Query 039288
Match_columns 138
No_of_seqs 131 out of 1130
Neff 9.0
Searched_HMMs 46136
Date Fri Mar 29 08:13:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039288.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/039288hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2130 Putative NADP-dependen 99.9 2.5E-24 5.4E-29 157.7 10.8 127 1-132 133-310 (340)
2 KOG1196 Predicted NAD-dependen 99.9 2.4E-21 5.2E-26 141.8 9.2 129 1-133 136-313 (343)
3 KOG1197 Predicted quinone oxid 99.8 3.3E-18 7.2E-23 123.2 7.6 127 2-133 130-303 (336)
4 COG0604 Qor NADPH:quinone redu 99.7 1.7E-17 3.8E-22 125.4 10.9 124 1-133 125-298 (326)
5 PLN03154 putative allyl alcoho 99.6 5E-14 1.1E-18 107.3 11.1 127 1-132 141-317 (348)
6 cd08294 leukotriene_B4_DH_like 99.5 1.7E-13 3.7E-18 102.7 10.6 124 2-130 127-299 (329)
7 cd08295 double_bond_reductase_ 99.4 1.6E-12 3.5E-17 98.2 11.4 125 2-131 135-309 (338)
8 TIGR02825 B4_12hDH leukotriene 99.4 3.3E-12 7.2E-17 96.0 10.8 126 2-131 122-297 (325)
9 KOG1198 Zinc-binding oxidoredu 99.4 3.4E-12 7.3E-17 97.3 9.6 128 2-135 135-320 (347)
10 cd08293 PTGR2 Prostaglandin re 99.3 2.5E-11 5.3E-16 91.8 12.1 125 2-131 136-316 (345)
11 KOG1202 Animal-type fatty acid 99.3 7E-12 1.5E-16 105.4 6.4 114 2-125 1536-1702(2376)
12 KOG0025 Zn2+-binding dehydroge 99.2 3.3E-11 7.1E-16 88.7 6.9 136 2-138 144-331 (354)
13 cd08281 liver_ADH_like1 Zinc-d 99.1 1.6E-09 3.4E-14 83.1 10.4 116 2-129 175-340 (371)
14 cd05288 PGDH Prostaglandin deh 99.0 4E-09 8.7E-14 79.0 10.8 124 2-130 129-301 (329)
15 COG1064 AdhP Zn-dependent alco 99.0 1.4E-09 2.9E-14 82.4 7.3 118 2-132 151-309 (339)
16 cd08292 ETR_like_2 2-enoyl thi 99.0 5.7E-09 1.2E-13 78.0 9.8 124 2-131 124-296 (324)
17 TIGR03451 mycoS_dep_FDH mycoth 99.0 7.5E-09 1.6E-13 79.0 10.5 120 2-129 160-326 (358)
18 cd08233 butanediol_DH_like (2R 98.9 1.3E-08 2.9E-13 77.2 10.3 110 2-129 157-317 (351)
19 cd05282 ETR_like 2-enoyl thioe 98.9 3.2E-08 6.8E-13 73.8 10.2 124 2-130 122-294 (323)
20 PLN02827 Alcohol dehydrogenase 98.8 4.5E-08 9.7E-13 75.5 10.8 119 3-129 178-344 (378)
21 cd08291 ETR_like_1 2-enoyl thi 98.8 4.4E-08 9.6E-13 73.6 10.3 120 2-133 128-298 (324)
22 cd08239 THR_DH_like L-threonin 98.8 5.1E-08 1.1E-12 73.7 10.6 114 2-129 148-307 (339)
23 cd08250 Mgc45594_like Mgc45594 98.8 9.3E-08 2E-12 71.7 10.6 123 2-130 123-298 (329)
24 TIGR03201 dearomat_had 6-hydro 98.7 1.3E-07 2.8E-12 72.0 10.2 117 2-129 151-317 (349)
25 cd08297 CAD3 Cinnamyl alcohol 98.7 2E-07 4.4E-12 70.3 10.8 118 2-130 150-312 (341)
26 PLN02740 Alcohol dehydrogenase 98.7 1.2E-07 2.7E-12 73.0 9.6 120 2-129 182-349 (381)
27 PTZ00354 alcohol dehydrogenase 98.7 2E-07 4.3E-12 69.8 10.3 120 2-130 124-298 (334)
28 PRK09880 L-idonate 5-dehydroge 98.7 1.3E-07 2.9E-12 71.8 9.3 113 2-129 154-310 (343)
29 cd08278 benzyl_alcohol_DH Benz 98.7 2E-07 4.4E-12 71.4 9.9 120 2-129 170-335 (365)
30 cd08300 alcohol_DH_class_III c 98.7 3E-07 6.6E-12 70.5 10.8 120 2-129 170-337 (368)
31 cd08246 crotonyl_coA_red croto 98.7 3.3E-07 7.1E-12 70.8 10.6 115 2-130 175-362 (393)
32 cd08277 liver_alcohol_DH_like 98.7 2.5E-07 5.5E-12 70.8 9.8 120 2-129 168-334 (365)
33 cd05286 QOR2 Quinone oxidoredu 98.7 5.2E-07 1.1E-11 66.5 11.1 124 2-130 120-290 (320)
34 PLN02586 probable cinnamyl alc 98.6 3E-07 6.4E-12 70.5 9.5 115 2-131 167-325 (360)
35 cd08244 MDR_enoyl_red Possible 98.6 8.3E-07 1.8E-11 66.2 11.3 123 2-130 127-294 (324)
36 cd08301 alcohol_DH_plants Plan 98.6 4E-07 8.6E-12 69.8 9.6 119 2-129 171-338 (369)
37 cd08243 quinone_oxidoreductase 98.6 6.4E-07 1.4E-11 66.5 10.3 116 2-130 126-291 (320)
38 TIGR02817 adh_fam_1 zinc-bindi 98.6 7.3E-07 1.6E-11 67.0 10.2 121 2-131 127-303 (336)
39 KOG0023 Alcohol dehydrogenase, 98.6 2.8E-07 6E-12 69.1 7.5 113 2-132 166-327 (360)
40 cd08290 ETR 2-enoyl thioester 98.6 8.7E-07 1.9E-11 66.8 10.3 125 2-130 130-308 (341)
41 cd08296 CAD_like Cinnamyl alco 98.6 9.7E-07 2.1E-11 66.6 10.5 115 2-130 148-305 (333)
42 TIGR02818 adh_III_F_hyde S-(hy 98.6 9.7E-07 2.1E-11 67.8 10.4 58 2-65 169-257 (368)
43 cd08240 6_hydroxyhexanoate_dh_ 98.5 1E-06 2.2E-11 66.8 10.1 118 2-130 159-320 (350)
44 PRK10754 quinone oxidoreductas 98.5 1.1E-06 2.5E-11 65.8 9.7 59 2-65 124-211 (327)
45 cd08253 zeta_crystallin Zeta-c 98.5 1.5E-06 3.3E-11 64.3 10.0 124 2-130 128-295 (325)
46 cd08274 MDR9 Medium chain dehy 98.5 1.6E-06 3.5E-11 65.5 10.1 116 2-130 162-320 (350)
47 cd08263 Zn_ADH10 Alcohol dehyd 98.5 1.8E-06 4E-11 66.0 10.4 119 2-130 171-336 (367)
48 cd08269 Zn_ADH9 Alcohol dehydr 98.5 2.1E-06 4.7E-11 63.6 10.5 120 2-129 114-279 (312)
49 PRK10309 galactitol-1-phosphat 98.5 1.6E-06 3.5E-11 65.8 10.0 115 3-128 146-312 (347)
50 cd08260 Zn_ADH6 Alcohol dehydr 98.5 1.7E-06 3.7E-11 65.5 10.0 117 2-129 149-312 (345)
51 cd08258 Zn_ADH4 Alcohol dehydr 98.5 1.7E-06 3.8E-11 64.7 9.8 107 2-125 148-306 (306)
52 PLN02178 cinnamyl-alcohol dehy 98.5 2.1E-06 4.6E-11 66.3 10.3 115 2-131 161-320 (375)
53 PRK09422 ethanol-active dehydr 98.5 2.5E-06 5.4E-11 64.3 10.4 117 2-131 147-308 (338)
54 cd08261 Zn_ADH7 Alcohol dehydr 98.5 2.2E-06 4.7E-11 64.7 10.0 116 2-129 144-303 (337)
55 cd08276 MDR7 Medium chain dehy 98.5 2.5E-06 5.4E-11 63.8 10.2 118 2-130 144-306 (336)
56 cd08252 AL_MDR Arginate lyase 98.5 3.4E-06 7.3E-11 63.3 11.0 122 2-131 128-305 (336)
57 TIGR02824 quinone_pig3 putativ 98.4 2.7E-06 5.8E-11 63.0 10.2 124 2-130 123-295 (325)
58 cd05276 p53_inducible_oxidored 98.4 3.1E-06 6.7E-11 62.5 10.4 119 2-130 123-295 (323)
59 cd08286 FDH_like_ADH2 formalde 98.4 2.4E-06 5.3E-11 64.6 10.0 116 2-129 150-310 (345)
60 TIGR01751 crot-CoA-red crotony 98.4 2.6E-06 5.7E-11 66.0 10.2 120 2-130 171-357 (398)
61 cd08249 enoyl_reductase_like e 98.4 2.6E-06 5.7E-11 64.5 9.6 118 2-130 128-306 (339)
62 cd08251 polyketide_synthase po 98.4 3.7E-06 8E-11 61.7 9.2 122 2-130 105-275 (303)
63 PLN02514 cinnamyl-alcohol dehy 98.4 5.4E-06 1.2E-10 63.4 10.3 116 2-132 164-323 (357)
64 cd08287 FDH_like_ADH3 formalde 98.4 5.4E-06 1.2E-10 62.7 10.1 116 2-129 153-313 (345)
65 cd08265 Zn_ADH3 Alcohol dehydr 98.4 4.1E-06 8.8E-11 64.7 9.4 118 2-129 186-353 (384)
66 cd08285 NADP_ADH NADP(H)-depen 98.3 3.5E-06 7.6E-11 64.0 8.8 113 2-129 151-316 (351)
67 TIGR02822 adh_fam_2 zinc-bindi 98.3 4.3E-06 9.2E-11 63.3 9.2 112 2-130 150-301 (329)
68 cd08241 QOR1 Quinone oxidoredu 98.3 9.2E-06 2E-10 60.0 10.7 124 2-130 123-294 (323)
69 cd08279 Zn_ADH_class_III Class 98.3 6.4E-06 1.4E-10 63.0 10.2 120 2-129 166-332 (363)
70 cd05279 Zn_ADH1 Liver alcohol 98.3 5.8E-06 1.2E-10 63.4 9.8 120 2-129 167-334 (365)
71 cd08238 sorbose_phosphate_red 98.3 2.8E-06 6.1E-11 66.2 8.0 108 12-129 169-336 (410)
72 cd05284 arabinose_DH_like D-ar 98.3 9.1E-06 2E-10 61.2 10.5 116 2-130 150-311 (340)
73 cd05195 enoyl_red enoyl reduct 98.3 5.2E-06 1.1E-10 60.3 8.8 120 2-131 92-266 (293)
74 cd08231 MDR_TM0436_like Hypoth 98.3 6.2E-06 1.3E-10 62.9 9.5 113 2-125 161-323 (361)
75 cd08275 MDR3 Medium chain dehy 98.3 1.7E-05 3.7E-10 59.2 11.7 124 2-130 122-307 (337)
76 cd08256 Zn_ADH2 Alcohol dehydr 98.3 6.1E-06 1.3E-10 62.6 9.0 115 2-129 159-319 (350)
77 TIGR03366 HpnZ_proposed putati 98.3 8.4E-06 1.8E-10 60.3 9.0 110 2-125 105-261 (280)
78 cd08236 sugar_DH NAD(P)-depend 98.3 1.5E-05 3.2E-10 60.2 10.3 119 2-128 144-310 (343)
79 cd08268 MDR2 Medium chain dehy 98.3 1.7E-05 3.7E-10 58.8 10.5 119 2-130 128-298 (328)
80 cd05278 FDH_like Formaldehyde 98.2 5.3E-06 1.2E-10 62.6 7.8 117 2-130 152-314 (347)
81 cd08235 iditol_2_DH_like L-idi 98.2 1.2E-05 2.6E-10 60.7 9.6 116 2-129 150-312 (343)
82 cd08254 hydroxyacyl_CoA_DH 6-h 98.2 2E-05 4.3E-10 59.1 10.4 117 2-130 149-309 (338)
83 cd08271 MDR5 Medium chain dehy 98.2 2.5E-05 5.5E-10 58.0 10.8 59 2-65 125-211 (325)
84 cd05285 sorbitol_DH Sorbitol d 98.2 1.8E-05 3.8E-10 60.0 9.7 114 2-128 147-308 (343)
85 cd08288 MDR_yhdh Yhdh putative 98.2 2.7E-05 5.8E-10 58.2 10.1 116 2-129 127-294 (324)
86 cd08289 MDR_yhfp_like Yhfp put 98.1 3.3E-05 7.1E-10 57.8 9.7 58 2-65 127-215 (326)
87 cd08270 MDR4 Medium chain dehy 98.1 3.2E-05 7E-10 57.2 9.6 120 2-130 117-275 (305)
88 smart00829 PKS_ER Enoylreducta 98.1 3.6E-05 7.8E-10 55.8 8.9 122 2-129 88-259 (288)
89 cd08284 FDH_like_2 Glutathione 98.1 4.8E-05 1E-09 57.4 9.8 116 1-129 151-312 (344)
90 cd08299 alcohol_DH_class_I_II_ 98.1 4.8E-05 1.1E-09 58.6 9.9 59 2-65 174-262 (373)
91 cd08262 Zn_ADH8 Alcohol dehydr 98.1 6E-05 1.3E-09 56.9 10.2 117 2-130 146-310 (341)
92 PRK10083 putative oxidoreducta 98.0 5.9E-05 1.3E-09 56.8 9.6 114 2-129 145-303 (339)
93 cd08272 MDR6 Medium chain dehy 98.0 0.0001 2.2E-09 54.6 10.6 120 2-130 128-295 (326)
94 cd05280 MDR_yhdh_yhfp Yhdh and 98.0 6.1E-05 1.3E-09 56.2 9.4 116 2-128 127-294 (325)
95 cd08266 Zn_ADH_like1 Alcohol d 98.0 0.00012 2.7E-09 54.5 10.8 119 2-130 150-312 (342)
96 cd08264 Zn_ADH_like2 Alcohol d 98.0 7.3E-05 1.6E-09 56.0 9.3 112 2-127 147-297 (325)
97 TIGR02823 oxido_YhdH putative 98.0 8.8E-05 1.9E-09 55.4 9.7 116 2-129 126-293 (323)
98 TIGR00692 tdh L-threonine 3-de 98.0 9.7E-05 2.1E-09 55.9 9.8 115 2-128 147-307 (340)
99 PF00107 ADH_zinc_N: Zinc-bind 98.0 4.9E-05 1.1E-09 49.6 7.0 93 22-123 16-129 (130)
100 COG1062 AdhC Zn-dependent alco 97.9 4.2E-05 9.1E-10 58.0 7.0 58 3-65 170-256 (366)
101 KOG0024 Sorbitol dehydrogenase 97.9 5.3E-05 1.2E-09 57.1 7.5 118 2-130 154-319 (354)
102 cd08247 AST1_like AST1 is a cy 97.9 6.4E-05 1.4E-09 57.0 8.1 60 2-65 134-227 (352)
103 cd08283 FDH_like_1 Glutathione 97.9 0.00015 3.2E-09 56.1 9.9 117 2-130 169-353 (386)
104 cd05188 MDR Medium chain reduc 97.9 0.00017 3.6E-09 52.1 9.3 58 2-65 118-203 (271)
105 cd08259 Zn_ADH5 Alcohol dehydr 97.8 0.00033 7.2E-09 52.3 10.5 29 2-32 147-175 (332)
106 cd08267 MDR1 Medium chain dehy 97.8 0.00023 5E-09 52.7 9.4 30 2-32 127-156 (319)
107 cd08234 threonine_DH_like L-th 97.8 0.00031 6.7E-09 52.7 10.2 110 2-129 144-303 (334)
108 cd05283 CAD1 Cinnamyl alcohol 97.8 0.0002 4.2E-09 54.2 9.0 114 2-131 154-310 (337)
109 cd08248 RTN4I1 Human Reticulon 97.8 0.00019 4.1E-09 54.2 8.9 52 2-55 142-224 (350)
110 COG1063 Tdh Threonine dehydrog 97.8 0.00017 3.6E-09 55.4 8.3 119 2-130 152-317 (350)
111 PRK13771 putative alcohol dehy 97.7 0.0002 4.3E-09 53.8 8.2 29 2-32 147-175 (334)
112 PRK05396 tdh L-threonine 3-deh 97.7 0.00032 7E-09 53.0 9.2 111 3-125 150-305 (341)
113 cd05289 MDR_like_2 alcohol deh 97.7 0.00058 1.3E-08 50.1 9.7 30 2-32 128-157 (309)
114 TIGR02819 fdhA_non_GSH formald 97.7 0.00054 1.2E-08 53.3 9.6 56 2-65 170-256 (393)
115 cd05281 TDH Threonine dehydrog 97.7 0.00037 8E-09 52.7 8.4 114 2-128 149-308 (341)
116 cd08232 idonate-5-DH L-idonate 97.6 0.00056 1.2E-08 51.5 9.4 28 2-32 150-177 (339)
117 PLN02702 L-idonate 5-dehydroge 97.6 0.0009 2E-08 51.1 9.8 109 4-128 168-328 (364)
118 cd08273 MDR8 Medium chain dehy 97.6 0.00071 1.5E-08 50.6 8.8 30 2-32 123-152 (331)
119 PF13602 ADH_zinc_N_2: Zinc-bi 97.5 0.00052 1.1E-08 44.6 6.8 24 111-134 80-103 (127)
120 cd08237 ribitol-5-phosphate_DH 97.5 0.0018 4E-08 49.2 10.4 29 2-32 145-175 (341)
121 cd08282 PFDH_like Pseudomonas 97.3 0.003 6.6E-08 48.6 9.6 56 2-65 161-245 (375)
122 cd08230 glucose_DH Glucose deh 97.3 0.0019 4.2E-08 49.2 8.5 32 90-126 286-317 (355)
123 TIGR01202 bchC 2-desacetyl-2-h 97.2 0.0029 6.3E-08 47.5 8.5 112 2-129 130-276 (308)
124 cd08245 CAD Cinnamyl alcohol d 97.1 0.0078 1.7E-07 45.1 10.2 28 2-32 147-174 (330)
125 cd08242 MDR_like Medium chain 97.1 0.0055 1.2E-07 45.8 9.4 26 4-32 142-167 (319)
126 KOG0022 Alcohol dehydrogenase, 97.1 0.0021 4.5E-08 48.6 6.3 57 4-65 178-264 (375)
127 cd08255 2-desacetyl-2-hydroxye 97.0 0.0078 1.7E-07 44.0 9.2 37 2-41 82-126 (277)
128 cd08298 CAD2 Cinnamyl alcohol 95.4 0.019 4E-07 43.0 3.7 28 2-32 152-179 (329)
129 KOG1201 Hydroxysteroid 17-beta 81.1 2.1 4.6E-05 32.3 3.4 35 18-54 37-80 (300)
130 PF01455 HupF_HypC: HupF/HypC 77.4 1.6 3.6E-05 25.5 1.5 14 14-28 36-49 (68)
131 COG0300 DltE Short-chain dehyd 76.2 3.5 7.7E-05 30.7 3.3 15 17-32 4-18 (265)
132 KOG1205 Predicted dehydrogenas 73.5 3.9 8.4E-05 30.8 2.9 14 18-32 11-24 (282)
133 TIGR00074 hypC_hupF hydrogenas 72.6 3.2 7E-05 24.9 1.9 14 14-28 34-47 (76)
134 PRK10409 hydrogenase assembly 71.0 3.5 7.5E-05 25.6 1.8 13 15-28 41-53 (90)
135 PRK10413 hydrogenase 2 accesso 69.4 3.8 8.3E-05 24.9 1.8 12 16-28 43-54 (82)
136 KOG0725 Reductases with broad 68.5 6.8 0.00015 29.1 3.3 28 18-46 7-42 (270)
137 PRK05872 short chain dehydroge 67.8 6.7 0.00014 29.1 3.2 27 18-45 8-42 (296)
138 PLN02780 ketoreductase/ oxidor 67.7 6.8 0.00015 29.6 3.2 27 18-45 52-86 (320)
139 PRK06057 short chain dehydroge 67.0 7.6 0.00016 27.8 3.3 26 18-44 6-39 (255)
140 TIGR03325 BphB_TodD cis-2,3-di 66.7 7.7 0.00017 28.0 3.3 28 18-46 4-39 (262)
141 PRK15181 Vi polysaccharide bio 66.6 4.5 9.8E-05 30.8 2.1 27 4-32 1-27 (348)
142 PRK05867 short chain dehydroge 66.1 8 0.00017 27.7 3.2 27 18-45 8-42 (253)
143 PRK06505 enoyl-(acyl carrier p 66.1 8.5 0.00018 28.2 3.4 28 18-46 6-43 (271)
144 PF08541 ACP_syn_III_C: 3-Oxoa 65.9 7.2 0.00016 23.4 2.6 24 7-31 57-80 (90)
145 PRK08085 gluconate 5-dehydroge 64.4 9.3 0.0002 27.3 3.3 27 18-45 8-42 (254)
146 PRK06200 2,3-dihydroxy-2,3-dih 63.9 9 0.00019 27.6 3.2 27 18-45 5-39 (263)
147 PF02073 Peptidase_M29: Thermo 63.1 9.2 0.0002 30.2 3.2 45 9-55 14-69 (398)
148 PRK08339 short chain dehydroge 63.0 10 0.00022 27.5 3.3 26 18-44 7-40 (263)
149 cd01078 NAD_bind_H4MPT_DH NADP 62.4 12 0.00025 26.0 3.4 14 18-32 27-40 (194)
150 PRK08589 short chain dehydroge 62.4 10 0.00022 27.7 3.2 28 18-46 5-40 (272)
151 PRK05786 fabG 3-ketoacyl-(acyl 62.4 10 0.00022 26.7 3.2 27 18-45 4-38 (238)
152 COG3967 DltE Short-chain dehyd 62.3 10 0.00022 27.6 3.0 27 19-46 5-39 (245)
153 PRK07825 short chain dehydroge 62.1 9.7 0.00021 27.6 3.1 14 18-32 4-17 (273)
154 PRK07814 short chain dehydroge 61.7 11 0.00024 27.2 3.3 26 18-44 9-42 (263)
155 PRK08628 short chain dehydroge 61.2 8.6 0.00019 27.5 2.6 28 18-46 6-41 (258)
156 PRK07523 gluconate 5-dehydroge 61.2 11 0.00024 26.9 3.2 27 18-45 9-43 (255)
157 PRK07063 short chain dehydroge 61.1 11 0.00025 27.0 3.3 26 18-44 6-39 (260)
158 PRK06603 enoyl-(acyl carrier p 61.1 12 0.00025 27.2 3.3 28 18-46 7-44 (260)
159 COG4221 Short-chain alcohol de 61.0 11 0.00024 27.8 3.1 14 18-32 5-18 (246)
160 PRK08159 enoyl-(acyl carrier p 60.1 13 0.00028 27.3 3.4 29 16-45 7-45 (272)
161 PRK06523 short chain dehydroge 59.9 9 0.00019 27.5 2.6 14 18-32 8-21 (260)
162 PRK06139 short chain dehydroge 59.6 10 0.00022 28.8 2.9 27 18-45 6-40 (330)
163 PRK06128 oxidoreductase; Provi 59.3 8.6 0.00019 28.5 2.4 26 18-44 54-87 (300)
164 PRK05993 short chain dehydroge 59.2 13 0.00028 27.1 3.3 14 18-32 3-16 (277)
165 PF12242 Eno-Rase_NADH_b: NAD( 58.8 12 0.00025 22.6 2.4 17 14-32 34-51 (78)
166 PRK08265 short chain dehydroge 58.6 13 0.00029 26.8 3.2 27 18-45 5-39 (261)
167 PRK07478 short chain dehydroge 58.3 14 0.0003 26.4 3.3 27 18-45 5-39 (254)
168 PRK06194 hypothetical protein; 57.7 13 0.00029 27.1 3.2 14 18-32 5-18 (287)
169 PRK12829 short chain dehydroge 57.5 16 0.00035 26.0 3.5 17 15-32 7-23 (264)
170 PRK05854 short chain dehydroge 57.3 14 0.0003 27.7 3.2 27 18-45 13-47 (313)
171 PRK06079 enoyl-(acyl carrier p 57.3 15 0.00033 26.4 3.4 36 18-55 6-51 (252)
172 PRK07062 short chain dehydroge 57.1 15 0.00033 26.4 3.3 27 18-45 7-41 (265)
173 PRK05717 oxidoreductase; Valid 56.9 15 0.00033 26.3 3.3 27 18-45 9-43 (255)
174 PRK05876 short chain dehydroge 56.8 15 0.00032 27.0 3.2 25 18-43 5-37 (275)
175 PRK09072 short chain dehydroge 56.2 15 0.00033 26.4 3.2 26 18-44 4-37 (263)
176 PRK08415 enoyl-(acyl carrier p 56.0 16 0.00034 26.9 3.3 27 18-45 4-40 (274)
177 PRK06500 short chain dehydroge 55.8 16 0.00035 25.8 3.3 14 18-32 5-18 (249)
178 PRK12742 oxidoreductase; Provi 55.8 8 0.00017 27.2 1.7 25 18-43 5-37 (237)
179 PRK06197 short chain dehydroge 55.6 14 0.0003 27.4 3.0 27 18-45 15-49 (306)
180 PRK06841 short chain dehydroge 55.5 17 0.00036 25.9 3.3 27 18-45 14-48 (255)
181 PRK06935 2-deoxy-D-gluconate 3 55.3 16 0.00035 26.2 3.2 26 18-44 14-47 (258)
182 PRK07831 short chain dehydroge 55.1 19 0.00041 25.9 3.6 25 16-41 14-47 (262)
183 PRK09186 flagellin modificatio 55.0 17 0.00037 25.9 3.3 14 18-32 3-16 (256)
184 PRK07035 short chain dehydroge 54.5 17 0.00036 25.9 3.2 26 18-44 7-40 (252)
185 PRK05866 short chain dehydroge 54.4 15 0.00034 27.2 3.1 27 18-45 39-73 (293)
186 PRK13394 3-hydroxybutyrate deh 54.1 18 0.00038 25.8 3.3 26 18-44 6-39 (262)
187 PLN02253 xanthoxin dehydrogena 53.8 17 0.00038 26.3 3.2 26 18-44 17-50 (280)
188 PRK06196 oxidoreductase; Provi 53.7 17 0.00037 27.1 3.2 27 18-45 25-59 (315)
189 PRK07453 protochlorophyllide o 53.5 17 0.00036 27.2 3.2 14 18-32 5-18 (322)
190 PRK07774 short chain dehydroge 53.4 18 0.00039 25.6 3.2 27 18-45 5-39 (250)
191 PRK07533 enoyl-(acyl carrier p 53.1 20 0.00042 25.9 3.4 27 18-45 9-45 (258)
192 PRK06172 short chain dehydroge 52.7 19 0.00042 25.6 3.3 27 18-45 6-40 (253)
193 PRK08945 putative oxoacyl-(acy 52.4 21 0.00046 25.3 3.5 17 15-32 8-24 (247)
194 PRK09291 short chain dehydroge 51.8 19 0.0004 25.6 3.1 25 19-44 2-34 (257)
195 PLN03209 translocon at the inn 51.7 19 0.00041 30.0 3.3 32 13-45 74-113 (576)
196 PRK12823 benD 1,6-dihydroxycyc 51.7 21 0.00045 25.5 3.3 14 18-32 7-20 (260)
197 PRK06124 gluconate 5-dehydroge 51.5 21 0.00045 25.5 3.3 27 18-45 10-44 (256)
198 PRK08226 short chain dehydroge 51.5 21 0.00045 25.6 3.3 28 18-46 5-40 (263)
199 PRK07109 short chain dehydroge 51.4 18 0.0004 27.4 3.1 27 18-45 7-41 (334)
200 PRK08643 acetoin reductase; Va 51.4 21 0.00046 25.4 3.3 25 19-44 2-34 (256)
201 PRK07904 short chain dehydroge 51.0 10 0.00022 27.4 1.6 17 15-32 4-20 (253)
202 PRK06125 short chain dehydroge 50.5 21 0.00047 25.5 3.2 27 18-45 6-40 (259)
203 PRK08703 short chain dehydroge 50.1 24 0.00052 24.9 3.4 14 18-32 5-18 (239)
204 PRK06398 aldose dehydrogenase; 50.1 15 0.00033 26.5 2.4 14 18-32 5-18 (258)
205 PRK06171 sorbitol-6-phosphate 50.0 16 0.00034 26.3 2.5 14 18-32 8-21 (266)
206 PRK08862 short chain dehydroge 49.7 21 0.00046 25.4 3.1 27 18-45 4-38 (227)
207 PRK07024 short chain dehydroge 49.7 21 0.00046 25.6 3.1 24 19-43 2-33 (257)
208 KOG1208 Dehydrogenases with di 49.6 24 0.00052 26.9 3.5 28 18-46 34-69 (314)
209 PRK06138 short chain dehydroge 49.6 23 0.0005 25.0 3.3 27 18-45 4-38 (252)
210 PRK06113 7-alpha-hydroxysteroi 49.6 23 0.0005 25.3 3.3 27 18-45 10-44 (255)
211 PRK07890 short chain dehydroge 49.5 25 0.00055 25.0 3.5 14 18-32 4-17 (258)
212 PRK07576 short chain dehydroge 49.3 23 0.00049 25.6 3.2 14 18-32 8-21 (264)
213 PRK06483 dihydromonapterin red 49.0 24 0.00052 24.8 3.3 26 19-45 2-35 (236)
214 PRK07231 fabG 3-ketoacyl-(acyl 48.9 24 0.00052 24.9 3.2 14 18-32 4-17 (251)
215 PRK12828 short chain dehydroge 48.7 12 0.00027 26.1 1.7 14 18-32 6-19 (239)
216 PF07378 FlbT: Flagellar prote 48.5 11 0.00023 24.9 1.2 13 15-28 4-16 (126)
217 PRK06949 short chain dehydroge 48.4 23 0.0005 25.2 3.1 15 17-32 7-21 (258)
218 PRK06914 short chain dehydroge 48.4 25 0.00055 25.4 3.4 14 18-32 2-15 (280)
219 PRK08213 gluconate 5-dehydroge 48.1 24 0.00052 25.2 3.2 14 18-32 11-24 (259)
220 PRK06114 short chain dehydroge 48.0 17 0.00037 26.0 2.4 26 18-44 7-40 (254)
221 PRK08936 glucose-1-dehydrogena 47.9 17 0.00037 26.1 2.4 26 18-44 6-39 (261)
222 PRK09242 tropinone reductase; 47.7 25 0.00054 25.1 3.2 26 18-44 8-41 (257)
223 PRK07984 enoyl-(acyl carrier p 47.5 26 0.00057 25.5 3.3 27 18-45 5-41 (262)
224 PRK07677 short chain dehydroge 47.4 25 0.00054 25.1 3.2 13 19-32 1-13 (252)
225 PRK08690 enoyl-(acyl carrier p 47.1 27 0.00059 25.2 3.3 27 18-45 5-41 (261)
226 PRK00794 flbT flagellar biosyn 46.6 11 0.00025 25.0 1.2 14 14-28 6-19 (132)
227 PRK08277 D-mannonate oxidoredu 46.2 26 0.00057 25.4 3.2 26 18-44 9-42 (278)
228 PRK12791 flbT flagellar biosyn 46.1 12 0.00025 24.9 1.1 14 14-28 5-18 (131)
229 TIGR03206 benzo_BadH 2-hydroxy 45.7 29 0.00063 24.5 3.3 14 18-32 2-15 (250)
230 PRK06484 short chain dehydroge 45.6 26 0.00057 28.1 3.3 28 17-45 267-302 (520)
231 PRK12743 oxidoreductase; Provi 45.6 20 0.00043 25.7 2.4 24 19-43 2-33 (256)
232 PRK08251 short chain dehydroge 45.3 27 0.00058 24.7 3.1 13 19-32 2-14 (248)
233 PRK08416 7-alpha-hydroxysteroi 45.3 14 0.00029 26.7 1.5 25 18-43 7-39 (260)
234 PRK12744 short chain dehydroge 45.2 26 0.00057 25.0 3.0 25 18-43 7-40 (257)
235 PRK07060 short chain dehydroge 45.1 29 0.00062 24.4 3.2 14 18-32 8-21 (245)
236 PRK07985 oxidoreductase; Provi 45.0 21 0.00046 26.4 2.6 25 18-43 48-80 (294)
237 TIGR01832 kduD 2-deoxy-D-gluco 44.8 14 0.00031 26.1 1.6 14 18-32 4-17 (248)
238 PRK05875 short chain dehydroge 44.4 30 0.00065 25.0 3.2 27 18-45 6-40 (276)
239 PRK08303 short chain dehydroge 44.4 19 0.00042 26.9 2.2 26 18-44 7-40 (305)
240 PRK07791 short chain dehydroge 44.2 20 0.00044 26.4 2.3 25 17-42 4-36 (286)
241 PRK06720 hypothetical protein; 43.8 33 0.00071 23.5 3.1 27 18-45 15-49 (169)
242 PRK06180 short chain dehydroge 43.6 31 0.00067 25.1 3.2 14 18-32 3-16 (277)
243 COG1086 Predicted nucleoside-d 43.5 26 0.00056 29.1 2.9 14 18-32 249-262 (588)
244 PRK12367 short chain dehydroge 43.2 15 0.00033 26.6 1.5 14 18-32 13-26 (245)
245 PRK07806 short chain dehydroge 43.1 17 0.00036 25.8 1.7 14 18-32 5-18 (248)
246 PRK07067 sorbitol dehydrogenas 42.9 34 0.00074 24.4 3.3 14 18-32 5-18 (257)
247 PRK07097 gluconate 5-dehydroge 42.6 35 0.00076 24.5 3.3 27 18-45 9-43 (265)
248 PRK12481 2-deoxy-D-gluconate 3 42.3 16 0.00035 26.2 1.5 24 18-42 7-38 (251)
249 PRK08063 enoyl-(acyl carrier p 41.8 19 0.00041 25.5 1.8 23 18-41 3-33 (250)
250 PRK06101 short chain dehydroge 41.8 29 0.00064 24.6 2.8 24 22-45 3-34 (240)
251 PRK07856 short chain dehydroge 41.5 17 0.00037 25.9 1.5 14 18-32 5-18 (252)
252 PRK12939 short chain dehydroge 41.4 37 0.00079 23.9 3.3 26 18-44 6-39 (250)
253 TIGR01289 LPOR light-dependent 41.3 37 0.0008 25.4 3.4 27 18-45 2-37 (314)
254 PRK06182 short chain dehydroge 41.1 37 0.0008 24.5 3.3 14 18-32 2-15 (273)
255 PLN02653 GDP-mannose 4,6-dehyd 41.0 20 0.00043 27.0 1.9 14 18-32 5-18 (340)
256 PRK08278 short chain dehydroge 40.9 24 0.00053 25.6 2.3 26 18-44 5-38 (273)
257 PF01135 PCMT: Protein-L-isoas 40.0 38 0.00082 24.2 3.1 22 10-32 64-85 (209)
258 PRK12747 short chain dehydroge 39.9 20 0.00043 25.5 1.7 24 18-42 3-34 (252)
259 PRK07792 fabG 3-ketoacyl-(acyl 39.7 26 0.00056 26.1 2.3 26 18-44 11-44 (306)
260 PRK06484 short chain dehydroge 39.7 35 0.00075 27.4 3.2 26 18-44 4-37 (520)
261 TIGR01963 PHB_DH 3-hydroxybuty 39.4 36 0.00078 24.0 3.0 13 19-32 1-13 (255)
262 PRK07074 short chain dehydroge 39.1 42 0.0009 23.9 3.3 13 19-32 2-14 (257)
263 PRK08267 short chain dehydroge 39.1 35 0.00077 24.4 2.9 11 22-32 3-13 (260)
264 PRK12384 sorbitol-6-phosphate 38.7 39 0.00084 24.1 3.0 25 19-44 2-34 (259)
265 PRK12937 short chain dehydroge 37.9 21 0.00046 25.1 1.6 26 18-44 4-37 (245)
266 PRK12429 3-hydroxybutyrate deh 37.6 22 0.00047 25.3 1.5 14 18-32 3-16 (258)
267 PRK08217 fabG 3-ketoacyl-(acyl 37.6 21 0.00047 25.1 1.5 14 18-32 4-17 (253)
268 PRK05693 short chain dehydroge 36.7 38 0.00083 24.5 2.8 11 22-32 3-13 (274)
269 PRK09135 pteridine reductase; 36.7 23 0.0005 24.9 1.6 24 18-42 5-36 (249)
270 PRK08340 glucose-1-dehydrogena 36.7 38 0.00082 24.3 2.7 24 22-45 2-33 (259)
271 PRK08264 short chain dehydroge 36.5 23 0.0005 24.9 1.5 14 18-32 5-18 (238)
272 PRK12935 acetoacetyl-CoA reduc 36.5 23 0.0005 25.0 1.5 25 18-43 5-37 (247)
273 PRK12938 acetyacetyl-CoA reduc 36.4 24 0.00052 24.9 1.6 23 18-41 2-32 (246)
274 PRK08017 oxidoreductase; Provi 36.3 42 0.0009 23.8 2.9 11 22-32 4-14 (256)
275 PRK07326 short chain dehydroge 36.1 26 0.00055 24.6 1.7 14 18-32 5-18 (237)
276 PRK05653 fabG 3-ketoacyl-(acyl 36.0 24 0.00052 24.7 1.6 14 18-32 4-17 (246)
277 PRK08263 short chain dehydroge 35.9 47 0.001 24.1 3.1 13 19-32 3-15 (275)
278 TIGR03589 PseB UDP-N-acetylglu 35.9 23 0.0005 26.7 1.5 14 18-32 3-16 (324)
279 cd04493 BRCA2DBD_OB1 BRCA2DBD_ 35.9 43 0.00093 21.2 2.5 20 9-29 44-63 (100)
280 PRK09134 short chain dehydroge 35.9 25 0.00054 25.2 1.7 23 18-41 8-38 (258)
281 PRK08324 short chain dehydroge 35.8 41 0.0009 28.3 3.1 14 18-32 421-434 (681)
282 PRK07454 short chain dehydroge 35.7 60 0.0013 22.8 3.6 15 17-32 4-18 (241)
283 PRK08261 fabG 3-ketoacyl-(acyl 35.6 15 0.00033 28.9 0.5 19 13-32 28-50 (450)
284 PRK08642 fabG 3-ketoacyl-(acyl 35.5 25 0.00055 24.8 1.6 24 18-42 4-35 (253)
285 PRK08594 enoyl-(acyl carrier p 35.0 48 0.001 23.9 3.0 26 18-44 6-41 (257)
286 PRK05565 fabG 3-ketoacyl-(acyl 35.0 53 0.0012 23.0 3.2 23 19-42 5-35 (247)
287 PRK06463 fabG 3-ketoacyl-(acyl 34.8 27 0.00057 25.0 1.6 25 18-43 6-38 (255)
288 PRK12936 3-ketoacyl-(acyl-carr 34.7 26 0.00057 24.6 1.6 14 18-32 5-18 (245)
289 TIGR02632 RhaD_aldol-ADH rhamn 34.2 47 0.001 28.1 3.2 27 18-45 413-447 (676)
290 smart00739 KOW KOW (Kyprides, 34.1 44 0.00096 14.9 1.9 13 16-29 2-14 (28)
291 PRK12746 short chain dehydroge 33.7 28 0.00061 24.7 1.6 23 18-41 5-35 (254)
292 PLN02989 cinnamyl-alcohol dehy 33.6 25 0.00053 26.2 1.4 14 18-32 4-17 (325)
293 PRK06953 short chain dehydroge 33.3 57 0.0012 22.7 3.1 11 22-32 3-13 (222)
294 PF00106 adh_short: short chai 33.2 24 0.00052 23.2 1.1 20 22-41 2-29 (167)
295 PRK05557 fabG 3-ketoacyl-(acyl 33.1 29 0.00062 24.3 1.6 26 18-44 4-37 (248)
296 PLN02730 enoyl-[acyl-carrier-p 32.6 57 0.0012 24.6 3.2 23 18-41 8-40 (303)
297 TIGR02622 CDP_4_6_dhtase CDP-g 32.6 30 0.00065 26.2 1.7 14 18-32 3-16 (349)
298 COG5443 FlbT Flagellar biosynt 32.6 30 0.00065 23.0 1.4 14 14-28 7-20 (148)
299 PRK07577 short chain dehydroge 32.5 31 0.00067 24.1 1.7 14 18-32 2-15 (234)
300 PRK08993 2-deoxy-D-gluconate 3 32.5 30 0.00065 24.7 1.6 14 18-32 9-22 (253)
301 PRK12825 fabG 3-ketoacyl-(acyl 32.3 30 0.00064 24.2 1.5 14 18-32 5-18 (249)
302 PRK12827 short chain dehydroge 31.9 32 0.00069 24.2 1.7 23 18-41 5-35 (249)
303 PRK07424 bifunctional sterol d 31.7 29 0.00063 27.5 1.5 14 18-32 177-190 (406)
304 PRK07102 short chain dehydroge 31.7 59 0.0013 22.9 3.0 23 22-44 3-33 (243)
305 PRK10538 malonic semialdehyde 31.6 57 0.0012 23.2 2.9 24 22-45 2-33 (248)
306 PRK12826 3-ketoacyl-(acyl-carr 31.1 32 0.00068 24.2 1.5 27 18-45 5-39 (251)
307 PLN02572 UDP-sulfoquinovose sy 31.0 30 0.00065 27.5 1.5 14 18-32 46-59 (442)
308 PF14805 THDPS_N_2: Tetrahydro 30.7 78 0.0017 18.6 2.9 24 110-133 25-48 (70)
309 PRK06077 fabG 3-ketoacyl-(acyl 30.5 35 0.00075 24.1 1.7 25 18-43 5-37 (252)
310 PRK05599 hypothetical protein; 30.5 55 0.0012 23.4 2.7 24 22-45 2-32 (246)
311 PLN02986 cinnamyl-alcohol dehy 30.4 31 0.00068 25.6 1.5 14 18-32 4-17 (322)
312 PLN02583 cinnamoyl-CoA reducta 30.1 35 0.00075 25.3 1.6 14 18-32 5-18 (297)
313 PRK06701 short chain dehydroge 30.0 33 0.00072 25.3 1.5 24 18-42 45-76 (290)
314 PRK07832 short chain dehydroge 30.0 60 0.0013 23.5 2.9 20 22-41 2-29 (272)
315 PRK06198 short chain dehydroge 29.9 34 0.00073 24.4 1.5 22 18-40 5-34 (260)
316 PRK07370 enoyl-(acyl carrier p 29.8 52 0.0011 23.7 2.5 25 18-43 5-39 (258)
317 PRK06179 short chain dehydroge 29.6 34 0.00074 24.6 1.5 14 18-32 3-16 (270)
318 PRK06550 fabG 3-ketoacyl-(acyl 29.3 34 0.00074 23.9 1.5 14 18-32 4-17 (235)
319 COG1028 FabG Dehydrogenases wi 29.2 36 0.00077 24.1 1.5 26 18-44 4-37 (251)
320 PRK06482 short chain dehydroge 28.9 68 0.0015 23.1 3.0 12 20-32 3-14 (276)
321 PRK08220 2,3-dihydroxybenzoate 28.7 38 0.00083 23.9 1.6 14 18-32 7-20 (252)
322 PRK06181 short chain dehydroge 28.7 34 0.00073 24.5 1.3 13 19-32 1-13 (263)
323 PRK05650 short chain dehydroge 28.5 72 0.0016 23.0 3.1 23 22-44 2-32 (270)
324 COG0298 HypC Hydrogenase matur 28.0 46 0.001 20.2 1.6 13 15-28 38-50 (82)
325 PF10686 DUF2493: Protein of u 27.7 57 0.0012 19.1 1.9 25 6-32 20-45 (71)
326 PF09103 BRCA-2_OB1: BRCA2, ol 27.1 70 0.0015 20.7 2.5 21 8-29 55-75 (118)
327 PRK05855 short chain dehydroge 27.0 73 0.0016 25.6 3.1 27 18-45 314-348 (582)
328 PRK07201 short chain dehydroge 26.9 70 0.0015 26.5 3.0 27 18-45 370-404 (657)
329 PLN02662 cinnamyl-alcohol dehy 26.9 37 0.00079 25.1 1.3 14 18-32 3-16 (322)
330 PRK07666 fabG 3-ketoacyl-(acyl 26.8 88 0.0019 21.9 3.2 24 18-42 6-37 (239)
331 PRK06300 enoyl-(acyl carrier p 26.8 55 0.0012 24.6 2.2 25 18-43 7-41 (299)
332 PRK07069 short chain dehydroge 26.7 68 0.0015 22.6 2.6 23 22-44 1-31 (251)
333 TIGR02415 23BDH acetoin reduct 26.2 77 0.0017 22.4 2.8 23 22-44 2-32 (254)
334 PLN00141 Tic62-NAD(P)-related 26.1 42 0.00091 24.0 1.5 14 18-32 16-29 (251)
335 PRK08177 short chain dehydroge 26.1 79 0.0017 22.0 2.8 11 22-32 3-13 (225)
336 PRK09009 C factor cell-cell si 25.8 40 0.00086 23.6 1.3 11 22-32 2-12 (235)
337 PLN02686 cinnamoyl-CoA reducta 25.7 42 0.00091 25.8 1.4 16 16-32 50-65 (367)
338 PRK06123 short chain dehydroge 25.6 46 0.001 23.4 1.6 24 19-43 2-33 (248)
339 COG2518 Pcm Protein-L-isoaspar 25.4 75 0.0016 22.9 2.6 21 11-32 65-85 (209)
340 PLN02240 UDP-glucose 4-epimera 25.4 47 0.001 25.0 1.6 14 18-32 4-17 (352)
341 PRK06997 enoyl-(acyl carrier p 25.3 1E+02 0.0022 22.3 3.3 25 18-43 5-39 (260)
342 PRK05476 S-adenosyl-L-homocyst 25.2 1.2E+02 0.0025 24.4 3.8 34 3-38 195-237 (425)
343 TIGR01829 AcAcCoA_reduct aceto 25.1 44 0.00096 23.3 1.4 23 22-44 2-32 (242)
344 PF02353 CMAS: Mycolic acid cy 24.5 82 0.0018 23.5 2.7 23 9-32 53-75 (273)
345 PRK05884 short chain dehydroge 24.4 80 0.0017 22.2 2.6 23 22-44 2-32 (223)
346 PLN02206 UDP-glucuronate decar 24.3 52 0.0011 26.2 1.8 14 18-32 118-131 (442)
347 PRK07023 short chain dehydroge 24.1 45 0.00097 23.5 1.3 11 22-32 3-13 (243)
348 TIGR01472 gmd GDP-mannose 4,6- 24.0 47 0.001 25.0 1.4 11 22-32 2-12 (343)
349 cd00401 AdoHcyase S-adenosyl-L 24.0 1.7E+02 0.0036 23.4 4.5 37 3-41 185-230 (413)
350 PLN02896 cinnamyl-alcohol dehy 23.9 49 0.0011 25.0 1.5 16 16-32 7-22 (353)
351 PRK07775 short chain dehydroge 23.6 51 0.0011 23.9 1.5 14 18-32 9-22 (274)
352 PLN00198 anthocyanidin reducta 23.1 52 0.0011 24.7 1.5 14 18-32 8-21 (338)
353 COG0623 FabI Enoyl-[acyl-carri 23.0 98 0.0021 23.0 2.8 37 17-55 4-50 (259)
354 PLN02214 cinnamoyl-CoA reducta 22.6 58 0.0013 24.7 1.7 15 17-32 8-22 (342)
355 PF01041 DegT_DnrJ_EryC1: DegT 22.5 1.1E+02 0.0024 23.4 3.2 26 2-28 48-73 (363)
356 PRK06947 glucose-1-dehydrogena 22.3 54 0.0012 23.1 1.4 21 22-42 4-32 (248)
357 COG4778 PhnL ABC-type phosphon 22.3 63 0.0014 23.0 1.6 17 15-32 33-49 (235)
358 TIGR02685 pter_reduc_Leis pter 22.2 52 0.0011 23.7 1.3 21 22-42 3-31 (267)
359 TIGR02703 carboxysome_A carbox 22.1 57 0.0012 19.8 1.2 15 15-30 43-57 (81)
360 COG1889 NOP1 Fibrillarin-like 21.8 77 0.0017 23.0 2.0 32 13-45 71-110 (231)
361 PLN02854 3-ketoacyl-CoA syntha 21.6 99 0.0021 25.5 2.9 28 4-32 454-484 (521)
362 PLN02192 3-ketoacyl-CoA syntha 21.2 1.1E+02 0.0023 25.3 3.0 28 4-32 442-472 (511)
363 PRK08125 bifunctional UDP-gluc 21.2 60 0.0013 27.2 1.6 15 17-32 313-327 (660)
364 KOG0820 Ribosomal RNA adenine 20.7 2.1E+02 0.0045 21.9 4.2 46 8-55 48-98 (315)
365 COG4619 ABC-type uncharacteriz 20.6 70 0.0015 22.8 1.6 17 15-32 25-41 (223)
366 PRK09730 putative NAD(P)-bindi 20.1 59 0.0013 22.8 1.2 20 22-41 3-30 (247)
367 PRK09424 pntA NAD(P) transhydr 20.0 1.7E+02 0.0038 24.0 3.9 15 16-32 162-176 (509)
368 COG3007 Uncharacterized paraqu 20.0 1.3E+02 0.0028 23.2 3.0 21 12-32 33-53 (398)
No 1
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=99.91 E-value=2.5e-24 Score=157.70 Aligned_cols=127 Identities=39% Similarity=0.593 Sum_probs=112.3
Q ss_pred CchHhHHHHHHhhcCCCCCCeEEEEecCCcce--------------------------e---ecCCceEeecCccccHHH
Q 039288 1 MPGLTAYANLFENFSPKMGEEYVFISAAFSSV--------------------------Y---RSGFDDAFNYKEELDLNA 51 (138)
Q Consensus 1 ~~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv--------------------------~---~lGad~vi~~~~~~~~~~ 51 (138)
||++|||++|.+.++.++|| +|+|+||||+| | .||+|.+|||+++ ||.+
T Consensus 133 mpG~TAY~gLl~igqpk~Ge-tvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~-d~~~ 210 (340)
T COG2130 133 MPGLTAYFGLLDIGQPKAGE-TVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAE-DFAQ 210 (340)
T ss_pred CchHHHHHHHHHhcCCCCCC-EEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCceeeecCcc-cHHH
Confidence 79999999999999999999 99999999999 1 6999999999999 9999
Q ss_pred HHhhhhccCCCCcc-----------cc---------eeeeeeeeeecCCC-CCcchhcHHHHHhcCeeeeeeeec-cccc
Q 039288 52 TLKRSVRFFPTCHQ-----------TA---------ALRFCEMTSQYNLD-LPENVHNLMFVVFGRSRMQGFIVF-DYSS 109 (138)
Q Consensus 52 ~v~~~~~~t~~gvd-----------d~---------~~~~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 109 (138)
++++ .+|+|+| |+ |++.||.++.||.. .+..|..+..++.++++++||.+. .+..
T Consensus 211 ~L~~---a~P~GIDvyfeNVGg~v~DAv~~~ln~~aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~ 287 (340)
T COG2130 211 ALKE---ACPKGIDVYFENVGGEVLDAVLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQ 287 (340)
T ss_pred HHHH---HCCCCeEEEEEcCCchHHHHHHHhhccccceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhh
Confidence 9999 9999999 22 89999999999765 455667777788899999999994 4555
Q ss_pred hHHHHHHHHHHHHHhCCceecee
Q 039288 110 VYPEFLEMILPYIREKARLSMRK 132 (138)
Q Consensus 110 ~~~~~~~~~~~~~~~g~l~~~~~ 132 (138)
..+++.+++..|+++|||+..++
T Consensus 288 ~~~e~~~~l~~wv~~GKi~~~et 310 (340)
T COG2130 288 RFPEALRELGGWVKEGKIQYRET 310 (340)
T ss_pred hhHHHHHHHHHHHHcCceeeEee
Confidence 56689999999999999998873
No 2
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.86 E-value=2.4e-21 Score=141.79 Aligned_cols=129 Identities=53% Similarity=0.887 Sum_probs=114.1
Q ss_pred CchHhHHHHHHhhcCCCCCCeEEEEecCCcce-----------------------------eecCCceEeecCccccHHH
Q 039288 1 MPGLTAYANLFENFSPKMGEEYVFISAAFSSV-----------------------------YRSGFDDAFNYKEELDLNA 51 (138)
Q Consensus 1 ~~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv-----------------------------~~lGad~vi~~~~~~~~~~ 51 (138)
|+++|||..+++.+.+++|+ +|+|+||||+| -++|.|.+|||++++++.+
T Consensus 136 m~glTAy~Gf~ei~~pk~ge-Tv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~ 214 (343)
T KOG1196|consen 136 MPGLTAYAGFYEICSPKKGE-TVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSA 214 (343)
T ss_pred CchhHHHHHHHHhcCCCCCC-EEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCCccceeccCccCHHH
Confidence 78999999999999999999 99999999999 1789999999998767899
Q ss_pred HHhhhhccCCCCcc-----------cc---------eeeeeeeeeecCCCCCcchhcHHHHHhcCeeeeeeeeccccchH
Q 039288 52 TLKRSVRFFPTCHQ-----------TA---------ALRFCEMTSQYNLDLPENVHNLMFVVFGRSRMQGFIVFDYSSVY 111 (138)
Q Consensus 52 ~v~~~~~~t~~gvd-----------d~---------~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (138)
++++ .+++|+| |+ |++.||+++.||...+.+-.++...+.|++++++|.+.++...+
T Consensus 215 aL~r---~~P~GIDiYfeNVGG~~lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~ 291 (343)
T KOG1196|consen 215 ALKR---CFPEGIDIYFENVGGKMLDAVLLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKY 291 (343)
T ss_pred HHHH---hCCCcceEEEeccCcHHHHHHHHhhhhccceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhhh
Confidence 9998 8899999 22 89999999999865554445667788899999999999988888
Q ss_pred HHHHHHHHHHHHhCCceeceee
Q 039288 112 PEFLEMILPYIREKARLSMRKA 133 (138)
Q Consensus 112 ~~~~~~~~~~~~~g~l~~~~~~ 133 (138)
.+.++.+.+++++|||+..++.
T Consensus 292 ~k~ld~l~~~ikegKI~y~edi 313 (343)
T KOG1196|consen 292 PKFLDFLLPYIKEGKITYVEDI 313 (343)
T ss_pred HHHHHHHHHHHhcCceEEehhH
Confidence 9999999999999999987764
No 3
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=99.75 E-value=3.3e-18 Score=123.24 Aligned_cols=127 Identities=18% Similarity=0.198 Sum_probs=99.1
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce----------------------------eecCCceEeecCccccHHHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV----------------------------YRSGFDDAFNYKEELDLNATL 53 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv----------------------------~~lGad~vi~~~~~~~~~~~v 53 (138)
.++|||..|++..+++||+ +||||+|+||| .+.|+.|+|+|+.+ |+.+++
T Consensus 130 q~lTAy~ll~e~y~vkpGh-tVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~akenG~~h~I~y~~e-D~v~~V 207 (336)
T KOG1197|consen 130 QGLTAYMLLFEAYNVKPGH-TVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAKENGAEHPIDYSTE-DYVDEV 207 (336)
T ss_pred HHHHHHHHHHHhcCCCCCC-EEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHHhcCCcceeeccch-hHHHHH
Confidence 5899999999999999999 99999999999 27899999999999 999999
Q ss_pred hhhhccC-CCCcc---cc-----------eeeeeeeeeecC-CCCCcchhcHHHHHhcCeeeeeeeecccc---chHHHH
Q 039288 54 KRSVRFF-PTCHQ---TA-----------ALRFCEMTSQYN-LDLPENVHNLMFVVFGRSRMQGFIVFDYS---SVYPEF 114 (138)
Q Consensus 54 ~~~~~~t-~~gvd---d~-----------~~~~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 114 (138)
.+ +| ++||| |. .+..-|.+.+++ .++.+.|+++..+..+++++.+-.+..|. .+....
T Consensus 208 ~k---iTngKGVd~vyDsvG~dt~~~sl~~Lk~~G~mVSfG~asgl~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~ 284 (336)
T KOG1197|consen 208 KK---ITNGKGVDAVYDSVGKDTFAKSLAALKPMGKMVSFGNASGLIDPIPLNQLSPKALQLVRPSLLGYIDGEVELVSY 284 (336)
T ss_pred Hh---ccCCCCceeeeccccchhhHHHHHHhccCceEEEeccccCCCCCeehhhcChhhhhhccHhhhcccCCHHHHHHH
Confidence 99 99 68999 32 344455555553 23334456677777788777765554553 234456
Q ss_pred HHHHHHHHHhCCceeceee
Q 039288 115 LEMILPYIREKARLSMRKA 133 (138)
Q Consensus 115 ~~~~~~~~~~g~l~~~~~~ 133 (138)
..+++.++.+|.|++.++.
T Consensus 285 v~rl~alvnsg~lk~~I~~ 303 (336)
T KOG1197|consen 285 VARLFALVNSGHLKIHIDH 303 (336)
T ss_pred HHHHHHHhhcCccceeeee
Confidence 7899999999999988864
No 4
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=99.74 E-value=1.7e-17 Score=125.43 Aligned_cols=124 Identities=23% Similarity=0.260 Sum_probs=96.8
Q ss_pred CchHhHHHHHHhhcCCCCCCeEEEEecCCcce----------------------------eecCCceEeecCccccHHHH
Q 039288 1 MPGLTAYANLFENFSPKMGEEYVFISAAFSSV----------------------------YRSGFDDAFNYKEELDLNAT 52 (138)
Q Consensus 1 ~~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv----------------------------~~lGad~vi~~~~~~~~~~~ 52 (138)
++++|||++|++.+++++|+ +||||||+||| .++|||++|||+++ +|.++
T Consensus 125 ~~~~TA~~~l~~~~~l~~g~-~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~lGAd~vi~y~~~-~~~~~ 202 (326)
T COG0604 125 LAGLTAWLALFDRAGLKPGE-TVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKELGADHVINYREE-DFVEQ 202 (326)
T ss_pred HHHHHHHHHHHHhcCCCCCC-EEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHhcCCCEEEcCCcc-cHHHH
Confidence 36899999999999999999 99999999999 28899999999999 99999
Q ss_pred HhhhhccCC-CCcc---cc-----------------eeeeeeeeeecCCCCCcchhcHHHHHhcCeeeeeeeeccc-cch
Q 039288 53 LKRSVRFFP-TCHQ---TA-----------------ALRFCEMTSQYNLDLPENVHNLMFVVFGRSRMQGFIVFDY-SSV 110 (138)
Q Consensus 53 v~~~~~~t~-~gvd---d~-----------------~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 110 (138)
+++ +|+ +||| |. +++.||..++ .+..+.++..++.++++..++..... ++.
T Consensus 203 v~~---~t~g~gvDvv~D~vG~~~~~~~l~~l~~~G~lv~ig~~~g----~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 275 (326)
T COG0604 203 VRE---LTGGKGVDVVLDTVGGDTFAASLAALAPGGRLVSIGALSG----GPPVPLNLLPLLGKRLTLRGVTLGSRDPEA 275 (326)
T ss_pred HHH---HcCCCCceEEEECCCHHHHHHHHHHhccCCEEEEEecCCC----CCccccCHHHHhhccEEEEEecceecchHH
Confidence 999 885 5999 32 5666665543 12223345556667777777654421 255
Q ss_pred HHHHHHHHHHHHHhCCceeceee
Q 039288 111 YPEFLEMILPYIREKARLSMRKA 133 (138)
Q Consensus 111 ~~~~~~~~~~~~~~g~l~~~~~~ 133 (138)
..+.++++++++++|++++.++.
