Query 039290
Match_columns 1049
No_of_seqs 976 out of 6637
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 13:50:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039290.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039290hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 3.4E-90 1.2E-94 864.7 41.3 649 23-689 5-752 (768)
2 3rgz_A Protein brassinosteroid 100.0 4.3E-72 1.5E-76 701.0 30.9 563 75-655 102-744 (768)
3 1ziw_A TOLL-like receptor 3; i 100.0 5.1E-64 1.7E-68 622.7 40.9 572 73-656 25-627 (680)
4 1ziw_A TOLL-like receptor 3; i 100.0 2.8E-63 9.7E-68 616.0 40.0 591 78-679 9-627 (680)
5 3t6q_A CD180 antigen; protein- 100.0 1.5E-59 5.2E-64 574.7 36.2 534 78-656 17-565 (606)
6 3j0a_A TOLL-like receptor 5; m 100.0 3.9E-58 1.3E-62 580.7 42.1 537 77-657 8-566 (844)
7 4eco_A Uncharacterized protein 100.0 2E-60 7E-65 581.6 20.3 482 29-555 29-600 (636)
8 3vq2_A TLR4, TOLL-like recepto 100.0 2.9E-58 9.9E-63 563.3 35.3 537 77-656 15-563 (606)
9 4ecn_A Leucine-rich repeat pro 100.0 5.2E-58 1.8E-62 567.6 28.2 478 27-554 266-863 (876)
10 3t6q_A CD180 antigen; protein- 100.0 3.4E-56 1.1E-60 545.0 35.2 528 63-631 14-564 (606)
11 3j0a_A TOLL-like receptor 5; m 100.0 1.1E-55 3.7E-60 558.5 36.6 527 61-631 14-564 (844)
12 3vq2_A TLR4, TOLL-like recepto 100.0 2.9E-55 9.8E-60 536.8 31.4 529 100-679 14-563 (606)
13 2z63_A TOLL-like receptor 4, v 100.0 2.2E-52 7.4E-57 507.7 29.7 534 78-678 12-560 (570)
14 2z81_A CD282 antigen, TOLL-lik 100.0 1.8E-52 6.1E-57 505.8 24.1 499 60-656 3-515 (549)
15 2z63_A TOLL-like receptor 4, v 100.0 4.1E-51 1.4E-55 496.4 28.9 496 73-632 28-536 (570)
16 4asz_A BDNF/NT-3 growth factor 100.0 2.3E-52 7.9E-57 456.0 14.8 265 761-1049 13-297 (299)
17 4eco_A Uncharacterized protein 100.0 1.5E-51 5.2E-56 503.2 20.2 507 28-627 25-600 (636)
18 4aoj_A High affinity nerve gro 100.0 1.8E-51 6E-56 455.5 17.6 264 762-1049 42-327 (329)
19 3omv_A RAF proto-oncogene seri 100.0 2.1E-50 7E-55 440.2 19.0 262 760-1043 35-302 (307)
20 4ecn_A Leucine-rich repeat pro 100.0 8.9E-50 3E-54 494.1 27.1 383 233-651 435-864 (876)
21 4g8a_A TOLL-like receptor 4; l 100.0 6.5E-49 2.2E-53 483.8 33.4 535 79-656 37-585 (635)
22 4fih_A Serine/threonine-protei 100.0 3.6E-50 1.2E-54 443.3 18.7 250 761-1035 74-324 (346)
23 4gt4_A Tyrosine-protein kinase 100.0 2.8E-50 9.5E-55 441.5 15.9 254 762-1039 27-304 (308)
24 2z7x_B TOLL-like receptor 1, v 100.0 1.5E-49 5.1E-54 476.6 22.2 457 101-656 4-486 (520)
25 4b9d_A Serine/threonine-protei 100.0 6.6E-50 2.3E-54 442.0 14.8 251 760-1035 23-277 (350)
26 4g3f_A NF-kappa-beta-inducing 100.0 2.7E-49 9.1E-54 435.3 19.6 257 760-1044 57-319 (336)
27 2z81_A CD282 antigen, TOLL-lik 100.0 1.7E-48 5.9E-53 470.9 25.5 465 201-678 28-514 (549)
28 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.7E-49 6E-54 431.2 13.7 249 761-1035 32-285 (311)
29 4fie_A Serine/threonine-protei 100.0 7E-49 2.4E-53 443.8 19.1 250 761-1035 151-401 (423)
30 2z7x_B TOLL-like receptor 1, v 100.0 1.8E-48 6E-53 467.3 20.9 452 77-581 4-483 (520)
31 3hyh_A Carbon catabolite-derep 100.0 1.6E-48 5.5E-53 418.2 17.8 248 760-1036 12-264 (275)
32 3hmm_A TGF-beta receptor type- 100.0 1.5E-48 5.2E-53 429.3 17.3 273 762-1042 4-298 (303)
33 4ase_A Vascular endothelial gr 100.0 8.7E-49 3E-53 437.2 14.6 267 754-1043 57-349 (353)
34 3fpq_A Serine/threonine-protei 100.0 3.2E-48 1.1E-52 419.9 18.1 245 764-1035 29-283 (290)
35 3ubd_A Ribosomal protein S6 ki 100.0 1.5E-48 5E-53 424.3 9.8 248 761-1035 24-282 (304)
36 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 4E-46 1.4E-50 450.6 24.8 469 100-656 34-515 (562)
37 4g8a_A TOLL-like receptor 4; l 100.0 2.4E-45 8.1E-50 452.0 31.6 514 73-629 52-582 (635)
38 4g31_A Eukaryotic translation 100.0 2.2E-46 7.6E-51 409.7 16.9 249 761-1035 5-280 (299)
39 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 6.8E-45 2.3E-49 439.8 23.5 453 76-583 34-514 (562)
40 1ogq_A PGIP-2, polygalacturona 100.0 5.9E-45 2E-49 405.1 16.7 277 26-312 2-285 (313)
41 4b99_A Mitogen-activated prote 100.0 1.3E-44 4.3E-49 411.0 14.9 270 761-1035 54-345 (398)
42 4f9c_A Cell division cycle 7-r 100.0 4.7E-44 1.6E-48 402.2 18.3 269 758-1035 18-353 (361)
43 1jl5_A Outer protein YOPM; leu 100.0 7.4E-43 2.5E-47 407.5 27.2 424 73-589 11-439 (454)
44 1jl5_A Outer protein YOPM; leu 100.0 2.9E-42 1E-46 402.5 29.0 400 74-564 35-438 (454)
45 3uto_A Twitchin; kinase, muscl 100.0 2.6E-43 8.7E-48 420.6 18.2 253 760-1035 156-411 (573)
46 3v5w_A G-protein coupled recep 100.0 3.1E-43 1E-47 414.5 18.0 249 760-1035 188-450 (689)
47 3v47_A TOLL-like receptor 5B a 100.0 7E-42 2.4E-46 402.8 27.8 389 58-511 5-412 (455)
48 3v47_A TOLL-like receptor 5B a 100.0 5.7E-42 1.9E-46 403.6 25.6 385 227-658 14-415 (455)
49 2qkw_B Protein kinase; three-h 100.0 3.2E-42 1.1E-46 385.6 21.5 288 750-1046 28-320 (321)
50 3uim_A Brassinosteroid insensi 100.0 5.6E-42 1.9E-46 384.7 21.2 283 747-1038 16-308 (326)
51 3s95_A LIMK-1, LIM domain kina 100.0 2.2E-41 7.4E-46 376.9 19.0 265 760-1046 9-287 (310)
52 3fxz_A Serine/threonine-protei 100.0 4.5E-41 1.6E-45 371.3 21.0 251 760-1035 19-270 (297)
53 3sxs_A Cytoplasmic tyrosine-pr 100.0 5.2E-41 1.8E-45 365.5 17.5 260 760-1044 7-267 (268)
54 4hcu_A Tyrosine-protein kinase 100.0 5.3E-41 1.8E-45 365.6 17.4 258 760-1042 9-267 (269)
55 3soc_A Activin receptor type-2 100.0 9E-41 3.1E-45 373.6 17.8 274 760-1043 23-320 (322)
56 3bz5_A Internalin-J, INLJ; leu 100.0 1.3E-39 4.4E-44 380.4 27.6 377 98-587 19-395 (457)
57 3zgw_A Maternal embryonic leuc 100.0 5.8E-41 2E-45 376.8 15.4 251 760-1036 9-262 (347)
58 2psq_A Fibroblast growth facto 100.0 2.3E-40 7.8E-45 377.1 20.2 261 760-1044 80-367 (370)
59 3p86_A Serine/threonine-protei 100.0 1.6E-40 5.5E-45 368.8 18.0 260 759-1043 35-300 (309)
60 2c30_A Serine/threonine-protei 100.0 6E-40 2.1E-44 366.5 22.0 262 749-1035 23-295 (321)
61 3gen_A Tyrosine-protein kinase 100.0 2.1E-40 7.2E-45 363.9 17.9 259 760-1043 23-282 (283)
62 2nru_A Interleukin-1 receptor- 100.0 2.2E-39 7.4E-44 360.3 26.3 282 747-1041 11-306 (307)
63 3kul_A Ephrin type-A receptor 100.0 1.8E-40 6E-45 371.5 17.6 261 760-1044 48-316 (325)
64 3fe3_A MAP/microtubule affinit 100.0 1.2E-40 4.1E-45 372.3 15.9 249 759-1035 13-265 (328)
65 3cbl_A C-FES, proto-oncogene t 100.0 7.5E-41 2.6E-45 382.6 13.6 260 760-1043 113-376 (377)
66 3ugc_A Tyrosine-protein kinase 100.0 1E-40 3.6E-45 368.6 14.1 276 760-1044 9-294 (295)
67 4eqm_A Protein kinase; transfe 100.0 2.3E-40 7.8E-45 365.3 16.4 265 760-1045 10-279 (294)
68 1tki_A Titin; serine kinase, m 100.0 4E-40 1.4E-44 367.6 18.2 253 760-1036 4-259 (321)
69 2yab_A Death-associated protei 100.0 1E-39 3.6E-44 369.0 20.6 252 760-1035 11-273 (361)
70 3niz_A Rhodanese family protei 100.0 1.3E-39 4.4E-44 362.2 20.5 271 760-1035 20-301 (311)
71 1o6l_A RAC-beta serine/threoni 100.0 1.1E-39 3.6E-44 365.6 19.1 249 760-1035 4-261 (337)
72 3t9t_A Tyrosine-protein kinase 100.0 8.5E-40 2.9E-44 355.7 16.8 258 760-1042 7-265 (267)
73 2qol_A Ephrin receptor; recept 100.0 6.8E-40 2.3E-44 373.4 16.4 260 760-1043 44-311 (373)
74 4euu_A Serine/threonine-protei 100.0 4.8E-39 1.6E-43 359.5 22.9 275 761-1040 9-308 (319)
75 3tki_A Serine/threonine-protei 100.0 1.4E-39 4.8E-44 363.7 18.4 253 760-1035 6-262 (323)
76 3v8s_A RHO-associated protein 100.0 3.8E-40 1.3E-44 377.9 13.4 259 754-1035 62-330 (410)
77 1mp8_A Focal adhesion kinase 1 100.0 9.3E-40 3.2E-44 358.2 15.9 260 760-1044 14-279 (281)
78 2y0a_A Death-associated protei 100.0 2.9E-39 1E-43 361.8 20.2 251 761-1035 11-272 (326)
79 3vhe_A Vascular endothelial gr 100.0 8.2E-40 2.8E-44 372.4 15.8 269 752-1043 13-357 (359)
80 3q4u_A Activin receptor type-1 100.0 4.9E-39 1.7E-43 356.4 21.6 264 760-1039 7-300 (301)
81 3lb7_A RAF proto-oncogene seri 100.0 2E-39 6.8E-44 359.8 18.2 263 760-1044 35-303 (307)
82 1csn_A Casein kinase-1; phosph 100.0 6.2E-39 2.1E-43 355.0 22.1 266 760-1046 9-288 (298)
83 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.2E-39 4.1E-44 364.6 16.4 248 760-1036 8-260 (336)
84 4e5w_A Tyrosine-protein kinase 100.0 1.5E-39 5.2E-44 360.7 16.9 272 761-1041 21-302 (302)
85 2izr_A Casein kinase I isoform 100.0 3.8E-39 1.3E-43 362.1 20.2 263 761-1045 9-285 (330)
86 3mdy_A Bone morphogenetic prot 100.0 8.1E-39 2.8E-43 360.8 22.8 267 759-1044 35-334 (337)
87 1ob3_A PFPK5, cell division co 100.0 1.7E-39 5.7E-44 357.5 16.6 270 761-1035 2-281 (288)
88 1kob_A Twitchin; kinase, intra 100.0 1.9E-39 6.7E-44 370.1 17.6 253 760-1035 50-305 (387)
89 4aw2_A Serine/threonine-protei 100.0 9.2E-40 3.2E-44 377.6 14.9 263 753-1035 66-339 (437)
90 3o0g_A Cell division protein k 100.0 4.6E-39 1.6E-43 354.8 19.7 270 761-1035 2-283 (292)
91 3c0i_A Peripheral plasma membr 100.0 1.7E-39 6E-44 367.4 16.1 252 761-1035 24-287 (351)
92 2id5_A Lingo-1, leucine rich r 100.0 1.4E-38 4.7E-43 376.9 24.1 347 298-678 14-360 (477)
93 3poz_A Epidermal growth factor 100.0 2.2E-39 7.6E-44 363.2 16.3 261 761-1046 15-283 (327)
94 4dc2_A Protein kinase C IOTA t 100.0 1.9E-39 6.5E-44 369.9 15.9 258 760-1035 51-319 (396)
95 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.1E-39 3.7E-44 368.0 13.7 249 760-1035 22-281 (353)
96 3soa_A Calcium/calmodulin-depe 100.0 2.8E-39 9.7E-44 375.0 17.6 253 760-1035 10-268 (444)
97 1luf_A Muscle-specific tyrosin 100.0 1.3E-39 4.4E-44 368.4 14.3 266 758-1047 44-341 (343)
98 3tt0_A Basic fibroblast growth 100.0 3.3E-39 1.1E-43 369.8 17.8 261 760-1044 68-355 (382)
99 4f0f_A Serine/threonine-protei 100.0 1.1E-38 3.8E-43 350.9 21.2 252 761-1039 19-287 (287)
100 1qcf_A Haematopoetic cell kina 100.0 1.7E-39 5.8E-44 380.6 15.4 257 760-1042 187-445 (454)
101 2vd5_A DMPK protein; serine/th 100.0 1.4E-39 4.9E-44 373.4 14.3 262 753-1035 53-328 (412)
102 1rjb_A FL cytokine receptor; k 100.0 1.9E-39 6.4E-44 367.1 15.1 262 759-1043 43-336 (344)
103 1fot_A TPK1 delta, CAMP-depend 100.0 6.2E-39 2.1E-43 356.7 19.0 246 760-1035 5-259 (318)
104 1k9a_A Carboxyl-terminal SRC k 100.0 6.7E-39 2.3E-43 374.9 20.0 252 760-1042 192-446 (450)
105 3lxl_A Tyrosine-protein kinase 100.0 1.7E-39 5.7E-44 364.5 14.3 275 761-1044 23-306 (327)
106 2x4f_A Myosin light chain kina 100.0 3.7E-39 1.3E-43 367.1 17.0 247 766-1035 94-343 (373)
107 1t46_A HOMO sapiens V-KIT hard 100.0 4.5E-39 1.5E-43 358.9 17.4 264 760-1046 22-312 (313)
108 2ivs_A Proto-oncogene tyrosine 100.0 4.3E-39 1.5E-43 359.2 17.3 259 760-1042 22-312 (314)
109 3bz5_A Internalin-J, INLJ; leu 100.0 4.2E-38 1.5E-42 367.6 26.3 352 199-657 42-393 (457)
110 4fr4_A YANK1, serine/threonine 100.0 6.4E-39 2.2E-43 364.4 18.7 249 761-1035 15-272 (384)
111 2bdw_A Hypothetical protein K1 100.0 3.5E-39 1.2E-43 365.9 16.3 252 760-1035 28-285 (362)
112 2pmi_A Negative RE, cyclin-dep 100.0 9.4E-39 3.2E-43 356.4 19.3 270 760-1035 4-294 (317)
113 3c1x_A Hepatocyte growth facto 100.0 1.2E-39 4.1E-44 370.8 12.1 259 762-1044 90-358 (373)
114 3lxp_A Non-receptor tyrosine-p 100.0 2.5E-39 8.5E-44 361.4 14.4 272 763-1045 33-314 (318)
115 3dtc_A Mitogen-activated prote 100.0 4.6E-39 1.6E-43 350.8 16.0 251 760-1039 6-271 (271)
116 3l9p_A Anaplastic lymphoma kin 100.0 1.7E-39 5.9E-44 369.6 13.1 259 761-1043 71-347 (367)
117 1opk_A P150, C-ABL, proto-onco 100.0 3.4E-39 1.2E-43 381.5 15.8 257 760-1041 219-478 (495)
118 2zv2_A Calcium/calmodulin-depe 100.0 8.2E-39 2.8E-43 353.9 17.7 250 760-1035 12-293 (298)
119 1qpc_A LCK kinase; alpha beta 100.0 1.1E-38 3.6E-43 349.5 18.4 258 760-1043 12-271 (279)
120 3qd2_B Eukaryotic translation 100.0 9.5E-39 3.3E-43 359.4 18.4 250 760-1035 5-326 (332)
121 3op5_A Serine/threonine-protei 100.0 8.9E-39 3.1E-43 364.0 18.4 271 760-1045 34-333 (364)
122 1xjd_A Protein kinase C, theta 100.0 2.8E-39 9.7E-44 363.0 14.0 251 758-1035 14-270 (345)
123 3kex_A Receptor tyrosine-prote 100.0 3.4E-39 1.2E-43 361.5 14.4 261 761-1046 13-281 (325)
124 3kfa_A Tyrosine-protein kinase 100.0 2.1E-39 7.3E-44 356.8 12.5 261 759-1044 11-274 (288)
125 1rdq_E PKA C-alpha, CAMP-depen 100.0 7.9E-39 2.7E-43 360.7 17.3 245 761-1035 41-294 (350)
126 3qup_A Tyrosine-protein kinase 100.0 6.9E-39 2.4E-43 359.0 16.3 261 759-1043 21-300 (323)
127 3g2f_A Bone morphogenetic prot 100.0 1.2E-38 4E-43 359.3 18.3 276 760-1044 12-321 (336)
128 3cc6_A Protein tyrosine kinase 100.0 7E-39 2.4E-43 351.3 16.0 259 760-1043 11-275 (281)
129 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 3.4E-39 1.2E-43 377.6 14.2 257 760-1042 183-441 (452)
130 3og7_A AKAP9-BRAF fusion prote 100.0 8.1E-39 2.8E-43 352.2 16.3 260 760-1041 23-288 (289)
131 3cok_A Serine/threonine-protei 100.0 1.3E-38 4.4E-43 348.6 17.8 250 760-1035 10-263 (278)
132 3kmu_A ILK, integrin-linked ki 100.0 5.8E-39 2E-43 349.9 15.0 252 760-1041 9-270 (271)
133 2i1m_A Macrophage colony-stimu 100.0 4.7E-39 1.6E-43 362.0 14.7 264 759-1045 44-330 (333)
134 3a8x_A Protein kinase C IOTA t 100.0 5.5E-39 1.9E-43 361.5 15.3 257 761-1035 9-276 (345)
135 1u59_A Tyrosine-protein kinase 100.0 1.3E-38 4.5E-43 350.2 17.9 259 761-1044 9-275 (287)
136 3p1a_A MYT1 kinase, membrane-a 100.0 4.8E-39 1.6E-43 357.8 14.2 245 761-1035 57-305 (311)
137 2eva_A TAK1 kinase - TAB1 chim 100.0 1.6E-38 5.5E-43 352.8 18.1 255 761-1043 8-265 (307)
138 3uc3_A Serine/threonine-protei 100.0 1.9E-38 6.7E-43 359.9 19.1 254 760-1036 19-276 (361)
139 3lzb_A Epidermal growth factor 100.0 1.2E-38 4.1E-43 357.0 17.0 263 760-1047 14-284 (327)
140 4fvq_A Tyrosine-protein kinase 100.0 1E-38 3.4E-43 351.7 16.0 251 761-1041 8-275 (289)
141 2w1i_A JAK2; chromosomal rearr 100.0 1.2E-38 4.1E-43 357.3 16.8 276 760-1044 40-325 (326)
142 3f3z_A Calcium/calmodulin-depe 100.0 2.3E-38 7.9E-43 346.4 18.7 251 760-1035 8-262 (277)
143 3gni_B Strad alpha; kinase fol 100.0 1.8E-38 6.1E-43 365.2 18.6 273 760-1035 24-334 (389)
144 2pvf_A Fibroblast growth facto 100.0 1.8E-38 6.2E-43 357.1 18.2 261 760-1044 34-321 (334)
145 2w4o_A Calcium/calmodulin-depe 100.0 1.4E-38 4.6E-43 359.6 17.2 251 760-1035 52-306 (349)
146 2i0e_A Protein kinase C-beta I 100.0 9.9E-39 3.4E-43 359.8 15.9 250 759-1035 18-277 (353)
147 3a62_A Ribosomal protein S6 ki 100.0 1.2E-38 4.1E-43 357.0 16.4 249 760-1035 16-277 (327)
148 2a2a_A Death-associated protei 100.0 3.5E-38 1.2E-42 352.7 19.8 252 760-1035 11-273 (321)
149 2y94_A 5'-AMP-activated protei 100.0 2.4E-38 8.2E-43 369.5 19.2 248 760-1035 15-267 (476)
150 4eut_A Serine/threonine-protei 100.0 2.3E-38 8E-43 364.4 18.8 277 761-1042 9-310 (396)
151 1mqb_A Ephrin type-A receptor 100.0 1.9E-38 6.6E-43 356.4 17.4 262 761-1046 44-314 (333)
152 2xir_A Vascular endothelial gr 100.0 1.3E-38 4.6E-43 355.5 15.9 269 752-1043 18-312 (316)
153 3kn6_A Ribosomal protein S6 ki 100.0 2.3E-38 7.8E-43 354.2 17.7 249 766-1035 16-271 (325)
154 4hgt_A Casein kinase I isoform 100.0 5.5E-38 1.9E-42 347.0 20.5 265 759-1045 7-284 (296)
155 2ac3_A MAP kinase-interacting 100.0 1.6E-38 5.3E-43 355.0 16.1 268 761-1035 12-296 (316)
156 1o6v_A Internalin A; bacterial 100.0 3.4E-37 1.2E-41 363.2 28.4 346 245-652 44-389 (466)
157 1o6v_A Internalin A; bacterial 100.0 1.9E-37 6.4E-42 365.4 26.0 345 198-628 45-389 (466)
158 1fvr_A Tyrosine-protein kinase 100.0 2.3E-38 8E-43 355.2 17.4 262 761-1048 25-307 (327)
159 3hko_A Calcium/calmodulin-depe 100.0 1.7E-38 5.8E-43 359.4 16.4 259 756-1035 21-331 (345)
160 2eue_A Carbon catabolite derep 100.0 1.9E-38 6.5E-43 346.6 16.1 248 760-1036 12-264 (275)
161 3f66_A Hepatocyte growth facto 100.0 2.2E-38 7.4E-43 350.6 16.6 260 761-1044 25-294 (298)
162 3g33_A Cell division protein k 100.0 5.3E-38 1.8E-42 349.2 19.6 269 760-1035 8-297 (308)
163 2buj_A Serine/threonine-protei 100.0 2.3E-38 7.8E-43 353.8 16.5 260 760-1041 28-306 (317)
164 3fdn_A Serine/threonine-protei 100.0 2.6E-38 8.8E-43 346.4 16.5 248 760-1036 8-259 (279)
165 2h34_A Serine/threonine-protei 100.0 2.5E-38 8.6E-43 351.7 16.5 261 760-1043 33-298 (309)
166 3uzp_A CKI-delta, CKID, casein 100.0 1.2E-37 4.1E-42 344.3 21.6 264 760-1045 8-284 (296)
167 3kk8_A Calcium/calmodulin depe 100.0 3.9E-38 1.4E-42 345.9 17.5 252 760-1035 5-262 (284)
168 3ork_A Serine/threonine protei 100.0 7.3E-39 2.5E-43 356.5 11.8 258 760-1039 11-279 (311)
169 1p4o_A Insulin-like growth fac 100.0 4.4E-39 1.5E-43 360.5 10.0 265 755-1043 19-301 (322)
170 3pls_A Macrophage-stimulating 100.0 6E-38 2.1E-42 347.1 18.8 260 762-1044 22-290 (298)
171 2yex_A Serine/threonine-protei 100.0 5.6E-38 1.9E-42 343.1 18.3 253 760-1035 6-262 (276)
172 3dbq_A Dual specificity protei 100.0 2.2E-38 7.4E-43 357.7 15.3 252 760-1036 8-275 (343)
173 3dls_A PAS domain-containing s 100.0 1.7E-38 5.7E-43 356.7 14.2 242 760-1035 23-275 (335)
174 4agu_A Cyclin-dependent kinase 100.0 3.8E-38 1.3E-42 350.9 17.1 270 761-1035 3-285 (311)
175 3mtl_A Cell division protein k 100.0 1.5E-38 5.3E-43 355.9 13.6 270 761-1035 2-282 (324)
176 3gxj_A TGF-beta receptor type- 100.0 1.3E-39 4.4E-44 361.4 4.8 267 761-1043 3-299 (303)
177 2jii_A Serine/threonine-protei 100.0 2E-38 6.7E-43 359.5 14.4 265 761-1045 42-340 (352)
178 2wqm_A Serine/threonine-protei 100.0 1.1E-37 3.7E-42 347.1 20.0 263 760-1044 31-300 (310)
179 1b6c_B TGF-B superfamily recep 100.0 3.1E-37 1.1E-41 348.6 24.0 271 757-1043 38-338 (342)
180 3llt_A Serine/threonine kinase 100.0 6.2E-38 2.1E-42 356.9 18.4 278 747-1035 21-356 (360)
181 2ozo_A Tyrosine-protein kinase 100.0 3.9E-38 1.3E-42 381.2 17.5 252 768-1044 343-601 (613)
182 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.4E-37 4.9E-42 354.3 21.2 252 760-1043 64-341 (365)
183 3is5_A Calcium-dependent prote 100.0 5.9E-38 2E-42 344.5 17.2 250 761-1035 22-279 (285)
184 1xbb_A Tyrosine-protein kinase 100.0 3.4E-38 1.1E-42 347.7 15.3 259 760-1044 15-282 (291)
185 2h8h_A Proto-oncogene tyrosine 100.0 1.3E-38 4.4E-43 380.1 12.9 257 760-1042 266-524 (535)
186 2acx_A G protein-coupled recep 100.0 1.1E-37 3.9E-42 367.9 20.8 251 760-1035 183-445 (576)
187 3oz6_A Mitogen-activated prote 100.0 1.8E-38 6E-43 364.9 13.6 269 759-1035 7-329 (388)
188 3brb_A Proto-oncogene tyrosine 100.0 7.1E-38 2.4E-42 349.1 18.1 263 758-1044 31-311 (313)
189 2qr7_A Ribosomal protein S6 ki 100.0 2.7E-38 9.4E-43 355.4 14.8 253 760-1037 21-280 (342)
190 3bhy_A Death-associated protei 100.0 1.1E-37 3.7E-42 342.3 19.0 258 761-1042 5-275 (283)
191 2v62_A Serine/threonine-protei 100.0 2.7E-38 9.2E-43 357.2 14.6 266 760-1041 36-328 (345)
192 1nxk_A MAP kinase-activated pr 100.0 1.4E-37 4.9E-42 357.5 20.1 250 761-1036 61-323 (400)
193 1u5q_A Serine/threonine protei 100.0 3.9E-38 1.3E-42 355.2 14.9 247 761-1036 54-307 (348)
194 4ejn_A RAC-alpha serine/threon 100.0 1.9E-38 6.5E-43 371.3 12.6 249 760-1035 147-405 (446)
195 2zmd_A Dual specificity protei 100.0 4.9E-38 1.7E-42 360.3 15.7 251 761-1036 56-322 (390)
196 1vzo_A Ribosomal protein S6 ki 100.0 3.2E-38 1.1E-42 357.6 13.7 255 760-1036 53-323 (355)
197 1ua2_A CAK, cell division prot 100.0 7.3E-38 2.5E-42 353.8 16.6 273 758-1035 7-292 (346)
198 2r5t_A Serine/threonine-protei 100.0 5.8E-38 2E-42 356.1 15.7 245 760-1031 37-286 (373)
199 2jam_A Calcium/calmodulin-depe 100.0 7.8E-38 2.7E-42 347.1 16.3 251 760-1035 8-262 (304)
200 3ttj_A Mitogen-activated prote 100.0 1.5E-37 5.1E-42 363.7 19.4 266 760-1035 61-356 (464)
201 1byg_A CSK, protein (C-termina 100.0 5.4E-38 1.8E-42 343.7 14.5 252 760-1042 20-274 (278)
202 2vgo_A Serine/threonine-protei 100.0 1.3E-37 4.6E-42 341.7 17.7 247 760-1035 13-263 (284)
203 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.2E-37 4.2E-42 367.2 18.4 253 761-1035 185-449 (543)
204 3com_A Serine/threonine-protei 100.0 1.9E-37 6.4E-42 345.9 18.5 251 760-1035 28-279 (314)
205 2y7j_A Phosphorylase B kinase 100.0 2.8E-37 9.4E-42 351.2 20.2 258 754-1035 87-360 (365)
206 3i6u_A CDS1, serine/threonine- 100.0 1.4E-37 4.7E-42 360.2 18.0 253 759-1035 133-400 (419)
207 3mi9_A Cell division protein k 100.0 3.9E-37 1.3E-41 348.9 21.2 272 760-1035 16-312 (351)
208 2j7t_A Serine/threonine-protei 100.0 4.3E-38 1.5E-42 349.0 12.8 253 760-1035 18-276 (302)
209 3byv_A Rhoptry kinase; malaria 100.0 2.3E-38 8E-43 362.3 10.8 251 760-1045 72-372 (377)
210 3mwu_A Calmodulin-domain prote 100.0 1.6E-37 5.4E-42 367.7 18.2 251 760-1035 21-277 (486)
211 2clq_A Mitogen-activated prote 100.0 2E-37 7E-42 342.3 17.8 252 761-1035 22-279 (295)
212 2rku_A Serine/threonine-protei 100.0 1.1E-37 3.8E-42 344.1 15.7 250 760-1036 14-267 (294)
213 3pg1_A Mitogen-activated prote 100.0 1.7E-37 5.8E-42 353.6 17.5 278 750-1035 11-317 (362)
214 3a7i_A MST3 kinase, serine/thr 100.0 2.8E-37 9.7E-42 342.5 18.8 249 761-1036 22-272 (303)
215 2a19_B Interferon-induced, dou 100.0 7.9E-38 2.7E-42 343.5 14.0 250 760-1044 10-277 (284)
216 3lij_A Calcium/calmodulin depe 100.0 2.2E-37 7.5E-42 367.1 18.5 250 761-1035 37-292 (494)
217 3gbz_A Kinase, CMGC CDK; ssgci 100.0 8.4E-38 2.9E-42 350.7 14.2 272 758-1035 31-319 (329)
218 3q5i_A Protein kinase; CDPK, m 100.0 3.5E-37 1.2E-41 366.3 20.2 251 760-1035 35-302 (504)
219 4fl3_A Tyrosine-protein kinase 100.0 1.5E-37 5E-42 376.9 17.2 252 767-1044 375-634 (635)
220 2owb_A Serine/threonine-protei 100.0 1.1E-37 3.6E-42 350.8 14.8 249 760-1035 40-292 (335)
221 3lm5_A Serine/threonine-protei 100.0 1.3E-37 4.5E-42 348.8 15.4 260 753-1035 20-288 (327)
222 3n9x_A Phosphotransferase; mal 100.0 1.3E-37 4.3E-42 362.3 15.4 200 760-964 25-254 (432)
223 3q60_A ROP5B; pseudokinase, tr 100.0 5.8E-38 2E-42 358.3 12.2 263 761-1044 62-364 (371)
224 1u46_A ACK-1, activated CDC42 100.0 6.7E-38 2.3E-42 345.4 12.3 258 761-1042 18-285 (291)
225 2h6d_A 5'-AMP-activated protei 100.0 2.4E-37 8.3E-42 338.1 16.5 248 760-1035 10-262 (276)
226 3nyv_A Calmodulin-domain prote 100.0 1.2E-37 4.1E-42 368.9 15.2 251 761-1036 26-283 (484)
227 2id5_A Lingo-1, leucine rich r 100.0 1.2E-36 4.3E-41 360.1 23.9 348 226-656 14-361 (477)
228 4aaa_A Cyclin-dependent kinase 100.0 1E-37 3.5E-42 350.5 13.8 270 760-1035 24-307 (331)
229 2yfx_A Tyrosine-protein kinase 100.0 1.2E-37 4.2E-42 349.3 14.4 260 760-1043 29-306 (327)
230 1t4h_A Serine/threonine-protei 100.0 4.6E-37 1.6E-41 338.5 18.6 247 762-1035 27-283 (290)
231 2pml_X PFPK7, Ser/Thr protein 100.0 2.4E-37 8.1E-42 350.5 16.7 266 760-1035 30-323 (348)
232 3ll6_A Cyclin G-associated kin 100.0 2.2E-37 7.5E-42 349.0 15.9 256 760-1043 27-310 (337)
233 3rp9_A Mitogen-activated prote 100.0 2.8E-37 9.5E-42 363.1 17.4 194 760-958 52-280 (458)
234 3nsz_A CK II alpha, casein kin 100.0 4.9E-37 1.7E-41 345.1 18.2 264 760-1035 35-320 (330)
235 3sv0_A Casein kinase I-like; t 100.0 1.2E-36 4E-41 355.9 21.9 264 760-1044 6-281 (483)
236 1cm8_A Phosphorylated MAP kina 100.0 3.1E-37 1.1E-41 350.9 16.3 263 760-1035 24-308 (367)
237 3eqc_A Dual specificity mitoge 100.0 1.3E-37 4.3E-42 354.3 13.1 268 760-1036 32-326 (360)
238 3pfq_A PKC-B, PKC-beta, protei 100.0 4.5E-37 1.6E-41 375.2 18.4 250 759-1035 339-598 (674)
239 1x8b_A WEE1HU, WEE1-like prote 100.0 2.5E-37 8.7E-42 340.3 14.5 244 760-1035 10-280 (289)
240 2j0j_A Focal adhesion kinase 1 100.0 1.9E-37 6.4E-42 377.4 14.6 260 759-1043 388-653 (656)
241 2xrw_A Mitogen-activated prote 100.0 4.8E-37 1.7E-41 350.4 17.1 264 760-1036 24-320 (371)
242 2w5a_A Serine/threonine-protei 100.0 5.4E-38 1.8E-42 343.9 8.8 253 760-1037 5-270 (279)
243 3fme_A Dual specificity mitoge 100.0 3E-37 1E-41 340.1 14.7 251 760-1035 6-267 (290)
244 2x7f_A TRAF2 and NCK-interacti 100.0 2E-37 6.8E-42 347.7 13.4 260 751-1035 14-287 (326)
245 3eb0_A Putative uncharacterize 100.0 6.3E-37 2.1E-41 351.2 17.8 272 758-1041 4-330 (383)
246 2r3i_A Cell division protein k 100.0 6.2E-37 2.1E-41 339.1 17.1 271 760-1035 2-284 (299)
247 1wak_A Serine/threonine-protei 100.0 4.1E-37 1.4E-41 355.3 16.0 266 760-1035 36-392 (397)
