEEEEccCCChHHHHHHHHhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
-.|.+.|..|.||+|||..+..
T Consensus 7 f~i~~tg~~~~gk~~ia~al~~ 28 (122)
T d1g8fa3 7 FSIVLGNSLTVSREQLSIALLS 28 (122)
T ss_dssp EEEEECTTCCSCHHHHHHHHHH
T ss_pred eEEEEeCCCCCCHHHHHHHHHH
Confidence 4788999999999999988764
No 249
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]}
Probab=67.84 E-value=1.1 Score=41.31 Aligned_cols=22 Identities=27% Similarity=0.468 Sum_probs=18.9
Q ss_pred eEEEEEccCCChHHHHHHHHhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
++-+|+|+.|+|||++..++..
T Consensus 25 ~lnvlvG~NgsGKS~iL~Ai~~ 46 (308)
T d1e69a_ 25 RVTAIVGPNGSGKSNIIDAIKW 46 (308)
T ss_dssp SEEEEECCTTTCSTHHHHHHHH
T ss_pred CeEEEECCCCCcHHHHHHHHHH
Confidence 4778999999999999887753
No 250
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=64.74 E-value=1.7 Score=41.74 Aligned_cols=22 Identities=27% Similarity=0.451 Sum_probs=19.0
Q ss_pred eEEEEEccCCChHHHHHHHHhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
.+-+|+|+.|+|||++..++..
T Consensus 26 ~l~~i~G~NGsGKS~ileAi~~ 47 (427)
T d1w1wa_ 26 NFTSIIGPNGSGKSNMMDAISF 47 (427)
T ss_dssp SEEEEECSTTSSHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHH
Confidence 4678999999999999988854
No 251
>d1wb9a2 c.37.1.12 (A:567-800) DNA repair protein MutS, the C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=61.03 E-value=2.6 Score=37.14 Aligned_cols=24 Identities=21% Similarity=0.099 Sum_probs=20.9
Q ss_pred ceEEEEEccCCChHHHHHHHHhhh
Q 039283 211 FSVVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 211 ~~vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
.+++.|+|+.+.||||+.+.+.-.
T Consensus 41 ~~~~iiTGpN~~GKSt~lk~i~l~ 64 (234)
T d1wb9a2 41 RRMLIITGPNMGGKSTYMRQTALI 64 (234)
T ss_dssp SCEEEEECCTTSSHHHHHHHHHHH
T ss_pred ceEEEEeccCchhhHHHHHHHHHH
Confidence 478999999999999999988653
No 252
>d1g5ta_ c.37.1.11 (A:) ATP:corrinoid adenosyltransferase CobA {Salmonella typhimurium [TaxId: 90371]}
Probab=60.43 E-value=5.2 Score=32.64 Aligned_cols=47 Identities=19% Similarity=0.289 Sum_probs=27.6
Q ss_pred HHHhCCC-cEEEEEecCCC---CChhhHHhhcCCCCCCCCCcEEEEeccCh
Q 039283 285 KKQLSGK-KFLLVLDDVWN---ENYNSWRALSCPFGAGASGSKIVVTHRNQ 331 (600)
Q Consensus 285 ~~~L~~k-~~LlVlDdv~~---~~~~~~~~l~~~l~~~~~gs~IlvTtR~~ 331 (600)
++.+.+. -=|||||.+-. ...-..+++...+.....+.-+|+|-|+.
T Consensus 87 ~~~~~~~~~dllILDEi~~Ai~~gli~~~~v~~ll~~rp~~~evVlTGr~~ 137 (157)
T d1g5ta_ 87 KRMLADPLLDMVVLDELTYMVAYDYLPLEEVISALNARPGHQTVIITGRGC 137 (157)
T ss_dssp HHHTTCTTCSEEEEETHHHHHHTTSSCHHHHHHHHHTSCTTCEEEEECSSC
T ss_pred HHHhhcCccCEEeHHHHHHHHHcCCCCHHHHHHHHHhCCCCCEEEEECCCC
Confidence 4444444 44999999821 11122334444444445678999999975
No 253
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=60.34 E-value=2.6 Score=32.98 Aligned_cols=18 Identities=22% Similarity=0.093 Sum_probs=15.1
Q ss_pred eEEEEEccCCChHHHHHH
Q 039283 212 SVVSIKGLGGVGKTTLAQ 229 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~ 229 (600)
+.+.|+++.|.|||..|-
T Consensus 8 ~~~il~~~tGsGKT~~~~ 25 (140)
T d1yksa1 8 MTTVLDFHPGAGKTRRFL 25 (140)
T ss_dssp CEEEECCCTTSSTTTTHH
T ss_pred CcEEEEcCCCCChhHHHH
Confidence 577899999999997663
No 254
>d2olra1 c.91.1.1 (A:228-540) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Escherichia coli [TaxId: 562]}
Probab=59.68 E-value=2.1 Score=39.37 Aligned_cols=17 Identities=53% Similarity=0.749 Sum_probs=15.2
Q ss_pred eEEEEEccCCChHHHHH
Q 039283 212 SVVSIKGLGGVGKTTLA 228 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA 228 (600)
.+..+.|.+|.|||||.
T Consensus 15 ~~alfFGLSGTGKTTLs 31 (313)
T d2olra1 15 DVAVFFGLSGTGKTTLS 31 (313)
T ss_dssp CEEEEECSTTSSHHHHH
T ss_pred CEEEEEccCCCCcccce
Confidence 46679999999999998
No 255
>d1j3ba1 c.91.1.1 (A:212-529) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Thermus thermophilus [TaxId: 274]}
Probab=58.76 E-value=2.3 Score=39.22 Aligned_cols=17 Identities=53% Similarity=0.749 Sum_probs=15.4
Q ss_pred eEEEEEccCCChHHHHH
Q 039283 212 SVVSIKGLGGVGKTTLA 228 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA 228 (600)
.+....|.+|.|||||.
T Consensus 15 ~valffGLSGTGKTTLs 31 (318)
T d1j3ba1 15 DVAVFFGLSGTGKTTLS 31 (318)
T ss_dssp CEEEEEECTTSCHHHHT
T ss_pred CEEEEEccCCCCccccc
Confidence 46789999999999998
No 256
>d2akab1 c.37.1.8 (B:6-304) Dynamin G domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=58.25 E-value=5.6 Score=36.10 Aligned_cols=26 Identities=12% Similarity=0.167 Sum_probs=22.1
Q ss_pred CCceEEEEEccCCChHHHHHHHHhhh
Q 039283 209 DGFSVVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 209 ~~~~vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
-..+-|+|+|.-+.|||||...+...
T Consensus 24 ~~~P~ivvvG~~SsGKSsliNaLlg~ 49 (299)
T d2akab1 24 LDLPQIAVVGGQSAGKSSVLENFVGR 49 (299)
T ss_dssp CCCCEEEEEEBTTSCHHHHHHHHHTS
T ss_pred CCCCeEEEEcCCCCCHHHHHHHHhCC
Confidence 34567889999999999999999764
No 257
>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}
Probab=57.18 E-value=4.1 Score=30.16 Aligned_cols=24 Identities=21% Similarity=0.517 Sum_probs=20.3
Q ss_pred CceEEEEEccCCChHHHHHHHHhh
Q 039283 210 GFSVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 210 ~~~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
..+-+-+.|.||+|.+.||+.+..