T Consensus 276 ~~~~~~~l~~~~~~g~l~~~i~~ 298 (326)
T COG0604 276 LAEALAELFDLLASGKLKPVIDR 298 (326)
T ss_pred HHHHHHHHHHHHHcCCCcceecc
Confidence 67788999999999999999873
No 5
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=99.55 E-value=5e-14 Score=107.29 Aligned_cols=127 Identities=43% Similarity=0.736 Sum_probs=92.1
Q ss_pred CchHhHHHHHHhhcCCCCCCeEEEEecCCcce----------------------------e-ecCCceEeecCc-cccHH
Q 039288 1 MPGLTAYANLFENFSPKMGEEYVFISAAFSSV----------------------------Y-RSGFDDAFNYKE-ELDLN 50 (138)
Q Consensus 1 ~~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv----------------------------~-~lGad~vi~~~~-~~~~~ 50 (138)
++++|||++|.+.+++++|+ +|||+||+|++ . ++|+++++||++ . ++.
T Consensus 141 ~~~~TA~~al~~~~~~~~g~-~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~-~~~ 218 (348)
T PLN03154 141 MAGFTAYAGFYEVCSPKKGD-SVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEP-DLD 218 (348)
T ss_pred cHHHHHHHHHHHhcCCCCCC-EEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcc-cHH
Confidence 36899999998889999999 99999999988 1 589999999975 4 688
Q ss_pred HHHhhhhccCCCCcc---cc-----------------eeeeeeeeeecCCCCCcchhcHHHHHhcCeeeeeeeeccccch
Q 039288 51 ATLKRSVRFFPTCHQ---TA-----------------ALRFCEMTSQYNLDLPENVHNLMFVVFGRSRMQGFIVFDYSSV 110 (138)
Q Consensus 51 ~~v~~~~~~t~~gvd---d~-----------------~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (138)
+.+++ .+++|+| |. +++.+|.........+....+...++.+++++.+++...+...
T Consensus 219 ~~i~~---~~~~gvD~v~d~vG~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~ 295 (348)
T PLN03154 219 AALKR---YFPEGIDIYFDNVGGDMLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHL 295 (348)
T ss_pred HHHHH---HCCCCcEEEEECCCHHHHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHHHH
Confidence 88888 7766888 31 5566655432110000011244556778999998876544334
Q ss_pred HHHHHHHHHHHHHhCCceecee
Q 039288 111 YPEFLEMILPYIREKARLSMRK 132 (138)
Q Consensus 111 ~~~~~~~~~~~~~~g~l~~~~~ 132 (138)
.++.++++++++++|+|++.+.
T Consensus 296 ~~~~~~~~~~l~~~G~l~~~~~ 317 (348)
T PLN03154 296 FPQFLENVSRYYKQGKIVYIED 317 (348)
T ss_pred HHHHHHHHHHHHHCCCccCcee
Confidence 5567889999999999998764
No 6
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=99.51 E-value=1.7e-13 Score=102.69 Aligned_cols=124 Identities=35% Similarity=0.551 Sum_probs=89.8
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce----------------------------eecCCceEeecCccccHHHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV----------------------------YRSGFDDAFNYKEELDLNATL 53 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv----------------------------~~lGad~vi~~~~~~~~~~~v 53 (138)
+++|||++|.+.+++++|+ +||||||+|++ .++|+++++|++++ ++.+++
T Consensus 127 ~~~ta~~al~~~~~~~~g~-~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~Ga~~vi~~~~~-~~~~~v 204 (329)
T cd08294 127 PGLTAYFGLLEICKPKAGE-TVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGFDAVFNYKTV-SLEEAL 204 (329)
T ss_pred HHHHHHHHHHHhcCCCCCC-EEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCc-cHHHHH
Confidence 6899999998899999999 99999999999 16799999999988 899999
Q ss_pred hhhhccCCCCcc---cc-----------------eeeeeeeeeecCCCCC-cchhcHHHHHhcCeeeeeeeeccccchHH
Q 039288 54 KRSVRFFPTCHQ---TA-----------------ALRFCEMTSQYNLDLP-ENVHNLMFVVFGRSRMQGFIVFDYSSVYP 112 (138)
Q Consensus 54 ~~~~~~t~~gvd---d~-----------------~~~~~G~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (138)
++ .+++|+| |. +++.+|....++.... ..+.....+..+++++.+++...+....+
T Consensus 205 ~~---~~~~gvd~vld~~g~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 281 (329)
T cd08294 205 KE---AAPDGIDCYFDNVGGEFSSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWP 281 (329)
T ss_pred HH---HCCCCcEEEEECCCHHHHHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhHHHHH
Confidence 88 7667788 31 5555554333211101 01122334566788888766544323456
Q ss_pred HHHHHHHHHHHhCCceec
Q 039288 113 EFLEMILPYIREKARLSM 130 (138)
Q Consensus 113 ~~~~~~~~~~~~g~l~~~ 130 (138)
+.++++++++++|++++.
T Consensus 282 ~~~~~~~~l~~~g~i~~~ 299 (329)
T cd08294 282 EALKQLLKWIKEGKLKYR 299 (329)
T ss_pred HHHHHHHHHHHCCCCcCC
Confidence 678899999999999865
No 7
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=99.44 E-value=1.6e-12 Score=98.24 Aligned_cols=125 Identities=51% Similarity=0.846 Sum_probs=87.7
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce----------------------------ee-cCCceEeecCc-cccHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV----------------------------YR-SGFDDAFNYKE-ELDLNA 51 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv----------------------------~~-lGad~vi~~~~-~~~~~~ 51 (138)
+++|||++|.+.+++++|+ +|||+||+|++ .+ +|+++++||++ + ++.+
T Consensus 135 ~~~tA~~~l~~~~~~~~g~-~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~-~~~~ 212 (338)
T cd08295 135 PGLTAYAGFYEVCKPKKGE-TVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEP-DLDA 212 (338)
T ss_pred HHHHHHHHHHHhcCCCCCC-EEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcc-cHHH
Confidence 5789999998889999999 99999999998 13 89999999864 5 6888
Q ss_pred HHhhhhccCCCCcc---cc-----------------eeeeeeeeeecCCCCCcchhcHHHHHhcCeeeeeeeeccccchH
Q 039288 52 TLKRSVRFFPTCHQ---TA-----------------ALRFCEMTSQYNLDLPENVHNLMFVVFGRSRMQGFIVFDYSSVY 111 (138)
Q Consensus 52 ~v~~~~~~t~~gvd---d~-----------------~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (138)
.+++ .+++|+| |. +++.+|..............++..++.+++++.++....+....
T Consensus 213 ~i~~---~~~~gvd~v~d~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~ 289 (338)
T cd08295 213 ALKR---YFPNGIDIYFDNVGGKMLDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRY 289 (338)
T ss_pred HHHH---hCCCCcEEEEECCCHHHHHHHHHHhccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHHH
Confidence 8888 6666788 31 45555543221100000112334556678888876655444445
Q ss_pred HHHHHHHHHHHHhCCceece
Q 039288 112 PEFLEMILPYIREKARLSMR 131 (138)
Q Consensus 112 ~~~~~~~~~~~~~g~l~~~~ 131 (138)
.+.++++++++++|++++..
T Consensus 290 ~~~~~~~~~l~~~g~l~~~~ 309 (338)
T cd08295 290 PEFLEEMSGYIKEGKLKYVE 309 (338)
T ss_pred HHHHHHHHHHHHCCCeEcee
Confidence 66788999999999998754
No 8
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=99.40 E-value=3.3e-12 Score=96.02 Aligned_cols=126 Identities=35% Similarity=0.468 Sum_probs=85.7
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce----------------------------eecCCceEeecCccccHHHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV----------------------------YRSGFDDAFNYKEELDLNATL 53 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv----------------------------~~lGad~vi~~~~~~~~~~~v 53 (138)
+++|||++|.+.+++++|+ +|||+||+|++ .++|+|+++||++..++.+.+
T Consensus 122 ~~~TA~~~l~~~~~~~~g~-~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~~~~~~~~ 200 (325)
T TIGR02825 122 PGLTAYFGLLEICGVKGGE-TVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKKLGFDVAFNYKTVKSLEETL 200 (325)
T ss_pred HHHHHHHHHHHHhCCCCCC-EEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeccccccHHHHH
Confidence 5799999998899999999 99999999988 168999999998731466666
Q ss_pred hhhhccCCCCcc---cc-----------------eeeeeeeeeecCCCCCcch-hcHHHHHhcCeeeeeeeeccc-cchH
Q 039288 54 KRSVRFFPTCHQ---TA-----------------ALRFCEMTSQYNLDLPENV-HNLMFVVFGRSRMQGFIVFDY-SSVY 111 (138)
Q Consensus 54 ~~~~~~t~~gvd---d~-----------------~~~~~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~ 111 (138)
+. .+++|+| |. +++.+|............. .....+..+++++.++....+ ....
T Consensus 201 ~~---~~~~gvdvv~d~~G~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 277 (325)
T TIGR02825 201 KK---ASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVR 277 (325)
T ss_pred HH---hCCCCeEEEEECCCHHHHHHHHHHhCcCcEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhh
Confidence 66 5566788 31 5555554332111011111 122345567788887765333 2334
Q ss_pred HHHHHHHHHHHHhCCceece
Q 039288 112 PEFLEMILPYIREKARLSMR 131 (138)
Q Consensus 112 ~~~~~~~~~~~~~g~l~~~~ 131 (138)
.+.++++++++++|++++..
T Consensus 278 ~~~~~~~~~l~~~g~l~~~~ 297 (325)
T TIGR02825 278 QKALKELLKWVLEGKIQYKE 297 (325)
T ss_pred HHHHHHHHHHHHCCCcccce
Confidence 56788999999999998764
No 9
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=99.38 E-value=3.4e-12 Score=97.35 Aligned_cols=128 Identities=15% Similarity=0.142 Sum_probs=84.4
Q ss_pred chHhHHHHHHhhc------CCCCCCeEEEEecCCcce----------------------------eecCCceEeecCccc
Q 039288 2 PGLTAYANLFENF------SPKMGEEYVFISAAFSSV----------------------------YRSGFDDAFNYKEEL 47 (138)
Q Consensus 2 ~~~TA~~~L~~~~------~~~~g~~~VLI~gaaggv----------------------------~~lGad~vi~~~~~~ 47 (138)
+++|||.+|...+ ++++|+ +|||+||+||| .++|||+++||+++
T Consensus 135 ~~~tA~~al~~~~~~~~~~~~~~g~-~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~lGAd~vvdy~~~- 212 (347)
T KOG1198|consen 135 AALTALSALFQLAPGKRSKKLSKGK-SVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKKLGADEVVDYKDE- 212 (347)
T ss_pred HHHHHHHHHHhccccccccccCCCC-eEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHHcCCcEeecCCCH-
Confidence 6799999999999 999999 99999999999 28999999999999
Q ss_pred cHHHHHhhhhccCCCCcc---cc-----------------eeeeeeeeeecCCCCCcchhcHHHHHhc---Ceeeeeeee
Q 039288 48 DLNATLKRSVRFFPTCHQ---TA-----------------ALRFCEMTSQYNLDLPENVHNLMFVVFG---RSRMQGFIV 104 (138)
Q Consensus 48 ~~~~~v~~~~~~t~~gvd---d~-----------------~~~~~G~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 104 (138)
++.+.+++ .|++|+| |. +...++........... ...+..+... .....+...
T Consensus 213 ~~~e~~kk---~~~~~~DvVlD~vg~~~~~~~~~~l~~~g~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 288 (347)
T KOG1198|consen 213 NVVELIKK---YTGKGVDVVLDCVGGSTLTKSLSCLLKGGGGAYIGLVGDELANYKL-DDLWQSANGIKLYSLGLKGVNY 288 (347)
T ss_pred HHHHHHHh---hcCCCccEEEECCCCCccccchhhhccCCceEEEEecccccccccc-ccchhhhhhhhheeeeeeccce
Confidence 99999999 8877898 32 22223332222111000 0000001111 111111111
Q ss_pred c-cccchHHHHHHHHHHHHHhCCceeceeeee
Q 039288 105 F-DYSSVYPEFLEMILPYIREKARLSMRKAQL 135 (138)
Q Consensus 105 ~-~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~ 135 (138)
. .+....++.+..+.+++++|+|+|.+....
T Consensus 289 ~~~~~~~~~~~l~~l~~~ie~gkikp~i~~~~ 320 (347)
T KOG1198|consen 289 RWLYFVPSAEYLKALVELIEKGKIKPVIDSVY 320 (347)
T ss_pred eeeeecCCHHHHHHHHHHHHcCcccCCcceee
Confidence 0 113456788999999999999999886543
No 10
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=99.34 E-value=2.5e-11 Score=91.78 Aligned_cols=125 Identities=24% Similarity=0.378 Sum_probs=85.0
Q ss_pred chHhHHHHHHhhcCCCCC--CeEEEEecCCcce-----------------------------e-ecCCceEeecCccccH
Q 039288 2 PGLTAYANLFENFSPKMG--EEYVFISAAFSSV-----------------------------Y-RSGFDDAFNYKEELDL 49 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g--~~~VLI~gaaggv-----------------------------~-~lGad~vi~~~~~~~~ 49 (138)
+++|||++|.+.+++++| + +|||+||+|++ . ++|++++++++++ ++
T Consensus 136 ~~~ta~~al~~~~~~~~g~~~-~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~-~~ 213 (345)
T cd08293 136 PGLTALIGIQEKGHITPGANQ-TMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTD-NV 213 (345)
T ss_pred HHHHHHHHHHHhccCCCCCCC-EEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCC-CH
Confidence 678999999888899987 9 99999999988 0 2899999999988 89
Q ss_pred HHHHhhhhccCCCCcc---cc-----------------eeeeeeeeeecCCCCCc-chh--cHHHH-HhcCeeeeeeeec
Q 039288 50 NATLKRSVRFFPTCHQ---TA-----------------ALRFCEMTSQYNLDLPE-NVH--NLMFV-VFGRSRMQGFIVF 105 (138)
Q Consensus 50 ~~~v~~~~~~t~~gvd---d~-----------------~~~~~G~~~~~~~~~~~-~~~--~~~~~-~~~~~~~~~~~~~ 105 (138)
.+.+++ ++++|+| |. +++.+|.........+. .+. ....+ ..+++++.++...
T Consensus 214 ~~~i~~---~~~~gvd~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (345)
T cd08293 214 AERLRE---LCPEGVDVYFDNVGGEISDTVISQMNENSHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVL 290 (345)
T ss_pred HHHHHH---HCCCCceEEEECCCcHHHHHHHHHhccCCEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEee
Confidence 999998 7777888 31 56666654332111110 011 11112 2345555555433
Q ss_pred cccchHHHHHHHHHHHHHhCCceece
Q 039288 106 DYSSVYPEFLEMILPYIREKARLSMR 131 (138)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~g~l~~~~ 131 (138)
.+....++.++++++++++|++++..
T Consensus 291 ~~~~~~~~~~~~~~~l~~~g~i~~~~ 316 (345)
T cd08293 291 NYKDKFEEAIAQLSQWVKEGKLKVKE 316 (345)
T ss_pred ccHhHHHHHHHHHHHHHHCCCcccee
Confidence 33334566788899999999998753
No 11
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.28 E-value=7e-12 Score=105.43 Aligned_cols=114 Identities=16% Similarity=0.089 Sum_probs=87.5
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce-------------------------------e-ecCCceEeecCccccH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV-------------------------------Y-RSGFDDAFNYKEELDL 49 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv-------------------------------~-~lGad~vi~~~~~~~~ 49 (138)
.|.||||+|..++.+++|| ++|||+++||| | +|-..++-|+++. +|
T Consensus 1536 VYsTaYYALVvRG~mkkGe-kiLIHaGsGGVGQAAIaiALa~G~~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdt-sF 1613 (2376)
T KOG1202|consen 1536 VYSTAYYALVVRGQMKKGE-KILIHAGSGGVGQAAIAIALAHGCTVFTTVGSAEKREFLLKRFPQLQETNFANSRDT-SF 1613 (2376)
T ss_pred EeeeehhhhhhhccccCCc-EEEEecCCCchhHHHHHHHHHcCCEEEEecCcHHHHHHHHHhchhhhhhcccccccc-cH
Confidence 3789999999999999999 99999999999 1 6777888899998 99
Q ss_pred HHHHhhhhccC-CCCcc---c--------c---------eeeeeeeeeecCCCCCcchhcHHHHHhcCeeeeeeeecccc
Q 039288 50 NATLKRSVRFF-PTCHQ---T--------A---------ALRFCEMTSQYNLDLPENVHNLMFVVFGRSRMQGFIVFDYS 108 (138)
Q Consensus 50 ~~~v~~~~~~t-~~gvd---d--------~---------~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (138)
...+++ .| ++||| + + |+.++|.....+.+ |.+ +..+.+|++++|+.+-...
T Consensus 1614 Eq~vl~---~T~GrGVdlVLNSLaeEkLQASiRCLa~~GRFLEIGKfDLSqNs-pLG----MavfLkNvsfHGiLLDsvm 1685 (2376)
T KOG1202|consen 1614 EQHVLW---HTKGRGVDLVLNSLAEEKLQASIRCLALHGRFLEIGKFDLSQNS-PLG----MAVFLKNVSFHGILLDSVM 1685 (2376)
T ss_pred HHHHHH---HhcCCCeeeehhhhhHHHHHHHHHHHHhcCeeeeecceecccCC-cch----hhhhhcccceeeeehhhhh
Confidence 999998 88 68999 1 1 89999887654221 111 3467799999999876554
Q ss_pred chHHHHHHHHHHHHHhC
Q 039288 109 SVYPEFLEMILPYIREK 125 (138)
Q Consensus 109 ~~~~~~~~~~~~~~~~g 125 (138)
+.-.+.+.+++.++++|
T Consensus 1686 ege~e~~~ev~~Lv~eG 1702 (2376)
T KOG1202|consen 1686 EGEEEMWREVAALVAEG 1702 (2376)
T ss_pred cCcHHHHHHHHHHHHhh
Confidence 44445566666666664
No 12
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=99.22 E-value=3.3e-11 Score=88.66 Aligned_cols=136 Identities=18% Similarity=0.164 Sum_probs=88.9
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce--------------------------------eecCCceEeecCccc--
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV--------------------------------YRSGFDDAFNYKEEL-- 47 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv--------------------------------~~lGad~vi~~~~~~-- 47 (138)
+.+|||..|.+...+++|| +|+..||.++| +.+||++||...+.+
T Consensus 144 NP~TAyrmL~dfv~L~~GD-~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~ 222 (354)
T KOG0025|consen 144 NPCTAYRMLKDFVQLNKGD-SVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDR 222 (354)
T ss_pred CchHHHHHHHHHHhcCCCC-eeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcch
Confidence 5689999999999999999 99999999999 278999999643320
Q ss_pred cHHHHHhhh--hccCCCCcc--cc-----eeeeeeeeeecCCCC-CcchhcHHHHHhcCeeeeeeeecccc------chH
Q 039288 48 DLNATLKRS--VRFFPTCHQ--TA-----ALRFCEMTSQYNLDL-PENVHNLMFVVFGRSRMQGFIVFDYS------SVY 111 (138)
Q Consensus 48 ~~~~~v~~~--~~~t~~gvd--d~-----~~~~~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 111 (138)
+......+. .+++-++|. .+ .+-.-|.+..|+++. .+.+.+...++++.+++.|||+.+|. +..
T Consensus 223 ~~~k~~~~~~~prLalNcVGGksa~~iar~L~~GgtmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~ 302 (354)
T KOG0025|consen 223 KMKKFKGDNPRPRLALNCVGGKSATEIARYLERGGTMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEER 302 (354)
T ss_pred hhhhhhccCCCceEEEeccCchhHHHHHHHHhcCceEEEecCccCCCcccccchheeccceeeeeeeeehhhccCCcHHH
Confidence 111111110 001112333 11 233345555554331 22234445589999999999998773 345
Q ss_pred HHHHHHHHHHHHhCCceece--eeeeecC
Q 039288 112 PEFLEMILPYIREKARLSMR--KAQLKDF 138 (138)
Q Consensus 112 ~~~~~~~~~~~~~g~l~~~~--~~~~~~~ 138 (138)
.+..+++..|+.+|+|+.+. ..++.||
T Consensus 303 ~~~i~~~~~l~~~G~i~~~~~e~v~L~~~ 331 (354)
T KOG0025|consen 303 KEMIDELCDLYRRGKLKAPNCEKVPLADH 331 (354)
T ss_pred HHHHHHHHHHHHcCeeccccceeeechhh
Confidence 57789999999999998654 4566664
No 13
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=99.07 E-value=1.6e-09 Score=83.12 Aligned_cols=116 Identities=9% Similarity=-0.010 Sum_probs=83.6
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce-----------------------------eecCCceEeecCccccHHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV-----------------------------YRSGFDDAFNYKEELDLNAT 52 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv-----------------------------~~lGad~vi~~~~~~~~~~~ 52 (138)
+++|||+++.+.+++++|+ +|||+|+ |++ .++|++++++++++ ++.++
T Consensus 175 ~~~ta~~~~~~~~~i~~g~-~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~-~~~~~ 251 (371)
T cd08281 175 AVLTGVGAVVNTAGVRPGQ-SVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATATVNAGDP-NAVEQ 251 (371)
T ss_pred hHHHHHHHHHhccCCCCCC-EEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCceEeCCCch-hHHHH
Confidence 4689999988888999999 9999985 777 16799999999888 89999
Q ss_pred HhhhhccCCCCcc---cc------------------eeeeeeeeeecCCCCCcchhcHHHHHhcCeeeeeeeeccccchH
Q 039288 53 LKRSVRFFPTCHQ---TA------------------ALRFCEMTSQYNLDLPENVHNLMFVVFGRSRMQGFIVFDYSSVY 111 (138)
Q Consensus 53 v~~~~~~t~~gvd---d~------------------~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (138)
+++ .+++|+| |. +++.+|.... ......+...++.+++++.+.+...+. .
T Consensus 252 i~~---~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~----~~~~~~~~~~~~~~~~~i~g~~~~~~~--~ 322 (371)
T cd08281 252 VRE---LTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDP----EARLSVPALSLVAEERTLKGSYMGSCV--P 322 (371)
T ss_pred HHH---HhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCC----CceeeecHHHHhhcCCEEEEEecCCCC--h
Confidence 988 7755788 21 4444443211 011123445677799999987654432 2
Q ss_pred HHHHHHHHHHHHhCCcee
Q 039288 112 PEFLEMILPYIREKARLS 129 (138)
Q Consensus 112 ~~~~~~~~~~~~~g~l~~ 129 (138)
++.+.++++++++|++++
T Consensus 323 ~~~~~~~~~l~~~g~i~~ 340 (371)
T cd08281 323 RRDIPRYLALYLSGRLPV 340 (371)
T ss_pred HHHHHHHHHHHHcCCCCc
Confidence 345778899999999975
No 14
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=99.03 E-value=4e-09 Score=79.02 Aligned_cols=124 Identities=40% Similarity=0.522 Sum_probs=85.4
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce----------------------------ee-cCCceEeecCccccHHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV----------------------------YR-SGFDDAFNYKEELDLNAT 52 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv----------------------------~~-lGad~vi~~~~~~~~~~~ 52 (138)
+++|||+++.+.+++.+|+ +|||+|++|++ .+ +|+++++++++. ++.+.
T Consensus 129 ~~~ta~~~l~~~~~~~~~~-~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~ 206 (329)
T cd05288 129 TGLTAYFGLTEIGKPKPGE-TVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDAAINYKTP-DLAEA 206 (329)
T ss_pred HHHHHHHHHHhccCCCCCC-EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCceEEecCCh-hHHHH
Confidence 5789999998888999999 99999998888 02 889999999887 78888
Q ss_pred HhhhhccCCCCcc---cc-----------------eeeeeeeeeecCCCCCcchhcHHHHHhcCeeeeeeeeccccchHH
Q 039288 53 LKRSVRFFPTCHQ---TA-----------------ALRFCEMTSQYNLDLPENVHNLMFVVFGRSRMQGFIVFDYSSVYP 112 (138)
Q Consensus 53 v~~~~~~t~~gvd---d~-----------------~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (138)
+.+ .+++++| |. +++.+|..............+...++.+++++.++....+....+
T Consensus 207 v~~---~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (329)
T cd05288 207 LKE---AAPDGIDVYFDNVGGEILDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFP 283 (329)
T ss_pred HHH---hccCCceEEEEcchHHHHHHHHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhHHHHH
Confidence 887 6656777 21 455555433221100000122344566888888765543333345
Q ss_pred HHHHHHHHHHHhCCceec
Q 039288 113 EFLEMILPYIREKARLSM 130 (138)
Q Consensus 113 ~~~~~~~~~~~~g~l~~~ 130 (138)
+.+.++++++.+|.+++.
T Consensus 284 ~~~~~~~~~~~~g~i~~~ 301 (329)
T cd05288 284 EALAELAKWLAEGKLKYR 301 (329)
T ss_pred HHHHHHHHHHHCCCcccc
Confidence 678889999999988754
No 15
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=99.00 E-value=1.4e-09 Score=82.39 Aligned_cols=118 Identities=18% Similarity=0.174 Sum_probs=84.6
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce----------------------------eecCCceEeecCccccHHHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV----------------------------YRSGFDDAFNYKEELDLNATL 53 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv----------------------------~~lGad~vi~~~~~~~~~~~v 53 (138)
++.|+|.+|++ .+++||+ +|+|+|+. |+ .+||||+++|.+++ ++.+.+
T Consensus 151 aGiT~y~alk~-~~~~pG~-~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd~~i~~~~~-~~~~~~ 226 (339)
T COG1064 151 AGITTYRALKK-ANVKPGK-WVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVINSSDS-DALEAV 226 (339)
T ss_pred CeeeEeeehhh-cCCCCCC-EEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCCcEEEEcCCc-hhhHHh
Confidence 47899999986 8999999 99999985 77 28999999998876 788888
Q ss_pred hhhhccCC--C-Ccc-c-c--------eeeeeeeeeecCCCCCcchhcHHHHHhcCeeeeeeeeccccchHHHHHHHHHH
Q 039288 54 KRSVRFFP--T-CHQ-T-A--------ALRFCEMTSQYNLDLPENVHNLMFVVFGRSRMQGFIVFDYSSVYPEFLEMILP 120 (138)
Q Consensus 54 ~~~~~~t~--~-gvd-d-~--------~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (138)
++.+|..- - ..+ + . +++.+|.... .+.++.+...++.+++++.|..... +..++++++
T Consensus 227 ~~~~d~ii~tv~~~~~~~~l~~l~~~G~~v~vG~~~~----~~~~~~~~~~li~~~~~i~GS~~g~-----~~d~~e~l~ 297 (339)
T COG1064 227 KEIADAIIDTVGPATLEPSLKALRRGGTLVLVGLPGG----GPIPLLPAFLLILKEISIVGSLVGT-----RADLEEALD 297 (339)
T ss_pred HhhCcEEEECCChhhHHHHHHHHhcCCEEEEECCCCC----cccCCCCHHHhhhcCeEEEEEecCC-----HHHHHHHHH
Confidence 76222210 0 111 1 1 5666655420 1222345566788999999987653 457889999
Q ss_pred HHHhCCceecee
Q 039288 121 YIREKARLSMRK 132 (138)
Q Consensus 121 ~~~~g~l~~~~~ 132 (138)
+..+|+++|.+.
T Consensus 298 f~~~g~Ikp~i~ 309 (339)
T COG1064 298 FAAEGKIKPEIL 309 (339)
T ss_pred HHHhCCceeeEE
Confidence 999999999884
No 16
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=98.97 E-value=5.7e-09 Score=77.96 Aligned_cols=124 Identities=12% Similarity=0.027 Sum_probs=83.7
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce----------------------------eecCCceEeecCccccHHHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV----------------------------YRSGFDDAFNYKEELDLNATL 53 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv----------------------------~~lGad~vi~~~~~~~~~~~v 53 (138)
.++|||+++. .+++++|+ +|||+|++|++ .++|+++++++++. ++.+.+
T Consensus 124 ~~~ta~~~~~-~~~~~~g~-~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~i 200 (324)
T cd08292 124 MPLSALMLLD-FLGVKPGQ-WLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRALGIGPVVSTEQP-GWQDKV 200 (324)
T ss_pred cHHHHHHHHH-hhCCCCCC-EEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHhcCCCEEEcCCCc-hHHHHH
Confidence 4689999885 58999999 99999998877 14688999999887 899999
Q ss_pred hhhhccCC-CCcc---cc-----------eeeeeeeeeecCCC-CCcchhcHHHHHhcCeeeeeeeeccc-----cchHH
Q 039288 54 KRSVRFFP-TCHQ---TA-----------ALRFCEMTSQYNLD-LPENVHNLMFVVFGRSRMQGFIVFDY-----SSVYP 112 (138)
Q Consensus 54 ~~~~~~t~-~gvd---d~-----------~~~~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 112 (138)
++ .++ +|+| |. .+...|.+...+.. ....+.++...+.+++++.++....+ +....
T Consensus 201 ~~---~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (324)
T cd08292 201 RE---AAGGAPISVALDSVGGKLAGELLSLLGEGGTLVSFGSMSGEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRK 277 (324)
T ss_pred HH---HhCCCCCcEEEECCCChhHHHHHHhhcCCcEEEEEecCCCCCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHH
Confidence 88 774 6888 21 12223333222111 11112233445668899988765433 22345
Q ss_pred HHHHHHHHHHHhCCceece
Q 039288 113 EFLEMILPYIREKARLSMR 131 (138)
Q Consensus 113 ~~~~~~~~~~~~g~l~~~~ 131 (138)
+.+.++++++.+|++++..
T Consensus 278 ~~~~~~~~l~~~g~i~~~~ 296 (324)
T cd08292 278 RMIAELLTLALKGQLLLPV 296 (324)
T ss_pred HHHHHHHHHHHCCCccCcc
Confidence 6788899999999997543
No 17
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=98.97 E-value=7.5e-09 Score=79.01 Aligned_cols=120 Identities=12% Similarity=0.008 Sum_probs=81.4
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce-----------------------------eecCCceEeecCccccHHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV-----------------------------YRSGFDDAFNYKEELDLNAT 52 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv-----------------------------~~lGad~vi~~~~~~~~~~~ 52 (138)
++.|||+++.+.+++++|+ +|||+|+ |++ .++|+|+++|++++ ++.+.
T Consensus 160 ~~~ta~~~~~~~~~~~~g~-~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~~-~~~~~ 236 (358)
T TIGR03451 160 GVMAGLGAAVNTGGVKRGD-SVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSGT-DPVEA 236 (358)
T ss_pred cchhhHHHHHhccCCCCCC-EEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCCc-CHHHH
Confidence 4578898888888999999 9999975 787 16789999999888 89899
Q ss_pred HhhhhccCC-CCcc---cc------------eeeeeeeeeecCCCCC--cchhcHHHHHhcCeeeeeeeeccccchHHHH
Q 039288 53 LKRSVRFFP-TCHQ---TA------------ALRFCEMTSQYNLDLP--ENVHNLMFVVFGRSRMQGFIVFDYSSVYPEF 114 (138)
Q Consensus 53 v~~~~~~t~-~gvd---d~------------~~~~~G~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (138)
+++ .++ +|+| |. .+...|.+..++.... ....+...++.+++++.+.+.... ...+.
T Consensus 237 i~~---~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~ 311 (358)
T TIGR03451 237 IRA---LTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDC--LPERD 311 (358)
T ss_pred HHH---HhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCC--CcHHH
Confidence 988 774 5788 22 1222333332221111 112334456778888887654322 12456
Q ss_pred HHHHHHHHHhCCcee
Q 039288 115 LEMILPYIREKARLS 129 (138)
Q Consensus 115 ~~~~~~~~~~g~l~~ 129 (138)
++++++++++|++++
T Consensus 312 ~~~~~~l~~~g~l~~ 326 (358)
T TIGR03451 312 FPMLVDLYLQGRLPL 326 (358)
T ss_pred HHHHHHHHHcCCCCc
Confidence 788999999999975
No 18
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=98.92 E-value=1.3e-08 Score=77.21 Aligned_cols=110 Identities=14% Similarity=0.115 Sum_probs=80.2
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce-----------------------------eecCCceEeecCccccHHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV-----------------------------YRSGFDDAFNYKEELDLNAT 52 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv-----------------------------~~lGad~vi~~~~~~~~~~~ 52 (138)
++.|||+++ ..+++++|+ +|||+|+ |++ .++|+++++|+++. ++.+.
T Consensus 157 ~~~ta~~~l-~~~~~~~g~-~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~-~~~~~ 232 (351)
T cd08233 157 PLAVAWHAV-RRSGFKPGD-TALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDPTEV-DVVAE 232 (351)
T ss_pred HHHHHHHHH-HhcCCCCCC-EEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCcc-CHHHH
Confidence 567999998 678999999 9999985 777 15689999999988 89999
Q ss_pred HhhhhccCC-CCcc---cc------------------eeeeeeeeeecCCCCCcchhcHHHHHhcCeeeeeeeeccccch
Q 039288 53 LKRSVRFFP-TCHQ---TA------------------ALRFCEMTSQYNLDLPENVHNLMFVVFGRSRMQGFIVFDYSSV 110 (138)
Q Consensus 53 v~~~~~~t~-~gvd---d~------------------~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (138)
+++ .++ +|+| |. +++.+|... ...+.++..++.+++++.+++...
T Consensus 233 l~~---~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~------~~~~~~~~~~~~~~~~i~g~~~~~---- 299 (351)
T cd08233 233 VRK---LTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWE------KPISFNPNDLVLKEKTLTGSICYT---- 299 (351)
T ss_pred HHH---HhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCC------CCCccCHHHHHhhCcEEEEEeccC----
Confidence 988 664 5788 21 444444322 112344556677889998875432
Q ss_pred HHHHHHHHHHHHHhCCcee
Q 039288 111 YPEFLEMILPYIREKARLS 129 (138)
Q Consensus 111 ~~~~~~~~~~~~~~g~l~~ 129 (138)
++.++++++++++|++++
T Consensus 300 -~~~~~~~~~~~~~g~l~~ 317 (351)
T cd08233 300 -REDFEEVIDLLASGKIDA 317 (351)
T ss_pred -cchHHHHHHHHHcCCCCh
Confidence 346788999999999964
No 19
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=98.86 E-value=3.2e-08 Score=73.83 Aligned_cols=124 Identities=21% Similarity=0.212 Sum_probs=83.7
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce----------------------------eecCCceEeecCccccHHHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV----------------------------YRSGFDDAFNYKEELDLNATL 53 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv----------------------------~~lGad~vi~~~~~~~~~~~v 53 (138)
+++|||+++...+++++|+ +|||+|++|++ .++|++++++++.. ++.+++
T Consensus 122 ~~~ta~~~~~~~~~~~~~~-~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~ 199 (323)
T cd05282 122 NPLTAWLMLTEYLKLPPGD-WVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEELKALGADEVIDSSPE-DLAQRV 199 (323)
T ss_pred cHHHHHHHHHHhccCCCCC-EEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHHHhcCCCEEecccch-hHHHHH
Confidence 5789999999888999999 99999998877 14688999999877 788888
Q ss_pred hhhhccC-CCCcc---cc-----------eeeeeeeeeecCCCCC-cchhcHHHHHhcCeeeeeeeeccc-----cchHH
Q 039288 54 KRSVRFF-PTCHQ---TA-----------ALRFCEMTSQYNLDLP-ENVHNLMFVVFGRSRMQGFIVFDY-----SSVYP 112 (138)
Q Consensus 54 ~~~~~~t-~~gvd---d~-----------~~~~~G~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 112 (138)
.+ .+ ++|+| |. .+...|.+...+.... ....++..+..+++++.++....+ +...+
T Consensus 200 ~~---~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (323)
T cd05282 200 KE---ATGGAGARLALDAVGGESATRLARSLRPGGTLVNYGLLSGEPVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQ 276 (323)
T ss_pred HH---HhcCCCceEEEECCCCHHHHHHHHhhCCCCEEEEEccCCCCCCCCCHHHHhhcCceEEEEEehHhhccCCHHHHH
Confidence 88 66 46888 21 1222333322211100 112233333447888888765443 23455
Q ss_pred HHHHHHHHHHHhCCceec
Q 039288 113 EFLEMILPYIREKARLSM 130 (138)
Q Consensus 113 ~~~~~~~~~~~~g~l~~~ 130 (138)
+.++++++++.+|++.+.
T Consensus 277 ~~~~~~~~~l~~~~l~~~ 294 (323)
T cd05282 277 ETFAEVIKLVEAGVLTTP 294 (323)
T ss_pred HHHHHHHHHHhCCCcccC
Confidence 678889999999998764
No 20
>PLN02827 Alcohol dehydrogenase-like
Probab=98.84 E-value=4.5e-08 Score=75.50 Aligned_cols=119 Identities=12% Similarity=0.071 Sum_probs=79.3
Q ss_pred hHhHHHHHHhhcCCCCCCeEEEEecCCcce-----------------------------eecCCceEeecCc--cccHHH
Q 039288 3 GLTAYANLFENFSPKMGEEYVFISAAFSSV-----------------------------YRSGFDDAFNYKE--ELDLNA 51 (138)
Q Consensus 3 ~~TA~~~L~~~~~~~~g~~~VLI~gaaggv-----------------------------~~lGad~vi~~~~--~~~~~~ 51 (138)
..|||+++.+.+++++|+ +|||+|+ |++ .++|++++||+++ + ++.+
T Consensus 178 ~~~a~~~~~~~~~~~~g~-~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~~i~~~~~~~-~~~~ 254 (378)
T PLN02827 178 VAAGLGAAWNVADVSKGS-SVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFINPNDLSE-PIQQ 254 (378)
T ss_pred hHhhHHHHHhhcCCCCCC-EEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEcccccch-HHHH
Confidence 467888777778999999 9999985 788 1679999999875 4 6778
Q ss_pred HHhhhhccCCCCcc---cc------------eeeee-eeeeecCCCCCcchhcH-HHHHhcCeeeeeeeeccccchHHHH
Q 039288 52 TLKRSVRFFPTCHQ---TA------------ALRFC-EMTSQYNLDLPENVHNL-MFVVFGRSRMQGFIVFDYSSVYPEF 114 (138)
Q Consensus 52 ~v~~~~~~t~~gvd---d~------------~~~~~-G~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (138)
.+++ ++++|+| |. .+..- |.+..++........+. ..++.+++++.+.....+. .+..
T Consensus 255 ~v~~---~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~--~~~~ 329 (378)
T PLN02827 255 VIKR---MTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGRTLKGSLFGGWK--PKSD 329 (378)
T ss_pred HHHH---HhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHhcCceEEeeecCCCc--hhhh
Confidence 8888 7755788 21 22233 44444332111111122 3466788999887654331 2345
Q ss_pred HHHHHHHHHhCCcee
Q 039288 115 LEMILPYIREKARLS 129 (138)
Q Consensus 115 ~~~~~~~~~~g~l~~ 129 (138)
++++++++++|+|++
T Consensus 330 ~~~~~~~~~~g~i~~ 344 (378)
T PLN02827 330 LPSLVDKYMNKEIMI 344 (378)
T ss_pred HHHHHHHHHcCCCCh
Confidence 678889999999987
No 21
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=98.83 E-value=4.4e-08 Score=73.60 Aligned_cols=120 Identities=18% Similarity=0.218 Sum_probs=80.7
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEe-cCCcce----------------------------eecCCceEeecCccccHHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFIS-AAFSSV----------------------------YRSGFDDAFNYKEELDLNAT 52 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~-gaaggv----------------------------~~lGad~vi~~~~~~~~~~~ 52 (138)
.++|||..+ +.+++ +|+ +++|+ +|+|++ .++|++++++++++ ++.++
T Consensus 128 ~~~ta~~~~-~~~~~-~~~-~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~-~~~~~ 203 (324)
T cd08291 128 NPLTALGML-ETARE-EGA-KAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKKIGAEYVLNSSDP-DFLED 203 (324)
T ss_pred cHHHHHHHH-Hhhcc-CCC-cEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEECCCc-cHHHH
Confidence 578897654 55565 566 67777 788888 16899999999988 89999
Q ss_pred HhhhhccCC-CCcc---cc-----------------eeeeeeeeeecCCCCCcchhcHHHHHhcCeeeeeeeecccc-ch
Q 039288 53 LKRSVRFFP-TCHQ---TA-----------------ALRFCEMTSQYNLDLPENVHNLMFVVFGRSRMQGFIVFDYS-SV 110 (138)
Q Consensus 53 v~~~~~~t~-~gvd---d~-----------------~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 110 (138)
+++ .++ +|+| |. +++.+|...... ....+...++.+++++.+++...+. ..
T Consensus 204 v~~---~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (324)
T cd08291 204 LKE---LIAKLNATIFFDAVGGGLTGQILLAMPYGSTLYVYGYLSGKL----DEPIDPVDLIFKNKSIEGFWLTTWLQKL 276 (324)
T ss_pred HHH---HhCCCCCcEEEECCCcHHHHHHHHhhCCCCEEEEEEecCCCC----cccCCHHHHhhcCcEEEEEEHHHhhccc
Confidence 998 774 6888 31 455555432211 1113344567789999887765442 22
Q ss_pred HHHHHHHHHHHHHhCCceeceee
Q 039288 111 YPEFLEMILPYIREKARLSMRKA 133 (138)
Q Consensus 111 ~~~~~~~~~~~~~~g~l~~~~~~ 133 (138)
.++.+.+++++++ |++++.+..
T Consensus 277 ~~~~~~~~~~~~~-~~~~~~i~~ 298 (324)
T cd08291 277 GPEVVKKLKKLVK-TELKTTFAS 298 (324)
T ss_pred CHHHHHHHHHHHh-Cccccceee
Confidence 3567888899988 889876653
No 22
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=98.83 E-value=5.1e-08 Score=73.67 Aligned_cols=114 Identities=14% Similarity=0.030 Sum_probs=75.3
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce-----------------------------eecCCceEeecCccccHHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV-----------------------------YRSGFDDAFNYKEELDLNAT 52 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv-----------------------------~~lGad~vi~~~~~~~~~~~ 52 (138)
++.|||+++. .+++++|+ +|||+|+ |++ .++|+++++|++++ + .++
T Consensus 148 ~~~ta~~~l~-~~~~~~g~-~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~~-~-~~~ 222 (339)
T cd08239 148 GIGTAYHALR-RVGVSGRD-TVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQD-D-VQE 222 (339)
T ss_pred hHHHHHHHHH-hcCCCCCC-EEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCcc-h-HHH
Confidence 5689999985 57899999 9999975 777 16789999999887 7 777
Q ss_pred HhhhhccCC-CCcc---cc------------eeeeeeeeeecCCCCCcchhc-HHHHHhcCeeeeeeeeccccchHHHHH
Q 039288 53 LKRSVRFFP-TCHQ---TA------------ALRFCEMTSQYNLDLPENVHN-LMFVVFGRSRMQGFIVFDYSSVYPEFL 115 (138)
Q Consensus 53 v~~~~~~t~-~gvd---d~------------~~~~~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (138)
+++ .++ +|+| |. .+...|.+..++..... +.+ ...++.+++++.+.+... .+.+
T Consensus 223 ~~~---~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~-----~~~~ 293 (339)
T cd08239 223 IRE---LTSGAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGEL-TIEVSNDLIRKQRTLIGSWYFS-----VPDM 293 (339)
T ss_pred HHH---HhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCc-ccCcHHHHHhCCCEEEEEecCC-----HHHH
Confidence 777 664 5788 21 12222333222111111 111 234566888888865432 3467
Q ss_pred HHHHHHHHhCCcee
Q 039288 116 EMILPYIREKARLS 129 (138)
Q Consensus 116 ~~~~~~~~~g~l~~ 129 (138)
+++++++++|++++
T Consensus 294 ~~~~~~~~~g~i~~ 307 (339)
T cd08239 294 EECAEFLARHKLEV 307 (339)
T ss_pred HHHHHHHHcCCCCh
Confidence 88899999999875
No 23
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=98.78 E-value=9.3e-08 Score=71.68 Aligned_cols=123 Identities=26% Similarity=0.333 Sum_probs=82.5
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce----------------------------eecCCceEeecCccccHHHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV----------------------------YRSGFDDAFNYKEELDLNATL 53 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv----------------------------~~lGad~vi~~~~~~~~~~~v 53 (138)
+++|||+++.+.+++++|+ +|||+||+|++ .++|++++++++.. ++.+.+
T Consensus 123 ~~~ta~~~l~~~~~~~~~~-~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~~~ 200 (329)
T cd08250 123 SGLTASIALEEVGEMKSGE-TVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKSLGCDRPINYKTE-DLGEVL 200 (329)
T ss_pred HHHHHHHHHHHhcCCCCCC-EEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHHcCCceEEeCCCc-cHHHHH
Confidence 5789999998888999999 99999998888 14678888888776 777777
Q ss_pred hhhhccCCCCcc---cc-----------------eeeeeeeeeecCCC--C---CcchhcHHHHHhcCeeeeeeeecccc
Q 039288 54 KRSVRFFPTCHQ---TA-----------------ALRFCEMTSQYNLD--L---PENVHNLMFVVFGRSRMQGFIVFDYS 108 (138)
Q Consensus 54 ~~~~~~t~~gvd---d~-----------------~~~~~G~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (138)
.+ ..++|+| |. +++.+|........ . .....+ ...+.+++++.++....+.
T Consensus 201 ~~---~~~~~vd~v~~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 276 (329)
T cd08250 201 KK---EYPKGVDVVYESVGGEMFDTCVDNLALKGRLIVIGFISGYQSGTGPSPVKGATLP-PKLLAKSASVRGFFLPHYA 276 (329)
T ss_pred HH---hcCCCCeEEEECCcHHHHHHHHHHhccCCeEEEEecccCCcccCccccccccccc-HHHhhcCceEEEEEhHHHH
Confidence 76 5456777 21 45555543321000 0 000111 2345678888877654333
Q ss_pred chHHHHHHHHHHHHHhCCceec
Q 039288 109 SVYPEFLEMILPYIREKARLSM 130 (138)
Q Consensus 109 ~~~~~~~~~~~~~~~~g~l~~~ 130 (138)
...++.+.++++++++|.+++.
T Consensus 277 ~~~~~~~~~~~~~~~~~~l~~~ 298 (329)
T cd08250 277 KLIPQHLDRLLQLYQRGKLVCE 298 (329)
T ss_pred HHHHHHHHHHHHHHHCCCeeee
Confidence 3356778889999999988763
No 24
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=98.73 E-value=1.3e-07 Score=71.95 Aligned_cols=117 Identities=16% Similarity=0.108 Sum_probs=74.3
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce----------------------------eecCCceEeecCcc--ccHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV----------------------------YRSGFDDAFNYKEE--LDLNA 51 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv----------------------------~~lGad~vi~~~~~--~~~~~ 51 (138)
++.|||+++. ..++++|+ +|||+|+ |++ .++|++++||+++. .++.+
T Consensus 151 ~~~ta~~a~~-~~~~~~g~-~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~ 227 (349)
T TIGR03201 151 AVTTPYQAAV-QAGLKKGD-LVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKK 227 (349)
T ss_pred hHHHHHHHHH-hcCCCCCC-EEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHH
Confidence 4679999986 47899999 9999998 888 16799999998663 04677
Q ss_pred HHhhhhccCC-CCcc-------cc------------eeeeeeeeeecCCCCCcchhcHHHHHhcCeeeeeeeeccccchH
Q 039288 52 TLKRSVRFFP-TCHQ-------TA------------ALRFCEMTSQYNLDLPENVHNLMFVVFGRSRMQGFIVFDYSSVY 111 (138)
Q Consensus 52 ~v~~~~~~t~-~gvd-------d~------------~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (138)
++++ +|+ +|+| |. .+...|.+..++......+.++..++.+++++.+.+.. .
T Consensus 228 ~~~~---~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~g~~~~-----~ 299 (349)
T TIGR03201 228 LIKA---FAKARGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAKTEYRLSNLMAFHARALGNWGC-----P 299 (349)
T ss_pred HHHh---hcccCCCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCCcccCHHHHhhcccEEEEEecC-----C
Confidence 7777 663 5664 11 12222332222211111123444556667777765432 2
Q ss_pred HHHHHHHHHHHHhCCcee
Q 039288 112 PEFLEMILPYIREKARLS 129 (138)
Q Consensus 112 ~~~~~~~~~~~~~g~l~~ 129 (138)
+..+.++++++++|++++
T Consensus 300 ~~~~~~~~~~i~~g~i~~ 317 (349)
T TIGR03201 300 PDRYPAALDLVLDGKIQL 317 (349)
T ss_pred HHHHHHHHHHHHcCCCCc
Confidence 345778899999999865
No 25
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=98.72 E-value=2e-07 Score=70.32 Aligned_cols=118 Identities=19% Similarity=0.117 Sum_probs=80.1
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce----------------------------eecCCceEeecCccccHHHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV----------------------------YRSGFDDAFNYKEELDLNATL 53 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv----------------------------~~lGad~vi~~~~~~~~~~~v 53 (138)
+++|||+++.. .++++|+ +|||+|+++++ .++|+++++++++. ++.+.+
T Consensus 150 ~~~ta~~~~~~-~~~~~~~-~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~~~ 226 (341)
T cd08297 150 AGVTVYKALKK-AGLKPGD-WVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAKELGADAFVDFKKS-DDVEAV 226 (341)
T ss_pred chHHHHHHHHh-cCCCCCC-EEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCcEEEcCCCc-cHHHHH
Confidence 57899999876 4899999 99999998867 15788999999887 888888
Q ss_pred hhhhccC-CCCcc---cc------------eeeeeeeeeecCCC-CCcchhcHHHHHhcCeeeeeeeeccccchHHHHHH
Q 039288 54 KRSVRFF-PTCHQ---TA------------ALRFCEMTSQYNLD-LPENVHNLMFVVFGRSRMQGFIVFDYSSVYPEFLE 116 (138)
Q Consensus 54 ~~~~~~t-~~gvd---d~------------~~~~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (138)
.+ .+ ++|+| +. .+...|.+...+.. ....+.+...++.+++++.+.... ..+.++
T Consensus 227 ~~---~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 298 (341)
T cd08297 227 KE---LTGGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLVG-----TRQDLQ 298 (341)
T ss_pred HH---HhcCCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCCCCCCCHHHHHhcccEEEEeccC-----CHHHHH
Confidence 88 66 46788 31 22233444333211 111123334455788887764332 245778
Q ss_pred HHHHHHHhCCceec
Q 039288 117 MILPYIREKARLSM 130 (138)
Q Consensus 117 ~~~~~~~~g~l~~~ 130 (138)
+++++++++++++.
T Consensus 299 ~~~~~~~~~~l~~~ 312 (341)
T cd08297 299 EALEFAARGKVKPH 312 (341)
T ss_pred HHHHHHHcCCCcce
Confidence 88999999988753
No 26
>PLN02740 Alcohol dehydrogenase-like
Probab=98.71 E-value=1.2e-07 Score=73.02 Aligned_cols=120 Identities=13% Similarity=0.069 Sum_probs=76.7
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce-----------------------------eecCCceEeecCcc-ccHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV-----------------------------YRSGFDDAFNYKEE-LDLNA 51 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv-----------------------------~~lGad~vi~~~~~-~~~~~ 51 (138)
++.|||+++.+.+++++|+ +|||+|+ |++ .++|+++++|+++. .++.+
T Consensus 182 ~~~ta~~~~~~~~~~~~g~-~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~~ 259 (381)
T PLN02740 182 GVSTGVGAAWNTANVQAGS-SVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGITDFINPKDSDKPVHE 259 (381)
T ss_pred cchhhHHHHHhccCCCCCC-EEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCCcEEEecccccchHHH
Confidence 4679999888889999999 9999985 888 15789999998763 04888
Q ss_pred HHhhhhccCCCCcc---cc------------eeeee-eeeeecCCCC-C-cchhcHHHHHhcCeeeeeeeeccccchHHH
Q 039288 52 TLKRSVRFFPTCHQ---TA------------ALRFC-EMTSQYNLDL-P-ENVHNLMFVVFGRSRMQGFIVFDYSSVYPE 113 (138)
Q Consensus 52 ~v~~~~~~t~~gvd---d~------------~~~~~-G~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (138)
.+++ ++++|+| |. .+..- |.+..++... + ..+.+...+ .+++++.+.....+. ...
T Consensus 260 ~v~~---~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~--~~~ 333 (381)
T PLN02740 260 RIRE---MTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMEL-FDGRSITGSVFGDFK--GKS 333 (381)
T ss_pred HHHH---HhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHH-hcCCeEEEEecCCCC--cHH
Confidence 8888 7655788 22 11121 3333322111 1 111222222 367888876554432 124
Q ss_pred HHHHHHHHHHhCCcee
Q 039288 114 FLEMILPYIREKARLS 129 (138)
Q Consensus 114 ~~~~~~~~~~~g~l~~ 129 (138)
.+.++++++.+|++++
T Consensus 334 ~~~~~~~~~~~g~i~~ 349 (381)
T PLN02740 334 QLPNLAKQCMQGVVNL 349 (381)
T ss_pred HHHHHHHHHHcCCCCh
Confidence 5678899999998865
No 27
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=98.71 E-value=2e-07 Score=69.75 Aligned_cols=120 Identities=19% Similarity=0.172 Sum_probs=80.0
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce----------------------------eecCCceEeecCcccc-HHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV----------------------------YRSGFDDAFNYKEELD-LNAT 52 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv----------------------------~~lGad~vi~~~~~~~-~~~~ 52 (138)
++.|||+++.+.+++++|+ +|||+|++|++ .++|++++++++.. + +.+.
T Consensus 124 ~~~ta~~~l~~~~~~~~~~-~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~ 201 (334)
T PTZ00354 124 AFLTAWQLLKKHGDVKKGQ-SVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFCKKLAAIILIRYPDE-EGFAPK 201 (334)
T ss_pred HHHHHHHHHHHhcCCCCCC-EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCCh-hHHHHH
Confidence 4689999998889999999 99999998888 04688889988765 5 7888
Q ss_pred HhhhhccCC-CCcc---cc-----------------eeeeeeeeeecCCCCCcchhcHHHHHhcCeeeeeeeecccc---
Q 039288 53 LKRSVRFFP-TCHQ---TA-----------------ALRFCEMTSQYNLDLPENVHNLMFVVFGRSRMQGFIVFDYS--- 108 (138)
Q Consensus 53 v~~~~~~t~-~gvd---d~-----------------~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 108 (138)
+++ .++ +|+| +. +++.+|.... ......++..++.++.++.+.......
T Consensus 202 ~~~---~~~~~~~d~~i~~~~~~~~~~~~~~l~~~g~~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (334)
T PTZ00354 202 VKK---LTGEKGVNLVLDCVGGSYLSETAEVLAVDGKWIVYGFMGG----AKVEKFNLLPLLRKRASIIFSTLRSRSDEY 274 (334)
T ss_pred HHH---HhCCCCceEEEECCchHHHHHHHHHhccCCeEEEEecCCC----CcccccCHHHHHhhCCEEEeeeccccchhh
Confidence 888 664 6787 21 4444442211 011113444455666677775543311
Q ss_pred --chHHHHHHHHHHHHHhCCceec
Q 039288 109 --SVYPEFLEMILPYIREKARLSM 130 (138)
Q Consensus 109 --~~~~~~~~~~~~~~~~g~l~~~ 130 (138)
....+.+++++++++++.+.+.
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~l~~~ 298 (334)
T PTZ00354 275 KADLVASFEREVLPYMEEGEIKPI 298 (334)
T ss_pred hHHHHHHHHHHHHHHHHCCCccCc
Confidence 1233566788889999988754
No 28
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=98.70 E-value=1.3e-07 Score=71.75 Aligned_cols=113 Identities=16% Similarity=0.178 Sum_probs=72.1
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce-----------------------------eecCCceEeecCccccHHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV-----------------------------YRSGFDDAFNYKEELDLNAT 52 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv-----------------------------~~lGad~vi~~~~~~~~~~~ 52 (138)
+..|||+++.+ ....+|+ +|||+|+ |++ .++|+++++|++++ ++.+
T Consensus 154 ~~~~a~~al~~-~~~~~g~-~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~-~~~~- 228 (343)
T PRK09880 154 PLAVAIHAAHQ-AGDLQGK-RVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQND-DLDH- 228 (343)
T ss_pred HHHHHHHHHHh-cCCCCCC-EEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCcc-cHHH-
Confidence 56789999865 4566899 9999986 888 17899999999887 6643
Q ss_pred HhhhhccCCCCcc---cc------------eeeeeeeeeecCCCCCcchhcHHHHHhcCeeeeeeeeccccchHHHHHHH
Q 039288 53 LKRSVRFFPTCHQ---TA------------ALRFCEMTSQYNLDLPENVHNLMFVVFGRSRMQGFIVFDYSSVYPEFLEM 117 (138)
Q Consensus 53 v~~~~~~t~~gvd---d~------------~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (138)
+.+ .. +++| |. .+...|.+..++......+.++..++.+++++.+.... .+.+++
T Consensus 229 ~~~---~~-g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~------~~~~~~ 298 (343)
T PRK09880 229 YKA---EK-GYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGAPPEFPMMTLIVKEISLKGSFRF------TEEFNT 298 (343)
T ss_pred Hhc---cC-CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHHhCCcEEEEEeec------cccHHH
Confidence 222 21 2466 21 12222333322211111234455667788888876432 235778
Q ss_pred HHHHHHhCCcee
Q 039288 118 ILPYIREKARLS 129 (138)
Q Consensus 118 ~~~~~~~g~l~~ 129 (138)
+++++++|++++
T Consensus 299 ~~~l~~~g~i~~ 310 (343)
T PRK09880 299 AVSWLANGVINP 310 (343)
T ss_pred HHHHHHcCCCCc
Confidence 899999999976
No 29
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=98.68 E-value=2e-07 Score=71.39 Aligned_cols=120 Identities=18% Similarity=0.139 Sum_probs=80.2
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce-----------------------------eecCCceEeecCccccHHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV-----------------------------YRSGFDDAFNYKEELDLNAT 52 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv-----------------------------~~lGad~vi~~~~~~~~~~~ 52 (138)
+++|||+++.+.+.+++|+ +|||+| +|++ .++|++++++++++ ++.+.