248 1phk_A Phosphorylase kinase; g 100.0 6.9E-37 2.4E-41 338.5 16.9 253 759-1035 15-284 (298)
249 2ycf_A Serine/threonine-protei 100.0 8E-37 2.7E-41 341.9 17.5 252 760-1035 9-275 (322)
250 2vwi_A Serine/threonine-protei 100.0 1.8E-37 6.2E-42 344.1 11.9 262 759-1035 13-288 (303)
251 3an0_A Dual specificity mitoge 100.0 6.6E-37 2.3E-41 345.5 15.8 252 759-1035 49-311 (340)
252 3kvw_A DYRK2, dual specificity 100.0 5.9E-37 2E-41 355.8 15.4 197 760-965 96-302 (429)
253 2wtk_C Serine/threonine-protei 100.0 1.6E-36 5.5E-41 336.8 18.1 251 760-1036 4-265 (305)
254 4fcg_A Uncharacterized protein 100.0 7E-37 2.4E-41 342.0 15.1 270 26-307 23-313 (328)
255 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.7E-37 5.8E-42 347.1 10.0 262 758-1045 30-306 (319)
256 2wei_A Calmodulin-domain prote 100.0 1.5E-36 5.2E-41 333.7 16.5 251 760-1035 21-277 (287)
257 2fst_X Mitogen-activated prote 100.0 4.6E-37 1.6E-41 349.0 12.6 264 760-1035 28-312 (367)
258 3qyz_A Mitogen-activated prote 100.0 1.5E-36 5.1E-41 345.6 16.9 268 760-1035 26-314 (364)
259 1zy4_A Serine/threonine-protei 100.0 1.1E-36 3.9E-41 337.6 15.3 252 760-1035 5-284 (303)
260 4e7w_A Glycogen synthase kinas 100.0 1.1E-36 3.6E-41 350.0 15.5 264 761-1035 40-322 (394)
261 2i6l_A Mitogen-activated prote 100.0 1.1E-36 3.7E-41 340.7 14.7 269 760-1035 10-306 (320)
262 1blx_A Cyclin-dependent kinase 100.0 3E-36 1E-40 338.1 18.3 270 759-1035 9-297 (326)
263 1j1b_A Glycogen synthase kinas 100.0 2.2E-36 7.5E-41 350.2 16.7 263 761-1035 54-337 (420)
264 3cek_A Dual specificity protei 100.0 6.4E-37 2.2E-41 341.3 11.7 260 752-1036 19-294 (313)
265 4exu_A Mitogen-activated prote 100.0 2.4E-36 8.2E-41 344.6 15.5 264 760-1035 41-324 (371)
266 3e3p_A Protein kinase, putativ 100.0 4.4E-36 1.5E-40 341.8 17.4 276 754-1035 16-315 (360)
267 3o6n_A APL1; leucine-rich repe 100.0 2.8E-35 9.6E-40 338.7 23.6 347 52-483 4-352 (390)
268 2b9h_A MAP kinase FUS3, mitoge 100.0 2.1E-36 7.3E-41 343.3 14.0 269 760-1035 10-306 (353)
269 3rgf_A Cyclin-dependent kinase 100.0 3.3E-36 1.1E-40 348.0 15.8 267 763-1035 22-334 (405)
270 1z57_A Dual specificity protei 100.0 5.8E-36 2E-40 337.7 17.5 265 760-1035 13-329 (339)
271 2iwi_A Serine/threonine-protei 100.0 1.7E-36 5.9E-41 337.7 11.7 245 756-1035 26-284 (312)
272 3fhr_A MAP kinase-activated pr 100.0 9E-36 3.1E-40 335.0 17.3 253 760-1036 27-289 (336)
273 2rio_A Serine/threonine-protei 100.0 7.9E-36 2.7E-40 347.1 17.4 250 762-1035 16-296 (434)
274 2vx3_A Dual specificity tyrosi 100.0 9.9E-36 3.4E-40 341.1 17.9 200 759-965 52-261 (382)
275 1q8y_A SR protein kinase; tran 100.0 4E-36 1.4E-40 343.9 14.0 267 760-1035 18-334 (373)
276 3aln_A Dual specificity mitoge 100.0 4.8E-36 1.7E-40 336.4 14.1 254 760-1035 21-286 (327)
277 3oja_B Anopheles plasmodium-re 100.0 5.5E-35 1.9E-39 354.9 24.2 345 52-484 10-359 (597)
278 3a99_A Proto-oncogene serine/t 100.0 2.3E-36 8E-41 337.5 10.8 242 759-1035 41-294 (320)
279 3coi_A Mitogen-activated prote 100.0 9.8E-36 3.3E-40 337.6 15.9 264 760-1035 23-306 (353)
280 3p23_A Serine/threonine-protei 100.0 5.4E-36 1.8E-40 347.2 13.9 249 761-1035 24-284 (432)
281 3o6n_A APL1; leucine-rich repe 100.0 4.7E-35 1.6E-39 336.8 21.1 336 293-678 43-378 (390)
282 2dyl_A Dual specificity mitoge 100.0 5.9E-36 2E-40 334.4 12.5 252 760-1035 24-284 (318)
283 2eu9_A Dual specificity protei 100.0 1.8E-35 6.2E-40 335.9 16.8 265 760-1035 18-334 (355)
284 3oja_B Anopheles plasmodium-re 100.0 9.2E-35 3.1E-39 353.0 21.3 335 294-678 50-384 (597)
285 3qa8_A MGC80376 protein; kinas 100.0 1.6E-35 5.3E-40 352.6 13.7 272 760-1040 13-308 (676)
286 1ogq_A PGIP-2, polygalacturona 100.0 6.1E-35 2.1E-39 324.3 16.2 255 423-679 51-309 (313)
287 3uqc_A Probable conserved tran 100.0 2.2E-34 7.4E-39 315.3 18.0 232 761-1042 31-266 (286)
288 4fmz_A Internalin; leucine ric 100.0 1.6E-33 5.6E-38 318.7 24.8 307 291-651 40-346 (347)
289 3m2w_A MAP kinase-activated pr 100.0 7.4E-34 2.5E-38 314.1 18.5 231 761-1036 17-258 (299)
290 3dzo_A Rhoptry kinase domain; 100.0 2.2E-34 7.5E-39 332.6 14.3 248 762-1044 79-375 (413)
291 2pzi_A Probable serine/threoni 100.0 3.1E-34 1E-38 353.1 16.0 242 761-1043 80-330 (681)
292 4fmz_A Internalin; leucine ric 100.0 7.8E-33 2.7E-37 313.1 24.2 308 266-627 39-346 (347)
293 2ft3_A Biglycan; proteoglycan, 100.0 5.8E-32 2E-36 303.7 24.2 288 296-649 34-331 (332)
294 2ft3_A Biglycan; proteoglycan, 100.0 6.6E-32 2.3E-36 303.2 24.3 297 271-625 33-331 (332)
295 2vuw_A Serine/threonine-protei 100.0 1E-33 3.4E-38 318.7 9.2 245 760-1035 19-332 (336)
296 1xku_A Decorin; proteoglycan, 100.0 1.1E-31 3.9E-36 301.1 24.3 288 296-648 32-329 (330)
297 1xku_A Decorin; proteoglycan, 100.0 3.2E-31 1.1E-35 297.4 25.5 289 224-553 32-330 (330)
298 1z7x_W Ribonuclease inhibitor; 100.0 1.2E-35 4E-40 350.3 -15.7 385 248-653 4-442 (461)
299 4fcg_A Uncharacterized protein 100.0 5.8E-33 2E-37 310.3 0.2 235 121-382 81-315 (328)
300 1z7x_W Ribonuclease inhibitor; 100.0 1.8E-34 6.1E-39 340.2 -13.2 357 270-653 2-413 (461)
301 2z80_A TOLL-like receptor 2, v 100.0 1.2E-30 4.3E-35 295.5 16.3 288 53-382 22-315 (353)
302 2z80_A TOLL-like receptor 2, v 100.0 6.1E-30 2.1E-34 289.8 15.9 281 342-656 29-319 (353)
303 2z66_A Variable lymphocyte rec 100.0 1.1E-29 3.7E-34 281.8 14.6 252 60-358 6-262 (306)
304 1wwl_A Monocyte differentiatio 100.0 1.7E-30 5.7E-35 288.7 8.0 253 95-382 41-310 (312)
305 1wwl_A Monocyte differentiatio 100.0 3.2E-30 1.1E-34 286.4 9.7 253 117-412 39-311 (312)
306 3zyi_A Leucine-rich repeat-con 100.0 1.1E-28 3.7E-33 289.3 21.7 251 400-656 57-308 (452)
307 2z66_A Variable lymphocyte rec 100.0 4.4E-29 1.5E-33 276.9 16.2 233 423-656 29-266 (306)
308 3ogk_B Coronatine-insensitive 100.0 3.3E-31 1.1E-35 322.9 -1.3 379 245-629 110-528 (592)
309 3zyj_A Leucine-rich repeat-con 100.0 1.6E-28 5.4E-33 286.9 21.2 232 423-656 65-297 (440)
310 3ogk_B Coronatine-insensitive 100.0 2.6E-31 9E-36 323.7 -3.7 454 60-528 41-548 (592)
311 1ozn_A Reticulon 4 receptor; N 100.0 6.1E-29 2.1E-33 272.6 14.6 252 400-656 14-266 (285)
312 1ozn_A Reticulon 4 receptor; N 100.0 3.6E-28 1.2E-32 266.5 18.5 252 424-678 13-265 (285)
313 3g06_A SSPH2 (leucine-rich rep 100.0 2.3E-28 7.7E-33 293.4 17.7 286 52-417 13-304 (622)
314 3zyi_A Leucine-rich repeat-con 99.9 4.2E-27 1.4E-31 275.8 20.5 229 398-629 76-305 (452)
315 3o53_A Protein LRIM1, AGAP0063 99.9 1.1E-28 3.7E-33 274.8 6.4 258 100-378 13-272 (317)
316 3zyj_A Leucine-rich repeat-con 99.9 1.9E-26 6.6E-31 269.2 23.2 245 227-507 47-292 (440)
317 3g06_A SSPH2 (leucine-rich rep 99.9 2.8E-26 9.7E-31 275.2 24.1 269 295-638 40-308 (622)
318 4azs_A Methyltransferase WBDD; 99.9 2.7E-28 9.3E-33 291.1 5.8 186 768-962 241-438 (569)
319 3o53_A Protein LRIM1, AGAP0063 99.9 1.4E-28 4.7E-33 274.0 2.6 267 345-655 11-280 (317)
320 3oja_A Leucine-rich immune mol 99.9 2.9E-27 1E-31 278.5 10.0 236 120-376 33-270 (487)
321 3oja_A Leucine-rich immune mol 99.9 3.6E-27 1.2E-31 277.7 10.1 234 398-646 35-270 (487)
322 2z62_A TOLL-like receptor 4, v 99.9 4.1E-26 1.4E-30 248.8 15.7 211 446-657 28-243 (276)
323 2p1m_B Transport inhibitor res 99.9 2.9E-30 9.9E-35 314.7 -20.2 206 60-276 34-270 (594)
324 2o6q_A Variable lymphocyte rec 99.9 6.4E-26 2.2E-30 246.2 15.3 217 58-308 2-218 (270)
325 2p1m_B Transport inhibitor res 99.9 7.1E-29 2.4E-33 302.4 -12.2 208 442-651 310-544 (594)
326 2o6q_A Variable lymphocyte rec 99.9 5.2E-25 1.8E-29 239.0 19.3 206 448-656 18-223 (270)
327 2z62_A TOLL-like receptor 4, v 99.9 8.3E-25 2.8E-29 238.4 16.3 208 423-631 29-241 (276)
328 1p9a_G Platelet glycoprotein I 99.9 7.8E-25 2.7E-29 239.6 15.7 207 442-655 6-212 (290)
329 3rfs_A Internalin B, repeat mo 99.9 2E-24 6.9E-29 234.6 14.0 231 95-369 17-247 (272)
330 3rfs_A Internalin B, repeat mo 99.9 1.4E-24 4.9E-29 235.7 11.3 160 490-656 81-240 (272)
331 3en9_A Glycoprotease, O-sialog 99.9 1.4E-24 4.9E-29 257.5 12.3 185 764-963 339-539 (540)
332 1p9a_G Platelet glycoprotein I 99.9 2.4E-23 8.1E-28 227.8 17.1 205 393-629 6-210 (290)
333 2ast_B S-phase kinase-associat 99.9 4.6E-26 1.6E-30 256.2 -5.9 268 58-366 34-315 (336)
334 3m19_A Variable lymphocyte rec 99.9 1.5E-23 5.2E-28 224.7 13.5 190 59-260 3-192 (251)
335 3cvr_A Invasion plasmid antige 99.9 7.1E-24 2.4E-28 251.1 8.4 208 53-296 35-255 (571)
336 2xwt_C Thyrotropin receptor; s 99.9 5E-23 1.7E-27 219.1 14.0 196 423-648 32-236 (239)
337 4glp_A Monocyte differentiatio 99.9 2.7E-23 9.2E-28 230.4 12.2 201 446-652 91-308 (310)
338 3goz_A Leucine-rich repeat-con 99.9 1.3E-24 4.3E-29 246.7 1.0 111 102-214 3-124 (362)
339 3goz_A Leucine-rich repeat-con 99.9 1.2E-24 3.9E-29 247.1 0.5 251 402-653 3-299 (362)
340 3m19_A Variable lymphocyte rec 99.9 1.3E-22 4.5E-27 217.4 15.9 180 447-653 15-194 (251)
341 4glp_A Monocyte differentiatio 99.9 3.1E-23 1.1E-27 229.9 11.1 201 423-628 92-308 (310)
342 2xwt_C Thyrotropin receptor; s 99.9 1.7E-22 6E-27 214.8 16.1 197 397-624 31-236 (239)
343 2ca6_A RAN GTPase-activating p 99.9 3.7E-25 1.3E-29 253.7 -5.1 243 112-360 23-319 (386)
344 2ca6_A RAN GTPase-activating p 99.9 3.4E-25 1.2E-29 254.0 -6.3 248 88-337 23-320 (386)
345 2ast_B S-phase kinase-associat 99.9 9.1E-24 3.1E-28 237.5 1.0 249 123-386 49-311 (336)
346 1h6u_A Internalin H; cell adhe 99.9 4.7E-22 1.6E-26 219.8 14.7 190 423-652 42-231 (308)
347 4ay9_X Follicle-stimulating ho 99.9 1E-21 3.4E-26 221.6 17.3 201 125-334 13-216 (350)
348 1h6u_A Internalin H; cell adhe 99.9 3E-22 1E-26 221.4 12.7 211 345-603 20-230 (308)
349 3cvr_A Invasion plasmid antige 99.9 4.6E-22 1.6E-26 235.6 11.3 192 122-369 60-255 (571)
350 2o6s_A Variable lymphocyte rec 99.9 1.4E-21 4.9E-26 202.9 13.2 185 60-272 6-190 (208)
351 4ay9_X Follicle-stimulating ho 99.9 1.8E-21 6E-26 219.6 14.9 223 273-529 32-257 (350)
352 1zar_A RIO2 kinase; serine kin 99.9 5.6E-22 1.9E-26 215.4 9.0 165 753-947 82-274 (282)
353 4b8c_D Glucose-repressible alc 99.8 7.3E-22 2.5E-26 243.1 5.4 228 27-288 129-358 (727)
354 2v70_A SLIT-2, SLIT homolog 2 99.8 6.9E-21 2.3E-25 199.2 9.1 157 497-656 14-171 (220)
355 1dce_A Protein (RAB geranylger 99.8 9E-23 3.1E-27 243.3 -6.1 216 94-350 346-566 (567)
356 2o6s_A Variable lymphocyte rec 99.8 2.7E-20 9.2E-25 193.3 13.4 161 447-638 29-189 (208)
357 2v9t_B SLIT homolog 2 protein 99.8 1.1E-20 3.9E-25 197.5 9.2 157 497-656 14-170 (220)
358 2xot_A Amphoterin-induced prot 99.8 2.5E-20 8.4E-25 211.1 11.2 180 449-655 21-206 (361)
359 3e6j_A Variable lymphocyte rec 99.8 6.1E-20 2.1E-24 193.4 13.4 164 54-263 12-175 (229)
360 1m9s_A Internalin B; cell inva 99.8 3.5E-19 1.2E-23 213.5 14.8 192 95-308 19-210 (605)
361 1h6t_A Internalin B; cell adhe 99.8 3.1E-19 1.1E-23 195.3 12.8 172 443-652 43-214 (291)
362 3e6j_A Variable lymphocyte rec 99.8 4.4E-19 1.5E-23 186.8 13.1 155 497-655 22-176 (229)
363 1h6t_A Internalin B; cell adhe 99.8 3.8E-19 1.3E-23 194.6 12.7 168 422-603 46-213 (291)
364 1m9s_A Internalin B; cell inva 99.8 3.7E-19 1.3E-23 213.3 13.4 183 93-295 39-221 (605)
365 2v70_A SLIT-2, SLIT homolog 2 99.8 5.6E-19 1.9E-23 184.7 12.2 135 497-631 35-170 (220)
366 2v9t_B SLIT homolog 2 protein 99.8 6.3E-19 2.1E-23 184.3 12.5 134 495-628 33-166 (220)
367 1dce_A Protein (RAB geranylger 99.8 5.3E-21 1.8E-25 228.0 -3.8 220 142-404 346-567 (567)
368 2xot_A Amphoterin-induced prot 99.8 3.1E-19 1.1E-23 202.0 10.6 181 424-628 20-203 (361)
369 1xeu_A Internalin C; cellular 99.7 4.6E-19 1.6E-23 190.8 5.4 168 445-627 18-185 (263)
370 1xeu_A Internalin C; cellular 99.7 2.8E-18 9.6E-23 184.6 11.4 171 95-286 17-187 (263)
371 1w8a_A SLIT protein; signaling 99.7 1.7E-18 5.8E-23 176.9 7.2 131 497-630 11-142 (192)
372 4ezg_A Putative uncharacterize 99.7 6.1E-18 2.1E-22 173.7 10.8 153 467-651 41-194 (197)
373 4ezg_A Putative uncharacterize 99.7 8.7E-18 3E-22 172.5 11.7 150 516-672 42-192 (197)
374 4b8c_D Glucose-repressible alc 99.7 1.1E-18 3.8E-23 214.7 4.3 198 430-654 209-407 (727)
375 1zth_A RIO1 serine protein kin 99.7 4.6E-18 1.6E-22 182.4 8.1 138 762-911 48-219 (258)
376 1w8a_A SLIT protein; signaling 99.7 2.3E-17 7.7E-22 168.5 11.5 155 521-678 11-166 (192)
377 3sb4_A Hypothetical leucine ri 99.7 5.6E-18 1.9E-22 189.2 6.8 260 270-547 48-326 (329)
378 3sb4_A Hypothetical leucine ri 99.7 1.4E-17 4.9E-22 185.9 4.5 101 542-644 226-327 (329)
379 2wfh_A SLIT homolog 2 protein 99.7 6.9E-17 2.4E-21 164.8 7.7 131 522-656 14-144 (193)
380 2ell_A Acidic leucine-rich nuc 99.6 6.8E-16 2.3E-20 153.9 10.4 133 518-652 24-161 (168)
381 2ell_A Acidic leucine-rich nuc 99.6 4.5E-16 1.5E-20 155.2 8.1 136 470-632 24-164 (168)
382 4gyi_A RIO2 kinase; protein ki 99.6 3.4E-16 1.2E-20 173.4 7.9 145 754-912 88-266 (397)
383 2o6r_A Variable lymphocyte rec 99.6 1.2E-15 4.1E-20 153.6 10.6 113 543-655 29-141 (177)
384 2je0_A Acidic leucine-rich nuc 99.6 7.7E-16 2.6E-20 150.1 7.8 128 518-647 17-149 (149)
385 2o6r_A Variable lymphocyte rec 99.6 4E-15 1.4E-19 149.8 11.4 133 496-631 9-141 (177)
386 2wfh_A SLIT homolog 2 protein 99.6 3.6E-15 1.2E-19 152.0 10.8 129 497-629 13-141 (193)
387 4fdw_A Leucine rich hypothetic 99.6 1.5E-14 5E-19 164.9 16.9 264 344-650 113-382 (401)
388 4fdw_A Leucine rich hypothetic 99.6 3.7E-14 1.3E-18 161.5 20.0 247 345-627 136-383 (401)
389 2je0_A Acidic leucine-rich nuc 99.6 3.2E-15 1.1E-19 145.8 8.3 126 423-550 18-148 (149)
390 1ds9_A Outer arm dynein; leuci 99.6 6.3E-17 2.1E-21 166.2 -5.2 137 117-264 14-157 (198)
391 1ds9_A Outer arm dynein; leuci 99.5 1.2E-16 4.1E-21 164.1 -4.9 155 466-651 14-185 (198)
392 4fs7_A Uncharacterized protein 99.5 2E-13 7E-18 156.2 21.1 310 241-598 65-374 (394)
393 1a9n_A U2A', U2A'; complex (nu 99.5 6.7E-15 2.3E-19 147.9 6.7 133 514-652 15-154 (176)
394 4fs7_A Uncharacterized protein 99.5 3.7E-13 1.3E-17 154.0 18.4 335 259-643 59-393 (394)
395 3g39_A Variable lymphocyte rec 99.5 5.1E-14 1.7E-18 140.3 9.4 109 545-656 12-120 (170)
396 1a9n_A U2A', U2A'; complex (nu 99.5 4.3E-14 1.5E-18 141.9 8.3 133 394-532 16-154 (176)
397 2r9u_A Variable lymphocyte rec 99.4 1.5E-13 5.3E-18 137.3 9.4 90 566-655 33-122 (174)
398 3g39_A Variable lymphocyte rec 99.4 4.9E-13 1.7E-17 133.1 11.3 109 520-631 11-119 (170)
399 2r9u_A Variable lymphocyte rec 99.4 7.1E-13 2.4E-17 132.4 8.7 106 521-629 15-120 (174)
400 3un9_A NLR family member X1; l 99.3 4.4E-14 1.5E-18 159.3 -6.2 170 446-635 72-260 (372)
401 2ifg_A High affinity nerve gro 99.3 3.1E-12 1.1E-16 143.7 8.8 92 113-212 24-116 (347)
402 3un9_A NLR family member X1; l 99.3 2.4E-13 8.3E-18 153.2 -2.6 135 518-652 101-253 (372)
403 4gt6_A Cell surface protein; l 99.3 9.9E-11 3.4E-15 133.8 19.1 64 559-626 327-390 (394)
404 3tm0_A Aminoglycoside 3'-phosp 99.2 1.9E-11 6.4E-16 131.5 11.6 146 757-909 10-212 (263)
405 4gt6_A Cell surface protein; l 99.2 2.6E-10 9E-15 130.3 21.7 331 288-650 56-390 (394)
406 2ifg_A High affinity nerve gro 99.2 1E-11 3.4E-16 139.6 8.7 103 522-627 12-116 (347)
407 3rw6_A Nuclear RNA export fact 99.1 1.9E-12 6.6E-17 136.7 -3.6 149 60-216 77-237 (267)
408 1nd4_A Aminoglycoside 3'-phosp 99.1 1.4E-10 4.8E-15 124.4 8.2 137 762-910 21-214 (264)
409 2ra8_A Uncharacterized protein 98.9 8E-11 2.7E-15 131.4 -1.2 161 137-306 164-341 (362)
410 4h09_A Hypothetical leucine ri 98.9 4.3E-08 1.5E-12 111.3 20.8 108 440-550 211-318 (379)
411 4h09_A Hypothetical leucine ri 98.9 1.6E-08 5.5E-13 114.8 17.2 163 445-637 193-355 (379)
412 3dxp_A Putative acyl-COA dehyd 98.9 4.6E-09 1.6E-13 118.3 10.9 143 765-911 42-249 (359)
413 2ra8_A Uncharacterized protein 98.8 9.5E-10 3.3E-14 122.6 4.0 84 564-649 250-341 (362)
414 3sg8_A APH(2'')-ID; antibiotic 98.8 2.7E-09 9.1E-14 117.2 4.9 187 766-963 25-288 (304)
415 3r70_A Aminoglycoside phosphot 98.5 5E-07 1.7E-11 99.7 11.8 138 762-912 38-239 (320)
416 3rw6_A Nuclear RNA export fact 98.4 3.3E-08 1.1E-12 104.3 0.5 93 93-187 137-238 (267)
417 3d1u_A Putative fructosamine-3 98.4 1.8E-06 6.1E-11 93.2 13.0 76 765-844 19-97 (288)
418 1io0_A Tropomodulin; LRR prote 98.3 5.8E-08 2E-12 97.6 -0.5 122 510-651 28-164 (185)
419 4gkh_A Aminoglycoside 3'-phosp 98.3 2.7E-06 9.2E-11 91.3 12.6 135 768-910 31-223 (272)
420 1io0_A Tropomodulin; LRR prote 98.3 4.6E-08 1.6E-12 98.3 -1.6 121 487-627 29-164 (185)
421 3tdw_A Gentamicin resistance p 98.3 3.1E-06 1E-10 92.5 11.7 136 766-910 24-224 (306)
422 3ovc_A Hygromycin-B 4-O-kinase 98.2 4.5E-06 1.5E-10 93.4 12.6 77 763-845 43-122 (362)
423 3ats_A Putative uncharacterize 98.2 3.5E-06 1.2E-10 94.4 9.8 80 767-846 26-122 (357)
424 2olc_A MTR kinase, methylthior 97.8 8.7E-05 3E-09 84.3 12.4 75 766-842 35-120 (397)
425 3e4g_A ATP synthase subunit S, 97.8 1.2E-05 4E-10 78.5 4.2 83 567-649 62-150 (176)
426 2q83_A YTAA protein; 2635576, 97.8 9.8E-05 3.3E-09 82.0 11.8 138 767-909 38-251 (346)
427 2pyw_A Uncharacterized protein 97.7 4.7E-05 1.6E-09 87.2 8.6 80 879-959 231-313 (420)
428 3f7w_A Putative fructosamine-3 97.7 0.00012 4.1E-09 79.1 10.8 78 763-844 17-97 (288)
429 3jr1_A Putative fructosamine-3 97.7 0.00028 9.6E-09 76.5 13.3 136 766-906 41-232 (312)
430 3e4g_A ATP synthase subunit S, 97.7 1.2E-05 4E-10 78.5 2.0 85 543-627 62-153 (176)
431 2ppq_A HSK, HK, homoserine kin 97.3 0.00052 1.8E-08 75.3 9.8 156 751-909 7-216 (322)
432 3rfe_A Platelet glycoprotein I 97.3 0.00028 9.4E-09 65.7 5.9 60 594-655 12-72 (130)
433 3dxq_A Choline/ethanolamine ki 97.1 0.0013 4.6E-08 71.2 10.4 132 763-911 20-203 (301)
434 1pgv_A TMD-1, tropomodulin TMD 97.1 0.00012 3.9E-09 72.9 0.8 88 562-649 66-168 (197)
435 3csv_A Aminoglycoside phosphot 97.0 0.0042 1.4E-07 68.3 13.1 140 767-911 24-218 (333)
436 3feg_A Choline/ethanolamine ki 97.0 0.0024 8.3E-08 71.1 11.0 140 766-910 55-254 (379)
437 1nw1_A Choline kinase (49.2 KD 97.0 0.0018 6E-08 74.0 10.1 72 767-844 79-159 (429)
438 1zyl_A Hypothetical protein YI 97.0 0.0032 1.1E-07 69.1 11.6 157 750-910 10-223 (328)
439 1pgv_A TMD-1, tropomodulin TMD 96.9 0.0001 3.5E-09 73.3 -0.8 116 492-627 39-170 (197)
440 2qg7_A Ethanolamine kinase PV0 96.6 0.0059 2E-07 69.9 10.8 73 767-844 114-188 (458)
441 2yle_A Protein spire homolog 1 96.6 0.0055 1.9E-07 61.0 8.7 102 843-961 34-135 (229)
442 3rfe_A Platelet glycoprotein I 96.5 0.0024 8.2E-08 59.2 5.2 57 570-628 12-69 (130)
443 3c5i_A Choline kinase; choline 96.4 0.0052 1.8E-07 68.7 8.0 73 767-844 39-121 (369)
444 3i1a_A Spectinomycin phosphotr 96.4 0.025 8.7E-07 62.1 13.3 67 771-844 33-108 (339)
445 3f2s_A CK, chetk-alpha, cholin 96.1 0.015 5.1E-07 65.0 9.7 139 767-909 58-279 (401)
446 3mes_A Choline kinase; malaria 95.4 0.021 7.1E-07 64.5 7.4 74 766-844 75-157 (424)
447 3g15_A CK, chetk-alpha, cholin 92.4 0.37 1.2E-05 54.1 9.9 30 881-910 245-280 (401)
448 4ann_A ESSB; membrane protein, 78.8 4.1 0.00014 40.5 7.2 130 807-971 36-166 (215)
449 2ks1_B Epidermal growth factor 75.6 1.3 4.6E-05 31.4 1.9 8 716-723 31-38 (44)
450 3cxl_A N-chimerin; SH2, RHO-GA 64.9 0.75 2.6E-05 52.5 -2.1 60 765-827 146-214 (463)
451 4ano_A ESSB; membrane protein, 63.6 15 0.00051 36.6 7.3 115 815-964 48-164 (219)
452 2l2t_A Receptor tyrosine-prote 57.0 6.1 0.00021 28.0 2.2 8 716-723 30-37 (44)
453 2x6h_A GH13170P, VPS34, phosph 43.7 1.9E+02 0.0064 34.2 13.4 25 885-909 551-575 (696)
454 3ls8_A Phosphatidylinositol 3- 40.7 2.5E+02 0.0084 32.6 13.5 82 820-909 402-501 (614)
455 2ks1_B Epidermal growth factor 31.0 53 0.0018 23.3 3.6 30 701-730 13-42 (44)
456 2l2t_A Receptor tyrosine-prote 28.9 56 0.0019 23.1 3.4 31 701-731 12-42 (44)
457 2lz0_A Uncharacterized protein 26.7 1E+02 0.0034 26.2 5.6 44 458-502 8-51 (100)
458 2lz0_A Uncharacterized protein 25.9 1.4E+02 0.0049 25.2 6.5 48 433-481 7-54 (100)
459 1cja_A Protein (actin-fragmin 23.3 1.1E+02 0.0039 32.3 6.2 135 767-910 75-237 (342)
460 3ox7_P MH027; urokinase-type p 21.5 20 0.00067 20.3 0.0 9 59-67 6-14 (23)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=3.4e-90 Score=864.74 Aligned_cols=649 Identities=30% Similarity=0.490 Sum_probs=466.4
Q ss_pred hhccCChhhHHHHHHHHHhcccCCCCcccccCCCCCCCceeeeEEEcCCCCcEEEEEEeccccccc---cCCCCCCcchh
Q 039290 23 AAVTNVTTDQFALLALKEHIKHDPSNLLANNWSTTSSVCSWIGVTCGVRNRRVTALNISYLGLTGT---IPPQLGNLSFL 99 (1049)
Q Consensus 23 ~~~~~~~~d~~all~~k~~~~~~~~~~l~~~w~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~---~~~~~~~l~~L 99 (1049)
+++.+.++|++|||+||+++. ||. .+ ++|+.+++||+|+||+|+ ++||++|+|++.++.|. +|+++++|++|
T Consensus 5 ~~~~~~~~~~~all~~k~~~~-~~~-~l-~~W~~~~~~C~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L 79 (768)
T 3rgz_A 5 SPSQSLYREIHQLISFKDVLP-DKN-LL-PDWSSNKNPCTFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGL 79 (768)
T ss_dssp ---CCHHHHHHHHHHHHTTCS-CTT-SS-TTCCTTSCGGGSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTTCTTC
T ss_pred ccccCCHHHHHHHHHHHhhCC-Ccc-cc-cCCCCCCCCcCCcceEEC--CCcEEEEECCCCCcCCccCccChhHhccCcc
Confidence 344456899999999999996 887 66 599988999999999998 68999999999999998 77666666555
Q ss_pred hhhhcccCccccccCcccccccCCcEeccccCCccccCcc--cccccCCccEEEeCCCCccCCCcccc-cCCCcccEEcC
Q 039290 100 AVLAIRNNSFFGSLPEELSHLRGLKYFDFRFNNFHIEIPS--WFVSLPRLQHLLLKHNSFVGKIPETI-GYLSLLQELDL 176 (1049)
Q Consensus 100 ~~L~l~~n~~~g~~p~~~~~L~~L~~L~l~~n~~~~~~p~--~~~~l~~L~~L~L~~n~l~~~~p~~~-~~l~~L~~L~L 176 (1049)
+.++++.|.+. .+|+.++++++|++|||++|++.|.+|. .++++++|++|+|++|.+++.+|..+ +++++|++|||
T Consensus 80 ~~l~~~~~~~~-~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L 158 (768)
T 3rgz_A 80 ESLFLSNSHIN-GSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDL 158 (768)
T ss_dssp CEEECTTSCEE-ECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEEC
T ss_pred cccCCcCCCcC-CCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEEC
Confidence 55555555443 3446666666666666666666666666 66666666666666666666666554 56666666666
Q ss_pred CCccCccccCCCcccccccCCCCccceEEeeccccCCCCCCCcccccccceecccccccccccCCCCccccccceEEecc
Q 039290 177 SDNQLSGTIPSSIFNISSCQNLPVLEGLFISYNQLTGPIPTNLWKCRELHVVSLAFNKFQGGIPRDIGNLTSVRNLFLGN 256 (1049)
Q Consensus 177 s~N~l~g~ip~~~~~l~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 256 (1049)
++|++++.+|..+.. +.++++|++|++++|++++.+|. ..+++|++|+|++|++++.+|. ++++++|++|+|++
T Consensus 159 s~n~l~~~~~~~~~~---~~~l~~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~ 232 (768)
T 3rgz_A 159 SANSISGANVVGWVL---SDGCGELKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISG 232 (768)
T ss_dssp CSSCCEEETHHHHHH---TTCCTTCCEEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCS
T ss_pred CCCccCCcCChhhhh---hccCCCCCEEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcC
Confidence 666666555443110 11233455555555555544332 4445555555555555544444 55555555555555
Q ss_pred ccccccCccccccccceEEEeeccccCCCccccccccccccceEEeccCccCCCCCCcccCCCCCccEEEcCCCCCCCCC
Q 039290 257 NSLIGEIPNEIGNLRNLEVLGVQSSNLAGLIPASIFNISTLKELAVTDNDLLGSLPSSIDLGLPNLERLFLGENNFSGTI 336 (1049)
Q Consensus 257 N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~ 336 (1049)
|++++.+|..++++++|++|+|++|++.+.+|.. .+++|++|++++|++.+.+|..++..+++|++|+|++|++++.+
T Consensus 233 n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~ 310 (768)
T 3rgz_A 233 NKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAV 310 (768)
T ss_dssp SCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECC
T ss_pred CcCCCcccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCcc
Confidence 5555555555555555555555555555444433 44455555555555554555444433345555555555555445
Q ss_pred CccccCCCCCceeecccCccccCcccc-cccccccceeecccccccC-CCCCccc-------------------cccccc
Q 039290 337 PSSLTNISELSVLDFGFNSFSGLIPTT-FGNLRSLKLLSLAGNVLTS-PTPDLSF-------------------LSSLTS 395 (1049)
Q Consensus 337 p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~-~~~~~~~-------------------l~~l~~ 395 (1049)
|..|+++++|++|++++|++.+.+|.. |+++++|++|++++|.+++ ++..+.. ...+..
