BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>039286
MASLDNPASELKNVTPRPSRVIYFRIDIALRILLFVFSFVAILLIVTSKQTNLFPVPGTT
FSVKIPAKFTYFPAFIFITALTSLSAIRKLAYRKRLLLLIAFLDTFHHVEIVPMMQLMLG
VVASAIGAALAVAYIGLKGNSHAGWNKVANAGYDKFIKHTATAIALSIFAVTDLVTLTMH
STYTLYKGVHD

High Scoring Gene Products

Symbol, full name Information P value
AT3G06390 protein from Arabidopsis thaliana 2.0e-17
AT4G15610 protein from Arabidopsis thaliana 2.1e-13

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  039286
        (191 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2081091 - symbol:AT3G06390 "AT3G06390" species...   213  2.0e-17   1
TAIR|locus:2130479 - symbol:AT4G15610 "AT4G15610" species...   175  2.1e-13   1


>TAIR|locus:2081091 [details] [associations]
            symbol:AT3G06390 "AT3G06390" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] GO:GO:0016021 GO:GO:0005886 EMBL:CP002686
            GenomeReviews:BA000014_GR EMBL:AC011623 HOGENOM:HOG000237690
            InterPro:IPR006702 InterPro:IPR006459 Pfam:PF04535
            TIGRFAMs:TIGR01569 EMBL:BT003953 EMBL:BT005725 IPI:IPI00528355
            RefSeq:NP_187290.1 UniGene:At.27805 STRING:Q9SQU2 PaxDb:Q9SQU2
            PRIDE:Q9SQU2 EnsemblPlants:AT3G06390.1 GeneID:819813
            KEGG:ath:AT3G06390 TAIR:At3g06390 eggNOG:NOG329326
            InParanoid:Q9SQU2 OMA:NDSPAFI PhylomeDB:Q9SQU2
            ProtClustDB:CLSN2696701 Genevestigator:Q9SQU2 Uniprot:Q9SQU2
        Length = 199

 Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
 Identities = 61/195 (31%), Positives = 89/195 (45%)

Query:     1 MASLDNPASEL-------KNVTPRPSRVIYF----RIDIALRILLFVFSFVAILLIVTSK 49
             MAS +NP  E         + TP PS    F    +IDI  R+LLF  +  A++++VTS 
Sbjct:     1 MASTENPDPETGKSEPIPASATPPPSSAASFLDCRKIDIITRVLLFSATLTALIVMVTSD 60

Query:    50 QTNLFPVPGTTFSVKIPAKFTYFPAFI-FITALTSLSXXXXXXXXXXXXXXXX--FLDTF 106
             QT +  +PG +    + A+F   PAFI F+ AL   S                  F   F
Sbjct:    61 QTEMTQLPGVSSPAPVSAEFNDSPAFIYFVVALVVASFYALISTLVSISLLLKPEFTAQF 120

Query:   107 HHVEIVPMMQLMXXXXXXXXXXXXXXXXXXXKGNSHAGWNKVANAGYDKFIKHTATAIAL 166
               + +  +  +M                   KGN   GWNK+ N  YDKF ++ AT++AL
Sbjct:   121 S-IYLASLDMVMLGILASATGTAGGVAYIALKGNEEVGWNKICNV-YDKFCRYIATSLAL 178

Query:   167 SIFAVTDLVTLTMHS 181
             S+FA   L+ L++ S
Sbjct:   179 SLFASLLLLVLSIWS 193


>TAIR|locus:2130479 [details] [associations]
            symbol:AT4G15610 "AT4G15610" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0005794 "Golgi apparatus"
            evidence=IDA] [GO:0006865 "amino acid transport" evidence=RCA]
            [GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0010167
            "response to nitrate" evidence=RCA] [GO:0010583 "response to
            cyclopentenone" evidence=RCA] [GO:0015706 "nitrate transport"
            evidence=RCA] [GO:0005768 "endosome" evidence=IDA] [GO:0005802
            "trans-Golgi network" evidence=IDA] GO:GO:0016021 GO:GO:0005886
            GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0005768
            GO:GO:0005802 EMBL:Z97339 HOGENOM:HOG000237690 InterPro:IPR006702
            InterPro:IPR006459 Pfam:PF04535 TIGRFAMs:TIGR01569
            ProtClustDB:CLSN2696701 EMBL:AL161542 EMBL:AF324722 EMBL:AF326884
            EMBL:AY113938 EMBL:AK226478 EMBL:AY086594 IPI:IPI00526117
            PIR:A71421 RefSeq:NP_567472.1 UniGene:At.24397 PaxDb:Q9FE29
            PRIDE:Q9FE29 EnsemblPlants:AT4G15610.1 GeneID:827238
            KEGG:ath:AT4G15610 TAIR:At4g15610 eggNOG:NOG246037
            InParanoid:Q9FE29 OMA:TLDTERS PhylomeDB:Q9FE29
            Genevestigator:Q9FE29 Uniprot:Q9FE29
        Length = 193

 Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
 Identities = 51/166 (30%), Positives = 79/166 (47%)

Query:    28 IALRILLFVFSFVAILLIVTSKQT-NLFPVPGTTFSVKIPA-KFTYFPAFI-FITALT-S 83
             + LR +LF  +  +I+++VTSKQT N+F +PGT   ++IPA +FT  PA I F+ AL+ +
Sbjct:    31 VVLRFVLFAATLTSIVVMVTSKQTKNIF-LPGTP--IRIPAAEFTNSPALIYFVVALSVA 87

Query:    84 LSXXXXXXXXXXXXXXXXFLDTFHHVEIVPMMQLMXXXXXXXXXXXXXXXXXXXKGNSHA 143
                                      + +  M  +M                   KGN   
Sbjct:    88 CFYSIVSTFVTVSAFKKHSCSAVLLLNLAIMDAVMVGIVASATGAGGGVAYLGLKGNKEV 147

Query:   144 GWNKVANAGYDKFIKHTATAIALSIFAVTDLVTLTMHSTYTLYKGV 189
              W K+ +  YDKF +H   AIA+S+FA   L+ L++ S  +LYK +
Sbjct:   148 RWGKICHI-YDKFCRHVGGAIAVSLFASVVLLLLSIISVLSLYKKI 192


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.328   0.138   0.407    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      191       156   0.00073  106 3  11 22  0.39    31
                                                     30  0.42    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  537 (57 KB)
  Total size of DFA:  123 KB (2081 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.05u 0.08s 11.13t   Elapsed:  00:00:01
  Total cpu time:  11.05u 0.08s 11.13t   Elapsed:  00:00:02
  Start:  Tue May 21 02:31:17 2013   End:  Tue May 21 02:31:19 2013

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