T Consensus 7 ~~~~ihfiGigG~GMs~LA~~L~~ 30 (96)
T d1p3da1 7 RVQQIHFIGIGGAGMSGIAEILLN 30 (96)
T ss_dssp TCCEEEEETTTSTTHHHHHHHHHH
T ss_pred hCCEEEEEEECHHHHHHHHHHHHh
Confidence 456789999999999999977654
No 258
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]}
Probab=56.44 E-value=2.6 Score=40.82 Aligned_cols=22 Identities=23% Similarity=0.373 Sum_probs=18.5
Q ss_pred eEEEEEccCCChHHHHHHHHhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
+.+.|+|..|+|||+++..+..
T Consensus 51 ~H~~I~G~tGsGKT~~l~~li~ 72 (433)
T d1e9ra_ 51 RHLLVNGATGTGKSVLLRELAY 72 (433)
T ss_dssp GCEEEEECTTSSHHHHHHHHHH
T ss_pred ceEEEEeCCCCcHHHHHHHHHH
Confidence 4689999999999998876654
No 259
>d1d2ea3 c.37.1.8 (A:55-250) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Cow (Bos taurus), mitochondrial [TaxId: 9913]}
Probab=56.16 E-value=2.9 Score=35.71 Aligned_cols=21 Identities=38% Similarity=0.370 Sum_probs=18.2
Q ss_pred EEEEEccCCChHHHHHHHHhh
Q 039283 213 VVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~~ 233 (600)
-|+|.|-.+.|||||+.++..
T Consensus 5 ni~iiGHvd~GKSTL~~~l~~ 25 (196)
T d1d2ea3 5 NVGTIGHVDHGKTTLTAAITK 25 (196)
T ss_dssp EEEEESSTTSSHHHHHHHHHH
T ss_pred EEEEEeCCCCcHHHHHHHHHH
Confidence 488999999999999987753
No 260
>d1ii2a1 c.91.1.1 (A:201-523) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Trypanosoma cruzi [TaxId: 5693]}
Probab=55.69 E-value=2.6 Score=38.82 Aligned_cols=17 Identities=53% Similarity=0.747 Sum_probs=15.0
Q ss_pred eEEEEEccCCChHHHHH
Q 039283 212 SVVSIKGLGGVGKTTLA 228 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA 228 (600)
.+..+.|.+|.|||||.
T Consensus 15 d~alfFGLSGTGKTTLs 31 (323)
T d1ii2a1 15 DVTVFFGLSGTGKTTLS 31 (323)
T ss_dssp CEEEEECCTTSSHHHHH
T ss_pred CEEEEEccCCCCcccce
Confidence 35679999999999999
No 261
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=55.22 E-value=27 Score=30.14 Aligned_cols=39 Identities=18% Similarity=0.071 Sum_probs=28.1
Q ss_pred ccchHHHHHHHHhcCCCCCCCCceEEEEEccCCChHHHHHHHHhh
Q 039283 189 REKDKEAIVELLLRDDLRADDGFSVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 189 R~~e~~~l~~~L~~~~~~~~~~~~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
.....+++.+.+.. +......|+|..|+|||-++-....
T Consensus 60 Q~~~~~~i~~~~~~------~~~~~~LL~GdvGsGKT~V~~~a~~ 98 (233)
T d2eyqa3 60 QAQAINAVLSDMCQ------PLAMDRLVCGDVGFGKTEVAMRAAF 98 (233)
T ss_dssp HHHHHHHHHHHHHS------SSCCEEEEECCCCTTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc------cCccCeEEEcCCCCCcHHHHHHHHH
Confidence 44556667776643 3456888999999999999855544
No 262
>d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=55.16 E-value=5.9 Score=33.53 Aligned_cols=17 Identities=29% Similarity=0.251 Sum_probs=14.4
Q ss_pred EEEEEccCCChHHHHHH
Q 039283 213 VVSIKGLGGVGKTTLAQ 229 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~ 229 (600)
-+.|.++.|.|||+.|.
T Consensus 42 ~~il~apTGsGKT~~a~ 58 (202)
T d2p6ra3 42 NLLLAMPTAAGKTLLAE 58 (202)
T ss_dssp CEEEECSSHHHHHHHHH
T ss_pred CEEEEcCCCCchhHHHH
Confidence 36799999999998874
No 263
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus type 2 [TaxId: 11060]}
Probab=53.34 E-value=12 Score=33.37 Aligned_cols=51 Identities=12% Similarity=0.112 Sum_probs=27.7
Q ss_pred ceEEEEEccCCChHHHH-HHHHhhhhhhhccCCceEEEEeCCCCCHHHHHHHHHHHhhc
Q 039283 211 FSVVSIKGLGGVGKTTL-AQLVNKDDRVQRHFQIKAWTCVSEDFDVFTVSKSILNSIAS 268 (600)
Q Consensus 211 ~~vv~I~G~~GiGKTtL-A~~v~~~~~~~~~F~~~~wv~vs~~~~~~~~l~~il~~l~~ 268 (600)
-+.+.|.++.|+|||+. +..+.... .... ..++++. ....+..++.+.+..
T Consensus 9 ~~~~lv~~~TGsGKT~~~l~~~~~~~-~~~~-~~~lvi~-----Ptr~La~q~~~~l~~ 60 (305)
T d2bmfa2 9 KRLTIMDLHPGAGKTKRYLPAIVREA-IKRG-LRTLILA-----PTRVVAAEMEEALRG 60 (305)
T ss_dssp TCEEEECCCTTSSTTTTHHHHHHHHH-HHHT-CCEEEEE-----SSHHHHHHHHHHTTT
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHHH-HhcC-CEEEEEc-----cHHHHHHHHHHHHhc
Confidence 35788999999999952 22232211 1111 1233432 245566666666643
No 264
>d1kk1a3 c.37.1.8 (A:6-200) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Archaeon Pyrococcus abyssi [TaxId: 29292]}
Probab=50.99 E-value=3.9 Score=34.58 Aligned_cols=20 Identities=30% Similarity=0.395 Sum_probs=17.8
Q ss_pred EEEEEccCCChHHHHHHHHh
Q 039283 213 VVSIKGLGGVGKTTLAQLVN 232 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~ 232 (600)
-|+|.|-...|||||+..+.
T Consensus 7 nIaiiGhvd~GKSTL~~~L~ 26 (195)
T d1kk1a3 7 NIGMVGHVDHGKTTLTKALT 26 (195)
T ss_dssp EEEEECSTTSSHHHHHHHHH
T ss_pred EEEEEeccCCcHHHHHHHHH
Confidence 47899999999999998885
No 265
>d1jnya3 c.37.1.8 (A:4-227) Elongation factor eEF-1alpha, N-terminal (G) domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=50.33 E-value=4.1 Score=35.41 Aligned_cols=21 Identities=24% Similarity=0.167 Sum_probs=18.1
Q ss_pred EEEEEccCCChHHHHHHHHhh
Q 039283 213 VVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~~ 233 (600)
-|+|.|--+.|||||+..+..