T Consensus 311 p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~ 390 (768)
T 3rgz_A 311 PPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQ 390 (768)
T ss_dssp CGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTC
T ss_pred chHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhh
Confidence 555555555555555555554444433 4444455555555544442 1211100 011222
Q ss_pred --CCCCcEEEccCCccccCCCCccccccccccEEEccCCccccCCCCCCCCCCCccEEEccCCcccccCCccccCcCCCc
Q 039290 396 --CRNLEIIYLSENPINGILPSSIGNFSISMKSLSMESCNISGGIPKELGNINNLTVIRLGNNELTGTIPVTLGRLQKLQ 473 (1049)
Q Consensus 396 --l~~L~~L~Ls~N~i~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 473 (1049)
+++|++|++++|.+++.+|..+..+. +|++|+|++|++++.+|..++++++|++|+|++|.+++.+|..+..+++|+
T Consensus 391 ~~~~~L~~L~L~~n~l~~~~p~~l~~l~-~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 469 (768)
T 3rgz_A 391 NPKNTLQELYLQNNGFTGKIPPTLSNCS-ELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLE 469 (768)
T ss_dssp STTCCCCEEECCSSEEEEECCGGGGGCT-TCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCC
T ss_pred cccCCccEEECCCCccccccCHHHhcCC-CCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCce
Confidence 56788888888888888888887775 888889998888888888888888999999999998888888888889999
Q ss_pred ceEeeccccCCCCCcccccccccceEEeeCcccCCcCchhccCcccCCceeecCcccccccCcccccccccccccccCCc
Q 039290 474 GLYLQNNKLEGSIPEDLCHLYRLANLYLGDNKLSGRLPACLGNLTSLRDLSLGSNALTSIIPSTLWNLKDILRFNLSSNS 553 (1049)
Q Consensus 474 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 553 (1049)
+|+|++|++++.+|..+..+++|++|++++|++++.+|..++++++|++|+|++|++++.+|..+..+++|+.|++++|+
T Consensus 470 ~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 549 (768)
T 3rgz_A 470 TLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNL 549 (768)
T ss_dssp EEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSE
T ss_pred EEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCc
Confidence 99999999988888888899999999999999988889889999999999999999998889999999999999999988
Q ss_pred cCCCCccC----------------------------------------------------------------------cC
Q 039290 554 LNGSLLPD----------------------------------------------------------------------IG 563 (1049)
Q Consensus 554 l~~~~~~~----------------------------------------------------------------------~~ 563 (1049)
+++.+|.. ++
T Consensus 550 l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~ 629 (768)
T 3rgz_A 550 FNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFD 629 (768)
T ss_dssp EESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCS
T ss_pred cCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhh
Confidence 88766643 44
Q ss_pred CCcceeEeecccccccccccccccCCCcccEEEeecccccCCccccccCccCCcEEeccCccccCCccccccccccccee
Q 039290 564 NLKVVIEMDLSLNALSGVIPVTIGGLQGLQLLSLRYNRLQGPIPESFGGLKSLNFVDMSNNNLSGTIPKSMEALSYLKHL 643 (1049)
Q Consensus 564 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l 643 (1049)
.+++|+.|||++|+++|.+|.+|+++++|+.|+|++|+++|.+|..|+++++|++|||++|+++|.+|..+..+++|++|
T Consensus 630 ~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L 709 (768)
T 3rgz_A 630 NNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEI 709 (768)
T ss_dssp SSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEE
T ss_pred ccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEE
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccCCcccccCCCCCCccccccccccCCccccCCCCccCCCCCCCC
Q 039290 644 NLSFNQLEGEIPTRGPFITFSAESFLGNQALCGSPKLQVSPCKTRS 689 (1049)
Q Consensus 644 ~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~cg~~~~~~~~c~~~~ 689 (1049)
|+++|+++|.+|..++|.++...+|.||+++||.|. ++|....
T Consensus 710 ~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l---~~C~~~~ 752 (768)
T 3rgz_A 710 DLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPL---PRCDPSN 752 (768)
T ss_dssp ECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTS---CCCCSCC
T ss_pred ECcCCcccccCCCchhhccCCHHHhcCCchhcCCCC---cCCCCCc
Confidence 999999999999999999999999999999999984 3786543
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=4.3e-72 Score=701.05 Aligned_cols=563 Identities=33% Similarity=0.465 Sum_probs=414.2
Q ss_pred EEEEEEeccccccccCC--CCCCcchhhhhhcccCccccccCccc-ccccCCcEeccccCCccccCccc---ccccCCcc
Q 039290 75 VTALNISYLGLTGTIPP--QLGNLSFLAVLAIRNNSFFGSLPEEL-SHLRGLKYFDFRFNNFHIEIPSW---FVSLPRLQ 148 (1049)
Q Consensus 75 v~~l~l~~~~l~g~~~~--~~~~l~~L~~L~l~~n~~~g~~p~~~-~~L~~L~~L~l~~n~~~~~~p~~---~~~l~~L~ 148 (1049)
++.|||+++.+.|.+|. .++++++|++|+|++|.+.|.+|..+ +++++|++|||++|++++.+|.. +.++++|+
T Consensus 102 L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~L~ 181 (768)
T 3rgz_A 102 LTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELK 181 (768)
T ss_dssp CCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEETHHHHHHTTCCTTCC
T ss_pred CCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCCcCChhhhhhccCCCCC
Confidence 34444444444444444 44444444444444444444444433 34444444444444444444433 34444444
Q ss_pred EEEeCCCCccCCCcccccCCCcccEEcCCCccCccccCCCcccccccCCCCccceEEeeccccCCCCCCCccccccccee
Q 039290 149 HLLLKHNSFVGKIPETIGYLSLLQELDLSDNQLSGTIPSSIFNISSCQNLPVLEGLFISYNQLTGPIPTNLWKCRELHVV 228 (1049)
Q Consensus 149 ~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L 228 (1049)
+|+|++|.+++.+|. +.+++|++|+|++|++++.+|. ++ ++++|++|++++|++++.+|..+..+++|++|
T Consensus 182 ~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~-l~------~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L 252 (768)
T 3rgz_A 182 HLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIPF-LG------DCSALQHLDISGNKLSGDFSRAISTCTELKLL 252 (768)
T ss_dssp EEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCCB-CT------TCCSCCEEECCSSCCCSCHHHHTTTCSSCCEE
T ss_pred EEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCcc-cc------cCCCCCEEECcCCcCCCcccHHHhcCCCCCEE
Confidence 444444444443332 4455555555555555544443 32 23446666666666666666666666666666
Q ss_pred cccccccccccCCCCccccccceEEeccccccccCccccccc-cceEEEeeccccCCCccccccccccccceEEeccCcc
Q 039290 229 SLAFNKFQGGIPRDIGNLTSVRNLFLGNNSLIGEIPNEIGNL-RNLEVLGVQSSNLAGLIPASIFNISTLKELAVTDNDL 307 (1049)
Q Consensus 229 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l-~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l 307 (1049)
+|++|+++|.+|.. .+++|++|+|++|++++.+|..+..+ ++|++|+|++|++.+.+|..+.++++|++|++++|++
T Consensus 253 ~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l 330 (768)
T 3rgz_A 253 NISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNF 330 (768)
T ss_dssp ECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEE
T ss_pred ECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcc
Confidence 66666666665554 56666666666666666777766664 7777777777777777777777777777777777777
Q ss_pred CCCCCCcccCCCCCccEEEcCCCCCCCCCCccccCCC-CCceeecccCccccCccccccc--ccccceeecccccccCCC
Q 039290 308 LGSLPSSIDLGLPNLERLFLGENNFSGTIPSSLTNIS-ELSVLDFGFNSFSGLIPTTFGN--LRSLKLLSLAGNVLTSPT 384 (1049)
Q Consensus 308 ~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~--l~~L~~L~L~~N~l~~~~ 384 (1049)
.|.+|...+..+++|++|++++|++++.+|..+.+++ +|++|++++|++++.+|..+.. +++|++|++++|.+++..
T Consensus 331 ~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~ 410 (768)
T 3rgz_A 331 SGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKI 410 (768)
T ss_dssp EEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEEC
T ss_pred cCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCcccccc
Confidence 7777766555677777777777777777777777766 7777777777777766666665 667777777777776543
Q ss_pred CCcccccccccCCCCcEEEccCCccccCCCCccccccccccEEEccCCccccCCCCCCCCCCCccEEEccCCcccccCCc
Q 039290 385 PDLSFLSSLTSCRNLEIIYLSENPINGILPSSIGNFSISMKSLSMESCNISGGIPKELGNINNLTVIRLGNNELTGTIPV 464 (1049)
Q Consensus 385 ~~~~~l~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 464 (1049)
+ ..+..+++|++|++++|++++..|..+..+. +|+.|++++|.+++.+|..+..+++|++|+|++|++++.+|.
T Consensus 411 p-----~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 484 (768)
T 3rgz_A 411 P-----PTLSNCSELVSLHLSFNYLSGTIPSSLGSLS-KLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPS 484 (768)
T ss_dssp C-----GGGGGCTTCCEEECCSSEEESCCCGGGGGCT-TCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCG
T ss_pred C-----HHHhcCCCCCEEECcCCcccCcccHHHhcCC-CCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCH
Confidence 3 2477888899999999999888888888776 899999999999988898898999999999999999988888
Q ss_pred cccCcCCCcceEeeccccCCCCCcccccccccceEEeeCcccCCcCchhccCcccCCceeecCcccccccCccc------
Q 039290 465 TLGRLQKLQGLYLQNNKLEGSIPEDLCHLYRLANLYLGDNKLSGRLPACLGNLTSLRDLSLGSNALTSIIPSTL------ 538 (1049)
Q Consensus 465 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~------ 538 (1049)
.++.+++|++|+|++|++++.+|.+++.+++|++|++++|++++.+|..++++++|++|++++|++++.+|..+
T Consensus 485 ~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~ 564 (768)
T 3rgz_A 485 GLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGK 564 (768)
T ss_dssp GGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTC
T ss_pred HHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccch
Confidence 89999999999999999988889999999999999999999988889899999999999999998887666543
Q ss_pred ----------------------------------------------------------------ccccccccccccCCcc
Q 039290 539 ----------------------------------------------------------------WNLKDILRFNLSSNSL 554 (1049)
Q Consensus 539 ----------------------------------------------------------------~~l~~L~~L~Ls~N~l 554 (1049)
..+++|+.|+|++|++
T Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l 644 (768)
T 3rgz_A 565 IAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNML 644 (768)
T ss_dssp BCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCC
T ss_pred hhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcc
Confidence 3457789999999999
Q ss_pred CCCCccCcCCCcceeEeecccccccccccccccCCCcccEEEeecccccCCccccccCccCCcEEeccCccccCCccccc
Q 039290 555 NGSLLPDIGNLKVVIEMDLSLNALSGVIPVTIGGLQGLQLLSLRYNRLQGPIPESFGGLKSLNFVDMSNNNLSGTIPKSM 634 (1049)
Q Consensus 555 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 634 (1049)
+|.+|..++.++.|+.|+|++|+++|.+|..|+++++|+.|+|++|+++|.+|..|+++++|++|||++|+++|.+|..
T Consensus 645 ~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~- 723 (768)
T 3rgz_A 645 SGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM- 723 (768)
T ss_dssp BSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSS-
T ss_pred cccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCc-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999964
Q ss_pred ccccccceeeccCCcccccCC
Q 039290 635 EALSYLKHLNLSFNQLEGEIP 655 (1049)
Q Consensus 635 ~~l~~L~~l~l~~N~l~~~~p 655 (1049)
..+.++....+.+|+.-|-.|
T Consensus 724 ~~~~~~~~~~~~gN~~Lcg~~ 744 (768)
T 3rgz_A 724 GQFETFPPAKFLNNPGLCGYP 744 (768)
T ss_dssp SSGGGSCGGGGCSCTEEESTT
T ss_pred hhhccCCHHHhcCCchhcCCC
Confidence 455666777788998555333
No 3
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=5.1e-64 Score=622.72 Aligned_cols=572 Identities=21% Similarity=0.226 Sum_probs=424.4
Q ss_pred CcEEEEEEeccccccccCCCCCCcchhhhhhcccCccccccCcccccccCCcEeccccCCccccCcccccccCCccEEEe
Q 039290 73 RRVTALNISYLGLTGTIPPQLGNLSFLAVLAIRNNSFFGSLPEELSHLRGLKYFDFRFNNFHIEIPSWFVSLPRLQHLLL 152 (1049)
Q Consensus 73 ~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~l~~n~~~g~~p~~~~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L 152 (1049)
.+++.|+|+++.+++..+..+++++.|++|+|++|.+++..|..++++++|++|+|++|++++..+..|+++++|++|+|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 35666777777666544455666777777777777766666666667777777777777666444445666777777777
Q ss_pred CCCCccCCCcccccCCCcccEEcCCCccCccccCCCcccccccCCCCccceEEeeccccCCCCCCCcc--cccccceecc
Q 039290 153 KHNSFVGKIPETIGYLSLLQELDLSDNQLSGTIPSSIFNISSCQNLPVLEGLFISYNQLTGPIPTNLW--KCRELHVVSL 230 (1049)
Q Consensus 153 ~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~l~~l~~L~~L~l~~N~l~~~~p~~l~--~l~~L~~L~L 230 (1049)
++|++++..|..|+.+++|++|||++|++++..|..+.+ +++|++|++++|++++..|..+. .+++|+.|++
T Consensus 105 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~------l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L 178 (680)
T 1ziw_A 105 MSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQ------LENLQELLLSNNKIQALKSEELDIFANSSLKKLEL 178 (680)
T ss_dssp CSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSC------CTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEEC
T ss_pred CCCccCccChhHccccCCCCEEECCCCcccccCchhhcc------cccCCEEEccCCcccccCHHHhhccccccccEEEC
Confidence 777766555566677777777777777766555554433 34466677777776655554433 3466777777
Q ss_pred cccccccccCCCCccccccceEEeccccccccCccccc---cccceEEEeeccccCCCccccccccccc--cceEEeccC
Q 039290 231 AFNKFQGGIPRDIGNLTSVRNLFLGNNSLIGEIPNEIG---NLRNLEVLGVQSSNLAGLIPASIFNIST--LKELAVTDN 305 (1049)
Q Consensus 231 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~---~l~~L~~L~L~~n~l~~~~p~~~~~l~~--L~~L~l~~N 305 (1049)
++|++++..|..++.+.+|+.|++++|.+.+.....+. ..++|+.|++++|++.+..|..+.+++. |++|++++|
T Consensus 179 ~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n 258 (680)
T 1ziw_A 179 SSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYN 258 (680)
T ss_dssp TTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTS
T ss_pred CCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCC
Confidence 77777666666666666777777766665533222221 2367888888888888888888887765 888888888
Q ss_pred ccCCCCCCcccCCCCCccEEEcCCCCCCCCCCccccCCCCCceeecccCcccc-----Ccc----cccccccccceeecc
Q 039290 306 DLLGSLPSSIDLGLPNLERLFLGENNFSGTIPSSLTNISELSVLDFGFNSFSG-----LIP----TTFGNLRSLKLLSLA 376 (1049)
Q Consensus 306 ~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-----~~p----~~~~~l~~L~~L~L~ 376 (1049)
++.+..|..+ ..+++|++|++++|++++..|..|..+++|++|++++|...+ .+| ..|..+++|++|+++
T Consensus 259 ~l~~~~~~~~-~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~ 337 (680)
T 1ziw_A 259 NLNVVGNDSF-AWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNME 337 (680)
T ss_dssp CCCEECTTTT-TTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECC
T ss_pred CcCccCcccc-cCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECC
Confidence 8876555544 468888888888888888888888888888888888776543 223 267788888888888
Q ss_pred cccccCCCCCcccccccccCCCCcEEEccCCccccC--CCCcccccc-ccccEEEccCCccccCCCCCCCCCCCccEEEc
Q 039290 377 GNVLTSPTPDLSFLSSLTSCRNLEIIYLSENPINGI--LPSSIGNFS-ISMKSLSMESCNISGGIPKELGNINNLTVIRL 453 (1049)
Q Consensus 377 ~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~i~~~--~p~~~~~~~-~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L 453 (1049)
+|.++++++. .+..+++|++|++++|.+... .+..+.... .+|+.|++++|++++..|..|..+++|++|+|
T Consensus 338 ~n~l~~~~~~-----~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 412 (680)
T 1ziw_A 338 DNDIPGIKSN-----MFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDL 412 (680)
T ss_dssp SCCBCCCCTT-----TTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccCCCChh-----HhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeC
Confidence 8888877654 367788888888888875422 222232222 37888888888888888888888888999999
Q ss_pred cCCcccccCC-ccccCcCCCcceEeeccccCCCCCcccccccccceEEeeCcccC--CcCchhccCcccCCceeecCccc
Q 039290 454 GNNELTGTIP-VTLGRLQKLQGLYLQNNKLEGSIPEDLCHLYRLANLYLGDNKLS--GRLPACLGNLTSLRDLSLGSNAL 530 (1049)
Q Consensus 454 s~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~L~~N~l 530 (1049)
++|.+++.+| ..|.++++|++|++++|++.+..+..|..+++|+.|++++|.+. +.+|..++++++|+.|++++|++
T Consensus 413 ~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l 492 (680)
T 1ziw_A 413 GLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNI 492 (680)
T ss_dssp CSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCC
T ss_pred CCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCC
Confidence 9888887665 67888888889999988888888888888888899999888876 56788888888899999999988
Q ss_pred ccccCcccccccccccccccCCccCCCCc--------cCcCCCcceeEeecccccccccccccccCCCcccEEEeecccc
Q 039290 531 TSIIPSTLWNLKDILRFNLSSNSLNGSLL--------PDIGNLKVVIEMDLSLNALSGVIPVTIGGLQGLQLLSLRYNRL 602 (1049)
Q Consensus 531 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~--------~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 602 (1049)
+++.|..+..+++|++|++++|++++..+ ..+..+++|++|+|++|+++.+.+..|.++++|+.|+|++|+|
T Consensus 493 ~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l 572 (680)
T 1ziw_A 493 ANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNL 572 (680)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCC
Confidence 88888888888888899999888876422 2367888888899999988866556788888899999999988
Q ss_pred cCCccccccCccCCcEEeccCccccCCcccccc-cccccceeeccCCcccccCCC
Q 039290 603 QGPIPESFGGLKSLNFVDMSNNNLSGTIPKSME-ALSYLKHLNLSFNQLEGEIPT 656 (1049)
Q Consensus 603 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~l~l~~N~l~~~~p~ 656 (1049)
++..+..|.++++|++|+|++|++++..|..+. .+++|+.+++++|+|.|.|+.
T Consensus 573 ~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 573 NTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp CCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred CcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCcc
Confidence 877777888888899999999988877777776 788888899999998888875
No 4
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=2.8e-63 Score=616.03 Aligned_cols=591 Identities=22% Similarity=0.250 Sum_probs=512.6
Q ss_pred EEEeccccccccCCCCCCcchhhhhhcccCccccccCcccccccCCcEeccccCCccccCcccccccCCccEEEeCCCCc
Q 039290 78 LNISYLGLTGTIPPQLGNLSFLAVLAIRNNSFFGSLPEELSHLRGLKYFDFRFNNFHIEIPSWFVSLPRLQHLLLKHNSF 157 (1049)
Q Consensus 78 l~l~~~~l~g~~~~~~~~l~~L~~L~l~~n~~~g~~p~~~~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~n~l 157 (1049)
++.++++++ .+|..+. +.+++|+|++|.+++..|..++++++|++|||++|++.+..|..|+++++|++|+|++|.+
T Consensus 9 ~~cs~~~L~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l 85 (680)
T 1ziw_A 9 ADCSHLKLT-QVPDDLP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNEL 85 (680)
T ss_dssp EECCSSCCS-SCCSCSC--TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCC
T ss_pred eECCCCCcc-ccccccC--CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCcc
Confidence 555666776 7888776 7899999999999987777899999999999999999999999999999999999999999
Q ss_pred cCCCcccccCCCcccEEcCCCccCccccCCCcccccccCCCCccceEEeeccccCCCCCCCcccccccceeccccccccc
Q 039290 158 VGKIPETIGYLSLLQELDLSDNQLSGTIPSSIFNISSCQNLPVLEGLFISYNQLTGPIPTNLWKCRELHVVSLAFNKFQG 237 (1049)
Q Consensus 158 ~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 237 (1049)
++..+..|+.+++|++|+|++|++++..|..+. ++++|++|++++|++++..|..+.++++|++|++++|++++
T Consensus 86 ~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~------~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 159 (680)
T 1ziw_A 86 SQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFV------KQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQA 159 (680)
T ss_dssp CCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTT------TCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCC
T ss_pred CccChhhhccCCCCCEEECCCCccCccChhHcc------ccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccc
Confidence 965555799999999999999999855555554 45679999999999999999999999999999999999998
Q ss_pred ccCCCCc--cccccceEEeccccccccCccccccccceEEEeeccccCCCccccccc---cccccceEEeccCccCCCCC
Q 039290 238 GIPRDIG--NLTSVRNLFLGNNSLIGEIPNEIGNLRNLEVLGVQSSNLAGLIPASIF---NISTLKELAVTDNDLLGSLP 312 (1049)
Q Consensus 238 ~~p~~~~--~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~---~l~~L~~L~l~~N~l~~~~p 312 (1049)
..|..++ .+++|++|+|++|++++..|..++.+.+|+.|++++|.+.......+. ..++|++|++++|++.+..|
T Consensus 160 ~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~ 239 (680)
T 1ziw_A 160 LKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSN 239 (680)
T ss_dssp BCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECT
T ss_pred cCHHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccCh
Confidence 8777665 558999999999999999999999999999999999988754333222 34789999999999998777
Q ss_pred CcccCCC--CCccEEEcCCCCCCCCCCccccCCCCCceeecccCccccCcccccccccccceeecccccccCCCC--Ccc
Q 039290 313 SSIDLGL--PNLERLFLGENNFSGTIPSSLTNISELSVLDFGFNSFSGLIPTTFGNLRSLKLLSLAGNVLTSPTP--DLS 388 (1049)
Q Consensus 313 ~~~~~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~--~~~ 388 (1049)
..+. .+ ++|++|+|++|++++..|..|+.+++|++|++++|++.+..|..|.++++|+.|++++|....... .+.
T Consensus 240 ~~~~-~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp 318 (680)
T 1ziw_A 240 TTFL-GLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLP 318 (680)
T ss_dssp TTTG-GGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CC
T ss_pred hHhh-ccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhccccccccc
Confidence 6654 44 459999999999998889999999999999999999999999999999999999999886542111 000
Q ss_pred cc--cccccCCCCcEEEccCCccccCCCCccccccccccEEEccCCcccc--CCCCCCCCC--CCccEEEccCCcccccC
Q 039290 389 FL--SSLTSCRNLEIIYLSENPINGILPSSIGNFSISMKSLSMESCNISG--GIPKELGNI--NNLTVIRLGNNELTGTI 462 (1049)
Q Consensus 389 ~l--~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~~~~~L~~L~L~~n~i~~--~~p~~~~~l--~~L~~L~Ls~N~l~~~~ 462 (1049)
.+ ..+..+++|++|++++|.+++..+..+..+. +|++|++++|.++. ..+..|..+ ++|+.|++++|++++..
T Consensus 319 ~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~ 397 (680)
T 1ziw_A 319 KIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLI-NLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIE 397 (680)
T ss_dssp EECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCT-TCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEEC
T ss_pred ccChhhcccCCCCCEEECCCCccCCCChhHhcccc-CCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEC
Confidence 00 1477899999999999999998888888776 99999999998543 223344443 58999999999999999
Q ss_pred CccccCcCCCcceEeeccccCCCCC-cccccccccceEEeeCcccCCcCchhccCcccCCceeecCcccc--cccCcccc
Q 039290 463 PVTLGRLQKLQGLYLQNNKLEGSIP-EDLCHLYRLANLYLGDNKLSGRLPACLGNLTSLRDLSLGSNALT--SIIPSTLW 539 (1049)
Q Consensus 463 p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~p~~~~ 539 (1049)
|..|..+++|++|+|++|++++.+| ..+..+++|++|++++|++.+..+..|..+++|+.|++++|.++ +.+|..+.
T Consensus 398 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~ 477 (680)
T 1ziw_A 398 SDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQ 477 (680)
T ss_dssp TTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTT
T ss_pred hhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccc
Confidence 9999999999999999999987666 68999999999999999999888999999999999999999997 56899999
Q ss_pred cccccccccccCCccCCCCccCcCCCcceeEeeccccccccccc--------ccccCCCcccEEEeecccccCCcccccc
Q 039290 540 NLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALSGVIP--------VTIGGLQGLQLLSLRYNRLQGPIPESFG 611 (1049)
Q Consensus 540 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p--------~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 611 (1049)
.+++|+.|++++|++++..+..+..+++|++|+|++|++++..+ ..|.++++|+.|+|++|+|+...+..|.
T Consensus 478 ~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~ 557 (680)
T 1ziw_A 478 PLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFK 557 (680)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTT
T ss_pred cCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcc
Confidence 99999999999999999888889999999999999999996532 2488999999999999999976667899
Q ss_pred CccCCcEEeccCccccCCcccccccccccceeeccCCcccccCCCC-C-CccccccccccCCccccCCCC
Q 039290 612 GLKSLNFVDMSNNNLSGTIPKSMEALSYLKHLNLSFNQLEGEIPTR-G-PFITFSAESFLGNQALCGSPK 679 (1049)
Q Consensus 612 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~-~-~~~~~~~~~~~~n~~~cg~~~ 679 (1049)
++++|++|||++|++++..+..|..+++|+.|++++|++++..|.. . .+..+....+.+||+.|+|+.
T Consensus 558 ~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 558 DLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred cccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCcc
Confidence 9999999999999999777777899999999999999999877642 1 355667788999999998873
No 5
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1.5e-59 Score=574.67 Aligned_cols=534 Identities=21% Similarity=0.234 Sum_probs=399.4
Q ss_pred EEEeccccccccCCCCCCcchhhhhhcccCccccccCcccccccCCcEeccccCCccccCcccccccCCccEEEeCCCCc
Q 039290 78 LNISYLGLTGTIPPQLGNLSFLAVLAIRNNSFFGSLPEELSHLRGLKYFDFRFNNFHIEIPSWFVSLPRLQHLLLKHNSF 157 (1049)
Q Consensus 78 l~l~~~~l~g~~~~~~~~l~~L~~L~l~~n~~~g~~p~~~~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~n~l 157 (1049)
++.++.+++ .+|..+.. .+++|+|++|.+++..|..++++++|++|||++|++.+..|..|+++++|++|+|++|.+
T Consensus 17 ~~c~~~~l~-~iP~~l~~--~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 93 (606)
T 3t6q_A 17 YNCENLGLN-EIPGTLPN--STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPL 93 (606)
T ss_dssp EECTTSCCS-SCCTTSCT--TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EECCCCCcc-cCcCCCCC--cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcc
Confidence 444556666 78877764 689999999999988788999999999999999999988899999999999999999999
Q ss_pred cCCCcccccCCCcccEEcCCCccCccccCCCcccccccCCCCccceEEeeccccCCCCCCCcccccccceeccccccccc
Q 039290 158 VGKIPETIGYLSLLQELDLSDNQLSGTIPSSIFNISSCQNLPVLEGLFISYNQLTGPIPTNLWKCRELHVVSLAFNKFQG 237 (1049)
Q Consensus 158 ~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 237 (1049)
++..|..|+.+++|++|+|++|++++..|..+. ++++|++|++++|++++..++.+..+++|++|++++|++++
T Consensus 94 ~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~------~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 167 (606)
T 3t6q_A 94 IFMAETALSGPKALKHLFFIQTGISSIDFIPLH------NQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHY 167 (606)
T ss_dssp SEECTTTTSSCTTCCEEECTTSCCSCGGGSCCT------TCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCE
T ss_pred cccChhhhcccccccEeeccccCcccCCcchhc------cCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccc
Confidence 988899999999999999999999954455554 45679999999999997444445558999999999999998
Q ss_pred ccCCCCccccccc--eEEeccccccccCccccccccceEEEeeccccCCCccccccccccccceEEeccCccCC----CC
Q 039290 238 GIPRDIGNLTSVR--NLFLGNNSLIGEIPNEIGNLRNLEVLGVQSSNLAGLIPASIFNISTLKELAVTDNDLLG----SL 311 (1049)
Q Consensus 238 ~~p~~~~~l~~L~--~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~----~~ 311 (1049)
..|..|+.+++|+ .|++++|++++..|..+.. .+|+.|++++|. .++..+..+..++...+.-+.+.. .+
T Consensus 168 ~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~-~~L~~L~l~~~~---~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i 243 (606)
T 3t6q_A 168 LSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDS-AVFQSLNFGGTQ---NLLVIFKGLKNSTIQSLWLGTFEDMDDEDI 243 (606)
T ss_dssp ECHHHHHTTTTCCSEEEECTTCCCCEECTTTTTT-CEEEEEECTTCS---CHHHHHHHTTTCEEEEEECCCCTTSCCCCC
T ss_pred cChhhhhhhcccceeEEecCCCccCccChhHhhh-ccccccccCCch---hHHHHhhhccccchhheechhhcccccccc
Confidence 8888888888888 8899999998777766655 689999998886 345555555555444443332221 12
Q ss_pred CCcccCCCC--CccEEEcCCCCCCCCCCccccCCCCCceeecccCccccCcccccccccccceeecccccccCCCCCccc
Q 039290 312 PSSIDLGLP--NLERLFLGENNFSGTIPSSLTNISELSVLDFGFNSFSGLIPTTFGNLRSLKLLSLAGNVLTSPTPDLSF 389 (1049)
Q Consensus 312 p~~~~~~l~--~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 389 (1049)
+...+.++. +|+.|++++|++++..+..|..+++|++|++++|+++ .+|..+..+++
T Consensus 244 ~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~-------------------- 302 (606)
T 3t6q_A 244 SPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLST-------------------- 302 (606)
T ss_dssp CGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTT--------------------
T ss_pred ChhHhchhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhccccc--------------------
Confidence 222221111 3445555555555444444555555555555555554 23444444444
Q ss_pred ccccccCCCCcEEEccCCccccCCCCccccccccccEEEccCCccccCCCC-CCCCCCCccEEEccCCcccccC--Cccc
Q 039290 390 LSSLTSCRNLEIIYLSENPINGILPSSIGNFSISMKSLSMESCNISGGIPK-ELGNINNLTVIRLGNNELTGTI--PVTL 466 (1049)
Q Consensus 390 l~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~--p~~~ 466 (1049)
|++|++++|.+.+..|..+..++ +|++|++++|.+.+.+|. .+..+++|++|++++|.+++.. |..+
T Consensus 303 ---------L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 372 (606)
T 3t6q_A 303 ---------LKKLVLSANKFENLCQISASNFP-SLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQL 372 (606)
T ss_dssp ---------CCEEECTTCCCSBGGGGCGGGCT-TCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTT
T ss_pred ---------CCEEECccCCcCcCchhhhhccC-cCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhc
Confidence 45555555554444444444443 555555555555544443 3677777777777777777655 6677
Q ss_pred cCcCCCcceEeeccccCCCCCcccccccccceEEeeCcccCCcCch-hccCcccCCceeecCcccccccCcccccccccc
Q 039290 467 GRLQKLQGLYLQNNKLEGSIPEDLCHLYRLANLYLGDNKLSGRLPA-CLGNLTSLRDLSLGSNALTSIIPSTLWNLKDIL 545 (1049)
Q Consensus 467 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 545 (1049)
..+++|++|++++|++.+..|..+..+++|++|++++|++++..|. .+.++++|++|++++|++++..|..+..+++|+
T Consensus 373 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 452 (606)
T 3t6q_A 373 RNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQ 452 (606)
T ss_dssp TTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCC
T ss_pred ccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCC
Confidence 7777777788877777777777777777888888888877766543 377788888888888888877777888888888
Q ss_pred cccccCCccCCC---CccCcCCCcceeEeecccccccccccccccCCCcccEEEeecccccCCccccccCccCCcEEecc
Q 039290 546 RFNLSSNSLNGS---LLPDIGNLKVVIEMDLSLNALSGVIPVTIGGLQGLQLLSLRYNRLQGPIPESFGGLKSLNFVDMS 622 (1049)
Q Consensus 546 ~L~Ls~N~l~~~---~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 622 (1049)
+|++++|++++. .+..+..+++|++|++++|++++..|..|+++++|+.|+|++|++++.+|..|.++++| +|+|+
T Consensus 453 ~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~ 531 (606)
T 3t6q_A 453 HLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLA 531 (606)
T ss_dssp EEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECC
T ss_pred EEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECc
Confidence 888888887762 23568888999999999999999889999999999999999999999999999999999 99999
Q ss_pred CccccCCcccccccccccceeeccCCcccccCCC
Q 039290 623 NNNLSGTIPKSMEALSYLKHLNLSFNQLEGEIPT 656 (1049)
Q Consensus 623 ~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~ 656 (1049)
+|++++.+|..+..+++|+.|++++|+|.|.++.
T Consensus 532 ~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 565 (606)
T 3t6q_A 532 SNHISIILPSLLPILSQQRTINLRQNPLDCTCSN 565 (606)
T ss_dssp SSCCCCCCGGGHHHHHTSSEEECTTCCEECSGGG
T ss_pred CCcccccCHhhcccCCCCCEEeCCCCCccccCCc
Confidence 9999988888899999999999999999998874
No 6
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=3.9e-58 Score=580.70 Aligned_cols=537 Identities=21% Similarity=0.221 Sum_probs=409.4
Q ss_pred EEEEeccccccccCCCCCCcchhhhhhcccCccccccCcccccccCCcEeccccCCccccC-cccccccCCccEEEeCCC
Q 039290 77 ALNISYLGLTGTIPPQLGNLSFLAVLAIRNNSFFGSLPEELSHLRGLKYFDFRFNNFHIEI-PSWFVSLPRLQHLLLKHN 155 (1049)
Q Consensus 77 ~l~l~~~~l~g~~~~~~~~l~~L~~L~l~~n~~~g~~p~~~~~L~~L~~L~l~~n~~~~~~-p~~~~~l~~L~~L~L~~n 155 (1049)
..|.++++++ .+|. -.+.|++|+|++|.+++..|..++++++|++|||++|+..+.+ |..|+++++|++|+|++|
T Consensus 8 ~~dcs~~~L~-~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N 83 (844)
T 3j0a_A 8 IAFYRFCNLT-QVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSS 83 (844)
T ss_dssp EEEESCCCSS-CCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTC
T ss_pred EEEccCCCCC-CCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCC
Confidence 3456677777 6776 4568889999999998888888999999999999998777777 778899999999999999
Q ss_pred CccCCCcccccCCCcccEEcCCCccCccccCCCcccccccCCCCccceEEeeccccCCCCC-CCcccccccceecccccc
Q 039290 156 SFVGKIPETIGYLSLLQELDLSDNQLSGTIPSSIFNISSCQNLPVLEGLFISYNQLTGPIP-TNLWKCRELHVVSLAFNK 234 (1049)
Q Consensus 156 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~l~~l~~L~~L~l~~N~l~~~~p-~~l~~l~~L~~L~L~~N~ 234 (1049)
.+++..|+.|+.+++|++|+|++|++++.+|... .+.++++|++|+|++|++++..| ..+.++++|++|+|++|+
T Consensus 84 ~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~----~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~ 159 (844)
T 3j0a_A 84 KIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDG----YFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQ 159 (844)
T ss_dssp CCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTC----CCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSC
T ss_pred cCcccCHhHccCCcccCEeeCcCCCCCcccccCc----cccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCc
Confidence 9988889999999999999999999987777651 12346678899999999887655 467888888888888888
Q ss_pred cccccCCCCccc--cccceEEeccccccccCccccccccc------eEEEeeccccCCCccccccccc---cccceEEec
Q 039290 235 FQGGIPRDIGNL--TSVRNLFLGNNSLIGEIPNEIGNLRN------LEVLGVQSSNLAGLIPASIFNI---STLKELAVT 303 (1049)
Q Consensus 235 l~~~~p~~~~~l--~~L~~L~L~~N~l~~~~p~~l~~l~~------L~~L~L~~n~l~~~~p~~~~~l---~~L~~L~l~ 303 (1049)
+++..|..++.+ ++|+.|+|++|.+.+..|..++.+.+ |+.|++++|.+.+.+|..+... ++++.|.++
T Consensus 160 i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~ 239 (844)
T 3j0a_A 160 IFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILA 239 (844)
T ss_dssp CCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECC
T ss_pred CCeeCHHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecc
Confidence 888888888877 78888888888888888877777665 8888888888777777666543 456666666
Q ss_pred cCccCCCCCCcccCCCCCccEEEcCCCCCCCCCCccccCC--CCCceeecccCccccCcccccccccccceeeccccccc
Q 039290 304 DNDLLGSLPSSIDLGLPNLERLFLGENNFSGTIPSSLTNI--SELSVLDFGFNSFSGLIPTTFGNLRSLKLLSLAGNVLT 381 (1049)
Q Consensus 304 ~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 381 (1049)
.+.... .++.|.+.+..+..|..+ ++|+.|++++|.+.+..|..|..+++|+.|+|++|.++
T Consensus 240 ~~~~~~----------------~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~ 303 (844)
T 3j0a_A 240 HHIMGA----------------GFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKIN 303 (844)
T ss_dssp SSCCBC----------------SSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCC
T ss_pred cccccc----------------cccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCC
Confidence 433221 011233333333333333 45666666666666555556666666666666666665
Q ss_pred CCCCCcccccccccCCCCcEEEccCCccccCCCCccccccccccEEEccCCccccCCCCCCCCCCCccEEEccCCccccc
Q 039290 382 SPTPDLSFLSSLTSCRNLEIIYLSENPINGILPSSIGNFSISMKSLSMESCNISGGIPKELGNINNLTVIRLGNNELTGT 461 (1049)
Q Consensus 382 ~~~~~~~~l~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 461 (1049)
.+.+. .|.++++|++|+|++|.+++..|..+..++ +|+.|++++|++.+..+..|..+++|++|+|++|.+++.