T Consensus 170 ~~~ta~~~~~~~~~~~~g~-~vlI~g-~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i~~~~~-~~~~~ 246 (365)
T cd08278 170 GIQTGAGAVLNVLKPRPGS-SIAVFG-AGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVINPKEE-DLVAA 246 (365)
T ss_pred hhhhhhHHHhhhcCCCCCC-EEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEecCCCc-CHHHH
Confidence 5789999998889999999 999996 4777 15688899999887 78888
Q ss_pred HhhhhccCCCCcc---cc------------eeeeeeeeeecCCC--CCcchhcHHHHHhcCeeeeeeeeccccchHHHHH
Q 039288 53 LKRSVRFFPTCHQ---TA------------ALRFCEMTSQYNLD--LPENVHNLMFVVFGRSRMQGFIVFDYSSVYPEFL 115 (138)
Q Consensus 53 v~~~~~~t~~gvd---d~------------~~~~~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (138)
+++ .+++|+| |. .+...|.+..++.. .+....++..++.+++++.++..... ..++.+
T Consensus 247 v~~---~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 321 (365)
T cd08278 247 IRE---ITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEGDS--VPQEFI 321 (365)
T ss_pred HHH---HhCCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHHhhcCceEEEeecCCc--ChHHHH
Confidence 888 6655777 21 12233333332211 11123344445578888887654321 224667
Q ss_pred HHHHHHHHhCCcee
Q 039288 116 EMILPYIREKARLS 129 (138)
Q Consensus 116 ~~~~~~~~~g~l~~ 129 (138)
+++++++++|++++
T Consensus 322 ~~~~~~l~~g~l~~ 335 (365)
T cd08278 322 PRLIELYRQGKFPF 335 (365)
T ss_pred HHHHHHHHcCCCCh
Confidence 88899999998854
No 30
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=98.68 E-value=3e-07 Score=70.48 Aligned_cols=120 Identities=12% Similarity=0.017 Sum_probs=74.8
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce-----------------------------eecCCceEeecCccc-cHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV-----------------------------YRSGFDDAFNYKEEL-DLNA 51 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv-----------------------------~~lGad~vi~~~~~~-~~~~ 51 (138)
++.|||+++.+.+++++|+ +|||+|+ |++ .++|++++||+++.. ++.+
T Consensus 170 ~~~ta~~a~~~~~~~~~g~-~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~ 247 (368)
T cd08300 170 GVTTGYGAVLNTAKVEPGS-TVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKDHDKPIQQ 247 (368)
T ss_pred chhhhHHHHHHhcCCCCCC-EEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEcccccchHHHH
Confidence 4689999988888999999 9999975 777 167999999987630 4888
Q ss_pred HHhhhhccCCCCcc---cc------------eeee-eeeeeecCCC--CCcchhcHHHHHhcCeeeeeeeeccccchHHH
Q 039288 52 TLKRSVRFFPTCHQ---TA------------ALRF-CEMTSQYNLD--LPENVHNLMFVVFGRSRMQGFIVFDYSSVYPE 113 (138)
Q Consensus 52 ~v~~~~~~t~~gvd---d~------------~~~~-~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (138)
.+++ ++++|+| |. .+.. .|.+..++.. ....+.+...+. ++.++.++....+. .++
T Consensus 248 ~v~~---~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~--~~~ 321 (368)
T cd08300 248 VLVE---MTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLV-TGRVWKGTAFGGWK--SRS 321 (368)
T ss_pred HHHH---HhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHh-hcCeEEEEEecccC--cHH
Confidence 8888 7755788 31 1112 1343333211 111111222222 33455555443331 245
Q ss_pred HHHHHHHHHHhCCcee
Q 039288 114 FLEMILPYIREKARLS 129 (138)
Q Consensus 114 ~~~~~~~~~~~g~l~~ 129 (138)
.+.++++++++|++++
T Consensus 322 ~~~~~~~~~~~g~l~~ 337 (368)
T cd08300 322 QVPKLVEDYMKGKIKV 337 (368)
T ss_pred HHHHHHHHHHcCCCCh
Confidence 6778899999999975
No 31
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=98.66 E-value=3.3e-07 Score=70.78 Aligned_cols=115 Identities=17% Similarity=0.147 Sum_probs=75.3
Q ss_pred chHhHHHHHHhh--cCCCCCCeEEEEecCCcce----------------------------eecCCceEeecCcc-----
Q 039288 2 PGLTAYANLFEN--FSPKMGEEYVFISAAFSSV----------------------------YRSGFDDAFNYKEE----- 46 (138)
Q Consensus 2 ~~~TA~~~L~~~--~~~~~g~~~VLI~gaaggv----------------------------~~lGad~vi~~~~~----- 46 (138)
+++|||+++... +++++|+ +|||+|++|++ .++|+++++|+++.
T Consensus 175 ~~~tA~~al~~~~~~~~~~g~-~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~~~G~~~~i~~~~~~~~~~ 253 (393)
T cd08246 175 VGATAYRMLFGWNPNTVKPGD-NVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCRALGAEGVINRRDFDHWGV 253 (393)
T ss_pred cHHHHHHHHhhcccccCCCCC-EEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCCEEEcccccccccc
Confidence 678999998765 7899999 99999998888 16799999987432
Q ss_pred ----------------ccHHHHHhhhhccCC-C-Ccc---cc-----------------eeeeeeeeeecCCCCCcchhc
Q 039288 47 ----------------LDLNATLKRSVRFFP-T-CHQ---TA-----------------ALRFCEMTSQYNLDLPENVHN 88 (138)
Q Consensus 47 ----------------~~~~~~v~~~~~~t~-~-gvd---d~-----------------~~~~~G~~~~~~~~~~~~~~~ 88 (138)
..+.+.+.+ +++ . |+| |. +++.+|..... ..+.+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~v~~---l~~~~~g~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~ 325 (393)
T cd08246 254 LPDVNSEAYTAWTKEARRFGKAIWD---ILGGREDPDIVFEHPGRATFPTSVFVCDRGGMVVICAGTTGY-----NHTYD 325 (393)
T ss_pred cccccchhhhhhhhccchHHHHHHH---HhCCCCCCeEEEECCchHhHHHHHHHhccCCEEEEEcccCCC-----CCCCc
Confidence 025667777 674 4 788 21 34444432111 11233
Q ss_pred HHHHHhcCeeeeeeeeccccchHHHHHHHHHHHHHhCCceec
Q 039288 89 LMFVVFGRSRMQGFIVFDYSSVYPEFLEMILPYIREKARLSM 130 (138)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~ 130 (138)
+..++.++.++.+.... ..+.+.+++++++++++.+.
T Consensus 326 ~~~l~~~~~~i~g~~~~-----~~~~~~~~~~~~~~~~l~~~ 362 (393)
T cd08246 326 NRYLWMRQKRIQGSHFA-----NDREAAEANRLVMKGRIDPC 362 (393)
T ss_pred HHHHhhheeEEEecccC-----cHHHHHHHHHHHHcCCceee
Confidence 44455667776664332 23456778889999988754
No 32
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=98.66 E-value=2.5e-07 Score=70.83 Aligned_cols=120 Identities=10% Similarity=0.046 Sum_probs=76.1
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce-----------------------------eecCCceEeecCcc-ccHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV-----------------------------YRSGFDDAFNYKEE-LDLNA 51 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv-----------------------------~~lGad~vi~~~~~-~~~~~ 51 (138)
+++|||+++.+.+++++|+ +|||+|+ |++ .++|+++++++++. .++.+
T Consensus 168 ~~~ta~~~~~~~~~~~~g~-~vlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~ 245 (365)
T cd08277 168 GFSTGYGAAWNTAKVEPGS-TVAVFGL-GAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPKDSDKPVSE 245 (365)
T ss_pred hhHHHHHHHHhhcCCCCCC-EEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEeccccccchHHH
Confidence 5689999988889999999 9999974 777 15788899987652 04577
Q ss_pred HHhhhhccCCCCcc---cc------------eeee-eeeeeecCCCC-CcchhcHHHHHhcCeeeeeeeeccccchHHHH
Q 039288 52 TLKRSVRFFPTCHQ---TA------------ALRF-CEMTSQYNLDL-PENVHNLMFVVFGRSRMQGFIVFDYSSVYPEF 114 (138)
Q Consensus 52 ~v~~~~~~t~~gvd---d~------------~~~~-~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (138)
.+++ .+++|+| |. .+.. .|.+...+... ...+.+...++. ++++.+++...+. .+..
T Consensus 246 ~~~~---~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~--~~~~ 319 (365)
T cd08277 246 VIRE---MTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLIL-GRTWKGSFFGGFK--SRSD 319 (365)
T ss_pred HHHH---HhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHhh-CCEEEeeecCCCC--hHHH
Confidence 7877 6666787 21 1222 24444432211 111223333443 7788876654432 2345
Q ss_pred HHHHHHHHHhCCcee
Q 039288 115 LEMILPYIREKARLS 129 (138)
Q Consensus 115 ~~~~~~~~~~g~l~~ 129 (138)
+.++++++++++++.
T Consensus 320 ~~~~~~~~~~~~~~~ 334 (365)
T cd08277 320 VPKLVSKYMNKKFDL 334 (365)
T ss_pred HHHHHHHHHCCCcCh
Confidence 678889999887653
No 33
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=98.65 E-value=5.2e-07 Score=66.53 Aligned_cols=124 Identities=20% Similarity=0.208 Sum_probs=80.8
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce----------------------------eecCCceEeecCccccHHHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV----------------------------YRSGFDDAFNYKEELDLNATL 53 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv----------------------------~~lGad~vi~~~~~~~~~~~v 53 (138)
.++|||+++.+.+++++|+ +|||+|++|++ .++|++++++++.. ++.+.+
T Consensus 120 ~~~~a~~~l~~~~~~~~g~-~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~ 197 (320)
T cd05286 120 QGLTAHYLLRETYPVKPGD-TVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELARAAGADHVINYRDE-DFVERV 197 (320)
T ss_pred hHHHHHHHHHHhcCCCCCC-EEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHCCCCEEEeCCch-hHHHHH
Confidence 5689999999889999999 99999998888 04678888888776 788888
Q ss_pred hhhhccC-CCCcc---cc-----------eeeeeeeeeecCCC-CCcchhcHHHHHhcCeeeeeeeeccc---cchHHHH
Q 039288 54 KRSVRFF-PTCHQ---TA-----------ALRFCEMTSQYNLD-LPENVHNLMFVVFGRSRMQGFIVFDY---SSVYPEF 114 (138)
Q Consensus 54 ~~~~~~t-~~gvd---d~-----------~~~~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 114 (138)
++ .+ ++|+| +. .+...|.+...+.. ......++..+..+++++.++....+ +...++.
T Consensus 198 ~~---~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (320)
T cd05286 198 RE---ITGGRGVDVVYDGVGKDTFEGSLDSLRPRGTLVSFGNASGPVPPFDLLRLSKGSLFLTRPSLFHYIATREELLAR 274 (320)
T ss_pred HH---HcCCCCeeEEEECCCcHhHHHHHHhhccCcEEEEEecCCCCCCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHH
Confidence 87 66 45788 21 22233333322111 01111222333367888776543322 2345567
Q ss_pred HHHHHHHHHhCCceec
Q 039288 115 LEMILPYIREKARLSM 130 (138)
Q Consensus 115 ~~~~~~~~~~g~l~~~ 130 (138)
++++++++.++++.+.
T Consensus 275 ~~~~~~~~~~~~l~~~ 290 (320)
T cd05286 275 AAELFDAVASGKLKVE 290 (320)
T ss_pred HHHHHHHHHCCCCcCc
Confidence 7889999999988754
No 34
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=98.63 E-value=3e-07 Score=70.50 Aligned_cols=115 Identities=13% Similarity=0.095 Sum_probs=69.7
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce-----------------------------eecCCceEeecCccccHHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV-----------------------------YRSGFDDAFNYKEELDLNAT 52 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv-----------------------------~~lGad~vi~~~~~~~~~~~ 52 (138)
.++|||+++.....+++|+ +|||.|+ |++ .++|+++++|+++. + .
T Consensus 167 ~~~ta~~al~~~~~~~~g~-~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~-~---~ 240 (360)
T PLN02586 167 AGITVYSPMKYYGMTEPGK-HLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDP-E---K 240 (360)
T ss_pred chHHHHHHHHHhcccCCCC-EEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEEcCCCH-H---H
Confidence 4689999998777788999 9999775 888 15688888876543 2 3
Q ss_pred HhhhhccCCCCcc---cc------------eeeeeeeeeecCCCCCcchhcHHHHHhcCeeeeeeeeccccchHHHHHHH
Q 039288 53 LKRSVRFFPTCHQ---TA------------ALRFCEMTSQYNLDLPENVHNLMFVVFGRSRMQGFIVFDYSSVYPEFLEM 117 (138)
Q Consensus 53 v~~~~~~t~~gvd---d~------------~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (138)
+++ .++ ++| |. .+...|.+...+......+.++..++.++.++.+..... .+.+.+
T Consensus 241 ~~~---~~~-~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~ 311 (360)
T PLN02586 241 MKA---AIG-TMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKPLELPIFPLVLGRKLVGGSDIGG-----IKETQE 311 (360)
T ss_pred HHh---hcC-CCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCCCCccCHHHHHhCCeEEEEcCcCC-----HHHHHH
Confidence 444 332 455 21 122223322221110111234445566777776654321 245788
Q ss_pred HHHHHHhCCceece
Q 039288 118 ILPYIREKARLSMR 131 (138)
Q Consensus 118 ~~~~~~~g~l~~~~ 131 (138)
+++++++|++++.+
T Consensus 312 ~~~li~~g~i~~~~ 325 (360)
T PLN02586 312 MLDFCAKHNITADI 325 (360)
T ss_pred HHHHHHhCCCCCcE
Confidence 99999999998765
No 35
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=98.62 E-value=8.3e-07 Score=66.20 Aligned_cols=123 Identities=14% Similarity=0.050 Sum_probs=80.9
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce----------------------------eecCCceEeecCccccHHHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV----------------------------YRSGFDDAFNYKEELDLNATL 53 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv----------------------------~~lGad~vi~~~~~~~~~~~v 53 (138)
+++||| ++.+.+++++|+ +|||+|++|++ .++|+++++++++. ++.+.+
T Consensus 127 ~~~ta~-~~~~~~~~~~~~-~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~ 203 (324)
T cd08244 127 DGRTAL-GLLDLATLTPGD-VVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVRALGADVAVDYTRP-DWPDQV 203 (324)
T ss_pred hHHHHH-HHHHhcCCCCCC-EEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEecCCc-cHHHHH
Confidence 567885 566788999999 99999998888 04688889998887 788888
Q ss_pred hhhhccCC-CCcc---cc-----------eeeeeeeeeecCCC-CCcchhcHHHHHhcCeeeeeeeeccc-cchHHHHHH
Q 039288 54 KRSVRFFP-TCHQ---TA-----------ALRFCEMTSQYNLD-LPENVHNLMFVVFGRSRMQGFIVFDY-SSVYPEFLE 116 (138)
Q Consensus 54 ~~~~~~t~-~gvd---d~-----------~~~~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 116 (138)
.+ .++ +++| |. .+...|.+...+.. ......+....+.+++++.++..... +....+.+.
T Consensus 204 ~~---~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (324)
T cd08244 204 RE---ALGGGGVTVVLDGVGGAIGRAALALLAPGGRFLTYGWASGEWTALDEDDARRRGVTVVGLLGVQAERGGLRALEA 280 (324)
T ss_pred HH---HcCCCCceEEEECCChHhHHHHHHHhccCcEEEEEecCCCCCCccCHHHHhhCCcEEEEeecccCCHHHHHHHHH
Confidence 87 664 5788 21 22233333333211 01012222344678888887765432 234556788
Q ss_pred HHHHHHHhCCceec
Q 039288 117 MILPYIREKARLSM 130 (138)
Q Consensus 117 ~~~~~~~~g~l~~~ 130 (138)
+++++++++++.+.
T Consensus 281 ~~~~~l~~~~l~~~ 294 (324)
T cd08244 281 RALAEAAAGRLVPV 294 (324)
T ss_pred HHHHHHHCCCccCc
Confidence 89999999988654
No 36
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=98.61 E-value=4e-07 Score=69.77 Aligned_cols=119 Identities=13% Similarity=0.042 Sum_probs=77.1
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce-----------------------------eecCCceEeecCc--cccHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV-----------------------------YRSGFDDAFNYKE--ELDLN 50 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv-----------------------------~~lGad~vi~~~~--~~~~~ 50 (138)
+..|||+++.+.+++++|+ +|||+|+ |++ .++|++.++++++ + ++.
T Consensus 171 ~~~ta~~~~~~~~~~~~g~-~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~-~~~ 247 (369)
T cd08301 171 GVSTGLGAAWNVAKVKKGS-TVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPKDHDK-PVQ 247 (369)
T ss_pred hhhHHHHHHHhhcCCCCCC-EEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcccccch-hHH
Confidence 3579999888889999999 9999975 788 1578888898875 4 577
Q ss_pred HHHhhhhccCCCCcc---cc------------eeee-eeeeeecCCCC-C-cchhcHHHHHhcCeeeeeeeeccccchHH
Q 039288 51 ATLKRSVRFFPTCHQ---TA------------ALRF-CEMTSQYNLDL-P-ENVHNLMFVVFGRSRMQGFIVFDYSSVYP 112 (138)
Q Consensus 51 ~~v~~~~~~t~~gvd---d~------------~~~~-~G~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (138)
+.+++ .+++|+| |. .+.. .|.+..++... + ..+.+...+ .+++++.+++...+ ..+
T Consensus 248 ~~v~~---~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~--~~~ 321 (369)
T cd08301 248 EVIAE---MTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNL-LNGRTLKGTLFGGY--KPK 321 (369)
T ss_pred HHHHH---HhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHH-hcCCeEEEEecCCC--ChH
Confidence 77877 6655777 21 1222 13443332211 1 112222233 36888888765543 233
Q ss_pred HHHHHHHHHHHhCCcee
Q 039288 113 EFLEMILPYIREKARLS 129 (138)
Q Consensus 113 ~~~~~~~~~~~~g~l~~ 129 (138)
..++++++++.+|++++
T Consensus 322 ~~~~~~~~~~~~g~~~~ 338 (369)
T cd08301 322 TDLPNLVEKYMKKELEL 338 (369)
T ss_pred HHHHHHHHHHHcCCCCc
Confidence 45778899999998865
No 37
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=98.60 E-value=6.4e-07 Score=66.47 Aligned_cols=116 Identities=16% Similarity=0.094 Sum_probs=74.7
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce----------------------------eecCCceEeecCccccHHHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV----------------------------YRSGFDDAFNYKEELDLNATL 53 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv----------------------------~~lGad~vi~~~~~~~~~~~v 53 (138)
+++|||+++.+.+++++|+ +|||+||+|++ .++|++++++. .. ++.+.+
T Consensus 126 ~~~ta~~~l~~~~~~~~g~-~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~-~~-~~~~~i 202 (320)
T cd08243 126 TYYTAWGSLFRSLGLQPGD-TLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALLKELGADEVVID-DG-AIAEQL 202 (320)
T ss_pred HHHHHHHHHHHhcCCCCCC-EEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEec-Cc-cHHHHH
Confidence 5789999999888999999 99999998888 14688888764 55 688888
Q ss_pred hhhhccCCCCcc---cc-----------------eeeeeeeeeecCCCCCcchhcHHHH--HhcCeeeeeeeeccccchH
Q 039288 54 KRSVRFFPTCHQ---TA-----------------ALRFCEMTSQYNLDLPENVHNLMFV--VFGRSRMQGFIVFDYSSVY 111 (138)
Q Consensus 54 ~~~~~~t~~gvd---d~-----------------~~~~~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 111 (138)
++ . ++|+| |. +++.+|..... . .......... ..+++++.++.... ..
T Consensus 203 ~~---~-~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 272 (320)
T cd08243 203 RA---A-PGGFDKVLELVGTATLKDSLRHLRPGGIVCMTGLLGGQ--W-TLEDFNPMDDIPSGVNLTLTGSSSGD---VP 272 (320)
T ss_pred HH---h-CCCceEEEECCChHHHHHHHHHhccCCEEEEEccCCCC--c-ccCCcchhhhhhhccceEEEecchhh---hh
Confidence 88 6 66787 21 44444432111 0 0000111111 24566666554322 12
Q ss_pred HHHHHHHHHHHHhCCceec
Q 039288 112 PEFLEMILPYIREKARLSM 130 (138)
Q Consensus 112 ~~~~~~~~~~~~~g~l~~~ 130 (138)
...+++++++++++.+++.
T Consensus 273 ~~~~~~~~~~~~~~~~~~~ 291 (320)
T cd08243 273 QTPLQELFDFVAAGHLDIP 291 (320)
T ss_pred HHHHHHHHHHHHCCceecc
Confidence 3567888899999988764
No 38
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=98.58 E-value=7.3e-07 Score=67.02 Aligned_cols=121 Identities=11% Similarity=0.081 Sum_probs=76.0
Q ss_pred chHhHHHHHHhhcCCCC-----CCeEEEEecCCcce-----------------------------eecCCceEeecCccc
Q 039288 2 PGLTAYANLFENFSPKM-----GEEYVFISAAFSSV-----------------------------YRSGFDDAFNYKEEL 47 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~-----g~~~VLI~gaaggv-----------------------------~~lGad~vi~~~~~~ 47 (138)
+++|||++|...+++++ |+ +|||+||+|++ .++|+++++++..
T Consensus 127 ~~~ta~~~l~~~~~~~~~~~~~g~-~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~~~g~~~~~~~~~-- 203 (336)
T TIGR02817 127 TSITAWELLFDRLGINDPVAGDKR-ALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWVLELGAHHVIDHSK-- 203 (336)
T ss_pred HHHHHHHHHHHhcCCCCCCCCCCC-EEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHHHcCCCEEEECCC--
Confidence 57899999988899987 99 99999998888 1468888888754
Q ss_pred cHHHHHhhhhccCCCCcc---cc------------eeeeeeeeeecCCCCCcchhcHHHHHhcCeeeeeeeec-c--c--
Q 039288 48 DLNATLKRSVRFFPTCHQ---TA------------ALRFCEMTSQYNLDLPENVHNLMFVVFGRSRMQGFIVF-D--Y-- 107 (138)
Q Consensus 48 ~~~~~v~~~~~~t~~gvd---d~------------~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~-- 107 (138)
++.+.+++ ..++|+| |. .+...|.+..++... ..+...+..+++++.+..+. . +
T Consensus 204 ~~~~~i~~---~~~~~vd~vl~~~~~~~~~~~~~~~l~~~G~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (336)
T TIGR02817 204 PLKAQLEK---LGLEAVSYVFSLTHTDQHFKEIVELLAPQGRFALIDDPA---ELDISPFKRKSISLHWEFMFTRSMFQT 277 (336)
T ss_pred CHHHHHHH---hcCCCCCEEEEcCCcHHHHHHHHHHhccCCEEEEEcccc---cccchhhhhcceEEEEEEeecccccch
Confidence 57777877 5556777 21 223334443332111 11222233455666543222 1 1
Q ss_pred cchH--HHHHHHHHHHHHhCCceece
Q 039288 108 SSVY--PEFLEMILPYIREKARLSMR 131 (138)
Q Consensus 108 ~~~~--~~~~~~~~~~~~~g~l~~~~ 131 (138)
+... ...++++++++.+|++++.+
T Consensus 278 ~~~~~~~~~~~~~~~l~~~~~l~~~~ 303 (336)
T TIGR02817 278 ADMIEQHHLLNRVARLVDAGKIRTTL 303 (336)
T ss_pred hhhhhhHHHHHHHHHHHHCCCeeccc
Confidence 1112 25678899999999988653
No 39
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.57 E-value=2.8e-07 Score=69.09 Aligned_cols=113 Identities=16% Similarity=0.148 Sum_probs=82.2
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce-----------------------------eecCCceEeecC-ccccHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV-----------------------------YRSGFDDAFNYK-EELDLNA 51 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv-----------------------------~~lGad~vi~~~-~~~~~~~ 51 (138)
+|.|+|..|.+ .++.||+ +|-|.|+.| + ..||||+.++.. ++ |+.+
T Consensus 166 aGITvYspLk~-~g~~pG~-~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~-d~~~ 241 (360)
T KOG0023|consen 166 AGITVYSPLKR-SGLGPGK-WVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDP-DIMK 241 (360)
T ss_pred cceEEeehhHH-cCCCCCc-EEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCH-HHHH
Confidence 47899999975 5788999 999999865 8 159999999887 66 9999
Q ss_pred HHhhhhccCCCCcc------cc-------------eeeeeeeeeecCCCCCcchhcHHHHHhcCeeeeeeeeccccchHH
Q 039288 52 TLKRSVRFFPTCHQ------TA-------------ALRFCEMTSQYNLDLPENVHNLMFVVFGRSRMQGFIVFDYSSVYP 112 (138)
Q Consensus 52 ~v~~~~~~t~~gvd------d~-------------~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (138)
++++ .+..++| +. +++.+|.-.. ....++..++.+++++.+..++. +
T Consensus 242 ~~~~---~~dg~~~~v~~~a~~~~~~~~~~lk~~Gt~V~vg~p~~------~~~~~~~~lil~~~~I~GS~vG~-----~ 307 (360)
T KOG0023|consen 242 AIMK---TTDGGIDTVSNLAEHALEPLLGLLKVNGTLVLVGLPEK------PLKLDTFPLILGRKSIKGSIVGS-----R 307 (360)
T ss_pred HHHH---hhcCcceeeeeccccchHHHHHHhhcCCEEEEEeCcCC------cccccchhhhcccEEEEeecccc-----H
Confidence 9998 7766666 11 4444443221 12234455788999999887764 3
Q ss_pred HHHHHHHHHHHhCCceecee
Q 039288 113 EFLEMILPYIREKARLSMRK 132 (138)
Q Consensus 113 ~~~~~~~~~~~~g~l~~~~~ 132 (138)
...+|+++++.++.+++.+.
T Consensus 308 ket~E~Ldf~a~~~ik~~IE 327 (360)
T KOG0023|consen 308 KETQEALDFVARGLIKSPIE 327 (360)
T ss_pred HHHHHHHHHHHcCCCcCceE
Confidence 45678888889998887664
No 40
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=98.57 E-value=8.7e-07 Score=66.81 Aligned_cols=125 Identities=20% Similarity=0.142 Sum_probs=78.5
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce---------------e-----------------ecCCceEeecCcc--c
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV---------------Y-----------------RSGFDDAFNYKEE--L 47 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv---------------~-----------------~lGad~vi~~~~~--~ 47 (138)
+++|||+++.+.+.+++|+ +|||+|++|++ + ++|+++++++++. .
T Consensus 130 ~~~ta~~~l~~~~~~~~g~-~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 208 (341)
T cd08290 130 NPCTAYRLLEDFVKLQPGD-WVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVLTEEELRSL 208 (341)
T ss_pred cHHHHHHHHHhhcccCCCC-EEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccccc
Confidence 5789999998888999999 99999998888 0 1678888887651 0
Q ss_pred cHHHHHhhhhccCCCCcc---cc-----------eeeeeeeeeecCCC-CCcchhcHHHHHhcCeeeeeeeeccc-----
Q 039288 48 DLNATLKRSVRFFPTCHQ---TA-----------ALRFCEMTSQYNLD-LPENVHNLMFVVFGRSRMQGFIVFDY----- 107 (138)
Q Consensus 48 ~~~~~v~~~~~~t~~gvd---d~-----------~~~~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----- 107 (138)
++...+++ .+++++| |. .+...|.+...+.. ......+...++.+++++.++....+
T Consensus 209 ~~~~~i~~---~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (341)
T cd08290 209 LATELLKS---APGGRPKLALNCVGGKSATELARLLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRGFWLTRWLKRAN 285 (341)
T ss_pred cHHHHHHH---HcCCCceEEEECcCcHhHHHHHHHhCCCCEEEEEeccCCCCcccCHHHHhhCCceEEEEecHHHHhhcC
Confidence 36667766 5533677 21 12222332222110 01111223345678888888765332
Q ss_pred cchHHHHHHHHHHHHHhCCceec
Q 039288 108 SSVYPEFLEMILPYIREKARLSM 130 (138)
Q Consensus 108 ~~~~~~~~~~~~~~~~~g~l~~~ 130 (138)
+......+.++++++.+|++++.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~l~~~ 308 (341)
T cd08290 286 PEEKEDMLEELAELIREGKLKAP 308 (341)
T ss_pred HHHHHHHHHHHHHHHHcCCccCC
Confidence 22344578889999999998764
No 41
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=98.56 E-value=9.7e-07 Score=66.65 Aligned_cols=115 Identities=15% Similarity=0.161 Sum_probs=75.4
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce----------------------------eecCCceEeecCccccHHHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV----------------------------YRSGFDDAFNYKEELDLNATL 53 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv----------------------------~~lGad~vi~~~~~~~~~~~v 53 (138)
+++|||+++... ++++|+ +|||+| +|++ .++|+++++++++. ++.+.+
T Consensus 148 ~~~ta~~~~~~~-~~~~~~-~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~-~~~~~~ 223 (333)
T cd08296 148 AGVTTFNALRNS-GAKPGD-LVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLARKLGAHHYIDTSKE-DVAEAL 223 (333)
T ss_pred hhHHHHHHHHhc-CCCCCC-EEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHcCCcEEecCCCc-cHHHHH
Confidence 468999998655 899999 999999 6887 15789999999887 788888
Q ss_pred hhhhccCCCCcc---cc------------eeeeeeeeeecCCCCCcchhcHHHHHhcCeeeeeeeeccccchHHHHHHHH
Q 039288 54 KRSVRFFPTCHQ---TA------------ALRFCEMTSQYNLDLPENVHNLMFVVFGRSRMQGFIVFDYSSVYPEFLEMI 118 (138)
Q Consensus 54 ~~~~~~t~~gvd---d~------------~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (138)
++ . +|+| |. .+...|.+...+......+.+...++.+++++.++... ....++++
T Consensus 224 ~~---~--~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-----~~~~~~~~ 293 (333)
T cd08296 224 QE---L--GGAKLILATAPNAKAISALVGGLAPRGKLLILGAAGEPVAVSPLQLIMGRKSIHGWPSG-----TALDSEDT 293 (333)
T ss_pred Hh---c--CCCCEEEECCCchHHHHHHHHHcccCCEEEEEecCCCCCCcCHHHHhhcccEEEEeCcC-----CHHHHHHH
Confidence 77 4 2455 11 12223333322211111123344566789999886532 23456677
Q ss_pred HHHHHhCCceec
Q 039288 119 LPYIREKARLSM 130 (138)
Q Consensus 119 ~~~~~~g~l~~~ 130 (138)
+++++++++++.
T Consensus 294 ~~~~~~~~l~~~ 305 (333)
T cd08296 294 LKFSALHGVRPM 305 (333)
T ss_pred HHHHHhCCCCce
Confidence 888888888754
No 42
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=98.55 E-value=9.7e-07 Score=67.78 Aligned_cols=58 Identities=10% Similarity=0.119 Sum_probs=46.9
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce-----------------------------eecCCceEeecCc--cccHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV-----------------------------YRSGFDDAFNYKE--ELDLN 50 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv-----------------------------~~lGad~vi~~~~--~~~~~ 50 (138)
++.|||+++.+.+++++|+ +|||+|+ |++ .++|+++++|+++ + ++.
T Consensus 169 ~~~ta~~a~~~~~~~~~g~-~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~~~~-~~~ 245 (368)
T TIGR02818 169 GVTTGIGAVLNTAKVEEGD-TVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPNDYDK-PIQ 245 (368)
T ss_pred hhHHHHHHHHHhcCCCCCC-EEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEcccccch-hHH
Confidence 5689999998889999999 9999975 787 1678999998874 4 577
Q ss_pred HHHhhhhccCCCCcc
Q 039288 51 ATLKRSVRFFPTCHQ 65 (138)
Q Consensus 51 ~~v~~~~~~t~~gvd 65 (138)
+.+++ ++++|+|
T Consensus 246 ~~v~~---~~~~g~d 257 (368)
T TIGR02818 246 EVIVE---ITDGGVD 257 (368)
T ss_pred HHHHH---HhCCCCC
Confidence 78888 7755787
No 43
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=98.54 E-value=1e-06 Score=66.82 Aligned_cols=118 Identities=18% Similarity=0.066 Sum_probs=73.9
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce-----------------------------eecCCceEeecCccccHHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV-----------------------------YRSGFDDAFNYKEELDLNAT 52 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv-----------------------------~~lGad~vi~~~~~~~~~~~ 52 (138)
+++|||+++.....+++|+ +|||+| +|++ .++|++.++++++. ++.+.
T Consensus 159 ~~~tA~~~~~~~~~~~~~~-~vlI~g-~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~ 235 (350)
T cd08240 159 SGLTAYSAVKKLMPLVADE-PVVIIG-AGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNGSDP-DAAKR 235 (350)
T ss_pred hhhhHHHHHHhcccCCCCC-EEEEEC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCcEEecCCCc-cHHHH
Confidence 5789999998888788999 999995 5777 04577788888776 77777
Q ss_pred HhhhhccCCCCcc---cc------------eeeeeeeeeecCCCCCcchhcHHHHHhcCeeeeeeeeccccchHHHHHHH
Q 039288 53 LKRSVRFFPTCHQ---TA------------ALRFCEMTSQYNLDLPENVHNLMFVVFGRSRMQGFIVFDYSSVYPEFLEM 117 (138)
Q Consensus 53 v~~~~~~t~~gvd---d~------------~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (138)
+.+ ..++++| |. .+...|.+...+........+......+++++.+..... .+.+.+
T Consensus 236 ~~~---~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~ 307 (350)
T cd08240 236 IIK---AAGGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEATLPLPLLPLRALTIQGSYVGS-----LEELRE 307 (350)
T ss_pred HHH---HhCCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCCCcccHHHHhhcCcEEEEcccCC-----HHHHHH
Confidence 877 5544777 21 122333333221111111112222345777777654432 256778
Q ss_pred HHHHHHhCCceec
Q 039288 118 ILPYIREKARLSM 130 (138)
Q Consensus 118 ~~~~~~~g~l~~~ 130 (138)
+++++++|.+++.
T Consensus 308 ~~~ll~~~~i~~~ 320 (350)
T cd08240 308 LVALAKAGKLKPI 320 (350)
T ss_pred HHHHHHcCCCccc
Confidence 8899999988754
No 44
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=98.51 E-value=1.1e-06 Score=65.80 Aligned_cols=59 Identities=27% Similarity=0.335 Sum_probs=49.8
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce----------------------------eecCCceEeecCccccHHHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV----------------------------YRSGFDDAFNYKEELDLNATL 53 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv----------------------------~~lGad~vi~~~~~~~~~~~v 53 (138)
+++|||+++.+.+++++|+ +|+|+||+|++ .++|+++++++++. ++.+.+
T Consensus 124 ~~~ta~~~l~~~~~~~~g~-~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~ 201 (327)
T PRK10754 124 KGLTVYYLLRKTYEIKPDE-QFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRAKKAGAWQVINYREE-NIVERV 201 (327)
T ss_pred HHHHHHHHHHhhcCCCCCC-EEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEEcCCCC-cHHHHH
Confidence 4689999998889999999 99999988888 15688899998887 888888
Q ss_pred hhhhccCC-CCcc
Q 039288 54 KRSVRFFP-TCHQ 65 (138)
Q Consensus 54 ~~~~~~t~-~gvd 65 (138)
++ .++ +|+|
T Consensus 202 ~~---~~~~~~~d 211 (327)
T PRK10754 202 KE---ITGGKKVR 211 (327)
T ss_pred HH---HcCCCCeE
Confidence 88 774 6788
No 45
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=98.50 E-value=1.5e-06 Score=64.27 Aligned_cols=124 Identities=21% Similarity=0.261 Sum_probs=79.2
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce----------------------------eecCCceEeecCccccHHHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV----------------------------YRSGFDDAFNYKEELDLNATL 53 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv----------------------------~~lGad~vi~~~~~~~~~~~v 53 (138)
++.|||+++.+.+++++|+ +|+|+|++|++ .++|+++++++... ++.+.+
T Consensus 128 ~~~~a~~~l~~~~~~~~g~-~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~ 205 (325)
T cd08253 128 PALTAYRALFHRAGAKAGE-TVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVRQAGADAVFNYRAE-DLADRI 205 (325)
T ss_pred HHHHHHHHHHHHhCCCCCC-EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCc-CHHHHH
Confidence 5789999998889999999 99999998888 04578888888877 788888
Q ss_pred hhhhccCC-CCcc---cc-----------eeeeeeeeeecCCCCCcchhcHHHHHhcCeeeeeeeeccc-cchHHHHHHH
Q 039288 54 KRSVRFFP-TCHQ---TA-----------ALRFCEMTSQYNLDLPENVHNLMFVVFGRSRMQGFIVFDY-SSVYPEFLEM 117 (138)
Q Consensus 54 ~~~~~~t~-~gvd---d~-----------~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 117 (138)
.+ .++ +++| +. .+...|.+...+......+.++..++.+++++.+...... +....+.+++
T Consensus 206 ~~---~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (325)
T cd08253 206 LA---ATAGQGVDVIIEVLANVNLAKDLDVLAPGGRIVVYGSGGLRGTIPINPLMAKEASIRGVLLYTATPEERAAAAEA 282 (325)
T ss_pred HH---HcCCCceEEEEECCchHHHHHHHHhhCCCCEEEEEeecCCcCCCChhHHHhcCceEEeeehhhcCHHHHHHHHHH
Confidence 87 653 5788 21 1222233322211001112223334556777766543322 2345567788
Q ss_pred HHHHHHhCCceec
Q 039288 118 ILPYIREKARLSM 130 (138)
Q Consensus 118 ~~~~~~~g~l~~~ 130 (138)
+.+++.++.+++.
T Consensus 283 ~~~~~~~~~i~~~ 295 (325)
T cd08253 283 IAAGLADGALRPV 295 (325)
T ss_pred HHHHHHCCCccCc
Confidence 8888888887654
No 46
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=98.49 E-value=1.6e-06 Score=65.52 Aligned_cols=116 Identities=18% Similarity=0.056 Sum_probs=72.1
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce--------e-------------------ecCCceEeecCccccHHHHHh
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV--------Y-------------------RSGFDDAFNYKEELDLNATLK 54 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv--------~-------------------~lGad~vi~~~~~~~~~~~v~ 54 (138)
+++|||+++ ..+++++|+ +|||+|++|++ . ++|++++++..+. .+.+ .
T Consensus 162 ~~~ta~~~~-~~~~~~~g~-~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~--~ 236 (350)
T cd08274 162 SYSTAENML-ERAGVGAGE-TVLVTGASGGVGSALVQLAKRRGAIVIAVAGAAKEEAVRALGADTVILRDAP-LLAD--A 236 (350)
T ss_pred HHHHHHHHH-hhcCCCCCC-EEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCchhhHHHHhcCCeEEEeCCCc-cHHH--H
Confidence 578999988 678999999 99999998888 0 3466666665544 4433 4
Q ss_pred hhhccC-CCCcc---cc-----------eeeeeeeeeecCCC-CCcchhcHHHHHhcCeeeeeeeeccccchHHHHHHHH
Q 039288 55 RSVRFF-PTCHQ---TA-----------ALRFCEMTSQYNLD-LPENVHNLMFVVFGRSRMQGFIVFDYSSVYPEFLEMI 118 (138)
Q Consensus 55 ~~~~~t-~~gvd---d~-----------~~~~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (138)
+ .+ ++|+| |. .+...|.+...+.. .+..+.++..++.+++++.+.... ..+.+.++
T Consensus 237 ~---~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 308 (350)
T cd08274 237 K---ALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLTLFGSTLG-----TREVFRRL 308 (350)
T ss_pred H---hhCCCCCcEEEecCCHHHHHHHHHHhccCCEEEEecccCCccccCCHHHhhhcceEEEEeecC-----CHHHHHHH
Confidence 4 44 46788 21 12233333322111 111223444556788888776542 34567888
Q ss_pred HHHHHhCCceec
Q 039288 119 LPYIREKARLSM 130 (138)
Q Consensus 119 ~~~~~~g~l~~~ 130 (138)
++++.++++++.
T Consensus 309 ~~l~~~~~l~~~ 320 (350)
T cd08274 309 VRYIEEGEIRPV 320 (350)
T ss_pred HHHHHCCCcccc
Confidence 999999988764
No 47
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=98.49 E-value=1.8e-06 Score=66.02 Aligned_cols=119 Identities=16% Similarity=0.057 Sum_probs=78.0
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce-----------------------------eecCCceEeecCccccHHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV-----------------------------YRSGFDDAFNYKEELDLNAT 52 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv-----------------------------~~lGad~vi~~~~~~~~~~~ 52 (138)
+++|||+++.+.+.+++|+ +|||+| +|++ .++|+++++++++. ++.++
T Consensus 171 ~~~tA~~~l~~~~~~~~g~-~VlI~g-~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v~~~~~~-~~~~~ 247 (367)
T cd08263 171 AGFTAYGALKHAADVRPGE-TVAVIG-VGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTVNAAKE-DAVAA 247 (367)
T ss_pred hHHHHHHHHHhcccCCCCC-EEEEEC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceEecCCcc-cHHHH
Confidence 5789999999888999999 999995 6777 04577888898887 78888
Q ss_pred HhhhhccC-CCCcc---c------c------eeeeeeeeeecCCC--CCcchhcHHHHHhcCeeeeeeeeccccchHHHH
Q 039288 53 LKRSVRFF-PTCHQ---T------A------ALRFCEMTSQYNLD--LPENVHNLMFVVFGRSRMQGFIVFDYSSVYPEF 114 (138)
Q Consensus 53 v~~~~~~t-~~gvd---d------~------~~~~~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (138)
+++ .+ ++++| | . .+...|.+..++.. ....+.++..++.+++++.+.... ..++.
T Consensus 248 l~~---~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 320 (367)
T cd08263 248 IRE---ITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRRGIKIIGSYGA----RPRQD 320 (367)
T ss_pred HHH---HhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHHhhCCeEEEecCCC----CcHHH
Confidence 887 55 35777 2 1 12233333333211 111123344445678777664221 12456
Q ss_pred HHHHHHHHHhCCceec
Q 039288 115 LEMILPYIREKARLSM 130 (138)
Q Consensus 115 ~~~~~~~~~~g~l~~~ 130 (138)
+++++++++++++++.
T Consensus 321 ~~~~~~ll~~~~l~~~ 336 (367)
T cd08263 321 LPELVGLAASGKLDPE 336 (367)
T ss_pred HHHHHHHHHcCCCCcc
Confidence 7889999999998763
No 48
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=98.49 E-value=2.1e-06 Score=63.64 Aligned_cols=120 Identities=8% Similarity=-0.064 Sum_probs=78.3
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce-----------------------------eecCCceEeecCccccHHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV-----------------------------YRSGFDDAFNYKEELDLNAT 52 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv-----------------------------~~lGad~vi~~~~~~~~~~~ 52 (138)
+++|||+++. .+++++|+ +|||+| +|++ .++|++++++++.. ++.+.
T Consensus 114 ~~~~a~~~~~-~~~~~~~~-~vlI~g-~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~ 189 (312)
T cd08269 114 PLGCALNVFR-RGWIRAGK-TVAVIG-AGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDSE-AIVER 189 (312)
T ss_pred hHHHHHHHHH-hcCCCCCC-EEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCCCc-CHHHH
Confidence 5678999886 88999999 999996 5777 04577788887776 78888
Q ss_pred HhhhhccCC-CCcc---cc------------eeeeeeeeeecCCC-CCcchhcHHHHHhcCeeeeeeeeccccchHHHHH
Q 039288 53 LKRSVRFFP-TCHQ---TA------------ALRFCEMTSQYNLD-LPENVHNLMFVVFGRSRMQGFIVFDYSSVYPEFL 115 (138)
Q Consensus 53 v~~~~~~t~-~gvd---d~------------~~~~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (138)
+.+ .++ .|+| |. .+...|.+..++.. ....+.++..+..+++++.++.... +....+.+
T Consensus 190 l~~---~~~~~~vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 265 (312)
T cd08269 190 VRE---LTGGAGADVVIEAVGHQWPLDLAGELVAERGRLVIFGYHQDGPRPVPFQTWNWKGIDLINAVERD-PRIGLEGM 265 (312)
T ss_pred HHH---HcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCCcccCHHHHhhcCCEEEEecccC-ccchhhHH
Confidence 888 664 6888 21 22233443333211 1111223334566777776654322 23445678
Q ss_pred HHHHHHHHhCCcee
Q 039288 116 EMILPYIREKARLS 129 (138)
Q Consensus 116 ~~~~~~~~~g~l~~ 129 (138)
+++++++++|++++
T Consensus 266 ~~~~~~~~~~~l~~ 279 (312)
T cd08269 266 REAVKLIADGRLDL 279 (312)
T ss_pred HHHHHHHHcCCCCc
Confidence 89999999999876
No 49
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=98.48 E-value=1.6e-06 Score=65.76 Aligned_cols=115 Identities=13% Similarity=0.042 Sum_probs=72.0
Q ss_pred hHhHHHHHHhhcCCCCCCeEEEEecCCcce-----------------------------eecCCceEeecCccccHHHHH
Q 039288 3 GLTAYANLFENFSPKMGEEYVFISAAFSSV-----------------------------YRSGFDDAFNYKEELDLNATL 53 (138)
Q Consensus 3 ~~TA~~~L~~~~~~~~g~~~VLI~gaaggv-----------------------------~~lGad~vi~~~~~~~~~~~v 53 (138)
..++|+++ +.+++++|+ +|||+|+ |++ .++|+++++|+++. + .+.+
T Consensus 146 ~~~~~~~~-~~~~~~~g~-~vlV~G~-g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~-~-~~~~ 220 (347)
T PRK10309 146 ITVGLHAF-HLAQGCEGK-NVIIIGA-GTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSREM-S-APQI 220 (347)
T ss_pred HHHHHHHH-HhcCCCCCC-EEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCccc-C-HHHH
Confidence 34567775 567899999 9999974 778 15788999998876 5 5566
Q ss_pred hhhhccC-CCCcc----cc------------------eeeeeeeeeecCCCCCcchhcHHHHHhcCeeeeeeeeccccch
Q 039288 54 KRSVRFF-PTCHQ----TA------------------ALRFCEMTSQYNLDLPENVHNLMFVVFGRSRMQGFIVFDYSSV 110 (138)
Q Consensus 54 ~~~~~~t-~~gvd----d~------------------~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (138)
.+ .+ +.++| |. +++.+|.... .....+.++..++.+++++.+++.......
T Consensus 221 ~~---~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~---~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 294 (347)
T PRK10309 221 QS---VLRELRFDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHH---DLHLTSATFGKILRKELTVIGSWMNYSSPW 294 (347)
T ss_pred HH---HhcCCCCCeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC---CcccChhhhhHHhhcCcEEEEEeccccCCc
Confidence 66 55 34665 21 4555543221 111112223346678899988755321111
Q ss_pred HHHHHHHHHHHHHhCCce
Q 039288 111 YPEFLEMILPYIREKARL 128 (138)
Q Consensus 111 ~~~~~~~~~~~~~~g~l~ 128 (138)
.++.++++++++++|+++
T Consensus 295 ~~~~~~~~~~~~~~g~i~ 312 (347)
T PRK10309 295 PGQEWETASRLLTERKLS 312 (347)
T ss_pred chhHHHHHHHHHHcCCCC
Confidence 235677899999999985
No 50
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=98.48 E-value=1.7e-06 Score=65.47 Aligned_cols=117 Identities=21% Similarity=0.119 Sum_probs=76.8
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce----------------------------eecCCceEeecCc-cccHHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV----------------------------YRSGFDDAFNYKE-ELDLNAT 52 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv----------------------------~~lGad~vi~~~~-~~~~~~~ 52 (138)
+++|||+++.+.+++.+|+ +|||+| +|++ .++|+++++++++ . ++...
T Consensus 149 ~~~ta~~~l~~~~~~~~~~-~vlV~g-~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~-~~~~~ 225 (345)
T cd08260 149 RFATAFRALVHQARVKPGE-WVAVHG-CGGVGLSAVMIASALGARVIAVDIDDDKLELARELGAVATVNASEVE-DVAAA 225 (345)
T ss_pred chHHHHHHHHHccCCCCCC-EEEEEC-CCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHhCCCEEEccccch-hHHHH
Confidence 5789999998889999999 999999 6777 1468899999987 7 78888
Q ss_pred HhhhhccCCCCcc---cc------------eeeeeeeeeecCCC--CC-cchhcHHHHHhcCeeeeeeeeccccchHHHH
Q 039288 53 LKRSVRFFPTCHQ---TA------------ALRFCEMTSQYNLD--LP-ENVHNLMFVVFGRSRMQGFIVFDYSSVYPEF 114 (138)
Q Consensus 53 v~~~~~~t~~gvd---d~------------~~~~~G~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (138)
+.+ .+++++| |. .+...|.+...+.. .. ..+.++..++.+++++.+.... .++.
T Consensus 226 ~~~---~~~~~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 297 (345)
T cd08260 226 VRD---LTGGGAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGM-----PAHR 297 (345)
T ss_pred HHH---HhCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcC-----CHHH
Confidence 887 5544677 21 12222322222110 01 0123334455677777765431 2456
Q ss_pred HHHHHHHHHhCCcee
Q 039288 115 LEMILPYIREKARLS 129 (138)
Q Consensus 115 ~~~~~~~~~~g~l~~ 129 (138)
++++++++++|++.+
T Consensus 298 ~~~~~~l~~~~~i~~ 312 (345)
T cd08260 298 YDAMLALIASGKLDP 312 (345)
T ss_pred HHHHHHHHHcCCCCh
Confidence 778889999998865
No 51
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=98.47 E-value=1.7e-06 Score=64.68 Aligned_cols=107 Identities=15% Similarity=0.093 Sum_probs=73.2
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce------------------------------eecCCceEeecCccccHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV------------------------------YRSGFDDAFNYKEELDLNA 51 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv------------------------------~~lGad~vi~~~~~~~~~~ 51 (138)
+++|||+++...+++++|+ +|||.| +|++ .++|++++ ++++. ++.+
T Consensus 148 ~~~~a~~~l~~~~~~~~g~-~vlI~g-~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~~~~~~~g~~~~-~~~~~-~~~~ 223 (306)
T cd08258 148 PLAVAVHAVAERSGIRPGD-TVVVFG-PGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKELGADAV-NGGEE-DLAE 223 (306)
T ss_pred hHHHHHHHHHHhcCCCCCC-EEEEEC-CCHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHhCCccc-CCCcC-CHHH
Confidence 5688999998899999999 999976 5767 03466777 77777 7888
Q ss_pred HHhhhhccCC-CCcc---cc------------------eeeeeeeeeecCCCCCcchhcHHHHHhcCeeeeeeeeccccc
Q 039288 52 TLKRSVRFFP-TCHQ---TA------------------ALRFCEMTSQYNLDLPENVHNLMFVVFGRSRMQGFIVFDYSS 109 (138)
Q Consensus 52 ~v~~~~~~t~-~gvd---d~------------------~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (138)
.+.+ .++ +++| |. +++.+|.... .....+...++.+++++.++++..
T Consensus 224 ~l~~---~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~--- 292 (306)
T cd08258 224 LVNE---ITDGDGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGP-----LAASIDVERIIQKELSVIGSRSST--- 292 (306)
T ss_pred HHHH---HcCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCC-----CCcccCHHHHhhcCcEEEEEecCc---
Confidence 8877 553 5787 21 4444444321 112234556678999999987643
Q ss_pred hHHHHHHHHHHHHHhC
Q 039288 110 VYPEFLEMILPYIREK 125 (138)
Q Consensus 110 ~~~~~~~~~~~~~~~g 125 (138)
++.++++++++++|
T Consensus 293 --~~~~~~~~~~~~~~ 306 (306)
T cd08258 293 --PASWETALRLLASG 306 (306)
T ss_pred --hHhHHHHHHHHhcC
Confidence 23477778887765
No 52
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=98.47 E-value=2.1e-06 Score=66.26 Aligned_cols=115 Identities=14% Similarity=0.110 Sum_probs=70.2
Q ss_pred chHhHHHHHHhhcC-CCCCCeEEEEecCCcce-----------------------------eecCCceEeecCccccHHH
Q 039288 2 PGLTAYANLFENFS-PKMGEEYVFISAAFSSV-----------------------------YRSGFDDAFNYKEELDLNA 51 (138)
Q Consensus 2 ~~~TA~~~L~~~~~-~~~g~~~VLI~gaaggv-----------------------------~~lGad~vi~~~~~~~~~~ 51 (138)
+++|||+++..... .++|+ +|+|.|+ |++ .++|+++++|+++. +
T Consensus 161 ~~~ta~~al~~~~~~~~~g~-~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~----~ 234 (375)
T PLN02178 161 AGITVYSPMKYYGMTKESGK-RLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDS----Q 234 (375)
T ss_pred cchHHHHHHHHhCCCCCCCC-EEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCcEEEcCcCH----H
Confidence 46799999876543 36899 9999986 788 15688888876542 2
Q ss_pred HHhhhhccCCCCcc---cc------------eeeeeeeeeecCCCCCcchhcHHHHHhcCeeeeeeeeccccchHHHHHH
Q 039288 52 TLKRSVRFFPTCHQ---TA------------ALRFCEMTSQYNLDLPENVHNLMFVVFGRSRMQGFIVFDYSSVYPEFLE 116 (138)
Q Consensus 52 ~v~~~~~~t~~gvd---d~------------~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (138)
.+++ .++ ++| |. .+...|.+...+......+.++..++.+++++.+..... .+.+.
T Consensus 235 ~v~~---~~~-~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~ 305 (375)
T PLN02178 235 KMKE---AVG-TMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEKPLDLPIFPLVLGRKMVGGSQIGG-----MKETQ 305 (375)
T ss_pred HHHH---hhC-CCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCCCCccCHHHHHhCCeEEEEeCccC-----HHHHH
Confidence 3444 332 456 21 122233333222111111234556677888888765432 24577
Q ss_pred HHHHHHHhCCceece
Q 039288 117 MILPYIREKARLSMR 131 (138)
Q Consensus 117 ~~~~~~~~g~l~~~~ 131 (138)
++++++++|++++.+
T Consensus 306 ~~~~l~~~g~i~~~i 320 (375)
T PLN02178 306 EMLEFCAKHKIVSDI 320 (375)
T ss_pred HHHHHHHhCCCcccE
Confidence 889999999998765
No 53
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=98.46 E-value=2.5e-06 Score=64.25 Aligned_cols=117 Identities=20% Similarity=0.154 Sum_probs=71.8
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce-----------------------------eecCCceEeecCc-cccHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV-----------------------------YRSGFDDAFNYKE-ELDLNA 51 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv-----------------------------~~lGad~vi~~~~-~~~~~~ 51 (138)
+++|||+++ +.+++++|+ +|||+| +|++ .++|++.+++++. . ++.+
T Consensus 147 ~~~ta~~~~-~~~~~~~g~-~vlV~g-~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~~ 222 (338)
T PRK09422 147 AGVTTYKAI-KVSGIKPGQ-WIAIYG-AGGLGNLALQYAKNVFNAKVIAVDINDDKLALAKEVGADLTINSKRVE-DVAK 222 (338)
T ss_pred chhHHHHHH-HhcCCCCCC-EEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHHcCCcEEecccccc-cHHH
Confidence 578999998 678999999 999999 5776 1467888888865 5 6777
Q ss_pred HHhhhhccCCCCcc----c---------c--eeeeeeeeeecCCCCCcchhcHHHHHhcCeeeeeeeeccccchHHHHHH
Q 039288 52 TLKRSVRFFPTCHQ----T---------A--ALRFCEMTSQYNLDLPENVHNLMFVVFGRSRMQGFIVFDYSSVYPEFLE 116 (138)
Q Consensus 52 ~v~~~~~~t~~gvd----d---------~--~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (138)
.+++ .++ |+| + . .+...|.+...+......+.+...+..+++++.+.... .++.++
T Consensus 223 ~v~~---~~~-~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 293 (338)
T PRK09422 223 IIQE---KTG-GAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPESMDLSIPRLVLDGIEVVGSLVG-----TRQDLE 293 (338)
T ss_pred HHHH---hcC-CCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCCCceecHHHHhhcCcEEEEecCC-----CHHHHH
Confidence 7777 554 454 1 0 12222333222111111122334445566776554321 234677
Q ss_pred HHHHHHHhCCceece
Q 039288 117 MILPYIREKARLSMR 131 (138)
Q Consensus 117 ~~~~~~~~g~l~~~~ 131 (138)
++++++++|++.+.+
T Consensus 294 ~~~~l~~~g~l~~~v 308 (338)
T PRK09422 294 EAFQFGAEGKVVPKV 308 (338)
T ss_pred HHHHHHHhCCCCccE
Confidence 888999999886543
No 54
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=98.46 E-value=2.2e-06 Score=64.67 Aligned_cols=116 Identities=13% Similarity=0.056 Sum_probs=75.2
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce----------------------------eecCCceEeecCccccHHHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV----------------------------YRSGFDDAFNYKEELDLNATL 53 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv----------------------------~~lGad~vi~~~~~~~~~~~v 53 (138)
+++||++++ +.+++++|+ +|||+| +|++ .++|+++++++++. ++.+.+
T Consensus 144 ~~~~a~~~~-~~~~l~~g~-~vLI~g-~g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~~~~~g~~~v~~~~~~-~~~~~l 219 (337)
T cd08261 144 PLAIGAHAV-RRAGVTAGD-TVLVVG-AGPIGLGVIQVAKARGARVIVVDIDDERLEFARELGADDTINVGDE-DVAARL 219 (337)
T ss_pred hHHHHHHHH-HhcCCCCCC-EEEEEC-CCHHHHHHHHHHHHcCCeEEEECCCHHHHHHHHHhCCCEEecCccc-CHHHHH
Confidence 467888887 788999999 999996 5666 14689999999988 888888
Q ss_pred hhhhccCC-CCcc---cc------------eeeeeeeeeecCCCCCcchhcHHHHHhcCeeeeeeeeccccchHHHHHHH
Q 039288 54 KRSVRFFP-TCHQ---TA------------ALRFCEMTSQYNLDLPENVHNLMFVVFGRSRMQGFIVFDYSSVYPEFLEM 117 (138)
Q Consensus 54 ~~~~~~t~-~gvd---d~------------~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (138)
.+ .++ +++| |. .+...|.+..++........+...+..+++++.+.. ...++.+++
T Consensus 220 ~~---~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 291 (337)
T cd08261 220 RE---LTDGEGADVVIDATGNPASMEEAVELVAHGGRVVLVGLSKGPVTFPDPEFHKKELTILGSR-----NATREDFPD 291 (337)
T ss_pred HH---HhCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCCCCccCHHHHHhCCCEEEEec-----cCChhhHHH
Confidence 88 664 5787 21 122333333222111111122233445666665532 134557788
Q ss_pred HHHHHHhCCcee
Q 039288 118 ILPYIREKARLS 129 (138)
Q Consensus 118 ~~~~~~~g~l~~ 129 (138)
+++++++|++++
T Consensus 292 ~~~l~~~~~i~~ 303 (337)
T cd08261 292 VIDLLESGKVDP 303 (337)
T ss_pred HHHHHHcCCCCh
Confidence 899999999986
No 55
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=98.46 E-value=2.5e-06 Score=63.79 Aligned_cols=118 Identities=19% Similarity=0.163 Sum_probs=78.5
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce----------------------------eecCCceEeecCc-cccHHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV----------------------------YRSGFDDAFNYKE-ELDLNAT 52 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv----------------------------~~lGad~vi~~~~-~~~~~~~ 52 (138)
+++|||+++.+.+++++|+ +|+|+| +|++ .++|++++++++. . ++.+.
T Consensus 144 ~~~~a~~~l~~~~~~~~g~-~vli~g-~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~ 220 (336)
T cd08276 144 AGLTAWNALFGLGPLKPGD-TVLVQG-TGGVSLFALQFAKAAGARVIATSSSDEKLERAKALGADHVINYRTTP-DWGEE 220 (336)
T ss_pred HHHHHHHHHHhhcCCCCCC-EEEEEC-CcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEcCCccc-CHHHH
Confidence 5689999998889999999 999995 5667 0458889998877 6 78888
Q ss_pred HhhhhccCC-CCcc---cc-----------eeeeeeeeeecCCC-CCcchhcHHHHHhcCeeeeeeeeccccchHHHHHH
Q 039288 53 LKRSVRFFP-TCHQ---TA-----------ALRFCEMTSQYNLD-LPENVHNLMFVVFGRSRMQGFIVFDYSSVYPEFLE 116 (138)
Q Consensus 53 v~~~~~~t~-~gvd---d~-----------~~~~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (138)
+++ .++ +|+| |. .+...|.+...+.. ....+.+....+.+++++.++.... .+.+.
T Consensus 221 ~~~---~~~~~~~d~~i~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 292 (336)
T cd08276 221 VLK---LTGGRGVDHVVEVGGPGTLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGS-----RAQFE 292 (336)
T ss_pred HHH---HcCCCCCcEEEECCChHHHHHHHHhhcCCCEEEEEccCCCCccCcCHHHHhhcceEEEEEecCc-----HHHHH
Confidence 888 664 6888 21 23333433332211 1111223345567889888876532 44677
Q ss_pred HHHHHHHhCCceec
Q 039288 117 MILPYIREKARLSM 130 (138)
Q Consensus 117 ~~~~~~~~g~l~~~ 130 (138)
++.+++.++.+.+.