T Consensus 5 Ni~viGHVd~GKTTL~~~Ll~ 25 (224)
T d1jnya3 5 NLIVIGHVDHGKSTLVGRLLM 25 (224)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEEecCCCCHHHHHHHHHH
Confidence 478999999999999987754
No 266
>d1hv8a1 c.37.1.19 (A:3-210) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=49.00 E-value=16 Score=30.87 Aligned_cols=19 Identities=21% Similarity=0.225 Sum_probs=14.6
Q ss_pred EEEEEccCCChHHHHHHHH
Q 039283 213 VVSIKGLGGVGKTTLAQLV 231 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v 231 (600)
-+.+..+.|.|||..+...
T Consensus 44 d~iv~a~TGsGKT~~~~l~ 62 (208)
T d1hv8a1 44 NIVAQARTGSGKTASFAIP 62 (208)
T ss_dssp EEEEECCSSSSHHHHHHHH
T ss_pred Ceeeechhcccccceeecc
Confidence 4678899999999866433
No 267
>g1qhh.1 c.37.1.19 (A:,B:,C:,D:) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=47.15 E-value=3.5 Score=41.83 Aligned_cols=15 Identities=33% Similarity=0.383 Sum_probs=12.4
Q ss_pred EEEEccCCChHHHHH
Q 039283 214 VSIKGLGGVGKTTLA 228 (600)
Q Consensus 214 v~I~G~~GiGKTtLA 228 (600)
+.|.|.+|+||||.+
T Consensus 27 ~lV~A~AGSGKT~~l 41 (623)
T g1qhh.1 27 LLIMAGAGSGKTRVL 41 (623)
T ss_dssp EEEEECTTSCHHHHH
T ss_pred EEEEEeCchHHHHHH
Confidence 566699999999766
No 268
>d1zunb3 c.37.1.8 (B:16-237) Sulfate adenylate transferase subunit cysN/C, EF-Tu domain G-like domain {Pseudomonas syringae pv. tomato [TaxId: 323]}
Probab=46.62 E-value=6.1 Score=34.30 Aligned_cols=23 Identities=22% Similarity=0.043 Sum_probs=19.2
Q ss_pred ceEEEEEccCCChHHHHHHHHhh
Q 039283 211 FSVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 211 ~~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
.--++|+|-...|||||+.++..
T Consensus 9 ~~~i~viGHVd~GKSTL~~~Ll~ 31 (222)
T d1zunb3 9 MLRFLTCGNVDDGKSTLIGRLLH 31 (222)
T ss_dssp EEEEEEECCTTSSHHHHHHHHHH
T ss_pred cceEEEEcCCCCCHHHHHHHHHH
Confidence 34478889999999999988864
No 269
>d2qn6a3 c.37.1.8 (A:2-206) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Sulfolobus solfataricus [TaxId: 2287]}
Probab=46.13 E-value=5.1 Score=34.13 Aligned_cols=21 Identities=33% Similarity=0.400 Sum_probs=18.6
Q ss_pred EEEEEccCCChHHHHHHHHhh
Q 039283 213 VVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~~ 233 (600)
.|+|.|-...|||||+..+..
T Consensus 10 ni~iiGhVd~GKSTL~~~L~~ 30 (205)
T d2qn6a3 10 NIGVVGHVDHGKTTLVQAITG 30 (205)
T ss_dssp EEEEECSTTSSHHHHHHHHHS
T ss_pred EEEEEEccCCcHHHHHHHHHh
Confidence 599999999999999988853
No 270
>d1ewqa2 c.37.1.12 (A:542-765) DNA repair protein MutS, the C-terminal domain {Thermus aquaticus [TaxId: 271]}
Probab=45.41 E-value=5.9 Score=34.46 Aligned_cols=23 Identities=26% Similarity=0.248 Sum_probs=19.7
Q ss_pred eEEEEEccCCChHHHHHHHHhhh
Q 039283 212 SVVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 212 ~vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
+++.|+|+...||||+.+.+.-.
T Consensus 36 ~~~iiTGpN~~GKSt~lk~i~l~ 58 (224)
T d1ewqa2 36 ELVLITGPNMAGKSTFLRQTALI 58 (224)
T ss_dssp CEEEEESCSSSSHHHHHHHHHHH
T ss_pred cEEEEECCCccccchhhhhhHHH
Confidence 37899999999999999887643
No 271
>d1jwyb_ c.37.1.8 (B:) Dynamin G domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=44.56 E-value=11 Score=34.06 Aligned_cols=25 Identities=12% Similarity=0.255 Sum_probs=21.6
Q ss_pred CceEEEEEccCCChHHHHHHHHhhh
Q 039283 210 GFSVVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 210 ~~~vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
.++-|+|+|.-+.|||||...+...
T Consensus 23 ~lP~ivVvG~~ssGKSSliNaLlG~ 47 (306)
T d1jwyb_ 23 DLPQIVVVGSQSSGKSSVLENIVGR 47 (306)
T ss_dssp CCCEEEEEECSSSSHHHHHHHHHTS
T ss_pred CCCeEEEEeCCCCCHHHHHHHHhCC
Confidence 4567899999999999999998753
No 272
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=43.72 E-value=9.2 Score=31.94 Aligned_cols=19 Identities=32% Similarity=0.380 Sum_probs=14.3
Q ss_pred EEEEccCCChHHHHHHHHh
Q 039283 214 VSIKGLGGVGKTTLAQLVN 232 (600)
Q Consensus 214 v~I~G~~GiGKTtLA~~v~ 232 (600)
+.|+++.|.|||..+..+.
T Consensus 26 ~lv~~pTGsGKT~i~~~~~ 44 (200)
T d1wp9a1 26 CLIVLPTGLGKTLIAMMIA 44 (200)
T ss_dssp EEEECCTTSCHHHHHHHHH
T ss_pred eEEEeCCCCcHHHHHHHHH
Confidence 3577999999998665443
No 273
>d1w36b1 c.37.1.19 (B:1-485) Exodeoxyribonuclease V beta chain (RecB), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=43.47 E-value=4.8 Score=39.08 Aligned_cols=22 Identities=32% Similarity=0.205 Sum_probs=16.5
Q ss_pred ceEEEEEccCCChHHHH-HHHHh
Q 039283 211 FSVVSIKGLGGVGKTTL-AQLVN 232 (600)
Q Consensus 211 ~~vv~I~G~~GiGKTtL-A~~v~ 232 (600)
-+++.|.+-+|+|||+. +..+.