T Consensus 304 ~~~~~-----~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i 377 (844)
T 3j0a_A 304 KIADE-----AFYGLDNLQVLNLSYNLLGELYSSNFYGLP-KVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI 377 (844)
T ss_dssp EECTT-----TTTTCSSCCEEEEESCCCSCCCSCSCSSCT-TCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC
T ss_pred CCChH-----HhcCCCCCCEEECCCCCCCccCHHHhcCCC-CCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc
Confidence 54433 255556666666666666666566665554 677777777777766777788888899999999988742
Q ss_pred CCccccCcCCCcceEeeccccCCCCCcccccccccceEEeeCcccCCcC-chhccCcccCCceeecCcccccccCc-ccc
Q 039290 462 IPVTLGRLQKLQGLYLQNNKLEGSIPEDLCHLYRLANLYLGDNKLSGRL-PACLGNLTSLRDLSLGSNALTSIIPS-TLW 539 (1049)
Q Consensus 462 ~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~ 539 (1049)
+ .+++|+.|++++|+++ .+|.. ..+++.|++++|++++.. +..+.++++|+.|+|++|++++..+. .+.
T Consensus 378 -~----~~~~L~~L~l~~N~l~-~l~~~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 448 (844)
T 3j0a_A 378 -H----FIPSIPDIFLSGNKLV-TLPKI---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPS 448 (844)
T ss_dssp -S----SCCSCSEEEEESCCCC-CCCCC---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSC
T ss_pred -c----CCCCcchhccCCCCcc-ccccc---ccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccc
Confidence 2 3778889999999988 45543 457888999999988542 33466889999999999999876543 456
Q ss_pred cccccccccccCCccC-----CCCccCcCCCcceeEeecccccccccccccccCCCcccEEEeecccccCCccccccCcc
Q 039290 540 NLKDILRFNLSSNSLN-----GSLLPDIGNLKVVIEMDLSLNALSGVIPVTIGGLQGLQLLSLRYNRLQGPIPESFGGLK 614 (1049)
Q Consensus 540 ~l~~L~~L~Ls~N~l~-----~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 614 (1049)
.+++|+.|++++|.++ +..+..|..+++|++|+|++|+|++..|..|.++++|+.|+|++|+|++.+|..+. +
T Consensus 449 ~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~ 526 (844)
T 3j0a_A 449 ENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--A 526 (844)
T ss_dssp SCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--S
T ss_pred cCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--c
Confidence 6889999999999987 44456788999999999999999999999999999999999999999988887776 8
Q ss_pred CCcEEeccCccccCCcccccccccccceeeccCCcccccCCCC
Q 039290 615 SLNFVDMSNNNLSGTIPKSMEALSYLKHLNLSFNQLEGEIPTR 657 (1049)
Q Consensus 615 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~ 657 (1049)
+|++|||++|+|++.+|..+ .+|+.+++++|+|.|.|+..
T Consensus 527 ~L~~L~Ls~N~l~~~~~~~~---~~L~~l~l~~Np~~C~c~~~ 566 (844)
T 3j0a_A 527 NLEILDISRNQLLAPNPDVF---VSLSVLDITHNKFICECELS 566 (844)
T ss_dssp CCCEEEEEEECCCCCCSCCC---SSCCEEEEEEECCCCSSSCC
T ss_pred cccEEECCCCcCCCCChhHh---CCcCEEEecCCCcccccccH
Confidence 99999999999999888765 47899999999999999853
No 7
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=2e-60 Score=581.59 Aligned_cols=482 Identities=19% Similarity=0.317 Sum_probs=367.6
Q ss_pred hhhHHHHHHHHHhcccCCCCcc------cccCCCCCCCcee---eeEEEcCCCCcEEEEEEeccccccccCCCCCCcchh
Q 039290 29 TTDQFALLALKEHIKHDPSNLL------ANNWSTTSSVCSW---IGVTCGVRNRRVTALNISYLGLTGTIPPQLGNLSFL 99 (1049)
Q Consensus 29 ~~d~~all~~k~~~~~~~~~~l------~~~w~~~~~~c~w---~gv~c~~~~~~v~~l~l~~~~l~g~~~~~~~~l~~L 99 (1049)
..|++||.+||+++..+.+..- ..+|+.+++||.| .||+|+.. +||++|+|++++++|++|+++++|++|
T Consensus 29 ~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C~~~-~~V~~L~L~~~~l~g~lp~~l~~L~~L 107 (636)
T 4eco_A 29 IKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSLNSN-GRVTGLSLEGFGASGRVPDAIGQLTEL 107 (636)
T ss_dssp HHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGGGTTCCTTEEECTT-CCEEEEECTTSCCEEEECGGGGGCTTC
T ss_pred HHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcccccCCCCeEEcCC-CCEEEEEecCcccCCcCChHHhcCccc
Confidence 4699999999999865444321 1279999999999 99999865 899999999999999999999999999
Q ss_pred hhhhcccCcc------cc------ccCcccccccCCcEeccccCCccccCccccccc-CCccEEEeC-------------
Q 039290 100 AVLAIRNNSF------FG------SLPEELSHLRGLKYFDFRFNNFHIEIPSWFVSL-PRLQHLLLK------------- 153 (1049)
Q Consensus 100 ~~L~l~~n~~------~g------~~p~~~~~L~~L~~L~l~~n~~~~~~p~~~~~l-~~L~~L~L~------------- 153 (1049)
++|+|++|.+ .| .+|.+. +..|+ ++++.|.+.+.+|..+..+ ..+..+++.
T Consensus 108 ~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~ 184 (636)
T 4eco_A 108 EVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLK 184 (636)
T ss_dssp CEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCC
T ss_pred eEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchh
Confidence 9999999977 45 677766 67788 9999999999998887732 223333333
Q ss_pred -------CCCccCCCcccccCCCcccEEcCCCccCccc-----------------cCCCcc--cccccCCCCccceEEee
Q 039290 154 -------HNSFVGKIPETIGYLSLLQELDLSDNQLSGT-----------------IPSSIF--NISSCQNLPVLEGLFIS 207 (1049)
Q Consensus 154 -------~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~-----------------ip~~~~--~l~~l~~l~~L~~L~l~ 207 (1049)
.|+++| ||++|+++++|++|||++|+++|. +|++++ + +++|++|+|+
T Consensus 185 ~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~------l~~L~~L~L~ 257 (636)
T 4eco_A 185 DTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDN------LKDLTDVEVY 257 (636)
T ss_dssp TTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGG------CTTCCEEEEE
T ss_pred hhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcc------cCCCCEEEec
Confidence 688888 899999999999999999999986 888876 5 4558899999
Q ss_pred ccccCCCCCCCcccccccceecccccc-ccc-ccCCCCccc------cccceEEeccccccccCcc--ccccccceEEEe
Q 039290 208 YNQLTGPIPTNLWKCRELHVVSLAFNK-FQG-GIPRDIGNL------TSVRNLFLGNNSLIGEIPN--EIGNLRNLEVLG 277 (1049)
Q Consensus 208 ~N~l~~~~p~~l~~l~~L~~L~L~~N~-l~~-~~p~~~~~l------~~L~~L~L~~N~l~~~~p~--~l~~l~~L~~L~ 277 (1049)
+|++.|.+|..++++++|++|+|++|+ ++| .+|..++++ ++|++|+|++|+++ .+|. .++++++|+.|+
T Consensus 258 ~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~ 336 (636)
T 4eco_A 258 NCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLE 336 (636)
T ss_dssp CCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEE
T ss_pred CCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEe
Confidence 999999999999999999999999998 888 899888887 89999999999998 8888 899999999999
Q ss_pred eccccCCCccccccccccccceEEeccCccCCCCCCcccCCCCC-ccEEEcCCCCCCCCCCccccCCC--CCceeecccC
Q 039290 278 VQSSNLAGLIPASIFNISTLKELAVTDNDLLGSLPSSIDLGLPN-LERLFLGENNFSGTIPSSLTNIS--ELSVLDFGFN 354 (1049)
Q Consensus 278 L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~l~~-L~~L~L~~N~l~~~~p~~~~~l~--~L~~L~Ls~N 354 (1049)
+++|++.|.+| .+..+++|++|++++|++. .+|..+. .+++ |++|++++|+++ .+|..+..++ +|++|++++|
T Consensus 337 L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~-~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N 412 (636)
T 4eco_A 337 CLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFC-GFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYN 412 (636)
T ss_dssp CCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSE-EECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSS
T ss_pred CcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhh-hhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCC
Confidence 99999998888 8889999999999999988 7887755 6778 999999999998 7888887755 8999999999
Q ss_pred ccccCcccccc-------cccccceeecccccccCCCCCcccccccccCCCCcEEEccCCccccCCCCccccccc-----
Q 039290 355 SFSGLIPTTFG-------NLRSLKLLSLAGNVLTSPTPDLSFLSSLTSCRNLEIIYLSENPINGILPSSIGNFSI----- 422 (1049)
Q Consensus 355 ~l~~~~p~~~~-------~l~~L~~L~L~~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~~~~----- 422 (1049)
.+.+.+|..|. .+++|++|++++|.++.++... +..+++|++|+|++|+++ .+|..+.....
T Consensus 413 ~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~-----~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~ 486 (636)
T 4eco_A 413 EIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKEL-----FSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKN 486 (636)
T ss_dssp CTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHH-----HHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTT
T ss_pred cCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHH-----HccCCCCCEEECCCCCCC-CcCHHHhccccccccc
Confidence 99988888888 7788999999999888766542 556788888888888888 44544433221
Q ss_pred --cccEEEccCCccccCCCCCCC--CCCCccEEEccCCcccccCCccccCcCCCcceEeeccccCCCCCcccccccccce
Q 039290 423 --SMKSLSMESCNISGGIPKELG--NINNLTVIRLGNNELTGTIPVTLGRLQKLQGLYLQNNKLEGSIPEDLCHLYRLAN 498 (1049)
Q Consensus 423 --~L~~L~L~~n~i~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 498 (1049)
+|++|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+++|++|+|++|+
T Consensus 487 l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~----------------- 547 (636)
T 4eco_A 487 TYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQR----------------- 547 (636)
T ss_dssp GGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCB-----------------
T ss_pred cCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCc-----------------
Confidence 4555555555555 3444444 55555555555555554 45555555555555553221
Q ss_pred EEeeCcccCCcCchhccCcccCCceeecCcccccccCcccccccccccccccCCccC
Q 039290 499 LYLGDNKLSGRLPACLGNLTSLRDLSLGSNALTSIIPSTLWNLKDILRFNLSSNSLN 555 (1049)
Q Consensus 499 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 555 (1049)
++++|++.+.+|..++++++|++|+|++|+++ .+|..+. ++|+.|++++|++.
T Consensus 548 -~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~ 600 (636)
T 4eco_A 548 -DAQGNRTLREWPEGITLCPSLTQLQIGSNDIR-KVNEKIT--PNISVLDIKDNPNI 600 (636)
T ss_dssp -CTTCCBCCCCCCTTGGGCSSCCEEECCSSCCC-BCCSCCC--TTCCEEECCSCTTC
T ss_pred -ccccCcccccChHHHhcCCCCCEEECCCCcCC-ccCHhHh--CcCCEEECcCCCCc
Confidence 01345555555555555556666666666653 3444443 45666666666554
No 8
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=2.9e-58 Score=563.30 Aligned_cols=537 Identities=18% Similarity=0.176 Sum_probs=445.5
Q ss_pred EEEEeccccccccCCCCCCcchhhhhhcccCccccccCcccccccCCcEeccccCCccccCcccccccCCccEEEeCCCC
Q 039290 77 ALNISYLGLTGTIPPQLGNLSFLAVLAIRNNSFFGSLPEELSHLRGLKYFDFRFNNFHIEIPSWFVSLPRLQHLLLKHNS 156 (1049)
Q Consensus 77 ~l~l~~~~l~g~~~~~~~~l~~L~~L~l~~n~~~g~~p~~~~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~n~ 156 (1049)
.++.++++++ .+|..+. +.|++|+|++|.+++..|..++++++|++|||++|++++..|..|+++++|++|+|++|.
T Consensus 15 ~~~c~~~~l~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~ 91 (606)
T 3vq2_A 15 TYQCMDQKLS-KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNP 91 (606)
T ss_dssp EEECTTSCCS-SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred ceEccCCCcc-cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCc
Confidence 4667777887 8888776 789999999999998888899999999999999999998889999999999999999999
Q ss_pred ccCCCcccccCCCcccEEcCCCccCccccCCCcccccccCCCCccceEEeeccccCC-CCCCCcccccccceeccccccc
Q 039290 157 FVGKIPETIGYLSLLQELDLSDNQLSGTIPSSIFNISSCQNLPVLEGLFISYNQLTG-PIPTNLWKCRELHVVSLAFNKF 235 (1049)
Q Consensus 157 l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~l~~l~~L~~L~l~~N~l~~-~~p~~l~~l~~L~~L~L~~N~l 235 (1049)
+++..|..|+++++|++|+|++|++++..|..++ ++++|++|++++|++++ .+|..+.++++|++|++++|++
T Consensus 92 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~------~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l 165 (606)
T 3vq2_A 92 IQSFSPGSFSGLTSLENLVAVETKLASLESFPIG------QLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYI 165 (606)
T ss_dssp CCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCT------TCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCC
T ss_pred ccccChhhcCCcccCCEEEccCCccccccccccC------CCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcc
Confidence 9988899999999999999999999955556654 45679999999999986 6899999999999999999999
Q ss_pred ccccCCCCccccccc----eEEeccccccccCccccccccceEEEeeccccCC-CccccccccccccceEEeccCccCCC
Q 039290 236 QGGIPRDIGNLTSVR----NLFLGNNSLIGEIPNEIGNLRNLEVLGVQSSNLA-GLIPASIFNISTLKELAVTDNDLLGS 310 (1049)
Q Consensus 236 ~~~~p~~~~~l~~L~----~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~l~~N~l~~~ 310 (1049)
++..|..|+.+++|+ +|++++|.+++..+..+... +|+.|++++|.+. +.+|..+.++++|+.+++..+.+.+.
T Consensus 166 ~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~ 244 (606)
T 3vq2_A 166 QTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDE 244 (606)
T ss_dssp CEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTS
T ss_pred eecChhhhhhhhccccccceeeccCCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccC
Confidence 998899999888776 79999999996666666555 8999999999987 56778889999999998877665421
Q ss_pred CCCcccCCCCCccEEEcCCCCCCCCCCccccCCCCCceeec-ccCccccCcccccccccccceeecccccccCCCCCccc
Q 039290 311 LPSSIDLGLPNLERLFLGENNFSGTIPSSLTNISELSVLDF-GFNSFSGLIPTTFGNLRSLKLLSLAGNVLTSPTPDLSF 389 (1049)
Q Consensus 311 ~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L-s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 389 (1049)
. .+. .+.+..+..+..+ .++.+++ ..|.+.+.+|. +..+++|+.|++++|.++.++
T Consensus 245 ~---------~l~-------~~~~~~~~~l~~l-~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~l~----- 301 (606)
T 3vq2_A 245 R---------NLE-------IFEPSIMEGLCDV-TIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIKYLE----- 301 (606)
T ss_dssp C---------CCS-------CCCGGGGTTGGGS-EEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCCCCC-----
T ss_pred C---------ccc-------ccChHHhhhhhhc-cHhheeccccccccccccc-cccCCCCCEEEecCccchhhh-----
Confidence 1 111 0111122222222 3555555 55566665555 666666666666666665544
Q ss_pred ccccccCCCCcEEEccCCccccCCCCccccccccccEEEccCCccccCCCCCCCCCCCccEEEccCCccccc--CCcccc
Q 039290 390 LSSLTSCRNLEIIYLSENPINGILPSSIGNFSISMKSLSMESCNISGGIPKELGNINNLTVIRLGNNELTGT--IPVTLG 467 (1049)
Q Consensus 390 l~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~ 467 (1049)
.+..+++|+.|++++|.+ +.+|. + .+ .+|++|++++|...+.. .+..+++|++|++++|.+++. .|..+.
T Consensus 302 --~l~~~~~L~~L~l~~n~l-~~lp~-~-~l-~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~ 373 (606)
T 3vq2_A 302 --DVPKHFKWQSLSIIRCQL-KQFPT-L-DL-PFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDL 373 (606)
T ss_dssp --CCCTTCCCSEEEEESCCC-SSCCC-C-CC-SSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHH
T ss_pred --hccccccCCEEEcccccC-ccccc-C-CC-CccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhc
Confidence 245566667777777766 44552 3 33 36777777777544333 567889999999999999876 388899
Q ss_pred CcCCCcceEeeccccCCCCCcccccccccceEEeeCcccCCcCc-hhccCcccCCceeecCcccccccCccccccccccc
Q 039290 468 RLQKLQGLYLQNNKLEGSIPEDLCHLYRLANLYLGDNKLSGRLP-ACLGNLTSLRDLSLGSNALTSIIPSTLWNLKDILR 546 (1049)
Q Consensus 468 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 546 (1049)
.+++|++|++++|++++ +|..+..+++|+.|++++|++.+..| ..+.++++|++|++++|++++..|..+..+++|++
T Consensus 374 ~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 452 (606)
T 3vq2_A 374 GTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNT 452 (606)
T ss_dssp CCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCE
T ss_pred cCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCE
Confidence 99999999999999984 66889999999999999999998777 68999999999999999999999999999999999
Q ss_pred ccccCCccCC-CCccCcCCCcceeEeecccccccccccccccCCCcccEEEeecccccCCccccccCccCCcEEeccCcc
Q 039290 547 FNLSSNSLNG-SLLPDIGNLKVVIEMDLSLNALSGVIPVTIGGLQGLQLLSLRYNRLQGPIPESFGGLKSLNFVDMSNNN 625 (1049)
Q Consensus 547 L~Ls~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 625 (1049)
|++++|++++ .+|..++.+++|++|+|++|++++..|..|+++++|+.|+|++|++++.+|..|+++++|++|||++|+
T Consensus 453 L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~ 532 (606)
T 3vq2_A 453 LKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNR 532 (606)
T ss_dssp EECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSC
T ss_pred EECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCc
Confidence 9999999998 478889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCccccccccc-ccceeeccCCcccccCCC
Q 039290 626 LSGTIPKSMEALS-YLKHLNLSFNQLEGEIPT 656 (1049)
Q Consensus 626 l~~~~p~~~~~l~-~L~~l~l~~N~l~~~~p~ 656 (1049)
++ .+|..+..++ +|++|++++|+|.|.++.
T Consensus 533 l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 533 IE-TSKGILQHFPKSLAFFNLTNNSVACICEH 563 (606)
T ss_dssp CC-CEESCGGGSCTTCCEEECCSCCCCCSSTT
T ss_pred Cc-ccCHhHhhhcccCcEEEccCCCcccCCcc
Confidence 99 7888899997 599999999999999986
No 9
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=5.2e-58 Score=567.65 Aligned_cols=478 Identities=18% Similarity=0.259 Sum_probs=363.9
Q ss_pred CChhhHHHHHHHHHhcccCCCCcccccCCCCC-----CC--cee------------eeEEEcCCCCcEEEEEEecccccc
Q 039290 27 NVTTDQFALLALKEHIKHDPSNLLANNWSTTS-----SV--CSW------------IGVTCGVRNRRVTALNISYLGLTG 87 (1049)
Q Consensus 27 ~~~~d~~all~~k~~~~~~~~~~l~~~w~~~~-----~~--c~w------------~gv~c~~~~~~v~~l~l~~~~l~g 87 (1049)
+..+|++||++||+++. || +|+.+. +| |.| .||+|+. ++||+.|+|++++|+|
T Consensus 266 ~~~~d~~ALl~~k~~l~-~~------~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~L~G 337 (876)
T 4ecn_A 266 EYIKDYKALKAIWEALD-GK------NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFGAKG 337 (876)
T ss_dssp HHHHHHHHHHHHHHHTT-GG------GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTCCEE
T ss_pred cchHHHHHHHHHHHHcC-CC------CCCcCCCcccccCCccccccccccccccCcCceEecC-CCCEEEEECccCCCCC
Confidence 34679999999999994 55 565443 55 999 9999986 6899999999999999
Q ss_pred ccCCCCCCcchhhhhhc-ccCccccccCccc-------------------------------------------------
Q 039290 88 TIPPQLGNLSFLAVLAI-RNNSFFGSLPEEL------------------------------------------------- 117 (1049)
Q Consensus 88 ~~~~~~~~l~~L~~L~l-~~n~~~g~~p~~~------------------------------------------------- 117 (1049)
.+|+++++|++|++|+| ++|.+.|..|-..
T Consensus 338 ~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i 417 (876)
T 4ecn_A 338 RVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPI 417 (876)
T ss_dssp EECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCC
T ss_pred cCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcccccc
Confidence 99999999999999999 9999988755321
Q ss_pred --ccccCCcEecccc--CCccccCcccccccCCccEEEeCCCCccC-----------------CCccccc--CCCcccEE
Q 039290 118 --SHLRGLKYFDFRF--NNFHIEIPSWFVSLPRLQHLLLKHNSFVG-----------------KIPETIG--YLSLLQEL 174 (1049)
Q Consensus 118 --~~L~~L~~L~l~~--n~~~~~~p~~~~~l~~L~~L~L~~n~l~~-----------------~~p~~~~--~l~~L~~L 174 (1049)
.....++.+.+.. |++++ ||..|++|++|++|+|++|.++| .+|+.++ ++++|++|
T Consensus 418 ~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L 496 (876)
T 4ecn_A 418 KKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDV 496 (876)
T ss_dssp CCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEE
T ss_pred ccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEE
Confidence 1112344444443 88888 99999999999999999999998 3999988 99999999
Q ss_pred cCCCccCccccCCCcccccccCCCCccceEEeeccc-cCC-CCCCCccccc-------ccceecccccccccccCC--CC
Q 039290 175 DLSDNQLSGTIPSSIFNISSCQNLPVLEGLFISYNQ-LTG-PIPTNLWKCR-------ELHVVSLAFNKFQGGIPR--DI 243 (1049)
Q Consensus 175 ~Ls~N~l~g~ip~~~~~l~~l~~l~~L~~L~l~~N~-l~~-~~p~~l~~l~-------~L~~L~L~~N~l~~~~p~--~~ 243 (1049)
+|++|++.|.+|..+++ +++|++|+|++|+ ++| .+|..+..++ +|+.|+|++|+++ .+|. .|
T Consensus 497 ~Ls~N~l~~~iP~~l~~------L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l 569 (876)
T 4ecn_A 497 ELYNCPNMTQLPDFLYD------LPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASL 569 (876)
T ss_dssp EEESCTTCCSCCGGGGG------CSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHH
T ss_pred ECcCCCCCccChHHHhC------CCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhh
Confidence 99999999999988765 4569999999998 998 8998887776 9999999999999 8998 89
Q ss_pred ccccccceEEeccccccccCccccccccceEEEeeccccCCCccccccccccc-cceEEeccCccCCCCCCcccC-CCCC
Q 039290 244 GNLTSVRNLFLGNNSLIGEIPNEIGNLRNLEVLGVQSSNLAGLIPASIFNIST-LKELAVTDNDLLGSLPSSIDL-GLPN 321 (1049)
Q Consensus 244 ~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~-L~~L~l~~N~l~~~~p~~~~~-~l~~ 321 (1049)
+++++|+.|+|++|+++ .+| .|+++++|+.|+|++|++. .+|..+.++++ |++|++++|++. .+|..+.. ..++
T Consensus 570 ~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~ 645 (876)
T 4ecn_A 570 QKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYV 645 (876)
T ss_dssp TTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSC
T ss_pred hcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCC
Confidence 99999999999999999 888 9999999999999999999 78888999998 999999999998 78866542 2345
Q ss_pred ccEEEcCCCCCCCCCCccc---c--CCCCCceeecccCccccCcccccccccccceeecccccccCCCCCccccc--ccc
Q 039290 322 LERLFLGENNFSGTIPSSL---T--NISELSVLDFGFNSFSGLIPTTFGNLRSLKLLSLAGNVLTSPTPDLSFLS--SLT 394 (1049)
Q Consensus 322 L~~L~L~~N~l~~~~p~~~---~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~--~l~ 394 (1049)
|+.|+|++|++++.+|... . .+++|+.|+|++|++....+..+..+++|+.|+|++|.|+.++....... .+.
T Consensus 646 L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~l~ 725 (876)
T 4ecn_A 646 MGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYK 725 (876)
T ss_dssp EEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTTSCCT
T ss_pred CCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCCccChHHhcccccccc
Confidence 9999999999998766432 2 33478899999999885433445578888888888888887665431110 122
Q ss_pred cCCCCcEEEccCCccccCCCCccccccccccEEEccCCccccCCCCCCC--CCCCccEEEccCCcccccCCccccCcCCC
Q 039290 395 SCRNLEIIYLSENPINGILPSSIGNFSISMKSLSMESCNISGGIPKELG--NINNLTVIRLGNNELTGTIPVTLGRLQKL 472 (1049)
Q Consensus 395 ~l~~L~~L~Ls~N~i~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 472 (1049)
+|++|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+++|
T Consensus 726 nl~~L~~L~Ls~N~L~--------------------------~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L 778 (876)
T 4ecn_A 726 NTYLLTTIDLRFNKLT--------------------------SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQL 778 (876)
T ss_dssp TGGGCCEEECCSSCCC--------------------------CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTC
T ss_pred ccCCccEEECCCCCCc--------------------------cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCC
Confidence 3445666666666555 3444444 56666666666666664 56666666666
Q ss_pred cceEeec------cccCCCCCcccccccccceEEeeCcccCCcCchhccCcccCCceeecCcccccccCccccccccccc
Q 039290 473 QGLYLQN------NKLEGSIPEDLCHLYRLANLYLGDNKLSGRLPACLGNLTSLRDLSLGSNALTSIIPSTLWNLKDILR 546 (1049)
Q Consensus 473 ~~L~L~~------N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 546 (1049)
+.|+|++ |++.+.+|..+..+++|+.|+|++|++ +.+|..+. ++|+.|+|++|++..+.+..+.....+..
T Consensus 779 ~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~~~~ 855 (876)
T 4ecn_A 779 KAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDVTSVCPYIEAGM 855 (876)
T ss_dssp CEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEECGGGHHHHHTTC
T ss_pred CEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccChHHccccccchh
Confidence 6666655 666666666666666666666666666 45665544 46666666666666665555555555555
Q ss_pred ccccCCcc
Q 039290 547 FNLSSNSL 554 (1049)
Q Consensus 547 L~Ls~N~l 554 (1049)
+.|.+|++
T Consensus 856 ~~L~~n~~ 863 (876)
T 4ecn_A 856 YVLLYDKT 863 (876)
T ss_dssp CEEECCTT
T ss_pred eeecCCCc
Confidence 55555543
No 10
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=3.4e-56 Score=545.03 Aligned_cols=528 Identities=19% Similarity=0.189 Sum_probs=442.3
Q ss_pred eeeEEEcCC---------CCcEEEEEEeccccccccCCCCCCcchhhhhhcccCccccccCcccccccCCcEeccccCCc
Q 039290 63 WIGVTCGVR---------NRRVTALNISYLGLTGTIPPQLGNLSFLAVLAIRNNSFFGSLPEELSHLRGLKYFDFRFNNF 133 (1049)
Q Consensus 63 w~gv~c~~~---------~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~l~~n~~~g~~p~~~~~L~~L~~L~l~~n~~ 133 (1049)
+.-|.|... ...++.|+|+++.+++..|..++++++|++|+|++|.+.+..|..++++++|++|+|++|++
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 93 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPL 93 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcc
Confidence 455788642 24789999999999988888999999999999999999988899999999999999999999
Q ss_pred cccCcccccccCCccEEEeCCCCccCCCcccccCCCcccEEcCCCccCccccCCCcccccccCCCCccceEEeeccccCC
Q 039290 134 HIEIPSWFVSLPRLQHLLLKHNSFVGKIPETIGYLSLLQELDLSDNQLSGTIPSSIFNISSCQNLPVLEGLFISYNQLTG 213 (1049)
Q Consensus 134 ~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~l~~l~~L~~L~l~~N~l~~ 213 (1049)
.+..|..|+++++|++|+|++|.+++..|..++.+++|++|+|++|++++.-++.+. .+++|++|++++|++++
T Consensus 94 ~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~------~l~~L~~L~L~~n~l~~ 167 (606)
T 3t6q_A 94 IFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGF------PTEKLKVLDFQNNAIHY 167 (606)
T ss_dssp SEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTC------CCTTCCEEECCSSCCCE
T ss_pred cccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCccccc------CCcccCEEEcccCcccc
Confidence 999999999999999999999999977788999999999999999999963223332 25679999999999998
Q ss_pred CCCCCcccccccc--eecccccccccccCCCCccccccceEEeccccccccCccccccccceEEEeeccccCCC-----c
Q 039290 214 PIPTNLWKCRELH--VVSLAFNKFQGGIPRDIGNLTSVRNLFLGNNSLIGEIPNEIGNLRNLEVLGVQSSNLAG-----L 286 (1049)
Q Consensus 214 ~~p~~l~~l~~L~--~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~-----~ 286 (1049)
..|..+..+++|+ .|++++|++++..|..+.. .+|+.|++++|. .++..+..+.++....+..+.+.+ .
T Consensus 168 ~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~-~~L~~L~l~~~~---~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i 243 (606)
T 3t6q_A 168 LSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDS-AVFQSLNFGGTQ---NLLVIFKGLKNSTIQSLWLGTFEDMDDEDI 243 (606)
T ss_dssp ECHHHHHTTTTCCSEEEECTTCCCCEECTTTTTT-CEEEEEECTTCS---CHHHHHHHTTTCEEEEEECCCCTTSCCCCC
T ss_pred cChhhhhhhcccceeEEecCCCccCccChhHhhh-ccccccccCCch---hHHHHhhhccccchhheechhhcccccccc
Confidence 8888899999999 8999999999877777655 689999999997 456667777766655554433322 2
Q ss_pred ccccccccc--ccceEEeccCccCCCCCCcccCCCCCccEEEcCCCCCCCCCCccccCCCCCceeecccCccccCccccc
Q 039290 287 IPASIFNIS--TLKELAVTDNDLLGSLPSSIDLGLPNLERLFLGENNFSGTIPSSLTNISELSVLDFGFNSFSGLIPTTF 364 (1049)
Q Consensus 287 ~p~~~~~l~--~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 364 (1049)
.+..+..+. +|++|++++|.+.+ ++...+..+++|++|++++|+++ .+|..+..+++|++|++++|.+.+..|..+
T Consensus 244 ~~~~~~~l~~~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~ 321 (606)
T 3t6q_A 244 SPAVFEGLCEMSVESINLQKHYFFN-ISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISA 321 (606)
T ss_dssp CGGGGGGGGGSEEEEEECTTCCCSS-CCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCG
T ss_pred ChhHhchhhcCceeEEEeecCccCc-cCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhh
Confidence 233444444 79999999999984 55555668999999999999999 789999999999999999999999888899
Q ss_pred ccccccceeecccccccC-CCCCcccccccccCCCCcEEEccCCccccCCCCccccccccccEEEccCCccccCCCCCCC
Q 039290 365 GNLRSLKLLSLAGNVLTS-PTPDLSFLSSLTSCRNLEIIYLSENPINGILPSSIGNFSISMKSLSMESCNISGGIPKELG 443 (1049)
Q Consensus 365 ~~l~~L~~L~L~~N~l~~-~~~~~~~l~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~~~ 443 (1049)
..+++|++|++++|.+.. ++.. .+..+++|++|++++|.+++.. ..|..+.
T Consensus 322 ~~l~~L~~L~l~~n~~~~~~~~~-----~~~~l~~L~~L~l~~n~l~~~~-----------------------~~~~~~~ 373 (606)
T 3t6q_A 322 SNFPSLTHLSIKGNTKRLELGTG-----CLENLENLRELDLSHDDIETSD-----------------------CCNLQLR 373 (606)
T ss_dssp GGCTTCSEEECCSCSSCCBCCSS-----TTTTCTTCCEEECCSSCCCEEE-----------------------ESTTTTT
T ss_pred hccCcCCEEECCCCCcccccchh-----hhhccCcCCEEECCCCcccccc-----------------------Ccchhcc
Confidence 999999999999998773 3322 3566777777777777765432 1255677
Q ss_pred CCCCccEEEccCCcccccCCccccCcCCCcceEeeccccCCCCCc-ccccccccceEEeeCcccCCcCchhccCcccCCc
Q 039290 444 NINNLTVIRLGNNELTGTIPVTLGRLQKLQGLYLQNNKLEGSIPE-DLCHLYRLANLYLGDNKLSGRLPACLGNLTSLRD 522 (1049)
Q Consensus 444 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 522 (1049)
.+++|++|++++|.+++..|..|..+++|++|++++|++++..+. .+..+++|++|++++|.+++..|..++++++|++
T Consensus 374 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 453 (606)
T 3t6q_A 374 NLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQH 453 (606)
T ss_dssp TCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCE
T ss_pred cCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCE
Confidence 778888888888888877778888888888888888888766554 3778888888888888888777888888888888
Q ss_pred eeecCcccccc---cCcccccccccccccccCCccCCCCccCcCCCcceeEeecccccccccccccccCCCcccEEEeec
Q 039290 523 LSLGSNALTSI---IPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALSGVIPVTIGGLQGLQLLSLRY 599 (1049)
Q Consensus 523 L~L~~N~l~~~---~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 599 (1049)
|++++|++++. .+..+..+++|++|++++|++++..|..|..+++|++|+|++|++++..|..|.++++| .|+|++
T Consensus 454 L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~ 532 (606)
T 3t6q_A 454 LNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLAS 532 (606)
T ss_dssp EECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCS
T ss_pred EECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcC
Confidence 88888888763 33568888999999999999988888889999999999999999999999999999999 999999
Q ss_pred ccccCCccccccCccCCcEEeccCccccCCcc
Q 039290 600 NRLQGPIPESFGGLKSLNFVDMSNNNLSGTIP 631 (1049)
Q Consensus 600 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 631 (1049)
|++++.+|..|..+++|++|++++|++++..+
T Consensus 533 N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 533 NHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp SCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred CcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 99999999999999999999999999997655
No 11
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-55 Score=558.46 Aligned_cols=527 Identities=20% Similarity=0.213 Sum_probs=407.3
Q ss_pred ceeeeEEEcCCCCcEEEEEEeccccccccCCCCCCcchhhhhhcccCcccccc-CcccccccCCcEeccccCCccccCcc
Q 039290 61 CSWIGVTCGVRNRRVTALNISYLGLTGTIPPQLGNLSFLAVLAIRNNSFFGSL-PEELSHLRGLKYFDFRFNNFHIEIPS 139 (1049)
Q Consensus 61 c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~l~~n~~~g~~-p~~~~~L~~L~~L~l~~n~~~~~~p~ 139 (1049)
|.|.+|.+ ...+++.|||++|.+++..|..+++++.|++|+|++|...+.+ |..+++|++|++|+|++|++.+..|.