T Consensus 293 ~~~~l~~~~~l~~~ 306 (336)
T cd08276 293 AMNRAIEAHRIRPV 306 (336)
T ss_pred HHHHHHHcCCcccc
Confidence 77888888877654
No 56
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=98.46 E-value=3.4e-06 Score=63.35 Aligned_cols=122 Identities=15% Similarity=0.089 Sum_probs=75.7
Q ss_pred chHhHHHHHHhhcCCCC-----CCeEEEEecCCcce-----------------------------eecCCceEeecCccc
Q 039288 2 PGLTAYANLFENFSPKM-----GEEYVFISAAFSSV-----------------------------YRSGFDDAFNYKEEL 47 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~-----g~~~VLI~gaaggv-----------------------------~~lGad~vi~~~~~~ 47 (138)
.++|||+++.+.+++++ |+ +|+|+|++|++ .++|+++++++++
T Consensus 128 ~~~ta~~~l~~~~~~~~~~~~~g~-~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-- 204 (336)
T cd08252 128 TSLTAWEALFDRLGISEDAENEGK-TLLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWVKELGADHVINHHQ-- 204 (336)
T ss_pred HHHHHHHHHHHhcCCCCCcCCCCC-EEEEEcCCchHHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCcEEEeCCc--
Confidence 46899999988888988 99 99999988877 0357778888763
Q ss_pred cHHHHHhhhhccCCCCcc---cc------------eeeeeeeeeecCCCCCcchhcHHHHHhcCeeeeeeeecc---c--
Q 039288 48 DLNATLKRSVRFFPTCHQ---TA------------ALRFCEMTSQYNLDLPENVHNLMFVVFGRSRMQGFIVFD---Y-- 107 (138)
Q Consensus 48 ~~~~~v~~~~~~t~~gvd---d~------------~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-- 107 (138)
++.+.++. ..++++| |. .+...|.+...+... .+.+...+..+++++.+..+.. +
T Consensus 205 ~~~~~i~~---~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (336)
T cd08252 205 DLAEQLEA---LGIEPVDYIFCLTDTDQHWDAMAELIAPQGHICLIVDPQ--EPLDLGPLKSKSASFHWEFMFTRSMFQT 279 (336)
T ss_pred cHHHHHHh---hCCCCCCEEEEccCcHHHHHHHHHHhcCCCEEEEecCCC--CcccchhhhcccceEEEEEeeccccccc
Confidence 56666665 4445677 21 222333333322111 1122222335777777654322 1
Q ss_pred --cchHHHHHHHHHHHHHhCCceece
Q 039288 108 --SSVYPEFLEMILPYIREKARLSMR 131 (138)
Q Consensus 108 --~~~~~~~~~~~~~~~~~g~l~~~~ 131 (138)
+....+.+.++++++.+|.+++..
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~l~~~~ 305 (336)
T cd08252 280 PDMIEQHEILNEVADLLDAGKLKTTL 305 (336)
T ss_pred cchhhHHHHHHHHHHHHHCCCEecce
Confidence 113456788899999999998653
No 57
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=98.45 E-value=2.7e-06 Score=63.01 Aligned_cols=124 Identities=23% Similarity=0.216 Sum_probs=78.5
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce--------e--------------------ecCCceEeecCccccHHHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV--------Y--------------------RSGFDDAFNYKEELDLNATL 53 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv--------~--------------------~lGad~vi~~~~~~~~~~~v 53 (138)
+++|||+++.+.+++++|+ +|+|+|++|++ . ++|++.++++... ++.+.+
T Consensus 123 ~~~ta~~~~~~~~~~~~~~-~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~ 200 (325)
T TIGR02824 123 TFFTVWSNLFQRGGLKAGE-TVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAACEALGADIAINYREE-DFVEVV 200 (325)
T ss_pred HHHHHHHHHHHhcCCCCCC-EEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCch-hHHHHH
Confidence 5689999988899999999 99999998888 0 3456677777666 677777
Q ss_pred hhhhccCC-CCcc---cc-----------eeeeeeeeeecCCCC-CcchhcHHHHHhcCeeeeeeeecccc-----chHH
Q 039288 54 KRSVRFFP-TCHQ---TA-----------ALRFCEMTSQYNLDL-PENVHNLMFVVFGRSRMQGFIVFDYS-----SVYP 112 (138)
Q Consensus 54 ~~~~~~t~-~gvd---d~-----------~~~~~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 112 (138)
++ ..+ +++| +. .+...|.+...+... ...+.++..++.+++++.++...... ....
T Consensus 201 ~~---~~~~~~~d~~i~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (325)
T TIGR02824 201 KA---ETGGKGVDVILDIVGGSYLNRNIKALALDGRIVQIGFQGGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAA 277 (325)
T ss_pred HH---HcCCCCeEEEEECCchHHHHHHHHhhccCcEEEEEecCCCCcCCCChHHHHhcCCEEEEEehhhcchhhhHHHHH
Confidence 77 554 5777 21 122223332221100 00122333445789998887654321 1244
Q ss_pred HHHHHHHHHHHhCCceec
Q 039288 113 EFLEMILPYIREKARLSM 130 (138)
Q Consensus 113 ~~~~~~~~~~~~g~l~~~ 130 (138)
+.+.+++++++++++++.
T Consensus 278 ~~~~~~~~~~~~~~l~~~ 295 (325)
T TIGR02824 278 ELREHVWPLLASGRVRPV 295 (325)
T ss_pred HHHHHHHHHHHCCcccCc
Confidence 567788899999988654
No 58
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=98.45 E-value=3.1e-06 Score=62.47 Aligned_cols=119 Identities=23% Similarity=0.217 Sum_probs=78.2
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce----------------------------eecCCceEeecCccccHHHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV----------------------------YRSGFDDAFNYKEELDLNATL 53 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv----------------------------~~lGad~vi~~~~~~~~~~~v 53 (138)
++.|||+++.+.+.+.+|+ +|+|+|++|++ .++|+++++++... ++.+++
T Consensus 123 ~~~~a~~~~~~~~~~~~~~-~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~ 200 (323)
T cd05276 123 VFFTAWQNLFQLGGLKAGE-TVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEACRALGADVAINYRTE-DFAEEV 200 (323)
T ss_pred HHHHHHHHHHHhcCCCCCC-EEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCEEEeCCch-hHHHHH
Confidence 4688999998888999999 99999998877 03566778887776 777777
Q ss_pred hhhhccC-CCCcc---cc-----------------eeeeeeeeeecCCCCCcchhcHHHHHhcCeeeeeeeeccc-----
Q 039288 54 KRSVRFF-PTCHQ---TA-----------------ALRFCEMTSQYNLDLPENVHNLMFVVFGRSRMQGFIVFDY----- 107 (138)
Q Consensus 54 ~~~~~~t-~~gvd---d~-----------------~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 107 (138)
.+ .+ ++++| +. +++.+|..... . ...++..++.+++++.+......
T Consensus 201 ~~---~~~~~~~d~vi~~~g~~~~~~~~~~~~~~g~~i~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (323)
T cd05276 201 KE---ATGGRGVDVILDMVGGDYLARNLRALAPDGRLVLIGLLGGA----K-AELDLAPLLRKRLTLTGSTLRSRSLEEK 272 (323)
T ss_pred HH---HhCCCCeEEEEECCchHHHHHHHHhhccCCEEEEEecCCCC----C-CCCchHHHHHhCCeEEEeeccchhhhcc
Confidence 77 55 35677 21 33333332211 1 12233344568888887654332
Q ss_pred cchHHHHHHHHHHHHHhCCceec
Q 039288 108 SSVYPEFLEMILPYIREKARLSM 130 (138)
Q Consensus 108 ~~~~~~~~~~~~~~~~~g~l~~~ 130 (138)
+......+.++++++.++++++.
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~ 295 (323)
T cd05276 273 AALAAAFREHVWPLFASGRIRPV 295 (323)
T ss_pred HHHHHHHHHHHHHHHHCCCccCC
Confidence 12344567788889999988654
No 59
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=98.44 E-value=2.4e-06 Score=64.58 Aligned_cols=116 Identities=15% Similarity=-0.014 Sum_probs=75.8
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce-----------------------------eecCCceEeecCccccHHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV-----------------------------YRSGFDDAFNYKEELDLNAT 52 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv-----------------------------~~lGad~vi~~~~~~~~~~~ 52 (138)
+++|||+++...+++++|+ +|||.|+ |++ .++|+|+++++++. ++.+.
T Consensus 150 ~~~ta~~~~~~~~~~~~g~-~vlI~g~-g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~-~~~~~ 226 (345)
T cd08286 150 ILPTGYECGVLNGKVKPGD-TVAIVGA-GPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAKG-DAIEQ 226 (345)
T ss_pred hhHHHHHHHHhhcCCCCCC-EEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceeccccc-cHHHH
Confidence 5689999888888999999 9999875 777 04688999999887 78888
Q ss_pred HhhhhccCC-CCcc---cc------------eeeeeeeeeecCCCCCcchhcHHHHHhcCeeeeeeeeccccchHHHHHH
Q 039288 53 LKRSVRFFP-TCHQ---TA------------ALRFCEMTSQYNLDLPENVHNLMFVVFGRSRMQGFIVFDYSSVYPEFLE 116 (138)
Q Consensus 53 v~~~~~~t~-~gvd---d~------------~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (138)
+.+ .++ +++| |. .+...|.+..++......+.++..++.+++++.+.... .+.+.
T Consensus 227 i~~---~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 297 (345)
T cd08286 227 VLE---LTDGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGKPVDLHLEKLWIKNITITTGLVD------TNTTP 297 (345)
T ss_pred HHH---HhCCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCCCCCcCHHHHhhcCcEEEeecCc------hhhHH
Confidence 887 553 5777 21 12233443333211111223444456688888764221 13567
Q ss_pred HHHHHHHhCCcee
Q 039288 117 MILPYIREKARLS 129 (138)
Q Consensus 117 ~~~~~~~~g~l~~ 129 (138)
++++++++|.+++
T Consensus 298 ~~~~~~~~~~l~~ 310 (345)
T cd08286 298 MLLKLVSSGKLDP 310 (345)
T ss_pred HHHHHHHcCCCCh
Confidence 7888888888764
No 60
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=98.44 E-value=2.6e-06 Score=66.02 Aligned_cols=120 Identities=13% Similarity=0.062 Sum_probs=72.6
Q ss_pred chHhHHHHHHh--hcCCCCCCeEEEEecCCcce----------------------------eecCCceEeecCcc-----
Q 039288 2 PGLTAYANLFE--NFSPKMGEEYVFISAAFSSV----------------------------YRSGFDDAFNYKEE----- 46 (138)
Q Consensus 2 ~~~TA~~~L~~--~~~~~~g~~~VLI~gaaggv----------------------------~~lGad~vi~~~~~----- 46 (138)
+++|||+++.. .+++++|+ +|||+|++|++ .++|+++++|++++
T Consensus 171 ~~~ta~~al~~~~~~~~~~g~-~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~ 249 (398)
T TIGR01751 171 TGATAYRQLVGWNPATVKPGD-NVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCRELGAEAVIDRNDFGHWGR 249 (398)
T ss_pred hHHHHHHHHhhhhccCCCCCC-EEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCCEEecCCCcchhhc
Confidence 57899999865 57889999 99999998888 15788999987542
Q ss_pred ----------------ccHHHHHhhhhccCC-CCcc---cc-----------eeeeeeeeeecCCCC-CcchhcHHHHHh
Q 039288 47 ----------------LDLNATLKRSVRFFP-TCHQ---TA-----------ALRFCEMTSQYNLDL-PENVHNLMFVVF 94 (138)
Q Consensus 47 ----------------~~~~~~v~~~~~~t~-~gvd---d~-----------~~~~~G~~~~~~~~~-~~~~~~~~~~~~ 94 (138)
..+.+++.+ .++ +|+| |. .+...|.+...+... .....++..+..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~g~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~ 326 (398)
T TIGR01751 250 LPDLNTQAPKEWTKSFKRFGKRIRE---LTGGEDPDIVFEHPGRATFPTSVFVCRRGGMVVICGGTTGYNHDYDNRYLWM 326 (398)
T ss_pred cccccccccchhhhcchhHHHHHHH---HcCCCCceEEEECCcHHHHHHHHHhhccCCEEEEEccccCCCCCcCHHHHhh
Confidence 024556676 664 5788 31 122333333322110 011223344455
Q ss_pred cCeeeeeeeeccccchHHHHHHHHHHHHHhCCceec
Q 039288 95 GRSRMQGFIVFDYSSVYPEFLEMILPYIREKARLSM 130 (138)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~ 130 (138)
++.++.+..... . +.+++++++++++++.+.
T Consensus 327 ~~~~~~~~~~~~----~-~~~~~~~~~l~~~~l~~~ 357 (398)
T TIGR01751 327 RQKRIQGSHFAN----L-REAWEANRLVAKGRIDPT 357 (398)
T ss_pred cccEEEccccCc----H-HHHHHHHHHHHCCCcccc
Confidence 666665543221 2 235678888888888754
No 61
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=98.42 E-value=2.6e-06 Score=64.49 Aligned_cols=118 Identities=17% Similarity=0.093 Sum_probs=75.0
Q ss_pred chHhHHHHHHhhcCC----------CCCCeEEEEecCCcce---------------------------eecCCceEeecC
Q 039288 2 PGLTAYANLFENFSP----------KMGEEYVFISAAFSSV---------------------------YRSGFDDAFNYK 44 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~----------~~g~~~VLI~gaaggv---------------------------~~lGad~vi~~~ 44 (138)
+++|||+++.+..++ ++|+ +|||+|++|++ .++|++++++++
T Consensus 128 ~~~ta~~~l~~~~~~~~~~~~~~~~~~~~-~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~~~~~~~~~~~~g~~~v~~~~ 206 (339)
T cd08249 128 GLVTAALALFQKLGLPLPPPKPSPASKGK-PVLIWGGSSSVGTLAIQLAKLAGYKVITTASPKNFDLVKSLGADAVFDYH 206 (339)
T ss_pred HHHHHHHHHhccccCCCCCCCCCCCCCCC-EEEEEcChhHHHHHHHHHHHHcCCeEEEEECcccHHHHHhcCCCEEEECC
Confidence 578999999877655 7999 99999998877 146889999998
Q ss_pred ccccHHHHHhhhhccCCCCcc---cc------------eeee--eeeeeecCCCCCcchhcHHHHHhcCeeeeeeeecc-
Q 039288 45 EELDLNATLKRSVRFFPTCHQ---TA------------ALRF--CEMTSQYNLDLPENVHNLMFVVFGRSRMQGFIVFD- 106 (138)
Q Consensus 45 ~~~~~~~~v~~~~~~t~~gvd---d~------------~~~~--~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 106 (138)
+. ++.+.+++ .+++++| |. .+.. .|.+...+...... ....+.++..+....
T Consensus 207 ~~-~~~~~l~~---~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~~~------~~~~~~~~~~~~~~~~ 276 (339)
T cd08249 207 DP-DVVEDIRA---ATGGKLRYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPEET------EPRKGVKVKFVLGYTV 276 (339)
T ss_pred Cc-hHHHHHHH---hcCCCeeEEEEeeccchHHHHHHHHHhccCCCEEEEecCCCccc------cCCCCceEEEEEeeee
Confidence 87 88888888 6666787 21 2223 44444432111000 112233333322211
Q ss_pred ------ccchHHHHHHHHHHHHHhCCceec
Q 039288 107 ------YSSVYPEFLEMILPYIREKARLSM 130 (138)
Q Consensus 107 ------~~~~~~~~~~~~~~~~~~g~l~~~ 130 (138)
.+......+++++++++++++.+.
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 306 (339)
T cd08249 277 FGEIPEDREFGEVFWKYLPELLEEGKLKPH 306 (339)
T ss_pred cccccccccchHHHHHHHHHHHHcCCccCC
Confidence 122344677889999999988764
No 62
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=98.37 E-value=3.7e-06 Score=61.74 Aligned_cols=122 Identities=14% Similarity=0.140 Sum_probs=74.8
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce----------------------------eecCCceEeecCccccHHHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV----------------------------YRSGFDDAFNYKEELDLNATL 53 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv----------------------------~~lGad~vi~~~~~~~~~~~v 53 (138)
+++|||+++. ..++++|+ +|+|++++|++ .++|+++++++... ++.+.+
T Consensus 105 ~~~ta~~~l~-~~~~~~g~-~vli~~~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~i 181 (303)
T cd08251 105 VFLTVIDAFA-RAGLAKGE-HILIQTATGGTGLMAVQLARLKGAEIYATASSDDKLEYLKQLGVPHVINYVEE-DFEEEI 181 (303)
T ss_pred HHHHHHHHHH-hcCCCCCC-EEEEecCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCEEEeCCCc-cHHHHH
Confidence 4689999985 78999999 99999998888 14688899998887 888888
Q ss_pred hhhhccCC-CCcc---cc-----------eeeeeeeeeecCCC--CCcchhcHHHHHhcCeeeeeeeeccc----cchHH
Q 039288 54 KRSVRFFP-TCHQ---TA-----------ALRFCEMTSQYNLD--LPENVHNLMFVVFGRSRMQGFIVFDY----SSVYP 112 (138)
Q Consensus 54 ~~~~~~t~-~gvd---d~-----------~~~~~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 112 (138)
.+ .++ +|+| |. .+...|.+..++.. .......+. .+.+++++..+.+... +....
T Consensus 182 ~~---~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (303)
T cd08251 182 MR---LTGGRGVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMTALKSAPSVDLS-VLSNNQSFHSVDLRKLLLLDPEFIA 257 (303)
T ss_pred HH---HcCCCCceEEEECCcHHHHHHHHHHhccCcEEEEEeccCCCccCccChh-HhhcCceEEEEehHHhhhhCHHHHH
Confidence 88 664 5787 21 12222332222110 000011111 2334444444332211 22345
Q ss_pred HHHHHHHHHHHhCCceec
Q 039288 113 EFLEMILPYIREKARLSM 130 (138)
Q Consensus 113 ~~~~~~~~~~~~g~l~~~ 130 (138)
+.+.++++++++|.+++.
T Consensus 258 ~~~~~~~~~~~~g~~~~~ 275 (303)
T cd08251 258 DYQAEMVSLVEEGELRPT 275 (303)
T ss_pred HHHHHHHHHHHCCCccCC
Confidence 677888999999988754
No 63
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=98.37 E-value=5.4e-06 Score=63.41 Aligned_cols=116 Identities=18% Similarity=0.126 Sum_probs=70.8
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce-----------------------------eecCCceEeecCccccHHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV-----------------------------YRSGFDDAFNYKEELDLNAT 52 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv-----------------------------~~lGad~vi~~~~~~~~~~~ 52 (138)
++.|||+++.....+++|+ +|+|+| +|++ .++|+++++++.++ +.
T Consensus 164 ~~~ta~~al~~~~~~~~g~-~vlV~G-~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~----~~ 237 (357)
T PLN02514 164 AGVTVYSPLSHFGLKQSGL-RGGILG-LGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDA----AE 237 (357)
T ss_pred hHHHHHHHHHHcccCCCCC-eEEEEc-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEEecCCCh----HH
Confidence 4689999998777778999 999996 5788 03677777765442 22
Q ss_pred HhhhhccCCCCcc---cc------------eeeeeeeeeecCCCCCcchhcHHHHHhcCeeeeeeeeccccchHHHHHHH
Q 039288 53 LKRSVRFFPTCHQ---TA------------ALRFCEMTSQYNLDLPENVHNLMFVVFGRSRMQGFIVFDYSSVYPEFLEM 117 (138)
Q Consensus 53 v~~~~~~t~~gvd---d~------------~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (138)
+.+ .+ .|+| |. .+...|.+..++......+.+...++.+++++.+.+... ...+.+
T Consensus 238 ~~~---~~-~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~ 308 (357)
T PLN02514 238 MQE---AA-DSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFVTPMLMLGRKVITGSFIGS-----MKETEE 308 (357)
T ss_pred HHH---hc-CCCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCCCCcccHHHHhhCCcEEEEEecCC-----HHHHHH
Confidence 333 22 2455 21 122223333222111112344455677888888875532 235778
Q ss_pred HHHHHHhCCceecee
Q 039288 118 ILPYIREKARLSMRK 132 (138)
Q Consensus 118 ~~~~~~~g~l~~~~~ 132 (138)
+++++++|++++.+.
T Consensus 309 ~~~~~~~g~l~~~i~ 323 (357)
T PLN02514 309 MLEFCKEKGLTSMIE 323 (357)
T ss_pred HHHHHHhCCCcCcEE
Confidence 899999999987653
No 64
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=98.36 E-value=5.4e-06 Score=62.66 Aligned_cols=116 Identities=11% Similarity=-0.002 Sum_probs=76.4
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce-----------------------------eecCCceEeecCccccHHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV-----------------------------YRSGFDDAFNYKEELDLNAT 52 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv-----------------------------~~lGad~vi~~~~~~~~~~~ 52 (138)
.+.|||+++. .+++++|+ +|+|.| +|++ .++|+++++++++. ++.+.
T Consensus 153 ~~~~a~~~~~-~~~~~~g~-~vlI~g-~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~~-~~~~~ 228 (345)
T cd08287 153 VMGTGHHAAV-SAGVRPGS-TVVVVG-DGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVAERGE-EAVAR 228 (345)
T ss_pred HHHHHHHHHH-hcCCCCCC-EEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceEecCCcc-cHHHH
Confidence 3678999885 78999999 999975 6777 14688999999887 88888
Q ss_pred HhhhhccCC-CCcc---cc------------eeeeeeeeeecCCCCCcchhcHHHHHhcCeeeeeeeeccccchHHHHHH
Q 039288 53 LKRSVRFFP-TCHQ---TA------------ALRFCEMTSQYNLDLPENVHNLMFVVFGRSRMQGFIVFDYSSVYPEFLE 116 (138)
Q Consensus 53 v~~~~~~t~-~gvd---d~------------~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (138)
+.+ .++ .|+| |. .+...|.+...+........++...+.+++++.+.. ....+.+.
T Consensus 229 i~~---~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 300 (345)
T cd08287 229 VRE---LTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGGVELDVRELFFRNVGLAGGP-----APVRRYLP 300 (345)
T ss_pred HHH---hcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCCCCccCHHHHHhcceEEEEec-----CCcHHHHH
Confidence 888 664 5788 21 222333333222111111223334567888886532 22345788
Q ss_pred HHHHHHHhCCcee
Q 039288 117 MILPYIREKARLS 129 (138)
Q Consensus 117 ~~~~~~~~g~l~~ 129 (138)
++++++++|++++
T Consensus 301 ~~~~~~~~~~l~~ 313 (345)
T cd08287 301 ELLDDVLAGRINP 313 (345)
T ss_pred HHHHHHHcCCCCH
Confidence 8999999999875
No 65
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=98.35 E-value=4.1e-06 Score=64.65 Aligned_cols=118 Identities=14% Similarity=0.070 Sum_probs=72.3
Q ss_pred chHhHHHHHHhh-cCCCCCCeEEEEecCCcce-----------------------------eecCCceEeecCc---ccc
Q 039288 2 PGLTAYANLFEN-FSPKMGEEYVFISAAFSSV-----------------------------YRSGFDDAFNYKE---ELD 48 (138)
Q Consensus 2 ~~~TA~~~L~~~-~~~~~g~~~VLI~gaaggv-----------------------------~~lGad~vi~~~~---~~~ 48 (138)
+++|||++|... +++++|+ +|||+| +|++ .++|+++++++++ . +
T Consensus 186 ~~~ta~~al~~~~~~~~~g~-~VlV~g-~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~-~ 262 (384)
T cd08265 186 PTSVAYNGLFIRGGGFRPGA-YVVVYG-AGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMRDC-L 262 (384)
T ss_pred HHHHHHHHHHhhcCCCCCCC-EEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcccccccc-c
Confidence 568999999766 7899999 999995 5777 0467788888763 3 5
Q ss_pred HHHHHhhhhccCC-CCcc---cc-------------eeeeeeeeeecCCCCCcchhcHHHHHhcCeeeeeeeeccccchH
Q 039288 49 LNATLKRSVRFFP-TCHQ---TA-------------ALRFCEMTSQYNLDLPENVHNLMFVVFGRSRMQGFIVFDYSSVY 111 (138)
Q Consensus 49 ~~~~v~~~~~~t~-~gvd---d~-------------~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (138)
+.+.+++ +++ +|+| |. .+...|.+...+......+.++..+..+..++.+... ...
T Consensus 263 ~~~~v~~---~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~----~~~ 335 (384)
T cd08265 263 SGEKVME---VTKGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTVPLHLEVLQVRRAQIVGAQG----HSG 335 (384)
T ss_pred HHHHHHH---hcCCCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCCCCcccHHHHhhCceEEEEeec----cCC
Confidence 7788888 674 6888 21 1122333332211101111222334445556555432 122
Q ss_pred HHHHHHHHHHHHhCCcee
Q 039288 112 PEFLEMILPYIREKARLS 129 (138)
Q Consensus 112 ~~~~~~~~~~~~~g~l~~ 129 (138)
...+.++++++++|++++
T Consensus 336 ~~~~~~~~~ll~~g~l~~ 353 (384)
T cd08265 336 HGIFPSVIKLMASGKIDM 353 (384)
T ss_pred cchHHHHHHHHHcCCCCh
Confidence 346788899999999875
No 66
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=98.35 E-value=3.5e-06 Score=64.00 Aligned_cols=113 Identities=16% Similarity=0.070 Sum_probs=71.7
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce-----------------------------eecCCceEeecCccccHHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV-----------------------------YRSGFDDAFNYKEELDLNAT 52 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv-----------------------------~~lGad~vi~~~~~~~~~~~ 52 (138)
++.|||+++ +.+++++|+ +|||+| +|++ .++|+++++++++. ++.+.
T Consensus 151 ~~~ta~~~~-~~~~~~~g~-~vlI~g-~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~-~~~~~ 226 (351)
T cd08285 151 MMSTGFHGA-ELANIKLGD-TVAVFG-IGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKNG-DVVEQ 226 (351)
T ss_pred chhhHHHHH-HccCCCCCC-EEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCCCC-CHHHH
Confidence 468999996 678999999 999996 5777 15789999999887 88888
Q ss_pred HhhhhccC-CCCcc---cc------------------eeeeeeeeeecCCCCCcchhc--HHHHHhcCeeeeeeeecccc
Q 039288 53 LKRSVRFF-PTCHQ---TA------------------ALRFCEMTSQYNLDLPENVHN--LMFVVFGRSRMQGFIVFDYS 108 (138)
Q Consensus 53 v~~~~~~t-~~gvd---d~------------------~~~~~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 108 (138)
+.+ .+ ++++| |. +++.+|.... . .....+ ......+..++.+.+..
T Consensus 227 i~~---~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~---~-~~~~~~~~~~~~~~~~~~i~~~~~~--- 296 (351)
T cd08285 227 ILK---LTGGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGE---D-DYLPIPREEWGVGMGHKTINGGLCP--- 296 (351)
T ss_pred HHH---HhCCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCC---C-ceeecChhhhhhhccccEEEEeecC---
Confidence 887 66 45788 21 4444443221 0 000111 11112234444432211
Q ss_pred chHHHHHHHHHHHHHhCCcee
Q 039288 109 SVYPEFLEMILPYIREKARLS 129 (138)
Q Consensus 109 ~~~~~~~~~~~~~~~~g~l~~ 129 (138)
..++.+.++++++++|+|++
T Consensus 297 -~~~~~~~~~~~~~~~g~i~~ 316 (351)
T cd08285 297 -GGRLRMERLASLIEYGRVDP 316 (351)
T ss_pred -CccccHHHHHHHHHcCCCCh
Confidence 12356778899999999987
No 67
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=98.34 E-value=4.3e-06 Score=63.35 Aligned_cols=112 Identities=13% Similarity=0.022 Sum_probs=66.1
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce----------------------------eecCCceEeecCccccH--HH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV----------------------------YRSGFDDAFNYKEELDL--NA 51 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv----------------------------~~lGad~vi~~~~~~~~--~~ 51 (138)
+++|||+++. .+++++|+ +|||+|+ |++ .++|+|+++|+.+. +. .+
T Consensus 150 ~~~ta~~~~~-~~~~~~g~-~VlV~G~-g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~a~~~Ga~~vi~~~~~-~~~~~d 225 (329)
T TIGR02822 150 AGIIGYRALL-RASLPPGG-RLGLYGF-GGSAHLTAQVALAQGATVHVMTRGAAARRLALALGAASAGGAYDT-PPEPLD 225 (329)
T ss_pred cchHHHHHHH-hcCCCCCC-EEEEEcC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHhCCceecccccc-Ccccce
Confidence 4679999986 58999999 9999997 777 16777777775332 10 01
Q ss_pred HHhhhhccCCCC--cccc--------eeeeeeeeeecCCCCCcchhcHHHHHhcCeeeeeeeeccccchHHHHHHHHHHH
Q 039288 52 TLKRSVRFFPTC--HQTA--------ALRFCEMTSQYNLDLPENVHNLMFVVFGRSRMQGFIVFDYSSVYPEFLEMILPY 121 (138)
Q Consensus 52 ~v~~~~~~t~~g--vdd~--------~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (138)
.+.. .++.+ +++. +++.+|.... ...+.++..++.+++++.+.+.. .++.+.+++++
T Consensus 226 ~~i~---~~~~~~~~~~~~~~l~~~G~~v~~G~~~~-----~~~~~~~~~~~~~~~~i~g~~~~-----~~~~~~~~~~l 292 (329)
T TIGR02822 226 AAIL---FAPAGGLVPPALEALDRGGVLAVAGIHLT-----DTPPLNYQRHLFYERQIRSVTSN-----TRADAREFLEL 292 (329)
T ss_pred EEEE---CCCcHHHHHHHHHhhCCCcEEEEEeccCc-----cCCCCCHHHHhhCCcEEEEeecC-----CHHHHHHHHHH
Confidence 0111 11111 1111 5555554211 11123445566788888776432 23456778899
Q ss_pred HHhCCceec
Q 039288 122 IREKARLSM 130 (138)
Q Consensus 122 ~~~g~l~~~ 130 (138)
+++|++++.
T Consensus 293 ~~~g~i~~i 301 (329)
T TIGR02822 293 AAQHGVRVT 301 (329)
T ss_pred HHhCCCeeE
Confidence 999999853
No 68
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=98.34 E-value=9.2e-06 Score=60.01 Aligned_cols=124 Identities=16% Similarity=0.135 Sum_probs=78.9
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce----------------------------eecCCceEeecCccccHHHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV----------------------------YRSGFDDAFNYKEELDLNATL 53 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv----------------------------~~lGad~vi~~~~~~~~~~~v 53 (138)
++.|||+++.....+++|+ +|+|+|++|++ .++|++.++++... ++.+.+
T Consensus 123 ~~~~a~~~~~~~~~~~~~~-~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~i 200 (323)
T cd08241 123 TYGTAYHALVRRARLQPGE-TVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALARALGADHVIDYRDP-DLRERV 200 (323)
T ss_pred HHHHHHHHHHHhcCCCCCC-EEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHHHHcCCceeeecCCc-cHHHHH
Confidence 5678999988888999999 99999998877 03577778888777 788888
Q ss_pred hhhhccCC-CCcc---cc-----------eeeeeeeeeecCCC-CCcchhcHHHHHhcCeeeeeeeecccc----chHHH
Q 039288 54 KRSVRFFP-TCHQ---TA-----------ALRFCEMTSQYNLD-LPENVHNLMFVVFGRSRMQGFIVFDYS----SVYPE 113 (138)
Q Consensus 54 ~~~~~~t~-~gvd---d~-----------~~~~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 113 (138)
.+ .++ +++| +. .+...|.+...+.. ......+......+++++.++....+. ....+
T Consensus 201 ~~---~~~~~~~d~v~~~~g~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (323)
T cd08241 201 KA---LTGGRGVDVVYDPVGGDVFEASLRSLAWGGRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYARREPELLRA 277 (323)
T ss_pred HH---HcCCCCcEEEEECccHHHHHHHHHhhccCCEEEEEccCCCCcCcCCHHHHhhcCcEEEEEecccccchhHHHHHH
Confidence 87 664 5787 21 12223332222110 011101122345578888876554432 12446
Q ss_pred HHHHHHHHHHhCCceec
Q 039288 114 FLEMILPYIREKARLSM 130 (138)
Q Consensus 114 ~~~~~~~~~~~g~l~~~ 130 (138)
.++++++++.++.+++.
T Consensus 278 ~~~~~~~~~~~~~~~~~ 294 (323)
T cd08241 278 NLAELFDLLAEGKIRPH 294 (323)
T ss_pred HHHHHHHHHHCCCcccc
Confidence 77889999999988654
No 69
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=98.34 E-value=6.4e-06 Score=62.96 Aligned_cols=120 Identities=13% Similarity=0.055 Sum_probs=77.5
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce-----------------------------eecCCceEeecCccccHHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV-----------------------------YRSGFDDAFNYKEELDLNAT 52 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv-----------------------------~~lGad~vi~~~~~~~~~~~ 52 (138)
+.+|||+++.+.+++++|+ +||||| +|++ .++|++++++++.. ++..+
T Consensus 166 ~~~ta~~~~~~~~~~~~g~-~vLI~g-~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~~~-~~~~~ 242 (363)
T cd08279 166 GVTTGVGAVVNTARVRPGD-TVAVIG-CGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASED-DAVEA 242 (363)
T ss_pred hhHHHHHHHHhccCCCCCC-EEEEEC-CCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCCCc-cHHHH
Confidence 4689999998889999999 999995 5776 04677888888877 78888
Q ss_pred HhhhhccC-CCCcc---cc------------eeeeeeeeeecCCC--CCcchhcHHHHHhcCeeeeeeeeccccchHHHH
Q 039288 53 LKRSVRFF-PTCHQ---TA------------ALRFCEMTSQYNLD--LPENVHNLMFVVFGRSRMQGFIVFDYSSVYPEF 114 (138)
Q Consensus 53 v~~~~~~t-~~gvd---d~------------~~~~~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (138)
+.+ .+ ++++| |. .+...|.+..++.. ......+...+..++.++.+.+... ....+.
T Consensus 243 l~~---~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 317 (363)
T cd08279 243 VRD---LTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGS--ANPRRD 317 (363)
T ss_pred HHH---HcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecC--cCcHHH
Confidence 887 66 45787 21 12233333322111 0111233334445666666654422 134567
Q ss_pred HHHHHHHHHhCCcee
Q 039288 115 LEMILPYIREKARLS 129 (138)
Q Consensus 115 ~~~~~~~~~~g~l~~ 129 (138)
++++++++++|++++
T Consensus 318 ~~~~~~l~~~g~l~~ 332 (363)
T cd08279 318 IPRLLDLYRAGRLKL 332 (363)
T ss_pred HHHHHHHHHcCCCCc
Confidence 888999999999875
No 70
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=98.33 E-value=5.8e-06 Score=63.37 Aligned_cols=120 Identities=11% Similarity=0.048 Sum_probs=75.9
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce-----------------------------eecCCceEeecCccc-cHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV-----------------------------YRSGFDDAFNYKEEL-DLNA 51 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv-----------------------------~~lGad~vi~~~~~~-~~~~ 51 (138)
++.|||+++.+.+++++|+ +|||+| +|++ .++|+++++++++.. ++.+
T Consensus 167 ~~~ta~~al~~~~~~~~g~-~vlI~g-~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~ 244 (365)
T cd05279 167 GFSTGYGAAVNTAKVTPGS-TCAVFG-LGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRDQDKPIVE 244 (365)
T ss_pred chhHHHHHHHhccCCCCCC-EEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeecccccccchHHH
Confidence 5789999998889999999 999996 5777 156888888876530 3667
Q ss_pred HHhhhhccCCCCcc---cc------------eee-eeeeeeecCCCC--CcchhcHHHHHhcCeeeeeeeeccccchHHH
Q 039288 52 TLKRSVRFFPTCHQ---TA------------ALR-FCEMTSQYNLDL--PENVHNLMFVVFGRSRMQGFIVFDYSSVYPE 113 (138)
Q Consensus 52 ~v~~~~~~t~~gvd---d~------------~~~-~~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (138)
.+++ .+++++| |. .+. ..|.+...+... .....+...+ .++.++.+.+...+ ...+
T Consensus 245 ~l~~---~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~~~~--~~~~ 318 (365)
T cd05279 245 VLTE---MTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDL-LTGRTIKGTVFGGW--KSKD 318 (365)
T ss_pred HHHH---HhCCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCceeeCHHHH-hcCCeEEEEeccCC--chHh
Confidence 7777 6666787 21 233 444443332111 1112333334 56666766544332 2345
Q ss_pred HHHHHHHHHHhCCcee
Q 039288 114 FLEMILPYIREKARLS 129 (138)
Q Consensus 114 ~~~~~~~~~~~g~l~~ 129 (138)
.+.+++++++++++++
T Consensus 319 ~~~~~~~l~~~~~l~~ 334 (365)
T cd05279 319 SVPKLVALYRQKKFPL 334 (365)
T ss_pred HHHHHHHHHHcCCcch
Confidence 6778888999998864
No 71
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=98.32 E-value=2.8e-06 Score=66.20 Aligned_cols=108 Identities=14% Similarity=0.023 Sum_probs=68.2
Q ss_pred hhcCCCCCCeEEEEecCCcce-------------------------------eec--------CCc-eEeecCc-cccHH
Q 039288 12 ENFSPKMGEEYVFISAAFSSV-------------------------------YRS--------GFD-DAFNYKE-ELDLN 50 (138)
Q Consensus 12 ~~~~~~~g~~~VLI~gaaggv-------------------------------~~l--------Gad-~vi~~~~-~~~~~ 50 (138)
+.+++++|+ +|+|+|++|++ .++ |++ +++|+++ + ++.
T Consensus 169 ~~~~~~~g~-~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~~~-~~~ 246 (410)
T cd08238 169 HRMGIKPGG-NTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYVNPATID-DLH 246 (410)
T ss_pred hhcCCCCCC-EEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEECCCccc-cHH
Confidence 567899999 99999988877 032 565 5677764 5 688
Q ss_pred HHHhhhhccCC-CCcc---cc------------eeeeeeeeeec-CCC--CCcchhcHHHHHhcCeeeeeeeeccccchH
Q 039288 51 ATLKRSVRFFP-TCHQ---TA------------ALRFCEMTSQY-NLD--LPENVHNLMFVVFGRSRMQGFIVFDYSSVY 111 (138)
Q Consensus 51 ~~v~~~~~~t~-~gvd---d~------------~~~~~G~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (138)
+.+++ +++ +|+| |. .+...|.+..+ +.. ....++++..+..+++++.+.... .
T Consensus 247 ~~v~~---~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~-----~ 318 (410)
T cd08238 247 ATLME---LTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKNFSAPLNFYNVHYNNTHYVGTSGG-----N 318 (410)
T ss_pred HHHHH---HhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCCccccccHHHhhhcCcEEEEeCCC-----C
Confidence 88888 774 5787 21 11122222211 100 011234555677788988875432 2
Q ss_pred HHHHHHHHHHHHhCCcee
Q 039288 112 PEFLEMILPYIREKARLS 129 (138)
Q Consensus 112 ~~~~~~~~~~~~~g~l~~ 129 (138)
+..++++++++++|++++
T Consensus 319 ~~~~~~~~~li~~g~i~~ 336 (410)
T cd08238 319 TDDMKEAIDLMAAGKLNP 336 (410)
T ss_pred HHHHHHHHHHHHcCCCch
Confidence 345778999999999987
No 72
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=98.32 E-value=9.1e-06 Score=61.23 Aligned_cols=116 Identities=14% Similarity=0.010 Sum_probs=72.4
Q ss_pred chHhHHHHHHhh-cCCCCCCeEEEEecCCcce-----------------------------eecCCceEeecCccccHHH
Q 039288 2 PGLTAYANLFEN-FSPKMGEEYVFISAAFSSV-----------------------------YRSGFDDAFNYKEELDLNA 51 (138)
Q Consensus 2 ~~~TA~~~L~~~-~~~~~g~~~VLI~gaaggv-----------------------------~~lGad~vi~~~~~~~~~~ 51 (138)
.++|||++|... ..+.+|+ +|||+|+ |++ .++|+++++++++ ++.+
T Consensus 150 ~~~ta~~~l~~~~~~~~~~~-~vlI~g~-~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~ 225 (340)
T cd05284 150 AGLTAYHAVKKALPYLDPGS-TVVVIGV-GGLGHIAVQILRALTPATVIAVDRSEEALKLAERLGADHVLNASD--DVVE 225 (340)
T ss_pred hHHHHHHHHHHhcccCCCCC-EEEEEcC-cHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHhCCcEEEcCCc--cHHH
Confidence 478999999876 5788999 9999995 457 1457788888765 3677
Q ss_pred HHhhhhccCC-CCcc---cc------------eeeeeeeeeecCCCCCcchhcHHHHHhcCeeeeeeeeccccchHHHHH
Q 039288 52 TLKRSVRFFP-TCHQ---TA------------ALRFCEMTSQYNLDLPENVHNLMFVVFGRSRMQGFIVFDYSSVYPEFL 115 (138)
Q Consensus 52 ~v~~~~~~t~-~gvd---d~------------~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (138)
++++ .++ .++| |. .+...|.+..++.... .+.+....+.+++++.+.... ..+.+
T Consensus 226 ~i~~---~~~~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~-~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 296 (340)
T cd05284 226 EVRE---LTGGRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH-GRLPTSDLVPTEISVIGSLWG-----TRAEL 296 (340)
T ss_pred HHHH---HhCCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC-CccCHHHhhhcceEEEEEecc-----cHHHH
Confidence 7777 664 5787 21 1223333332211100 112223335688888775432 23466
Q ss_pred HHHHHHHHhCCceec
Q 039288 116 EMILPYIREKARLSM 130 (138)
Q Consensus 116 ~~~~~~~~~g~l~~~ 130 (138)
.++++++++|.+++.
T Consensus 297 ~~~~~~l~~g~l~~~ 311 (340)
T cd05284 297 VEVVALAESGKVKVE 311 (340)
T ss_pred HHHHHHHHhCCCCcc
Confidence 788899999988753
No 73
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=98.32 E-value=5.2e-06 Score=60.27 Aligned_cols=120 Identities=16% Similarity=0.128 Sum_probs=75.0
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce----------------------------eecC--CceEeecCccccHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV----------------------------YRSG--FDDAFNYKEELDLNA 51 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv----------------------------~~lG--ad~vi~~~~~~~~~~ 51 (138)
++.|||+++.+..++++|+ +|+|+|++|++ ..+| ++++++++.. ++.+
T Consensus 92 ~~~~a~~~~~~~~~~~~g~-~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 169 (293)
T cd05195 92 AYLTAYYALVDLARLQKGE-SVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLRELGGPVDHIFSSRDL-SFAD 169 (293)
T ss_pred HHHHHHHHHHHHhccCCCC-EEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhCCCcceEeecCch-hHHH
Confidence 4679999998889999999 99999988888 0334 6788888777 7888
Q ss_pred HHhhhhccC-CCCcc---cc-----------------eeeeeeeeeecCCCCCcchhcHHHHHhcCeeeeeeeeccc---
Q 039288 52 TLKRSVRFF-PTCHQ---TA-----------------ALRFCEMTSQYNLDLPENVHNLMFVVFGRSRMQGFIVFDY--- 107 (138)
Q Consensus 52 ~v~~~~~~t-~~gvd---d~-----------------~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 107 (138)
++++ .+ ++++| +. +++.+|.....+. ....+ ..+.+++++..+.+...
T Consensus 170 ~~~~---~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~ 241 (293)
T cd05195 170 GILR---ATGGRGVDVVLNSLSGELLRASWRCLAPFGRFVEIGKRDILSN----SKLGM-RPFLRNVSFSSVDLDQLARE 241 (293)
T ss_pred HHHH---HhCCCCceEEEeCCCchHHHHHHHhcccCceEEEeeccccccC----Cccch-hhhccCCeEEEEeHHHHhhh
Confidence 8888 66 45777 21 3333332211100 01111 12334555555433221
Q ss_pred -cchHHHHHHHHHHHHHhCCceece
Q 039288 108 -SSVYPEFLEMILPYIREKARLSMR 131 (138)
Q Consensus 108 -~~~~~~~~~~~~~~~~~g~l~~~~ 131 (138)
+....+.+.+++++++++++++..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (293)
T cd05195 242 RPELLRELLREVLELLEAGVLKPLP 266 (293)
T ss_pred ChHHHHHHHHHHHHHHHCCCcccCC
Confidence 223455778899999999887543
No 74
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=98.31 E-value=6.2e-06 Score=62.86 Aligned_cols=113 Identities=15% Similarity=0.059 Sum_probs=68.2
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce-----------------------------eecCCceEeecCccccH---
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV-----------------------------YRSGFDDAFNYKEELDL--- 49 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv-----------------------------~~lGad~vi~~~~~~~~--- 49 (138)
+++|||+++.+...+++|+ +|||+| +|++ .++|+++++++++. ++
T Consensus 161 ~~~ta~~al~~~~~~~~g~-~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~-~~~~~ 237 (361)
T cd08231 161 ALATVLAALDRAGPVGAGD-TVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDIDEL-PDPQR 237 (361)
T ss_pred HHHHHHHHHHhccCCCCCC-EEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEEcCccc-ccHHH
Confidence 5789999998888778999 999997 5787 14678888888764 33
Q ss_pred HHHHhhhhccCC-CCcc---cc------------eeeeeeeeeecCCC--CCcchhcHHHHHhcCeeeeeeeeccccchH
Q 039288 50 NATLKRSVRFFP-TCHQ---TA------------ALRFCEMTSQYNLD--LPENVHNLMFVVFGRSRMQGFIVFDYSSVY 111 (138)
Q Consensus 50 ~~~v~~~~~~t~-~gvd---d~------------~~~~~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (138)
...+++ .++ +|+| |. .+...|.+..++.. ......+...++.+++++.+++...
T Consensus 238 ~~~i~~---~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 309 (361)
T cd08231 238 RAIVRD---ITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYD----- 309 (361)
T ss_pred HHHHHH---HhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHHHhhcccEEEEcccCC-----
Confidence 356777 664 6788 21 12222333222111 0111122234567888888775432
Q ss_pred HHHHHHHHHHHHhC
Q 039288 112 PEFLEMILPYIREK 125 (138)
Q Consensus 112 ~~~~~~~~~~~~~g 125 (138)
++.+.++++++.++
T Consensus 310 ~~~~~~~~~~~~~~ 323 (361)
T cd08231 310 PSHLYRAVRFLERT 323 (361)
T ss_pred chhHHHHHHHHHhc
Confidence 22345566666665
No 75
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=98.31 E-value=1.7e-05 Score=59.20 Aligned_cols=124 Identities=19% Similarity=0.211 Sum_probs=80.0
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce----------e------------------ecCCceEeecCccccHHHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV----------Y------------------RSGFDDAFNYKEELDLNATL 53 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv----------~------------------~lGad~vi~~~~~~~~~~~v 53 (138)
+..|||+++...+++++|+ +|+|+|++|++ . ++|++++++++.. ++.+.+
T Consensus 122 ~~~~a~~~~~~~~~~~~~~-~vli~g~~g~~g~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~ 199 (337)
T cd08275 122 NYLTAYYALFELGNLRPGQ-SVLVHSAAGGVGLAAGQLCKTVPNVTVVGTASASKHEALKENGVTHVIDYRTQ-DYVEEV 199 (337)
T ss_pred HHHHHHHHHHHhhCCCCCC-EEEEEcCcchHHHHHHHHHHHccCcEEEEeCCHHHHHHHHHcCCcEEeeCCCC-cHHHHH
Confidence 5689999998899999999 99999997777 0 2366778888777 788888
Q ss_pred hhhhccCCCCcc---cc-----------------eeeeeeeeeecCCC-CC----------cchhcHHHHHhcCeeeeee
Q 039288 54 KRSVRFFPTCHQ---TA-----------------ALRFCEMTSQYNLD-LP----------ENVHNLMFVVFGRSRMQGF 102 (138)
Q Consensus 54 ~~~~~~t~~gvd---d~-----------------~~~~~G~~~~~~~~-~~----------~~~~~~~~~~~~~~~~~~~ 102 (138)
++ .+++++| +. +++.+|.....+.. .. ........++.+++++.++
T Consensus 200 ~~---~~~~~~d~v~~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (337)
T cd08275 200 KK---ISPEGVDIVLDALGGEDTRKSYDLLKPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGF 276 (337)
T ss_pred HH---HhCCCceEEEECCcHHHHHHHHHhhccCcEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEe
Confidence 87 6555677 21 45555443221110 00 0011123456678888877
Q ss_pred eecccc---chHHHHHHHHHHHHHhCCceec
Q 039288 103 IVFDYS---SVYPEFLEMILPYIREKARLSM 130 (138)
Q Consensus 103 ~~~~~~---~~~~~~~~~~~~~~~~g~l~~~ 130 (138)
...... ......+.++++++.++.+++.
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (337)
T cd08275 277 NLGWLFEERELLTEVMDKLLKLYEEGKIKPK 307 (337)
T ss_pred echhhhhChHHHHHHHHHHHHHHHCCCCCCc
Confidence 543221 1234567888899999988765
No 76
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=98.29 E-value=6.1e-06 Score=62.64 Aligned_cols=115 Identities=13% Similarity=0.053 Sum_probs=71.6
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce-----------------------------eecCCceEeecCccccHHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV-----------------------------YRSGFDDAFNYKEELDLNAT 52 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv-----------------------------~~lGad~vi~~~~~~~~~~~ 52 (138)
+.+|||+++ +.+++++|+ +||| +++|++ .++|+++++++++. ++.+.
T Consensus 159 ~~~ta~~a~-~~~~~~~g~-~vlI-~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~~ 234 (350)
T cd08256 159 PLACALHAV-DRANIKFDD-VVVL-AGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVLNPPEV-DVVEK 234 (350)
T ss_pred HHHHHHHHH-HhcCCCCCC-EEEE-ECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHcCCcEEecCCCc-CHHHH
Confidence 578999998 788999999 9999 455777 04688899998877 78888
Q ss_pred HhhhhccCC-CCcc---cc------------eeeeeeeeeecCCCCCcchhcHHHH-HhcCeeeeeeeeccccchHHHHH
Q 039288 53 LKRSVRFFP-TCHQ---TA------------ALRFCEMTSQYNLDLPENVHNLMFV-VFGRSRMQGFIVFDYSSVYPEFL 115 (138)
Q Consensus 53 v~~~~~~t~-~gvd---d~------------~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 115 (138)
+.+ .++ +|+| |. .+...|.+..++........++..+ ..+++++.+..... ..+
T Consensus 235 ~~~---~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~------~~~ 305 (350)
T cd08256 235 IKE---LTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDPVTVDWSIIGDRKELDVLGSHLGP------YCY 305 (350)
T ss_pred HHH---HhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCCCccChhHhhcccccEEEEeccCc------hhH
Confidence 888 664 5788 21 1222233222211100011122222 23556666554322 256
Q ss_pred HHHHHHHHhCCcee
Q 039288 116 EMILPYIREKARLS 129 (138)
Q Consensus 116 ~~~~~~~~~g~l~~ 129 (138)
.++++++++|.+++
T Consensus 306 ~~~~~~~~~g~l~~ 319 (350)
T cd08256 306 PIAIDLIASGRLPT 319 (350)
T ss_pred HHHHHHHHcCCCCh
Confidence 77888999998876
No 77
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=98.26 E-value=8.4e-06 Score=60.28 Aligned_cols=110 Identities=13% Similarity=0.021 Sum_probs=67.3
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce-----------------------------eecCCceEeecCccccHHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV-----------------------------YRSGFDDAFNYKEELDLNAT 52 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv-----------------------------~~lGad~vi~~~~~~~~~~~ 52 (138)
++.|||+++.+ ....+|+ +|||+|+ |++ .++|+++++++++ ..+.
T Consensus 105 ~~~ta~~al~~-~~~~~g~-~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~---~~~~ 178 (280)
T TIGR03366 105 ATATVMAALEA-AGDLKGR-RVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRRELALSFGATALAEPEV---LAER 178 (280)
T ss_pred HHHHHHHHHHh-ccCCCCC-EEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCcEecCchh---hHHH
Confidence 35789999865 4567999 9999986 778 1567777777643 3455
Q ss_pred HhhhhccC-CCCcc---cc------------eeeeeeeeeecCCC--CCcchhcHHHHHhcCeeeeeeeeccccchHHHH
Q 039288 53 LKRSVRFF-PTCHQ---TA------------ALRFCEMTSQYNLD--LPENVHNLMFVVFGRSRMQGFIVFDYSSVYPEF 114 (138)
Q Consensus 53 v~~~~~~t-~~gvd---d~------------~~~~~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (138)
+++ .+ ++|+| |. .+...|.+..++.. ....+.++..++.+++++.+.... .++.
T Consensus 179 ~~~---~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~~~~~~~i~g~~~~-----~~~~ 250 (280)
T TIGR03366 179 QGG---LQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQVVRRWLTIRGVHNY-----EPRH 250 (280)
T ss_pred HHH---HhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHHHHhCCcEEEecCCC-----CHHH
Confidence 666 55 35788 21 12223333322211 111234456677899999886432 2345
Q ss_pred HHHHHHHHHhC
Q 039288 115 LEMILPYIREK 125 (138)
Q Consensus 115 ~~~~~~~~~~g 125 (138)
+.++++++.++
T Consensus 251 ~~~~~~~l~~~ 261 (280)
T TIGR03366 251 LDQAVRFLAAN 261 (280)
T ss_pred HHHHHHHHHhh
Confidence 77888888875
No 78
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=98.25 E-value=1.5e-05 Score=60.24 Aligned_cols=119 Identities=14% Similarity=0.073 Sum_probs=74.5
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce--------e---------------------ecCCceEeecCccccHHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV--------Y---------------------RSGFDDAFNYKEELDLNAT 52 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv--------~---------------------~lGad~vi~~~~~~~~~~~ 52 (138)
+++|||++|. ..++++|+ +|||+| +|++ . ++|+++++++++. . .++
T Consensus 144 ~~~ta~~~l~-~~~~~~~~-~vlI~g-~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~~-~-~~~ 218 (343)
T cd08236 144 PAAVALHAVR-LAGITLGD-TVVVIG-AGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKEE-D-VEK 218 (343)
T ss_pred hHHHHHHHHH-hcCCCCCC-EEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCccc-c-HHH
Confidence 5689999986 78899999 999996 4666 0 3466778887776 6 666
Q ss_pred HhhhhccCC-CCcc---cc------------eeeeeeeeeecCCC---CCcchhcHHHHHhcCeeeeeeeeccccchHHH
Q 039288 53 LKRSVRFFP-TCHQ---TA------------ALRFCEMTSQYNLD---LPENVHNLMFVVFGRSRMQGFIVFDYSSVYPE 113 (138)
Q Consensus 53 v~~~~~~t~-~gvd---d~------------~~~~~G~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (138)
+++ .++ +++| |. .+...|.+..++.. ......+...++.+++++.++.........++
T Consensus 219 ~~~---~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (343)
T cd08236 219 VRE---LTEGRGADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPFPGD 295 (343)
T ss_pred HHH---HhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeeccccccchh
Confidence 766 553 4677 21 12223333322111 11112233445678888888765433223456
Q ss_pred HHHHHHHHHHhCCce
Q 039288 114 FLEMILPYIREKARL 128 (138)
Q Consensus 114 ~~~~~~~~~~~g~l~ 128 (138)
.++++++++++|++.
T Consensus 296 ~~~~~~~~~~~~~l~ 310 (343)
T cd08236 296 EWRTALDLLASGKIK 310 (343)
T ss_pred hHHHHHHHHHcCCCC
Confidence 678889999999875
No 79
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=98.25 E-value=1.7e-05 Score=58.75 Aligned_cols=119 Identities=24% Similarity=0.186 Sum_probs=77.7
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce----------------------------eecCCceEeecCccccHHHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV----------------------------YRSGFDDAFNYKEELDLNATL 53 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv----------------------------~~lGad~vi~~~~~~~~~~~v 53 (138)
++.|||+++...+.+++++ +|+|+|++|++ .+.|++.+++++.. ++.+.+
T Consensus 128 ~~~~a~~~~~~~~~~~~~~-~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~ 205 (328)
T cd08268 128 QYLTAYGALVELAGLRPGD-SVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDALLALGAAHVIVTDEE-DLVAEV 205 (328)
T ss_pred HHHHHHHHHHHhcCCCCCC-EEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCEEEecCCc-cHHHHH
Confidence 5789999998889999999 99999998888 03467788888776 777777
Q ss_pred hhhhccCC-CCcc---cc-----------------eeeeeeeeeecCCCCCcchhcHHHHHhcCeeeeeeeeccc---cc
Q 039288 54 KRSVRFFP-TCHQ---TA-----------------ALRFCEMTSQYNLDLPENVHNLMFVVFGRSRMQGFIVFDY---SS 109 (138)
Q Consensus 54 ~~~~~~t~-~gvd---d~-----------------~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 109 (138)
.+ .+. +++| +. +++.+|.... .....+....+.+++++.++.+... +.
T Consensus 206 ~~---~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (328)
T cd08268 206 LR---ITGGKGVDVVFDPVGGPQFAKLADALAPGGTLVVYGALSG-----EPTPFPLKAALKKSLTFRGYSLDEITLDPE 277 (328)
T ss_pred HH---HhCCCCceEEEECCchHhHHHHHHhhccCCEEEEEEeCCC-----CCCCCchHHHhhcCCEEEEEecccccCCHH
Confidence 77 553 5677 21 3443433211 1111222334667888877654321 23
Q ss_pred hHHHHHHHHHHHHHhCCceec
Q 039288 110 VYPEFLEMILPYIREKARLSM 130 (138)
Q Consensus 110 ~~~~~~~~~~~~~~~g~l~~~ 130 (138)
.....++.+..++.++.+.+.
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~ 298 (328)
T cd08268 278 ARRRAIAFILDGLASGALKPV 298 (328)
T ss_pred HHHHHHHHHHHHHHCCCCcCC
Confidence 455667777777888877654
No 80
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=98.25 E-value=5.3e-06 Score=62.61 Aligned_cols=117 Identities=17% Similarity=0.042 Sum_probs=72.0
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce-----------------------------eecCCceEeecCccccHHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV-----------------------------YRSGFDDAFNYKEELDLNAT 52 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv-----------------------------~~lGad~vi~~~~~~~~~~~ 52 (138)
+++|||+++ ..+++++|+ +|||+|+ |++ .++|+++++++++. ++.+.
T Consensus 152 ~~~ta~~~~-~~~~~~~~~-~VlI~g~-g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~-~~~~~ 227 (347)
T cd05278 152 ILPTGFHGA-ELAGIKPGS-TVAVIGA-GPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPKNG-DIVEQ 227 (347)
T ss_pred hhhheeehh-hhcCCCCCC-EEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCCcc-hHHHH
Confidence 578999998 678999999 9999764 666 04578889998887 78888
Q ss_pred HhhhhccCC-CCcc---cc------------eeeeeeeeeecCCC-CCcchhcHHHHHhcCeeeeeeeeccccchHHHHH
Q 039288 53 LKRSVRFFP-TCHQ---TA------------ALRFCEMTSQYNLD-LPENVHNLMFVVFGRSRMQGFIVFDYSSVYPEFL 115 (138)
Q Consensus 53 v~~~~~~t~-~gvd---d~------------~~~~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (138)
+++ .++ +++| |. .+...|.+..++.. ...........+.+++++.+.... ..+.+
T Consensus 228 i~~---~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 299 (347)
T cd05278 228 ILE---LTGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVP-----VRARM 299 (347)
T ss_pred HHH---HcCCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCcccCccchhhhceeEEEeeccC-----chhHH
Confidence 887 664 5777 21 12222222222110 010000011123566666653321 14578
Q ss_pred HHHHHHHHhCCceec
Q 039288 116 EMILPYIREKARLSM 130 (138)
Q Consensus 116 ~~~~~~~~~g~l~~~ 130 (138)
+++++++++|++++.