T Consensus 16 ~g~~lv~A~AGsGKT~~l~~r~~ 38 (485)
T d1w36b1 16 QGERLIEASAGTGKTFTIAALYL 38 (485)
T ss_dssp SSCEEEECCTTSCHHHHHHHHHH
T ss_pred CCCeEEEEcCchHHHHHHHHHHH
Confidence 35788999999999964 44443
No 274
>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}
Probab=43.18 E-value=16 Score=29.30 Aligned_cols=32 Identities=28% Similarity=0.446 Sum_probs=23.2
Q ss_pred ceEEEEEccCC-ChHHHHHHHHhhhhhhhccCCceEE
Q 039283 211 FSVVSIKGLGG-VGKTTLAQLVNKDDRVQRHFQIKAW 246 (600)
Q Consensus 211 ~~vv~I~G~~G-iGKTtLA~~v~~~~~~~~~F~~~~w 246 (600)
++-|+|.|-.| ||++||- |.+ +..+.|.....
T Consensus 2 pK~I~IlGsTGSIG~~tL~--Vi~--~~~d~f~v~~l 34 (150)
T d1r0ka2 2 PRTVTVLGATGSIGHSTLD--LIE--RNLDRYQVIAL 34 (150)
T ss_dssp CEEEEEETTTSHHHHHHHH--HHH--HTGGGEEEEEE
T ss_pred CcEEEEECCCcHHHHHHHH--HHH--cCCCCcEEEEE
Confidence 47899999999 7999998 665 23345655444
No 275
>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}
Probab=42.77 E-value=6.6 Score=28.52 Aligned_cols=20 Identities=25% Similarity=0.517 Sum_probs=17.0
Q ss_pred EEEEccCCChHHHHHHHHhh
Q 039283 214 VSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 214 v~I~G~~GiGKTtLA~~v~~ 233 (600)
|-++|.||+|-+.||+.+.+
T Consensus 4 ihfiGIgG~GMs~LA~~L~~ 23 (89)
T d1j6ua1 4 IHFVGIGGIGMSAVALHEFS 23 (89)
T ss_dssp EEEETTTSHHHHHHHHHHHH
T ss_pred EEEEeECHHHHHHHHHHHHh
Confidence 66789999999999977654
No 276
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]}
Probab=41.10 E-value=8 Score=39.78 Aligned_cols=26 Identities=27% Similarity=0.236 Sum_probs=22.2
Q ss_pred CceEEEEEccCCChHHHHHHHHhhhh
Q 039283 210 GFSVVSIKGLGGVGKTTLAQLVNKDD 235 (600)
Q Consensus 210 ~~~vv~I~G~~GiGKTtLA~~v~~~~ 235 (600)
.-..|.|.|..|.|||+-++.+.+..
T Consensus 85 ~~QsIiisGeSGsGKTe~~k~il~yL 110 (684)
T d1lkxa_ 85 ENQCVIISGESGAGKTEASKKIMQFL 110 (684)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCeEEEEEcCCCCCHHHHHHHHHHHH
Confidence 34689999999999999999887743
No 277
>d1r5ba3 c.37.1.8 (A:215-459) Eukaryotic peptide chain release factor ERF2, G domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=40.69 E-value=5.9 Score=34.96 Aligned_cols=21 Identities=24% Similarity=0.184 Sum_probs=18.2
Q ss_pred EEEEEccCCChHHHHHHHHhh
Q 039283 213 VVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~~ 233 (600)
-|+|.|--+.|||||+.++..
T Consensus 26 Ni~iiGHVD~GKSTL~~~Ll~ 46 (245)
T d1r5ba3 26 NIVFIGHVDAGKSTLGGNILF 46 (245)
T ss_dssp EEEEEECGGGTHHHHHHHHHH
T ss_pred EEEEEeeCCCCHHHHHHHHHH
Confidence 388999999999999988754
No 278
>d1c9ka_ c.37.1.11 (A:) Adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase CobU {Salmonella typhimurium [TaxId: 90371]}
Probab=40.62 E-value=13 Score=30.92 Aligned_cols=35 Identities=14% Similarity=0.152 Sum_probs=24.5
Q ss_pred EEEEEccCCChHHHHHHHHhhhhhhhccCCceEEEEeCCCC
Q 039283 213 VVSIKGLGGVGKTTLAQLVNKDDRVQRHFQIKAWTCVSEDF 253 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~~~~~~~~~F~~~~wv~vs~~~ 253 (600)
++.|.|..++|||..|..+.. .+..+.+|--+..+
T Consensus 1 iiLVtGGarSGKS~~AE~l~~------~~~~~~YiAT~~~~ 35 (180)
T d1c9ka_ 1 MILVTGGARSGKSRHAEALIG------DAPQVLYIATSQIL 35 (180)
T ss_dssp CEEEEECTTSSHHHHHHHHHC------SCSSEEEEECCCC-
T ss_pred CEEEECCCCccHHHHHHHHHh------cCCCcEEEEccCCC
Confidence 368999999999999987653 34455666555443
No 279
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=39.85 E-value=8.5 Score=39.73 Aligned_cols=26 Identities=27% Similarity=0.185 Sum_probs=22.2
Q ss_pred CceEEEEEccCCChHHHHHHHHhhhh
Q 039283 210 GFSVVSIKGLGGVGKTTLAQLVNKDD 235 (600)
Q Consensus 210 ~~~vv~I~G~~GiGKTtLA~~v~~~~ 235 (600)
.-..|.|.|..|.|||.-++.+.+..
T Consensus 124 ~nQsIiisGeSGaGKTe~~k~il~yL 149 (712)
T d1d0xa2 124 QNQSLLITGESGAGKTENTKKVIQYL 149 (712)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCceEEEeCCCCCCHHHHHHHHHHHH
Confidence 34799999999999999998887643
No 280
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=39.67 E-value=53 Score=28.71 Aligned_cols=38 Identities=24% Similarity=0.247 Sum_probs=26.0
Q ss_pred cchHHHHHHHHhcCCCCCCCCceEEEEEccCCChHHHHHHHHhh
Q 039283 190 EKDKEAIVELLLRDDLRADDGFSVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 190 ~~e~~~l~~~L~~~~~~~~~~~~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
..-+++|.+-+.++ ....-.|.|.-|+|||-+|-....
T Consensus 89 ~~ai~ei~~d~~~~------~~m~rLL~GdvGSGKT~Va~~a~~ 126 (264)
T d1gm5a3 89 KRAHQEIRNDMISE------KPMNRLLQGDVGSGKTVVAQLAIL 126 (264)
T ss_dssp HHHHHHHHHHHHSS------SCCCCEEECCSSSSHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcc------CcceeeeeccccccccHHHHHHHH
Confidence 34455666666433 345678999999999999855543
No 281
>d1f60a3 c.37.1.8 (A:2-240) Elongation factor eEF-1alpha, N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=39.15 E-value=7.7 Score=33.99 Aligned_cols=21 Identities=24% Similarity=0.142 Sum_probs=18.5
Q ss_pred EEEEEccCCChHHHHHHHHhh
Q 039283 213 VVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~~ 233 (600)
-|+|.|-.+.|||||+.++..