T Consensus 14 ~~L~~vP~--lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~ 91 (844)
T 3j0a_A 14 CNLTQVPQ--VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPD 91 (844)
T ss_dssp CCSSCCCS--SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTT
T ss_pred CCCCCCCC--CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHh
Confidence 57888887 4468999999999999888999999999999999999888888 77899999999999999999999999
Q ss_pred cccccCCccEEEeCCCCccCCCccc--ccCCCcccEEcCCCccCccccCC-CcccccccCCCCccceEEeeccccCCCCC
Q 039290 140 WFVSLPRLQHLLLKHNSFVGKIPET--IGYLSLLQELDLSDNQLSGTIPS-SIFNISSCQNLPVLEGLFISYNQLTGPIP 216 (1049)
Q Consensus 140 ~~~~l~~L~~L~L~~n~l~~~~p~~--~~~l~~L~~L~Ls~N~l~g~ip~-~~~~l~~l~~l~~L~~L~l~~N~l~~~~p 216 (1049)
.|+++++|++|+|++|.+++.+|.. ++++++|++|||++|++++..|. .+. ++++|++|+|++|++++..|
T Consensus 92 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~------~L~~L~~L~Ls~N~i~~~~~ 165 (844)
T 3j0a_A 92 AFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFG------KLNSLKSIDFSSNQIFLVCE 165 (844)
T ss_dssp SSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGG------TCSSCCEEEEESSCCCCCCS
T ss_pred HccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHh------hCCCCCEEECCCCcCCeeCH
Confidence 9999999999999999999878776 99999999999999999976553 443 46679999999999999999
Q ss_pred CCcccc--cccceecccccccccccCCCCccccc------cceEEeccccccccCccccccc---cceEEEeeccccCCC
Q 039290 217 TNLWKC--RELHVVSLAFNKFQGGIPRDIGNLTS------VRNLFLGNNSLIGEIPNEIGNL---RNLEVLGVQSSNLAG 285 (1049)
Q Consensus 217 ~~l~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~------L~~L~L~~N~l~~~~p~~l~~l---~~L~~L~L~~n~l~~ 285 (1049)
..+..+ ++|+.|+|+.|.+++..|..++.+.+ |+.|+|++|.+++.+|..+... .+++.|.++.+....
T Consensus 166 ~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~ 245 (844)
T 3j0a_A 166 HELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGA 245 (844)
T ss_dssp GGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBC
T ss_pred HHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccc
Confidence 999988 89999999999999999998887776 9999999999999998887764 567888877443321
Q ss_pred ccccccccccccceEEeccCccCCCCCCcccCC--CCCccEEEcCCCCCCCCCCccccCCCCCceeecccCccccCcccc
Q 039290 286 LIPASIFNISTLKELAVTDNDLLGSLPSSIDLG--LPNLERLFLGENNFSGTIPSSLTNISELSVLDFGFNSFSGLIPTT 363 (1049)
Q Consensus 286 ~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~--l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 363 (1049)
. ...+++.+.. ...+.+ .++|+.|+|++|.+++..|..|..+++|+.|+|++|++.+..|..
T Consensus 246 ~---------------~~~~~l~~~~-~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~ 309 (844)
T 3j0a_A 246 G---------------FGFHNIKDPD-QNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEA 309 (844)
T ss_dssp S---------------SSCSSSTTGG-GTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTT
T ss_pred c---------------ccccccCCCC-hhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHH
Confidence 1 1111111111 111111 245666666666666555666666666666666666666666666
Q ss_pred cccccccceeecccccccCCCCCcccccccccCCCCcEEEccCCccccCCCCccccccccccEEEccCCccccCCCCCCC
Q 039290 364 FGNLRSLKLLSLAGNVLTSPTPDLSFLSSLTSCRNLEIIYLSENPINGILPSSIGNFSISMKSLSMESCNISGGIPKELG 443 (1049)
Q Consensus 364 ~~~l~~L~~L~L~~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~~~ 443 (1049)
|..+++|++|+|++|.++.+.+. .+..+++|+.|++++|.+.++.+..+..+. +|+.|+|++|.+++ +.
T Consensus 310 ~~~l~~L~~L~Ls~N~l~~~~~~-----~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~-~L~~L~Ls~N~l~~-----i~ 378 (844)
T 3j0a_A 310 FYGLDNLQVLNLSYNLLGELYSS-----NFYGLPKVAYIDLQKNHIAIIQDQTFKFLE-KLQTLDLRDNALTT-----IH 378 (844)
T ss_dssp TTTCSSCCEEEEESCCCSCCCSC-----SCSSCTTCCEEECCSCCCCCCCSSCSCSCC-CCCEEEEETCCSCC-----CS
T ss_pred hcCCCCCCEEECCCCCCCccCHH-----HhcCCCCCCEEECCCCCCCccChhhhcCCC-CCCEEECCCCCCCc-----cc
Confidence 66666666666666666555432 255566666666666666655555555443 66666666666653 22
Q ss_pred CCCCccEEEccCCcccccCCccccCcCCCcceEeeccccCCCC-CcccccccccceEEeeCcccCCcCch-hccCcccCC
Q 039290 444 NINNLTVIRLGNNELTGTIPVTLGRLQKLQGLYLQNNKLEGSI-PEDLCHLYRLANLYLGDNKLSGRLPA-CLGNLTSLR 521 (1049)
Q Consensus 444 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~ 521 (1049)
.+++|+.|++++|+++ .+|.. ..+++.|++++|++++.. +..+..+++|+.|+|++|++++..+. .+..+++|+
T Consensus 379 ~~~~L~~L~l~~N~l~-~l~~~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~ 454 (844)
T 3j0a_A 379 FIPSIPDIFLSGNKLV-TLPKI---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLE 454 (844)
T ss_dssp SCCSCSEEEEESCCCC-CCCCC---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCC
T ss_pred CCCCcchhccCCCCcc-ccccc---ccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccc
Confidence 3677888888888887 44443 456788888888887532 22355778888888888888754432 355678888
Q ss_pred ceeecCcccc-----cccCcccccccccccccccCCccCCCCccCcCCCcceeEeecccccccccccccccCCCcccEEE
Q 039290 522 DLSLGSNALT-----SIIPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALSGVIPVTIGGLQGLQLLS 596 (1049)
Q Consensus 522 ~L~L~~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 596 (1049)
.|+|++|.++ +..+..|..+++|+.|+|++|++++..+..|..+++|++|+|++|+|++..|..+. ++|+.|+
T Consensus 455 ~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~ 532 (844)
T 3j0a_A 455 QLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILD 532 (844)
T ss_dssp BCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEE
T ss_pred cccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEE
Confidence 9999998887 44556788899999999999999998888899999999999999999988777776 8999999
Q ss_pred eecccccCCccccccCccCCcEEeccCccccCCcc
Q 039290 597 LRYNRLQGPIPESFGGLKSLNFVDMSNNNLSGTIP 631 (1049)
Q Consensus 597 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 631 (1049)
|++|+|++.+|..|. +|+.|++++|++.+.-+
T Consensus 533 Ls~N~l~~~~~~~~~---~L~~l~l~~Np~~C~c~ 564 (844)
T 3j0a_A 533 ISRNQLLAPNPDVFV---SLSVLDITHNKFICECE 564 (844)
T ss_dssp EEEECCCCCCSCCCS---SCCEEEEEEECCCCSSS
T ss_pred CCCCcCCCCChhHhC---CcCEEEecCCCcccccc
Confidence 999999999998764 78999999999987544
No 12
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=2.9e-55 Score=536.76 Aligned_cols=529 Identities=20% Similarity=0.209 Sum_probs=392.7
Q ss_pred hhhhcccCccccccCcccccccCCcEeccccCCccccCcccccccCCccEEEeCCCCccCCCcccccCCCcccEEcCCCc
Q 039290 100 AVLAIRNNSFFGSLPEELSHLRGLKYFDFRFNNFHIEIPSWFVSLPRLQHLLLKHNSFVGKIPETIGYLSLLQELDLSDN 179 (1049)
Q Consensus 100 ~~L~l~~n~~~g~~p~~~~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N 179 (1049)
.+++.++++++ .+|..+. ++|++|||++|++++..|..|.++++|++|+|++|.+++..|..|+++++|++|+|++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n 90 (606)
T 3vq2_A 14 ITYQCMDQKLS-KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGN 90 (606)
T ss_dssp TEEECTTSCCS-SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTC
T ss_pred CceEccCCCcc-cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCC
Confidence 35667777776 6776554 56777777777777666667777777777777777777666667777777777777777
Q ss_pred cCccccCCCcccccccCCCCccceEEeeccccCCCCCCCcccccccceeccccccccc-ccCCCCccccccceEEecccc
Q 039290 180 QLSGTIPSSIFNISSCQNLPVLEGLFISYNQLTGPIPTNLWKCRELHVVSLAFNKFQG-GIPRDIGNLTSVRNLFLGNNS 258 (1049)
Q Consensus 180 ~l~g~ip~~~~~l~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~ 258 (1049)
++++..|..+.+ +++|++|++++|++++..|..+.++++|++|+|++|++++ .+|..|+++++|++|+|++|+
T Consensus 91 ~l~~~~p~~~~~------l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~ 164 (606)
T 3vq2_A 91 PIQSFSPGSFSG------LTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNY 164 (606)
T ss_dssp CCCCCCTTSSTT------CTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSC
T ss_pred cccccChhhcCC------cccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCc
Confidence 777555655543 3446666666666665544555556666666666665554 345555555555555555555
Q ss_pred ccccCccccccccceE----EEeeccccCCCccccccccccccceEEeccCccCCCCCCcccCCCCCccEEEcCCCCCC-
Q 039290 259 LIGEIPNEIGNLRNLE----VLGVQSSNLAGLIPASIFNISTLKELAVTDNDLLGSLPSSIDLGLPNLERLFLGENNFS- 333 (1049)
Q Consensus 259 l~~~~p~~l~~l~~L~----~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~- 333 (1049)
+++..|..|+.+++|+ .|++++|++.+..+..+.. .+|++|++++|.++
T Consensus 165 l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~--------------------------~~L~~L~L~~n~~~~ 218 (606)
T 3vq2_A 165 IQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQG--------------------------IKLHELTLRGNFNSS 218 (606)
T ss_dssp CCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTT--------------------------CEEEEEEEESCCSCH
T ss_pred ceecChhhhhhhhccccccceeeccCCCcceeCcccccC--------------------------ceeeeeeccCCccch
Confidence 5555555555554443 4555555544333322222 24555555555554
Q ss_pred CCCCccccCCCCCceeecccCcccc------Cccccccccc--ccceeec-ccccccCCCCCcccccccccCCCCcEEEc
Q 039290 334 GTIPSSLTNISELSVLDFGFNSFSG------LIPTTFGNLR--SLKLLSL-AGNVLTSPTPDLSFLSSLTSCRNLEIIYL 404 (1049)
Q Consensus 334 ~~~p~~~~~l~~L~~L~Ls~N~l~~------~~p~~~~~l~--~L~~L~L-~~N~l~~~~~~~~~l~~l~~l~~L~~L~L 404 (1049)
+..|..+.++++|+.+++..+.+.+ ..+..+..+. +++.+++ ..|.+.+..+ .+..+++|+.|++
T Consensus 219 ~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~------~~~~l~~L~~L~l 292 (606)
T 3vq2_A 219 NIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIV------KFHCLANVSAMSL 292 (606)
T ss_dssp HHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGG------SCGGGTTCSEEEE
T ss_pred hHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheecccccccccccc------ccccCCCCCEEEe
Confidence 2345555556666665554443332 1122222222 4566666 5555555333 2778899999999
Q ss_pred cCCccccCCCCccccccccccEEEccCCccccCCCCCCCCCCCccEEEccCCcccccCCccccCcCCCcceEeeccccCC
Q 039290 405 SENPINGILPSSIGNFSISMKSLSMESCNISGGIPKELGNINNLTVIRLGNNELTGTIPVTLGRLQKLQGLYLQNNKLEG 484 (1049)
Q Consensus 405 s~N~i~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 484 (1049)
++|.+... | .+..+. +|++|++++|.+ +.+| .+ .+++|+.|++++|...+.. .+..+++|++|++++|++++
T Consensus 293 ~~~~~~~l-~-~l~~~~-~L~~L~l~~n~l-~~lp-~~-~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~ 364 (606)
T 3vq2_A 293 AGVSIKYL-E-DVPKHF-KWQSLSIIRCQL-KQFP-TL-DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSF 364 (606)
T ss_dssp ESCCCCCC-C-CCCTTC-CCSEEEEESCCC-SSCC-CC-CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEE
T ss_pred cCccchhh-h-hccccc-cCCEEEcccccC-cccc-cC-CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCC
Confidence 99999754 4 565554 899999999999 6788 45 9999999999999665443 67899999999999999986
Q ss_pred C--CCcccccccccceEEeeCcccCCcCchhccCcccCCceeecCcccccccC-cccccccccccccccCCccCCCCccC
Q 039290 485 S--IPEDLCHLYRLANLYLGDNKLSGRLPACLGNLTSLRDLSLGSNALTSIIP-STLWNLKDILRFNLSSNSLNGSLLPD 561 (1049)
Q Consensus 485 ~--~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~~~~ 561 (1049)
. +|..+..+++|++|++++|.++ .+|..+.++++|+.|++++|++++..| ..+..+++|++|++++|.+++..|..
T Consensus 365 ~~~~~~~~~~~~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 443 (606)
T 3vq2_A 365 SGCCSYSDLGTNSLRHLDLSFNGAI-IMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGI 443 (606)
T ss_dssp EEECCHHHHCCSCCCEEECCSCSEE-EECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTT
T ss_pred CcchhhhhccCCcccEeECCCCccc-cchhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhh
Confidence 6 4888999999999999999998 477899999999999999999999888 78999999999999999999999999
Q ss_pred cCCCcceeEeecccccccc-cccccccCCCcccEEEeecccccCCccccccCccCCcEEeccCccccCCccccccccccc
Q 039290 562 IGNLKVVIEMDLSLNALSG-VIPVTIGGLQGLQLLSLRYNRLQGPIPESFGGLKSLNFVDMSNNNLSGTIPKSMEALSYL 640 (1049)
Q Consensus 562 ~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 640 (1049)
+..+++|++|++++|++++ .+|..|+.+++|+.|+|++|++++.+|..|+++++|++|+|++|++++.+|..+..+++|
T Consensus 444 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 523 (606)
T 3vq2_A 444 FLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSL 523 (606)
T ss_dssp TTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTC
T ss_pred hcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcC
Confidence 9999999999999999998 579999999999999999999999999999999999999999999999889999999999
Q ss_pred ceeeccCCcccccCCCC-CCcc-ccccccccCCccccCCCC
Q 039290 641 KHLNLSFNQLEGEIPTR-GPFI-TFSAESFLGNQALCGSPK 679 (1049)
Q Consensus 641 ~~l~l~~N~l~~~~p~~-~~~~-~~~~~~~~~n~~~cg~~~ 679 (1049)
++|++++|+++. +|.. ..+. .+....+.+|++.|+++.
T Consensus 524 ~~L~l~~N~l~~-~p~~~~~l~~~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 524 STLDCSFNRIET-SKGILQHFPKSLAFFNLTNNSVACICEH 563 (606)
T ss_dssp CEEECTTSCCCC-EESCGGGSCTTCCEEECCSCCCCCSSTT
T ss_pred CEEECCCCcCcc-cCHhHhhhcccCcEEEccCCCcccCCcc
Confidence 999999999994 5543 2332 355678999999998874
No 13
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.2e-52 Score=507.69 Aligned_cols=534 Identities=18% Similarity=0.192 Sum_probs=385.7
Q ss_pred EEEeccccccccCCCCCCcchhhhhhcccCccccccCcccccccCCcEeccccCCccccCcccccccCCccEEEeCCCCc
Q 039290 78 LNISYLGLTGTIPPQLGNLSFLAVLAIRNNSFFGSLPEELSHLRGLKYFDFRFNNFHIEIPSWFVSLPRLQHLLLKHNSF 157 (1049)
Q Consensus 78 l~l~~~~l~g~~~~~~~~l~~L~~L~l~~n~~~g~~p~~~~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~n~l 157 (1049)
++.++.+++ .+|..+. +.+++|+|++|++++..|..++++++|++|||++|++++..|..|+++++|++|+|++|.+
T Consensus 12 ~~c~~~~l~-~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 88 (570)
T 2z63_A 12 YQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 88 (570)
T ss_dssp EECCSSCCS-SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EEeCCCCcc-ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcC
Confidence 444555666 6777654 4688999999999877777889999999999999999887788899999999999999999
Q ss_pred cCCCcccccCCCcccEEcCCCccCccccCC-CcccccccCCCCccceEEeeccccCC-CCCCCcccccccceeccccccc
Q 039290 158 VGKIPETIGYLSLLQELDLSDNQLSGTIPS-SIFNISSCQNLPVLEGLFISYNQLTG-PIPTNLWKCRELHVVSLAFNKF 235 (1049)
Q Consensus 158 ~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~-~~~~l~~l~~l~~L~~L~l~~N~l~~-~~p~~l~~l~~L~~L~L~~N~l 235 (1049)
++..|..|+.+++|++|+|++|+++ .+|. .++ ++++|++|++++|++++ .+|..+.++++|+.|++++|++
T Consensus 89 ~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~------~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l 161 (570)
T 2z63_A 89 QSLALGAFSGLSSLQKLVAVETNLA-SLENFPIG------HLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 161 (570)
T ss_dssp CEECTTTTTTCTTCCEEECTTSCCC-CSTTCSCT------TCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCC
T ss_pred CccCHhhhcCccccccccccccccc-cCCCcccc------ccccccEEecCCCccceecChhhhcccCCCCEEeCcCCcc
Confidence 8777788999999999999999998 4443 343 45668899999999887 5788888888999999999988
Q ss_pred ccccCCCCcccccc----ceEEeccccccccCccccccccceEEEeeccccCCC-ccccccccccccceEEeccCccCCC
Q 039290 236 QGGIPRDIGNLTSV----RNLFLGNNSLIGEIPNEIGNLRNLEVLGVQSSNLAG-LIPASIFNISTLKELAVTDNDLLGS 310 (1049)
Q Consensus 236 ~~~~p~~~~~l~~L----~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~ 310 (1049)
++..|..++.+++| +.|++++|.+++..|..+..+ +|+.|++++|.... .+|..+..++.++.+.+..+.+..
T Consensus 162 ~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~- 239 (570)
T 2z63_A 162 QSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRN- 239 (570)
T ss_dssp CEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCC-
T ss_pred ceecHHHccchhccchhhhhcccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccC-
Confidence 88778888888888 788888888887777777766 78888888774432 355666677777766665443321
Q ss_pred CCCcccCCCCCccEEEcCCCCCCCCCCccccCCCCCceeecccC-ccccCcccccccccccceeecccccccCCCCCccc
Q 039290 311 LPSSIDLGLPNLERLFLGENNFSGTIPSSLTNISELSVLDFGFN-SFSGLIPTTFGNLRSLKLLSLAGNVLTSPTPDLSF 389 (1049)
Q Consensus 311 ~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 389 (1049)
..+++ .+....+. .+..+ .++.+++++| .+.+..|..|..+++|+.|++++|.++.++..
T Consensus 240 --------~~~l~--~~~~~~~~-----~l~~l-~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~l~~~--- 300 (570)
T 2z63_A 240 --------EGNLE--KFDKSALE-----GLCNL-TIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKDF--- 300 (570)
T ss_dssp --------CSSCE--ECCTTTTG-----GGGGS-EEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEECSCCBC---
T ss_pred --------chhhh--hcchhhhc-----ccccc-chhhhhhhcchhhhhhchhhhcCcCcccEEEecCccchhhhhh---
Confidence 11111 11111111 12222 3556666666 56666666677777777777777766654432
Q ss_pred ccccccCCCCcEEEccCCccccCCCCccccccccccEEEccCCccccCCCCCCCCCCCccEEEccCCcccccCCccccCc
Q 039290 390 LSSLTSCRNLEIIYLSENPINGILPSSIGNFSISMKSLSMESCNISGGIPKELGNINNLTVIRLGNNELTGTIPVTLGRL 469 (1049)
Q Consensus 390 l~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 469 (1049)
+..+ +|+.|++++|.+. .+|. ..+++|+.|++++|.+.+..+. ..+
T Consensus 301 ---~~~~-~L~~L~l~~n~~~--------------------------~l~~--~~l~~L~~L~l~~n~~~~~~~~--~~~ 346 (570)
T 2z63_A 301 ---SYNF-GWQHLELVNCKFG--------------------------QFPT--LKLKSLKRLTFTSNKGGNAFSE--VDL 346 (570)
T ss_dssp ---CSCC-CCSEEEEESCBCS--------------------------SCCB--CBCSSCCEEEEESCBSCCBCCC--CBC
T ss_pred ---hccC-CccEEeeccCccc--------------------------ccCc--ccccccCEEeCcCCcccccccc--ccC
Confidence 2333 5555665555554 1222 2345566666666665544433 456
Q ss_pred CCCcceEeeccccCCCC--CcccccccccceEEeeCcccCCcCchhccCcccCCceeecCcccccccC-ccccccccccc
Q 039290 470 QKLQGLYLQNNKLEGSI--PEDLCHLYRLANLYLGDNKLSGRLPACLGNLTSLRDLSLGSNALTSIIP-STLWNLKDILR 546 (1049)
Q Consensus 470 ~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~ 546 (1049)
++|++|++++|++++.. |..+..+++|++|++++|.+++. |..+..+++|++|++++|++++..| ..+..+++|++
T Consensus 347 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 425 (570)
T 2z63_A 347 PSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITM-SSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIY 425 (570)
T ss_dssp TTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEE-EEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCE
T ss_pred CCCCEEeCcCCccCccccccccccccCccCEEECCCCccccc-cccccccCCCCEEEccCCccccccchhhhhcCCCCCE
Confidence 66666666666665432 45566667777777777777643 3337777777777777777777655 46777788888
Q ss_pred ccccCCccCCCCccCcCCCcceeEeeccccccc-ccccccccCCCcccEEEeecccccCCccccccCccCCcEEeccCcc
Q 039290 547 FNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALS-GVIPVTIGGLQGLQLLSLRYNRLQGPIPESFGGLKSLNFVDMSNNN 625 (1049)
Q Consensus 547 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 625 (1049)
|++++|.+++..+..+..+++|++|++++|.++ +.+|..|..+++|+.|+|++|++++..|..|.++++|++|+|++|+
T Consensus 426 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 505 (570)
T 2z63_A 426 LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQ 505 (570)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCc
Confidence 888888887777778888888888889998887 5788999999999999999999998889999999999999999999
Q ss_pred ccCCcccccccccccceeeccCCcccccCCCCCCc---cccccccccCCccccCCC
Q 039290 626 LSGTIPKSMEALSYLKHLNLSFNQLEGEIPTRGPF---ITFSAESFLGNQALCGSP 678 (1049)
Q Consensus 626 l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~---~~~~~~~~~~n~~~cg~~ 678 (1049)
+++..|..+..+++|+.|++++|+++|.+|....+ ..-....+.+.+ .|..|
T Consensus 506 l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~wl~~~~~~~~~~~-~C~~~ 560 (570)
T 2z63_A 506 LKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNSQKEQGSA-KCSGS 560 (570)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHHHHHHHHHTGGGEESCC-BBTTT
T ss_pred CCCCCHHHhhcccCCcEEEecCCcccCCCcchHHHHHHHHhccccCCCch-hhCCC
Confidence 99888888999999999999999999999874322 111122344444 67665
No 14
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.8e-52 Score=505.80 Aligned_cols=499 Identities=22% Similarity=0.212 Sum_probs=323.1
Q ss_pred CceeeeEEEcCCCCcEEEEEEeccccccccCCCCCCcchhhhhhcccCccccccCcccccccCCcEeccccCCccccCcc
Q 039290 60 VCSWIGVTCGVRNRRVTALNISYLGLTGTIPPQLGNLSFLAVLAIRNNSFFGSLPEELSHLRGLKYFDFRFNNFHIEIPS 139 (1049)
Q Consensus 60 ~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~l~~n~~~g~~p~~~~~L~~L~~L~l~~n~~~~~~p~ 139 (1049)
.|.|.|| |+.. +++++ .+|+.+. +.|++|+|++|.+++..|..++++++|++|+|++|++.+..|.
T Consensus 3 ~C~~~~~-c~~~----------~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~ 68 (549)
T 2z81_A 3 SCDASGV-CDGR----------SRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGD 68 (549)
T ss_dssp EECTTSE-EECT----------TSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTT
T ss_pred cCCCCce-EECC----------CCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChh
Confidence 4999999 9643 44555 7787665 6788888888888877778888888888888888888877778
Q ss_pred cccccCCccEEEeCCCCccCCCcccccCCCcccEEcCCCccCcc-ccCCCcccccccCCCCccceEEeeccccCCCCCCC
Q 039290 140 WFVSLPRLQHLLLKHNSFVGKIPETIGYLSLLQELDLSDNQLSG-TIPSSIFNISSCQNLPVLEGLFISYNQLTGPIPTN 218 (1049)
Q Consensus 140 ~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g-~ip~~~~~l~~l~~l~~L~~L~l~~N~l~~~~p~~ 218 (1049)
.|+++++|++|+|++|.+++..|..|+.+++|++|||++|++++ .+|..+. ++++|++|++++|++.+.+|.
T Consensus 69 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~------~l~~L~~L~L~~n~~~~~~~~- 141 (549)
T 2z81_A 69 AFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFP------NLTNLQTLRIGNVETFSEIRR- 141 (549)
T ss_dssp TTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCT------TCTTCCEEEEEESSSCCEECT-
T ss_pred hccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhh------ccCCccEEECCCCccccccCH-
Confidence 88888888888888888887777778888888888888888874 3444443 344566666666664433331
Q ss_pred cccccccceecccccccccccCCCCccccccceEEeccccccccCccccccccceEEEeeccccCCCccccccccccccc
Q 039290 219 LWKCRELHVVSLAFNKFQGGIPRDIGNLTSVRNLFLGNNSLIGEIPNEIGNLRNLEVLGVQSSNLAGLIPASIFNISTLK 298 (1049)
Q Consensus 219 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 298 (1049)
..|+++++|++|+|++|++++.+|..++++++|+.|+++.|.+....+..+..+++|+
T Consensus 142 ----------------------~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~ 199 (549)
T 2z81_A 142 ----------------------IDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVR 199 (549)
T ss_dssp ----------------------TTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBS
T ss_pred ----------------------hhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcccccchhhHhhccccc
Confidence 2344445555555555555544555555555555555554444322111223344555
Q ss_pred eEEeccCccCCCC--CCcccCCCCCccEEEcCCCCCCCCCC----ccccCCCCCceeecccCccccCcccccccccccce
Q 039290 299 ELAVTDNDLLGSL--PSSIDLGLPNLERLFLGENNFSGTIP----SSLTNISELSVLDFGFNSFSGLIPTTFGNLRSLKL 372 (1049)
Q Consensus 299 ~L~l~~N~l~~~~--p~~~~~~l~~L~~L~L~~N~l~~~~p----~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 372 (1049)
+|++++|++.+.. |..+...+++|+.|++++|.+++..+ ..+..+++|+.|++++|.+.+
T Consensus 200 ~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~-------------- 265 (549)
T 2z81_A 200 YLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNG-------------- 265 (549)
T ss_dssp EEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEEC--------------
T ss_pred EEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhccccccccccccccc--------------
Confidence 5555555544321 11222234455555555555443222 222334444555555444443
Q ss_pred eecccccccCCCCCc-ccccccccCCCCcEEEccCCccccCCCCccccccccccEEEccCCccccCCCCCCCCCCCccEE
Q 039290 373 LSLAGNVLTSPTPDL-SFLSSLTSCRNLEIIYLSENPINGILPSSIGNFSISMKSLSMESCNISGGIPKELGNINNLTVI 451 (1049)
Q Consensus 373 L~L~~N~l~~~~~~~-~~l~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L 451 (1049)
+..-. .....+..+.+|+.|+++++.+..... +. .++..+...++|+.|
T Consensus 266 ----------~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~--~~------------------~l~~~~~~~~~L~~L 315 (549)
T 2z81_A 266 ----------LGDFNPSESDVVSELGKVETVTIRRLHIPQFYL--FY------------------DLSTVYSLLEKVKRI 315 (549)
T ss_dssp ----------CSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGG--SC------------------CCCHHHHHSTTCCEE
T ss_pred ----------cccccccchhhhhhhcccccccccccccchhhh--cc------------------cchhhhhhcccceEE
Confidence 21100 001123445666666666665542100 00 011112224567777
Q ss_pred EccCCcccccCCccc-cCcCCCcceEeeccccCCCCC---cccccccccceEEeeCcccCCcCc--hhccCcccCCceee
Q 039290 452 RLGNNELTGTIPVTL-GRLQKLQGLYLQNNKLEGSIP---EDLCHLYRLANLYLGDNKLSGRLP--ACLGNLTSLRDLSL 525 (1049)
Q Consensus 452 ~Ls~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~L~~N~l~~~~p--~~~~~l~~L~~L~L 525 (1049)
++++|+++ .+|..+ ..+++|++|+|++|++++.+| ..+..+++|++|++++|++++..+ ..++.+++|++|++
T Consensus 316 ~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~L 394 (549)
T 2z81_A 316 TVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDI 394 (549)
T ss_dssp EEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEEC
T ss_pred EeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEEC
Confidence 77777776 455544 467777777777777776553 236667777788888887775432 45777888888888
Q ss_pred cCcccccccCcccccccccccccccCCccCCCCccCcCCCcceeEeecccccccccccccccCCCcccEEEeecccccCC
Q 039290 526 GSNALTSIIPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALSGVIPVTIGGLQGLQLLSLRYNRLQGP 605 (1049)
Q Consensus 526 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 605 (1049)
++|++++ +|..+..+++|++|++++|+++.. +..+ .++|++|||++|+|++.+ ..+++|++|+|++|+|+ .
T Consensus 395 s~N~l~~-lp~~~~~~~~L~~L~Ls~N~l~~l-~~~~--~~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ 465 (549)
T 2z81_A 395 SRNTFHP-MPDSCQWPEKMRFLNLSSTGIRVV-KTCI--PQTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLK-T 465 (549)
T ss_dssp TTCCCCC-CCSCCCCCTTCCEEECTTSCCSCC-CTTS--CTTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-S
T ss_pred CCCCCcc-CChhhcccccccEEECCCCCcccc-cchh--cCCceEEECCCCChhhhc----ccCChhcEEECCCCccC-c
Confidence 8888874 677777788888888888887753 3322 257889999999998653 57899999999999999 5
Q ss_pred ccccccCccCCcEEeccCccccCCcccccccccccceeeccCCcccccCCC
Q 039290 606 IPESFGGLKSLNFVDMSNNNLSGTIPKSMEALSYLKHLNLSFNQLEGEIPT 656 (1049)
Q Consensus 606 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~ 656 (1049)
+|. ...+++|++|||++|++++.+|..+..+++|+.|++++|+|.|.+|.
T Consensus 466 ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 515 (549)
T 2z81_A 466 LPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 515 (549)
T ss_dssp CCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHHH
T ss_pred CCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCcc
Confidence 665 46789999999999999988888899999999999999999999884
No 15
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.1e-51 Score=496.42 Aligned_cols=496 Identities=19% Similarity=0.172 Sum_probs=404.0
Q ss_pred CcEEEEEEeccccccccCCCCCCcchhhhhhcccCccccccCcccccccCCcEeccccCCccccCcccccccCCccEEEe
Q 039290 73 RRVTALNISYLGLTGTIPPQLGNLSFLAVLAIRNNSFFGSLPEELSHLRGLKYFDFRFNNFHIEIPSWFVSLPRLQHLLL 152 (1049)
Q Consensus 73 ~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~l~~n~~~g~~p~~~~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L 152 (1049)
.++..|+|+++.+++..+..+++++.|++|+|++|++++..|..++++++|++|+|++|++.+..|..|+++++|++|+|
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 46899999999999877889999999999999999999877788999999999999999999888899999999999999
Q ss_pred CCCCccCCCcccccCCCcccEEcCCCccCcc-ccCCCcccccccCCCCccceEEeeccccCCCCCCCccccccc----ce
Q 039290 153 KHNSFVGKIPETIGYLSLLQELDLSDNQLSG-TIPSSIFNISSCQNLPVLEGLFISYNQLTGPIPTNLWKCREL----HV 227 (1049)
Q Consensus 153 ~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g-~ip~~~~~l~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L----~~ 227 (1049)
++|.+++..+..++.+++|++|+|++|++++ .+|..+.+ +++|++|++++|++++..|..+..+++| +.
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~------l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~ 181 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSN------LTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLS 181 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGG------CTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCE
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhhcc------cCCCCEEeCcCCccceecHHHccchhccchhhhh
Confidence 9999996655679999999999999999986 57887765 4569999999999998888899999999 89
Q ss_pred ecccccccccccCCCCccccccceEEecccccc-ccCccccccccceEEEeeccccCCCccccccccccccceEEeccCc
Q 039290 228 VSLAFNKFQGGIPRDIGNLTSVRNLFLGNNSLI-GEIPNEIGNLRNLEVLGVQSSNLAGLIPASIFNISTLKELAVTDND 306 (1049)
Q Consensus 228 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~ 306 (1049)
+++++|.+++..|..+..+ +|+.|++++|... ..+|..++.+++++.+.+..+.+... ..++.
T Consensus 182 L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~--------~~l~~------- 245 (570)
T 2z63_A 182 LDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNE--------GNLEK------- 245 (570)
T ss_dssp EECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCC--------SSCEE-------
T ss_pred cccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCc--------hhhhh-------
Confidence 9999999998888888766 8999999998544 25677788999998887765433221 11111
Q ss_pred cCCCCCCcccCCCC--CccEEEcCCC-CCCCCCCccccCCCCCceeecccCccccCcccccccccccceeecccccccCC
Q 039290 307 LLGSLPSSIDLGLP--NLERLFLGEN-NFSGTIPSSLTNISELSVLDFGFNSFSGLIPTTFGNLRSLKLLSLAGNVLTSP 383 (1049)
Q Consensus 307 l~~~~p~~~~~~l~--~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 383 (1049)
++...+.+++ .++.+++++| .+.+..|..+..+++|++|++++|.+.+ +|..+..+ +|++|++++|.++.+
T Consensus 246 ----~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~-l~~~~~~~-~L~~L~l~~n~~~~l 319 (570)
T 2z63_A 246 ----FDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIER-VKDFSYNF-GWQHLELVNCKFGQF 319 (570)
T ss_dssp ----CCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEECS-CCBCCSCC-CCSEEEEESCBCSSC
T ss_pred ----cchhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEEecCccchh-hhhhhccC-CccEEeeccCccccc
Confidence 1111111111 3567777777 6777788888888999999999998884 67778888 999999999988865
Q ss_pred CCCcccccccccCCCCcEEEccCCccccCCCCccccccccccEEEccCCccccCCCCCCCCCCCccEEEccCCcccccC-
Q 039290 384 TPDLSFLSSLTSCRNLEIIYLSENPINGILPSSIGNFSISMKSLSMESCNISGGIPKELGNINNLTVIRLGNNELTGTI- 462 (1049)
Q Consensus 384 ~~~~~~l~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~- 462 (1049)
+. ..+++|+.|++++|.+.+..+ . ..+++|++|++++|.+++..