T Consensus 300 ~~~~~~~~~~~l~~~ 314 (347)
T cd05278 300 PELLDLIEEGKIDPS 314 (347)
T ss_pred HHHHHHHHcCCCChh
Confidence 889999999998753
No 81
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=98.24 E-value=1.2e-05 Score=60.68 Aligned_cols=116 Identities=15% Similarity=0.061 Sum_probs=72.8
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce-----------------------------eecCCceEeecCccccHHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV-----------------------------YRSGFDDAFNYKEELDLNAT 52 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv-----------------------------~~lGad~vi~~~~~~~~~~~ 52 (138)
++.|||+++.. .++++|+ +||||| +|++ .++|+++++++++. ++.+.
T Consensus 150 ~~~~a~~~l~~-~~~~~g~-~VlV~g-~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~~~-~~~~~ 225 (343)
T cd08235 150 PLACCINAQRK-AGIKPGD-TVLVIG-AGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAAEE-DLVEK 225 (343)
T ss_pred HHHHHHHHHHh-cCCCCCC-EEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEecCCcc-CHHHH
Confidence 56799999965 5899999 999996 5767 03577888899887 88888
Q ss_pred HhhhhccCC-CCcc---cc------------eeeeeeeeeecCCC--CCcchhcHHHHHhcCeeeeeeeeccccchHHHH
Q 039288 53 LKRSVRFFP-TCHQ---TA------------ALRFCEMTSQYNLD--LPENVHNLMFVVFGRSRMQGFIVFDYSSVYPEF 114 (138)
Q Consensus 53 v~~~~~~t~-~gvd---d~------------~~~~~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (138)
+++ .++ +++| |. .+...|.+..++.. ....+.+......+++++.+.... .++.
T Consensus 226 i~~---~~~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~ 297 (343)
T cd08235 226 VRE---LTDGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGSYAA-----SPED 297 (343)
T ss_pred HHH---HhCCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCcccCHHHHhhCceEEEEEecC-----Chhh
Confidence 887 664 5788 21 12222333222111 011122334455567776654322 2345
Q ss_pred HHHHHHHHHhCCcee
Q 039288 115 LEMILPYIREKARLS 129 (138)
Q Consensus 115 ~~~~~~~~~~g~l~~ 129 (138)
+++++++++++++++
T Consensus 298 ~~~~~~l~~~~~l~~ 312 (343)
T cd08235 298 YKEALELIASGKIDV 312 (343)
T ss_pred HHHHHHHHHcCCCCh
Confidence 777889999998863
No 82
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=98.22 E-value=2e-05 Score=59.10 Aligned_cols=117 Identities=17% Similarity=0.080 Sum_probs=74.2
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce----------------------------eecCCceEeecCccccHHHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV----------------------------YRSGFDDAFNYKEELDLNATL 53 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv----------------------------~~lGad~vi~~~~~~~~~~~v 53 (138)
+++|||+++....++++|+ +|||.| +|++ .++|+++++++++. ++.+.+
T Consensus 149 ~~~ta~~~l~~~~~~~~~~-~vli~g-~g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~~~~g~~~~~~~~~~-~~~~~~ 225 (338)
T cd08254 149 AVLTPYHAVVRAGEVKPGE-TVLVIG-LGGLGLNAVQIAKAMGAAVIAVDIKEEKLELAKELGADEVLNSLDD-SPKDKK 225 (338)
T ss_pred hHHHHHHHHHhccCCCCCC-EEEEEC-CcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCCCc-CHHHHH
Confidence 5789999999888999999 999986 4665 14578888888776 666666
Q ss_pred hhhhccC-CCCcc---cc------------eeeeeeeeeecCCCCCcchhcHHHHHhcCeeeeeeeeccccchHHHHHHH
Q 039288 54 KRSVRFF-PTCHQ---TA------------ALRFCEMTSQYNLDLPENVHNLMFVVFGRSRMQGFIVFDYSSVYPEFLEM 117 (138)
Q Consensus 54 ~~~~~~t-~~gvd---d~------------~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (138)
+ .+ ++++| |. .+...|.+...+........+...++.+++++.+.+.. .++.+.+
T Consensus 226 -~---~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 296 (338)
T cd08254 226 -A---AGLGGGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDKLTVDLSDLIARELRIIGSFGG-----TPEDLPE 296 (338)
T ss_pred -H---HhcCCCceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCCCCccCHHHHhhCccEEEEeccC-----CHHHHHH
Confidence 4 34 45777 21 12233333322211111123344556677777664322 2456778
Q ss_pred HHHHHHhCCceec
Q 039288 118 ILPYIREKARLSM 130 (138)
Q Consensus 118 ~~~~~~~g~l~~~ 130 (138)
+++++++|.|++.
T Consensus 297 ~~~ll~~~~l~~~ 309 (338)
T cd08254 297 VLDLIAKGKLDPQ 309 (338)
T ss_pred HHHHHHcCCCccc
Confidence 8889999988764
No 83
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=98.22 E-value=2.5e-05 Score=58.02 Aligned_cols=59 Identities=27% Similarity=0.474 Sum_probs=47.7
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce---------------e------------ecCCceEeecCccccHHHHHh
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV---------------Y------------RSGFDDAFNYKEELDLNATLK 54 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv---------------~------------~lGad~vi~~~~~~~~~~~v~ 54 (138)
++.|||+++.+.+++++|+ +|+|+|++|++ + +.|++++++.+.. ++.++++
T Consensus 125 ~~~~a~~~~~~~~~~~~g~-~vlI~g~~~~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~ 202 (325)
T cd08271 125 AGLTAYQALFKKLRIEAGR-TILITGGAGGVGSFAVQLAKRAGLRVITTCSKRNFEYVKSLGADHVIDYNDE-DVCERIK 202 (325)
T ss_pred hHHHHHHHHHHhcCCCCCC-EEEEECCccHHHHHHHHHHHHcCCEEEEEEcHHHHHHHHHcCCcEEecCCCc-cHHHHHH
Confidence 5789999999889999999 99999998777 0 3567788887776 7888888
Q ss_pred hhhccC-CCCcc
Q 039288 55 RSVRFF-PTCHQ 65 (138)
Q Consensus 55 ~~~~~t-~~gvd 65 (138)
+ .+ ++|+|
T Consensus 203 ~---~~~~~~~d 211 (325)
T cd08271 203 E---ITGGRGVD 211 (325)
T ss_pred H---HcCCCCCc
Confidence 7 66 46788
No 84
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=98.20 E-value=1.8e-05 Score=59.98 Aligned_cols=114 Identities=12% Similarity=0.126 Sum_probs=70.2
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce-----------------------------eecCCceEeecCccccH---
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV-----------------------------YRSGFDDAFNYKEELDL--- 49 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv-----------------------------~~lGad~vi~~~~~~~~--- 49 (138)
++.|||+++ +.+++++|+ +|||+|+ |++ .++|+++++++++. ++
T Consensus 147 ~~~~a~~~~-~~~~~~~g~-~vlI~g~-g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~-~~~~~ 222 (343)
T cd05285 147 PLSVGVHAC-RRAGVRPGD-TVLVFGA-GPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRTE-DTPES 222 (343)
T ss_pred HHHHHHHHH-HhcCCCCCC-EEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEeccccc-cchhH
Confidence 467899987 789999999 9999864 676 14588899998876 64
Q ss_pred HHHHhhhhccCC-CCcc---cc------------eeeeeeeeeecCCCCCcchhcHHHHHhcCeeeeeeeeccccchHHH
Q 039288 50 NATLKRSVRFFP-TCHQ---TA------------ALRFCEMTSQYNLDLPENVHNLMFVVFGRSRMQGFIVFDYSSVYPE 113 (138)
Q Consensus 50 ~~~v~~~~~~t~-~gvd---d~------------~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (138)
.+.+.+ .++ +++| |. .+...|.+...+........+...+..+++++.++... .+
T Consensus 223 ~~~~~~---~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 293 (343)
T cd05285 223 AEKIAE---LLGGKGPDVVIECTGAESCIQTAIYATRPGGTVVLVGMGKPEVTLPLSAASLREIDIRGVFRY------AN 293 (343)
T ss_pred HHHHHH---HhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHhhCCcEEEEeccC------hH
Confidence 777777 563 5788 21 12222333222111111122233445566766654321 14
Q ss_pred HHHHHHHHHHhCCce
Q 039288 114 FLEMILPYIREKARL 128 (138)
Q Consensus 114 ~~~~~~~~~~~g~l~ 128 (138)
.+.+++++++++++.
T Consensus 294 ~~~~~~~~l~~~~l~ 308 (343)
T cd05285 294 TYPTAIELLASGKVD 308 (343)
T ss_pred HHHHHHHHHHcCCCC
Confidence 567788889888765
No 85
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=98.17 E-value=2.7e-05 Score=58.17 Aligned_cols=116 Identities=10% Similarity=0.045 Sum_probs=69.1
Q ss_pred chHhHHHHHHh--hcCCC-CCCeEEEEecCCcce----------------------------eecCCceEeecCccccHH
Q 039288 2 PGLTAYANLFE--NFSPK-MGEEYVFISAAFSSV----------------------------YRSGFDDAFNYKEELDLN 50 (138)
Q Consensus 2 ~~~TA~~~L~~--~~~~~-~g~~~VLI~gaaggv----------------------------~~lGad~vi~~~~~~~~~ 50 (138)
+++|||+++.. ...++ +|+ +|||||++|++ .++|+++++++++. +.
T Consensus 127 ~~~ta~~~~~~~~~~~~~~~~~-~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~-~~- 203 (324)
T cd08288 127 AGFTAMLCVMALEDHGVTPGDG-PVLVTGAAGGVGSVAVALLARLGYEVVASTGRPEEADYLRSLGASEIIDRAEL-SE- 203 (324)
T ss_pred HHHHHHHHHHHHhhcCcCCCCC-EEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCEEEEcchh-hH-
Confidence 46677766541 23455 689 99999998888 15688888888654 33
Q ss_pred HHHhhhhccCCCC----cc---c-------------ceeeeeeeeeecCCCCCcchhcHHHHHhcCeeeeeeeecccc-c
Q 039288 51 ATLKRSVRFFPTC----HQ---T-------------AALRFCEMTSQYNLDLPENVHNLMFVVFGRSRMQGFIVFDYS-S 109 (138)
Q Consensus 51 ~~v~~~~~~t~~g----vd---d-------------~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 109 (138)
.+++ .++++ +| + .+++.+|.... . + .+.++..++.+++++.++...... .
T Consensus 204 -~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~G~~~~---~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (324)
T cd08288 204 -PGRP---LQKERWAGAVDTVGGHTLANVLAQTRYGGAVAACGLAGG---A-D-LPTTVMPFILRGVTLLGIDSVMAPIE 274 (324)
T ss_pred -hhhh---hccCcccEEEECCcHHHHHHHHHHhcCCCEEEEEEecCC---C-C-CCcchhhhhccccEEEEEEeecccch
Confidence 4444 44333 33 1 14555554321 0 1 112333344688898887543322 2
Q ss_pred hHHHHHHHHHHHHHhCCcee
Q 039288 110 VYPEFLEMILPYIREKARLS 129 (138)
Q Consensus 110 ~~~~~~~~~~~~~~~g~l~~ 129 (138)
...+.+..+.+++.++.+++
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~ 294 (324)
T cd08288 275 RRRAAWARLARDLDPALLEA 294 (324)
T ss_pred hhHHHHHHHHHHHhcCCccc
Confidence 34567778888888887765
No 86
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=98.12 E-value=3.3e-05 Score=57.77 Aligned_cols=58 Identities=16% Similarity=0.127 Sum_probs=40.1
Q ss_pred chHhHHHHHHhhcC---CCCCCeEEEEecCCcce----------------------------eecCCceEeecCccccHH
Q 039288 2 PGLTAYANLFENFS---PKMGEEYVFISAAFSSV----------------------------YRSGFDDAFNYKEELDLN 50 (138)
Q Consensus 2 ~~~TA~~~L~~~~~---~~~g~~~VLI~gaaggv----------------------------~~lGad~vi~~~~~~~~~ 50 (138)
+++|||+++....+ ..+|+ +|||+|++|++ .++|+++++++++. ..
T Consensus 127 ~~~ta~~~l~~~~~~~~~~~~~-~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~--~~ 203 (326)
T cd08289 127 AGFTAALSIHRLEENGLTPEQG-PVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLKKLGAKEVIPREEL--QE 203 (326)
T ss_pred HHHHHHHHHHHHHhcCCCCCCC-EEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHHHcCCCEEEcchhH--HH
Confidence 46789988865433 34589 99999998888 14688888887653 34
Q ss_pred HHHhhhhccCCCCcc
Q 039288 51 ATLKRSVRFFPTCHQ 65 (138)
Q Consensus 51 ~~v~~~~~~t~~gvd 65 (138)
+.+++ .+++++|
T Consensus 204 ~~~~~---~~~~~~d 215 (326)
T cd08289 204 ESIKP---LEKQRWA 215 (326)
T ss_pred HHHHh---hccCCcC
Confidence 55666 5445676
No 87
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=98.12 E-value=3.2e-05 Score=57.20 Aligned_cols=120 Identities=17% Similarity=0.103 Sum_probs=66.5
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce--------eecCCceEeecCccccHHHHHhhhh---------ccCCCCc
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV--------YRSGFDDAFNYKEELDLNATLKRSV---------RFFPTCH 64 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv--------~~lGad~vi~~~~~~~~~~~v~~~~---------~~t~~gv 64 (138)
.++|||+++...... +|+ +|+|+|++|++ ...|+.-+.-..++ +-.+.++++. +.+++++
T Consensus 117 ~~~ta~~~~~~~~~~-~~~-~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~ 193 (305)
T cd08270 117 AGVTALRALRRGGPL-LGR-RVLVTGASGGVGRFAVQLAALAGAHVVAVVGSP-ARAEGLRELGAAEVVVGGSELSGAPV 193 (305)
T ss_pred HHHHHHHHHHHhCCC-CCC-EEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHHcCCcEEEeccccccCCCc
Confidence 468999999877665 599 99999998888 24565422211221 1111111100 0122345
Q ss_pred c---cc-----------------eeeeeeeeeecCCCCCcchhcHHHHHh--cCeeeeeeeeccccchHHHHHHHHHHHH
Q 039288 65 Q---TA-----------------ALRFCEMTSQYNLDLPENVHNLMFVVF--GRSRMQGFIVFDYSSVYPEFLEMILPYI 122 (138)
Q Consensus 65 d---d~-----------------~~~~~G~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (138)
| |. +++.+|.... ...+.++..+.. +++++.++.... +....+.+.++++++
T Consensus 194 d~vl~~~g~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 267 (305)
T cd08270 194 DLVVDSVGGPQLARALELLAPGGTVVSVGSSSG-----EPAVFNPAAFVGGGGGRRLYTFFLYD-GEPLAADLARLLGLV 267 (305)
T ss_pred eEEEECCCcHHHHHHHHHhcCCCEEEEEeccCC-----CcccccHHHHhcccccceEEEEEccC-HHHHHHHHHHHHHHH
Confidence 5 21 4555543221 111222333333 578887776543 234556788899999
Q ss_pred HhCCceec
Q 039288 123 REKARLSM 130 (138)
Q Consensus 123 ~~g~l~~~ 130 (138)
++|++++.
T Consensus 268 ~~~~i~~~ 275 (305)
T cd08270 268 AAGRLDPR 275 (305)
T ss_pred HCCCccce
Confidence 99999865
No 88
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=98.07 E-value=3.6e-05 Score=55.84 Aligned_cols=122 Identities=17% Similarity=0.087 Sum_probs=74.0
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce----------------------------eecCC--ceEeecCccccHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV----------------------------YRSGF--DDAFNYKEELDLNA 51 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv----------------------------~~lGa--d~vi~~~~~~~~~~ 51 (138)
++.|||+++.+.+.+++|+ +|+|+|++|++ .++|+ ++++++++. ++.+
T Consensus 88 ~~~~a~~~~~~~~~~~~g~-~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~ 165 (288)
T smart00829 88 VFLTAYYALVDLARLRPGE-SVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFLRELGIPDDHIFSSRDL-SFAD 165 (288)
T ss_pred HHHHHHHHHHHHhCCCCCC-EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCChhheeeCCCc-cHHH
Confidence 4678999998889999999 99999988888 03566 788888877 7888
Q ss_pred HHhhhhccCC-CCcc---cc-----------eeeeeeeeeecCCCC--CcchhcHHHHHhcCeeeeeeeeccc---cchH
Q 039288 52 TLKRSVRFFP-TCHQ---TA-----------ALRFCEMTSQYNLDL--PENVHNLMFVVFGRSRMQGFIVFDY---SSVY 111 (138)
Q Consensus 52 ~v~~~~~~t~-~gvd---d~-----------~~~~~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 111 (138)
.+.+ .++ +++| |. .+...|.+..++... ...+.++.. +.+++++.++.+... +...
T Consensus 166 ~~~~---~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 241 (288)
T smart00829 166 EILR---ATGGRGVDVVLNSLAGEFLDASLRCLAPGGRFVEIGKRDIRDNSQLGMAP-FRRNVSYHAVDLDALEEGPDRI 241 (288)
T ss_pred HHHH---HhCCCCcEEEEeCCCHHHHHHHHHhccCCcEEEEEcCcCCccccccchhh-hcCCceEEEEEHHHhhcChHHH
Confidence 8887 654 5677 21 122223222221100 001111111 345666665543211 1223
Q ss_pred HHHHHHHHHHHHhCCcee
Q 039288 112 PEFLEMILPYIREKARLS 129 (138)
Q Consensus 112 ~~~~~~~~~~~~~g~l~~ 129 (138)
.+.+.++++++.++++.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~ 259 (288)
T smart00829 242 RELLAEVLELFAEGVLRP 259 (288)
T ss_pred HHHHHHHHHHHHCCCccC
Confidence 456678888998888765
No 89
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=98.07 E-value=4.8e-05 Score=57.41 Aligned_cols=116 Identities=11% Similarity=0.005 Sum_probs=71.4
Q ss_pred CchHhHHHHHHhhcCCCCCCeEEEEecCCcce--------e---------------------ecCCceEeecCccccHHH
Q 039288 1 MPGLTAYANLFENFSPKMGEEYVFISAAFSSV--------Y---------------------RSGFDDAFNYKEELDLNA 51 (138)
Q Consensus 1 ~~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv--------~---------------------~lGad~vi~~~~~~~~~~ 51 (138)
++++|||+++.. +++++|+ +|||+| +|++ . ++|++ +++++.. ++..
T Consensus 151 ~~~~ta~~~~~~-~~~~~~~-~vlI~g-~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~-~~~~ 225 (344)
T cd08284 151 DILPTGYFGAKR-AQVRPGD-TVAVIG-CGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINFEDA-EPVE 225 (344)
T ss_pred CchHHHHhhhHh-cCCccCC-EEEEEC-CcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEecCCc-CHHH
Confidence 367899999964 8899999 999996 6777 1 23443 3566666 7888
Q ss_pred HHhhhhccCC-CCcc---cc------------eeeeeeeeeecCCCC-CcchhcHHHHHhcCeeeeeeeeccccchHHHH
Q 039288 52 TLKRSVRFFP-TCHQ---TA------------ALRFCEMTSQYNLDL-PENVHNLMFVVFGRSRMQGFIVFDYSSVYPEF 114 (138)
Q Consensus 52 ~v~~~~~~t~-~gvd---d~------------~~~~~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (138)
.+.+ .++ +|+| |. .+...|.+..++... ...+.+....+.+++++.... ...++.
T Consensus 226 ~l~~---~~~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 297 (344)
T cd08284 226 RVRE---ATEGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRFGR-----CPVRSL 297 (344)
T ss_pred HHHH---HhCCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcEEEEec-----CCcchh
Confidence 8887 664 5788 21 122333333322111 111122334566777776431 124567
Q ss_pred HHHHHHHHHhCCcee
Q 039288 115 LEMILPYIREKARLS 129 (138)
Q Consensus 115 ~~~~~~~~~~g~l~~ 129 (138)
+.++++++.++++++
T Consensus 298 ~~~~~~~~~~~~i~~ 312 (344)
T cd08284 298 FPELLPLLESGRLDL 312 (344)
T ss_pred HHHHHHHHHcCCCCh
Confidence 788889999998875
No 90
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=98.06 E-value=4.8e-05 Score=58.55 Aligned_cols=59 Identities=12% Similarity=0.072 Sum_probs=45.2
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce-----------------------------eecCCceEeecCccc-cHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV-----------------------------YRSGFDDAFNYKEEL-DLNA 51 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv-----------------------------~~lGad~vi~~~~~~-~~~~ 51 (138)
+++|||+++.+.+++++|+ +|||+| +|++ .++|+++++++.+.. ++.+
T Consensus 174 ~~~ta~~~~~~~~~~~~g~-~VlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~~~~~~~~~~~ 251 (373)
T cd08299 174 GFSTGYGAAVNTAKVTPGS-TCAVFG-LGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINPQDYKKPIQE 251 (373)
T ss_pred chHHHHHHHHhccCCCCCC-EEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEecccccchhHHH
Confidence 5789999988889999999 999996 5777 156888888876530 3677
Q ss_pred HHhhhhccCCCCcc
Q 039288 52 TLKRSVRFFPTCHQ 65 (138)
Q Consensus 52 ~v~~~~~~t~~gvd 65 (138)
.+++ ++++++|
T Consensus 252 ~v~~---~~~~~~d 262 (373)
T cd08299 252 VLTE---MTDGGVD 262 (373)
T ss_pred HHHH---HhCCCCe
Confidence 7777 5555677
No 91
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=98.06 E-value=6e-05 Score=56.86 Aligned_cols=117 Identities=9% Similarity=-0.057 Sum_probs=67.1
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce-----------------------------eecCCceEeecCccccHHH-
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV-----------------------------YRSGFDDAFNYKEELDLNA- 51 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv-----------------------------~~lGad~vi~~~~~~~~~~- 51 (138)
+++|||+++ ..+++++|+ +|||+| +|++ .++|++++++++.+ +..+
T Consensus 146 ~~~~a~~~~-~~~~~~~g~-~VlI~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~-~~~~~ 221 (341)
T cd08262 146 PLAVGLHAV-RRARLTPGE-VALVIG-CGPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAAD-SPFAA 221 (341)
T ss_pred hHHHHHHHH-HhcCCCCCC-EEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEEcCCCc-CHHHH
Confidence 567899985 788999999 999996 4777 04677888888765 4332
Q ss_pred --HHhhhhccC-CCCcc---cc------------eeeeeeeeeecCCCCCcchhcHHHHHhcCeeeeeeeeccccchHHH
Q 039288 52 --TLKRSVRFF-PTCHQ---TA------------ALRFCEMTSQYNLDLPENVHNLMFVVFGRSRMQGFIVFDYSSVYPE 113 (138)
Q Consensus 52 --~v~~~~~~t-~~gvd---d~------------~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (138)
.+.+ .+ ++++| |. .+...|.+...+...............+++++..... ...+
T Consensus 222 ~~~~~~---~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 293 (341)
T cd08262 222 WAAELA---RAGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMESDNIEPALAIRKELTLQFSLG-----YTPE 293 (341)
T ss_pred HHHHHH---HhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCCccCHHHHhhcceEEEEEec-----ccHH
Confidence 2444 33 35677 21 1223333332221100000111112346666654322 1234
Q ss_pred HHHHHHHHHHhCCceec
Q 039288 114 FLEMILPYIREKARLSM 130 (138)
Q Consensus 114 ~~~~~~~~~~~g~l~~~ 130 (138)
.++++++++++|++.+.
T Consensus 294 ~~~~~~~l~~~g~i~~~ 310 (341)
T cd08262 294 EFADALDALAEGKVDVA 310 (341)
T ss_pred HHHHHHHHHHcCCCChH
Confidence 67788899999998753
No 92
>PRK10083 putative oxidoreductase; Provisional
Probab=98.03 E-value=5.9e-05 Score=56.84 Aligned_cols=114 Identities=11% Similarity=-0.003 Sum_probs=64.9
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce------------------------------eecCCceEeecCccccHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV------------------------------YRSGFDDAFNYKEELDLNA 51 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv------------------------------~~lGad~vi~~~~~~~~~~ 51 (138)
+..|||+ +.+.+++++|+ +|||+| +|++ .++|++++++++++ ++.+
T Consensus 145 ~~~~a~~-~~~~~~~~~g~-~vlI~g-~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~-~~~~ 220 (339)
T PRK10083 145 PFTIAAN-VTGRTGPTEQD-VALIYG-AGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQE-PLGE 220 (339)
T ss_pred hHHHHHH-HHHhcCCCCCC-EEEEEC-CCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCccc-cHHH
Confidence 4567775 45678999999 999999 5777 04677888888776 6766
Q ss_pred HHhhhhccCCCCcc---cc------------eeeeeeeeeecCCCCCcchhcHHHHHhcCeeeeeeeeccccchHHHHHH
Q 039288 52 TLKRSVRFFPTCHQ---TA------------ALRFCEMTSQYNLDLPENVHNLMFVVFGRSRMQGFIVFDYSSVYPEFLE 116 (138)
Q Consensus 52 ~v~~~~~~t~~gvd---d~------------~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (138)
.+.. . +.++| |. .+...|.+..++......+.+...+..+++++.+... ..+.++
T Consensus 221 ~~~~---~-g~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 290 (339)
T PRK10083 221 ALEE---K-GIKPTLIIDAACHPSILEEAVTLASPAARIVLMGFSSEPSEIVQQGITGKELSIFSSRL------NANKFP 290 (339)
T ss_pred HHhc---C-CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCceecHHHHhhcceEEEEEec------ChhhHH
Confidence 6643 1 11233 10 1222233322211101111222333446666554321 235678
Q ss_pred HHHHHHHhCCcee
Q 039288 117 MILPYIREKARLS 129 (138)
Q Consensus 117 ~~~~~~~~g~l~~ 129 (138)
++++++++|++++
T Consensus 291 ~~~~~~~~g~l~~ 303 (339)
T PRK10083 291 VVIDWLSKGLIDP 303 (339)
T ss_pred HHHHHHHcCCCCh
Confidence 8899999998876
No 93
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=98.02 E-value=0.0001 Score=54.63 Aligned_cols=120 Identities=16% Similarity=0.176 Sum_probs=73.7
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce--------e-------------------ecCCceEeecCccccHHHHHh
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV--------Y-------------------RSGFDDAFNYKEELDLNATLK 54 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv--------~-------------------~lGad~vi~~~~~~~~~~~v~ 54 (138)
++.|||+++.+.+++++|+ +++|+|++|++ . ++|++.++++.. ++.+.++
T Consensus 128 ~~~~a~~~l~~~~~~~~~~-~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~ 204 (326)
T cd08272 128 VGITAWEGLVDRAAVQAGQ-TVLIHGGAGGVGHVAVQLAKAAGARVYATASSEKAAFARSLGADPIIYYRE--TVVEYVA 204 (326)
T ss_pred HHHHHHHHHHHhcCCCCCC-EEEEEcCCCcHHHHHHHHHHHcCCEEEEEechHHHHHHHHcCCCEEEecch--hHHHHHH
Confidence 4689999998899999999 99999988887 1 245566666543 3666677
Q ss_pred hhhccCC-CCcc---cc-----------eeeeeeeeeecCCCCCcchhcHHHHHhcCeeeeeeeecc------ccchHHH
Q 039288 55 RSVRFFP-TCHQ---TA-----------ALRFCEMTSQYNLDLPENVHNLMFVVFGRSRMQGFIVFD------YSSVYPE 113 (138)
Q Consensus 55 ~~~~~t~-~gvd---d~-----------~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 113 (138)
+ .++ +|+| +. .+...|.+...+.... .++.....+++++.++.... .+....+
T Consensus 205 ~---~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (326)
T cd08272 205 E---HTGGRGFDVVFDTVGGETLDASFEAVALYGRVVSILGGAT---HDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGE 278 (326)
T ss_pred H---hcCCCCCcEEEECCChHHHHHHHHHhccCCEEEEEecCCc---cchhhHhhhcceEEEEEcccccccccchhhHHH
Confidence 7 663 5788 21 2223333332211111 11112235677777655321 1223556
Q ss_pred HHHHHHHHHHhCCceec
Q 039288 114 FLEMILPYIREKARLSM 130 (138)
Q Consensus 114 ~~~~~~~~~~~g~l~~~ 130 (138)
.+.+++++++++.+++.
T Consensus 279 ~~~~~~~~l~~~~l~~~ 295 (326)
T cd08272 279 ILREAARLVERGQLRPL 295 (326)
T ss_pred HHHHHHHHHHCCCcccc
Confidence 78889999999988754
No 94
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=98.02 E-value=6.1e-05 Score=56.17 Aligned_cols=116 Identities=9% Similarity=0.084 Sum_probs=65.7
Q ss_pred chHhHHHHHHhhcCC--C-CCCeEEEEecCCcce----------------------------eecCCceEeecCccccHH
Q 039288 2 PGLTAYANLFENFSP--K-MGEEYVFISAAFSSV----------------------------YRSGFDDAFNYKEELDLN 50 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~--~-~g~~~VLI~gaaggv----------------------------~~lGad~vi~~~~~~~~~ 50 (138)
.++|||++++...+. + .|+ +|||||++|++ .++|+++++++++. .
T Consensus 127 ~~~ta~~~l~~~~~~~~~~~~~-~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~-- 202 (325)
T cd05280 127 AGFTAALSVHRLEDNGQTPEDG-PVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYLKSLGASEVLDREDL-L-- 202 (325)
T ss_pred HHHHHHHHHHHHhhccCCCCCC-EEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEcchhH-H--
Confidence 467899998766544 5 478 99999998888 15678888876542 2
Q ss_pred HHHhhhhccCCCCcc---cc-----------------eeeeeeeeeecCCCCCcchhcHHHHHhcCeeeeeeeecccc-c
Q 039288 51 ATLKRSVRFFPTCHQ---TA-----------------ALRFCEMTSQYNLDLPENVHNLMFVVFGRSRMQGFIVFDYS-S 109 (138)
Q Consensus 51 ~~v~~~~~~t~~gvd---d~-----------------~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 109 (138)
..+.++ ..++|+| |. +++.+|..... +. ..++..++.+++++.++...... +
T Consensus 203 ~~~~~~--~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (325)
T cd05280 203 DESKKP--LLKARWAGAIDTVGGDVLANLLKQTKYGGVVASCGNAAGP----EL-TTTVLPFILRGVSLLGIDSVNCPME 275 (325)
T ss_pred HHHHHH--hcCCCccEEEECCchHHHHHHHHhhcCCCEEEEEecCCCC----cc-ccccchheeeeeEEEEEEeecCchh
Confidence 222230 2235666 21 44444432210 11 22233344688888876654332 2
Q ss_pred hHHHHHHHHHHHHHhCCce
Q 039288 110 VYPEFLEMILPYIREKARL 128 (138)
Q Consensus 110 ~~~~~~~~~~~~~~~g~l~ 128 (138)
...+.++.+..++..+..+
T Consensus 276 ~~~~~~~~~~~~~~~~~~~ 294 (325)
T cd05280 276 LRKQVWQKLATEWKPDLLE 294 (325)
T ss_pred HHHHHHHHHHHHHhcCCcc
Confidence 3445666677776666433
No 95
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=98.00 E-value=0.00012 Score=54.52 Aligned_cols=119 Identities=18% Similarity=0.117 Sum_probs=72.7
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce--------e--------------------ecCCceEeecCccccHHHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV--------Y--------------------RSGFDDAFNYKEELDLNATL 53 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv--------~--------------------~lGad~vi~~~~~~~~~~~v 53 (138)
++.|||+++.+..++++|+ ++||+|+++++ . ..|.+.+++.... ++.+.+
T Consensus 150 ~~~~a~~~l~~~~~~~~~~-~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 227 (342)
T cd08266 150 TFLTAWHMLVTRARLRPGE-TVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKELGADYVIDYRKE-DFVREV 227 (342)
T ss_pred HHHHHHHHHHHhcCCCCCC-EEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCeEEecCCh-HHHHHH
Confidence 4678999998889999999 99999998777 0 2355667776666 677777
Q ss_pred hhhhccCC-CCcc---cc-----------eeeeeeeeeecCCC-CCcchhcHHHHHhcCeeeeeeeeccccchHHHHHHH
Q 039288 54 KRSVRFFP-TCHQ---TA-----------ALRFCEMTSQYNLD-LPENVHNLMFVVFGRSRMQGFIVFDYSSVYPEFLEM 117 (138)
Q Consensus 54 ~~~~~~t~-~gvd---d~-----------~~~~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (138)
.+ .+. +++| +. .+...|.+...+.. ......+....+.+++++.+.... ....+.+
T Consensus 228 ~~---~~~~~~~d~~i~~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 299 (342)
T cd08266 228 RE---LTGKRGVDVVVEHVGAATWEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILGSTMG-----TKAELDE 299 (342)
T ss_pred HH---HhCCCCCcEEEECCcHHHHHHHHHHhhcCCEEEEEecCCCCCCCcCHHHHhhcceEEEEEecC-----CHHHHHH
Confidence 76 553 5677 21 12222333222111 011122232345677777765432 2346677
Q ss_pred HHHHHHhCCceec
Q 039288 118 ILPYIREKARLSM 130 (138)
Q Consensus 118 ~~~~~~~g~l~~~ 130 (138)
++++++++.+++.
T Consensus 300 ~~~~l~~~~l~~~ 312 (342)
T cd08266 300 ALRLVFRGKLKPV 312 (342)
T ss_pred HHHHHHcCCcccc
Confidence 8888888887754
No 96
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=97.98 E-value=7.3e-05 Score=55.98 Aligned_cols=112 Identities=17% Similarity=0.081 Sum_probs=65.0
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce------------------------eecCCceEeecCccccHHHHHhhhh
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV------------------------YRSGFDDAFNYKEELDLNATLKRSV 57 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv------------------------~~lGad~vi~~~~~~~~~~~v~~~~ 57 (138)
+++|||+++.. +++++|+ +|+|+|++|++ .++|+++++++++ +.+.+++
T Consensus 147 ~~~~a~~~l~~-~~~~~g~-~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~~~~~~~~g~~~~~~~~~---~~~~l~~-- 219 (325)
T cd08264 147 AALTAYHALKT-AGLGPGE-TVVVFGASGNTGIFAVQLAKMMGAEVIAVSRKDWLKEFGADEVVDYDE---VEEKVKE-- 219 (325)
T ss_pred hhHHHHHHHHh-cCCCCCC-EEEEECCCchHHHHHHHHHHHcCCeEEEEeHHHHHHHhCCCeeecchH---HHHHHHH--
Confidence 46799999865 8999999 99999998888 1457778887642 3455666
Q ss_pred ccCCCCcc---cc-----------eeeeeeeeeecCCC-CCcchhcHHHHHhcCeeeeeeeeccccchHHHHHHHHHHHH
Q 039288 58 RFFPTCHQ---TA-----------ALRFCEMTSQYNLD-LPENVHNLMFVVFGRSRMQGFIVFDYSSVYPEFLEMILPYI 122 (138)
Q Consensus 58 ~~t~~gvd---d~-----------~~~~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (138)
.+ +|+| +. .+...|.+...+.. ......++..+..++.++.+.... .++.+.++++++
T Consensus 220 -~~-~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~ 292 (325)
T cd08264 220 -IT-KMADVVINSLGSSFWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIGSTGG-----TRKELLELVKIA 292 (325)
T ss_pred -Hh-CCCCEEEECCCHHHHHHHHHhhccCCEEEEEecCCCCCCccCHHHHhhcCcEEEEccCC-----CHHHHHHHHHHH
Confidence 55 5677 21 12233333222111 111223444455566666553221 234566777777
Q ss_pred HhCCc
Q 039288 123 REKAR 127 (138)
Q Consensus 123 ~~g~l 127 (138)
...++
T Consensus 293 ~~~~~ 297 (325)
T cd08264 293 KDLKV 297 (325)
T ss_pred HcCCc
Confidence 55443
No 97
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=97.98 E-value=8.8e-05 Score=55.43 Aligned_cols=116 Identities=11% Similarity=0.108 Sum_probs=67.9
Q ss_pred chHhHHHHHHhhc--CCCCC-CeEEEEecCCcce----------------------------eecCCceEeecCccccHH
Q 039288 2 PGLTAYANLFENF--SPKMG-EEYVFISAAFSSV----------------------------YRSGFDDAFNYKEELDLN 50 (138)
Q Consensus 2 ~~~TA~~~L~~~~--~~~~g-~~~VLI~gaaggv----------------------------~~lGad~vi~~~~~~~~~ 50 (138)
.++|||++++... .+++| + +|||+|++|++ .++|+++++++++. +.
T Consensus 126 ~~~ta~~~~~~~~~~~~~~~~~-~vlI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~-~~- 202 (323)
T TIGR02823 126 AGFTAALSVMALERNGLTPEDG-PVLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEDYLKELGASEVIDREDL-SP- 202 (323)
T ss_pred hHHHHHHHHHHhhhcCCCCCCc-eEEEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcEEEccccH-HH-
Confidence 3678888775443 37777 6 99999998888 04577788876554 33
Q ss_pred HHHhhhhccCCCCcc---cc-----------------eeeeeeeeeecCCCCCcchhcHHHHHhcCeeeeeeeecccc-c
Q 039288 51 ATLKRSVRFFPTCHQ---TA-----------------ALRFCEMTSQYNLDLPENVHNLMFVVFGRSRMQGFIVFDYS-S 109 (138)
Q Consensus 51 ~~v~~~~~~t~~gvd---d~-----------------~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 109 (138)
.+++ ..+.++| |. +++.+|.... .....++..++.+++++.++...... .
T Consensus 203 -~~~~---~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (323)
T TIGR02823 203 -PGKP---LEKERWAGAVDTVGGHTLANVLAQLKYGGAVAACGLAGG-----PDLPTTVLPFILRGVSLLGIDSVYCPMA 273 (323)
T ss_pred -HHHH---hcCCCceEEEECccHHHHHHHHHHhCCCCEEEEEcccCC-----CCccccHHHHhhcceEEEEEeccccCch
Confidence 3444 3333455 21 4555443311 11112233455788888886543222 2
Q ss_pred hHHHHHHHHHHHHHhCCcee
Q 039288 110 VYPEFLEMILPYIREKARLS 129 (138)
Q Consensus 110 ~~~~~~~~~~~~~~~g~l~~ 129 (138)
..++.++.+.+++..+++++
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~ 293 (323)
T TIGR02823 274 LREAAWQRLATDLKPRNLES 293 (323)
T ss_pred hHHHHHHHHHHHhhcCCCcC
Confidence 34456777777888887754
No 98
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=97.97 E-value=9.7e-05 Score=55.87 Aligned_cols=115 Identities=15% Similarity=0.056 Sum_probs=69.9
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce-----------------------------eecCCceEeecCccccHHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV-----------------------------YRSGFDDAFNYKEELDLNAT 52 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv-----------------------------~~lGad~vi~~~~~~~~~~~ 52 (138)
+..|||+++ ...+++|+ +|||+| +|++ .++|+++++++++. ++.+.
T Consensus 147 ~~~~a~~~~--~~~~~~g~-~vlI~~-~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~-~~~~~ 221 (340)
T TIGR00692 147 PLGNAVHTV--LAGPISGK-SVLVTG-AGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFKE-DVVKE 221 (340)
T ss_pred hHHHHHHHH--HccCCCCC-EEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEccccc-CHHHH
Confidence 467888876 45678999 999976 4776 04677788888877 88888
Q ss_pred HhhhhccCC-CCcc---cc------------eeeeeeeeeecCCCCCcchhcHH-HHHhcCeeeeeeeeccccchHHHHH
Q 039288 53 LKRSVRFFP-TCHQ---TA------------ALRFCEMTSQYNLDLPENVHNLM-FVVFGRSRMQGFIVFDYSSVYPEFL 115 (138)
Q Consensus 53 v~~~~~~t~-~gvd---d~------------~~~~~G~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (138)
+.+ .++ +|+| |. .+...|.+...+......+.+.. .++.+++++.++.. ....+.+
T Consensus 222 l~~---~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 294 (340)
T TIGR00692 222 VAD---LTDGEGVDVFLEMSGAPKALEQGLQAVTPGGRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITG----RHMFETW 294 (340)
T ss_pred HHH---hcCCCCCCEEEECCCCHHHHHHHHHhhcCCCEEEEEccCCCCcccchhhhhhhcceEEEEEec----CCchhhH
Confidence 887 664 5787 21 12223333322211010111122 35566777765542 1233456
Q ss_pred HHHHHHHHhCCce
Q 039288 116 EMILPYIREKARL 128 (138)
Q Consensus 116 ~~~~~~~~~g~l~ 128 (138)
.++++++++|+++
T Consensus 295 ~~~~~~l~~~~l~ 307 (340)
T TIGR00692 295 YTVSRLIQSGKLD 307 (340)
T ss_pred HHHHHHHHcCCCC
Confidence 7888999999886
No 99
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=97.95 E-value=4.9e-05 Score=49.60 Aligned_cols=93 Identities=16% Similarity=0.143 Sum_probs=62.9
Q ss_pred EEEEecCCcce----eecCCceEeecCccccHHHHHhhhhccCC-CCcc---cc------------eeeeeeeeeecCCC
Q 039288 22 YVFISAAFSSV----YRSGFDDAFNYKEELDLNATLKRSVRFFP-TCHQ---TA------------ALRFCEMTSQYNLD 81 (138)
Q Consensus 22 ~VLI~gaaggv----~~lGad~vi~~~~~~~~~~~v~~~~~~t~-~gvd---d~------------~~~~~G~~~~~~~~ 81 (138)
+|++......- .++|+++++|+++. ++.+++++ +++ +|+| |. .+...|.+..++..
T Consensus 16 ~vi~~~~~~~k~~~~~~~Ga~~~~~~~~~-~~~~~i~~---~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~vg~~ 91 (130)
T PF00107_consen 16 KVIATDRSEEKLELAKELGADHVIDYSDD-DFVEQIRE---LTGGRGVDVVIDCVGSGDTLQEAIKLLRPGGRIVVVGVY 91 (130)
T ss_dssp EEEEEESSHHHHHHHHHTTESEEEETTTS-SHHHHHHH---HTTTSSEEEEEESSSSHHHHHHHHHHEEEEEEEEEESST
T ss_pred EEEEEECCHHHHHHHHhhccccccccccc-cccccccc---ccccccceEEEEecCcHHHHHHHHHHhccCCEEEEEEcc
Confidence 66666543222 38999999999998 89999999 886 4888 32 34455555555433
Q ss_pred C-CcchhcHHHHHhcCeeeeeeeeccccchHHHHHHHHHHHHH
Q 039288 82 L-PENVHNLMFVVFGRSRMQGFIVFDYSSVYPEFLEMILPYIR 123 (138)
Q Consensus 82 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (138)
. ...+.+...++.+++++.+++... ++.+++++++++
T Consensus 92 ~~~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~~la 129 (130)
T PF00107_consen 92 GGDPISFNLMNLMFKEITIRGSWGGS-----PEDFQEALQLLA 129 (130)
T ss_dssp STSEEEEEHHHHHHTTEEEEEESSGG-----HHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHhCCcEEEEEccCC-----HHHHHHHHHHhc
Confidence 2 344566788899999999987654 344555555554
No 100
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=97.93 E-value=4.2e-05 Score=58.04 Aligned_cols=58 Identities=16% Similarity=0.075 Sum_probs=49.1
Q ss_pred hHhHHHHHHhhcCCCCCCeEEEEecCCcce-----------------------------eecCCceEeecCccccHHHHH
Q 039288 3 GLTAYANLFENFSPKMGEEYVFISAAFSSV-----------------------------YRSGFDDAFNYKEELDLNATL 53 (138)
Q Consensus 3 ~~TA~~~L~~~~~~~~g~~~VLI~gaaggv-----------------------------~~lGad~vi~~~~~~~~~~~v 53 (138)
.+|.+.+..+.+++++|+ +|.|.|- |+| .++||.|++|.++..+..+.+
T Consensus 170 V~TG~Gav~nta~v~~G~-tvaV~Gl-GgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~~~~~vv~~i 247 (366)
T COG1062 170 VTTGIGAVVNTAKVEPGD-TVAVFGL-GGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPKEVDDVVEAI 247 (366)
T ss_pred eccChHHhhhcccCCCCC-eEEEEec-cHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecchhhhhHHHHH
Confidence 357788888999999999 9999986 677 288999999998751388999
Q ss_pred hhhhccCCCCcc
Q 039288 54 KRSVRFFPTCHQ 65 (138)
Q Consensus 54 ~~~~~~t~~gvd 65 (138)
.+ +|++|+|
T Consensus 248 ~~---~T~gG~d 256 (366)
T COG1062 248 VE---LTDGGAD 256 (366)
T ss_pred HH---hcCCCCC
Confidence 99 8888998
No 101
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.93 E-value=5.3e-05 Score=57.11 Aligned_cols=118 Identities=11% Similarity=0.045 Sum_probs=73.2
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce-----------------------------eecCCceEeecCccc---cH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV-----------------------------YRSGFDDAFNYKEEL---DL 49 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv-----------------------------~~lGad~vi~~~~~~---~~ 49 (138)
|-.++||+. +++.+++|. +|||.|| |.+ .++||+++.+..... ++
T Consensus 154 PLsV~~HAc-r~~~vk~Gs-~vLV~GA-GPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~ 230 (354)
T KOG0024|consen 154 PLSVGVHAC-RRAGVKKGS-KVLVLGA-GPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKSSPQEL 230 (354)
T ss_pred chhhhhhhh-hhcCcccCC-eEEEECC-cHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccccHHHH
Confidence 456889996 479999999 9999997 788 278999988766530 34
Q ss_pred HHHHhhhhccCC-CCcc---cc------------eeeeeeeeeecCCCCCcchhcHHHHHhcCeeeeeeeeccccchHHH
Q 039288 50 NATLKRSVRFFP-TCHQ---TA------------ALRFCEMTSQYNLDLPENVHNLMFVVFGRSRMQGFIVFDYSSVYPE 113 (138)
Q Consensus 50 ~~~v~~~~~~t~-~gvd---d~------------~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (138)
.+.+.. .-+ ...| |. .....|.....+...+..++++.....|++++.+..- | ...
T Consensus 231 ~~~v~~---~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~~~~~fpi~~v~~kE~~~~g~fr--y---~~~ 302 (354)
T KOG0024|consen 231 AELVEK---ALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGAEEIQFPIIDVALKEVDLRGSFR--Y---CNG 302 (354)
T ss_pred HHHHHh---hccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCCCccccChhhhhhheeeeeeeee--e---ccc
Confidence 444444 222 1244 21 2334444332222123335666677788999887532 2 222
Q ss_pred HHHHHHHHHHhCCceec
Q 039288 114 FLEMILPYIREKARLSM 130 (138)
Q Consensus 114 ~~~~~~~~~~~g~l~~~ 130 (138)
.+..+++++.+|++...
T Consensus 303 ~y~~ai~li~sGki~~k 319 (354)
T KOG0024|consen 303 DYPTAIELVSSGKIDVK 319 (354)
T ss_pred cHHHHHHHHHcCCcCch
Confidence 55677888899988643
No 102
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=97.92 E-value=6.4e-05 Score=57.04 Aligned_cols=60 Identities=18% Similarity=0.064 Sum_probs=44.3
Q ss_pred chHhHHHHHHhhc-CCCCCCeEEEEecCCcce--------e---------------------ecCCceEeecCcccc---
Q 039288 2 PGLTAYANLFENF-SPKMGEEYVFISAAFSSV--------Y---------------------RSGFDDAFNYKEELD--- 48 (138)
Q Consensus 2 ~~~TA~~~L~~~~-~~~~g~~~VLI~gaaggv--------~---------------------~lGad~vi~~~~~~~--- 48 (138)
++.|||+++.+.+ ++++|+ +|||+||+|++ . ++|+++++++++. +
T Consensus 134 ~~~ta~~~l~~~~~~~~~g~-~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~~~~~~~~~~~~g~~~~i~~~~~-~~~~ 211 (352)
T cd08247 134 VLGTAYQILEDLGQKLGPDS-KVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTCSSRSAELNKKLGADHFIDYDAH-SGVK 211 (352)
T ss_pred HHHHHHHHHHHhhhccCCCC-eEEEECCCchHHHHHHHHHHhcCCcceEEEEeChhHHHHHHHhCCCEEEecCCC-cccc
Confidence 4679999998887 899999 99999998777 0 3467788888766 5
Q ss_pred HHHHHhhhhccC-CCCcc
Q 039288 49 LNATLKRSVRFF-PTCHQ 65 (138)
Q Consensus 49 ~~~~v~~~~~~t-~~gvd 65 (138)
+..++.++ .+ ++|+|
T Consensus 212 ~~~~~~~~--~~~~~~~d 227 (352)
T cd08247 212 LLKPVLEN--VKGQGKFD 227 (352)
T ss_pred hHHHHHHh--hcCCCCce
Confidence 55555541 34 35777
No 103
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=97.90 E-value=0.00015 Score=56.10 Aligned_cols=117 Identities=16% Similarity=0.028 Sum_probs=71.0
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce-----------------------------eecCCceEeecCcccc-HHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV-----------------------------YRSGFDDAFNYKEELD-LNA 51 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv-----------------------------~~lGad~vi~~~~~~~-~~~ 51 (138)
+++|||+++ +.+++++|+ +|||+| +|++ .+++...++++... + +.+
T Consensus 169 ~~~ta~~~l-~~~~~~~g~-~VlV~g-~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~vi~~~~~-~~~~~ 244 (386)
T cd08283 169 ILPTGYHAA-ELAEVKPGD-TVAVWG-CGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETINFEEV-DDVVE 244 (386)
T ss_pred chhhhHHHH-hhccCCCCC-EEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEEcCCcc-hHHHH
Confidence 468999999 788999999 999996 4776 02323357777664 4 777
Q ss_pred HHhhhhccCC-CCcc---cc---------------------------------eeeeeeeeeecCCCCC-cchhcHHHHH
Q 039288 52 TLKRSVRFFP-TCHQ---TA---------------------------------ALRFCEMTSQYNLDLP-ENVHNLMFVV 93 (138)
Q Consensus 52 ~v~~~~~~t~-~gvd---d~---------------------------------~~~~~G~~~~~~~~~~-~~~~~~~~~~ 93 (138)
.+++ .++ +++| |. .+...|.+...+.... ....++..++
T Consensus 245 ~l~~---~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~ 321 (386)
T cd08283 245 ALRE---LTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYGGTVNKFPIGAAM 321 (386)
T ss_pred HHHH---HcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEcCCCCCcCccCHHHHH
Confidence 7877 664 4677 21 0112223222211111 1122333456
Q ss_pred hcCeeeeeeeeccccchHHHHHHHHHHHHHhCCceec
Q 039288 94 FGRSRMQGFIVFDYSSVYPEFLEMILPYIREKARLSM 130 (138)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~ 130 (138)
.+++++.+... ...+.+.++++++++|++.+.
T Consensus 322 ~~~~~i~~~~~-----~~~~~~~~~~~~l~~g~l~~~ 353 (386)
T cd08283 322 NKGLTLRMGQT-----HVQRYLPRLLELIESGELDPS 353 (386)
T ss_pred hCCcEEEeccC-----CchHHHHHHHHHHHcCCCChh
Confidence 67777776532 234567888899999998753
No 104
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=97.87 E-value=0.00017 Score=52.07 Aligned_cols=58 Identities=33% Similarity=0.296 Sum_probs=43.6
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce----------------------------eecCCceEeecCccccHHHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV----------------------------YRSGFDDAFNYKEELDLNATL 53 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv----------------------------~~lGad~vi~~~~~~~~~~~v 53 (138)
++.|||+++.....+++|+ +|||+|+++ + .++|+++++++... ++.+.+
T Consensus 118 ~~~~a~~~l~~~~~~~~~~-~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~ 194 (271)
T cd05188 118 PLATAYHALRRAGVLKPGD-TVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAKELGADHVIDYKEE-DLEEEL 194 (271)
T ss_pred HHHHHHHHHHhccCCCCCC-EEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCceeccCCcC-CHHHHH
Confidence 5789999999888889999 999999877 6 14577788887776 666665
Q ss_pred hhhhccCCCCcc
Q 039288 54 KRSVRFFPTCHQ 65 (138)
Q Consensus 54 ~~~~~~t~~gvd 65 (138)
.. ..++++|
T Consensus 195 ~~---~~~~~~d 203 (271)
T cd05188 195 RL---TGGGGAD 203 (271)
T ss_pred HH---hcCCCCC
Confidence 43 3345666
No 105
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=97.82 E-value=0.00033 Score=52.26 Aligned_cols=29 Identities=28% Similarity=0.137 Sum_probs=26.5
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV 32 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv 32 (138)
++.|||+++.. +++++|+ ++||+||+|++
T Consensus 147 ~~~ta~~~l~~-~~~~~~~-~vlI~ga~g~v 175 (332)
T cd08259 147 VVGTAVHALKR-AGVKKGD-TVLVTGAGGGV 175 (332)
T ss_pred HHHHHHHHHHH-hCCCCCC-EEEEECCCCHH
Confidence 56899999987 8999999 99999999988
No 106
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=97.82 E-value=0.00023 Score=52.71 Aligned_cols=30 Identities=37% Similarity=0.373 Sum_probs=27.2
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV 32 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv 32 (138)
++.|||+++....++++|+ +|+|+|++|++
T Consensus 127 ~~~~a~~~~~~~~~~~~g~-~vli~g~~g~~ 156 (319)
T cd08267 127 AGLTALQALRDAGKVKPGQ-RVLINGASGGV 156 (319)
T ss_pred HHHHHHHHHHHhcCCCCCC-EEEEEcCCcHH
Confidence 5689999999888899999 99999998877
No 107
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=97.82 E-value=0.00031 Score=52.73 Aligned_cols=110 Identities=15% Similarity=0.110 Sum_probs=66.0
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce--------e---------------------ecCCceEeecCccccHHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV--------Y---------------------RSGFDDAFNYKEELDLNAT 52 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv--------~---------------------~lGad~vi~~~~~~~~~~~ 52 (138)
++.|||+++ +.+++++|+ +|||+| +|++ . ++|+++++++++. ++..+
T Consensus 144 ~~~~a~~~l-~~~~~~~g~-~vlI~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~ 219 (334)
T cd08234 144 PLSCAVHGL-DLLGIKPGD-SVLVFG-AGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSRE-DPEAQ 219 (334)
T ss_pred HHHHHHHHH-HhcCCCCCC-EEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCCC-CHHHH
Confidence 457889988 788999999 999996 4766 1 3355566777665 55544
Q ss_pred HhhhhccCCCCcc---cc------------------eeeeeeeeeecCCCCCcchhcHHHHHhcCeeeeeeeeccccchH
Q 039288 53 LKRSVRFFPTCHQ---TA------------------ALRFCEMTSQYNLDLPENVHNLMFVVFGRSRMQGFIVFDYSSVY 111 (138)
Q Consensus 53 v~~~~~~t~~gvd---d~------------------~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (138)
+. ..++++| |. +++.+|.... ... ...+...++.+++++.+... .
T Consensus 220 -~~---~~~~~vd~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~---~~~-~~~~~~~~~~~~~~~~~~~~------~ 285 (334)
T cd08234 220 -KE---DNPYGFDVVIEATGVPKTLEQAIEYARRGGTVLVFGVYAP---DAR-VSISPFEIFQKELTIIGSFI------N 285 (334)
T ss_pred -HH---hcCCCCcEEEECCCChHHHHHHHHHHhcCCEEEEEecCCC---CCC-cccCHHHHHhCCcEEEEecc------C
Confidence 22 2245677 21 3444433211 001 11222334456777766542 2
Q ss_pred HHHHHHHHHHHHhCCcee
Q 039288 112 PEFLEMILPYIREKARLS 129 (138)
Q Consensus 112 ~~~~~~~~~~~~~g~l~~ 129 (138)
.+.+++++++++++++++
T Consensus 286 ~~~~~~~~~~~~~~~l~~ 303 (334)
T cd08234 286 PYTFPRAIALLESGKIDV 303 (334)
T ss_pred HHHHHHHHHHHHcCCCCh
Confidence 345788889999998874
No 108
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=97.81 E-value=0.0002 Score=54.19 Aligned_cols=114 Identities=15% Similarity=0.132 Sum_probs=67.0
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce----------------------------eecCCceEeecCccccHHHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV----------------------------YRSGFDDAFNYKEELDLNATL 53 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv----------------------------~~lGad~vi~~~~~~~~~~~v 53 (138)
+++|||+++... .+++|+ +|+|.| .|++ .++|++++++++.. ++.+..
T Consensus 154 ~~~ta~~~~~~~-~~~~g~-~vlV~g-~g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~-~~~~~~ 229 (337)
T cd05283 154 AGITVYSPLKRN-GVGPGK-RVGVVG-IGGLGHLAVKFAKALGAEVTAFSRSPSKKEDALKLGADEFIATKDP-EAMKKA 229 (337)
T ss_pred HHHHHHHHHHhc-CCCCCC-EEEEEC-CcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCcEEecCcch-hhhhhc
Confidence 468999998765 599999 999976 5777 04567777776554 433221
Q ss_pred hhhhccCCCCcc---cc------------eeeeeeeeeecCCCCCcchhcHHHHHhcCeeeeeeeeccccchHHHHHHHH
Q 039288 54 KRSVRFFPTCHQ---TA------------ALRFCEMTSQYNLDLPENVHNLMFVVFGRSRMQGFIVFDYSSVYPEFLEMI 118 (138)
Q Consensus 54 ~~~~~~t~~gvd---d~------------~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (138)
++++| +. .+...|.+...+......+.+...++.+++++.+.... ..+.++++
T Consensus 230 -------~~~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-----~~~~~~~~ 297 (337)
T cd05283 230 -------AGSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEPLPVPPFPLIFGRKSVAGSLIG-----GRKETQEM 297 (337)
T ss_pred -------cCCceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCCCCccCHHHHhcCceEEEEeccc-----CHHHHHHH
Confidence 23454 10 12222333222111111123444556788888886553 23467788
Q ss_pred HHHHHhCCceece
Q 039288 119 LPYIREKARLSMR 131 (138)
Q Consensus 119 ~~~~~~g~l~~~~ 131 (138)
++++++|++++.+
T Consensus 298 ~~~~~~~~l~~~~ 310 (337)
T cd05283 298 LDFAAEHGIKPWV 310 (337)
T ss_pred HHHHHhCCCccce
Confidence 8999999987643
No 109
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=97.80 E-value=0.00019 Score=54.20 Aligned_cols=52 Identities=31% Similarity=0.438 Sum_probs=39.2
Q ss_pred chHhHHHHHHhhcCCCC----CCeEEEEecCCcce--------e-------------------ecCCceEeecCccccHH
Q 039288 2 PGLTAYANLFENFSPKM----GEEYVFISAAFSSV--------Y-------------------RSGFDDAFNYKEELDLN 50 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~----g~~~VLI~gaaggv--------~-------------------~lGad~vi~~~~~~~~~ 50 (138)
+++|||+++.+.+.+++ |+ +|+|+|++|++ . ++|+++++++... ++.
T Consensus 142 ~~~ta~~~l~~~~~~~~~~~~g~-~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~ 219 (350)
T cd08248 142 AGLTAWSALVNVGGLNPKNAAGK-RVLILGGSGGVGTFAIQLLKAWGAHVTTTCSTDAIPLVKSLGADDVIDYNNE-DFE 219 (350)
T ss_pred HHHHHHHHHHHhccCCCccCCCC-EEEEECCCChHHHHHHHHHHHCCCeEEEEeCcchHHHHHHhCCceEEECCCh-hHH
Confidence 57899999988888865 99 99999998888 0 3466677777665 566
Q ss_pred HHHhh
Q 039288 51 ATLKR 55 (138)
Q Consensus 51 ~~v~~ 55 (138)
+++..