T Consensus 8 Ni~iiGHvD~GKsTl~~~ll~ 28 (239)
T d1f60a3 8 NVVVIGHVDSGKSTTTGHLIY 28 (239)
T ss_dssp EEEEEECTTSCHHHHHHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHH
Confidence 688999999999999987764
No 282
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=39.05 E-value=24 Score=30.20 Aligned_cols=18 Identities=28% Similarity=0.374 Sum_probs=14.4
Q ss_pred EEEEEccCCChHHHHHHH
Q 039283 213 VVSIKGLGGVGKTTLAQL 230 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~ 230 (600)
-+.|+++.|.|||..+..
T Consensus 60 ~~~i~apTGsGKT~~~~~ 77 (237)
T d1gkub1 60 SFAATAPTGVGKTSFGLA 77 (237)
T ss_dssp CEECCCCBTSCSHHHHHH
T ss_pred CEEEEecCCChHHHHHHH
Confidence 467889999999976643
No 283
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=38.40 E-value=9.2 Score=39.50 Aligned_cols=26 Identities=23% Similarity=0.121 Sum_probs=22.4
Q ss_pred CceEEEEEccCCChHHHHHHHHhhhh
Q 039283 210 GFSVVSIKGLGGVGKTTLAQLVNKDD 235 (600)
Q Consensus 210 ~~~vv~I~G~~GiGKTtLA~~v~~~~ 235 (600)
....|.|.|..|.|||+-++.+.+..
T Consensus 90 ~~Q~IiisGeSGaGKTe~~k~il~yL 115 (710)
T d1br2a2 90 EDQSILCTGESGAGKTENTKKVIQYL 115 (710)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCcEEEEEeCCCCCHHHHHHHHHHHH
Confidence 34789999999999999999887754
No 284
>d2a5yb1 a.4.5.80 (B:386-543) Cell death protein 4, CED-4 {Caenorhabditis elegans [TaxId: 6239]}
Probab=38.12 E-value=32 Score=25.25 Aligned_cols=81 Identities=12% Similarity=0.261 Sum_probs=53.0
Q ss_pred hhHHHHHHHhccCCCCCcccHHHHHHHHHHcCCcccc-cCCccHHHHHHHHHHHHhhCCCcccccC-CCCeEEEchHHHH
Q 039283 438 PQLKQCFAYISLFPKDYEFEEEQIILLWTAEGFLDQE-YNGRKMEDLGRQFVRELHSRSLFQLSSK-DTSRFVMHDLIND 515 (600)
Q Consensus 438 ~~~k~~f~~ls~fp~~~~i~~~~Li~~Wiaeg~i~~~-~~~~~~e~~~~~~l~~L~~rsLl~~~~~-~~~~~~mH~lv~~ 515 (600)
++.+..+.+.-+.|.+..|+ +.+|-.---+.-. +......+....-+..|-.||-+-.... -.-.|.+..+||-
T Consensus 2 dedrsalafavvmppgvdip----vk~wscvipvdicsnee~qlddevadrlkrlskrgallsgkr~pvlt~kidhiih~ 77 (158)
T d2a5yb1 2 DEDRSALAFAVVMPPGVDIP----VKLWSCVIPVDICSNEEEQLDDEVADRLKRLSKRGALLSGKRMPVLTFKIDHIIHM 77 (158)
T ss_dssp HHHHHHTTGGGSSCTTCCEE----HHHHHHHSCC-------CCCTHHHHHHHHHTTTBSSCSEEECSSSCEEECCHHHHH
T ss_pred cccccceeEEEecCCCCccc----eeEEEEeeeeeecCChHhhhhHHHHHHHHHHHhccchhcCCcCceeEeehHHHHHH
Confidence 45677788888899999998 5678664333211 2223344445556889999987754332 3468999999999
Q ss_pred HHHHHhc
Q 039283 516 LARWAAG 522 (600)
Q Consensus 516 ~a~~~~~ 522 (600)
|.+.+..
T Consensus 78 flkhvvd 84 (158)
T d2a5yb1 78 FLKHVVD 84 (158)
T ss_dssp HHHTTSC
T ss_pred HHHHHhh
Confidence 9877654
No 285
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=35.66 E-value=10 Score=39.64 Aligned_cols=26 Identities=27% Similarity=0.198 Sum_probs=22.0
Q ss_pred CceEEEEEccCCChHHHHHHHHhhhh
Q 039283 210 GFSVVSIKGLGGVGKTTLAQLVNKDD 235 (600)
Q Consensus 210 ~~~vv~I~G~~GiGKTtLA~~v~~~~ 235 (600)
.-..|.|.|..|.|||.-++.+.+..
T Consensus 122 ~~QsIiisGeSGaGKTe~~K~il~yL 147 (794)
T d2mysa2 122 ENQSILITGESGAGKTVNTKRVIQYF 147 (794)
T ss_dssp CCEEEEEEECTTSCHHHHHHHHHHHH
T ss_pred CCcEEEEEcCCCCCHHHHHHHHHHHH
Confidence 34689999999999999998887654
No 286
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}
Probab=34.15 E-value=11 Score=39.35 Aligned_cols=26 Identities=27% Similarity=0.128 Sum_probs=22.2
Q ss_pred CceEEEEEccCCChHHHHHHHHhhhh
Q 039283 210 GFSVVSIKGLGGVGKTTLAQLVNKDD 235 (600)
Q Consensus 210 ~~~vv~I~G~~GiGKTtLA~~v~~~~ 235 (600)
.-..|.|.|.+|.|||.-++.+.+..