T Consensus 320 ~~--------~~l~~L~~L~l~~n~~~~~~~-------------------------~--~~~~~L~~L~l~~n~l~~~~~ 364 (570)
T 2z63_A 320 PT--------LKLKSLKRLTFTSNKGGNAFS-------------------------E--VDLPSLEFLDLSRNGLSFKGC 364 (570)
T ss_dssp CB--------CBCSSCCEEEEESCBSCCBCC-------------------------C--CBCTTCCEEECCSSCCBEEEE
T ss_pred Cc--------ccccccCEEeCcCCccccccc-------------------------c--ccCCCCCEEeCcCCccCcccc
Confidence 43 245667777777776553322 2 45667777777777777543
Q ss_pred -CccccCcCCCcceEeeccccCCCCCcccccccccceEEeeCcccCCcCc-hhccCcccCCceeecCcccccccCccccc
Q 039290 463 -PVTLGRLQKLQGLYLQNNKLEGSIPEDLCHLYRLANLYLGDNKLSGRLP-ACLGNLTSLRDLSLGSNALTSIIPSTLWN 540 (1049)
Q Consensus 463 -p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 540 (1049)
|..+..+++|++|++++|++.+. +..+..+++|++|++++|.+++..| ..+.++++|++|++++|++++..|..+..
T Consensus 365 ~~~~~~~~~~L~~L~l~~n~l~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 443 (570)
T 2z63_A 365 CSQSDFGTTSLKYLDLSFNGVITM-SSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNG 443 (570)
T ss_dssp EEHHHHTCSCCCEEECCSCSEEEE-EEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTT
T ss_pred ccccccccCccCEEECCCCccccc-cccccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhc
Confidence 56677778888888888887744 3347788888888888888876655 46788888888888888888888888888
Q ss_pred ccccccccccCCccC-CCCccCcCCCcceeEeecccccccccccccccCCCcccEEEeecccccCCccccccCccCCcEE
Q 039290 541 LKDILRFNLSSNSLN-GSLLPDIGNLKVVIEMDLSLNALSGVIPVTIGGLQGLQLLSLRYNRLQGPIPESFGGLKSLNFV 619 (1049)
Q Consensus 541 l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 619 (1049)
+++|++|++++|.++ +.+|..+..+++|++|++++|++++..|..|+.+++|+.|+|++|++++.+|..|.++++|++|
T Consensus 444 l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 523 (570)
T 2z63_A 444 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKI 523 (570)
T ss_dssp CTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEE
T ss_pred CCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEE
Confidence 888888888888887 5678888999999999999999998889999999999999999999999888899999999999
Q ss_pred eccCccccCCccc
Q 039290 620 DMSNNNLSGTIPK 632 (1049)
Q Consensus 620 ~Ls~N~l~~~~p~ 632 (1049)
++++|++++..|.
T Consensus 524 ~l~~N~~~~~~~~ 536 (570)
T 2z63_A 524 WLHTNPWDCSCPR 536 (570)
T ss_dssp ECCSSCBCCCTTT
T ss_pred EecCCcccCCCcc
Confidence 9999999988774
No 16
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=2.3e-52 Score=456.03 Aligned_cols=265 Identities=26% Similarity=0.450 Sum_probs=222.9
Q ss_pred cCCCCCceecCCCcEEEEEEEeC------CCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEE
Q 039290 761 DGFSENKLLGMGSFGSVYKGVLP------DGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKAL 834 (1049)
Q Consensus 761 ~~~~~~~~lg~G~fg~Vy~a~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 834 (1049)
++|.+.+.||+|+||+||+|++. ++..||||+++.......++|.+|++++++++|||||+++|+|.+++..++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 45778899999999999999863 477899999986655556789999999999999999999999999999999
Q ss_pred EEeccCCCChhhhhhcCC------------CccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEE
Q 039290 835 VLEYMSNGSLEKCLYSDN------------YFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHL 902 (1049)
Q Consensus 835 v~e~~~~g~L~~~l~~~~------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl 902 (1049)
|||||++|+|.+++...+ ..+++.++.+|+.||++||+||| +++||||||||+|||+++++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccCHhhEEECCCCcEEE
Confidence 999999999999997642 46899999999999999999999 999999999999999999999999
Q ss_pred ecccCceecCCCcccc-ccccccccCcccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCCccccccchHHHhhhhcc
Q 039290 903 SDFGIAKILGKEESMR-QTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFT-KKKPTDEIFAGEMSLKRWVGDSL 980 (1049)
Q Consensus 903 ~DfGla~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 980 (1049)
+|||+|+......... .....||+.|||||++.+..|+.++|||||||++|||+| |+.||.+....+.. ..+..
T Consensus 170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~--~~i~~-- 245 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVI--ECITQ-- 245 (299)
T ss_dssp CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH--HHHHH--
T ss_pred CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHH--HHHHc--
Confidence 9999998765443322 233568999999999999999999999999999999999 89999864332211 11100
Q ss_pred ccCCcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhhhhccCC
Q 039290 981 LSCSITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETLSAYIDV 1049 (1049)
Q Consensus 981 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~~~~~~~ 1049 (1049)
..+.+.+..+++++.+++.+||+.||++||||+|+++.|+++.+.-..|+|+
T Consensus 246 -----------------~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~p~~ldi 297 (299)
T 4asz_A 246 -----------------GRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKASPVYLDI 297 (299)
T ss_dssp -----------------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCCCSCC
T ss_pred -----------------CCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcCCccccC
Confidence 0011223456788999999999999999999999999999999999999986
No 17
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.5e-51 Score=503.17 Aligned_cols=507 Identities=18% Similarity=0.235 Sum_probs=286.5
Q ss_pred ChhhHHHHHHHHHhcccCCCCcccccCCCCCC----Cceeee-EEEcCC--CCcEEEEEEeccccccccCCCCCCcchhh
Q 039290 28 VTTDQFALLALKEHIKHDPSNLLANNWSTTSS----VCSWIG-VTCGVR--NRRVTALNISYLGLTGTIPPQLGNLSFLA 100 (1049)
Q Consensus 28 ~~~d~~all~~k~~~~~~~~~~l~~~w~~~~~----~c~w~g-v~c~~~--~~~v~~l~l~~~~l~g~~~~~~~~l~~L~ 100 (1049)
...+.+.-.++++-+..- .+ ..|....+ .|.|.. ..|..- ..-|+. .. . .+++
T Consensus 25 ~~~~~~d~~aL~~~~~~~-~~---~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C---~~---------~----~~V~ 84 (636)
T 4eco_A 25 TAEYIKDYLALKEIWDAL-NG---KNWSQQGFGTQPGANWNFNKELDMWGAQPGVSL---NS---------N----GRVT 84 (636)
T ss_dssp CCHHHHHHHHHHHHHHHT-TG---GGCCCCC------CCCCCSSCGGGTTCCTTEEE---CT---------T----CCEE
T ss_pred hhhHHHHHHHHHHHHHHc-CC---CCcccCCcCCccCCCCCCCCCcccccCCCCeEE---cC---------C----CCEE
Confidence 346777888888766432 22 36874432 247962 222211 012321 10 0 3567
Q ss_pred hhhcccCccccccCcccccccCCcEeccccCCc------cc------cCcccccccCCccEEEeCCCCccCCCcccccC-
Q 039290 101 VLAIRNNSFFGSLPEELSHLRGLKYFDFRFNNF------HI------EIPSWFVSLPRLQHLLLKHNSFVGKIPETIGY- 167 (1049)
Q Consensus 101 ~L~l~~n~~~g~~p~~~~~L~~L~~L~l~~n~~------~~------~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~- 167 (1049)
.|+|++|++.|.+|+++++|++|++|||++|++ .| .+|... +..|+ +++++|.+.+.+|..++.
T Consensus 85 ~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~ 161 (636)
T 4eco_A 85 GLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDL 161 (636)
T ss_dssp EEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHH
T ss_pred EEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHH
Confidence 888999999999999999999999999988876 23 444433 45566 677777777666666653
Q ss_pred CCcccEEcCCCccCccccCCCcccccccCCCCccceEE--eeccccCCCCCCCcccccccceecccccccccc-------
Q 039290 168 LSLLQELDLSDNQLSGTIPSSIFNISSCQNLPVLEGLF--ISYNQLTGPIPTNLWKCRELHVVSLAFNKFQGG------- 238 (1049)
Q Consensus 168 l~~L~~L~Ls~N~l~g~ip~~~~~l~~l~~l~~L~~L~--l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~------- 238 (1049)
+..+..+++....+... ....++.++ ..+|+++| ||..++++++|++|+|++|+++|.
T Consensus 162 ~~~l~~~~l~~~~~~~~------------~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~ 228 (636)
T 4eco_A 162 IKDCINSDPQQKSIKKS------------SRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWE 228 (636)
T ss_dssp HHHHHHHCTTSCCCCCC------------CCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCS
T ss_pred HHHHhhcCccccccccc------------cccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCcccccccccccc
Confidence 23444444443333210 000111111 22455555 566666666666666666666654
Q ss_pred ----------cCCCCc--cccccceEEeccccccccCccccccccceEEEeecccc-CCC-ccccccccc------cccc
Q 039290 239 ----------IPRDIG--NLTSVRNLFLGNNSLIGEIPNEIGNLRNLEVLGVQSSN-LAG-LIPASIFNI------STLK 298 (1049)
Q Consensus 239 ----------~p~~~~--~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~-l~~-~~p~~~~~l------~~L~ 298 (1049)
+|..++ ++++|++|+|++|++.+.+|..|+++++|++|+|++|+ +++ .+|..++++ ++|+
T Consensus 229 ~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~ 308 (636)
T 4eco_A 229 NENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQ 308 (636)
T ss_dssp CTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCC
T ss_pred ccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCC
Confidence 666666 66666666666666666666666666666666666666 665 566666554 4555
Q ss_pred eEEeccCccCCCCCC-cccCCCCCccEEEcCCCCCCCCCCccccCCCCCceeecccCccccCcccccccccccceeeccc
Q 039290 299 ELAVTDNDLLGSLPS-SIDLGLPNLERLFLGENNFSGTIPSSLTNISELSVLDFGFNSFSGLIPTTFGNLRSLKLLSLAG 377 (1049)
Q Consensus 299 ~L~l~~N~l~~~~p~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 377 (1049)
+|++++|+++ .+|. . .++++++|++|++++|++.|.+| .|+.+++|++|++++
T Consensus 309 ~L~L~~n~l~-~ip~~~------------------------~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~ 362 (636)
T 4eco_A 309 IIYIGYNNLK-TFPVET------------------------SLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAY 362 (636)
T ss_dssp EEECCSSCCS-SCCCHH------------------------HHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCS
T ss_pred EEECCCCcCC-ccCchh------------------------hhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCC
Confidence 5555555544 4444 0 44444444444444444444444 444444444444444
Q ss_pred ccccCCCCCcccccccccCCC-CcEEEccCCccccCCCCcccccc-ccccEEEccCCccccCCCCCCC-------CCCCc
Q 039290 378 NVLTSPTPDLSFLSSLTSCRN-LEIIYLSENPINGILPSSIGNFS-ISMKSLSMESCNISGGIPKELG-------NINNL 448 (1049)
Q Consensus 378 N~l~~~~~~~~~l~~l~~l~~-L~~L~Ls~N~i~~~~p~~~~~~~-~~L~~L~L~~n~i~~~~p~~~~-------~l~~L 448 (1049)
|.++.++.. +..+++ |++|++++|.++ .+|..+.... .+|+.|++++|.+++.+|..|. .+++|
T Consensus 363 N~l~~lp~~------l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L 435 (636)
T 4eco_A 363 NQITEIPAN------FCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINV 435 (636)
T ss_dssp SEEEECCTT------SEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCE
T ss_pred CccccccHh------hhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCC
Confidence 444433321 333444 444444444444 3333333221 1455555555555555555555 66778
Q ss_pred cEEEccCCcccccCCccccCcCCCcceEeeccccCCCCCccccc-c-------cccceEEeeCcccCCcCchhcc--Ccc
Q 039290 449 TVIRLGNNELTGTIPVTLGRLQKLQGLYLQNNKLEGSIPEDLCH-L-------YRLANLYLGDNKLSGRLPACLG--NLT 518 (1049)
Q Consensus 449 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-l-------~~L~~L~L~~N~l~~~~p~~~~--~l~ 518 (1049)
++|+|++|++++..+..+..+++|++|+|++|+++ .+|..+.. . ++|++|+|++|+++ .+|..+. .++
T Consensus 436 ~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~ 513 (636)
T 4eco_A 436 SSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLP 513 (636)
T ss_dssp EEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCT
T ss_pred CEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCC
Confidence 88888888887443444556778888888888887 45544332 2 26666666666666 4555554 666
Q ss_pred cCCceeecCcccccccCcccccccccccccccCCccCCCCccCcCCCcceeEeecccccccccccccccCCCcccEEEee
Q 039290 519 SLRDLSLGSNALTSIIPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALSGVIPVTIGGLQGLQLLSLR 598 (1049)
Q Consensus 519 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 598 (1049)
+|+.|+|++|++++ +|..+..+++|+.|+|++|+ ++++|++.+.+|..|+.+++|+.|+|+
T Consensus 514 ~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~------------------~ls~N~l~~~~p~~l~~l~~L~~L~Ls 574 (636)
T 4eco_A 514 YLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQR------------------DAQGNRTLREWPEGITLCPSLTQLQIG 574 (636)
T ss_dssp TCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCB------------------CTTCCBCCCCCCTTGGGCSSCCEEECC
T ss_pred CcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCc------------------ccccCcccccChHHHhcCCCCCEEECC
Confidence 66666666666665 55556566666666665554 345566666666666666666666666
Q ss_pred cccccCCccccccCccCCcEEeccCcccc
Q 039290 599 YNRLQGPIPESFGGLKSLNFVDMSNNNLS 627 (1049)
Q Consensus 599 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 627 (1049)
+|+|+ .+|..+. ++|++|||++|++.
T Consensus 575 ~N~l~-~ip~~~~--~~L~~L~Ls~N~l~ 600 (636)
T 4eco_A 575 SNDIR-KVNEKIT--PNISVLDIKDNPNI 600 (636)
T ss_dssp SSCCC-BCCSCCC--TTCCEEECCSCTTC
T ss_pred CCcCC-ccCHhHh--CcCCEEECcCCCCc
Confidence 66663 4454444 45666666666554
No 18
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.8e-51 Score=455.45 Aligned_cols=264 Identities=26% Similarity=0.448 Sum_probs=211.6
Q ss_pred CCCCCceecCCCcEEEEEEEeC------CCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEE
Q 039290 762 GFSENKLLGMGSFGSVYKGVLP------DGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALV 835 (1049)
Q Consensus 762 ~~~~~~~lg~G~fg~Vy~a~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 835 (1049)
+|...++||+|+||+||+|++. +++.||||+++.......++|.+|++++++++|||||+++|+|.+.+..++|
T Consensus 42 d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV 121 (329)
T 4aoj_A 42 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMV 121 (329)
T ss_dssp GEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEE
T ss_pred HeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 4667789999999999999864 4788999999866555567899999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCC--------------CccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceE
Q 039290 836 LEYMSNGSLEKCLYSDN--------------YFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGH 901 (1049)
Q Consensus 836 ~e~~~~g~L~~~l~~~~--------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~k 901 (1049)
||||++|+|.++++..+ ..+++.++.+|+.||++||+||| +++||||||||+|||+++++.+|
T Consensus 122 ~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLKp~NILl~~~~~~K 198 (329)
T 4aoj_A 122 FEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHRDLATRNCLVGQGLVVK 198 (329)
T ss_dssp EECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEE
T ss_pred EEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHhhEEECCCCcEE
Confidence 99999999999987542 35899999999999999999999 99999999999999999999999
Q ss_pred EecccCceecCCCccc-cccccccccCcccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCCccccccchHHHhhhhc
Q 039290 902 LSDFGIAKILGKEESM-RQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFT-KKKPTDEIFAGEMSLKRWVGDS 979 (1049)
Q Consensus 902 l~DfGla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~ 979 (1049)
|+|||+|+........ ......||+.|||||++.+..++.++|||||||++|||+| |+.||.+....+. ...+..
T Consensus 199 i~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~--~~~i~~- 275 (329)
T 4aoj_A 199 IGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEA--IDCITQ- 275 (329)
T ss_dssp ECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHH--HHHHHH-
T ss_pred EcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHH--HHHHHc-
Confidence 9999999876443322 2334678999999999999999999999999999999999 8999976432221 111100
Q ss_pred cccCCcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhhhhccCC
Q 039290 980 LLSCSITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETLSAYIDV 1049 (1049)
Q Consensus 980 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~~~~~~~ 1049 (1049)
..+...+..+++++.+++.+||+.||++||||+||+++|+.+.+.-..|+|+
T Consensus 276 ------------------g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~pp~~ld~ 327 (329)
T 4aoj_A 276 ------------------GRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPPVYLDV 327 (329)
T ss_dssp ------------------TCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSCC-----
T ss_pred ------------------CCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCCcccccC
Confidence 0112223456788999999999999999999999999999999988889885
No 19
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=2.1e-50 Score=440.16 Aligned_cols=262 Identities=27% Similarity=0.440 Sum_probs=208.9
Q ss_pred hcCCCCCceecCCCcEEEEEEEeCCCcEEEEEEeecccC--CCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEEe
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLPDGMEIAAKVFHMEFD--GSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVLE 837 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 837 (1049)
.++++..++||+|+||+||+|++.+ .||||+++.... ...+.|.+|++++++++|||||++++++.+ +..++|||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE 111 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence 4567888999999999999999743 699999875432 235679999999999999999999998865 56899999
Q ss_pred ccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCc-c
Q 039290 838 YMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEE-S 916 (1049)
Q Consensus 838 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~-~ 916 (1049)
||++|+|.+++...+..+++.++.+|+.|||+||+||| +++||||||||+|||+++++.+||+|||+|+...... .
T Consensus 112 y~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH---~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~ 188 (307)
T 3omv_A 112 WCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp CCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCSSSEEEETTEEEEECCCSSCBC-------
T ss_pred cCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcc
Confidence 99999999999887777999999999999999999999 9999999999999999999999999999998764332 2
Q ss_pred ccccccccccCcccccccCC---CCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhccccc
Q 039290 917 MRQTKTLGTIGYMAPEYGRE---GKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANL 993 (1049)
Q Consensus 917 ~~~~~~~~~~~y~aPE~~~~---~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1049)
......+||+.|||||++.+ ..|+.++|||||||++|||+||+.||.+....+..... +......+
T Consensus 189 ~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~-~~~~~~~p---------- 257 (307)
T 3omv_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFM-VGRGYASP---------- 257 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHH-HHTTCCCC----------
T ss_pred eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHH-HhcCCCCC----------
Confidence 23345679999999999853 46899999999999999999999999764322221111 11110000
Q ss_pred ccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhh
Q 039290 994 LNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETL 1043 (1049)
Q Consensus 994 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~ 1043 (1049)
.....+.++++++.+++.+||+.||++||||+||+++|+.+...+
T Consensus 258 -----~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l 302 (307)
T 3omv_A 258 -----DLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp -----CSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred -----CcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence 001122456788999999999999999999999999999887654
No 20
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=8.9e-50 Score=494.08 Aligned_cols=383 Identities=21% Similarity=0.295 Sum_probs=267.6
Q ss_pred cccccccCCCCccccccceEEeccccccc-----------------cCccccc--cccceEEEeeccccCCCcccccccc
Q 039290 233 NKFQGGIPRDIGNLTSVRNLFLGNNSLIG-----------------EIPNEIG--NLRNLEVLGVQSSNLAGLIPASIFN 293 (1049)
Q Consensus 233 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-----------------~~p~~l~--~l~~L~~L~L~~n~l~~~~p~~~~~ 293 (1049)
|+++| +|..|+++++|++|+|++|++++ .+|+.++ ++++|++|+|++|++.+.+|..+.+
T Consensus 435 N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~ 513 (876)
T 4ecn_A 435 NRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYD 513 (876)
T ss_dssp CEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGG
T ss_pred Ccccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhC
Confidence 55555 55555556666666666666555 2566555 6666666666666666666666666
Q ss_pred ccccceEEeccCc-cCC-CCCCccc------CCCCCccEEEcCCCCCCCCCCc--cccCCCCCceeecccCccccCcccc
Q 039290 294 ISTLKELAVTDND-LLG-SLPSSID------LGLPNLERLFLGENNFSGTIPS--SLTNISELSVLDFGFNSFSGLIPTT 363 (1049)
Q Consensus 294 l~~L~~L~l~~N~-l~~-~~p~~~~------~~l~~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~ 363 (1049)
+++|++|++++|+ ++| .+|..+. ..+++|++|+|++|+++ .+|. .++++++|+.|+|++|+++ .+| .
T Consensus 514 L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~ 590 (876)
T 4ecn_A 514 LPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-A 590 (876)
T ss_dssp CSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-C
T ss_pred CCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-h
Confidence 6666666666665 555 4554332 23456777777777777 6666 6777777777777777776 555 6
Q ss_pred cccccccceeecccccccCCCCCcccccccccCCC-CcEEEccCCccccCCCCcccccc-ccccEEEccCCccccCCCCC
Q 039290 364 FGNLRSLKLLSLAGNVLTSPTPDLSFLSSLTSCRN-LEIIYLSENPINGILPSSIGNFS-ISMKSLSMESCNISGGIPKE 441 (1049)
Q Consensus 364 ~~~l~~L~~L~L~~N~l~~~~~~~~~l~~l~~l~~-L~~L~Ls~N~i~~~~p~~~~~~~-~~L~~L~L~~n~i~~~~p~~ 441 (1049)
|+.+++|+.|+|++|.++.++.. +..+++ |+.|+|++|+++ .+|..+.... .+|+.|+|++|++.+.+|..
T Consensus 591 ~~~L~~L~~L~Ls~N~l~~lp~~------l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l 663 (876)
T 4ecn_A 591 FGTNVKLTDLKLDYNQIEEIPED------FCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNI 663 (876)
T ss_dssp CCTTSEESEEECCSSCCSCCCTT------SCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSC
T ss_pred hcCCCcceEEECcCCccccchHH------HhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccc
Confidence 77777777777777777654432 455666 777777777776 4555554443 23777777777777655532
Q ss_pred ---CC--CCCCccEEEccCCcccccCCcc-ccCcCCCcceEeeccccCCCCCccccc--------ccccceEEeeCcccC
Q 039290 442 ---LG--NINNLTVIRLGNNELTGTIPVT-LGRLQKLQGLYLQNNKLEGSIPEDLCH--------LYRLANLYLGDNKLS 507 (1049)
Q Consensus 442 ---~~--~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~--------l~~L~~L~L~~N~l~ 507 (1049)
+. .+++|+.|+|++|.++ .+|.. +..+++|+.|+|++|+|+ .+|..+.. +++|+.|+|++|+++
T Consensus 664 ~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~ 741 (876)
T 4ecn_A 664 SCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT 741 (876)
T ss_dssp SSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC
T ss_pred hhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc
Confidence 22 3458899999999998 45554 457888999999999988 56655443 237888888888888
Q ss_pred CcCchhcc--CcccCCceeecCcccccccCcccccccccccccccCCccCCCCccCcCCCcceeEeeccccccccccccc
Q 039290 508 GRLPACLG--NLTSLRDLSLGSNALTSIIPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALSGVIPVT 585 (1049)
Q Consensus 508 ~~~p~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 585 (1049)
.+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|+|++|+ ++++|++.+.+|..
T Consensus 742 -~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~------------------~ls~N~l~~~ip~~ 801 (876)
T 4ecn_A 742 -SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQR------------------DAEGNRILRQWPTG 801 (876)
T ss_dssp -CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCB------------------CTTCCBCCCCCCTT
T ss_pred -cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCC------------------CcccccccccChHH
Confidence 6777776 88888888888888887 67778888888888888775 56778888888999
Q ss_pred ccCCCcccEEEeecccccCCccccccCccCCcEEeccCccccCCcccccccccccceeeccCCccc
Q 039290 586 IGGLQGLQLLSLRYNRLQGPIPESFGGLKSLNFVDMSNNNLSGTIPKSMEALSYLKHLNLSFNQLE 651 (1049)
Q Consensus 586 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~N~l~ 651 (1049)
|.++++|+.|+|++|+| +.+|..+. ++|+.|||++|++....+..+.....+..+.|++|++.
T Consensus 802 l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~n~~~ 864 (876)
T 4ecn_A 802 ITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQ 864 (876)
T ss_dssp GGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEECGGGHHHHHTTCCEEECCTTS
T ss_pred HhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccChHHccccccchheeecCCCcc
Confidence 99999999999999999 57777765 58999999999988666666666666777778777664
No 21
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=6.5e-49 Score=483.77 Aligned_cols=535 Identities=19% Similarity=0.157 Sum_probs=405.0
Q ss_pred EEeccccccccCCCCCCcchhhhhhcccCccccccCcccccccCCcEeccccCCccccCcccccccCCccEEEeCCCCcc
Q 039290 79 NISYLGLTGTIPPQLGNLSFLAVLAIRNNSFFGSLPEELSHLRGLKYFDFRFNNFHIEIPSWFVSLPRLQHLLLKHNSFV 158 (1049)
Q Consensus 79 ~l~~~~l~g~~~~~~~~l~~L~~L~l~~n~~~g~~p~~~~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~ 158 (1049)
+-++.+|+ .||+.+. +.+++|||++|++++..|..|++|++|++|||++|++++..|..|.+|++|++|+|++|+++
T Consensus 37 ~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~ 113 (635)
T 4g8a_A 37 QCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ 113 (635)
T ss_dssp ECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC
T ss_pred ECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCC
Confidence 45566777 7887654 47888999999998655678889999999999999998777788999999999999999998
Q ss_pred CCCcccccCCCcccEEcCCCccCccccCCCcccccccCCCCccceEEeeccccCC-CCCCCcccccccceeccccccccc
Q 039290 159 GKIPETIGYLSLLQELDLSDNQLSGTIPSSIFNISSCQNLPVLEGLFISYNQLTG-PIPTNLWKCRELHVVSLAFNKFQG 237 (1049)
Q Consensus 159 ~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~l~~l~~L~~L~l~~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~~ 237 (1049)
+..|..|+++++|++|+|++|++++..|..++ ++++|++|+|++|++++ .+|..+..+++|+.|+|++|++++
T Consensus 114 ~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~------~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~ 187 (635)
T 4g8a_A 114 SLALGAFSGLSSLQKLVAVETNLASLENFPIG------HLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 187 (635)
T ss_dssp EECGGGGTTCTTCCEEECTTSCCCCSTTCCCT------TCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCE
T ss_pred CCCHHHhcCCCCCCEEECCCCcCCCCChhhhh------cCcccCeeccccCccccCCCchhhccchhhhhhcccCccccc
Confidence 76667789999999999999999843333343 45668889999998875 467777888888888888888888
Q ss_pred ccCCCCccccccc----eEEeccccccccCccccccccceEEEeeccccCCCc-cccccccccccceEEeccCccCCCCC
Q 039290 238 GIPRDIGNLTSVR----NLFLGNNSLIGEIPNEIGNLRNLEVLGVQSSNLAGL-IPASIFNISTLKELAVTDNDLLGSLP 312 (1049)
Q Consensus 238 ~~p~~~~~l~~L~----~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~p 312 (1049)
..|..|..+.+++ .++++.|.++...+. ......++.+++.+|..... .+..+..+..++...+..+....
T Consensus 188 ~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~-~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~--- 263 (635)
T 4g8a_A 188 IYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPG-AFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRN--- 263 (635)
T ss_dssp ECGGGGHHHHTCTTCCCEEECTTCCCCEECTT-TTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTT---
T ss_pred cccccccchhhhhhhhhhhhcccCcccccCcc-cccchhhhhhhhhcccccccccchhhcCCccccccccccccccc---
Confidence 7787777766544 577888888744443 33444567777777765533 23445566666655554433221
Q ss_pred CcccCCCCCccEEEcCCCCCCCCCCccccCCCCCceeecccCcccc---CcccccccccccceeecccccccCCCCCccc
Q 039290 313 SSIDLGLPNLERLFLGENNFSGTIPSSLTNISELSVLDFGFNSFSG---LIPTTFGNLRSLKLLSLAGNVLTSPTPDLSF 389 (1049)
Q Consensus 313 ~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~---~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 389 (1049)
...+.......+..+..+..+++..+.... ..+..+..+.+++.+.+.+|.+..+.
T Consensus 264 ----------------~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~----- 322 (635)
T 4g8a_A 264 ----------------EGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVK----- 322 (635)
T ss_dssp ----------------SCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECG-----
T ss_pred ----------------ccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhccccccccccccccccc-----
Confidence 011122223334444455555554443322 12334555666777777776665432
Q ss_pred ccccccCCCCcEEEccCCccccCCCCccccccccccEEEccCCccccCCCCCCCCCCCccEEEccCCcccc--cCCcccc
Q 039290 390 LSSLTSCRNLEIIYLSENPINGILPSSIGNFSISMKSLSMESCNISGGIPKELGNINNLTVIRLGNNELTG--TIPVTLG 467 (1049)
Q Consensus 390 l~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~ 467 (1049)
.+.....|+.|++++|.+.+..+..+ ..|+.+++..|.+... .....+++|+.|++++|.+.. ..+..+.
T Consensus 323 --~~~~~~~L~~L~l~~~~~~~~~~~~l----~~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~ 394 (635)
T 4g8a_A 323 --DFSYNFGWQHLELVNCKFGQFPTLKL----KSLKRLTFTSNKGGNA--FSEVDLPSLEFLDLSRNGLSFKGCCSQSDF 394 (635)
T ss_dssp --GGGSCCCCSEEEEESCEESSCCCCBC----TTCCEEEEESCCSCCB--CCCCBCTTCCEEECCSSCCBEEEECCHHHH
T ss_pred --ccccchhhhhhhcccccccCcCcccc----hhhhhcccccccCCCC--cccccccccccchhhccccccccccccchh
Confidence 24445667777777777765544322 2567777777776533 234578899999999998863 4566777
Q ss_pred CcCCCcceEeeccccCCCCCcccccccccceEEeeCcccCCcCc-hhccCcccCCceeecCcccccccCccccccccccc
Q 039290 468 RLQKLQGLYLQNNKLEGSIPEDLCHLYRLANLYLGDNKLSGRLP-ACLGNLTSLRDLSLGSNALTSIIPSTLWNLKDILR 546 (1049)
Q Consensus 468 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 546 (1049)
.+.+|+.|+++.|.+. ..+..+..+++|+.++++.|......+ ..+..+++++.++++.|++.+..|..+..++.++.
T Consensus 395 ~~~~L~~L~~~~~~~~-~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~ 473 (635)
T 4g8a_A 395 GTISLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEV 473 (635)
T ss_dssp SCSCCCEEECCSCSEE-EECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCE
T ss_pred hhhhhhhhhccccccc-cccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhh
Confidence 8889999999999987 456678889999999999888765544 56888999999999999999999999999999999
Q ss_pred ccccCCcc-CCCCccCcCCCcceeEeecccccccccccccccCCCcccEEEeecccccCCccccccCccCCcEEeccCcc
Q 039290 547 FNLSSNSL-NGSLLPDIGNLKVVIEMDLSLNALSGVIPVTIGGLQGLQLLSLRYNRLQGPIPESFGGLKSLNFVDMSNNN 625 (1049)
Q Consensus 547 L~Ls~N~l-~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 625 (1049)
|++++|.+ .+..|..|..+++|++|||++|+|++..|..|+++++|+.|+|++|+|++.+|..|.++++|++|||++|+
T Consensus 474 L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~ 553 (635)
T 4g8a_A 474 LKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNH 553 (635)
T ss_dssp EECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSC
T ss_pred hhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCc
Confidence 99999974 44577889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCcccccccc-cccceeeccCCcccccCCC
Q 039290 626 LSGTIPKSMEAL-SYLKHLNLSFNQLEGEIPT 656 (1049)
Q Consensus 626 l~~~~p~~~~~l-~~L~~l~l~~N~l~~~~p~ 656 (1049)
|++..|..+..+ ++|++|+|++|+|.|.|..
T Consensus 554 l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~ 585 (635)
T 4g8a_A 554 IMTSKKQELQHFPSSLAFLNLTQNDFACTCEH 585 (635)
T ss_dssp CCBCCSSCTTCCCTTCCEEECTTCCBCCSGGG
T ss_pred CCCCCHHHHHhhhCcCCEEEeeCCCCcccCCc
Confidence 999999999988 6899999999999999874
No 22
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=3.6e-50 Score=443.35 Aligned_cols=250 Identities=23% Similarity=0.298 Sum_probs=213.2
Q ss_pred cCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEEecc
Q 039290 761 DGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVLEYM 839 (1049)
Q Consensus 761 ~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 839 (1049)
..|+..++||+|+||+||+|++. +|+.||||++........+.+.+|++++++++|||||++++++.+++..|+|||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 45999999999999999999964 79999999998776667788999999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCccccc
Q 039290 840 SNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEESMRQ 919 (1049)
Q Consensus 840 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~~~~~ 919 (1049)
+||+|.+++... .+++.+++.++.||+.||+||| ++|||||||||+|||++.+|.+||+|||+|+.+..... ..
T Consensus 154 ~gg~L~~~l~~~--~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~-~~ 227 (346)
T 4fih_A 154 EGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-RR 227 (346)
T ss_dssp TTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC-CB
T ss_pred CCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCC-cc
Confidence 999999998764 4899999999999999999999 99999999999999999999999999999998754433 23
Q ss_pred cccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhccccccccccc
Q 039290 920 TKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLLNCEEN 999 (1049)
Q Consensus 920 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 999 (1049)
...+||+.|||||++.+..|+.++||||+||++|||++|+.||.+....+ ....+... ...
T Consensus 228 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~--~~~~i~~~-----------------~~~ 288 (346)
T 4fih_A 228 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK--AMKMIRDN-----------------LPP 288 (346)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHHHS-----------------SCC
T ss_pred cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH--HHHHHHcC-----------------CCC
Confidence 45789999999999999999999999999999999999999997532211 11111000 001
Q ss_pred CchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 1000 DFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 1000 ~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
.......+++++.+++.+||+.||++|||++|+++|
T Consensus 289 ~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 289 RLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp CCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 112223456788999999999999999999999886
No 23
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=2.8e-50 Score=441.53 Aligned_cols=254 Identities=25% Similarity=0.413 Sum_probs=210.4
Q ss_pred CCCCCceecCCCcEEEEEEEeC------CCcEEEEEEeeccc-CCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEE
Q 039290 762 GFSENKLLGMGSFGSVYKGVLP------DGMEIAAKVFHMEF-DGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKAL 834 (1049)
Q Consensus 762 ~~~~~~~lg~G~fg~Vy~a~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 834 (1049)
+++..++||+|+||+||+|++. +++.||||+++... ....++|.+|+.++++++|||||+++|+|.+++..++
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence 3556789999999999999863 56789999997554 3346789999999999999999999999999999999
Q ss_pred EEeccCCCChhhhhhcCC---------------CccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCc
Q 039290 835 VLEYMSNGSLEKCLYSDN---------------YFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMV 899 (1049)
Q Consensus 835 v~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~ 899 (1049)
|||||++|+|.+++.... ..+++.++.+|+.|||+||+||| +++||||||||+|||+++++.
T Consensus 107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGC
T ss_pred EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCccccceEECCCCC
Confidence 999999999999996432 35899999999999999999999 999999999999999999999
Q ss_pred eEEecccCceecCCCcc-ccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCCccccccchHHHhhh
Q 039290 900 GHLSDFGIAKILGKEES-MRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFT-KKKPTDEIFAGEMSLKRWVG 977 (1049)
Q Consensus 900 ~kl~DfGla~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~ 977 (1049)
+||+|||+|+....... .......||+.|||||++.++.++.++|||||||++|||+| |..||.+....+ ....+.
T Consensus 184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~--~~~~i~ 261 (308)
T 4gt4_A 184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD--VVEMIR 261 (308)
T ss_dssp EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHH--HHHHHH
T ss_pred EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHH--HHHHHH
Confidence 99999999987644332 22344678999999999999999999999999999999999 899997643222 111111
Q ss_pred hccccCCcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 039290 978 DSLLSCSITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRI 1039 (1049)
Q Consensus 978 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i 1039 (1049)
. ..+.+.+.+++.++.++|.+||+.||++||||+||+++|++.