T Consensus 220 ~~l~~ 224 (350)
T cd08248 220 EELTE 224 (350)
T ss_pred HHHHh
Confidence 55544
No 110
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=97.78 E-value=0.00017 Score=55.37 Aligned_cols=119 Identities=21% Similarity=0.104 Sum_probs=75.2
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce-----------------------------ee-cCCceEeecCccccHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV-----------------------------YR-SGFDDAFNYKEELDLNA 51 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv-----------------------------~~-lGad~vi~~~~~~~~~~ 51 (138)
+..|||++.......+++. +|+|.|+ |.+ .+ .|++.+++..++ +..+
T Consensus 152 pla~~~~~~a~~~~~~~~~-~V~V~Ga-GpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~-~~~~ 228 (350)
T COG1063 152 PLATAYHGHAERAAVRPGG-TVVVVGA-GPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSED-DAGA 228 (350)
T ss_pred hhhhhhhhhhhccCCCCCC-EEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCccc-cHHH
Confidence 4678877755666778888 9999987 788 14 577777776665 5677
Q ss_pred HHhhhhccCC-CCcc---cc------------eeeeeeeeeecCCCCCcc-hhcHHHHHhcCeeeeeeeeccccchHHHH
Q 039288 52 TLKRSVRFFP-TCHQ---TA------------ALRFCEMTSQYNLDLPEN-VHNLMFVVFGRSRMQGFIVFDYSSVYPEF 114 (138)
Q Consensus 52 ~v~~~~~~t~-~gvd---d~------------~~~~~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (138)
.+.+ .|+ .|+| |+ .+...|.+...+...... +.+...+..|++++.+.... ..+..
T Consensus 229 ~~~~---~t~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~~----~~~~~ 301 (350)
T COG1063 229 EILE---LTGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRP----SGRED 301 (350)
T ss_pred HHHH---HhCCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhcccEEEeccCC----CCccc
Confidence 7777 774 5899 32 122222222221111111 34456678899999886321 12235
Q ss_pred HHHHHHHHHhCCceec
Q 039288 115 LEMILPYIREKARLSM 130 (138)
Q Consensus 115 ~~~~~~~~~~g~l~~~ 130 (138)
+.++++++.+|++.+.
T Consensus 302 ~~~~~~ll~~g~i~~~ 317 (350)
T COG1063 302 FERALDLLASGKIDPE 317 (350)
T ss_pred HHHHHHHHHcCCCChh
Confidence 6678889999998765
No 111
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=97.75 E-value=0.0002 Score=53.82 Aligned_cols=29 Identities=28% Similarity=0.246 Sum_probs=25.7
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV 32 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv 32 (138)
++.|||+++.+. ++++|+ +|||+|++|++
T Consensus 147 ~~~~a~~~~~~~-~~~~~~-~vlI~g~~g~~ 175 (334)
T PRK13771 147 VTGMVYRGLRRA-GVKKGE-TVLVTGAGGGV 175 (334)
T ss_pred hHHHHHHHHHhc-CCCCCC-EEEEECCCccH
Confidence 568999999776 899999 99999998888
No 112
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=97.74 E-value=0.00032 Score=53.00 Aligned_cols=111 Identities=14% Similarity=0.099 Sum_probs=65.7
Q ss_pred hHhHHHHHHhhcCCCCCCeEEEEecCCcce-----------------------------eecCCceEeecCccccHHHHH
Q 039288 3 GLTAYANLFENFSPKMGEEYVFISAAFSSV-----------------------------YRSGFDDAFNYKEELDLNATL 53 (138)
Q Consensus 3 ~~TA~~~L~~~~~~~~g~~~VLI~gaaggv-----------------------------~~lGad~vi~~~~~~~~~~~v 53 (138)
+.++++++.. ..++|+ +|+|+| +|++ .++|+++++++++. ++.+.+
T Consensus 150 ~~~~~~~~~~--~~~~g~-~vlV~~-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~~-~~~~~~ 224 (341)
T PRK05396 150 FGNAVHTALS--FDLVGE-DVLITG-AGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAKE-DLRDVM 224 (341)
T ss_pred HHHHHHHHHc--CCCCCC-eEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCccc-cHHHHH
Confidence 4455555432 356899 999987 4776 15688899999887 788888
Q ss_pred hhhhccC-CCCcc---cc------------eeeeeeeeeecCCCCCcchhcHHHHHhcCeeeeeeeeccccchHHHHHHH
Q 039288 54 KRSVRFF-PTCHQ---TA------------ALRFCEMTSQYNLDLPENVHNLMFVVFGRSRMQGFIVFDYSSVYPEFLEM 117 (138)
Q Consensus 54 ~~~~~~t-~~gvd---d~------------~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (138)
++ .+ ++|+| |. .+...|.+..++......+.++..+..+++++.++.... ..+.+.+
T Consensus 225 ~~---~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~~~~~~ 297 (341)
T PRK05396 225 AE---LGMTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGDMAIDWNKVIFKGLTIKGIYGRE----MFETWYK 297 (341)
T ss_pred HH---hcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCcccHHHHhhcceEEEEEEccC----ccchHHH
Confidence 87 66 46788 31 222334433332111111122355666778877764322 1234456
Q ss_pred HHHHHHhC
Q 039288 118 ILPYIREK 125 (138)
Q Consensus 118 ~~~~~~~g 125 (138)
++++++++
T Consensus 298 ~~~~~~~~ 305 (341)
T PRK05396 298 MSALLQSG 305 (341)
T ss_pred HHHHHHcC
Confidence 77788877
No 113
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=97.68 E-value=0.00058 Score=50.10 Aligned_cols=30 Identities=43% Similarity=0.521 Sum_probs=26.6
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV 32 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv 32 (138)
.+.|||+++.+.+++++|+ +|||+|++|++
T Consensus 128 ~~~~a~~~~~~~~~~~~~~-~vlv~g~~g~~ 157 (309)
T cd05289 128 AGLTAWQALFELGGLKAGQ-TVLIHGAAGGV 157 (309)
T ss_pred HHHHHHHHHHhhcCCCCCC-EEEEecCCchH
Confidence 4678999998888899999 99999998877
No 114
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=97.66 E-value=0.00054 Score=53.35 Aligned_cols=56 Identities=16% Similarity=0.188 Sum_probs=39.7
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce-----------------------------eecCCceEeec-CccccHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV-----------------------------YRSGFDDAFNY-KEELDLNA 51 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv-----------------------------~~lGad~vi~~-~~~~~~~~ 51 (138)
++.|||+++. .+++++|+ +|||.| +|++ .++|++. +++ ++. ++.+
T Consensus 170 ~~~ta~~a~~-~~~~~~g~-~VlV~G-~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~~Ga~~-v~~~~~~-~~~~ 244 (393)
T TIGR02819 170 IFPTGYHGAV-TAGVGPGS-TVYIAG-AGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARSFGCET-VDLSKDA-TLPE 244 (393)
T ss_pred HHHHHHHHHH-hcCCCCCC-EEEEEC-CCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHcCCeE-EecCCcc-cHHH
Confidence 4679999886 57899999 999954 5788 1567764 444 344 6777
Q ss_pred HHhhhhccCC-CCcc
Q 039288 52 TLKRSVRFFP-TCHQ 65 (138)
Q Consensus 52 ~v~~~~~~t~-~gvd 65 (138)
.+.+ .++ +|+|
T Consensus 245 ~v~~---~~~~~g~D 256 (393)
T TIGR02819 245 QIEQ---ILGEPEVD 256 (393)
T ss_pred HHHH---HcCCCCCc
Confidence 7877 663 4666
No 115
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=97.65 E-value=0.00037 Score=52.73 Aligned_cols=114 Identities=20% Similarity=0.127 Sum_probs=67.4
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce-----------------------------eecCCceEeecCccccHHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV-----------------------------YRSGFDDAFNYKEELDLNAT 52 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv-----------------------------~~lGad~vi~~~~~~~~~~~ 52 (138)
+..+||+++. ...++|+ +|||+|+ |++ .++|+++++++++. ++. .
T Consensus 149 ~~~~a~~~~~--~~~~~g~-~vlV~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~-~ 222 (341)
T cd05281 149 PLGNAVHTVL--AGDVSGK-SVLITGC-GPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPREE-DVV-E 222 (341)
T ss_pred HHHHHHHHHH--hcCCCCC-EEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCcccc-cHH-H
Confidence 3567887764 4568999 9999874 776 04577888888777 787 8
Q ss_pred HhhhhccCC-CCcc---cc------------eeeeeeeeeecCCCCCcchhcH-HHHHhcCeeeeeeeeccccchHHHHH
Q 039288 53 LKRSVRFFP-TCHQ---TA------------ALRFCEMTSQYNLDLPENVHNL-MFVVFGRSRMQGFIVFDYSSVYPEFL 115 (138)
Q Consensus 53 v~~~~~~t~-~gvd---d~------------~~~~~G~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (138)
+++ .++ +++| |. .+...|.+..++........++ ..+..+++++.++... ...+.+
T Consensus 223 ~~~---~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 295 (341)
T cd05281 223 VKS---VTDGTGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGR----KMFETW 295 (341)
T ss_pred HHH---HcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCcccccchhhhccceEEEEEecC----CcchhH
Confidence 877 664 5788 21 2223333333221100011111 1245567777665422 223456
Q ss_pred HHHHHHHHhCCce
Q 039288 116 EMILPYIREKARL 128 (138)
Q Consensus 116 ~~~~~~~~~g~l~ 128 (138)
.++++++++|.++
T Consensus 296 ~~~~~~l~~~~l~ 308 (341)
T cd05281 296 YQVSALLKSGKVD 308 (341)
T ss_pred HHHHHHHHcCCCC
Confidence 7788899999875
No 116
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=97.65 E-value=0.00056 Score=51.54 Aligned_cols=28 Identities=18% Similarity=0.207 Sum_probs=23.0
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV 32 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv 32 (138)
+++|||+++.+...+ +|+ +|||+|+ |++
T Consensus 150 ~~~~a~~~l~~~~~~-~~~-~VLI~g~-g~v 177 (339)
T cd08232 150 PLAVALHAVNRAGDL-AGK-RVLVTGA-GPI 177 (339)
T ss_pred hHHHHHHHHHhcCCC-CCC-EEEEECC-CHH
Confidence 568999999877777 999 9999874 676
No 117
>PLN02702 L-idonate 5-dehydrogenase
Probab=97.58 E-value=0.0009 Score=51.14 Aligned_cols=109 Identities=9% Similarity=0.053 Sum_probs=66.8
Q ss_pred HhHHHHHHhhcCCCCCCeEEEEecCCcce-----------------------------eecCCceEeecC--ccccHHHH
Q 039288 4 LTAYANLFENFSPKMGEEYVFISAAFSSV-----------------------------YRSGFDDAFNYK--EELDLNAT 52 (138)
Q Consensus 4 ~TA~~~L~~~~~~~~g~~~VLI~gaaggv-----------------------------~~lGad~vi~~~--~~~~~~~~ 52 (138)
.+||+++ ...++++|+ +|||+| +|++ .++|++++++++ .+ ++.+.
T Consensus 168 ~~a~~~~-~~~~~~~g~-~vlI~g-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~ 243 (364)
T PLN02702 168 SVGVHAC-RRANIGPET-NVLVMG-AGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIE-DVESE 243 (364)
T ss_pred HHHHHHH-HhcCCCCCC-EEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEecCcccc-cHHHH
Confidence 4578877 678899999 999996 5767 146888877653 34 67777
Q ss_pred HhhhhccCCCCcc---cc------------------eeeeeeeeeecCCCCCcchhcHHHHHhcCeeeeeeeeccccchH
Q 039288 53 LKRSVRFFPTCHQ---TA------------------ALRFCEMTSQYNLDLPENVHNLMFVVFGRSRMQGFIVFDYSSVY 111 (138)
Q Consensus 53 v~~~~~~t~~gvd---d~------------------~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (138)
+.++...+++++| |. +++.+|.... . .+.....+..+++++.+++..
T Consensus 244 ~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~-~~~~~~~~~~~~~~i~~~~~~------ 311 (364)
T PLN02702 244 VEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHN-----E-MTVPLTPAAAREVDVVGVFRY------ 311 (364)
T ss_pred HHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCC-----C-CcccHHHHHhCccEEEEeccC------
Confidence 6651001234677 21 4444443211 1 112333456788888876532
Q ss_pred HHHHHHHHHHHHhCCce
Q 039288 112 PEFLEMILPYIREKARL 128 (138)
Q Consensus 112 ~~~~~~~~~~~~~g~l~ 128 (138)
...++++++++++|++.
T Consensus 312 ~~~~~~~~~~~~~~~l~ 328 (364)
T PLN02702 312 RNTWPLCLEFLRSGKID 328 (364)
T ss_pred hHHHHHHHHHHHcCCCC
Confidence 23567788899999875
No 118
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=97.56 E-value=0.00071 Score=50.58 Aligned_cols=30 Identities=30% Similarity=0.274 Sum_probs=27.3
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV 32 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv 32 (138)
++.|||+++.+.+++++|+ +|+|+|++|++
T Consensus 123 ~~~ta~~~l~~~~~~~~g~-~vlI~g~~g~i 152 (331)
T cd08273 123 NYVTAYQMLHRAAKVLTGQ-RVLIHGASGGV 152 (331)
T ss_pred HHHHHHHHHHHhcCCCCCC-EEEEECCCcHH
Confidence 5689999998888999999 99999998888
No 119
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=97.53 E-value=0.00052 Score=44.58 Aligned_cols=24 Identities=17% Similarity=0.014 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHHhCCceeceeee
Q 039288 111 YPEFLEMILPYIREKARLSMRKAQ 134 (138)
Q Consensus 111 ~~~~~~~~~~~~~~g~l~~~~~~~ 134 (138)
.++.++++++++++|+|+|++...
T Consensus 80 ~~~~l~~l~~l~~~G~l~~~i~~~ 103 (127)
T PF13602_consen 80 RAEALEELAELVAEGKLKPPIDRV 103 (127)
T ss_dssp HHHHHHHHHHHHHTTSS---EEEE
T ss_pred HHHHHHHHHHHHHCCCeEEeeccE
Confidence 456799999999999999998754
No 120
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=97.49 E-value=0.0018 Score=49.19 Aligned_cols=29 Identities=3% Similarity=-0.125 Sum_probs=23.1
Q ss_pred chHhHHHHHHhh--cCCCCCCeEEEEecCCcce
Q 039288 2 PGLTAYANLFEN--FSPKMGEEYVFISAAFSSV 32 (138)
Q Consensus 2 ~~~TA~~~L~~~--~~~~~g~~~VLI~gaaggv 32 (138)
+..|||+++... ..+++|+ +|||.|+ |++
T Consensus 145 ~~~~a~~a~~~~~~~~~~~g~-~VlV~G~-G~v 175 (341)
T cd08237 145 LVSVGVHAISRFEQIAHKDRN-VIGVWGD-GNL 175 (341)
T ss_pred hHHHHHHHHHHHhhcCCCCCC-EEEEECC-CHH
Confidence 467889988653 4578999 9999996 888
No 121
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=97.30 E-value=0.003 Score=48.55 Aligned_cols=56 Identities=16% Similarity=0.107 Sum_probs=40.6
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce--------e---------------------ecCCceEeecCccccHHHH
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV--------Y---------------------RSGFDDAFNYKEELDLNAT 52 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv--------~---------------------~lGad~vi~~~~~~~~~~~ 52 (138)
+++|||+++ ..+++++|+ +|||.| +|++ . ++|+ ..++++++ ++.+.
T Consensus 161 ~~~ta~~a~-~~~~~~~g~-~vlI~g-~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~-~~v~~~~~-~~~~~ 235 (375)
T cd08282 161 IFPTGWHGL-ELAGVQPGD-TVAVFG-AGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGA-IPIDFSDG-DPVEQ 235 (375)
T ss_pred hHHHHHHHH-HhcCCCCCC-EEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCC-eEeccCcc-cHHHH
Confidence 468999998 788999999 999975 4777 1 3454 34566666 77788
Q ss_pred HhhhhccCCCCcc
Q 039288 53 LKRSVRFFPTCHQ 65 (138)
Q Consensus 53 v~~~~~~t~~gvd 65 (138)
+++ .+++++|
T Consensus 236 i~~---~~~~~~d 245 (375)
T cd08282 236 ILG---LEPGGVD 245 (375)
T ss_pred HHH---hhCCCCC
Confidence 877 5555566
No 122
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=97.30 E-value=0.0019 Score=49.19 Aligned_cols=32 Identities=13% Similarity=0.161 Sum_probs=19.7
Q ss_pred HHHHhcCeeeeeeeeccccchHHHHHHHHHHHHHhCC
Q 039288 90 MFVVFGRSRMQGFIVFDYSSVYPEFLEMILPYIREKA 126 (138)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 126 (138)
..++.+++++.+..... .+.+.++++++.+++
T Consensus 286 ~~~~~k~~~i~g~~~~~-----~~~~~~~~~~l~~~~ 317 (355)
T cd08230 286 RDLVLGNKALVGSVNAN-----KRHFEQAVEDLAQWK 317 (355)
T ss_pred hhHhhcCcEEEEecCCc-----hhhHHHHHHHHHhcc
Confidence 44667889988864322 223556667776665
No 123
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=97.22 E-value=0.0029 Score=47.46 Aligned_cols=112 Identities=10% Similarity=-0.003 Sum_probs=62.2
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce--------eecCCceEeec--CccccHHHHHh-hhhcc---CCCCcc--
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV--------YRSGFDDAFNY--KEELDLNATLK-RSVRF---FPTCHQ-- 65 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv--------~~lGad~vi~~--~~~~~~~~~v~-~~~~~---t~~gvd-- 65 (138)
++.|||+++.+ . ..+|+ +|||.| +|++ ...|+..|+-. +.+ .+..... ...+. .++|+|
T Consensus 130 ~~~~a~~~~~~-~-~~~~~-~vlV~G-~G~vG~~a~q~ak~~G~~~v~~~~~~~~-rl~~a~~~~~i~~~~~~~~g~Dvv 204 (308)
T TIGR01202 130 LAATARHAVAG-A-EVKVL-PDLIVG-HGTLGRLLARLTKAAGGSPPAVWETNPR-RRDGATGYEVLDPEKDPRRDYRAI 204 (308)
T ss_pred HHHHHHHHHHh-c-ccCCC-cEEEEC-CCHHHHHHHHHHHHcCCceEEEeCCCHH-HHHhhhhccccChhhccCCCCCEE
Confidence 35799999865 3 34699 999997 4888 25688765422 221 1111100 00000 123566
Q ss_pred -cc------------------eeeeeeeeeecCCCCCcchhcHHHHHhcCeeeeeeeeccccchHHHHHHHHHHHHHhCC
Q 039288 66 -TA------------------ALRFCEMTSQYNLDLPENVHNLMFVVFGRSRMQGFIVFDYSSVYPEFLEMILPYIREKA 126 (138)
Q Consensus 66 -d~------------------~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 126 (138)
|. +++.+|.... + .+.++..++.+++++.+.... .++.+.++++++++|+
T Consensus 205 id~~G~~~~~~~~~~~l~~~G~iv~~G~~~~-----~-~~~~~~~~~~~~~~i~~~~~~-----~~~~~~~~~~l~~~g~ 273 (308)
T TIGR01202 205 YDASGDPSLIDTLVRRLAKGGEIVLAGFYTE-----P-VNFDFVPAFMKEARLRIAAEW-----QPGDLHAVRELIESGA 273 (308)
T ss_pred EECCCCHHHHHHHHHhhhcCcEEEEEeecCC-----C-cccccchhhhcceEEEEeccc-----chhHHHHHHHHHHcCC
Confidence 21 5555654211 1 122333456677777654321 2456888999999999
Q ss_pred cee
Q 039288 127 RLS 129 (138)
Q Consensus 127 l~~ 129 (138)
+++
T Consensus 274 i~~ 276 (308)
T TIGR01202 274 LSL 276 (308)
T ss_pred CCh
Confidence 976
No 124
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=97.14 E-value=0.0078 Score=45.10 Aligned_cols=28 Identities=29% Similarity=0.515 Sum_probs=23.2
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV 32 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv 32 (138)
.++|||+++.. .++++|+ +|||+|+ |++
T Consensus 147 ~~~ta~~~l~~-~~~~~~~-~vlI~g~-g~i 174 (330)
T cd08245 147 AGITVYSALRD-AGPRPGE-RVAVLGI-GGL 174 (330)
T ss_pred hHHHHHHHHHh-hCCCCCC-EEEEECC-CHH
Confidence 46899999865 7899999 9999965 556
No 125
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=97.14 E-value=0.0055 Score=45.75 Aligned_cols=26 Identities=15% Similarity=0.111 Sum_probs=20.1
Q ss_pred HhHHHHHHhhcCCCCCCeEEEEecCCcce
Q 039288 4 LTAYANLFENFSPKMGEEYVFISAAFSSV 32 (138)
Q Consensus 4 ~TA~~~L~~~~~~~~g~~~VLI~gaaggv 32 (138)
.++|.+ .+..++++|+ +|||+| +|++
T Consensus 142 ~~~~~~-~~~~~~~~g~-~vlV~g-~g~v 167 (319)
T cd08242 142 AAALEI-LEQVPITPGD-KVAVLG-DGKL 167 (319)
T ss_pred HHHHHH-HHhcCCCCCC-EEEEEC-CCHH
Confidence 345554 4678999999 999996 6788
No 126
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.07 E-value=0.0021 Score=48.63 Aligned_cols=57 Identities=14% Similarity=0.111 Sum_probs=47.1
Q ss_pred HhHHHHHHhhcCCCCCCeEEEEecCCcce-----------------------------eecCCceEeecCccc-cHHHHH
Q 039288 4 LTAYANLFENFSPKMGEEYVFISAAFSSV-----------------------------YRSGFDDAFNYKEEL-DLNATL 53 (138)
Q Consensus 4 ~TA~~~L~~~~~~~~g~~~VLI~gaaggv-----------------------------~~lGad~vi~~~~~~-~~~~~v 53 (138)
.|.|.+..+.++++||+ +|.|.|= |+| .++|+.+.||..+.. ...+.+
T Consensus 178 sTG~GAa~~~Akv~~Gs-tvAVfGL-G~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~iNp~d~~~~i~evi 255 (375)
T KOG0022|consen 178 STGYGAAWNTAKVEPGS-TVAVFGL-GGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEFINPKDLKKPIQEVI 255 (375)
T ss_pred cccchhhhhhcccCCCC-EEEEEec-chHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcceecChhhccccHHHHH
Confidence 58888888899999999 9999984 556 288999999987421 378889
Q ss_pred hhhhccCCCCcc
Q 039288 54 KRSVRFFPTCHQ 65 (138)
Q Consensus 54 ~~~~~~t~~gvd 65 (138)
++ +|+.|||
T Consensus 256 ~E---mTdgGvD 264 (375)
T KOG0022|consen 256 IE---MTDGGVD 264 (375)
T ss_pred HH---HhcCCce
Confidence 99 9989999
No 127
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=97.04 E-value=0.0078 Score=43.98 Aligned_cols=37 Identities=22% Similarity=0.316 Sum_probs=28.8
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce--------eecCCceEe
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV--------YRSGFDDAF 41 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv--------~~lGad~vi 41 (138)
+++|||+++. .+++++|+ ++||+| +|++ ..+|+..|+
T Consensus 82 ~~~ta~~~~~-~~~~~~g~-~vlI~g-~g~vg~~~i~~a~~~g~~~vi 126 (277)
T cd08255 82 LAATALNGVR-DAEPRLGE-RVAVVG-LGLVGLLAAQLAKAAGAREVV 126 (277)
T ss_pred HHHHHHHHHH-hcCCCCCC-EEEEEC-CCHHHHHHHHHHHHcCCCcEE
Confidence 5789999985 78999999 999996 4777 256776344
No 128
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=95.45 E-value=0.019 Score=43.03 Aligned_cols=28 Identities=21% Similarity=0.326 Sum_probs=24.6
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecCCcce
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAAFSSV 32 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~gaaggv 32 (138)
+++|||+++ +.+++++|+ +|||+| +|++
T Consensus 152 ~~~ta~~~~-~~~~~~~~~-~vlV~g-~g~v 179 (329)
T cd08298 152 AGIIGYRAL-KLAGLKPGQ-RLGLYG-FGAS 179 (329)
T ss_pred hhHHHHHHH-HhhCCCCCC-EEEEEC-CcHH
Confidence 578999998 789999999 999996 5777
No 129
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=81.11 E-value=2.1 Score=32.34 Aligned_cols=35 Identities=23% Similarity=0.386 Sum_probs=23.2
Q ss_pred CCCeEEEEecCCcce-------e-ecCCceEe-ecCccccHHHHHh
Q 039288 18 MGEEYVFISAAFSSV-------Y-RSGFDDAF-NYKEELDLNATLK 54 (138)
Q Consensus 18 ~g~~~VLI~gaaggv-------~-~lGad~vi-~~~~~~~~~~~v~ 54 (138)
+|+ .|||+||++|+ + ++|+..++ |-+.+ ...+.++
T Consensus 37 ~g~-~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~-~~~etv~ 80 (300)
T KOG1201|consen 37 SGE-IVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQ-GNEETVK 80 (300)
T ss_pred cCC-EEEEeCCCchHHHHHHHHHHHhCCeEEEEecccc-chHHHHH
Confidence 699 99999999999 2 66775533 44444 3334433
No 130
>PF01455 HupF_HypC: HupF/HypC family; InterPro: IPR001109 The large subunit of [NiFe]-hydrogenase, as well as other nickel metalloenzymes, is synthesised as a precursor devoid of the metalloenzyme active site. This precursor then undergoes a complex post-translational maturation process that requires a number of accessory proteins. The hydrogenase expression/formation proteins (HupF/HypC) form a family of small proteins that are hydrogenase precursor-specific chaperones required for this maturation process []. They are believed to keep the hydrogenase precursor in a conformation accessible for metal incorporation [, ].; PDB: 3D3R_A 2Z1C_C 2OT2_A.
Probab=77.44 E-value=1.6 Score=25.48 Aligned_cols=14 Identities=36% Similarity=0.667 Sum_probs=10.1
Q ss_pred cCCCCCCeEEEEecC
Q 039288 14 FSPKMGEEYVFISAA 28 (138)
Q Consensus 14 ~~~~~g~~~VLI~ga 28 (138)
..+++|+ +||||++
T Consensus 36 ~~v~~Gd-~VLVHaG 49 (68)
T PF01455_consen 36 PDVKVGD-YVLVHAG 49 (68)
T ss_dssp TSB-TT--EEEEETT
T ss_pred CCCCCCC-EEEEecC
Confidence 3478999 9999986
No 131
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=76.18 E-value=3.5 Score=30.69 Aligned_cols=15 Identities=27% Similarity=0.368 Sum_probs=13.5
Q ss_pred CCCCeEEEEecCCcce
Q 039288 17 KMGEEYVFISAAFSSV 32 (138)
Q Consensus 17 ~~g~~~VLI~gaaggv 32 (138)
.++. ++||+||+||+
T Consensus 4 ~~~~-~~lITGASsGI 18 (265)
T COG0300 4 MKGK-TALITGASSGI 18 (265)
T ss_pred CCCc-EEEEECCCchH
Confidence 4678 99999999999
No 132
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=73.50 E-value=3.9 Score=30.77 Aligned_cols=14 Identities=36% Similarity=0.541 Sum_probs=13.1
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
.|. +|+|+|||+|+
T Consensus 11 ~~k-vVvITGASsGI 24 (282)
T KOG1205|consen 11 AGK-VVLITGASSGI 24 (282)
T ss_pred CCC-EEEEeCCCcHH
Confidence 578 99999999999
No 133
>TIGR00074 hypC_hupF hydrogenase assembly chaperone HypC/HupF. An additional proposed function is to shuttle the iron atom that has been liganded at the HypC/HypD complex to the precursor of the large hydrogenase (HycE) subunit. PubMed:12441107.
Probab=72.59 E-value=3.2 Score=24.85 Aligned_cols=14 Identities=29% Similarity=0.572 Sum_probs=12.0
Q ss_pred cCCCCCCeEEEEecC
Q 039288 14 FSPKMGEEYVFISAA 28 (138)
Q Consensus 14 ~~~~~g~~~VLI~ga 28 (138)
..+++|| +||||.+
T Consensus 34 ~~~~vGD-~VLVH~G 47 (76)
T TIGR00074 34 GEVKVGD-YVLVHVG 47 (76)
T ss_pred CCCCCCC-EEEEecC
Confidence 4678999 9999986
No 134
>PRK10409 hydrogenase assembly chaperone; Provisional
Probab=71.04 E-value=3.5 Score=25.58 Aligned_cols=13 Identities=23% Similarity=0.856 Sum_probs=11.3
Q ss_pred CCCCCCeEEEEecC
Q 039288 15 SPKMGEEYVFISAA 28 (138)
Q Consensus 15 ~~~~g~~~VLI~ga 28 (138)
.++.|+ +||||++
T Consensus 41 ~~~vGD-yVLVHaG 53 (90)
T PRK10409 41 QPRVGQ-WVLVHVG 53 (90)
T ss_pred ccCCCC-EEEEecC
Confidence 478999 9999986
No 135
>PRK10413 hydrogenase 2 accessory protein HypG; Provisional
Probab=69.41 E-value=3.8 Score=24.90 Aligned_cols=12 Identities=17% Similarity=0.592 Sum_probs=10.4
Q ss_pred CCCCCeEEEEecC
Q 039288 16 PKMGEEYVFISAA 28 (138)
Q Consensus 16 ~~~g~~~VLI~ga 28 (138)
+++|| +||||.+
T Consensus 43 ~~vGD-yVLVHaG 54 (82)
T PRK10413 43 DLLGQ-WVLVHVG 54 (82)
T ss_pred cccCC-EEEEecc
Confidence 56899 9999986
No 136
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=68.49 E-value=6.8 Score=29.10 Aligned_cols=28 Identities=14% Similarity=0.290 Sum_probs=24.4
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecCcc
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYKEE 46 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~~~ 46 (138)
+|. ++||+|++.|+ .++|+.-+|.++++
T Consensus 7 ~gk-valVTG~s~GIG~aia~~la~~Ga~v~i~~r~~ 42 (270)
T KOG0725|consen 7 AGK-VALVTGGSSGIGKAIALLLAKAGAKVVITGRSE 42 (270)
T ss_pred CCc-EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence 688 99999999999 27899999988876
No 137
>PRK05872 short chain dehydrogenase; Provisional
Probab=67.75 E-value=6.7 Score=29.07 Aligned_cols=27 Identities=22% Similarity=0.208 Sum_probs=19.5
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecCc
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYKE 45 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~~ 45 (138)
+|. ++||+||+||+ .+.|+..++-.++
T Consensus 8 ~gk-~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~ 42 (296)
T PRK05872 8 AGK-VVVVTGAARGIGAELARRLHARGAKLALVDLE 42 (296)
T ss_pred CCC-EEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 588 99999999999 1457655554443
No 138
>PLN02780 ketoreductase/ oxidoreductase
Probab=67.71 E-value=6.8 Score=29.63 Aligned_cols=27 Identities=11% Similarity=0.380 Sum_probs=19.7
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecCc
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYKE 45 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~~ 45 (138)
.|. ++||+||+||+ .+.|++-++-.+.
T Consensus 52 ~g~-~~lITGAs~GIG~alA~~La~~G~~Vil~~R~ 86 (320)
T PLN02780 52 YGS-WALVTGPTDGIGKGFAFQLARKGLNLVLVARN 86 (320)
T ss_pred cCC-EEEEeCCCcHHHHHHHHHHHHCCCCEEEEECC
Confidence 589 99999999999 1557765554443
No 139
>PRK06057 short chain dehydrogenase; Provisional
Probab=66.98 E-value=7.6 Score=27.84 Aligned_cols=26 Identities=15% Similarity=0.091 Sum_probs=19.0
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecC
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYK 44 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~ 44 (138)
+|. +|||+||+|++ .+.|++.++-.+
T Consensus 6 ~~~-~vlItGasggIG~~~a~~l~~~G~~v~~~~r 39 (255)
T PRK06057 6 AGR-VAVITGGGSGIGLATARRLAAEGATVVVGDI 39 (255)
T ss_pred CCC-EEEEECCCchHHHHHHHHHHHcCCEEEEEeC
Confidence 588 99999999999 155766554433
No 140
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=66.67 E-value=7.7 Score=27.97 Aligned_cols=28 Identities=25% Similarity=0.246 Sum_probs=20.2
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecCcc
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYKEE 46 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~~~ 46 (138)
+|. ++||+||+|++ .+.|+..++-.+.+
T Consensus 4 ~~k-~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~ 39 (262)
T TIGR03325 4 KGE-VVLVTGGASGLGRAIVDRFVAEGARVAVLDKSA 39 (262)
T ss_pred CCc-EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence 578 99999999999 15577655544443
No 141
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=66.65 E-value=4.5 Score=30.77 Aligned_cols=27 Identities=19% Similarity=0.219 Sum_probs=20.8
Q ss_pred HhHHHHHHhhcCCCCCCeEEEEecCCcce
Q 039288 4 LTAYANLFENFSPKMGEEYVFISAAFSSV 32 (138)
Q Consensus 4 ~TA~~~L~~~~~~~~g~~~VLI~gaaggv 32 (138)
+|||.-|+..... ++. +|||+||+|=+
T Consensus 1 ~~~~~~~~~~~~~-~~~-~vlVtGatGfi 27 (348)
T PRK15181 1 MTAYEELRTKLVL-APK-RWLITGVAGFI 27 (348)
T ss_pred Cchhhhhhhcccc-cCC-EEEEECCccHH
Confidence 4788887655544 458 99999999877
No 142
>PRK05867 short chain dehydrogenase; Provisional
Probab=66.11 E-value=8 Score=27.67 Aligned_cols=27 Identities=19% Similarity=0.299 Sum_probs=19.8
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecCc
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYKE 45 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~~ 45 (138)
+|. ++||+||+|++ .+.|+.-++..++
T Consensus 8 ~~k-~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~ 42 (253)
T PRK05867 8 HGK-RALITGASTGIGKRVALAYVEAGAQVAIAARH 42 (253)
T ss_pred CCC-EEEEECCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence 588 99999999999 1557765554444
No 143
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=66.08 E-value=8.5 Score=28.18 Aligned_cols=28 Identities=29% Similarity=0.396 Sum_probs=21.2
Q ss_pred CCCeEEEEecCCc--ce--------eecCCceEeecCcc
Q 039288 18 MGEEYVFISAAFS--SV--------YRSGFDDAFNYKEE 46 (138)
Q Consensus 18 ~g~~~VLI~gaag--gv--------~~lGad~vi~~~~~ 46 (138)
+|. ++||+||++ |+ .+.|+.-++.++.+
T Consensus 6 ~~k-~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~ 43 (271)
T PRK06505 6 QGK-RGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGE 43 (271)
T ss_pred CCC-EEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCch
Confidence 688 999999986 88 26688777766543
No 144
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=65.94 E-value=7.2 Score=23.44 Aligned_cols=24 Identities=21% Similarity=0.167 Sum_probs=17.2
Q ss_pred HHHHHhhcCCCCCCeEEEEecCCcc
Q 039288 7 YANLFENFSPKMGEEYVFISAAFSS 31 (138)
Q Consensus 7 ~~~L~~~~~~~~g~~~VLI~gaagg 31 (138)
+.-+.+..++++|+ +||+.+.+.|
T Consensus 57 L~~~~~~g~~~~Gd-~vl~~~~G~G 80 (90)
T PF08541_consen 57 LADALEEGRIKPGD-RVLLVGFGAG 80 (90)
T ss_dssp HHHHHHTTSSCTTE-EEEEEEEETT
T ss_pred HHHHHHcCCCCCCC-EEEEEEEEhh
Confidence 33344567899999 9999876544
No 145
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=64.43 E-value=9.3 Score=27.31 Aligned_cols=27 Identities=15% Similarity=0.222 Sum_probs=20.2
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecCc
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYKE 45 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~~ 45 (138)
.|. ++||+||+|++ .+.|++.++..+.
T Consensus 8 ~~k-~~lItGas~giG~~ia~~L~~~G~~vvl~~r~ 42 (254)
T PRK08085 8 AGK-NILITGSAQGIGFLLATGLAEYGAEIIINDIT 42 (254)
T ss_pred CCC-EEEEECCCChHHHHHHHHHHHcCCEEEEEcCC
Confidence 578 99999999999 2557766665544
No 146
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=63.91 E-value=9 Score=27.59 Aligned_cols=27 Identities=19% Similarity=0.192 Sum_probs=19.7
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecCc
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYKE 45 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~~ 45 (138)
+|. ++||+||+|++ .+.|++-++-.++
T Consensus 5 ~~k-~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~ 39 (263)
T PRK06200 5 HGQ-VALITGGGSGIGRALVERFLAEGARVAVLERS 39 (263)
T ss_pred CCC-EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 578 99999999999 1557765554444
No 147
>PF02073 Peptidase_M29: Thermophilic metalloprotease (M29); InterPro: IPR000787 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M29 (aminopeptidase T family, clan M-). The protein fold of the peptidase domain and the active site residues are not known for any members of the thermophilic metallo-aminopeptidases family.; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 2AYI_D 1ZJC_A.
Probab=63.06 E-value=9.2 Score=30.17 Aligned_cols=45 Identities=18% Similarity=0.273 Sum_probs=26.0
Q ss_pred HHHhhcCCCCCCeEEEEecCCcce----------eecCC-ceEeecCccccHHHHHhh
Q 039288 9 NLFENFSPKMGEEYVFISAAFSSV----------YRSGF-DDAFNYKEELDLNATLKR 55 (138)
Q Consensus 9 ~L~~~~~~~~g~~~VLI~gaaggv----------~~lGa-d~vi~~~~~~~~~~~v~~ 55 (138)
.+..-.++|||| .|+|.+...+. ++.|| .-.+++.++ .+.....+
T Consensus 14 lV~~glnvq~Gq-~v~I~~~~~~~~l~r~l~~~ay~aGA~~v~v~~~d~-~~~r~~~~ 69 (398)
T PF02073_consen 14 LVKYGLNVQPGQ-KVLIRAPVEAAPLARALVEEAYEAGAKYVIVNWSDE-EITRARYE 69 (398)
T ss_dssp HHHTTT---TT--EEEEEEETT-HHHHHHHHHHHHHTT-SCEEEEEE-H-HHHHHHHH
T ss_pred HHHhccCCCCCC-EEEEEecccHHHHHHHHHHHHHHcCCCceEEEeCch-HHHHHHHh
Confidence 445557899999 99999876666 48899 666677776 55544443
No 148
>PRK08339 short chain dehydrogenase; Provisional
Probab=63.00 E-value=10 Score=27.54 Aligned_cols=26 Identities=23% Similarity=0.353 Sum_probs=19.1
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecC
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYK 44 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~ 44 (138)
+|. ++||+||+||+ .+.|+.-++.++
T Consensus 7 ~~k-~~lItGas~gIG~aia~~l~~~G~~V~~~~r 40 (263)
T PRK08339 7 SGK-LAFTTASSKGIGFGVARVLARAGADVILLSR 40 (263)
T ss_pred CCC-EEEEeCCCCcHHHHHHHHHHHCCCEEEEEeC
Confidence 588 99999999999 155776555443
No 149
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=62.42 E-value=12 Score=26.03 Aligned_cols=14 Identities=14% Similarity=0.209 Sum_probs=12.6
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
++. +++|.||+|++
T Consensus 27 ~~~-~vlVlGgtG~i 40 (194)
T cd01078 27 KGK-TAVVLGGTGPV 40 (194)
T ss_pred CCC-EEEEECCCCHH
Confidence 578 99999999988
No 150
>PRK08589 short chain dehydrogenase; Validated
Probab=62.36 E-value=10 Score=27.66 Aligned_cols=28 Identities=14% Similarity=0.007 Sum_probs=20.4
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecCcc
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYKEE 46 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~~~ 46 (138)
+|. ++||+||+|++ .+.|+..++..+.+
T Consensus 5 ~~k-~vlItGas~gIG~aia~~l~~~G~~vi~~~r~~ 40 (272)
T PRK08589 5 ENK-VAVITGASTGIGQASAIALAQEGAYVLAVDIAE 40 (272)
T ss_pred CCC-EEEEECCCchHHHHHHHHHHHCCCEEEEEeCcH
Confidence 578 99999999999 15577666554443
No 151
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=62.35 E-value=10 Score=26.69 Aligned_cols=27 Identities=19% Similarity=0.249 Sum_probs=18.9
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecCc
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYKE 45 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~~ 45 (138)
+|+ +|||+||+|++ .+.|+.-++..++
T Consensus 4 ~~~-~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~ 38 (238)
T PRK05786 4 KGK-KVAIIGVSEGLGYAVAYFALKEGAQVCINSRN 38 (238)
T ss_pred CCc-EEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 478 99999999999 1456654444443
No 152
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=62.34 E-value=10 Score=27.55 Aligned_cols=27 Identities=19% Similarity=0.325 Sum_probs=21.2
Q ss_pred CCeEEEEecCCcce-------e-ecCCceEeecCcc
Q 039288 19 GEEYVFISAAFSSV-------Y-RSGFDDAFNYKEE 46 (138)
Q Consensus 19 g~~~VLI~gaaggv-------~-~lGad~vi~~~~~ 46 (138)
|. +|||+|+++|+ | ++|-.-+|.-+.+
T Consensus 5 gn-TiLITGG~sGIGl~lak~f~elgN~VIi~gR~e 39 (245)
T COG3967 5 GN-TILITGGASGIGLALAKRFLELGNTVIICGRNE 39 (245)
T ss_pred Cc-EEEEeCCcchhhHHHHHHHHHhCCEEEEecCcH
Confidence 77 99999999999 2 6777777766654
No 153
>PRK07825 short chain dehydrogenase; Provisional
Probab=62.06 E-value=9.7 Score=27.58 Aligned_cols=14 Identities=21% Similarity=0.325 Sum_probs=12.5
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
.|. ++||+||+|++
T Consensus 4 ~~~-~ilVtGasggi 17 (273)
T PRK07825 4 RGK-VVAITGGARGI 17 (273)
T ss_pred CCC-EEEEeCCCchH
Confidence 367 99999999999
No 154
>PRK07814 short chain dehydrogenase; Provisional
Probab=61.70 E-value=11 Score=27.18 Aligned_cols=26 Identities=12% Similarity=0.100 Sum_probs=18.5
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecC
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYK 44 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~ 44 (138)
+|. ++||+||+|++ .+.|+..++-.+
T Consensus 9 ~~~-~vlItGasggIG~~~a~~l~~~G~~Vi~~~r 42 (263)
T PRK07814 9 DDQ-VAVVTGAGRGLGAAIALAFAEAGADVLIAAR 42 (263)
T ss_pred CCC-EEEEECCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 578 99999999999 255764444433
No 155
>PRK08628 short chain dehydrogenase; Provisional
Probab=61.24 E-value=8.6 Score=27.54 Aligned_cols=28 Identities=11% Similarity=0.089 Sum_probs=20.7
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecCcc
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYKEE 46 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~~~ 46 (138)
+|. ++||+||+|++ .+.|+..++..+.+
T Consensus 6 ~~~-~ilItGasggiG~~la~~l~~~G~~v~~~~r~~ 41 (258)
T PRK08628 6 KDK-VVIVTGGASGIGAAISLRLAEEGAIPVIFGRSA 41 (258)
T ss_pred CCC-EEEEeCCCChHHHHHHHHHHHcCCcEEEEcCCh
Confidence 578 99999999999 15677766655443
No 156
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=61.15 E-value=11 Score=26.93 Aligned_cols=27 Identities=11% Similarity=0.306 Sum_probs=19.5
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecCc
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYKE 45 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~~ 45 (138)
+|. ++||+||+|++ .+.|+.-++..+.
T Consensus 9 ~~k-~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~ 43 (255)
T PRK07523 9 TGR-RALVTGSSQGIGYALAEGLAQAGAEVILNGRD 43 (255)
T ss_pred CCC-EEEEECCcchHHHHHHHHHHHcCCEEEEEeCC
Confidence 578 99999999999 1557765554443
No 157
>PRK07063 short chain dehydrogenase; Provisional
Probab=61.11 E-value=11 Score=26.97 Aligned_cols=26 Identities=19% Similarity=0.258 Sum_probs=19.1
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecC
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYK 44 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~ 44 (138)
+|. ++||+||+|++ .+.|++-++-.+
T Consensus 6 ~~k-~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r 39 (260)
T PRK07063 6 AGK-VALVTGAAQGIGAAIARAFAREGAAVALADL 39 (260)
T ss_pred CCC-EEEEECCCchHHHHHHHHHHHCCCEEEEEeC
Confidence 478 99999999999 155776555444
No 158
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=61.06 E-value=12 Score=27.15 Aligned_cols=28 Identities=25% Similarity=0.392 Sum_probs=20.7
Q ss_pred CCCeEEEEecCCc--ce-------e-ecCCceEeecCcc
Q 039288 18 MGEEYVFISAAFS--SV-------Y-RSGFDDAFNYKEE 46 (138)
Q Consensus 18 ~g~~~VLI~gaag--gv-------~-~lGad~vi~~~~~ 46 (138)
+|. ++||+||++ |+ + +.|++-++.++.+
T Consensus 7 ~~k-~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~ 44 (260)
T PRK06603 7 QGK-KGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE 44 (260)
T ss_pred CCc-EEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch
Confidence 678 999999997 66 2 5688776665543
No 159
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=61.00 E-value=11 Score=27.78 Aligned_cols=14 Identities=29% Similarity=0.446 Sum_probs=12.5
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
+++ .+||+||+||+
T Consensus 5 ~~k-v~lITGASSGi 18 (246)
T COG4221 5 KGK-VALITGASSGI 18 (246)
T ss_pred CCc-EEEEecCcchH
Confidence 457 89999999999
No 160
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=60.12 E-value=13 Score=27.25 Aligned_cols=29 Identities=24% Similarity=0.297 Sum_probs=21.5
Q ss_pred CCCCCeEEEEecCC--cce--------eecCCceEeecCc
Q 039288 16 PKMGEEYVFISAAF--SSV--------YRSGFDDAFNYKE 45 (138)
Q Consensus 16 ~~~g~~~VLI~gaa--ggv--------~~lGad~vi~~~~ 45 (138)
...|. ++||+||+ +|+ .+.|++-++.++.
T Consensus 7 ~~~~k-~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~ 45 (272)
T PRK08159 7 LMAGK-RGLILGVANNRSIAWGIAKACRAAGAELAFTYQG 45 (272)
T ss_pred cccCC-EEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCc
Confidence 44688 99999997 688 2668877776654
No 161
>PRK06523 short chain dehydrogenase; Provisional
Probab=59.94 E-value=9 Score=27.46 Aligned_cols=14 Identities=7% Similarity=0.344 Sum_probs=13.0
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
+|. ++||+||+|++
T Consensus 8 ~~k-~vlItGas~gI 21 (260)
T PRK06523 8 AGK-RALVTGGTKGI 21 (260)
T ss_pred CCC-EEEEECCCCch
Confidence 588 99999999999
No 162
>PRK06139 short chain dehydrogenase; Provisional
Probab=59.56 E-value=10 Score=28.84 Aligned_cols=27 Identities=26% Similarity=0.326 Sum_probs=19.2
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecCc
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYKE 45 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~~ 45 (138)
+++ +|||+||+||+ .+.|++-++-.+.
T Consensus 6 ~~k-~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~ 40 (330)
T PRK06139 6 HGA-VVVITGASSGIGQATAEAFARRGARLVLAARD 40 (330)
T ss_pred CCC-EEEEcCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 578 99999999999 1456665554443
No 163
>PRK06128 oxidoreductase; Provisional
Probab=59.27 E-value=8.6 Score=28.50 Aligned_cols=26 Identities=38% Similarity=0.480 Sum_probs=20.5
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecC
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYK 44 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~ 44 (138)
+|. ++||+||+|++ .+.|++.++.+.
T Consensus 54 ~~k-~vlITGas~gIG~~~a~~l~~~G~~V~i~~~ 87 (300)
T PRK06128 54 QGR-KALITGADSGIGRATAIAFAREGADIALNYL 87 (300)
T ss_pred CCC-EEEEecCCCcHHHHHHHHHHHcCCEEEEEeC
Confidence 478 99999999999 256887777654
No 164
>PRK05993 short chain dehydrogenase; Provisional
Probab=59.23 E-value=13 Score=27.13 Aligned_cols=14 Identities=21% Similarity=0.387 Sum_probs=12.6
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
.+. +|||+||+|++
T Consensus 3 ~~k-~vlItGasggi 16 (277)
T PRK05993 3 MKR-SILITGCSSGI 16 (277)
T ss_pred CCC-EEEEeCCCcHH
Confidence 578 99999999999
No 165
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=58.81 E-value=12 Score=22.56 Aligned_cols=17 Identities=18% Similarity=0.069 Sum_probs=11.1
Q ss_pred cCCCCC-CeEEEEecCCcce
Q 039288 14 FSPKMG-EEYVFISAAFSSV 32 (138)
Q Consensus 14 ~~~~~g-~~~VLI~gaaggv 32 (138)
..+ +| . +|||.||++|.
T Consensus 34 ~~~-~GpK-~VLViGaStGy 51 (78)
T PF12242_consen 34 GKI-NGPK-KVLVIGASTGY 51 (78)
T ss_dssp ----TS-S-EEEEES-SSHH
T ss_pred CCC-CCCc-eEEEEecCCcc
Confidence 344 44 7 99999999987
No 166
>PRK08265 short chain dehydrogenase; Provisional
Probab=58.60 E-value=13 Score=26.79 Aligned_cols=27 Identities=11% Similarity=0.155 Sum_probs=19.2
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecCc
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYKE 45 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~~ 45 (138)
+|. ++||+||+|++ .+.|++-++..+.
T Consensus 5 ~~k-~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~ 39 (261)
T PRK08265 5 AGK-VAIVTGGATLIGAAVARALVAAGARVAIVDID 39 (261)
T ss_pred CCC-EEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 578 99999999999 1557755554443
No 167
>PRK07478 short chain dehydrogenase; Provisional
Probab=58.35 E-value=14 Score=26.42 Aligned_cols=27 Identities=22% Similarity=0.286 Sum_probs=19.6
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecCc
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYKE 45 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~~ 45 (138)
+|. ++||+||+|++ .+.|+..++-.+.
T Consensus 5 ~~k-~~lItGas~giG~~ia~~l~~~G~~v~~~~r~ 39 (254)
T PRK07478 5 NGK-VAIITGASSGIGRAAAKLFAREGAKVVVGARR 39 (254)
T ss_pred CCC-EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 478 99999999999 1557765554443
No 168
>PRK06194 hypothetical protein; Provisional
Probab=57.73 E-value=13 Score=27.06 Aligned_cols=14 Identities=29% Similarity=0.358 Sum_probs=12.6
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
++. ++||+||+|++
T Consensus 5 ~~k-~vlVtGasggI 18 (287)
T PRK06194 5 AGK-VAVITGAASGF 18 (287)
T ss_pred CCC-EEEEeCCccHH
Confidence 468 99999999999
No 169
>PRK12829 short chain dehydrogenase; Provisional
Probab=57.47 E-value=16 Score=26.05 Aligned_cols=17 Identities=24% Similarity=0.374 Sum_probs=14.4
Q ss_pred CCCCCCeEEEEecCCcce
Q 039288 15 SPKMGEEYVFISAAFSSV 32 (138)
Q Consensus 15 ~~~~g~~~VLI~gaaggv 32 (138)
...++. ++||+||+|++
T Consensus 7 ~~~~~~-~vlItGa~g~i 23 (264)
T PRK12829 7 KPLDGL-RVLVTGGASGI 23 (264)
T ss_pred hccCCC-EEEEeCCCCcH
Confidence 345788 99999999999
No 170
>PRK05854 short chain dehydrogenase; Provisional
Probab=57.34 E-value=14 Score=27.74 Aligned_cols=27 Identities=11% Similarity=0.217 Sum_probs=20.1
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecCc
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYKE 45 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~~ 45 (138)
+|. +++|+||+||+ .+.|+.-++..+.
T Consensus 13 ~gk-~~lITGas~GIG~~~a~~La~~G~~Vil~~R~ 47 (313)
T PRK05854 13 SGK-RAVVTGASDGLGLGLARRLAAAGAEVILPVRN 47 (313)
T ss_pred CCC-EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 588 99999999999 1557765555444
No 171
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=57.28 E-value=15 Score=26.38 Aligned_cols=36 Identities=14% Similarity=0.404 Sum_probs=23.9
Q ss_pred CCCeEEEEecCC--cce-------e-ecCCceEeecCccccHHHHHhh
Q 039288 18 MGEEYVFISAAF--SSV-------Y-RSGFDDAFNYKEELDLNATLKR 55 (138)
Q Consensus 18 ~g~~~VLI~gaa--ggv-------~-~lGad~vi~~~~~~~~~~~v~~ 55 (138)
.|. ++||+||+ +|+ + +.|+.-++.++.+ ...+.+.+
T Consensus 6 ~~k-~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~ 51 (252)
T PRK06079 6 SGK-KIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQK 51 (252)
T ss_pred CCC-EEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHh
Confidence 588 99999998 688 1 5687766665544 33344433
No 172
>PRK07062 short chain dehydrogenase; Provisional
Probab=57.07 E-value=15 Score=26.40 Aligned_cols=27 Identities=15% Similarity=0.236 Sum_probs=19.6
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecCc
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYKE 45 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~~ 45 (138)
+|. ++||+||+|++ .+.|+.-++-+++
T Consensus 7 ~~k-~~lItGas~giG~~ia~~l~~~G~~V~~~~r~ 41 (265)
T PRK07062 7 EGR-VAVVTGGSSGIGLATVELLLEAGASVAICGRD 41 (265)
T ss_pred CCC-EEEEeCCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 578 99999999999 1557765554443
No 173
>PRK05717 oxidoreductase; Validated
Probab=56.94 E-value=15 Score=26.28 Aligned_cols=27 Identities=11% Similarity=0.261 Sum_probs=19.6
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecCc
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYKE 45 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~~ 45 (138)
.|. ++||+||+|++ .+.|+..++-.+.
T Consensus 9 ~~k-~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~ 43 (255)
T PRK05717 9 NGR-VALVTGAARGIGLGIAAWLIAEGWQVVLADLD 43 (255)
T ss_pred CCC-EEEEeCCcchHHHHHHHHHHHcCCEEEEEcCC
Confidence 578 99999999999 1557766554333
No 174
>PRK05876 short chain dehydrogenase; Provisional
Probab=56.79 E-value=15 Score=26.97 Aligned_cols=25 Identities=20% Similarity=0.186 Sum_probs=18.6
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeec
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNY 43 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~ 43 (138)
+|. ++||+||+|++ .+.|++.++-.
T Consensus 5 ~~k-~vlVTGas~gIG~ala~~La~~G~~Vv~~~ 37 (275)
T PRK05876 5 PGR-GAVITGGASGIGLATGTEFARRGARVVLGD 37 (275)
T ss_pred CCC-EEEEeCCCchHHHHHHHHHHHCCCEEEEEe
Confidence 578 99999999999 15577655443
No 175
>PRK09072 short chain dehydrogenase; Provisional
Probab=56.17 E-value=15 Score=26.39 Aligned_cols=26 Identities=12% Similarity=0.097 Sum_probs=18.5
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecC
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYK 44 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~ 44 (138)
++. ++||+||+|++ .+.|+.-++-.+
T Consensus 4 ~~~-~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r 37 (263)
T PRK09072 4 KDK-RVLLTGASGGIGQALAEALAAAGARLLLVGR 37 (263)
T ss_pred CCC-EEEEECCCchHHHHHHHHHHHCCCEEEEEEC
Confidence 578 99999999999 155766444333
No 176
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=56.03 E-value=16 Score=26.90 Aligned_cols=27 Identities=26% Similarity=0.432 Sum_probs=19.8
Q ss_pred CCCeEEEEecCC--cce--------eecCCceEeecCc
Q 039288 18 MGEEYVFISAAF--SSV--------YRSGFDDAFNYKE 45 (138)
Q Consensus 18 ~g~~~VLI~gaa--ggv--------~~lGad~vi~~~~ 45 (138)
.|. ++||+||+ +|+ .+.|+.-++.++.
T Consensus 4 ~~k-~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~ 40 (274)
T PRK08415 4 KGK-KGLIVGVANNKSIAYGIAKACFEQGAELAFTYLN 40 (274)
T ss_pred CCc-EEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecC
Confidence 578 99999997 678 1568876665554
No 177
>PRK06500 short chain dehydrogenase; Provisional
Probab=55.80 E-value=16 Score=25.78 Aligned_cols=14 Identities=21% Similarity=0.406 Sum_probs=12.8
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
+|. ++||+||+|++
T Consensus 5 ~~k-~vlItGasg~i 18 (249)
T PRK06500 5 QGK-TALITGGTSGI 18 (249)
T ss_pred CCC-EEEEeCCCchH
Confidence 578 99999999999
No 178
>PRK12742 oxidoreductase; Provisional
Probab=55.77 E-value=8 Score=27.21 Aligned_cols=25 Identities=20% Similarity=0.408 Sum_probs=18.6
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeec
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNY 43 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~ 43 (138)
+|. ++||+||+|++ .+.|++.++..
T Consensus 5 ~~k-~vlItGasggIG~~~a~~l~~~G~~v~~~~ 37 (237)
T PRK12742 5 TGK-KVLVLGGSRGIGAAIVRRFVTDGANVRFTY 37 (237)
T ss_pred CCC-EEEEECCCChHHHHHHHHHHHCCCEEEEec
Confidence 578 99999999999 15577655543
No 179
>PRK06197 short chain dehydrogenase; Provisional
Probab=55.60 E-value=14 Score=27.39 Aligned_cols=27 Identities=11% Similarity=0.202 Sum_probs=19.9
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecCc
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYKE 45 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~~ 45 (138)
.|. +|||+||+|++ .+.|++.++-.+.
T Consensus 15 ~~k-~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~ 49 (306)
T PRK06197 15 SGR-VAVVTGANTGLGYETAAALAAKGAHVVLAVRN 49 (306)
T ss_pred CCC-EEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 678 99999999999 1557765554443
No 180
>PRK06841 short chain dehydrogenase; Provisional
Probab=55.51 E-value=17 Score=25.92 Aligned_cols=27 Identities=15% Similarity=0.180 Sum_probs=19.2
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecCc
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYKE 45 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~~ 45 (138)
+|. ++||+||+|++ .+.|+.-++-.++
T Consensus 14 ~~k-~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~ 48 (255)
T PRK06841 14 SGK-VAVVTGGASGIGHAIAELFAAKGARVALLDRS 48 (255)
T ss_pred CCC-EEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 578 99999999999 1456654444444
No 181
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=55.29 E-value=16 Score=26.16 Aligned_cols=26 Identities=12% Similarity=0.250 Sum_probs=19.5
Q ss_pred CCCeEEEEecCCcce-------e-ecCCceEeecC
Q 039288 18 MGEEYVFISAAFSSV-------Y-RSGFDDAFNYK 44 (138)
Q Consensus 18 ~g~~~VLI~gaaggv-------~-~lGad~vi~~~ 44 (138)
.|. ++||+||+|++ + +.|+..++-.+
T Consensus 14 ~~k-~vlItGas~gIG~~ia~~l~~~G~~v~~~~~ 47 (258)
T PRK06935 14 DGK-VAIVTGGNTGLGQGYAVALAKAGADIIITTH 47 (258)
T ss_pred CCC-EEEEeCCCchHHHHHHHHHHHCCCEEEEEeC
Confidence 578 99999999999 1 56776655443
No 182
>PRK07831 short chain dehydrogenase; Provisional
Probab=55.11 E-value=19 Score=25.89 Aligned_cols=25 Identities=20% Similarity=0.279 Sum_probs=18.0
Q ss_pred CCCCCeEEEEecCCc-ce--------eecCCceEe
Q 039288 16 PKMGEEYVFISAAFS-SV--------YRSGFDDAF 41 (138)
Q Consensus 16 ~~~g~~~VLI~gaag-gv--------~~lGad~vi 41 (138)
+.+|. ++||+||+| |+ .+.|+.-++
T Consensus 14 ~~~~k-~vlItG~sg~gIG~~ia~~l~~~G~~V~~ 47 (262)
T PRK07831 14 LLAGK-VVLVTAAAGTGIGSATARRALEEGARVVI 47 (262)
T ss_pred ccCCC-EEEEECCCcccHHHHHHHHHHHcCCEEEE
Confidence 45689 999999986 78 155766444
No 183
>PRK09186 flagellin modification protein A; Provisional
Probab=55.01 E-value=17 Score=25.86 Aligned_cols=14 Identities=21% Similarity=0.339 Sum_probs=12.7
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
+|. +|||+||+|++
T Consensus 3 ~~k-~vlItGas~gi 16 (256)
T PRK09186 3 KGK-TILITGAGGLI 16 (256)
T ss_pred CCC-EEEEECCCchH
Confidence 578 99999999999
No 184
>PRK07035 short chain dehydrogenase; Provisional
Probab=54.54 E-value=17 Score=25.91 Aligned_cols=26 Identities=12% Similarity=0.244 Sum_probs=18.5
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecC
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYK 44 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~ 44 (138)
++. ++||+||+|++ .+.|++-++-++
T Consensus 7 ~~k-~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r 40 (252)
T PRK07035 7 TGK-IALVTGASRGIGEAIAKLLAQQGAHVIVSSR 40 (252)
T ss_pred CCC-EEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 467 89999999999 155775444443
No 185
>PRK05866 short chain dehydrogenase; Provisional
Probab=54.44 E-value=15 Score=27.17 Aligned_cols=27 Identities=19% Similarity=0.258 Sum_probs=19.0
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecCc
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYKE 45 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~~ 45 (138)
.|. ++||+||+|++ .+.|++.++-.+.