T Consensus 120 ~nQ~IiisGESGaGKTe~~K~il~yL 145 (789)
T d1kk8a2 120 ENQSCLITGESGAGKTENTKKVIMYL 145 (789)
T ss_dssp SEEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCcEEEEEeCCCCCHHHHHHHHHHHH
Confidence 45799999999999999998887653
No 287
>d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]}
Probab=33.00 E-value=78 Score=26.10 Aligned_cols=88 Identities=23% Similarity=0.254 Sum_probs=47.4
Q ss_pred ccccc---chHHHHHHHHhcCCCCCCCCceEEEEEccCCChHHHHHHHHhhhhhhhccCCceEEEEeCCCCCHHHHHHHH
Q 039283 186 VYGRE---KDKEAIVELLLRDDLRADDGFSVVSIKGLGGVGKTTLAQLVNKDDRVQRHFQIKAWTCVSEDFDVFTVSKSI 262 (600)
Q Consensus 186 ~vGR~---~e~~~l~~~L~~~~~~~~~~~~vv~I~G~~GiGKTtLA~~v~~~~~~~~~F~~~~wv~vs~~~~~~~~l~~i 262 (600)
-+||. +..++|.+.|...+ -++.+.||||-.=|..+-.+.+-.+ .+.....--+.-+|..+
T Consensus 65 ~~g~~aa~e~~~~I~~~l~~~d-------~vfi~AGlGGgTGtgaapviA~~ak---e~g~lvv~ivtlPF~~E------ 128 (194)
T d1w5fa1 65 EIGEQAALESEEKIREVLQDTH-------MVFITAGFGGGTGTGASPVIAKIAK---EMGILTVAIVTTPFYFE------ 128 (194)
T ss_dssp HHHHHHHHHTHHHHHHHTTTCS-------EEEEEEETTSSHHHHHHHHHHHHHH---HTTCEEEEEEEECCGGG------
T ss_pred hhhHhHHHHHHHHHHHHhcCCC-------eEEEEEecCCCcccchHHHHHHHHH---HcCCceEEEEeechhhh------
Confidence 35664 45667777774332 5777789999877877766665322 23332222233343322
Q ss_pred HHHhhcCCCCCcccHHHHHHHHHHHhCCCcEEEEEec
Q 039283 263 LNSIASDQCTDKDDLNLLQEKLKKQLSGKKFLLVLDD 299 (600)
Q Consensus 263 l~~l~~~~~~~~~~~~~l~~~l~~~L~~k~~LlVlDd 299 (600)
.........+-|.+..+.-..+||+||
T Consensus 129 ----------G~~r~~~A~~gl~~L~~~~D~~Ivi~N 155 (194)
T d1w5fa1 129 ----------GPERLKKAIEGLKKLRKHVDTLIKISN 155 (194)
T ss_dssp ----------CHHHHHHHHHHHHHHHHTCSEEEEEEH
T ss_pred ----------HHHHHHHHHHHHHHHHHHhhhhheehH
Confidence 111223333444444445667888987
No 288
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}
Probab=32.58 E-value=13 Score=38.47 Aligned_cols=25 Identities=24% Similarity=0.300 Sum_probs=21.4
Q ss_pred CceEEEEEccCCChHHHHHHHHhhh
Q 039283 210 GFSVVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 210 ~~~vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
....|.|.|..|.|||.-++.+.+.
T Consensus 93 ~~Q~IiisGeSGsGKTe~~k~il~~ 117 (730)
T d1w7ja2 93 RNQSIIVSGESGAGKTVSAKYAMRY 117 (730)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHH
Confidence 3468999999999999999888764
No 289
>d1p6qa_ c.23.1.1 (A:) CheY protein {Sinorhizobium meliloti, CheY2 [TaxId: 382]}
Probab=27.68 E-value=1.1e+02 Score=22.73 Aligned_cols=105 Identities=10% Similarity=0.055 Sum_probs=51.9
Q ss_pred CCCCCHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHhCCCcEEEEEecCCCCChhhHHhh--cCCCCCCCCCcEEEE-
Q 039283 250 SEDFDVFTVSKSILNSIASDQCTDKDDLNLLQEKLKKQLSGKKFLLVLDDVWNENYNSWRAL--SCPFGAGASGSKIVV- 326 (600)
Q Consensus 250 s~~~~~~~~l~~il~~l~~~~~~~~~~~~~l~~~l~~~L~~k~~LlVlDdv~~~~~~~~~~l--~~~l~~~~~gs~Ilv- 326 (600)
.+.......+..+++..+........+.++..+.+.+ .+.-++|+|=- -++...++.+ ....+. .++..||+
T Consensus 13 DD~~~~~~~l~~~L~~~g~~~v~~a~~~~~al~~l~~---~~~dlii~D~~-mP~~~G~el~~~lr~~~~-~~~~pii~l 87 (129)
T d1p6qa_ 13 DDQVTSRLLLGDALQQLGFKQITAAGDGEQGMKIMAQ---NPHHLVISDFN-MPKMDGLGLLQAVRANPA-TKKAAFIIL 87 (129)
T ss_dssp CSSHHHHHHHHHHHHTTTCSCEECCSSHHHHHHHHHT---SCCSEEEECSS-SCSSCHHHHHHHHTTCTT-STTCEEEEC
T ss_pred ECCHHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHh---CCCCeEEeeee-cCCCChHHHHHHHHhCcc-cCCCeEEEE
Confidence 3444567777788887765422134455555555543 34557888732 1222333332 222221 23444444
Q ss_pred eccChH-HH-hhc-CccceeecCCCCHHHHHHHHHH
Q 039283 327 THRNQG-VA-ETM-RAVSTKTLKELSDDDCLRVLIQ 359 (600)
Q Consensus 327 TtR~~~-v~-~~~-~~~~~~~l~~L~~~ea~~Lf~~ 359 (600)
|+.... .. ... .+...|-.+|++.++-...+.+
T Consensus 88 t~~~~~~~~~~a~~~G~~~~l~KP~~~~~L~~~i~~ 123 (129)
T d1p6qa_ 88 TAQGDRALVQKAAALGANNVLAKPFTIEKMKAAIEA 123 (129)
T ss_dssp CSCCCHHHHHHHHHHTCSCEECCCSSHHHHHHHHHH
T ss_pred EecCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHH
Confidence 554431 11 111 1335677888887776665543
No 290
>d1t5la1 c.37.1.19 (A:2-414) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=26.83 E-value=35 Score=32.24 Aligned_cols=61 Identities=15% Similarity=0.049 Sum_probs=38.4
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEccCCChHHHHHHHHhhhhhhhccCCceEEEEeCCCCCHHHHHHHHHHHh
Q 039283 193 KEAIVELLLRDDLRADDGFSVVSIKGLGGVGKTTLAQLVNKDDRVQRHFQIKAWTCVSEDFDVFTVSKSILNSI 266 (600)
Q Consensus 193 ~~~l~~~L~~~~~~~~~~~~vv~I~G~~GiGKTtLA~~v~~~~~~~~~F~~~~wv~vs~~~~~~~~l~~il~~l 266 (600)
+++|.+-|..+ .+-..|.|..|+|||-++..++... +.-+.|-........++..++-.-+
T Consensus 20 I~~l~~~l~~g-------~~~q~l~GltGS~ka~~iA~l~~~~------~rp~LVVt~n~~~A~qL~~dL~~~l 80 (413)
T d1t5la1 20 IAKLVDGLRRG-------VKHQTLLGATGTGKTFTISNVIAQV------NKPTLVIAHNKTLAGQLYSELKEFF 80 (413)
T ss_dssp HHHHHHHHHHT-------CSEEEEEECTTSCHHHHHHHHHHHH------TCCEEEECSSHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhcC-------CCcEEEeCCCCcHHHHHHHHHHHHh------CCCEEEEeCCHHHHHHHHHHHHHHc
Confidence 67788877543 3567799999999998887777631 2233444444444555555555444
No 291
>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}
Probab=26.50 E-value=28 Score=26.11 Aligned_cols=105 Identities=15% Similarity=0.119 Sum_probs=52.7