T Consensus 262 ~-------------------~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 262 N-------------------RQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp T-------------------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred c-------------------CCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 0 011223345778899999999999999999999999998753
No 24
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.5e-49 Score=476.62 Aligned_cols=457 Identities=18% Similarity=0.247 Sum_probs=303.4
Q ss_pred hhhcccCccccccCcccccccCCcEeccccCCccccCcccccccCCccEEEeCCCCccCCCcccccCCCcccEEcCCCcc
Q 039290 101 VLAIRNNSFFGSLPEELSHLRGLKYFDFRFNNFHIEIPSWFVSLPRLQHLLLKHNSFVGKIPETIGYLSLLQELDLSDNQ 180 (1049)
Q Consensus 101 ~L~l~~n~~~g~~p~~~~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~ 180 (1049)
+|++++|+++ .+|..+. ++|++|||++|++.+..|..|.++++|++|+|++|++++..|+.|+.+++|++|||++|+
T Consensus 4 ~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 80 (520)
T 2z7x_B 4 LVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNK 80 (520)
T ss_dssp EEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSC
T ss_pred eEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCc
Confidence 5677777777 5776665 677777777777776666777777777777777777776667777777777777777777
Q ss_pred CccccCCCcccccccCCCCccceEEeeccccCC-CCCCCcccccccceecccccccccccCCCCccccccceEEeccccc
Q 039290 181 LSGTIPSSIFNISSCQNLPVLEGLFISYNQLTG-PIPTNLWKCRELHVVSLAFNKFQGGIPRDIGNLTSVRNLFLGNNSL 259 (1049)
Q Consensus 181 l~g~ip~~~~~l~~l~~l~~L~~L~l~~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 259 (1049)
++ .+|.. .+++|++|+|++|++++ .+|..+ +++++|++|+|++|++
T Consensus 81 l~-~lp~~--------~l~~L~~L~L~~N~l~~~~~p~~~------------------------~~l~~L~~L~L~~n~l 127 (520)
T 2z7x_B 81 LV-KISCH--------PTVNLKHLDLSFNAFDALPICKEF------------------------GNMSQLKFLGLSTTHL 127 (520)
T ss_dssp CC-EEECC--------CCCCCSEEECCSSCCSSCCCCGGG------------------------GGCTTCCEEEEEESSC
T ss_pred ee-ecCcc--------ccCCccEEeccCCccccccchhhh------------------------ccCCcceEEEecCccc
Confidence 76 56654 13446666666666654 344444 4444444444444444
Q ss_pred cccCccccccccce--EEEeeccccC--CCcccccccccc-ccceEEeccCccCCCCCCcccCCCCCccEEEcCCCCCCC
Q 039290 260 IGEIPNEIGNLRNL--EVLGVQSSNL--AGLIPASIFNIS-TLKELAVTDNDLLGSLPSSIDLGLPNLERLFLGENNFSG 334 (1049)
Q Consensus 260 ~~~~p~~l~~l~~L--~~L~L~~n~l--~~~~p~~~~~l~-~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~ 334 (1049)
++ ..++.+++| +.|++++|++ .+..|..+..+. +...+++++|++.+.++..
T Consensus 128 ~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~-------------------- 184 (520)
T 2z7x_B 128 EK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDV-------------------- 184 (520)
T ss_dssp CG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCC--------------------
T ss_pred ch---hhccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhh--------------------
Confidence 43 233334444 5555555544 444444443332 1222334444444333333
Q ss_pred CCCccccCCCCCceeecccCc-------cccCcccccccccccceeecccccccCCCCCcccccccccCCCCcEEEccCC
Q 039290 335 TIPSSLTNISELSVLDFGFNS-------FSGLIPTTFGNLRSLKLLSLAGNVLTSPTPDLSFLSSLTSCRNLEIIYLSEN 407 (1049)
Q Consensus 335 ~~p~~~~~l~~L~~L~Ls~N~-------l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N 407 (1049)
.+.++++|+.|++++|. +.+.+| .++.+++|+.|++++|.++..... .+.....+++|++|++++|
T Consensus 185 ----~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l~~~~~~--~~~~~~~~~~L~~L~l~~n 257 (520)
T 2z7x_B 185 ----SVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIETTWNSFI--RILQLVWHTTVWYFSISNV 257 (520)
T ss_dssp ----CCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEEEHHHHH--HHHHHHHTSSCSEEEEEEE
T ss_pred ----hhhcccceeeccccccccccccceeecchh-hhccccchhhccccccccCHHHHH--HHHHHhhhCcccEEEeecc
Confidence 34445555555555554 444433 455556666666655554321000 0000001224444444444
Q ss_pred ccccCCCCccccccccccEEEccCCccccCCCCCC-----CCCCCccEEEccCCcccccCC-ccccCc---CCCcceEee
Q 039290 408 PINGILPSSIGNFSISMKSLSMESCNISGGIPKEL-----GNINNLTVIRLGNNELTGTIP-VTLGRL---QKLQGLYLQ 478 (1049)
Q Consensus 408 ~i~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~~-----~~l~~L~~L~Ls~N~l~~~~p-~~~~~l---~~L~~L~L~ 478 (1049)
++ ++.+|..+ .++++|+.+++++|.+ .+| ..+..+ .+|+.|+++
T Consensus 258 ~l-------------------------~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~ 310 (520)
T 2z7x_B 258 KL-------------------------QGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVS 310 (520)
T ss_dssp EE-------------------------ESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEE
T ss_pred cc-------------------------cCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcC
Confidence 44 44445444 6778888888888888 344 455544 678888888
Q ss_pred ccccCCCCCcccccccccceEEeeCcccCCcCchhccCcccCCceeecCccccc--ccCcccccccccccccccCCccCC
Q 039290 479 NNKLEGSIPEDLCHLYRLANLYLGDNKLSGRLPACLGNLTSLRDLSLGSNALTS--IIPSTLWNLKDILRFNLSSNSLNG 556 (1049)
Q Consensus 479 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~ 556 (1049)
+|.+.... .+..+++|++|++++|++++.+|..++++++|++|++++|++++ .+|..+..+++|++|++++|.+++
T Consensus 311 ~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~ 388 (520)
T 2z7x_B 311 GTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSY 388 (520)
T ss_dssp SSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBC
T ss_pred CCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCc
Confidence 88876432 12577888888888888888788888888888888888888886 456778888888889999988888
Q ss_pred CCcc-CcCCCcceeEeecccccccccccccccCCCcccEEEeecccccCCccccccCccCCcEEeccCccccCCcccc-c
Q 039290 557 SLLP-DIGNLKVVIEMDLSLNALSGVIPVTIGGLQGLQLLSLRYNRLQGPIPESFGGLKSLNFVDMSNNNLSGTIPKS-M 634 (1049)
Q Consensus 557 ~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~-~ 634 (1049)
.+|. .+..+++|++|++++|++++..|..+. ++|+.|+|++|+|+ .+|..+..+++|++|+|++|+++ .+|.. +
T Consensus 389 ~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~ 464 (520)
T 2z7x_B 389 DEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIF 464 (520)
T ss_dssp CGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTTTT
T ss_pred ccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHHHh
Confidence 4554 578889999999999999888887765 78999999999999 77887779999999999999999 56665 8
Q ss_pred ccccccceeeccCCcccccCCC
Q 039290 635 EALSYLKHLNLSFNQLEGEIPT 656 (1049)
Q Consensus 635 ~~l~~L~~l~l~~N~l~~~~p~ 656 (1049)
..+++|++|++++|+++|.++.
T Consensus 465 ~~l~~L~~L~l~~N~~~c~c~~ 486 (520)
T 2z7x_B 465 DRLTSLQKIWLHTNPWDCSCPR 486 (520)
T ss_dssp TTCTTCCEEECCSSCBCCCHHH
T ss_pred ccCCcccEEECcCCCCcccCCc
Confidence 9999999999999999998874
No 25
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=6.6e-50 Score=441.99 Aligned_cols=251 Identities=24% Similarity=0.332 Sum_probs=204.9
Q ss_pred hcCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeecccC--CCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEE
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEFD--GSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVL 836 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 836 (1049)
.++|++.+.||+|+||+||+|+. .+|+.||||++..... ...+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm 102 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM 102 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 36899999999999999999995 4799999999976532 23567899999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCC-CccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCc
Q 039290 837 EYMSNGSLEKCLYSDN-YFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEE 915 (1049)
Q Consensus 837 e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~ 915 (1049)
|||+||+|.+++...+ ..+++.+++.|+.||+.||+||| ++|||||||||+|||+++++.+||+|||+|+......
T Consensus 103 Ey~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 179 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV 179 (350)
T ss_dssp ECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH
T ss_pred eCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCCEEEcccccceeecCCc
Confidence 9999999999997644 45789999999999999999999 9999999999999999999999999999998764322
Q ss_pred cccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhccccccc
Q 039290 916 SMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLLN 995 (1049)
Q Consensus 916 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1049)
. .....+||+.|||||++.+..|+.++||||+||++|||++|+.||......+.......+. .
T Consensus 180 ~-~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~--------------~-- 242 (350)
T 4b9d_A 180 E-LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGS--------------F-- 242 (350)
T ss_dssp H-HHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTC--------------C--
T ss_pred c-cccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCC--------------C--
Confidence 2 2334679999999999999999999999999999999999999997632222111111000 0
Q ss_pred ccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 996 CEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 996 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
...+..++.++.+++.+||+.||++|||++|+++|
T Consensus 243 -----~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 243 -----PPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp -----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred -----CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 01112356778999999999999999999999986
No 26
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=2.7e-49 Score=435.26 Aligned_cols=257 Identities=22% Similarity=0.256 Sum_probs=212.4
Q ss_pred hcCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEEec
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVLEY 838 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 838 (1049)
.+.|+..++||+|+||+||+|++ .+|+.||||+++.... ..+|++++++++|||||++++++.+++..|+||||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 131 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence 34577888999999999999996 4799999999976432 24799999999999999999999999999999999
Q ss_pred cCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCC-ceEEecccCceecCCCccc
Q 039290 839 MSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESM-VGHLSDFGIAKILGKEESM 917 (1049)
Q Consensus 839 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~-~~kl~DfGla~~~~~~~~~ 917 (1049)
|+||+|.+++...+ .+++.++..++.||+.||+||| +++||||||||+|||++.+| .+||+|||+|+........
T Consensus 132 ~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~ 207 (336)
T 4g3f_A 132 LEGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG 207 (336)
T ss_dssp CTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC------
T ss_pred cCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcc
Confidence 99999999998654 4899999999999999999999 99999999999999999887 6999999999977543321
Q ss_pred ----cccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhccccc
Q 039290 918 ----RQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANL 993 (1049)
Q Consensus 918 ----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1049)
.....+||+.|||||++.+..|+.++||||+||++|||++|+.||.+....+.......+.
T Consensus 208 ~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~--------------- 272 (336)
T 4g3f_A 208 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEP--------------- 272 (336)
T ss_dssp ------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSC---------------
T ss_pred cceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCC---------------
Confidence 1223579999999999999999999999999999999999999998654443322211100
Q ss_pred ccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhhh
Q 039290 994 LNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETLS 1044 (1049)
Q Consensus 994 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~~ 1044 (1049)
......+..+++++.+++.+||+.||++|||++|+++++.....+..
T Consensus 273 ----~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~ 319 (336)
T 4g3f_A 273 ----PPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVG 319 (336)
T ss_dssp ----CGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred ----CCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhh
Confidence 00011223467789999999999999999999999999998887654
No 27
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.7e-48 Score=470.90 Aligned_cols=465 Identities=19% Similarity=0.238 Sum_probs=327.3
Q ss_pred cceEEeeccccCCCCCCCcccccccceecccccccccccCCCCccccccceEEeccccccccCccccccccceEEEeecc
Q 039290 201 LEGLFISYNQLTGPIPTNLWKCRELHVVSLAFNKFQGGIPRDIGNLTSVRNLFLGNNSLIGEIPNEIGNLRNLEVLGVQS 280 (1049)
Q Consensus 201 L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~ 280 (1049)
|++|++++|++++..|..+..+++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|+++++|++|+|++
T Consensus 28 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~ 107 (549)
T 2z81_A 28 MKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMG 107 (549)
T ss_dssp CCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTT
T ss_pred ccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCC
Confidence 44444444444444444455555555555555555555555566666666666666666655555566666666666666
Q ss_pred ccCCCc-cccccccccccceEEeccCccCCCCCCcccCCCCCccEEEcCCCCCCCCCCccccCCCCCceeecccCccccC
Q 039290 281 SNLAGL-IPASIFNISTLKELAVTDNDLLGSLPSSIDLGLPNLERLFLGENNFSGTIPSSLTNISELSVLDFGFNSFSGL 359 (1049)
Q Consensus 281 n~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 359 (1049)
|++++. +|..+.++++|++|++++|++.+.+|...+..+++|++|++++|++++..|..++.+++|++|++++|.+...
T Consensus 108 n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~ 187 (549)
T 2z81_A 108 NPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFL 187 (549)
T ss_dssp CCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTH
T ss_pred CcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCccccc
Confidence 666542 4455666666666666666655555544444666677777777777666677777777777777777776543
Q ss_pred cccccccccccceeecccccccCCCCCcccccccccCCCCcEEEccCCccccCCCCcccc---ccccccEEEccCCcccc
Q 039290 360 IPTTFGNLRSLKLLSLAGNVLTSPTPDLSFLSSLTSCRNLEIIYLSENPINGILPSSIGN---FSISMKSLSMESCNISG 436 (1049)
Q Consensus 360 ~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~---~~~~L~~L~L~~n~i~~ 436 (1049)
.+..+..+++|++|++++|.+++.+... ......+++|+.|++++|.+++..+..+.. ...+|+.+++++|.+.+
T Consensus 188 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~--~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~ 265 (549)
T 2z81_A 188 LEIFADILSSVRYLELRDTNLARFQFSP--LPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNG 265 (549)
T ss_dssp HHHHHHSTTTBSEEEEESCBCTTCCCCC--CSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEEC
T ss_pred chhhHhhcccccEEEccCCccccccccc--cchhhhhhcccceeccccccchhHHHHHHHHhhhhccccccccccccccc
Confidence 2223345677777777777776643111 112334566777777777766543332211 12367777777777664
Q ss_pred CC------CCCCCCCCCccEEEccCCccccc-----CCccccCcCCCcceEeeccccCCCCCccc-ccccccceEEeeCc
Q 039290 437 GI------PKELGNINNLTVIRLGNNELTGT-----IPVTLGRLQKLQGLYLQNNKLEGSIPEDL-CHLYRLANLYLGDN 504 (1049)
Q Consensus 437 ~~------p~~~~~l~~L~~L~Ls~N~l~~~-----~p~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~L~~N 504 (1049)
.. ...+..+++|+.|++.++.+... ++..+...++|+.|++++|+++ .+|..+ ..+++|++|++++|
T Consensus 266 ~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N 344 (549)
T 2z81_A 266 LGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSEN 344 (549)
T ss_dssp CSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSS
T ss_pred cccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCC
Confidence 31 23456788999999999987632 1222344678999999999998 677766 57999999999999
Q ss_pred ccCCcCch---hccCcccCCceeecCcccccccC--cccccccccccccccCCccCCCCccCcCCCcceeEeeccccccc
Q 039290 505 KLSGRLPA---CLGNLTSLRDLSLGSNALTSIIP--STLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALS 579 (1049)
Q Consensus 505 ~l~~~~p~---~~~~l~~L~~L~L~~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 579 (1049)
++++.+|. .++.+++|++|++++|++++..+ ..+..+++|++|++++|+++. +|..+..+++|++|++++|+++
T Consensus 345 ~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~~~~~~~L~~L~Ls~N~l~ 423 (549)
T 2z81_A 345 LMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFHP-MPDSCQWPEKMRFLNLSSTGIR 423 (549)
T ss_dssp CCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCCC-CCSCCCCCTTCCEEECTTSCCS
T ss_pred ccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCcc-CChhhcccccccEEECCCCCcc
Confidence 99987653 47889999999999999998653 568899999999999999994 7888999999999999999998
Q ss_pred ccccccccCCCcccEEEeecccccCCccccccCccCCcEEeccCccccCCcccccccccccceeeccCCcccccCCCC-C
Q 039290 580 GVIPVTIGGLQGLQLLSLRYNRLQGPIPESFGGLKSLNFVDMSNNNLSGTIPKSMEALSYLKHLNLSFNQLEGEIPTR-G 658 (1049)
Q Consensus 580 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~-~ 658 (1049)
+ +|..+. ++|+.|+|++|+|++.+ ..+++|++|||++|+|+ .+|. ...+++|++|++++|++++.+|.. .
T Consensus 424 ~-l~~~~~--~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~ 494 (549)
T 2z81_A 424 V-VKTCIP--QTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFD 494 (549)
T ss_dssp C-CCTTSC--TTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGG
T ss_pred c-ccchhc--CCceEEECCCCChhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHh
Confidence 4 444432 68999999999999753 57899999999999998 7776 567999999999999999988762 4
Q ss_pred CccccccccccCCccccCCC
Q 039290 659 PFITFSAESFLGNQALCGSP 678 (1049)
Q Consensus 659 ~~~~~~~~~~~~n~~~cg~~ 678 (1049)
.+..+....+.+|++.|+++
T Consensus 495 ~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 495 RLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp GCTTCCEEECCSSCBCCCHH
T ss_pred cCcccCEEEecCCCccCCCc
Confidence 55667778899999998766
No 28
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.7e-49 Score=431.22 Aligned_cols=249 Identities=26% Similarity=0.368 Sum_probs=210.5
Q ss_pred cCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeecc---cCCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEE
Q 039290 761 DGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHME---FDGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVL 836 (1049)
Q Consensus 761 ~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 836 (1049)
++|++.+.||+|+||+||+|+. .+|+.||+|++.+. .....+.+.+|++++++++|||||++++++++++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 4699999999999999999995 47999999999754 2455678999999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCcc
Q 039290 837 EYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEES 916 (1049)
Q Consensus 837 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~~ 916 (1049)
|||+||+|.+++...+ .+++.+++.++.||+.||+||| ++||+||||||+|||++.++.+||+|||+|+.+.....
T Consensus 112 Ey~~gG~L~~~i~~~~-~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~ 187 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 187 (311)
T ss_dssp CCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT
T ss_pred ecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC
Confidence 9999999999998654 4899999999999999999999 99999999999999999999999999999998754332
Q ss_pred -ccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhccccccc
Q 039290 917 -MRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLLN 995 (1049)
Q Consensus 917 -~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1049)
......+||+.|||||++.+..|+.++||||+||++|||++|+.||......+.. .....
T Consensus 188 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~-~~i~~------------------ 248 (311)
T 4aw0_A 188 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIF-AKIIK------------------ 248 (311)
T ss_dssp CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-HHHHH------------------
T ss_pred cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHc------------------
Confidence 2344578999999999999999999999999999999999999999753222111 11110
Q ss_pred ccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 996 CEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 996 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
..+..+...++++.+++.+|++.||++|||++|+..+
T Consensus 249 ---~~~~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~ 285 (311)
T 4aw0_A 249 ---LEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGY 285 (311)
T ss_dssp ---TCCCCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCH
T ss_pred ---CCCCCCcccCHHHHHHHHHHccCCHhHCcChHHHcCC
Confidence 0011122345678999999999999999999987543
No 29
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=7e-49 Score=443.78 Aligned_cols=250 Identities=23% Similarity=0.299 Sum_probs=212.8
Q ss_pred cCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEEecc
Q 039290 761 DGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVLEYM 839 (1049)
Q Consensus 761 ~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 839 (1049)
+.|+..++||+|+||+||+|++. +|+.||||++........+.+.+|++++++++|||||++++++.+++.+|+|||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 46999999999999999999964 79999999998776667788999999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCccccc
Q 039290 840 SNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEESMRQ 919 (1049)
Q Consensus 840 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~~~~~ 919 (1049)
+||+|.+++... .+++.++..++.||+.||+||| ++|||||||||+|||++.+|.+||+|||+|+.+..... ..
T Consensus 231 ~gG~L~~~i~~~--~l~e~~~~~~~~qil~aL~ylH---~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~-~~ 304 (423)
T 4fie_A 231 EGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-RR 304 (423)
T ss_dssp TTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCC-CB
T ss_pred CCCcHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCc-cc
Confidence 999999998764 3899999999999999999999 99999999999999999999999999999998754433 23
Q ss_pred cccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhccccccccccc
Q 039290 920 TKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLLNCEEN 999 (1049)
Q Consensus 920 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 999 (1049)
...+||+.|||||++.+..|+.++||||+||++|||++|+.||.+....+. ...+... ...
T Consensus 305 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~--~~~i~~~-----------------~~~ 365 (423)
T 4fie_A 305 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA--MKMIRDN-----------------LPP 365 (423)
T ss_dssp CCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH--HHHHHHS-----------------CCC
T ss_pred cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH--HHHHHcC-----------------CCC
Confidence 457899999999999999999999999999999999999999975322111 1111000 000
Q ss_pred CchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 1000 DFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 1000 ~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
.......++.++.+|+.+||+.||++|||++|+++|
T Consensus 366 ~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 366 RLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp CCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 111122356778999999999999999999999886
No 30
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.8e-48 Score=467.25 Aligned_cols=452 Identities=19% Similarity=0.206 Sum_probs=348.0
Q ss_pred EEEEeccccccccCCCCCCcchhhhhhcccCccccccCcccccccCCcEeccccCCccccCcccccccCCccEEEeCCCC
Q 039290 77 ALNISYLGLTGTIPPQLGNLSFLAVLAIRNNSFFGSLPEELSHLRGLKYFDFRFNNFHIEIPSWFVSLPRLQHLLLKHNS 156 (1049)
Q Consensus 77 ~l~l~~~~l~g~~~~~~~~l~~L~~L~l~~n~~~g~~p~~~~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~n~ 156 (1049)
.||+++++++ .+|..+. +.|++|+|++|.+++..|..++++++|++|+|++|++++..|..|+++++|++|+|++|+
T Consensus 4 ~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 80 (520)
T 2z7x_B 4 LVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNK 80 (520)
T ss_dssp EEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSC
T ss_pred eEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCc
Confidence 6899999999 7998887 899999999999998888899999999999999999999889999999999999999999
Q ss_pred ccCCCcccccCCCcccEEcCCCccCcc-ccCCCcccccccCCCCccceEEeeccccCCCCCCCccccccc--ceeccccc
Q 039290 157 FVGKIPETIGYLSLLQELDLSDNQLSG-TIPSSIFNISSCQNLPVLEGLFISYNQLTGPIPTNLWKCREL--HVVSLAFN 233 (1049)
Q Consensus 157 l~~~~p~~~~~l~~L~~L~Ls~N~l~g-~ip~~~~~l~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L--~~L~L~~N 233 (1049)
++ .+|.. .+++|++|||++|++++ .+|..+++ +++|++|++++|++++ ..+..+++| +.|++++|
T Consensus 81 l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~------l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n 148 (520)
T 2z7x_B 81 LV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGN------MSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLG 148 (520)
T ss_dssp CC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGG------CTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEEC
T ss_pred ee-ecCcc--ccCCccEEeccCCccccccchhhhcc------CCcceEEEecCcccch---hhccccccceeeEEEeecc
Confidence 99 68877 89999999999999997 57877765 4569999999999986 467778888 99999999
Q ss_pred cc--ccccCCCCcccc-ccceEEeccccccccCcc-ccccccceEEEeecccc-------CCCccccccccccccceEEe
Q 039290 234 KF--QGGIPRDIGNLT-SVRNLFLGNNSLIGEIPN-EIGNLRNLEVLGVQSSN-------LAGLIPASIFNISTLKELAV 302 (1049)
Q Consensus 234 ~l--~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~-~l~~l~~L~~L~L~~n~-------l~~~~p~~~~~l~~L~~L~l 302 (1049)
++ .+..|..+..+. ....+++++|.+.+.+++ .+.++++|+.|++++|. +.+.+| .+..+++|++|++
T Consensus 149 ~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l 227 (520)
T 2z7x_B 149 ETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTL 227 (520)
T ss_dssp TTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEE
T ss_pred cccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhccc
Confidence 99 888999998876 455678899998876665 58889999999999997 777666 7888899999999
Q ss_pred ccCccCCCCCCcccC--CCCCccEEEcCCCCCCCCCCccc-----cCCCCCceeecccCccccCcc-cccccc---cccc
Q 039290 303 TDNDLLGSLPSSIDL--GLPNLERLFLGENNFSGTIPSSL-----TNISELSVLDFGFNSFSGLIP-TTFGNL---RSLK 371 (1049)
Q Consensus 303 ~~N~l~~~~p~~~~~--~l~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~Ls~N~l~~~~p-~~~~~l---~~L~ 371 (1049)
++|++.+..+..+.. ..++|++|++++|+++|.+|..+ +.+++|+.+++++|.+ .+| ..+..+ .+|+
T Consensus 228 ~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~ 305 (520)
T 2z7x_B 228 NNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIK 305 (520)
T ss_dssp EEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCS
T ss_pred cccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCcee
Confidence 988876432222110 13477778888887777777777 6777777777777777 234 344444 4566
Q ss_pred eeecccccccCCCCCcccccccccCCCCcEEEccCCccccCCCCccccccccccEEEccCCccccCCCCCCCCCCCccEE
Q 039290 372 LLSLAGNVLTSPTPDLSFLSSLTSCRNLEIIYLSENPINGILPSSIGNFSISMKSLSMESCNISGGIPKELGNINNLTVI 451 (1049)
Q Consensus 372 ~L~L~~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L 451 (1049)
.|++++|.+..... ...++ +|++|++++|++++.+|..++++++|++|
T Consensus 306 ~L~l~~n~l~~~~~-------~~~l~-------------------------~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 353 (520)
T 2z7x_B 306 NFTVSGTRMVHMLC-------PSKIS-------------------------PFLHLDFSNNLLTDTVFENCGHLTELETL 353 (520)
T ss_dssp EEEEESSCCCCCCC-------CSSCC-------------------------CCCEEECCSSCCCTTTTTTCCCCSSCCEE
T ss_pred EEEcCCCccccccc-------hhhCC-------------------------cccEEEeECCccChhhhhhhccCCCCCEE
Confidence 66666666544321 12334 45555555555555566667777777777
Q ss_pred EccCCcccc--cCCccccCcCCCcceEeeccccCCCCCc-ccccccccceEEeeCcccCCcCchhccCcccCCceeecCc
Q 039290 452 RLGNNELTG--TIPVTLGRLQKLQGLYLQNNKLEGSIPE-DLCHLYRLANLYLGDNKLSGRLPACLGNLTSLRDLSLGSN 528 (1049)
Q Consensus 452 ~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 528 (1049)
+|++|++++ .+|..++.+++|++|+|++|++++.+|. .+..+++|++|++++|++++..|..+. ++|+.|++++|
T Consensus 354 ~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N 431 (520)
T 2z7x_B 354 ILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSN 431 (520)
T ss_dssp ECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSS
T ss_pred EccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCC
Confidence 777777775 4456677777788888888877764554 366777788888888887766666554 67888888888
Q ss_pred ccccccCcccccccccccccccCCccCCCCccCcCCCcceeEeeccccccccc
Q 039290 529 ALTSIIPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALSGV 581 (1049)
Q Consensus 529 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 581 (1049)
+++ .+|..+..+++|++|++++|+++...+..+..+++|++|++++|.++..
T Consensus 432 ~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~ 483 (520)
T 2z7x_B 432 KIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 483 (520)
T ss_dssp CCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred ccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCccc
Confidence 887 4666666788888888888888754444477888888888888888754
No 31
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.6e-48 Score=418.18 Aligned_cols=248 Identities=23% Similarity=0.357 Sum_probs=193.9
Q ss_pred hcCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeeccc---CCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEE
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEF---DGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALV 835 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 835 (1049)
.++|++.+.||+|+||+||+|+. .+|+.||+|++.... ....+.+.+|++++++++|||||++++++.+++..|+|
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 36899999999999999999995 479999999997543 33456899999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCc
Q 039290 836 LEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEE 915 (1049)
Q Consensus 836 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~ 915 (1049)
|||+ +|+|.+++...+ .+++.++..++.||+.|++||| ++||+||||||+|||+++++.+||+|||+|+......
T Consensus 92 mEy~-~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~ 166 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp EECC-CEEHHHHHHHSC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTCCEEECCSSCC-------
T ss_pred EeCC-CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCChHHeEECCCCCEEEeecCCCeecCCCC
Confidence 9999 679999987765 4999999999999999999999 9999999999999999999999999999998764332
Q ss_pred cccccccccccCcccccccCCCCc-CcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhcccccc
Q 039290 916 SMRQTKTLGTIGYMAPEYGREGKV-SRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLL 994 (1049)
Q Consensus 916 ~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1049)
.....+||+.|||||++.+..+ +.++||||+||++|||++|+.||.+....+. ......
T Consensus 167 --~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~-~~~i~~----------------- 226 (275)
T 3hyh_A 167 --FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVL-FKNISN----------------- 226 (275)
T ss_dssp ----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHH-----------------
T ss_pred --ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHH-HHHHHc-----------------
Confidence 2345689999999999988776 5799999999999999999999975322111 111100
Q ss_pred cccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 039290 995 NCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRL 1036 (1049)
Q Consensus 995 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L 1036 (1049)
..+..+...++++.+++.+|++.||++|||++|+++|=
T Consensus 227 ----~~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp 264 (275)
T 3hyh_A 227 ----GVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDD 264 (275)
T ss_dssp ----TCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHCH
T ss_pred ----CCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHcCc
Confidence 00111123456789999999999999999999999873
No 32
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.5e-48 Score=429.35 Aligned_cols=273 Identities=21% Similarity=0.289 Sum_probs=202.6
Q ss_pred CCCCCceecCCCcEEEEEEEeCCCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCceeeEEeeeecCC----eeEEEEe
Q 039290 762 GFSENKLLGMGSFGSVYKGVLPDGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRNLVKIISSCSNND----FKALVLE 837 (1049)
Q Consensus 762 ~~~~~~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~----~~~lv~e 837 (1049)
+|.+.++||+|+||+||+|++ +|+.||||+++.... ......+|+..+.+++|||||++++++.+++ .+++|||
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~E 81 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 81 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEec
Confidence 467788999999999999998 689999999965421 1122334566667889999999999997653 5799999
Q ss_pred ccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHcc-----CCCCeEEcCCCCCCeeecCCCceEEecccCceecC
Q 039290 838 YMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFG-----YSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILG 912 (1049)
Q Consensus 838 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~-----~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~ 912 (1049)
||++|+|.++++.. .+++.++.+++.|+++||+|||.. ++++||||||||+|||++.++.+||+|||+|+...
T Consensus 82 y~~~gsL~~~l~~~--~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~ 159 (303)
T 3hmm_A 82 YHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 159 (303)
T ss_dssp CCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEE
T ss_pred CCCCCcHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcccc
Confidence 99999999999865 489999999999999999999921 12399999999999999999999999999998764
Q ss_pred CCccc---cccccccccCcccccccCCC------CcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccC
Q 039290 913 KEESM---RQTKTLGTIGYMAPEYGREG------KVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSC 983 (1049)
Q Consensus 913 ~~~~~---~~~~~~~~~~y~aPE~~~~~------~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 983 (1049)
..... .....+||+.|||||++.+. .++.++|||||||++|||+||..||......+..+..+.. ...
T Consensus 160 ~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~---~~~ 236 (303)
T 3hmm_A 160 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP---SDP 236 (303)
T ss_dssp TTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSC---SSC
T ss_pred CCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhccc---ccc
Confidence 43321 22345799999999998654 4678999999999999999998887654333322221110 000
Q ss_pred Ccchhc----ccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHh
Q 039290 984 SITEVA----DANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRET 1042 (1049)
Q Consensus 984 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~ 1042 (1049)
....+. +....+..+. .....+++..+.+++.+||+.||++||||+||+++|+++.++
T Consensus 237 ~~~~~~~~~~~~~~rp~~p~-~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 237 SVEEMRKVVCEQKLRPNIPN-RWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp CHHHHHHHHTTSCCCCCCCG-GGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHhcccCCCCCCc-cccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 011111 1111111111 111235677899999999999999999999999999998765
No 33
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=8.7e-49 Score=437.22 Aligned_cols=267 Identities=23% Similarity=0.370 Sum_probs=218.6
Q ss_pred HHHHHHhcCCCCCceecCCCcEEEEEEEeC------CCcEEEEEEeecccC-CCHHHHHHHHHHHhhcCC-CceeeEEee
Q 039290 754 QDLLRATDGFSENKLLGMGSFGSVYKGVLP------DGMEIAAKVFHMEFD-GSLESFHAECKVMGSIRH-RNLVKIISS 825 (1049)
Q Consensus 754 ~~~~~~~~~~~~~~~lg~G~fg~Vy~a~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h-pniv~l~~~ 825 (1049)
++++...++|++.+.||+|+||+||+|++. .++.||||+++.... ...+.+.+|++++.+++| ||||+++|+
T Consensus 57 ~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~ 136 (353)
T 4ase_A 57 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA 136 (353)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred cccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEE
Confidence 344455678999999999999999999853 235799999975432 234678999999999965 999999999
Q ss_pred eec-CCeeEEEEeccCCCChhhhhhcCC---------------CccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCC
Q 039290 826 CSN-NDFKALVLEYMSNGSLEKCLYSDN---------------YFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKP 889 (1049)
Q Consensus 826 ~~~-~~~~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp 889 (1049)
|.+ ++..++|||||++|+|.++++..+ ..+++.++..++.|||+||+||| +++||||||||
T Consensus 137 ~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH---~~~iiHRDLK~ 213 (353)
T 4ase_A 137 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAA 213 (353)
T ss_dssp ECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSG
T ss_pred EEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh---hCCeecCccCc
Confidence 866 457899999999999999997532 35899999999999999999999 99999999999
Q ss_pred CCeeecCCCceEEecccCceecCCCcc-ccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCCcccc
Q 039290 890 SNVLLNESMVGHLSDFGIAKILGKEES-MRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFT-KKKPTDEIFA 967 (1049)
Q Consensus 890 ~NIl~~~~~~~kl~DfGla~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~ 967 (1049)
+|||+++++.+||+|||+|+....... .......||+.|||||++.+..|+.++|||||||++|||+| |+.||.+...
T Consensus 214 ~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~ 293 (353)
T 4ase_A 214 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 293 (353)
T ss_dssp GGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred cceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCH
Confidence 999999999999999999987654332 23345678999999999999999999999999999999998 8999976433
Q ss_pred ccchHHHhhhhccccCCcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhh
Q 039290 968 GEMSLKRWVGDSLLSCSITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETL 1043 (1049)
Q Consensus 968 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~ 1043 (1049)
.+......... .++..+..+++++.++|.+||+.||++||||+|++++|+++.++-
T Consensus 294 ~~~~~~~i~~g--------------------~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~ 349 (353)
T 4ase_A 294 DEEFCRRLKEG--------------------TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 349 (353)
T ss_dssp SHHHHHHHHHT--------------------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcC--------------------CCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHh
Confidence 32222111110 112223446778999999999999999999999999999998754
No 34
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=3.2e-48 Score=419.86 Aligned_cols=245 Identities=24% Similarity=0.379 Sum_probs=198.0
Q ss_pred CCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccC--CCHHHHHHHHHHHhhcCCCceeeEEeeeec----CCeeEEEE
Q 039290 764 SENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFD--GSLESFHAECKVMGSIRHRNLVKIISSCSN----NDFKALVL 836 (1049)
Q Consensus 764 ~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~hpniv~l~~~~~~----~~~~~lv~ 836 (1049)
+..++||+|+||+||+|++. +++.||+|++..... ...+.+.+|++++++++|||||++++++.+ ++.+|+||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 45678999999999999964 688999999975432 235679999999999999999999999865 35689999
Q ss_pred eccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCC--eEEcCCCCCCeeec-CCCceEEecccCceecCC
Q 039290 837 EYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTP--IVHCDIKPSNVLLN-ESMVGHLSDFGIAKILGK 913 (1049)
Q Consensus 837 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~Dlkp~NIl~~-~~~~~kl~DfGla~~~~~ 913 (1049)
|||++|+|.+++...+ .+++..+..++.||+.||+||| +++ ||||||||+|||++ .++.+||+|||+|+....