T Consensus 39 ~~k-~vlItGasggIG~~la~~La~~G~~Vi~~~R~ 73 (293)
T PRK05866 39 TGK-RILLTGASSGIGEAAAEQFARRGATVVAVARR 73 (293)
T ss_pred CCC-EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 468 99999999999 1446665554443
No 186
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=54.14 E-value=18 Score=25.81 Aligned_cols=26 Identities=23% Similarity=0.229 Sum_probs=18.6
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecC
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYK 44 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~ 44 (138)
+|. ++||+||+|++ .+.|+.-++-.+
T Consensus 6 ~~~-~vlItGasg~iG~~la~~l~~~G~~v~~~~r 39 (262)
T PRK13394 6 NGK-TAVVTGAASGIGKEIALELARAGAAVAIADL 39 (262)
T ss_pred CCC-EEEEECCCChHHHHHHHHHHHCCCeEEEEeC
Confidence 578 99999999999 155665544433
No 187
>PLN02253 xanthoxin dehydrogenase
Probab=53.82 E-value=17 Score=26.34 Aligned_cols=26 Identities=8% Similarity=0.213 Sum_probs=19.1
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecC
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYK 44 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~ 44 (138)
.|. ++||+||+|++ .+.|+..++-.+
T Consensus 17 ~~k-~~lItGas~gIG~~la~~l~~~G~~v~~~~~ 50 (280)
T PLN02253 17 LGK-VALVTGGATGIGESIVRLFHKHGAKVCIVDL 50 (280)
T ss_pred CCC-EEEEECCCchHHHHHHHHHHHcCCEEEEEeC
Confidence 478 99999999999 155776555443
No 188
>PRK06196 oxidoreductase; Provisional
Probab=53.69 E-value=17 Score=27.13 Aligned_cols=27 Identities=11% Similarity=0.276 Sum_probs=19.2
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecCc
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYKE 45 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~~ 45 (138)
.|. +|||+||+|++ .+.|+.-++-.+.
T Consensus 25 ~~k-~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~ 59 (315)
T PRK06196 25 SGK-TAIVTGGYSGLGLETTRALAQAGAHVIVPARR 59 (315)
T ss_pred CCC-EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 578 99999999999 1456655554443
No 189
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=53.46 E-value=17 Score=27.23 Aligned_cols=14 Identities=36% Similarity=0.275 Sum_probs=12.7
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
++. ++||+||+|++
T Consensus 5 ~~k-~vlVTGas~gI 18 (322)
T PRK07453 5 AKG-TVIITGASSGV 18 (322)
T ss_pred CCC-EEEEEcCCChH
Confidence 478 99999999999
No 190
>PRK07774 short chain dehydrogenase; Provisional
Probab=53.39 E-value=18 Score=25.62 Aligned_cols=27 Identities=11% Similarity=0.100 Sum_probs=19.4
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecCc
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYKE 45 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~~ 45 (138)
.|. ++||+||+|++ .+.|++.++-.+.
T Consensus 5 ~~k-~vlItGasg~iG~~la~~l~~~g~~vi~~~r~ 39 (250)
T PRK07774 5 DDK-VAIVTGAAGGIGQAYAEALAREGASVVVADIN 39 (250)
T ss_pred CCC-EEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 578 99999999999 1557765554443
No 191
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=53.11 E-value=20 Score=25.91 Aligned_cols=27 Identities=19% Similarity=0.221 Sum_probs=20.0
Q ss_pred CCCeEEEEecCCc--ce--------eecCCceEeecCc
Q 039288 18 MGEEYVFISAAFS--SV--------YRSGFDDAFNYKE 45 (138)
Q Consensus 18 ~g~~~VLI~gaag--gv--------~~lGad~vi~~~~ 45 (138)
+|. ++||+||++ |+ .+.|+.-++.++.
T Consensus 9 ~~k-~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~ 45 (258)
T PRK07533 9 AGK-RGLVVGIANEQSIAWGCARAFRALGAELAVTYLN 45 (258)
T ss_pred CCC-EEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCC
Confidence 588 999999984 77 2668876665554
No 192
>PRK06172 short chain dehydrogenase; Provisional
Probab=52.67 E-value=19 Score=25.60 Aligned_cols=27 Identities=11% Similarity=0.278 Sum_probs=19.4
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecCc
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYKE 45 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~~ 45 (138)
+|. ++||+||+|++ .+.|+.-++-.++
T Consensus 6 ~~k-~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~ 40 (253)
T PRK06172 6 SGK-VALVTGGAAGIGRATALAFAREGAKVVVADRD 40 (253)
T ss_pred CCC-EEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence 578 99999999999 1557765554443
No 193
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=52.43 E-value=21 Score=25.29 Aligned_cols=17 Identities=6% Similarity=0.118 Sum_probs=14.7
Q ss_pred CCCCCCeEEEEecCCcce
Q 039288 15 SPKMGEEYVFISAAFSSV 32 (138)
Q Consensus 15 ~~~~g~~~VLI~gaaggv 32 (138)
+..+|. ++||+||+|++
T Consensus 8 ~~~~~k-~vlItG~~g~i 24 (247)
T PRK08945 8 DLLKDR-IILVTGAGDGI 24 (247)
T ss_pred cccCCC-EEEEeCCCchH
Confidence 355789 99999999999
No 194
>PRK09291 short chain dehydrogenase; Provisional
Probab=51.81 E-value=19 Score=25.65 Aligned_cols=25 Identities=20% Similarity=0.226 Sum_probs=17.9
Q ss_pred CCeEEEEecCCcce--------eecCCceEeecC
Q 039288 19 GEEYVFISAAFSSV--------YRSGFDDAFNYK 44 (138)
Q Consensus 19 g~~~VLI~gaaggv--------~~lGad~vi~~~ 44 (138)
+. ++||+||+|++ .+.|+..++..+
T Consensus 2 ~~-~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r 34 (257)
T PRK09291 2 SK-TILITGAGSGFGREVALRLARKGHNVIAGVQ 34 (257)
T ss_pred CC-EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 56 89999999999 155766555444
No 195
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=51.75 E-value=19 Score=29.95 Aligned_cols=32 Identities=19% Similarity=0.333 Sum_probs=22.4
Q ss_pred hcCCCCCCeEEEEecCCcce--------eecCCceEeecCc
Q 039288 13 NFSPKMGEEYVFISAAFSSV--------YRSGFDDAFNYKE 45 (138)
Q Consensus 13 ~~~~~~g~~~VLI~gaaggv--------~~lGad~vi~~~~ 45 (138)
..+.+.|. +|||.||+|++ .+.|.+-++-.+.
T Consensus 74 ~~~~~~gK-vVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn 113 (576)
T PLN03209 74 ELDTKDED-LAFVAGATGKVGSRTVRELLKLGFRVRAGVRS 113 (576)
T ss_pred ccccCCCC-EEEEECCCCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 44567899 99999999999 1456654443443
No 196
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=51.69 E-value=21 Score=25.52 Aligned_cols=14 Identities=21% Similarity=0.439 Sum_probs=12.7
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
++. ++||+||+|++
T Consensus 7 ~~k-~vlVtGas~gI 20 (260)
T PRK12823 7 AGK-VVVVTGAAQGI 20 (260)
T ss_pred CCC-EEEEeCCCchH
Confidence 478 99999999999
No 197
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=51.50 E-value=21 Score=25.47 Aligned_cols=27 Identities=11% Similarity=0.206 Sum_probs=20.1
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecCc
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYKE 45 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~~ 45 (138)
+|. ++||+||+|++ .+.|+..++-.+.
T Consensus 10 ~~k-~ilItGas~~IG~~la~~l~~~G~~v~~~~r~ 44 (256)
T PRK06124 10 AGQ-VALVTGSARGLGFEIARALAGAGAHVLVNGRN 44 (256)
T ss_pred CCC-EEEEECCCchHHHHHHHHHHHcCCeEEEEeCC
Confidence 588 99999999999 1557766555444
No 198
>PRK08226 short chain dehydrogenase; Provisional
Probab=51.47 E-value=21 Score=25.58 Aligned_cols=28 Identities=18% Similarity=0.231 Sum_probs=20.0
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecCcc
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYKEE 46 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~~~ 46 (138)
++. ++||+||+|++ .+.|++.++-.+.+
T Consensus 5 ~~~-~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~ 40 (263)
T PRK08226 5 TGK-TALITGALQGIGEGIARVFARHGANLILLDISP 40 (263)
T ss_pred CCC-EEEEeCCCChHHHHHHHHHHHCCCEEEEecCCH
Confidence 467 99999999999 15577655544443
No 199
>PRK07109 short chain dehydrogenase; Provisional
Probab=51.45 E-value=18 Score=27.42 Aligned_cols=27 Identities=22% Similarity=0.164 Sum_probs=19.5
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecCc
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYKE 45 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~~ 45 (138)
++. ++||+||+|++ .+.|+..++-.++
T Consensus 7 ~~k-~vlITGas~gIG~~la~~la~~G~~Vvl~~R~ 41 (334)
T PRK07109 7 GRQ-VVVITGASAGVGRATARAFARRGAKVVLLARG 41 (334)
T ss_pred CCC-EEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 578 99999999999 1557765554443
No 200
>PRK08643 acetoin reductase; Validated
Probab=51.39 E-value=21 Score=25.44 Aligned_cols=25 Identities=16% Similarity=0.214 Sum_probs=17.6
Q ss_pred CCeEEEEecCCcce--------eecCCceEeecC
Q 039288 19 GEEYVFISAAFSSV--------YRSGFDDAFNYK 44 (138)
Q Consensus 19 g~~~VLI~gaaggv--------~~lGad~vi~~~ 44 (138)
|. ++||+||+|++ .+.|+..++-.+
T Consensus 2 ~k-~~lItGas~giG~~la~~l~~~G~~v~~~~r 34 (256)
T PRK08643 2 SK-VALVTGAGQGIGFAIAKRLVEDGFKVAIVDY 34 (256)
T ss_pred CC-EEEEECCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 67 89999999999 155765544333
No 201
>PRK07904 short chain dehydrogenase; Provisional
Probab=50.97 E-value=10 Score=27.36 Aligned_cols=17 Identities=6% Similarity=0.087 Sum_probs=14.9
Q ss_pred CCCCCCeEEEEecCCcce
Q 039288 15 SPKMGEEYVFISAAFSSV 32 (138)
Q Consensus 15 ~~~~g~~~VLI~gaaggv 32 (138)
.+..+. +|||+||+||+
T Consensus 4 ~~~~~~-~vlItGas~gi 20 (253)
T PRK07904 4 AVGNPQ-TILLLGGTSEI 20 (253)
T ss_pred ccCCCc-EEEEEcCCcHH
Confidence 356788 99999999999
No 202
>PRK06125 short chain dehydrogenase; Provisional
Probab=50.55 E-value=21 Score=25.53 Aligned_cols=27 Identities=19% Similarity=0.270 Sum_probs=19.6
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecCc
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYKE 45 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~~ 45 (138)
+|. ++||+||+|++ .+.|+.-++-.++
T Consensus 6 ~~k-~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~ 40 (259)
T PRK06125 6 AGK-RVLITGASKGIGAAAAEAFAAEGCHLHLVARD 40 (259)
T ss_pred CCC-EEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence 478 99999999999 2568755554443
No 203
>PRK08703 short chain dehydrogenase; Provisional
Probab=50.11 E-value=24 Score=24.90 Aligned_cols=14 Identities=7% Similarity=0.245 Sum_probs=12.6
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
+|. ++||+||+|++
T Consensus 5 ~~k-~vlItG~sggi 18 (239)
T PRK08703 5 SDK-TILVTGASQGL 18 (239)
T ss_pred CCC-EEEEECCCCcH
Confidence 578 99999999999
No 204
>PRK06398 aldose dehydrogenase; Validated
Probab=50.10 E-value=15 Score=26.47 Aligned_cols=14 Identities=0% Similarity=0.154 Sum_probs=12.8
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
+|. ++||+||+|++
T Consensus 5 ~gk-~vlItGas~gI 18 (258)
T PRK06398 5 KDK-VAIVTGGSQGI 18 (258)
T ss_pred CCC-EEEEECCCchH
Confidence 578 99999999999
No 205
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=50.03 E-value=16 Score=26.31 Aligned_cols=14 Identities=14% Similarity=0.446 Sum_probs=12.7
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
++. ++||+||+|++
T Consensus 8 ~~k-~vlItG~s~gI 21 (266)
T PRK06171 8 QGK-IIIVTGGSSGI 21 (266)
T ss_pred CCC-EEEEeCCCChH
Confidence 478 99999999999
No 206
>PRK08862 short chain dehydrogenase; Provisional
Probab=49.73 E-value=21 Score=25.36 Aligned_cols=27 Identities=19% Similarity=0.239 Sum_probs=19.8
Q ss_pred CCCeEEEEecCCcce-------e-ecCCceEeecCc
Q 039288 18 MGEEYVFISAAFSSV-------Y-RSGFDDAFNYKE 45 (138)
Q Consensus 18 ~g~~~VLI~gaaggv-------~-~lGad~vi~~~~ 45 (138)
+|. ++||+||++|+ + +.|+.-++..++
T Consensus 4 ~~k-~~lVtGas~GIG~aia~~la~~G~~V~~~~r~ 38 (227)
T PRK08862 4 KSS-IILITSAGSVLGRTISCHFARLGATLILCDQD 38 (227)
T ss_pred CCe-EEEEECCccHHHHHHHHHHHHCCCEEEEEcCC
Confidence 578 99999999999 1 557765554444
No 207
>PRK07024 short chain dehydrogenase; Provisional
Probab=49.73 E-value=21 Score=25.58 Aligned_cols=24 Identities=29% Similarity=0.228 Sum_probs=16.9
Q ss_pred CCeEEEEecCCcce--------eecCCceEeec
Q 039288 19 GEEYVFISAAFSSV--------YRSGFDDAFNY 43 (138)
Q Consensus 19 g~~~VLI~gaaggv--------~~lGad~vi~~ 43 (138)
+. +|||+||+|++ .+.|++-++-.
T Consensus 2 ~~-~vlItGas~gIG~~la~~l~~~G~~v~~~~ 33 (257)
T PRK07024 2 PL-KVFITGASSGIGQALAREYARQGATLGLVA 33 (257)
T ss_pred CC-EEEEEcCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 46 89999999999 14566554433
No 208
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=49.60 E-value=24 Score=26.90 Aligned_cols=28 Identities=18% Similarity=0.288 Sum_probs=22.3
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecCcc
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYKEE 46 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~~~ 46 (138)
+|. +++|+||++|+ ...|+.-++..++.
T Consensus 34 ~~~-~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~ 69 (314)
T KOG1208|consen 34 SGK-VALVTGATSGIGFETARELALRGAHVVLACRNE 69 (314)
T ss_pred CCc-EEEEECCCCchHHHHHHHHHhCCCEEEEEeCCH
Confidence 578 99999999999 26688777776664
No 209
>PRK06138 short chain dehydrogenase; Provisional
Probab=49.57 E-value=23 Score=25.02 Aligned_cols=27 Identities=19% Similarity=0.256 Sum_probs=18.6
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecCc
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYKE 45 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~~ 45 (138)
+|. ++||+||+|++ .+.|+..++-.+.
T Consensus 4 ~~k-~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~ 38 (252)
T PRK06138 4 AGR-VAIVTGAGSGIGRATAKLFAREGARVVVADRD 38 (252)
T ss_pred CCc-EEEEeCCCchHHHHHHHHHHHCCCeEEEecCC
Confidence 467 89999999999 1456655444433
No 210
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=49.56 E-value=23 Score=25.29 Aligned_cols=27 Identities=15% Similarity=0.137 Sum_probs=19.5
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecCc
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYKE 45 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~~ 45 (138)
.+. +|||.||+|++ .+.|+..++-.+.
T Consensus 10 ~~k-~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~ 44 (255)
T PRK06113 10 DGK-CAIITGAGAGIGKEIAITFATAGASVVVSDIN 44 (255)
T ss_pred CCC-EEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 478 99999999999 1557766554443
No 211
>PRK07890 short chain dehydrogenase; Provisional
Probab=49.50 E-value=25 Score=24.98 Aligned_cols=14 Identities=21% Similarity=0.290 Sum_probs=12.8
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
++. ++||+||+|++
T Consensus 4 ~~k-~vlItGa~~~I 17 (258)
T PRK07890 4 KGK-VVVVSGVGPGL 17 (258)
T ss_pred CCC-EEEEECCCCcH
Confidence 578 99999999999
No 212
>PRK07576 short chain dehydrogenase; Provisional
Probab=49.34 E-value=23 Score=25.65 Aligned_cols=14 Identities=21% Similarity=0.378 Sum_probs=12.9
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
++. ++||+||+|++
T Consensus 8 ~~k-~ilItGasggI 21 (264)
T PRK07576 8 AGK-NVVVVGGTSGI 21 (264)
T ss_pred CCC-EEEEECCCchH
Confidence 688 99999999999
No 213
>PRK06483 dihydromonapterin reductase; Provisional
Probab=49.01 E-value=24 Score=24.83 Aligned_cols=26 Identities=15% Similarity=0.223 Sum_probs=18.4
Q ss_pred CCeEEEEecCCcce--------eecCCceEeecCc
Q 039288 19 GEEYVFISAAFSSV--------YRSGFDDAFNYKE 45 (138)
Q Consensus 19 g~~~VLI~gaaggv--------~~lGad~vi~~~~ 45 (138)
+. ++||+||+|++ .+.|++-++..+.
T Consensus 2 ~k-~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~ 35 (236)
T PRK06483 2 PA-PILITGAGQRIGLALAWHLLAQGQPVIVSYRT 35 (236)
T ss_pred Cc-eEEEECCCChHHHHHHHHHHHCCCeEEEEeCC
Confidence 46 89999999999 1557765554443
No 214
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=48.92 E-value=24 Score=24.90 Aligned_cols=14 Identities=21% Similarity=0.387 Sum_probs=12.5
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
++. ++||+||+|++
T Consensus 4 ~~~-~vlItGasg~i 17 (251)
T PRK07231 4 EGK-VAIVTGASSGI 17 (251)
T ss_pred CCc-EEEEECCCChH
Confidence 467 99999999999
No 215
>PRK12828 short chain dehydrogenase; Provisional
Probab=48.74 E-value=12 Score=26.10 Aligned_cols=14 Identities=29% Similarity=0.546 Sum_probs=12.7
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
+|. ++||+||+|++
T Consensus 6 ~~k-~vlItGatg~i 19 (239)
T PRK12828 6 QGK-VVAITGGFGGL 19 (239)
T ss_pred CCC-EEEEECCCCcH
Confidence 478 99999999999
No 216
>PF07378 FlbT: Flagellar protein FlbT; InterPro: IPR009967 This family consists of several FlbT proteins. FlbT is a post-transcriptional repressor function in flagellum biogenesis. FlbT is associated with the 5' untranslated region (UTR) of fljK (25 kDa flagellin) mRNA and that this association requires a predicted loop structure in the transcript. Mutations within this loop abolish FlbT association and result in increased mRNA stability. It is therefore thought that FlbT promotes the degradation of flagellin mRNA by associating with the 5' UTR [].; GO: 0048027 mRNA 5'-UTR binding, 0006402 mRNA catabolic process, 0045718 negative regulation of flagellum assembly
Probab=48.51 E-value=11 Score=24.91 Aligned_cols=13 Identities=46% Similarity=0.539 Sum_probs=11.6
Q ss_pred CCCCCCeEEEEecC
Q 039288 15 SPKMGEEYVFISAA 28 (138)
Q Consensus 15 ~~~~g~~~VLI~ga 28 (138)
.++||| +++|.||
T Consensus 4 ~LkpgE-Ri~INGA 16 (126)
T PF07378_consen 4 SLKPGE-RIIINGA 16 (126)
T ss_pred eecCCC-EEEEcCe
Confidence 579999 9999987
No 217
>PRK06949 short chain dehydrogenase; Provisional
Probab=48.42 E-value=23 Score=25.18 Aligned_cols=15 Identities=20% Similarity=0.308 Sum_probs=13.3
Q ss_pred CCCCeEEEEecCCcce
Q 039288 17 KMGEEYVFISAAFSSV 32 (138)
Q Consensus 17 ~~g~~~VLI~gaaggv 32 (138)
.+|. ++||+||+|++
T Consensus 7 ~~~k-~ilItGasg~I 21 (258)
T PRK06949 7 LEGK-VALVTGASSGL 21 (258)
T ss_pred CCCC-EEEEECCCcHH
Confidence 3578 99999999999
No 218
>PRK06914 short chain dehydrogenase; Provisional
Probab=48.41 E-value=25 Score=25.43 Aligned_cols=14 Identities=14% Similarity=0.138 Sum_probs=12.4
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
++. ++||+||+|++
T Consensus 2 ~~k-~~lItGasg~i 15 (280)
T PRK06914 2 NKK-IAIVTGASSGF 15 (280)
T ss_pred CCC-EEEEECCCchH
Confidence 467 89999999999
No 219
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=48.05 E-value=24 Score=25.24 Aligned_cols=14 Identities=7% Similarity=0.273 Sum_probs=12.8
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
+|. ++||+||+|++
T Consensus 11 ~~k-~ilItGa~g~I 24 (259)
T PRK08213 11 SGK-TALVTGGSRGL 24 (259)
T ss_pred CCC-EEEEECCCchH
Confidence 578 99999999999
No 220
>PRK06114 short chain dehydrogenase; Provisional
Probab=47.98 E-value=17 Score=26.03 Aligned_cols=26 Identities=27% Similarity=0.286 Sum_probs=19.9
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecC
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYK 44 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~ 44 (138)
+|. ++||+||+|++ .+.|++.++.++
T Consensus 7 ~~k-~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r 40 (254)
T PRK06114 7 DGQ-VAFVTGAGSGIGQRIAIGLAQAGADVALFDL 40 (254)
T ss_pred CCC-EEEEECCCchHHHHHHHHHHHCCCEEEEEeC
Confidence 578 99999999999 156777666554
No 221
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=47.95 E-value=17 Score=26.09 Aligned_cols=26 Identities=19% Similarity=0.310 Sum_probs=20.1
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecC
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYK 44 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~ 44 (138)
+|. ++||+||+|++ .+.|+..++..+
T Consensus 6 ~~k-~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~ 39 (261)
T PRK08936 6 EGK-VVVITGGSTGLGRAMAVRFGKEKAKVVINYR 39 (261)
T ss_pred CCC-EEEEeCCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 678 99999999999 156777666544
No 222
>PRK09242 tropinone reductase; Provisional
Probab=47.73 E-value=25 Score=25.11 Aligned_cols=26 Identities=19% Similarity=0.204 Sum_probs=18.7
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecC
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYK 44 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~ 44 (138)
+|. ++||+||+|++ .+.|++-++-.+
T Consensus 8 ~~k-~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r 41 (257)
T PRK09242 8 DGQ-TALITGASKGIGLAIAREFLGLGADVLIVAR 41 (257)
T ss_pred CCC-EEEEeCCCchHHHHHHHHHHHcCCEEEEEeC
Confidence 578 99999999999 155766544433
No 223
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=47.46 E-value=26 Score=25.48 Aligned_cols=27 Identities=30% Similarity=0.592 Sum_probs=19.5
Q ss_pred CCCeEEEEecCCc--ce-------e-ecCCceEeecCc
Q 039288 18 MGEEYVFISAAFS--SV-------Y-RSGFDDAFNYKE 45 (138)
Q Consensus 18 ~g~~~VLI~gaag--gv-------~-~lGad~vi~~~~ 45 (138)
+|. ++||+||++ |+ + +.|+.-++.+++
T Consensus 5 ~~k-~~lITGas~~~GIG~aia~~la~~G~~vil~~r~ 41 (262)
T PRK07984 5 SGK-RILVTGVASKLSIAYGIAQAMHREGAELAFTYQN 41 (262)
T ss_pred CCC-EEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc
Confidence 578 999999986 67 1 568776665544
No 224
>PRK07677 short chain dehydrogenase; Provisional
Probab=47.40 E-value=25 Score=25.08 Aligned_cols=13 Identities=23% Similarity=0.299 Sum_probs=11.6
Q ss_pred CCeEEEEecCCcce
Q 039288 19 GEEYVFISAAFSSV 32 (138)
Q Consensus 19 g~~~VLI~gaaggv 32 (138)
|. ++||+||+|++
T Consensus 1 ~k-~~lItG~s~gi 13 (252)
T PRK07677 1 EK-VVIITGGSSGM 13 (252)
T ss_pred CC-EEEEeCCCChH
Confidence 46 89999999999
No 225
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=47.13 E-value=27 Score=25.24 Aligned_cols=27 Identities=26% Similarity=0.399 Sum_probs=19.6
Q ss_pred CCCeEEEEecC--Ccce--------eecCCceEeecCc
Q 039288 18 MGEEYVFISAA--FSSV--------YRSGFDDAFNYKE 45 (138)
Q Consensus 18 ~g~~~VLI~ga--aggv--------~~lGad~vi~~~~ 45 (138)
+|. ++||+|| ++|+ .+.|+.-++.++.
T Consensus 5 ~~k-~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~ 41 (261)
T PRK08690 5 QGK-KILITGMISERSIAYGIAKACREQGAELAFTYVV 41 (261)
T ss_pred CCc-EEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCc
Confidence 678 9999997 5577 1568877776543
No 226
>PRK00794 flbT flagellar biosynthesis repressor FlbT; Reviewed
Probab=46.61 E-value=11 Score=24.98 Aligned_cols=14 Identities=50% Similarity=0.690 Sum_probs=12.1
Q ss_pred cCCCCCCeEEEEecC
Q 039288 14 FSPKMGEEYVFISAA 28 (138)
Q Consensus 14 ~~~~~g~~~VLI~ga 28 (138)
..++||| +++|.||
T Consensus 6 l~LKp~E-Ri~INGA 19 (132)
T PRK00794 6 LSLKPGE-RIFINGA 19 (132)
T ss_pred EEecCCC-EEEEcCe
Confidence 3589999 9999987
No 227
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=46.19 E-value=26 Score=25.37 Aligned_cols=26 Identities=19% Similarity=0.179 Sum_probs=18.8
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecC
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYK 44 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~ 44 (138)
++. ++||+||+|++ .+.|+.-++-.+
T Consensus 9 ~~k-~vlVtGas~giG~~ia~~l~~~G~~V~~~~r 42 (278)
T PRK08277 9 KGK-VAVITGGGGVLGGAMAKELARAGAKVAILDR 42 (278)
T ss_pred CCC-EEEEeCCCchHHHHHHHHHHHCCCEEEEEeC
Confidence 578 99999999999 155776555444
No 228
>PRK12791 flbT flagellar biosynthesis repressor FlbT; Reviewed
Probab=46.11 E-value=12 Score=24.93 Aligned_cols=14 Identities=21% Similarity=0.095 Sum_probs=12.0
Q ss_pred cCCCCCCeEEEEecC
Q 039288 14 FSPKMGEEYVFISAA 28 (138)
Q Consensus 14 ~~~~~g~~~VLI~ga 28 (138)
-.++||| +++|.||
T Consensus 5 l~LKP~E-Ri~INGa 18 (131)
T PRK12791 5 VELKPFE-RIVIGQS 18 (131)
T ss_pred EEeCCCC-EEEEcCE
Confidence 3589999 9999986
No 229
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=45.68 E-value=29 Score=24.48 Aligned_cols=14 Identities=0% Similarity=0.083 Sum_probs=12.4
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
++. ++||+||+|++
T Consensus 2 ~~~-~ilItGas~~i 15 (250)
T TIGR03206 2 KDK-TAIVTGGGGGI 15 (250)
T ss_pred CCC-EEEEeCCCChH
Confidence 467 99999999999
No 230
>PRK06484 short chain dehydrogenase; Validated
Probab=45.60 E-value=26 Score=28.06 Aligned_cols=28 Identities=11% Similarity=0.024 Sum_probs=20.0
Q ss_pred CCCCeEEEEecCCcce--------eecCCceEeecCc
Q 039288 17 KMGEEYVFISAAFSSV--------YRSGFDDAFNYKE 45 (138)
Q Consensus 17 ~~g~~~VLI~gaaggv--------~~lGad~vi~~~~ 45 (138)
..|. ++||+||+||+ .+.|+..++..+.
T Consensus 267 ~~~k-~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~ 302 (520)
T PRK06484 267 ESPR-VVAITGGARGIGRAVADRFAAAGDRLLIIDRD 302 (520)
T ss_pred cCCC-EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3688 99999999999 1456655554443
No 231
>PRK12743 oxidoreductase; Provisional
Probab=45.59 E-value=20 Score=25.67 Aligned_cols=24 Identities=21% Similarity=0.440 Sum_probs=18.1
Q ss_pred CCeEEEEecCCcce--------eecCCceEeec
Q 039288 19 GEEYVFISAAFSSV--------YRSGFDDAFNY 43 (138)
Q Consensus 19 g~~~VLI~gaaggv--------~~lGad~vi~~ 43 (138)
+. +|||+||+|++ .+.|+..++.+
T Consensus 2 ~k-~vlItGas~giG~~~a~~l~~~G~~V~~~~ 33 (256)
T PRK12743 2 AQ-VAIVTASDSGIGKACALLLAQQGFDIGITW 33 (256)
T ss_pred CC-EEEEECCCchHHHHHHHHHHHCCCEEEEEe
Confidence 56 89999999999 25677665543
No 232
>PRK08251 short chain dehydrogenase; Provisional
Probab=45.32 E-value=27 Score=24.71 Aligned_cols=13 Identities=23% Similarity=0.353 Sum_probs=11.7
Q ss_pred CCeEEEEecCCcce
Q 039288 19 GEEYVFISAAFSSV 32 (138)
Q Consensus 19 g~~~VLI~gaaggv 32 (138)
+. ++||+||+|++
T Consensus 2 ~k-~vlItGas~gi 14 (248)
T PRK08251 2 RQ-KILITGASSGL 14 (248)
T ss_pred CC-EEEEECCCCHH
Confidence 56 89999999999
No 233
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=45.29 E-value=14 Score=26.68 Aligned_cols=25 Identities=32% Similarity=0.521 Sum_probs=19.7
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeec
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNY 43 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~ 43 (138)
+|+ ++||+||++|+ .+.|+.-++.+
T Consensus 7 ~~k-~vlItGas~gIG~~ia~~l~~~G~~v~~~~ 39 (260)
T PRK08416 7 KGK-TLVISGGTRGIGKAIVYEFAQSGVNIAFTY 39 (260)
T ss_pred CCC-EEEEeCCCchHHHHHHHHHHHCCCEEEEEc
Confidence 688 99999999999 16688766554
No 234
>PRK12744 short chain dehydrogenase; Provisional
Probab=45.23 E-value=26 Score=25.02 Aligned_cols=25 Identities=24% Similarity=0.388 Sum_probs=18.5
Q ss_pred CCCeEEEEecCCcce--------eecCCc-eEeec
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFD-DAFNY 43 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad-~vi~~ 43 (138)
.|. ++||+||+|++ .+.|++ .++..
T Consensus 7 ~~k-~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~ 40 (257)
T PRK12744 7 KGK-VVLIAGGAKNLGGLIARDLAAQGAKAVAIHY 40 (257)
T ss_pred CCc-EEEEECCCchHHHHHHHHHHHCCCcEEEEec
Confidence 478 99999999999 256777 44443
No 235
>PRK07060 short chain dehydrogenase; Provisional
Probab=45.14 E-value=29 Score=24.42 Aligned_cols=14 Identities=29% Similarity=0.484 Sum_probs=12.7
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
+|. +++|+||+|++
T Consensus 8 ~~~-~~lItGa~g~i 21 (245)
T PRK07060 8 SGK-SVLVTGASSGI 21 (245)
T ss_pred CCC-EEEEeCCcchH
Confidence 578 99999999998
No 236
>PRK07985 oxidoreductase; Provisional
Probab=44.99 E-value=21 Score=26.40 Aligned_cols=25 Identities=24% Similarity=0.359 Sum_probs=19.1
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeec
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNY 43 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~ 43 (138)
+|. ++||+||+|++ .+.|++-++.+
T Consensus 48 ~~k-~vlITGas~gIG~aia~~L~~~G~~Vi~~~ 80 (294)
T PRK07985 48 KDR-KALVTGGDSGIGRAAAIAYAREGADVAISY 80 (294)
T ss_pred CCC-EEEEECCCCcHHHHHHHHHHHCCCEEEEec
Confidence 568 99999999999 15677766644
No 237
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=44.84 E-value=14 Score=26.11 Aligned_cols=14 Identities=14% Similarity=0.356 Sum_probs=12.8
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
+|. ++||+||+|++
T Consensus 4 ~~k-~vlItGas~gI 17 (248)
T TIGR01832 4 EGK-VALVTGANTGL 17 (248)
T ss_pred CCC-EEEEECCCchH
Confidence 578 99999999998
No 238
>PRK05875 short chain dehydrogenase; Provisional
Probab=44.39 E-value=30 Score=25.01 Aligned_cols=27 Identities=7% Similarity=0.037 Sum_probs=19.1
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecCc
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYKE 45 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~~ 45 (138)
++. ++||+||+|++ .+.|++-++-+++
T Consensus 6 ~~k-~vlItGasg~IG~~la~~l~~~G~~V~~~~r~ 40 (276)
T PRK05875 6 QDR-TYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRN 40 (276)
T ss_pred CCC-EEEEECCCcHHHHHHHHHHHHCCCeEEEEeCC
Confidence 478 99999999999 1557755444443
No 239
>PRK08303 short chain dehydrogenase; Provisional
Probab=44.39 E-value=19 Score=26.94 Aligned_cols=26 Identities=12% Similarity=0.096 Sum_probs=19.9
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecC
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYK 44 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~ 44 (138)
.|. ++||+||++|+ .+.|++-++.++
T Consensus 7 ~~k-~~lITGgs~GIG~aia~~la~~G~~Vv~~~r 40 (305)
T PRK08303 7 RGK-VALVAGATRGAGRGIAVELGAAGATVYVTGR 40 (305)
T ss_pred CCC-EEEEeCCCchHHHHHHHHHHHCCCEEEEEec
Confidence 578 99999999999 156887666443
No 240
>PRK07791 short chain dehydrogenase; Provisional
Probab=44.17 E-value=20 Score=26.39 Aligned_cols=25 Identities=20% Similarity=0.187 Sum_probs=19.5
Q ss_pred CCCCeEEEEecCCcce--------eecCCceEee
Q 039288 17 KMGEEYVFISAAFSSV--------YRSGFDDAFN 42 (138)
Q Consensus 17 ~~g~~~VLI~gaaggv--------~~lGad~vi~ 42 (138)
-+|. ++||+||++|+ .+.|+..++.
T Consensus 4 l~~k-~~lITGas~GIG~aia~~la~~G~~vii~ 36 (286)
T PRK07791 4 LDGR-VVIVTGAGGGIGRAHALAFAAEGARVVVN 36 (286)
T ss_pred cCCC-EEEEECCCchHHHHHHHHHHHCCCEEEEe
Confidence 3688 99999999999 1568876654
No 241
>PRK06720 hypothetical protein; Provisional
Probab=43.83 E-value=33 Score=23.47 Aligned_cols=27 Identities=7% Similarity=0.118 Sum_probs=20.1
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecCc
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYKE 45 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~~ 45 (138)
+|. +++|+||++|+ .+.|++-++.+++
T Consensus 15 ~gk-~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~ 49 (169)
T PRK06720 15 AGK-VAIVTGGGIGIGRNTALLLAKQGAKVIVTDID 49 (169)
T ss_pred CCC-EEEEecCCChHHHHHHHHHHHCCCEEEEEECC
Confidence 578 99999999988 1567776655544
No 242
>PRK06180 short chain dehydrogenase; Provisional
Probab=43.61 E-value=31 Score=25.07 Aligned_cols=14 Identities=14% Similarity=-0.002 Sum_probs=12.5
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
.+. ++||+||+|++
T Consensus 3 ~~~-~vlVtGasggi 16 (277)
T PRK06180 3 SMK-TWLITGVSSGF 16 (277)
T ss_pred CCC-EEEEecCCChH
Confidence 467 89999999999
No 243
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=43.54 E-value=26 Score=29.15 Aligned_cols=14 Identities=21% Similarity=0.401 Sum_probs=12.9
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
.|. +|||+||+|.+
T Consensus 249 ~gK-~vLVTGagGSi 262 (588)
T COG1086 249 TGK-TVLVTGGGGSI 262 (588)
T ss_pred CCC-EEEEeCCCCcH
Confidence 689 99999999888
No 244
>PRK12367 short chain dehydrogenase; Provisional
Probab=43.22 E-value=15 Score=26.55 Aligned_cols=14 Identities=21% Similarity=0.282 Sum_probs=12.8
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
+|. ++||+||+|++
T Consensus 13 ~~k-~~lITGas~gI 26 (245)
T PRK12367 13 QGK-RIGITGASGAL 26 (245)
T ss_pred CCC-EEEEEcCCcHH
Confidence 478 99999999999
No 245
>PRK07806 short chain dehydrogenase; Provisional
Probab=43.14 E-value=17 Score=25.78 Aligned_cols=14 Identities=7% Similarity=0.294 Sum_probs=12.7
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
+|. ++||+||+|++
T Consensus 5 ~~k-~vlItGasggi 18 (248)
T PRK07806 5 PGK-TALVTGSSRGI 18 (248)
T ss_pred CCc-EEEEECCCCcH
Confidence 578 99999999999
No 246
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=42.87 E-value=34 Score=24.40 Aligned_cols=14 Identities=21% Similarity=0.439 Sum_probs=12.5
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
.+. ++||+||+|++
T Consensus 5 ~~~-~vlItGas~~i 18 (257)
T PRK07067 5 QGK-VALLTGAASGI 18 (257)
T ss_pred CCC-EEEEeCCCchH
Confidence 467 99999999999
No 247
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=42.56 E-value=35 Score=24.55 Aligned_cols=27 Identities=22% Similarity=0.298 Sum_probs=19.7
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecCc
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYKE 45 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~~ 45 (138)
+|. ++||+||+|++ .+.|+..++..+.
T Consensus 9 ~~k-~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~ 43 (265)
T PRK07097 9 KGK-IALITGASYGIGFAIAKAYAKAGATIVFNDIN 43 (265)
T ss_pred CCC-EEEEeCCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 578 99999999999 1567766554443
No 248
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=42.28 E-value=16 Score=26.18 Aligned_cols=24 Identities=17% Similarity=0.171 Sum_probs=18.3
Q ss_pred CCCeEEEEecCCcce--------eecCCceEee
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFN 42 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~ 42 (138)
+|. ++||+||++|+ .+.|+..++.
T Consensus 7 ~~k-~~lItGas~gIG~aia~~l~~~G~~vv~~ 38 (251)
T PRK12481 7 NGK-VAIITGCNTGLGQGMAIGLAKAGADIVGV 38 (251)
T ss_pred CCC-EEEEeCCCchHHHHHHHHHHHCCCEEEEe
Confidence 588 99999999999 1557765543
No 249
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=41.83 E-value=19 Score=25.52 Aligned_cols=23 Identities=17% Similarity=0.401 Sum_probs=17.8
Q ss_pred CCCeEEEEecCCcce--------eecCCceEe
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAF 41 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi 41 (138)
+|. ++||+||+|++ .+.|+..++
T Consensus 3 ~~~-~vlItGa~g~iG~~~a~~l~~~g~~v~~ 33 (250)
T PRK08063 3 SGK-VALVTGSSRGIGKAIALRLAEEGYDIAV 33 (250)
T ss_pred CCC-EEEEeCCCchHHHHHHHHHHHCCCEEEE
Confidence 578 99999999998 256776554
No 250
>PRK06101 short chain dehydrogenase; Provisional
Probab=41.82 E-value=29 Score=24.57 Aligned_cols=24 Identities=21% Similarity=0.261 Sum_probs=17.0
Q ss_pred EEEEecCCcce--------eecCCceEeecCc
Q 039288 22 YVFISAAFSSV--------YRSGFDDAFNYKE 45 (138)
Q Consensus 22 ~VLI~gaaggv--------~~lGad~vi~~~~ 45 (138)
++||+||+|++ .+.|++-++-.+.
T Consensus 3 ~vlItGas~giG~~la~~L~~~G~~V~~~~r~ 34 (240)
T PRK06101 3 AVLITGATSGIGKQLALDYAKQGWQVIACGRN 34 (240)
T ss_pred EEEEEcCCcHHHHHHHHHHHhCCCEEEEEECC
Confidence 79999999999 1557765554443
No 251
>PRK07856 short chain dehydrogenase; Provisional
Probab=41.45 E-value=17 Score=25.92 Aligned_cols=14 Identities=14% Similarity=0.415 Sum_probs=12.8
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
.|. ++||+||+|++
T Consensus 5 ~~k-~~lItGas~gI 18 (252)
T PRK07856 5 TGR-VVLVTGGTRGI 18 (252)
T ss_pred CCC-EEEEeCCCchH
Confidence 578 99999999999
No 252
>PRK12939 short chain dehydrogenase; Provisional
Probab=41.43 E-value=37 Score=23.91 Aligned_cols=26 Identities=23% Similarity=0.317 Sum_probs=18.5
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecC
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYK 44 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~ 44 (138)
++. ++||+||+|++ .+.|+..++-.+
T Consensus 6 ~~~-~vlItGa~g~iG~~la~~l~~~G~~v~~~~r 39 (250)
T PRK12939 6 AGK-RALVTGAARGLGAAFAEALAEAGATVAFNDG 39 (250)
T ss_pred CCC-EEEEeCCCChHHHHHHHHHHHcCCEEEEEeC
Confidence 578 99999999999 145665544333
No 253
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=41.34 E-value=37 Score=25.42 Aligned_cols=27 Identities=19% Similarity=0.270 Sum_probs=18.9
Q ss_pred CCCeEEEEecCCcce--------eecC-CceEeecCc
Q 039288 18 MGEEYVFISAAFSSV--------YRSG-FDDAFNYKE 45 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lG-ad~vi~~~~ 45 (138)
.+. ++||+||++|+ .+.| ++-++..+.
T Consensus 2 ~~k-~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~ 37 (314)
T TIGR01289 2 QKP-TVIITGASSGLGLYAAKALAATGEWHVIMACRD 37 (314)
T ss_pred CCC-EEEEECCCChHHHHHHHHHHHcCCCEEEEEeCC
Confidence 367 89999999999 1557 555554443
No 254
>PRK06182 short chain dehydrogenase; Validated
Probab=41.11 E-value=37 Score=24.53 Aligned_cols=14 Identities=14% Similarity=0.252 Sum_probs=12.5
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
++. +++|+||+|++
T Consensus 2 ~~k-~vlItGasggi 15 (273)
T PRK06182 2 QKK-VALVTGASSGI 15 (273)
T ss_pred CCC-EEEEECCCChH
Confidence 467 99999999999
No 255
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=41.00 E-value=20 Score=26.97 Aligned_cols=14 Identities=7% Similarity=-0.009 Sum_probs=12.6
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
+|. +|||+||+|.+
T Consensus 5 ~~~-~vlVTGatGfi 18 (340)
T PLN02653 5 PRK-VALITGITGQD 18 (340)
T ss_pred CCC-EEEEECCCCcc
Confidence 468 99999999999
No 256
>PRK08278 short chain dehydrogenase; Provisional
Probab=40.87 E-value=24 Score=25.64 Aligned_cols=26 Identities=27% Similarity=0.382 Sum_probs=19.0
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecC
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYK 44 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~ 44 (138)
+|. ++||+||+|++ .+.|+.-++-++
T Consensus 5 ~~k-~vlItGas~gIG~~ia~~l~~~G~~V~~~~r 38 (273)
T PRK08278 5 SGK-TLFITGASRGIGLAIALRAARDGANIVIAAK 38 (273)
T ss_pred CCC-EEEEECCCchHHHHHHHHHHHCCCEEEEEec
Confidence 568 99999999999 155776555444
No 257
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=40.04 E-value=38 Score=24.20 Aligned_cols=22 Identities=23% Similarity=0.227 Sum_probs=15.0
Q ss_pred HHhhcCCCCCCeEEEEecCCcce
Q 039288 10 LFENFSPKMGEEYVFISAAFSSV 32 (138)
Q Consensus 10 L~~~~~~~~g~~~VLI~gaaggv 32 (138)
+.+...++||+ +||-.|+.+|-
T Consensus 64 ~l~~L~l~pg~-~VLeIGtGsGY 85 (209)
T PF01135_consen 64 MLEALDLKPGD-RVLEIGTGSGY 85 (209)
T ss_dssp HHHHTTC-TT--EEEEES-TTSH
T ss_pred HHHHHhcCCCC-EEEEecCCCcH
Confidence 34567799999 99999987666
No 258
>PRK12747 short chain dehydrogenase; Provisional
Probab=39.87 E-value=20 Score=25.53 Aligned_cols=24 Identities=17% Similarity=0.224 Sum_probs=18.5
Q ss_pred CCCeEEEEecCCcce--------eecCCceEee
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFN 42 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~ 42 (138)
+|. ++||+||+|++ .+.|+..++.
T Consensus 3 ~~k-~~lItGas~gIG~~ia~~l~~~G~~v~~~ 34 (252)
T PRK12747 3 KGK-VALVTGASRGIGRAIAKRLANDGALVAIH 34 (252)
T ss_pred CCC-EEEEeCCCChHHHHHHHHHHHCCCeEEEE
Confidence 478 99999999999 1567766553
No 259
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=39.73 E-value=26 Score=26.10 Aligned_cols=26 Identities=19% Similarity=0.198 Sum_probs=20.2
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecC
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYK 44 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~ 44 (138)
+|. ++||+||+|++ .+.|+..++...
T Consensus 11 ~~k-~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~ 44 (306)
T PRK07792 11 SGK-VAVVTGAAAGLGRAEALGLARLGATVVVNDV 44 (306)
T ss_pred CCC-EEEEECCCChHHHHHHHHHHHCCCEEEEecC
Confidence 578 99999999999 156887666543
No 260
>PRK06484 short chain dehydrogenase; Validated
Probab=39.69 E-value=35 Score=27.35 Aligned_cols=26 Identities=15% Similarity=0.216 Sum_probs=18.7
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecC
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYK 44 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~ 44 (138)
+|. ++||+||++|+ .+.|+.-++-.+
T Consensus 4 ~~k-~~lITGas~gIG~aia~~l~~~G~~V~~~~r 37 (520)
T PRK06484 4 QSR-VVLVTGAAGGIGRAACQRFARAGDQVVVADR 37 (520)
T ss_pred CCe-EEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 688 99999999999 155665444433
No 261
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=39.40 E-value=36 Score=24.03 Aligned_cols=13 Identities=23% Similarity=0.485 Sum_probs=11.3
Q ss_pred CCeEEEEecCCcce
Q 039288 19 GEEYVFISAAFSSV 32 (138)
Q Consensus 19 g~~~VLI~gaaggv 32 (138)
+. ++||+||+|++
T Consensus 1 ~~-~vlItGa~g~l 13 (255)
T TIGR01963 1 GK-TALVTGAASGI 13 (255)
T ss_pred CC-EEEEcCCcchH
Confidence 35 89999999999
No 262
>PRK07074 short chain dehydrogenase; Provisional
Probab=39.12 E-value=42 Score=23.91 Aligned_cols=13 Identities=8% Similarity=0.222 Sum_probs=11.7
Q ss_pred CCeEEEEecCCcce
Q 039288 19 GEEYVFISAAFSSV 32 (138)
Q Consensus 19 g~~~VLI~gaaggv 32 (138)
+. ++||+||+|++
T Consensus 2 ~k-~ilItGat~~i 14 (257)
T PRK07074 2 KR-TALVTGAAGGI 14 (257)
T ss_pred CC-EEEEECCcchH
Confidence 56 89999999999
No 263
>PRK08267 short chain dehydrogenase; Provisional
Probab=39.12 E-value=35 Score=24.35 Aligned_cols=11 Identities=36% Similarity=0.606 Sum_probs=10.2
Q ss_pred EEEEecCCcce
Q 039288 22 YVFISAAFSSV 32 (138)
Q Consensus 22 ~VLI~gaaggv 32 (138)
++||+||+|++
T Consensus 3 ~vlItGasg~i 13 (260)
T PRK08267 3 SIFITGAASGI 13 (260)
T ss_pred EEEEeCCCchH
Confidence 79999999998
No 264
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=38.67 E-value=39 Score=24.11 Aligned_cols=25 Identities=8% Similarity=0.082 Sum_probs=17.7
Q ss_pred CCeEEEEecCCcce--------eecCCceEeecC
Q 039288 19 GEEYVFISAAFSSV--------YRSGFDDAFNYK 44 (138)
Q Consensus 19 g~~~VLI~gaaggv--------~~lGad~vi~~~ 44 (138)
+. ++||+||+|++ .+.|++.++-.+
T Consensus 2 ~k-~ilItG~~~~IG~~la~~l~~~g~~vi~~~r 34 (259)
T PRK12384 2 NQ-VAVVIGGGQTLGAFLCHGLAEEGYRVAVADI 34 (259)
T ss_pred CC-EEEEECCCcHHHHHHHHHHHHCCCEEEEEEC
Confidence 56 89999999998 155766555433
No 265
>PRK12937 short chain dehydrogenase; Provisional
Probab=37.94 E-value=21 Score=25.09 Aligned_cols=26 Identities=23% Similarity=0.386 Sum_probs=19.2
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecC
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYK 44 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~ 44 (138)
++. ++||+||+|++ .+.|++.++.++
T Consensus 4 ~~~-~vlItG~~~~iG~~la~~l~~~g~~v~~~~~ 37 (245)
T PRK12937 4 SNK-VAIVTGASRGIGAAIARRLAADGFAVAVNYA 37 (245)
T ss_pred CCC-EEEEeCCCchHHHHHHHHHHHCCCEEEEecC
Confidence 567 99999999999 155776655443
No 266
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=37.62 E-value=22 Score=25.25 Aligned_cols=14 Identities=21% Similarity=0.437 Sum_probs=12.5
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
++. +|||+||+|++
T Consensus 3 ~~~-~vlItG~sg~i 16 (258)
T PRK12429 3 KGK-VALVTGAASGI 16 (258)
T ss_pred CCC-EEEEECCCchH
Confidence 467 99999999999
No 267
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=37.55 E-value=21 Score=25.13 Aligned_cols=14 Identities=7% Similarity=0.207 Sum_probs=12.7
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
+|. ++||+||+|++
T Consensus 4 ~~~-~~lItG~~g~i 17 (253)
T PRK08217 4 KDK-VIVITGGAQGL 17 (253)
T ss_pred CCC-EEEEECCCchH
Confidence 578 99999999999
No 268
>PRK05693 short chain dehydrogenase; Provisional
Probab=36.72 E-value=38 Score=24.48 Aligned_cols=11 Identities=27% Similarity=0.416 Sum_probs=10.2
Q ss_pred EEEEecCCcce
Q 039288 22 YVFISAAFSSV 32 (138)
Q Consensus 22 ~VLI~gaaggv 32 (138)
++||+||+|++
T Consensus 3 ~vlItGasggi 13 (274)
T PRK05693 3 VVLITGCSSGI 13 (274)
T ss_pred EEEEecCCChH
Confidence 79999999999
No 269
>PRK09135 pteridine reductase; Provisional
Probab=36.72 E-value=23 Score=24.89 Aligned_cols=24 Identities=13% Similarity=0.274 Sum_probs=17.7
Q ss_pred CCCeEEEEecCCcce--------eecCCceEee
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFN 42 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~ 42 (138)
.+. ++||+||+|++ .+.|+..++-
T Consensus 5 ~~~-~vlItGa~g~iG~~l~~~l~~~g~~v~~~ 36 (249)
T PRK09135 5 SAK-VALITGGARRIGAAIARTLHAAGYRVAIH 36 (249)
T ss_pred CCC-EEEEeCCCchHHHHHHHHHHHCCCEEEEE
Confidence 567 99999999999 1557655443
No 270
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=36.70 E-value=38 Score=24.28 Aligned_cols=24 Identities=13% Similarity=0.282 Sum_probs=16.7
Q ss_pred EEEEecCCcce-------e-ecCCceEeecCc
Q 039288 22 YVFISAAFSSV-------Y-RSGFDDAFNYKE 45 (138)
Q Consensus 22 ~VLI~gaaggv-------~-~lGad~vi~~~~ 45 (138)
++||+||+|++ + +.|+.-++..++
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~ 33 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRN 33 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCC
Confidence 69999999999 1 456665554443
No 271
>PRK08264 short chain dehydrogenase; Validated
Probab=36.55 E-value=23 Score=24.90 Aligned_cols=14 Identities=21% Similarity=0.439 Sum_probs=12.5
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
.+. ++||+||+|++
T Consensus 5 ~~~-~vlItGgsg~i 18 (238)
T PRK08264 5 KGK-VVLVTGANRGI 18 (238)
T ss_pred CCC-EEEEECCCchH
Confidence 467 89999999999
No 272
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=36.48 E-value=23 Score=25.04 Aligned_cols=25 Identities=16% Similarity=0.356 Sum_probs=18.9
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeec
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNY 43 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~ 43 (138)
++. ++||+||+|++ .+.|+..++..
T Consensus 5 ~~~-~~lItG~s~~iG~~la~~l~~~g~~v~~~~ 37 (247)
T PRK12935 5 NGK-VAIVTGGAKGIGKAITVALAQEGAKVVINY 37 (247)
T ss_pred CCC-EEEEECCCCHHHHHHHHHHHHcCCEEEEEc
Confidence 478 99999999999 15577665543
No 273
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=36.44 E-value=24 Score=24.93 Aligned_cols=23 Identities=9% Similarity=0.343 Sum_probs=17.8
Q ss_pred CCCeEEEEecCCcce--------eecCCceEe
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAF 41 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi 41 (138)
+|. ++||+||+|++ .+.|+..++
T Consensus 2 ~~k-~~lVtG~s~giG~~~a~~l~~~G~~vv~ 32 (246)
T PRK12938 2 SQR-IAYVTGGMGGIGTSICQRLHKDGFKVVA 32 (246)
T ss_pred CCC-EEEEECCCChHHHHHHHHHHHcCCEEEE
Confidence 467 89999999999 156776655
No 274
>PRK08017 oxidoreductase; Provisional
Probab=36.29 E-value=42 Score=23.80 Aligned_cols=11 Identities=27% Similarity=0.392 Sum_probs=10.3
Q ss_pred EEEEecCCcce
Q 039288 22 YVFISAAFSSV 32 (138)
Q Consensus 22 ~VLI~gaaggv 32 (138)
++||+||+|++
T Consensus 4 ~vlVtGasg~I 14 (256)
T PRK08017 4 SVLITGCSSGI 14 (256)
T ss_pred EEEEECCCChH
Confidence 79999999998
No 275
>PRK07326 short chain dehydrogenase; Provisional
Probab=36.08 E-value=26 Score=24.59 Aligned_cols=14 Identities=14% Similarity=0.351 Sum_probs=12.5
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
++. ++||+||+|++
T Consensus 5 ~~~-~ilItGatg~i 18 (237)
T PRK07326 5 KGK-VALITGGSKGI 18 (237)
T ss_pred CCC-EEEEECCCCcH
Confidence 468 99999999999
No 276
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=35.95 E-value=24 Score=24.67 Aligned_cols=14 Identities=14% Similarity=0.358 Sum_probs=12.5
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
++. ++||+||+|++
T Consensus 4 ~~~-~ilItGasg~i 17 (246)
T PRK05653 4 QGK-TALVTGASRGI 17 (246)
T ss_pred CCC-EEEEECCCcHH
Confidence 467 99999999998
No 277
>PRK08263 short chain dehydrogenase; Provisional
Probab=35.94 E-value=47 Score=24.05 Aligned_cols=13 Identities=23% Similarity=0.248 Sum_probs=11.7
Q ss_pred CCeEEEEecCCcce
Q 039288 19 GEEYVFISAAFSSV 32 (138)
Q Consensus 19 g~~~VLI~gaaggv 32 (138)
+. +|||+||+|++
T Consensus 3 ~k-~vlItGasg~i 15 (275)
T PRK08263 3 EK-VWFITGASRGF 15 (275)
T ss_pred CC-EEEEeCCCChH
Confidence 56 89999999999
No 278
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=35.90 E-value=23 Score=26.67 Aligned_cols=14 Identities=14% Similarity=0.230 Sum_probs=12.6
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
+|. +|||+||+|.+
T Consensus 3 ~~k-~vLVTGatG~I 16 (324)
T TIGR03589 3 NNK-SILITGGTGSF 16 (324)
T ss_pred CCC-EEEEeCCCCHH
Confidence 478 99999999998
No 279
>cd04493 BRCA2DBD_OB1 BRCA2DBD_OB1: A subfamily of OB folds corresponding to the first OB fold (OB1) of the 800-amino acid C-terminal ssDNA binding domain (DBD) of BRCA2 (breast cancer susceptibility gene 2) protein, called BRCA2DBD. BRCA2 participates in homologous recombination-mediated repair of double-strand DNA breaks. It stimulates the displacement of Replication protein A (RPA), the most abundant eukaryotic ssDNA binding protein. It also facilitates filament formation. Mutations that map throughout the BRCA2 protein are associated with breast cancer susceptibility. BRCA2 is a large nuclear protein and its most conserved region is the C-terminal BRCA2DBD. BRCA2DBD binds ssDNA in vitro, and is composed of five structural domains, three of which are OB folds (OB1, OB2, and OB3). BRCA2DBD OB2 and OB3 are arranged in tandem, and their mode of binding can be considered qualitatively similar to two OB folds of RPA1, DBD-A and DBD-B (the major DBDs of RPA). BRCA2DBD OB1 binds DNA weakly.
Probab=35.90 E-value=43 Score=21.18 Aligned_cols=20 Identities=25% Similarity=0.233 Sum_probs=16.5
Q ss_pred HHHhhcCCCCCCeEEEEecCC
Q 039288 9 NLFENFSPKMGEEYVFISAAF 29 (138)
Q Consensus 9 ~L~~~~~~~~g~~~VLI~gaa 29 (138)
.+.+.+++..|+ ++.|+||.