Q ss_pred CCCCCHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHhCCCcEEEEEecCCCCChhhHHhhcCCCCCCCCCcEE-EEec
Q 039283 250 SEDFDVFTVSKSILNSIASDQCTDKDDLNLLQEKLKKQLSGKKFLLVLDDVWNENYNSWRALSCPFGAGASGSKI-VVTH 328 (600)
Q Consensus 250 s~~~~~~~~l~~il~~l~~~~~~~~~~~~~l~~~l~~~L~~k~~LlVlDdv~~~~~~~~~~l~~~l~~~~~gs~I-lvTt 328 (600)
.+.....+.+..+++..+........+..+..+.+++. ++=++++| +.-++...++.+... ....+...| ++|+
T Consensus 8 DD~~~~~~~l~~~L~~~g~~v~~~a~~~~~al~~~~~~---~~dliilD-~~mp~~~G~e~~~~i-r~~~~~~pvi~ls~ 82 (118)
T d1u0sy_ 8 DDAAFMRMMLKDIITKAGYEVAGEATNGREAVEKYKEL---KPDIVTMD-ITMPEMNGIDAIKEI-MKIDPNAKIIVCSA 82 (118)
T ss_dssp CSCHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CCSEEEEE-CSCGGGCHHHHHHHH-HHHCTTCCEEEEEC
T ss_pred eCCHHHHHHHHHHHHHcCCceEEEECCHHHHHHHHHhc---cCCEEEEe-cCCCCCCHHHHHHHH-HHhCCCCcEEEEEc
Confidence 34445667777777776543221234555556666543 55688888 322333333332211 111223444 4555
Q ss_pred cChH-H-Hhhc-CccceeecCCCCHHHHHHHHHH
Q 039283 329 RNQG-V-AETM-RAVSTKTLKELSDDDCLRVLIQ 359 (600)
Q Consensus 329 R~~~-v-~~~~-~~~~~~~l~~L~~~ea~~Lf~~ 359 (600)
.+.. . ...+ .+..-|-.+|++.++-.+-+.+
T Consensus 83 ~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~l~~ 116 (118)
T d1u0sy_ 83 MGQQAMVIEAIKAGAKDFIVKPFQPSRVVEALNK 116 (118)
T ss_dssp TTCHHHHHHHHHTTCCEEEESSCCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHH
Confidence 5431 1 1111 2345677889988877665543
No 292
>d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=24.31 E-value=1.8e+02 Score=23.96 Aligned_cols=89 Identities=22% Similarity=0.212 Sum_probs=47.9
Q ss_pred ccccc---chHHHHHHHHhcCCCCCCCCceEEEEEccCCChHHHHHHHHhhhhhhhccCCceEEEEeCCCCCHHHHHHHH
Q 039283 186 VYGRE---KDKEAIVELLLRDDLRADDGFSVVSIKGLGGVGKTTLAQLVNKDDRVQRHFQIKAWTCVSEDFDVFTVSKSI 262 (600)
Q Consensus 186 ~vGR~---~e~~~l~~~L~~~~~~~~~~~~vv~I~G~~GiGKTtLA~~v~~~~~~~~~F~~~~wv~vs~~~~~~~~l~~i 262 (600)
-+||. +..++|.+.|...+ -++.+.|+||--=|..+-.+.+-.+ .+.....--+.-+|..+
T Consensus 80 ~~g~~aa~e~~~~I~~~l~~~d-------~vfi~AGlGGGTGsgaapvia~~ak---e~g~lvv~ivtlPF~~E------ 143 (209)
T d2vapa1 80 KIGEEAAKESAEEIKAAIQDSD-------MVFITCGLGGGTGTGSAPVVAEISK---KIGALTVAVVTLPFVME------ 143 (209)
T ss_dssp HHHHHHHHHTHHHHHHHHTTCS-------EEEEEEETTSSHHHHHHHHHHHHHH---HTTCEEEEEEEECCGGG------
T ss_pred HHHHHHHHHHHHHHHHhccCCC-------EEEEEEeCCCCccccHHHHHHHHHH---HcCCcEEEEEecchhhh------
Confidence 35664 45567888774332 5777889998766776666654222 23222222223333221
Q ss_pred HHHhhcCCCCCcccHHHHHHHHHHHhCCCcEEEEEecC
Q 039283 263 LNSIASDQCTDKDDLNLLQEKLKKQLSGKKFLLVLDDV 300 (600)
Q Consensus 263 l~~l~~~~~~~~~~~~~l~~~l~~~L~~k~~LlVlDdv 300 (600)
.........+-|.+..+.-..+||+||=
T Consensus 144 ----------G~~r~~~A~~~l~~l~~~~d~~Ivi~Nd 171 (209)
T d2vapa1 144 ----------GKVRMKNAMEGLERLKQHTDTLVVIPNE 171 (209)
T ss_dssp ----------CHHHHHHHHHHHHHHHTTCSEEEEEEGG
T ss_pred ----------hHHHHHHHHHHHHHHHHhhcceEecccH
Confidence 1122233344455555566789999974
No 293
>d1c4oa1 c.37.1.19 (A:2-409) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}
Probab=24.17 E-value=47 Score=31.17 Aligned_cols=62 Identities=18% Similarity=0.112 Sum_probs=39.0
Q ss_pred hHHHHHHHHhcCCCCCCCCceEEEEEccCCChHHHHHHHHhhhhhhhccCCceEEEEeCCCCCHHHHHHHHHHHh
Q 039283 192 DKEAIVELLLRDDLRADDGFSVVSIKGLGGVGKTTLAQLVNKDDRVQRHFQIKAWTCVSEDFDVFTVSKSILNSI 266 (600)
Q Consensus 192 e~~~l~~~L~~~~~~~~~~~~vv~I~G~~GiGKTtLA~~v~~~~~~~~~F~~~~wv~vs~~~~~~~~l~~il~~l 266 (600)
.+++|.+.|..+ .+.+.|.|..|.|||-++..++... +.-+.|-+........+..++..-+
T Consensus 16 aI~~l~~~L~~g-------~~~~~L~GlsgS~ka~~~A~l~~~~------~rp~LvVt~~~~~A~~l~~dL~~~l 77 (408)
T d1c4oa1 16 AIAGLVEALRDG-------ERFVTLLGATGTGKTVTMAKVIEAL------GRPALVLAPNKILAAQLAAEFRELF 77 (408)
T ss_dssp HHHHHHHHHHTT-------CSEEEEEECTTSCHHHHHHHHHHHH------TCCEEEEESSHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhcC-------CCcEEEecCCCCHHHHHHHHHHHHh------CCCEEEEeCCHHHHHHHHHHHHHhc
Confidence 388888888543 2568999999999998887777521 1123333444444455555554444
No 294
>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}
Probab=23.77 E-value=15 Score=26.40 Aligned_cols=20 Identities=30% Similarity=0.336 Sum_probs=15.0
Q ss_pred EEEEEccCCChHHHHHHHHhh
Q 039283 213 VVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 213 vv~I~G~~GiGKTtLA~~v~~ 233 (600)
-|.|.|+|++|.++ |+.+.+
T Consensus 7 ~v~ViGlG~sG~s~-a~~L~~ 26 (93)
T d2jfga1 7 NVVIIGLGLTGLSC-VDFFLA 26 (93)
T ss_dssp CEEEECCSHHHHHH-HHHHHH
T ss_pred EEEEEeECHHHHHH-HHHHHH
Confidence 47899999999975 655543
No 295
>d2a9pa1 c.23.1.1 (A:2-118) DNA-binding response regulator MicA, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}
Probab=23.22 E-value=78 Score=23.28 Aligned_cols=102 Identities=7% Similarity=0.075 Sum_probs=52.9
Q ss_pred CCCCCHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHhCCCcEEEEEecCCCCChhhHHhhcCCCCCCCCCcEEEEecc
Q 039283 250 SEDFDVFTVSKSILNSIASDQCTDKDDLNLLQEKLKKQLSGKKFLLVLDDVWNENYNSWRALSCPFGAGASGSKIVVTHR 329 (600)
Q Consensus 250 s~~~~~~~~l~~il~~l~~~~~~~~~~~~~l~~~l~~~L~~k~~LlVlDdv~~~~~~~~~~l~~~l~~~~~gs~IlvTtR 329 (600)
.+.......+..+++..+-... ...+.++..+.+.+ .++=|+++| +.-++...++.+.. +.....--.|++|+.
T Consensus 7 dDd~~~~~~l~~~L~~~g~~v~-~a~~~~eal~~~~~---~~~dlillD-~~mp~~~G~~~~~~-i~~~~~~pvI~lt~~ 80 (117)
T d2a9pa1 7 DDEKPISDIIKFNMTKEGYEVV-TAFNGREALEQFEA---EQPDIIILD-LMLPEIDGLEVAKT-IRKTSSVPILMLSAK 80 (117)
T ss_dssp CSCHHHHHHHHHHHHHTTCEEE-EESSHHHHHHHHHH---HCCSEEEEC-SSCSSSCHHHHHHH-HHTTCCCCEEEEESC
T ss_pred ECCHHHHHHHHHHHHHCCCEEE-EECCHHHHHHHHHh---cCCCEEEec-cccCCCCccHHHHH-HHhCCCCCEEEEecC
Confidence 3444566777777777654433 45556666666655 355577877 33233333433321 112222224666776
Q ss_pred ChHHHh--hc-CccceeecCCCCHHHHHHHH
Q 039283 330 NQGVAE--TM-RAVSTKTLKELSDDDCLRVL 357 (600)
Q Consensus 330 ~~~v~~--~~-~~~~~~~l~~L~~~ea~~Lf 357 (600)
...... .. .+..-|-.+|++.++-..-.
T Consensus 81 ~~~~~~~~a~~~Ga~d~l~KP~~~~~L~~~i 111 (117)
T d2a9pa1 81 DSEFDKVIGLELGADDYVTKPFSNRELQARV 111 (117)
T ss_dssp CSHHHHHHHHHHTCSEEEESSCCHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCEEEECCCCHHHHHHHH
Confidence 542211 11 13356777888877665544
No 296
>d1e8ca3 c.72.2.1 (A:104-337) UDP-N-acetylmuramyl tripeptide synthetase MurE {Escherichia coli [TaxId: 562]}
Probab=21.83 E-value=22 Score=30.13 Aligned_cols=24 Identities=38% Similarity=0.556 Sum_probs=18.9
Q ss_pred CCceEEEEEccCCChHHHHHHHHhhh
Q 039283 209 DGFSVVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 209 ~~~~vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
.+.++|+|+|-- ||||....+++-
T Consensus 3 ~~~~vI~ITGT~--GKTTt~~~l~~i 26 (234)
T d1e8ca3 3 DNLRLVGVTGTN--GKTTTTQLLAQW 26 (234)
T ss_dssp GSSEEEEEESSS--CHHHHHHHHHHH
T ss_pred cCCeEEEEECCC--cHHHHHHHHHHH
Confidence 467889898764 999999887763
No 297
>d1oywa2 c.37.1.19 (A:1-206) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=21.51 E-value=27 Score=29.00 Aligned_cols=16 Identities=25% Similarity=0.100 Sum_probs=13.3
Q ss_pred EEEEccCCChHHHHHH
Q 039283 214 VSIKGLGGVGKTTLAQ 229 (600)
Q Consensus 214 v~I~G~~GiGKTtLA~ 229 (600)
+.|..+.|.|||..+.
T Consensus 43 vlv~apTGsGKT~~~~ 58 (206)
T d1oywa2 43 CLVVMPTGGGKSLCYQ 58 (206)
T ss_dssp EEEECSCHHHHHHHHH
T ss_pred EEEEcCCCCCCcchhh
Confidence 6788999999997663
No 298
>d2gc6a2 c.72.2.2 (A:1-296) Folylpolyglutamate synthetase {Lactobacillus casei [TaxId: 1582]}
Probab=20.62 E-value=30 Score=30.92 Aligned_cols=35 Identities=14% Similarity=0.184 Sum_probs=24.2
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEccCCChHHHHHHHHhh
Q 039283 193 KEAIVELLLRDDLRADDGFSVVSIKGLGGVGKTTLAQLVNK 233 (600)
Q Consensus 193 ~~~l~~~L~~~~~~~~~~~~vv~I~G~~GiGKTtLA~~v~~ 233 (600)
+.++.+.|..+ +.+.++|+|+|-. ||||.+..+..
T Consensus 25 ~~~~l~~lg~P----~~~lkvI~VTGTN--GKtST~~~i~~ 59 (296)
T d2gc6a2 25 ILTLLHALGNP----QQQGRYIHVTGTN--GKGSAANAIAH 59 (296)
T ss_dssp HHHHHHHTTCG----GGSSCEEEEECSS--SHHHHHHHHHH
T ss_pred HHHHHHHcCCc----hhhCCEEEEeccC--cHHHHHHHHHH
Confidence 55566666433 3568899888654 79999977765
No 299
>d1o5za2 c.72.2.2 (A:-2-293) Folylpolyglutamate synthetase {Thermotoga maritima [TaxId: 2336]}
Probab=20.47 E-value=37 Score=30.18 Aligned_cols=36 Identities=19% Similarity=0.287 Sum_probs=25.4
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEccCCChHHHHHHHHhhh
Q 039283 193 KEAIVELLLRDDLRADDGFSVVSIKGLGGVGKTTLAQLVNKD 234 (600)
Q Consensus 193 ~~~l~~~L~~~~~~~~~~~~vv~I~G~~GiGKTtLA~~v~~~ 234 (600)
+.++.+.|..+ +.+.++|+|+|-. ||||.+..++.-
T Consensus 29 ~~~~l~~lg~P----~~~lkvI~VTGTN--GKTSt~~~i~~I 64 (296)
T d1o5za2 29 ISMLLSKLGNP----HLEYKTIHIGGTN--GKGSVANMVSNI 64 (296)
T ss_dssp HHHHHHHTTCG----GGSSEEEEEECSS--SHHHHHHHHHHH
T ss_pred HHHHHHHcCCc----hhhCCEEEEEecC--cHHHHHHHHHHH
Confidence 66666666433 3567888888754 799999777653
Done!