T Consensus 44 ~~l~~gkl~vGq-KL~i~GA~ 63 (100)
T cd04493 44 NLVRKGKLRVGQ-KLRICGAE 63 (100)
T ss_pred HHHHcCCeeccc-EEEEECce
Confidence 345678899999 99999983
No 280
>PRK09134 short chain dehydrogenase; Provisional
Probab=35.86 E-value=25 Score=25.15 Aligned_cols=23 Identities=22% Similarity=0.303 Sum_probs=17.5
Q ss_pred CCCeEEEEecCCcce--------eecCCceEe
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAF 41 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi 41 (138)
.+. ++||+||+|++ .+.|++.++
T Consensus 8 ~~k-~vlItGas~giG~~la~~l~~~g~~v~~ 38 (258)
T PRK09134 8 APR-AALVTGAARRIGRAIALDLAAHGFDVAV 38 (258)
T ss_pred CCC-EEEEeCCCcHHHHHHHHHHHHCCCEEEE
Confidence 578 99999999999 155765544
No 281
>PRK08324 short chain dehydrogenase; Validated
Probab=35.85 E-value=41 Score=28.33 Aligned_cols=14 Identities=14% Similarity=0.411 Sum_probs=13.0
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
+|+ +|||+||+|++
T Consensus 421 ~gk-~vLVTGasggI 434 (681)
T PRK08324 421 AGK-VALVTGAAGGI 434 (681)
T ss_pred CCC-EEEEecCCCHH
Confidence 689 99999999999
No 282
>PRK07454 short chain dehydrogenase; Provisional
Probab=35.71 E-value=60 Score=22.80 Aligned_cols=15 Identities=20% Similarity=0.158 Sum_probs=12.9
Q ss_pred CCCCeEEEEecCCcce
Q 039288 17 KMGEEYVFISAAFSSV 32 (138)
Q Consensus 17 ~~g~~~VLI~gaaggv 32 (138)
..+. ++||+||+|++
T Consensus 4 ~~~k-~vlItG~sg~i 18 (241)
T PRK07454 4 NSMP-RALITGASSGI 18 (241)
T ss_pred CCCC-EEEEeCCCchH
Confidence 4567 89999999998
No 283
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=35.60 E-value=15 Score=28.93 Aligned_cols=19 Identities=5% Similarity=0.043 Sum_probs=16.5
Q ss_pred hcCCCCCCeEEE----EecCCcce
Q 039288 13 NFSPKMGEEYVF----ISAAFSSV 32 (138)
Q Consensus 13 ~~~~~~g~~~VL----I~gaaggv 32 (138)
..++++|| .+| ||||+|++
T Consensus 28 l~~~~~~~-~~~~~~~l~~~~~g~ 50 (450)
T PRK08261 28 LRRYRPGQ-PLLDGPVLVGGAGRL 50 (450)
T ss_pred ccCCCCCC-CCCCCceEEccCchh
Confidence 45778999 999 99999988
No 284
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=35.51 E-value=25 Score=24.83 Aligned_cols=24 Identities=17% Similarity=0.219 Sum_probs=18.0
Q ss_pred CCCeEEEEecCCcce--------eecCCceEee
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFN 42 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~ 42 (138)
++. ++||+||+|++ .+.|++.++.
T Consensus 4 ~~k-~ilItGas~gIG~~la~~l~~~G~~vv~~ 35 (253)
T PRK08642 4 SEQ-TVLVTGGSRGLGAAIARAFAREGARVVVN 35 (253)
T ss_pred CCC-EEEEeCCCCcHHHHHHHHHHHCCCeEEEE
Confidence 357 89999999999 1557766554
No 285
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=35.00 E-value=48 Score=23.91 Aligned_cols=26 Identities=19% Similarity=0.324 Sum_probs=19.0
Q ss_pred CCCeEEEEecCC--cce-------e-ecCCceEeecC
Q 039288 18 MGEEYVFISAAF--SSV-------Y-RSGFDDAFNYK 44 (138)
Q Consensus 18 ~g~~~VLI~gaa--ggv-------~-~lGad~vi~~~ 44 (138)
.|. ++||+||+ +|+ + +.|+.-++.++
T Consensus 6 ~~k-~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r 41 (257)
T PRK08594 6 EGK-TYVVMGVANKRSIAWGIARSLHNAGAKLVFTYA 41 (257)
T ss_pred CCC-EEEEECCCCCCCHHHHHHHHHHHCCCEEEEecC
Confidence 578 99999997 788 1 56876665543
No 286
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=35.00 E-value=53 Score=22.97 Aligned_cols=23 Identities=13% Similarity=0.289 Sum_probs=17.4
Q ss_pred CCeEEEEecCCcce--------eecCCceEee
Q 039288 19 GEEYVFISAAFSSV--------YRSGFDDAFN 42 (138)
Q Consensus 19 g~~~VLI~gaaggv--------~~lGad~vi~ 42 (138)
+. ++||+||+|++ .+.|++.++-
T Consensus 5 ~~-~ilI~Gasg~iG~~la~~l~~~g~~v~~~ 35 (247)
T PRK05565 5 GK-VAIVTGASGGIGRAIAELLAKEGAKVVIA 35 (247)
T ss_pred CC-EEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence 57 89999999999 1457766554
No 287
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=34.78 E-value=27 Score=24.98 Aligned_cols=25 Identities=24% Similarity=0.389 Sum_probs=18.4
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeec
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNY 43 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~ 43 (138)
.|. ++||+||+|++ .+.|++.++..
T Consensus 6 ~~k-~~lItGas~gIG~~~a~~l~~~G~~v~~~~ 38 (255)
T PRK06463 6 KGK-VALITGGTRGIGRAIAEAFLREGAKVAVLY 38 (255)
T ss_pred CCC-EEEEeCCCChHHHHHHHHHHHCCCEEEEEe
Confidence 478 99999999999 15576655543
No 288
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=34.72 E-value=26 Score=24.57 Aligned_cols=14 Identities=14% Similarity=0.340 Sum_probs=12.6
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
++. ++||+||+|++
T Consensus 5 ~~~-~vlItGa~g~i 18 (245)
T PRK12936 5 SGR-KALVTGASGGI 18 (245)
T ss_pred CCC-EEEEECCCChH
Confidence 467 99999999999
No 289
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=34.15 E-value=47 Score=28.06 Aligned_cols=27 Identities=7% Similarity=0.112 Sum_probs=19.8
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecCc
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYKE 45 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~~ 45 (138)
+|. ++||+||+|++ .+.|+.-++..++
T Consensus 413 ~gk-vvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~ 447 (676)
T TIGR02632 413 ARR-VAFVTGGAGGIGRETARRLAAEGAHVVLADLN 447 (676)
T ss_pred CCC-EEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCC
Confidence 478 99999999999 2567765554443
No 290
>smart00739 KOW KOW (Kyprides, Ouzounis, Woese) motif. Motif in ribosomal proteins, NusG, Spt5p, KIN17 and T54.
Probab=34.08 E-value=44 Score=14.90 Aligned_cols=13 Identities=23% Similarity=0.181 Sum_probs=9.9
Q ss_pred CCCCCeEEEEecCC
Q 039288 16 PKMGEEYVFISAAF 29 (138)
Q Consensus 16 ~~~g~~~VLI~gaa 29 (138)
+++|+ .|.|.++.
T Consensus 2 ~~~G~-~V~I~~G~ 14 (28)
T smart00739 2 FEVGD-TVRVIAGP 14 (28)
T ss_pred CCCCC-EEEEeECC
Confidence 56889 88888753
No 291
>PRK12746 short chain dehydrogenase; Provisional
Probab=33.73 E-value=28 Score=24.72 Aligned_cols=23 Identities=17% Similarity=0.193 Sum_probs=17.2
Q ss_pred CCCeEEEEecCCcce--------eecCCceEe
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAF 41 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi 41 (138)
++. +++|+||+|++ .+.|+..++
T Consensus 5 ~~~-~ilItGasg~iG~~la~~l~~~G~~v~i 35 (254)
T PRK12746 5 DGK-VALVTGASRGIGRAIAMRLANDGALVAI 35 (254)
T ss_pred CCC-EEEEeCCCchHHHHHHHHHHHCCCEEEE
Confidence 467 99999999999 145665544
No 292
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=33.65 E-value=25 Score=26.21 Aligned_cols=14 Identities=21% Similarity=0.290 Sum_probs=12.6
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
.|. +|||+||+|.+
T Consensus 4 ~~k-~vlVtG~~G~I 17 (325)
T PLN02989 4 GGK-VVCVTGASGYI 17 (325)
T ss_pred CCC-EEEEECCchHH
Confidence 478 99999999988
No 293
>PRK06953 short chain dehydrogenase; Provisional
Probab=33.29 E-value=57 Score=22.71 Aligned_cols=11 Identities=27% Similarity=0.301 Sum_probs=10.1
Q ss_pred EEEEecCCcce
Q 039288 22 YVFISAAFSSV 32 (138)
Q Consensus 22 ~VLI~gaaggv 32 (138)
++||+||+|++
T Consensus 3 ~vlvtG~sg~i 13 (222)
T PRK06953 3 TVLIVGASRGI 13 (222)
T ss_pred eEEEEcCCCch
Confidence 79999999998
No 294
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=33.25 E-value=24 Score=23.19 Aligned_cols=20 Identities=30% Similarity=0.323 Sum_probs=15.3
Q ss_pred EEEEecCCcce--------eecCCceEe
Q 039288 22 YVFISAAFSSV--------YRSGFDDAF 41 (138)
Q Consensus 22 ~VLI~gaaggv--------~~lGad~vi 41 (138)
++||+||+||+ .+.|+.+|+
T Consensus 2 ~~lItGa~~giG~~~a~~l~~~g~~~v~ 29 (167)
T PF00106_consen 2 TVLITGASSGIGRALARALARRGARVVI 29 (167)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTTEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHhcCceEEE
Confidence 79999999999 144675655
No 295
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=33.06 E-value=29 Score=24.31 Aligned_cols=26 Identities=19% Similarity=0.362 Sum_probs=18.4
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecC
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYK 44 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~ 44 (138)
++. ++||+||+|++ .+.|++.++-.+
T Consensus 4 ~~~-~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~ 37 (248)
T PRK05557 4 EGK-VALVTGASRGIGRAIAERLAAQGANVVINYA 37 (248)
T ss_pred CCC-EEEEECCCchHHHHHHHHHHHCCCEEEEEeC
Confidence 457 89999999999 145776545443
No 296
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=32.62 E-value=57 Score=24.60 Aligned_cols=23 Identities=17% Similarity=0.225 Sum_probs=19.5
Q ss_pred CCCeEEEEecC--Ccce-------e-ecCCceEe
Q 039288 18 MGEEYVFISAA--FSSV-------Y-RSGFDDAF 41 (138)
Q Consensus 18 ~g~~~VLI~ga--aggv-------~-~lGad~vi 41 (138)
.|. ++||+|| ++|+ + +.|+..|+
T Consensus 8 ~gk-~alITGa~~s~GIG~a~A~~la~~Ga~Vv~ 40 (303)
T PLN02730 8 RGK-RAFIAGVADDNGYGWAIAKALAAAGAEILV 40 (303)
T ss_pred CCC-EEEEeCCCCCCcHHHHHHHHHHHCCCEEEE
Confidence 689 9999999 7888 2 67998887
No 297
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=32.61 E-value=30 Score=26.20 Aligned_cols=14 Identities=14% Similarity=0.195 Sum_probs=12.5
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
+|. +|||+||+|.+
T Consensus 3 ~~k-~ilItGatG~I 16 (349)
T TIGR02622 3 QGK-KVLVTGHTGFK 16 (349)
T ss_pred CCC-EEEEECCCChh
Confidence 478 99999999988
No 298
>COG5443 FlbT Flagellar biosynthesis regulator FlbT [Cell motility and secretion]
Probab=32.58 E-value=30 Score=23.03 Aligned_cols=14 Identities=50% Similarity=0.660 Sum_probs=12.2
Q ss_pred cCCCCCCeEEEEecC
Q 039288 14 FSPKMGEEYVFISAA 28 (138)
Q Consensus 14 ~~~~~g~~~VLI~ga 28 (138)
-.++||| +++|.||
T Consensus 7 iSLk~gE-ki~iNGA 20 (148)
T COG5443 7 ISLKPGE-KIFINGA 20 (148)
T ss_pred EeecCCC-EEEEecc
Confidence 3578999 9999987
No 299
>PRK07577 short chain dehydrogenase; Provisional
Probab=32.54 E-value=31 Score=24.10 Aligned_cols=14 Identities=14% Similarity=0.283 Sum_probs=12.4
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
++. ++||+||+|++
T Consensus 2 ~~k-~vlItG~s~~i 15 (234)
T PRK07577 2 SSR-TVLVTGATKGI 15 (234)
T ss_pred CCC-EEEEECCCCcH
Confidence 467 89999999999
No 300
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=32.48 E-value=30 Score=24.74 Aligned_cols=14 Identities=7% Similarity=0.233 Sum_probs=12.8
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
+|. ++||+||+|++
T Consensus 9 ~~k-~~lItG~~~gI 22 (253)
T PRK08993 9 EGK-VAVVTGCDTGL 22 (253)
T ss_pred CCC-EEEEECCCchH
Confidence 478 99999999999
No 301
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=32.27 E-value=30 Score=24.19 Aligned_cols=14 Identities=21% Similarity=0.465 Sum_probs=12.3
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
+.. ++||+||+|++
T Consensus 5 ~~~-~vlItGasg~i 18 (249)
T PRK12825 5 MGR-VALVTGAARGL 18 (249)
T ss_pred CCC-EEEEeCCCchH
Confidence 457 89999999999
No 302
>PRK12827 short chain dehydrogenase; Provisional
Probab=31.94 E-value=32 Score=24.17 Aligned_cols=23 Identities=17% Similarity=0.158 Sum_probs=17.6
Q ss_pred CCCeEEEEecCCcce--------eecCCceEe
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAF 41 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi 41 (138)
++. ++||+||+|++ .+.|++.++
T Consensus 5 ~~~-~ilItGasg~iG~~la~~l~~~g~~v~~ 35 (249)
T PRK12827 5 DSR-RVLITGGSGGLGRAIAVRLAADGADVIV 35 (249)
T ss_pred CCC-EEEEECCCChHHHHHHHHHHHCCCeEEE
Confidence 467 89999999999 155776655
No 303
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=31.74 E-value=29 Score=27.48 Aligned_cols=14 Identities=21% Similarity=0.335 Sum_probs=13.0
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
+|. +++|+||+|++
T Consensus 177 ~gK-~VLITGASgGI 190 (406)
T PRK07424 177 KGK-TVAVTGASGTL 190 (406)
T ss_pred CCC-EEEEeCCCCHH
Confidence 588 99999999999
No 304
>PRK07102 short chain dehydrogenase; Provisional
Probab=31.70 E-value=59 Score=22.93 Aligned_cols=23 Identities=17% Similarity=0.147 Sum_probs=16.1
Q ss_pred EEEEecCCcce--------eecCCceEeecC
Q 039288 22 YVFISAAFSSV--------YRSGFDDAFNYK 44 (138)
Q Consensus 22 ~VLI~gaaggv--------~~lGad~vi~~~ 44 (138)
+++|+||+|++ .+.|++-++-.+
T Consensus 3 ~vlItGas~giG~~~a~~l~~~G~~Vi~~~r 33 (243)
T PRK07102 3 KILIIGATSDIARACARRYAAAGARLYLAAR 33 (243)
T ss_pred EEEEEcCCcHHHHHHHHHHHhcCCEEEEEeC
Confidence 79999999999 155765444333
No 305
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=31.60 E-value=57 Score=23.16 Aligned_cols=24 Identities=13% Similarity=0.185 Sum_probs=16.1
Q ss_pred EEEEecCCcce--------eecCCceEeecCc
Q 039288 22 YVFISAAFSSV--------YRSGFDDAFNYKE 45 (138)
Q Consensus 22 ~VLI~gaaggv--------~~lGad~vi~~~~ 45 (138)
++||.||+|++ .+.|++.++-.+.
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~ 33 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRR 33 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEECC
Confidence 78999999998 1456654443333
No 306
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=31.08 E-value=32 Score=24.23 Aligned_cols=27 Identities=11% Similarity=0.070 Sum_probs=18.7
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecCc
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYKE 45 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~~ 45 (138)
.+. ++||+||+|++ .+.|+..++-.+.
T Consensus 5 ~~~-~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~ 39 (251)
T PRK12826 5 EGR-VALVTGAARGIGRAIAVRLAADGAEVIVVDIC 39 (251)
T ss_pred CCC-EEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 578 99999999998 1456654444443
No 307
>PLN02572 UDP-sulfoquinovose synthase
Probab=30.97 E-value=30 Score=27.51 Aligned_cols=14 Identities=7% Similarity=-0.047 Sum_probs=12.8
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
+++ +|||+||+|.+
T Consensus 46 ~~k-~VLVTGatGfI 59 (442)
T PLN02572 46 KKK-KVMVIGGDGYC 59 (442)
T ss_pred cCC-EEEEECCCcHH
Confidence 578 99999999998
No 308
>PF14805 THDPS_N_2: Tetrahydrodipicolinate N-succinyltransferase N-terminal; PDB: 3EG4_A 3TDT_A 2TDT_A 1KGT_A 1TDT_A 1KGQ_A 3BXY_A 3GOS_A 3TK8_A.
Probab=30.74 E-value=78 Score=18.57 Aligned_cols=24 Identities=8% Similarity=0.075 Sum_probs=19.1
Q ss_pred hHHHHHHHHHHHHHhCCceeceee
Q 039288 110 VYPEFLEMILPYIREKARLSMRKA 133 (138)
Q Consensus 110 ~~~~~~~~~~~~~~~g~l~~~~~~ 133 (138)
..+++..++++++++|+++..++.
T Consensus 25 ~~~~av~~~i~~Ld~G~lRvAek~ 48 (70)
T PF14805_consen 25 ELRDAVEEVIELLDSGELRVAEKD 48 (70)
T ss_dssp HHHHHHHHHHHHHHTTSS-SEEEE
T ss_pred HHHHHHHHHHHHhcCCCeEEEeec
Confidence 567788999999999999876653
No 309
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=30.52 E-value=35 Score=24.11 Aligned_cols=25 Identities=12% Similarity=0.082 Sum_probs=18.4
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeec
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNY 43 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~ 43 (138)
.+. ++||+||+|++ .+.|++.++..
T Consensus 5 ~~~-~vlitGasg~iG~~l~~~l~~~g~~v~~~~ 37 (252)
T PRK06077 5 KDK-VVVVTGSGRGIGRAIAVRLAKEGSLVVVNA 37 (252)
T ss_pred CCc-EEEEeCCCChHHHHHHHHHHHCCCEEEEEe
Confidence 367 99999999999 15577655543
No 310
>PRK05599 hypothetical protein; Provisional
Probab=30.49 E-value=55 Score=23.35 Aligned_cols=24 Identities=17% Similarity=0.203 Sum_probs=15.9
Q ss_pred EEEEecCCcce-------eecCCceEeecCc
Q 039288 22 YVFISAAFSSV-------YRSGFDDAFNYKE 45 (138)
Q Consensus 22 ~VLI~gaaggv-------~~lGad~vi~~~~ 45 (138)
++||+||++|+ +..|+.-++-.++
T Consensus 2 ~vlItGas~GIG~aia~~l~~g~~Vil~~r~ 32 (246)
T PRK05599 2 SILILGGTSDIAGEIATLLCHGEDVVLAARR 32 (246)
T ss_pred eEEEEeCccHHHHHHHHHHhCCCEEEEEeCC
Confidence 68999999999 2336555554443
No 311
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=30.45 E-value=31 Score=25.63 Aligned_cols=14 Identities=21% Similarity=0.316 Sum_probs=12.7
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
.|. +|||+||+|.+
T Consensus 4 ~~~-~vlVTGatG~i 17 (322)
T PLN02986 4 GGK-LVCVTGASGYI 17 (322)
T ss_pred CCC-EEEEECCCcHH
Confidence 578 99999999988
No 312
>PLN02583 cinnamoyl-CoA reductase
Probab=30.05 E-value=35 Score=25.28 Aligned_cols=14 Identities=21% Similarity=0.093 Sum_probs=12.4
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
++. +|||+||+|.+
T Consensus 5 ~~k-~vlVTGatG~I 18 (297)
T PLN02583 5 SSK-SVCVMDASGYV 18 (297)
T ss_pred CCC-EEEEECCCCHH
Confidence 567 89999999988
No 313
>PRK06701 short chain dehydrogenase; Provisional
Probab=30.00 E-value=33 Score=25.32 Aligned_cols=24 Identities=25% Similarity=0.411 Sum_probs=17.8
Q ss_pred CCCeEEEEecCCcce-------e-ecCCceEee
Q 039288 18 MGEEYVFISAAFSSV-------Y-RSGFDDAFN 42 (138)
Q Consensus 18 ~g~~~VLI~gaaggv-------~-~lGad~vi~ 42 (138)
+|. ++||+||+|++ + +.|+..++-
T Consensus 45 ~~k-~iLItGasggIG~~la~~l~~~G~~V~l~ 76 (290)
T PRK06701 45 KGK-VALITGGDSGIGRAVAVLFAKEGADIAIV 76 (290)
T ss_pred CCC-EEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence 578 99999999999 1 457664443
No 314
>PRK07832 short chain dehydrogenase; Provisional
Probab=30.00 E-value=60 Score=23.46 Aligned_cols=20 Identities=20% Similarity=0.271 Sum_probs=14.7
Q ss_pred EEEEecCCcce--------eecCCceEe
Q 039288 22 YVFISAAFSSV--------YRSGFDDAF 41 (138)
Q Consensus 22 ~VLI~gaaggv--------~~lGad~vi 41 (138)
++||+||+|++ .+.|+..++
T Consensus 2 ~vlItGas~giG~~la~~la~~G~~vv~ 29 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGAELFL 29 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEE
Confidence 68999999999 145666444
No 315
>PRK06198 short chain dehydrogenase; Provisional
Probab=29.92 E-value=34 Score=24.39 Aligned_cols=22 Identities=9% Similarity=0.191 Sum_probs=17.0
Q ss_pred CCCeEEEEecCCcce--------eecCCceE
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDA 40 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~v 40 (138)
++. +++|+||+|++ .+.|+.+|
T Consensus 5 ~~k-~vlItGa~g~iG~~la~~l~~~G~~~V 34 (260)
T PRK06198 5 DGK-VALVTGGTQGLGAAIARAFAERGAAGL 34 (260)
T ss_pred CCc-EEEEeCCCchHHHHHHHHHHHCCCCeE
Confidence 578 99999999999 15677733
No 316
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=29.78 E-value=52 Score=23.71 Aligned_cols=25 Identities=16% Similarity=0.369 Sum_probs=18.6
Q ss_pred CCCeEEEEecCC--cce-------e-ecCCceEeec
Q 039288 18 MGEEYVFISAAF--SSV-------Y-RSGFDDAFNY 43 (138)
Q Consensus 18 ~g~~~VLI~gaa--ggv-------~-~lGad~vi~~ 43 (138)
+|. ++||+||+ +|+ + +.|++-++.+
T Consensus 5 ~~k-~~lItGas~~~GIG~aia~~la~~G~~v~~~~ 39 (258)
T PRK07370 5 TGK-KALVTGIANNRSIAWGIAQQLHAAGAELGITY 39 (258)
T ss_pred CCc-EEEEeCCCCCCchHHHHHHHHHHCCCEEEEEe
Confidence 578 99999986 678 1 6688766654
No 317
>PRK06179 short chain dehydrogenase; Provisional
Probab=29.61 E-value=34 Score=24.60 Aligned_cols=14 Identities=14% Similarity=0.259 Sum_probs=12.3
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
.+. +++|+||+|++
T Consensus 3 ~~~-~vlVtGasg~i 16 (270)
T PRK06179 3 NSK-VALVTGASSGI 16 (270)
T ss_pred CCC-EEEEecCCCHH
Confidence 357 89999999999
No 318
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=29.34 E-value=34 Score=23.92 Aligned_cols=14 Identities=36% Similarity=0.470 Sum_probs=12.6
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
+|. ++||+||+|++
T Consensus 4 ~~k-~~lVtGas~~i 17 (235)
T PRK06550 4 MTK-TVLITGAASGI 17 (235)
T ss_pred CCC-EEEEcCCCchH
Confidence 578 99999999999
No 319
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=29.20 E-value=36 Score=24.11 Aligned_cols=26 Identities=19% Similarity=0.312 Sum_probs=18.7
Q ss_pred CCCeEEEEecCCcce-------e-ecCCceEeecC
Q 039288 18 MGEEYVFISAAFSSV-------Y-RSGFDDAFNYK 44 (138)
Q Consensus 18 ~g~~~VLI~gaaggv-------~-~lGad~vi~~~ 44 (138)
.+. ++||+||++|+ + +.|+..++..+
T Consensus 4 ~~~-~ilITGas~GiG~aia~~l~~~G~~v~~~~~ 37 (251)
T COG1028 4 SGK-VALVTGASSGIGRAIARALAREGARVVVAAR 37 (251)
T ss_pred CCC-EEEEeCCCCHHHHHHHHHHHHCCCeEEEEcC
Confidence 567 99999999999 1 45666454443
No 320
>PRK06482 short chain dehydrogenase; Provisional
Probab=28.92 E-value=68 Score=23.13 Aligned_cols=12 Identities=33% Similarity=0.335 Sum_probs=10.9
Q ss_pred CeEEEEecCCcce
Q 039288 20 EEYVFISAAFSSV 32 (138)
Q Consensus 20 ~~~VLI~gaaggv 32 (138)
. ++||+||+|++
T Consensus 3 k-~vlVtGasg~I 14 (276)
T PRK06482 3 K-TWFITGASSGF 14 (276)
T ss_pred C-EEEEecCCCHH
Confidence 5 79999999999
No 321
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=28.68 E-value=38 Score=23.93 Aligned_cols=14 Identities=21% Similarity=0.487 Sum_probs=12.6
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
++. ++||+||+|++
T Consensus 7 ~~k-~vlItGas~~i 20 (252)
T PRK08220 7 SGK-TVWVTGAAQGI 20 (252)
T ss_pred CCC-EEEEeCCCchH
Confidence 578 99999999998
No 322
>PRK06181 short chain dehydrogenase; Provisional
Probab=28.67 E-value=34 Score=24.48 Aligned_cols=13 Identities=31% Similarity=0.524 Sum_probs=11.4
Q ss_pred CCeEEEEecCCcce
Q 039288 19 GEEYVFISAAFSSV 32 (138)
Q Consensus 19 g~~~VLI~gaaggv 32 (138)
+. ++||+||+|++
T Consensus 1 ~~-~vlVtGasg~i 13 (263)
T PRK06181 1 GK-VVIITGASEGI 13 (263)
T ss_pred CC-EEEEecCCcHH
Confidence 35 89999999999
No 323
>PRK05650 short chain dehydrogenase; Provisional
Probab=28.54 E-value=72 Score=22.96 Aligned_cols=23 Identities=30% Similarity=0.319 Sum_probs=15.9
Q ss_pred EEEEecCCcce--------eecCCceEeecC
Q 039288 22 YVFISAAFSSV--------YRSGFDDAFNYK 44 (138)
Q Consensus 22 ~VLI~gaaggv--------~~lGad~vi~~~ 44 (138)
++||+||+|++ .+.|++.++-.+
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r 32 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGWRLALADV 32 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 79999999999 144665554433
No 324
>COG0298 HypC Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones]
Probab=27.99 E-value=46 Score=20.17 Aligned_cols=13 Identities=31% Similarity=0.749 Sum_probs=10.7
Q ss_pred CCCCCCeEEEEecC
Q 039288 15 SPKMGEEYVFISAA 28 (138)
Q Consensus 15 ~~~~g~~~VLI~ga 28 (138)
.++-|+ +||||-+
T Consensus 38 ~v~~Gd-yVLVHvG 50 (82)
T COG0298 38 EVKVGD-YVLVHVG 50 (82)
T ss_pred ccccCC-EEEEEee
Confidence 567799 9999975
No 325
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=27.71 E-value=57 Score=19.05 Aligned_cols=25 Identities=12% Similarity=0.177 Sum_probs=14.6
Q ss_pred HHHHHHhhcCCCCCCeEEEEecCC-cce
Q 039288 6 AYANLFENFSPKMGEEYVFISAAF-SSV 32 (138)
Q Consensus 6 A~~~L~~~~~~~~g~~~VLI~gaa-ggv 32 (138)
-|.+|.....-. ++ .+||||++ -|.
T Consensus 20 i~~~Ld~~~~~~-~~-~~lvhGga~~Ga 45 (71)
T PF10686_consen 20 IWAALDKVHARH-PD-MVLVHGGAPKGA 45 (71)
T ss_pred HHHHHHHHHHhC-CC-EEEEECCCCCCH
Confidence 345554333333 56 78999987 544
No 326
>PF09103 BRCA-2_OB1: BRCA2, oligonucleotide/oligosaccharide-binding, domain 1; InterPro: IPR015187 This domain assumes an OB fold, which consists of a highly curved five-stranded beta-sheet that closes on itself to form a beta-barrel. OB1 has a shallow groove formed by one face of the curved sheet and is demarcated by two loops, one between beta 1 and beta 2 and another between beta 4 and beta 5, which allows for weak single strand DNA binding. The domain also binds the 70-amino acid DSS1 (deleted in split-hand/split foot syndrome) protein, which was originally identified as one of three genes that map to a 1.5-Mb locus deleted in an inherited developmental malformation syndrome []. ; GO: 0000724 double-strand break repair via homologous recombination; PDB: 1IYJ_D 1MIU_A.
Probab=27.09 E-value=70 Score=20.73 Aligned_cols=21 Identities=14% Similarity=0.188 Sum_probs=13.9
Q ss_pred HHHHhhcCCCCCCeEEEEecCC
Q 039288 8 ANLFENFSPKMGEEYVFISAAF 29 (138)
Q Consensus 8 ~~L~~~~~~~~g~~~VLI~gaa 29 (138)
..+.+.++++-|+ ++.|+||.
T Consensus 55 ~~~l~~gki~vG~-KL~v~GA~ 75 (118)
T PF09103_consen 55 TRLLRKGKIRVGQ-KLRVCGAE 75 (118)
T ss_dssp HHHHHTT-S-TT--EEEESSBE
T ss_pred HHHHHhCCccCCc-cEEEECce
Confidence 3445678899999 99999983
No 327
>PRK05855 short chain dehydrogenase; Validated
Probab=26.97 E-value=73 Score=25.57 Aligned_cols=27 Identities=22% Similarity=0.263 Sum_probs=18.8
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecCc
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYKE 45 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~~ 45 (138)
.+. ++||+||+|++ -+.|++-++..+.
T Consensus 314 ~~~-~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~ 348 (582)
T PRK05855 314 SGK-LVVVTGAGSGIGRETALAFAREGAEVVASDID 348 (582)
T ss_pred CCC-EEEEECCcCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 467 99999999999 1456665444443
No 328
>PRK07201 short chain dehydrogenase; Provisional
Probab=26.94 E-value=70 Score=26.47 Aligned_cols=27 Identities=22% Similarity=0.305 Sum_probs=19.0
Q ss_pred CCCeEEEEecCCcce--------eecCCceEeecCc
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFNYKE 45 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~~~~ 45 (138)
.|. ++||+||+|++ .+.|++-++-.+.
T Consensus 370 ~~k-~vlItGas~giG~~la~~l~~~G~~V~~~~r~ 404 (657)
T PRK07201 370 VGK-VVLITGASSGIGRATAIKVAEAGATVFLVARN 404 (657)
T ss_pred CCC-EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 478 99999999999 1457655544443
No 329
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=26.90 E-value=37 Score=25.13 Aligned_cols=14 Identities=21% Similarity=0.325 Sum_probs=12.3
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
.|. +|||+||+|.+
T Consensus 3 ~~~-~ilVtGatGfI 16 (322)
T PLN02662 3 EGK-VVCVTGASGYI 16 (322)
T ss_pred CCC-EEEEECChHHH
Confidence 467 99999999988
No 330
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=26.83 E-value=88 Score=21.90 Aligned_cols=24 Identities=17% Similarity=0.282 Sum_probs=17.2
Q ss_pred CCCeEEEEecCCcce--------eecCCceEee
Q 039288 18 MGEEYVFISAAFSSV--------YRSGFDDAFN 42 (138)
Q Consensus 18 ~g~~~VLI~gaaggv--------~~lGad~vi~ 42 (138)
.+. ++||.||+|++ .+.|++-++-
T Consensus 6 ~~~-~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~ 37 (239)
T PRK07666 6 QGK-NALITGAGRGIGRAVAIALAKEGVNVGLL 37 (239)
T ss_pred CCC-EEEEEcCCchHHHHHHHHHHHCCCEEEEE
Confidence 367 89999999998 1557754443
No 331
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=26.79 E-value=55 Score=24.58 Aligned_cols=25 Identities=16% Similarity=0.134 Sum_probs=20.2
Q ss_pred CCCeEEEEecCC--cce--------eecCCceEeec
Q 039288 18 MGEEYVFISAAF--SSV--------YRSGFDDAFNY 43 (138)
Q Consensus 18 ~g~~~VLI~gaa--ggv--------~~lGad~vi~~ 43 (138)
.|+ ++||+||+ +|+ -+.|+.-++++
T Consensus 7 ~gk-~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~ 41 (299)
T PRK06300 7 TGK-IAFIAGIGDDQGYGWGIAKALAEAGATILVGT 41 (299)
T ss_pred CCC-EEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEe
Confidence 689 99999995 788 16799888864
No 332
>PRK07069 short chain dehydrogenase; Validated
Probab=26.68 E-value=68 Score=22.56 Aligned_cols=23 Identities=17% Similarity=0.141 Sum_probs=15.0
Q ss_pred EEEEecCCcce--------eecCCceEeecC
Q 039288 22 YVFISAAFSSV--------YRSGFDDAFNYK 44 (138)
Q Consensus 22 ~VLI~gaaggv--------~~lGad~vi~~~ 44 (138)
++||+||+|++ .+.|++.++-++
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r 31 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDI 31 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 37899998888 145665554443
No 333
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=26.20 E-value=77 Score=22.36 Aligned_cols=23 Identities=13% Similarity=0.244 Sum_probs=16.1
Q ss_pred EEEEecCCcce--------eecCCceEeecC
Q 039288 22 YVFISAAFSSV--------YRSGFDDAFNYK 44 (138)
Q Consensus 22 ~VLI~gaaggv--------~~lGad~vi~~~ 44 (138)
++||.||+|++ .+.|+..++-.+
T Consensus 2 ~~lItG~sg~iG~~la~~l~~~G~~v~~~~r 32 (254)
T TIGR02415 2 VALVTGGAQGIGKGIAERLAKDGFAVAVADL 32 (254)
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeC
Confidence 78999999999 155776554433
No 334
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=26.13 E-value=42 Score=24.04 Aligned_cols=14 Identities=21% Similarity=0.294 Sum_probs=12.3
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
.+. +|||.||+|.+
T Consensus 16 ~~~-~ilItGasG~i 29 (251)
T PLN00141 16 KTK-TVFVAGATGRT 29 (251)
T ss_pred cCC-eEEEECCCcHH
Confidence 467 99999999988
No 335
>PRK08177 short chain dehydrogenase; Provisional
Probab=26.10 E-value=79 Score=22.02 Aligned_cols=11 Identities=18% Similarity=0.138 Sum_probs=10.1
Q ss_pred EEEEecCCcce
Q 039288 22 YVFISAAFSSV 32 (138)
Q Consensus 22 ~VLI~gaaggv 32 (138)
+|+|+||+|++
T Consensus 3 ~vlItG~sg~i 13 (225)
T PRK08177 3 TALIIGASRGL 13 (225)
T ss_pred EEEEeCCCchH
Confidence 79999999988
No 336
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=25.79 E-value=40 Score=23.63 Aligned_cols=11 Identities=9% Similarity=0.268 Sum_probs=10.4
Q ss_pred EEEEecCCcce
Q 039288 22 YVFISAAFSSV 32 (138)
Q Consensus 22 ~VLI~gaaggv 32 (138)
+|||+||+|++
T Consensus 2 ~vlItGas~gI 12 (235)
T PRK09009 2 NILIVGGSGGI 12 (235)
T ss_pred EEEEECCCChH
Confidence 69999999999
No 337
>PLN02686 cinnamoyl-CoA reductase
Probab=25.71 E-value=42 Score=25.84 Aligned_cols=16 Identities=13% Similarity=0.154 Sum_probs=13.9
Q ss_pred CCCCCeEEEEecCCcce
Q 039288 16 PKMGEEYVFISAAFSSV 32 (138)
Q Consensus 16 ~~~g~~~VLI~gaaggv 32 (138)
...+. +|||+||+|.+
T Consensus 50 ~~~~k-~VLVTGatGfI 65 (367)
T PLN02686 50 DAEAR-LVCVTGGVSFL 65 (367)
T ss_pred CCCCC-EEEEECCchHH
Confidence 45688 99999999988
No 338
>PRK06123 short chain dehydrogenase; Provisional
Probab=25.62 E-value=46 Score=23.44 Aligned_cols=24 Identities=21% Similarity=0.434 Sum_probs=17.4
Q ss_pred CCeEEEEecCCcce--------eecCCceEeec
Q 039288 19 GEEYVFISAAFSSV--------YRSGFDDAFNY 43 (138)
Q Consensus 19 g~~~VLI~gaaggv--------~~lGad~vi~~ 43 (138)
+. ++||+||+|++ .+.|+..++.+
T Consensus 2 ~~-~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~ 33 (248)
T PRK06123 2 RK-VMIITGASRGIGAATALLAAERGYAVCLNY 33 (248)
T ss_pred CC-EEEEECCCchHHHHHHHHHHHCCCeEEEec
Confidence 45 89999999999 15577655543
No 339
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=25.43 E-value=75 Score=22.89 Aligned_cols=21 Identities=19% Similarity=0.116 Sum_probs=17.5
Q ss_pred HhhcCCCCCCeEEEEecCCcce
Q 039288 11 FENFSPKMGEEYVFISAAFSSV 32 (138)
Q Consensus 11 ~~~~~~~~g~~~VLI~gaaggv 32 (138)
.+...+++|+ +||-.|+.+|-
T Consensus 65 ~~~L~~~~g~-~VLEIGtGsGY 85 (209)
T COG2518 65 LQLLELKPGD-RVLEIGTGSGY 85 (209)
T ss_pred HHHhCCCCCC-eEEEECCCchH
Confidence 4567899999 99999987665
No 340
>PLN02240 UDP-glucose 4-epimerase
Probab=25.38 E-value=47 Score=24.96 Aligned_cols=14 Identities=14% Similarity=0.463 Sum_probs=12.4
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
++. +|||.||+|.+
T Consensus 4 ~~~-~vlItGatG~i 17 (352)
T PLN02240 4 MGR-TILVTGGAGYI 17 (352)
T ss_pred CCC-EEEEECCCChH
Confidence 467 99999999988
No 341
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=25.27 E-value=1e+02 Score=22.26 Aligned_cols=25 Identities=32% Similarity=0.565 Sum_probs=17.9
Q ss_pred CCCeEEEEecC--Ccce-------e-ecCCceEeec
Q 039288 18 MGEEYVFISAA--FSSV-------Y-RSGFDDAFNY 43 (138)
Q Consensus 18 ~g~~~VLI~ga--aggv-------~-~lGad~vi~~ 43 (138)
+|. ++||+|| ++|+ + +.|+.-++.+
T Consensus 5 ~~k-~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~ 39 (260)
T PRK06997 5 AGK-RILITGLLSNRSIAYGIAKACKREGAELAFTY 39 (260)
T ss_pred CCc-EEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEc
Confidence 578 9999997 4577 2 5687766654
No 342
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=25.22 E-value=1.2e+02 Score=24.40 Aligned_cols=34 Identities=15% Similarity=0.139 Sum_probs=24.0
Q ss_pred hHhHHHHHHhhcCCC-CCCeEEEEecCCcce--------eecCCc
Q 039288 3 GLTAYANLFENFSPK-MGEEYVFISAAFSSV--------YRSGFD 38 (138)
Q Consensus 3 ~~TA~~~L~~~~~~~-~g~~~VLI~gaaggv--------~~lGad 38 (138)
+..+|.++.+...+. +|+ +|+|.|. |.+ ..+|+.
T Consensus 195 ~~s~~~ai~rat~~~l~Gk-~VlViG~-G~IG~~vA~~lr~~Ga~ 237 (425)
T PRK05476 195 GESLLDGIKRATNVLIAGK-VVVVAGY-GDVGKGCAQRLRGLGAR 237 (425)
T ss_pred HhhhHHHHHHhccCCCCCC-EEEEECC-CHHHHHHHHHHHhCCCE
Confidence 345677776554554 899 9999997 677 366874
No 343
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=25.11 E-value=44 Score=23.35 Aligned_cols=23 Identities=13% Similarity=0.353 Sum_probs=17.0
Q ss_pred EEEEecCCcce--------eecCCceEeecC
Q 039288 22 YVFISAAFSSV--------YRSGFDDAFNYK 44 (138)
Q Consensus 22 ~VLI~gaaggv--------~~lGad~vi~~~ 44 (138)
++||+||+|++ .+.|+..++..+
T Consensus 2 ~~lItG~sg~iG~~la~~l~~~G~~v~~~~r 32 (242)
T TIGR01829 2 IALVTGGMGGIGTAICQRLAKDGYRVAANCG 32 (242)
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 79999999999 156776655444
No 344
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=24.48 E-value=82 Score=23.46 Aligned_cols=23 Identities=22% Similarity=0.037 Sum_probs=14.8
Q ss_pred HHHhhcCCCCCCeEEEEecCCcce
Q 039288 9 NLFENFSPKMGEEYVFISAAFSSV 32 (138)
Q Consensus 9 ~L~~~~~~~~g~~~VLI~gaaggv 32 (138)
.+.+.++++||+ +||-.|.+.|-
T Consensus 53 ~~~~~~~l~~G~-~vLDiGcGwG~ 75 (273)
T PF02353_consen 53 LLCEKLGLKPGD-RVLDIGCGWGG 75 (273)
T ss_dssp HHHTTTT--TT--EEEEES-TTSH
T ss_pred HHHHHhCCCCCC-EEEEeCCCccH
Confidence 456778999999 99999876555
No 345
>PRK05884 short chain dehydrogenase; Provisional
Probab=24.41 E-value=80 Score=22.17 Aligned_cols=23 Identities=9% Similarity=0.199 Sum_probs=15.7
Q ss_pred EEEEecCCcce-------e-ecCCceEeecC
Q 039288 22 YVFISAAFSSV-------Y-RSGFDDAFNYK 44 (138)
Q Consensus 22 ~VLI~gaaggv-------~-~lGad~vi~~~ 44 (138)
++||+||+|++ + +.|++-++-.+
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r 32 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGA 32 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeC
Confidence 68999999998 1 45665444433
No 346
>PLN02206 UDP-glucuronate decarboxylase
Probab=24.29 E-value=52 Score=26.22 Aligned_cols=14 Identities=21% Similarity=0.202 Sum_probs=12.6
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
++. +|||+||+|-+
T Consensus 118 ~~~-kILVTGatGfI 131 (442)
T PLN02206 118 KGL-RVVVTGGAGFV 131 (442)
T ss_pred CCC-EEEEECcccHH
Confidence 568 99999999988
No 347
>PRK07023 short chain dehydrogenase; Provisional
Probab=24.08 E-value=45 Score=23.53 Aligned_cols=11 Identities=0% Similarity=0.087 Sum_probs=10.4
Q ss_pred EEEEecCCcce
Q 039288 22 YVFISAAFSSV 32 (138)
Q Consensus 22 ~VLI~gaaggv 32 (138)
++||+||+|++
T Consensus 3 ~vlItGasggi 13 (243)
T PRK07023 3 RAIVTGHSRGL 13 (243)
T ss_pred eEEEecCCcch
Confidence 79999999999
No 348
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=24.05 E-value=47 Score=25.02 Aligned_cols=11 Identities=9% Similarity=0.066 Sum_probs=10.3
Q ss_pred EEEEecCCcce
Q 039288 22 YVFISAAFSSV 32 (138)
Q Consensus 22 ~VLI~gaaggv 32 (138)
+|||+||+|.+
T Consensus 2 ~vlVTGatGfI 12 (343)
T TIGR01472 2 IALITGITGQD 12 (343)
T ss_pred eEEEEcCCCcH
Confidence 79999999988
No 349
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=24.00 E-value=1.7e+02 Score=23.41 Aligned_cols=37 Identities=8% Similarity=0.009 Sum_probs=25.0
Q ss_pred hHhHHHHHHhhcCC-CCCCeEEEEecCCcce--------eecCCceEe
Q 039288 3 GLTAYANLFENFSP-KMGEEYVFISAAFSSV--------YRSGFDDAF 41 (138)
Q Consensus 3 ~~TA~~~L~~~~~~-~~g~~~VLI~gaaggv--------~~lGad~vi 41 (138)
+.++|.++.+.-++ -+|+ +|+|.|+ |.+ ..+|+..++
T Consensus 185 g~s~~~~i~r~t~~~l~Gk-tVvViG~-G~IG~~va~~ak~~Ga~ViV 230 (413)
T cd00401 185 RESLIDGIKRATDVMIAGK-VAVVAGY-GDVGKGCAQSLRGQGARVIV 230 (413)
T ss_pred chhhHHHHHHhcCCCCCCC-EEEEECC-CHHHHHHHHHHHHCCCEEEE
Confidence 34556666555444 6899 9999997 677 367885443
No 350
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=23.90 E-value=49 Score=25.05 Aligned_cols=16 Identities=6% Similarity=0.005 Sum_probs=13.4
Q ss_pred CCCCCeEEEEecCCcce
Q 039288 16 PKMGEEYVFISAAFSSV 32 (138)
Q Consensus 16 ~~~g~~~VLI~gaaggv 32 (138)
-..+. +|||+||+|.+
T Consensus 7 ~~~~~-~vLVtG~~GfI 22 (353)
T PLN02896 7 ESATG-TYCVTGATGYI 22 (353)
T ss_pred ccCCC-EEEEECCCcHH
Confidence 34578 99999999988
No 351
>PRK07775 short chain dehydrogenase; Provisional
Probab=23.63 E-value=51 Score=23.90 Aligned_cols=14 Identities=14% Similarity=0.131 Sum_probs=12.3
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
++. ++||+||+|++
T Consensus 9 ~~~-~vlVtGa~g~i 22 (274)
T PRK07775 9 DRR-PALVAGASSGI 22 (274)
T ss_pred CCC-EEEEECCCchH
Confidence 457 89999999999
No 352
>PLN00198 anthocyanidin reductase; Provisional
Probab=23.12 E-value=52 Score=24.68 Aligned_cols=14 Identities=0% Similarity=-0.152 Sum_probs=12.5
Q ss_pred CCCeEEEEecCCcce
Q 039288 18 MGEEYVFISAAFSSV 32 (138)
Q Consensus 18 ~g~~~VLI~gaaggv 32 (138)
.+. +|||+||+|.+
T Consensus 8 ~~~-~vlItG~~GfI 21 (338)
T PLN00198 8 GKK-TACVIGGTGFL 21 (338)
T ss_pred CCC-eEEEECCchHH
Confidence 478 99999999988
No 353
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=23.01 E-value=98 Score=22.96 Aligned_cols=37 Identities=22% Similarity=0.348 Sum_probs=30.4
Q ss_pred CCCCeEEEEecCCcce----------eecCCceEeecCccccHHHHHhh
Q 039288 17 KMGEEYVFISAAFSSV----------YRSGFDDAFNYKEELDLNATLKR 55 (138)
Q Consensus 17 ~~g~~~VLI~gaaggv----------~~lGad~vi~~~~~~~~~~~v~~ 55 (138)
-.|. +.||.|-+.-- .+.||..+|.|..+ .+.+++++
T Consensus 4 L~GK-~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~ 50 (259)
T COG0623 4 LEGK-RILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEE 50 (259)
T ss_pred cCCc-eEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHH
Confidence 4688 99999865433 27899999999998 79999998
No 354
>PLN02214 cinnamoyl-CoA reductase
Probab=22.63 E-value=58 Score=24.70 Aligned_cols=15 Identities=20% Similarity=0.248 Sum_probs=13.1
Q ss_pred CCCCeEEEEecCCcce
Q 039288 17 KMGEEYVFISAAFSSV 32 (138)
Q Consensus 17 ~~g~~~VLI~gaaggv 32 (138)
.++. +|||+||+|.+
T Consensus 8 ~~~~-~vlVTGatGfI 22 (342)
T PLN02214 8 PAGK-TVCVTGAGGYI 22 (342)
T ss_pred CCCC-EEEEECCCcHH
Confidence 4678 99999999988
No 355
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=22.52 E-value=1.1e+02 Score=23.43 Aligned_cols=26 Identities=19% Similarity=0.232 Sum_probs=21.6
Q ss_pred chHhHHHHHHhhcCCCCCCeEEEEecC
Q 039288 2 PGLTAYANLFENFSPKMGEEYVFISAA 28 (138)
Q Consensus 2 ~~~TA~~~L~~~~~~~~g~~~VLI~ga 28 (138)
+|.+|.++.....++++|+ .|++.+-
T Consensus 48 sgt~Al~~al~~l~~~~gd-eVi~p~~ 73 (363)
T PF01041_consen 48 SGTSALHLALRALGLGPGD-EVIVPAY 73 (363)
T ss_dssp SHHHHHHHHHHHTTGGTTS-EEEEESS
T ss_pred ChhHHHHHHHHhcCCCcCc-eEecCCC
Confidence 4677888777788999999 9999974
No 356
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=22.27 E-value=54 Score=23.11 Aligned_cols=21 Identities=24% Similarity=0.371 Sum_probs=16.2
Q ss_pred EEEEecCCcce-------e-ecCCceEee
Q 039288 22 YVFISAAFSSV-------Y-RSGFDDAFN 42 (138)
Q Consensus 22 ~VLI~gaaggv-------~-~lGad~vi~ 42 (138)
++||+||+|++ + +.|+..++.
T Consensus 4 ~ilItGas~giG~~la~~l~~~g~~v~~~ 32 (248)
T PRK06947 4 VVLITGASRGIGRATAVLAAARGWSVGIN 32 (248)
T ss_pred EEEEeCCCCcHHHHHHHHHHHCCCEEEEE
Confidence 89999999999 1 557766554
No 357
>COG4778 PhnL ABC-type phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=22.25 E-value=63 Score=23.04 Aligned_cols=17 Identities=29% Similarity=0.268 Sum_probs=13.7
Q ss_pred CCCCCCeEEEEecCCcce
Q 039288 15 SPKMGEEYVFISAAFSSV 32 (138)
Q Consensus 15 ~~~~g~~~VLI~gaaggv 32 (138)
.++.|| +|..||.+|.-
T Consensus 33 sV~aGE-CvvL~G~SG~G 49 (235)
T COG4778 33 SVNAGE-CVVLHGPSGSG 49 (235)
T ss_pred EecCcc-EEEeeCCCCCc
Confidence 457899 99999987655
No 358
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=22.22 E-value=52 Score=23.72 Aligned_cols=21 Identities=10% Similarity=0.279 Sum_probs=16.0
Q ss_pred EEEEecCCcce--------eecCCceEee
Q 039288 22 YVFISAAFSSV--------YRSGFDDAFN 42 (138)
Q Consensus 22 ~VLI~gaaggv--------~~lGad~vi~ 42 (138)
++||+||+|++ .+.|++.++-
T Consensus 3 ~~lITGas~gIG~~~a~~l~~~G~~V~~~ 31 (267)
T TIGR02685 3 AAVVTGAAKRIGSSIAVALHQEGYRVVLH 31 (267)
T ss_pred EEEEeCCCCcHHHHHHHHHHhCCCeEEEE
Confidence 79999999999 1567765553
No 359
>TIGR02703 carboxysome_A carboxysome peptide A. This model distinguishes one of two closely related paralogs encoded by nearby genes in the carboxysome operons of a number of cyanobacteria and chemoautotrophic bacteria. More distantly related proteins, also belonging to Pfam family pfam03319, participate in other types of shell such as the ethanolamine degradation organelle.
Probab=22.11 E-value=57 Score=19.78 Aligned_cols=15 Identities=20% Similarity=0.328 Sum_probs=11.1
Q ss_pred CCCCCCeEEEEecCCc
Q 039288 15 SPKMGEEYVFISAAFS 30 (138)
Q Consensus 15 ~~~~g~~~VLI~gaag 30 (138)
+-.+|| +||+..+++
T Consensus 43 GAG~Ge-~Vlv~~Gs~ 57 (81)
T TIGR02703 43 GCKPGD-WVLCVGSSA 57 (81)
T ss_pred CCCCCC-EEEEeCCHH
Confidence 446899 999986654
No 360
>COG1889 NOP1 Fibrillarin-like rRNA methylase [Translation, ribosomal structure and biogenesis]
Probab=21.83 E-value=77 Score=23.03 Aligned_cols=32 Identities=28% Similarity=0.244 Sum_probs=23.0
Q ss_pred hcCCCCCCeEEEEecCCcce--------eecCCceEeecCc
Q 039288 13 NFSPKMGEEYVFISAAFSSV--------YRSGFDDAFNYKE 45 (138)
Q Consensus 13 ~~~~~~g~~~VLI~gaaggv--------~~lGad~vi~~~~ 45 (138)
..++++|+ +||=.|||+|. -.-|.-..+.+..
T Consensus 71 ~~pi~~g~-~VLYLGAasGTTvSHVSDIv~~G~iYaVEfs~ 110 (231)
T COG1889 71 NFPIKEGS-KVLYLGAASGTTVSHVSDIVGEGRIYAVEFSP 110 (231)
T ss_pred cCCcCCCC-EEEEeeccCCCcHhHHHhccCCCcEEEEEecc
Confidence 35789999 99999999988 1345555555544
No 361
>PLN02854 3-ketoacyl-CoA synthase
Probab=21.64 E-value=99 Score=25.52 Aligned_cols=28 Identities=18% Similarity=0.019 Sum_probs=20.3
Q ss_pred HhHHHHHHh---hcCCCCCCeEEEEecCCcce
Q 039288 4 LTAYANLFE---NFSPKMGEEYVFISAAFSSV 32 (138)
Q Consensus 4 ~TA~~~L~~---~~~~~~g~~~VLI~gaaggv 32 (138)
.+-|+.|.+ .+++++|| +|+..|-++|.
T Consensus 454 ASI~~~L~~~~~kGrik~GD-~Vl~iaFGsGf 484 (521)
T PLN02854 454 SSLWYELAYTEAKGRVSAGD-RVWQIAFGSGF 484 (521)
T ss_pred hHHHHHHHHHHHcCCCCCCC-EEEEEEEchhh
Confidence 455666544 36789999 99999876666
No 362
>PLN02192 3-ketoacyl-CoA synthase
Probab=21.21 E-value=1.1e+02 Score=25.27 Aligned_cols=28 Identities=18% Similarity=-0.002 Sum_probs=20.2
Q ss_pred HhHHHHHHh---hcCCCCCCeEEEEecCCcce
Q 039288 4 LTAYANLFE---NFSPKMGEEYVFISAAFSSV 32 (138)
Q Consensus 4 ~TA~~~L~~---~~~~~~g~~~VLI~gaaggv 32 (138)
.+-|++|.+ .+++++|| +|+..|-++|.
T Consensus 442 aSI~~aL~~~eakgrik~GD-rVl~iaFGsGf 472 (511)
T PLN02192 442 SSLWYELAYSEAKGRIKKGD-RTWQIAFGSGF 472 (511)
T ss_pred hHHHHHHHHHHHcCCCCCCC-EEEEEEEcchH
Confidence 455665543 46799999 99999876666
No 363
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=21.19 E-value=60 Score=27.24 Aligned_cols=15 Identities=20% Similarity=0.093 Sum_probs=13.0
Q ss_pred CCCCeEEEEecCCcce
Q 039288 17 KMGEEYVFISAAFSSV 32 (138)
Q Consensus 17 ~~g~~~VLI~gaaggv 32 (138)
+++. +|||+||+|-+
T Consensus 313 ~~~~-~VLVTGatGFI 327 (660)
T PRK08125 313 KRRT-RVLILGVNGFI 327 (660)
T ss_pred hcCC-EEEEECCCchH
Confidence 4677 99999999987
No 364
>KOG0820 consensus Ribosomal RNA adenine dimethylase [RNA processing and modification]
Probab=20.73 E-value=2.1e+02 Score=21.88 Aligned_cols=46 Identities=13% Similarity=0.059 Sum_probs=33.3
Q ss_pred HHHHhhcCCCCCCeEEEEecCCcce-----eecCCceEeecCccccHHHHHhh
Q 039288 8 ANLFENFSPKMGEEYVFISAAFSSV-----YRSGFDDAFNYKEELDLNATLKR 55 (138)
Q Consensus 8 ~~L~~~~~~~~g~~~VLI~gaaggv-----~~lGad~vi~~~~~~~~~~~v~~ 55 (138)
..+.+.+.+++++ .||-.|.+.|. .+.|+.-|--..++ -+++.+.+
T Consensus 48 ~~I~~ka~~k~tD-~VLEvGPGTGnLT~~lLe~~kkVvA~E~Dp-rmvael~k 98 (315)
T KOG0820|consen 48 DQIVEKADLKPTD-VVLEVGPGTGNLTVKLLEAGKKVVAVEIDP-RMVAELEK 98 (315)
T ss_pred HHHHhccCCCCCC-EEEEeCCCCCHHHHHHHHhcCeEEEEecCc-HHHHHHHH
Confidence 3466789999999 99999876555 37777655444455 67777776
No 365
>COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=20.59 E-value=70 Score=22.76 Aligned_cols=17 Identities=24% Similarity=0.378 Sum_probs=14.3
Q ss_pred CCCCCCeEEEEecCCcce
Q 039288 15 SPKMGEEYVFISAAFSSV 32 (138)
Q Consensus 15 ~~~~g~~~VLI~gaaggv 32 (138)
.+++|| .++|+|-+|.-
T Consensus 25 ~v~~Ge-~iaitGPSG~G 41 (223)
T COG4619 25 SVRAGE-FIAITGPSGCG 41 (223)
T ss_pred eecCCc-eEEEeCCCCcc
Confidence 467999 99999987765
No 366
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=20.11 E-value=59 Score=22.78 Aligned_cols=20 Identities=10% Similarity=0.306 Sum_probs=15.6
Q ss_pred EEEEecCCcce--------eecCCceEe
Q 039288 22 YVFISAAFSSV--------YRSGFDDAF 41 (138)
Q Consensus 22 ~VLI~gaaggv--------~~lGad~vi 41 (138)
++||+||+|++ .+.|++.++
T Consensus 3 ~~lItGa~g~iG~~l~~~l~~~g~~v~~ 30 (247)
T PRK09730 3 IALVTGGSRGIGRATALLLAQEGYTVAV 30 (247)
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEE
Confidence 79999999999 156777654
No 367
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=20.02 E-value=1.7e+02 Score=24.03 Aligned_cols=15 Identities=13% Similarity=0.018 Sum_probs=12.2
Q ss_pred CCCCCeEEEEecCCcce
Q 039288 16 PKMGEEYVFISAAFSSV 32 (138)
Q Consensus 16 ~~~g~~~VLI~gaaggv 32 (138)
..+|+ +|+|.|+ |.+
T Consensus 162 ~~pg~-kVlViGa-G~i 176 (509)
T PRK09424 162 KVPPA-KVLVIGA-GVA 176 (509)
T ss_pred CcCCC-EEEEECC-cHH
Confidence 45899 9999997 666
No 368
>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]
Probab=20.01 E-value=1.3e+02 Score=23.23 Aligned_cols=21 Identities=24% Similarity=0.110 Sum_probs=15.2
Q ss_pred hhcCCCCCCeEEEEecCCcce
Q 039288 12 ENFSPKMGEEYVFISAAFSSV 32 (138)
Q Consensus 12 ~~~~~~~g~~~VLI~gaaggv 32 (138)
..+.++.|.-+|||.||++|-
T Consensus 33 ~~gp~~ngPKkVLviGaSsGy 53 (398)
T COG3007 33 AAGPIKNGPKKVLVIGASSGY 53 (398)
T ss_pred hcCCccCCCceEEEEecCCcc
Confidence 345566553389999999988
Done!