T Consensus 109 Ey~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~ylH---~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~ 184 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp ECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred eCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence 9999999999997654 5899999999999999999999 887 99999999999998 478999999999985432
Q ss_pred CccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhccccc
Q 039290 914 EESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANL 993 (1049)
Q Consensus 914 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1049)
. .....+||+.|||||++.+ +|+.++||||+||++|||+||+.||.+............. ..
T Consensus 185 ~---~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~-~~------------- 246 (290)
T 3fpq_A 185 S---FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTS-GV------------- 246 (290)
T ss_dssp T---SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTT-TC-------------
T ss_pred C---ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHc-CC-------------
Confidence 2 2345689999999998865 6999999999999999999999999753222111111110 00
Q ss_pred ccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 994 LNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 994 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
.....+..+++++.+++.+||+.||++|||++|+++|
T Consensus 247 -----~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 247 -----KPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp -----CCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred -----CCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0011112244678999999999999999999999876
No 35
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.5e-48 Score=424.34 Aligned_cols=248 Identities=24% Similarity=0.284 Sum_probs=199.2
Q ss_pred cCCCCCceecCCCcEEEEEEEeC----CCcEEEEEEeeccc--CCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEE
Q 039290 761 DGFSENKLLGMGSFGSVYKGVLP----DGMEIAAKVFHMEF--DGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKAL 834 (1049)
Q Consensus 761 ~~~~~~~~lg~G~fg~Vy~a~~~----~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 834 (1049)
++|++.+.||+|+||+||+|+.. +++.||+|+++... .....++.+|++++++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 46999999999999999999852 47789999997543 2234578899999999999999999999999999999
Q ss_pred EEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCC
Q 039290 835 VLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKE 914 (1049)
Q Consensus 835 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~ 914 (1049)
|||||+||+|.+++...+ .+++.++..++.||+.||+||| ++||+||||||+|||++.++.+||+|||+|+.....
T Consensus 104 vmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 179 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 179 (304)
T ss_dssp EECCCTTCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC----
T ss_pred EEEcCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHeEEcCCCCEEecccccceeccCC
Confidence 999999999999998754 4899999999999999999999 999999999999999999999999999999865433
Q ss_pred ccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhcccccc
Q 039290 915 ESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLL 994 (1049)
Q Consensus 915 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1049)
.. .....+||+.|||||++.+..|+.++||||+||++|||+||+.||.+....+..... ..
T Consensus 180 ~~-~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i-~~----------------- 240 (304)
T 3ubd_A 180 EK-KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMI-LK----------------- 240 (304)
T ss_dssp -C-CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH-HH-----------------
T ss_pred Cc-cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHH-Hc-----------------
Confidence 22 234568999999999999999999999999999999999999999763222211111 00
Q ss_pred cccccCchhhHHHHHHHHHHHhhccccCCCCCCCH-----HHHHHH
Q 039290 995 NCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISM-----KDVANR 1035 (1049)
Q Consensus 995 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~-----~ell~~ 1035 (1049)
.....+..+++++.+++.+||+.||++|||+ +|+++|
T Consensus 241 ----~~~~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~H 282 (304)
T 3ubd_A 241 ----AKLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRH 282 (304)
T ss_dssp ----CCCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTS
T ss_pred ----CCCCCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcC
Confidence 0111123356778999999999999999984 677765
No 36
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=4e-46 Score=450.60 Aligned_cols=469 Identities=18% Similarity=0.193 Sum_probs=295.6
Q ss_pred hhhhcccCccccccCcccccccCCcEeccccCCccccCcccccccCCccEEEeCCCCccCCCcccccCCCcccEEcCCCc
Q 039290 100 AVLAIRNNSFFGSLPEELSHLRGLKYFDFRFNNFHIEIPSWFVSLPRLQHLLLKHNSFVGKIPETIGYLSLLQELDLSDN 179 (1049)
Q Consensus 100 ~~L~l~~n~~~g~~p~~~~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N 179 (1049)
+++++++|+++ .+|..+. ++|++|||++|++.+..|..|.++++|++|+|++|++++..|+.|+.+++|++|||++|
T Consensus 34 ~~l~ls~~~L~-~ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 110 (562)
T 3a79_B 34 SMVDYSNRNLT-HVPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHN 110 (562)
T ss_dssp CEEECTTSCCC-SCCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cEEEcCCCCCc-cCCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCC
Confidence 67788888777 4777664 67777888887777766677777777777888777777766777777777777777777
Q ss_pred cCccccCCCcccccccCCCCccceEEeeccccCC-CCCCCcccccccceecccccccccccCCCCcccccc--ceEEecc
Q 039290 180 QLSGTIPSSIFNISSCQNLPVLEGLFISYNQLTG-PIPTNLWKCRELHVVSLAFNKFQGGIPRDIGNLTSV--RNLFLGN 256 (1049)
Q Consensus 180 ~l~g~ip~~~~~l~~l~~l~~L~~L~l~~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L--~~L~L~~ 256 (1049)
+++ .+|.. .+++|++|+|++|++++ .+|..+.++++|++|+|++|++++ ..+..+++| ++|+|++
T Consensus 111 ~l~-~lp~~--------~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~L~~ 178 (562)
T 3a79_B 111 RLQ-NISCC--------PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQ---LDLLPVAHLHLSCILLDL 178 (562)
T ss_dssp CCC-EECSC--------CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCT---TTTGGGTTSCEEEEEEEE
T ss_pred cCC-ccCcc--------ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCcccc---CchhhhhhceeeEEEeec
Confidence 777 66654 24456677777777664 234455555555555555555443 123333333 4444444
Q ss_pred ccc--cccCccccccccceEEEeeccccCCCccccccccccccceEEeccCccCCCCCCcccCCCCCccEEEcCCCCCCC
Q 039290 257 NSL--IGEIPNEIGNLRNLEVLGVQSSNLAGLIPASIFNISTLKELAVTDNDLLGSLPSSIDLGLPNLERLFLGENNFSG 334 (1049)
Q Consensus 257 N~l--~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~ 334 (1049)
|++ ++..|..+..+.. + .+ .+++++|.+.+.++......+++|+.|++++|+..-
T Consensus 179 n~l~~~~~~~~~l~~l~~-~---------------------~l-~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 235 (562)
T 3a79_B 179 VSYHIKGGETESLQIPNT-T---------------------VL-HLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENC 235 (562)
T ss_dssp SSCCCCSSSCCEEEECCE-E---------------------EE-EEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTH
T ss_pred ccccccccCcccccccCc-c---------------------eE-EEEecCccchhhhhhhcccccceEEEeccccccccc
Confidence 444 4444444333320 0 11 234444444443333333333444444444442100
Q ss_pred CCCccccCCCCCceeecccCccccCcccccccccccceeecccccccCCCCCcccccccccCCCCcEEEccCCccccCCC
Q 039290 335 TIPSSLTNISELSVLDFGFNSFSGLIPTTFGNLRSLKLLSLAGNVLTSPTPDLSFLSSLTSCRNLEIIYLSENPINGILP 414 (1049)
Q Consensus 335 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~i~~~~p 414 (1049)
. .+.+. ...+..+++|+.|+++++.+...... ........++|++|++++|.+++.+|
T Consensus 236 ~-------------------~l~~~-~~~l~~l~~L~~L~L~~~~l~~~~~~--~~~~~~~~~~L~~L~l~~n~l~~~ip 293 (562)
T 3a79_B 236 Q-------------------RLMTF-LSELTRGPTLLNVTLQHIETTWKCSV--KLFQFFWPRPVEYLNIYNLTITERID 293 (562)
T ss_dssp H-------------------HHHHH-HHHHHSCSSCEEEEEEEEEECHHHHH--HHHHHHTTSSEEEEEEEEEEECSCCC
T ss_pred c-------------------hHHHH-HHHHhccCcceEEEecCCcCcHHHHH--HHHHhhhcccccEEEEeccEeecccc
Confidence 0 01111 12234444444444444433210000 00000111244444444444443333
Q ss_pred CccccccccccEEEccCCccccCCCCCCCCCCCccEEEccCCcccccCC-ccccCc---CCCcceEeeccccCCCCCccc
Q 039290 415 SSIGNFSISMKSLSMESCNISGGIPKELGNINNLTVIRLGNNELTGTIP-VTLGRL---QKLQGLYLQNNKLEGSIPEDL 490 (1049)
Q Consensus 415 ~~~~~~~~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l---~~L~~L~L~~N~l~~~~~~~~ 490 (1049)
..++... ..+++.|+.++++.|.+ .+| ..+..+ .+|++|++++|.+.... ..
T Consensus 294 ~~~~~~~--------------------~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~ 349 (562)
T 3a79_B 294 REEFTYS--------------------ETALKSLMIEHVKNQVF--LFSKEALYSVFAEMNIKMLSISDTPFIHMV--CP 349 (562)
T ss_dssp CCCCCCC--------------------SCSCCEEEEEEEEECCC--SSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CC
T ss_pred chhhhcc--------------------cccchheehhhccccee--ecChhhhhhhhccCcceEEEccCCCccccc--Cc
Confidence 3221110 15566677777777766 334 233222 56888888888875322 12
Q ss_pred ccccccceEEeeCcccCCcCchhccCcccCCceeecCcccccc--cCcccccccccccccccCCccCCCCc-cCcCCCcc
Q 039290 491 CHLYRLANLYLGDNKLSGRLPACLGNLTSLRDLSLGSNALTSI--IPSTLWNLKDILRFNLSSNSLNGSLL-PDIGNLKV 567 (1049)
Q Consensus 491 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~ 567 (1049)
..+++|++|++++|++++.+|..++++++|++|++++|+++++ +|..+..+++|++|++++|++++.+| ..+..+++
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCccc
Confidence 5778888888888888877888888888888888888888873 35678888888888888888887444 45888899
Q ss_pred eeEeecccccccccccccccCCCcccEEEeecccccCCccccccCccCCcEEeccCccccCCcccc-cccccccceeecc
Q 039290 568 VIEMDLSLNALSGVIPVTIGGLQGLQLLSLRYNRLQGPIPESFGGLKSLNFVDMSNNNLSGTIPKS-MEALSYLKHLNLS 646 (1049)
Q Consensus 568 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~l~l~ 646 (1049)
|++|++++|++++..|..+. ++|+.|+|++|+|+ .+|..+.++++|++|+|++|+++ .+|.. +..+++|+.|+++
T Consensus 430 L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~ 505 (562)
T 3a79_B 430 ILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLH 505 (562)
T ss_dssp CCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECC
T ss_pred CCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEec
Confidence 99999999999887777665 78999999999999 67776779999999999999999 56665 9999999999999
Q ss_pred CCcccccCCC
Q 039290 647 FNQLEGEIPT 656 (1049)
Q Consensus 647 ~N~l~~~~p~ 656 (1049)
+|+|.|.||.
T Consensus 506 ~N~~~c~c~~ 515 (562)
T 3a79_B 506 DNPWDCTCPG 515 (562)
T ss_dssp SCCBCCCHHH
T ss_pred CCCcCCCcch
Confidence 9999999885
No 37
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=2.4e-45 Score=451.99 Aligned_cols=514 Identities=19% Similarity=0.169 Sum_probs=379.7
Q ss_pred CcEEEEEEeccccccccCCCCCCcchhhhhhcccCccccccCcccccccCCcEeccccCCccccCcccccccCCccEEEe
Q 039290 73 RRVTALNISYLGLTGTIPPQLGNLSFLAVLAIRNNSFFGSLPEELSHLRGLKYFDFRFNNFHIEIPSWFVSLPRLQHLLL 152 (1049)
Q Consensus 73 ~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~l~~n~~~g~~p~~~~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L 152 (1049)
..++.|||++|.|++..|.++.++++|++|+|++|++++..|..|++|++|++|+|++|++++..|..|.++++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 36899999999999655668999999999999999999766678999999999999999999877889999999999999
Q ss_pred CCCCccCCCcccccCCCcccEEcCCCccCcc-ccCCCcccccccCCCCccceEEeeccccCCCCCCCcccccccc----e
Q 039290 153 KHNSFVGKIPETIGYLSLLQELDLSDNQLSG-TIPSSIFNISSCQNLPVLEGLFISYNQLTGPIPTNLWKCRELH----V 227 (1049)
Q Consensus 153 ~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g-~ip~~~~~l~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~----~ 227 (1049)
++|++++..|..|+++++|++|+|++|++++ .+|..+.+ ++.|++|++++|++++..|..+..+.+++ .
T Consensus 132 s~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~------l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~ 205 (635)
T 4g8a_A 132 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSN------LTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLS 205 (635)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGG------CTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCE
T ss_pred CCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhcc------chhhhhhcccCccccccccccccchhhhhhhhhh
Confidence 9999997777789999999999999999985 35665544 56699999999999998888888777655 5
Q ss_pred ecccccccccccCCCCccccccceEEeccccccc-cCccccccccceEEEeeccccCC------CccccccccccccceE
Q 039290 228 VSLAFNKFQGGIPRDIGNLTSVRNLFLGNNSLIG-EIPNEIGNLRNLEVLGVQSSNLA------GLIPASIFNISTLKEL 300 (1049)
Q Consensus 228 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~L~~n~l~------~~~p~~~~~l~~L~~L 300 (1049)
++++.|.++...| .......++.+++++|.... ..+..+..+..++...+..+... ...+..+..+..+...
T Consensus 206 ~~ls~n~l~~i~~-~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~ 284 (635)
T 4g8a_A 206 LDLSLNPMNFIQP-GAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIE 284 (635)
T ss_dssp EECTTCCCCEECT-TTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEE
T ss_pred hhcccCcccccCc-ccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhh
Confidence 7889999985544 44455678899999987654 34456888888888877544332 2233444455555555
Q ss_pred EeccCccCCCCCC--cccCCCCCccEEEcCCCCCCCCCCccccCCCCCceeecccCccccCcccccccccccceeecccc
Q 039290 301 AVTDNDLLGSLPS--SIDLGLPNLERLFLGENNFSGTIPSSLTNISELSVLDFGFNSFSGLIPTTFGNLRSLKLLSLAGN 378 (1049)
Q Consensus 301 ~l~~N~l~~~~p~--~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 378 (1049)
.+..+........ ..+..+.+++.+++.+|.+.+.. .+.....|+.|++++|.+.+..+ ..+..|+.+++.+|
T Consensus 285 ~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~--~~~~~~~L~~L~l~~~~~~~~~~---~~l~~L~~l~l~~n 359 (635)
T 4g8a_A 285 EFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVK--DFSYNFGWQHLELVNCKFGQFPT---LKLKSLKRLTFTSN 359 (635)
T ss_dssp EEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECG--GGGSCCCCSEEEEESCEESSCCC---CBCTTCCEEEEESC
T ss_pred hhhhhhhcccccchhhhhhhhccccccccccccccccc--ccccchhhhhhhcccccccCcCc---ccchhhhhcccccc
Confidence 5544432211110 01112345555555555544221 23334455555555555543322 22344555555555
Q ss_pred cccCCCCCcccccccccCCCCcEEEccCCccccCCCCccccccccccEEEccCCccccCCCCCCCCCCCccEEEccCCcc
Q 039290 379 VLTSPTPDLSFLSSLTSCRNLEIIYLSENPINGILPSSIGNFSISMKSLSMESCNISGGIPKELGNINNLTVIRLGNNEL 458 (1049)
Q Consensus 379 ~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l 458 (1049)
.+..... ...+++|+.|++++|.+... +..+..+..+.+|+.++++.|.+
T Consensus 360 ~~~~~~~-------~~~l~~L~~L~ls~n~l~~~-----------------------~~~~~~~~~~~~L~~L~~~~~~~ 409 (635)
T 4g8a_A 360 KGGNAFS-------EVDLPSLEFLDLSRNGLSFK-----------------------GCCSQSDFGTISLKYLDLSFNGV 409 (635)
T ss_dssp CSCCBCC-------CCBCTTCCEEECCSSCCBEE-----------------------EECCHHHHSCSCCCEEECCSCSE
T ss_pred cCCCCcc-------cccccccccchhhccccccc-----------------------cccccchhhhhhhhhhhcccccc
Confidence 4433221 22344455555555444321 22344455667788888888877
Q ss_pred cccCCccccCcCCCcceEeeccccCCCCC-cccccccccceEEeeCcccCCcCchhccCcccCCceeecCccc-ccccCc
Q 039290 459 TGTIPVTLGRLQKLQGLYLQNNKLEGSIP-EDLCHLYRLANLYLGDNKLSGRLPACLGNLTSLRDLSLGSNAL-TSIIPS 536 (1049)
Q Consensus 459 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l-~~~~p~ 536 (1049)
. ..+..+..+++|+.+++++|......+ ..+..+.+++.++++.|.+.+..+..+..++.|+.|++++|++ .+..|.
T Consensus 410 ~-~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~ 488 (635)
T 4g8a_A 410 I-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPD 488 (635)
T ss_dssp E-EECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECS
T ss_pred c-cccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCch
Confidence 7 355667778888888888777665443 4577788888888888888888888888888888899988874 456788
Q ss_pred ccccccccccccccCCccCCCCccCcCCCcceeEeecccccccccccccccCCCcccEEEeecccccCCccccccCc-cC
Q 039290 537 TLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALSGVIPVTIGGLQGLQLLSLRYNRLQGPIPESFGGL-KS 615 (1049)
Q Consensus 537 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l-~~ 615 (1049)
.|..+++|++|+|++|++++..|..|.++++|++|+|++|+|++..|..|.++++|+.|+|++|+|++.+|..|..+ ++
T Consensus 489 ~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~ 568 (635)
T 4g8a_A 489 IFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSS 568 (635)
T ss_dssp CCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTT
T ss_pred hhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCc
Confidence 88889999999999999998888889999999999999999999889999999999999999999999999999998 68
Q ss_pred CcEEeccCccccCC
Q 039290 616 LNFVDMSNNNLSGT 629 (1049)
Q Consensus 616 L~~L~Ls~N~l~~~ 629 (1049)
|++|+|++|++++.
T Consensus 569 L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 569 LAFLNLTQNDFACT 582 (635)
T ss_dssp CCEEECTTCCBCCS
T ss_pred CCEEEeeCCCCccc
Confidence 99999999999864
No 38
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=2.2e-46 Score=409.66 Aligned_cols=249 Identities=22% Similarity=0.353 Sum_probs=190.3
Q ss_pred cCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeecccC-CCHHHHHHHHHHHhhcCCCceeeEEeeeecCC--------
Q 039290 761 DGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEFD-GSLESFHAECKVMGSIRHRNLVKIISSCSNND-------- 830 (1049)
Q Consensus 761 ~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~-------- 830 (1049)
++|++.+.||+|+||+||+|+. .+|+.||||+++.... ...+.+.+|++++++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 4588999999999999999996 4799999999976543 23467899999999999999999999986543
Q ss_pred ----eeEEEEeccCCCChhhhhhcCCC--ccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEec
Q 039290 831 ----FKALVLEYMSNGSLEKCLYSDNY--FLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSD 904 (1049)
Q Consensus 831 ----~~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~D 904 (1049)
..|+|||||++|+|.+++..... ..++..++.++.||++||+||| ++||+||||||+|||++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH---~~~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHH---HCcCccccCcHHHeEECCCCcEEEcc
Confidence 36899999999999999976543 3456778899999999999999 99999999999999999999999999
Q ss_pred ccCceecCCCcc-----------ccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHH
Q 039290 905 FGIAKILGKEES-----------MRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLK 973 (1049)
Q Consensus 905 fGla~~~~~~~~-----------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~ 973 (1049)
||+|+....... ......+||+.|||||++.+..|+.++||||+||++|||++ ||...... ..
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~---~~ 235 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMER---VR 235 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHH---HH
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHH---HH
Confidence 999987654321 12234579999999999999999999999999999999996 77542111 11
Q ss_pred HhhhhccccCCcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 974 RWVGDSLLSCSITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 974 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
.... +.. ...++......+...+++.+||+.||++|||+.|+++|
T Consensus 236 ~~~~----------~~~-------~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 236 TLTD----------VRN-------LKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp HHHH----------HHT-------TCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHH----------Hhc-------CCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1000 000 00112223445567889999999999999999999875
No 39
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=6.8e-45 Score=439.76 Aligned_cols=453 Identities=19% Similarity=0.205 Sum_probs=328.1
Q ss_pred EEEEEeccccccccCCCCCCcchhhhhhcccCccccccCcccccccCCcEeccccCCccccCcccccccCCccEEEeCCC
Q 039290 76 TALNISYLGLTGTIPPQLGNLSFLAVLAIRNNSFFGSLPEELSHLRGLKYFDFRFNNFHIEIPSWFVSLPRLQHLLLKHN 155 (1049)
Q Consensus 76 ~~l~l~~~~l~g~~~~~~~~l~~L~~L~l~~n~~~g~~p~~~~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~n 155 (1049)
..+|+++++++ .+|..+. +.|++|+|++|.+++..|..++++++|++|+|++|++++..|..|+++++|++|||++|
T Consensus 34 ~~l~ls~~~L~-~ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 110 (562)
T 3a79_B 34 SMVDYSNRNLT-HVPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHN 110 (562)
T ss_dssp CEEECTTSCCC-SCCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cEEEcCCCCCc-cCCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCC
Confidence 67899999999 5998775 79999999999999877789999999999999999999999999999999999999999
Q ss_pred CccCCCcccccCCCcccEEcCCCccCcc-ccCCCcccccccCCCCccceEEeeccccCCCCCCCccccccc--ceecccc
Q 039290 156 SFVGKIPETIGYLSLLQELDLSDNQLSG-TIPSSIFNISSCQNLPVLEGLFISYNQLTGPIPTNLWKCREL--HVVSLAF 232 (1049)
Q Consensus 156 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~g-~ip~~~~~l~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L--~~L~L~~ 232 (1049)
.++ .+|.. .+++|++|||++|++++ .+|..+.+ +++|++|++++|++++ ..+..+++| +.|++++
T Consensus 111 ~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~------l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~L~~ 178 (562)
T 3a79_B 111 RLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGN------LTKLTFLGLSAAKFRQ---LDLLPVAHLHLSCILLDL 178 (562)
T ss_dssp CCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGG------CTTCCEEEEECSBCCT---TTTGGGTTSCEEEEEEEE
T ss_pred cCC-ccCcc--ccccCCEEECCCCCccccCchHhhcc------cCcccEEecCCCcccc---CchhhhhhceeeEEEeec
Confidence 999 78877 89999999999999995 44566654 5569999999999986 345566666 9999999
Q ss_pred ccc--ccccCCCCcccc-ccceEEeccccccccCcc-ccccccceEEEeeccccC-----CCccccccccccccceEEec
Q 039290 233 NKF--QGGIPRDIGNLT-SVRNLFLGNNSLIGEIPN-EIGNLRNLEVLGVQSSNL-----AGLIPASIFNISTLKELAVT 303 (1049)
Q Consensus 233 N~l--~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~-~l~~l~~L~~L~L~~n~l-----~~~~p~~~~~l~~L~~L~l~ 303 (1049)
|++ ++..|..+..+. ..-.+++++|.+.+.+++ .+.++++|+.|++++|+. .+. +..+..+++|+.|+++
T Consensus 179 n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~-~~~l~~l~~L~~L~L~ 257 (562)
T 3a79_B 179 VSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTF-LSELTRGPTLLNVTLQ 257 (562)
T ss_dssp SSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHH-HHHHHSCSSCEEEEEE
T ss_pred ccccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHH-HHHHhccCcceEEEec
Confidence 999 889999988865 233668999999887765 477899999999999852 222 3456777888888888
Q ss_pred cCccCCC----CCCcccCCCCCccEEEcCCCCCCCCCCccc-----cCCCCCceeecccCccccCcc-cccccc---ccc
Q 039290 304 DNDLLGS----LPSSIDLGLPNLERLFLGENNFSGTIPSSL-----TNISELSVLDFGFNSFSGLIP-TTFGNL---RSL 370 (1049)
Q Consensus 304 ~N~l~~~----~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~Ls~N~l~~~~p-~~~~~l---~~L 370 (1049)
++.+.+. ++... ..++|++|++++|+++|.+|..+ .+++.|+.++++.|.+ .+| ..+..+ .+|
T Consensus 258 ~~~l~~~~~~~~~~~~--~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~~L 333 (562)
T 3a79_B 258 HIETTWKCSVKLFQFF--WPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSVFAEMNI 333 (562)
T ss_dssp EEEECHHHHHHHHHHH--TTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHHHHTCCC
T ss_pred CCcCcHHHHHHHHHhh--hcccccEEEEeccEeeccccchhhhcccccchheehhhccccee--ecChhhhhhhhccCcc
Confidence 7766532 11111 12467777777777777677665 5566666666666655 223 222222 345
Q ss_pred ceeecccccccCCCCCcccccccccCCCCcEEEccCCccccCCCCccccccccccEEEccCCccccCCCCCCCCCCCccE
Q 039290 371 KLLSLAGNVLTSPTPDLSFLSSLTSCRNLEIIYLSENPINGILPSSIGNFSISMKSLSMESCNISGGIPKELGNINNLTV 450 (1049)
Q Consensus 371 ~~L~L~~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~~~~l~~L~~ 450 (1049)
++|++++|.+..... ...++ +|++|++++|++++.+|..+.++++|++
T Consensus 334 ~~L~l~~n~~~~~~~-------~~~l~-------------------------~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 381 (562)
T 3a79_B 334 KMLSISDTPFIHMVC-------PPSPS-------------------------SFTFLNFTQNVFTDSVFQGCSTLKRLQT 381 (562)
T ss_dssp SEEEEESSCCCCCCC-------CSSCC-------------------------CCCEEECCSSCCCTTTTTTCCSCSSCCE
T ss_pred eEEEccCCCcccccC-------ccCCC-------------------------CceEEECCCCccccchhhhhcccCCCCE
Confidence 555555555433210 12233 5555555556665566666777777777
Q ss_pred EEccCCccccc--CCccccCcCCCcceEeeccccCCCCCc-ccccccccceEEeeCcccCCcCchhccCcccCCceeecC
Q 039290 451 IRLGNNELTGT--IPVTLGRLQKLQGLYLQNNKLEGSIPE-DLCHLYRLANLYLGDNKLSGRLPACLGNLTSLRDLSLGS 527 (1049)
Q Consensus 451 L~Ls~N~l~~~--~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 527 (1049)
|+|++|++++. +|..++.+++|++|+|++|++++.+|. .+..+++|++|++++|++++.+|..+. ++|++|+|++
T Consensus 382 L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~ 459 (562)
T 3a79_B 382 LILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHN 459 (562)
T ss_dssp EECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCS
T ss_pred EECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCC
Confidence 77777777752 235567777777777777777764444 466677777777777777766655443 5777777777
Q ss_pred cccccccCcccccccccccccccCCccCCCCccCcCCCcceeEeeccccccccccc
Q 039290 528 NALTSIIPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALSGVIP 583 (1049)
Q Consensus 528 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 583 (1049)
|+++. +|..+..+++|++|+|++|+++...+..+..+++|++|++++|.+.+..+
T Consensus 460 N~l~~-ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 460 NRIMS-IPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp SCCCC-CCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCCCHH
T ss_pred CcCcc-cChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCCCcc
Confidence 77774 55555577777777777777775333347777788888888887775433
No 40
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=5.9e-45 Score=405.08 Aligned_cols=277 Identities=30% Similarity=0.532 Sum_probs=225.4
Q ss_pred cCChhhHHHHHHHHHhcccCCCCcccccCCCCCCCce--eeeEEEcCCC--CcEEEEEEecccccc--ccCCCCCCcchh
Q 039290 26 TNVTTDQFALLALKEHIKHDPSNLLANNWSTTSSVCS--WIGVTCGVRN--RRVTALNISYLGLTG--TIPPQLGNLSFL 99 (1049)
Q Consensus 26 ~~~~~d~~all~~k~~~~~~~~~~l~~~w~~~~~~c~--w~gv~c~~~~--~~v~~l~l~~~~l~g--~~~~~~~~l~~L 99 (1049)
.|.++|++||++||+++. ||. .+ ++|..+++||. |.||+|+..+ ++|+.|+|+++++.| .+|+.++++++|
T Consensus 2 ~c~~~~~~aL~~~k~~~~-~~~-~l-~~W~~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L 78 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLG-NPT-TL-SSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYL 78 (313)
T ss_dssp CSCHHHHHHHHHHHHHTT-CCG-GG-TTCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTC
T ss_pred CCCHHHHHHHHHHHHhcC-Ccc-cc-cCCCCCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCC
Confidence 589999999999999994 776 45 58988889998 9999998655 899999999999999 899999999999
Q ss_pred hhhhccc-CccccccCcccccccCCcEeccccCCccccCcccccccCCccEEEeCCCCccCCCcccccCCCcccEEcCCC
Q 039290 100 AVLAIRN-NSFFGSLPEELSHLRGLKYFDFRFNNFHIEIPSWFVSLPRLQHLLLKHNSFVGKIPETIGYLSLLQELDLSD 178 (1049)
Q Consensus 100 ~~L~l~~-n~~~g~~p~~~~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~ 178 (1049)
++|+|++ |.+.|.+|..++++++|++|+|++|++++.+|..|.++++|++|+|++|.+++.+|..++.+++|++|+|++
T Consensus 79 ~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 158 (313)
T 1ogq_A 79 NFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDG 158 (313)
T ss_dssp SEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCS
T ss_pred CeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcC
Confidence 9999994 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCccccCCCcccccccCCCCccceEEeeccccCCCCCCCcccccccceecccccccccccCCCCccccccceEEecccc
Q 039290 179 NQLSGTIPSSIFNISSCQNLPVLEGLFISYNQLTGPIPTNLWKCRELHVVSLAFNKFQGGIPRDIGNLTSVRNLFLGNNS 258 (1049)
Q Consensus 179 N~l~g~ip~~~~~l~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 258 (1049)
|+++|.+|..++++. +.|++|++++|++++.+|..+..++ |++|++++|++++.+|..|+.+++|++|+|++|+
T Consensus 159 N~l~~~~p~~l~~l~-----~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 232 (313)
T 1ogq_A 159 NRISGAIPDSYGSFS-----KLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNS 232 (313)
T ss_dssp SCCEEECCGGGGCCC-----TTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSE
T ss_pred CcccCcCCHHHhhhh-----hcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCc
Confidence 999988998876543 1578888888888887887777776 7777777777777777777777777777777777
Q ss_pred ccccCccccccccceEEEeeccccCCCccccccccccccceEEeccCccCCCCC
Q 039290 259 LIGEIPNEIGNLRNLEVLGVQSSNLAGLIPASIFNISTLKELAVTDNDLLGSLP 312 (1049)
Q Consensus 259 l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 312 (1049)
+++.+|. +..+++|++|+|++|++++.+|..+..+++|++|++++|+++|.+|
T Consensus 233 l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip 285 (313)
T 1ogq_A 233 LAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285 (313)
T ss_dssp ECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECC
T ss_pred eeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCC
Confidence 7655554 6666666666666666666666555555555555555554444444
No 41
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.3e-44 Score=411.04 Aligned_cols=270 Identities=21% Similarity=0.241 Sum_probs=203.0
Q ss_pred cCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeecccCC--CHHHHHHHHHHHhhcCCCceeeEEeeeec------CCe
Q 039290 761 DGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEFDG--SLESFHAECKVMGSIRHRNLVKIISSCSN------NDF 831 (1049)
Q Consensus 761 ~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~hpniv~l~~~~~~------~~~ 831 (1049)
++|++.+.||+|+||+||+|++ .+|+.||||+++..... ..+.+.+|++++++++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 5799999999999999999996 47999999999754422 34678899999999999999999998753 367
Q ss_pred eEEEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceec
Q 039290 832 KALVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKIL 911 (1049)
Q Consensus 832 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~ 911 (1049)
.|+|||||+ |+|.+++...+ .+++.++..++.||+.||+||| ++|||||||||+|||++.++.+||+|||+|+.+
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~-~l~~~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~ 208 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQ-PLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGL 208 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC
T ss_pred EEEEEeCCC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCcCcCCCcCccccccCCCCCEEEeecceeeec
Confidence 899999996 68999987654 5999999999999999999999 999999999999999999999999999999876
Q ss_pred CCCc---cccccccccccCcccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCC-cc
Q 039290 912 GKEE---SMRQTKTLGTIGYMAPEYGREG-KVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCS-IT 986 (1049)
Q Consensus 912 ~~~~---~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~ 986 (1049)
.... .......+||+.|||||++.+. .++.++||||+||++|||++|+.||.+....+............... ..
T Consensus 209 ~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~ 288 (398)
T 4b99_A 209 CTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQ 288 (398)
T ss_dssp -------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC
T ss_pred ccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhh
Confidence 4322 2233457899999999998764 56999999999999999999999997633222111111000000000 00
Q ss_pred hhccc----cccccccc---Cc-hhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 987 EVADA----NLLNCEEN---DF-SAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 987 ~~~~~----~~~~~~~~---~~-~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
..... .....+.. .+ ......+.++.+|+.+||+.||++|||++|+++|
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 289 AVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp -----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred hhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 00000 00000000 00 0112345678999999999999999999999986
No 42
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=4.7e-44 Score=402.25 Aligned_cols=269 Identities=20% Similarity=0.264 Sum_probs=201.2
Q ss_pred HHhcCCCCCceecCCCcEEEEEEEeC----CCcEEEEEEeecccCCCHHHHHHHHHHHhhc-CCCceeeEEeeeecCCee
Q 039290 758 RATDGFSENKLLGMGSFGSVYKGVLP----DGMEIAAKVFHMEFDGSLESFHAECKVMGSI-RHRNLVKIISSCSNNDFK 832 (1049)
Q Consensus 758 ~~~~~~~~~~~lg~G~fg~Vy~a~~~----~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~ 832 (1049)
...++|++.++||+|+||+||+|+.+ +++.||+|++... ....++.+|+++++.+ +|||||++++++.+.++.
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~--~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~ 95 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT--SHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV 95 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT--SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEE
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc--cCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEE
Confidence 34578999999999999999999842 4678999998654 3456788999999998 699999999999999999
Q ss_pred EEEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCC-CceEEecccCceec
Q 039290 833 ALVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNES-MVGHLSDFGIAKIL 911 (1049)
Q Consensus 833 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~-~~~kl~DfGla~~~ 911 (1049)
|+||||+++|+|.+++. .+++.+++.++.|++.||+||| ++||+||||||+|||++.+ +.+||+|||+|+..
T Consensus 96 ~lvmE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~ylH---~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~ 168 (361)
T 4f9c_A 96 VIAMPYLEHESFLDILN----SLSFQEVREYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGT 168 (361)
T ss_dssp EEEEECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EEEEeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCcCCHHHeEEeCCCCeEEECcCCCCccc
Confidence 99999999999999884 3889999999999999999999 9999999999999999876 79999999999865
Q ss_pred CCCcc---------------------------ccccccccccCcccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCC
Q 039290 912 GKEES---------------------------MRQTKTLGTIGYMAPEYGREG-KVSRKCDVYSYGIMLMETFTKKKPTD 963 (1049)
Q Consensus 912 ~~~~~---------------------------~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~ 963 (1049)
..... ......+||+.|||||++.+. .++.++||||+||++|||++|+.||.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~ 248 (361)
T 4f9c_A 169 HDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFY 248 (361)
T ss_dssp TTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSS
T ss_pred CCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCC
Confidence 43211 112345799999999998775 58999999999999999999999996
Q ss_pred ccccccchHHHhhh------------hcc----cc-----CCcchhccc---------cccccc---ccCchhhHHHHHH
Q 039290 964 EIFAGEMSLKRWVG------------DSL----LS-----CSITEVADA---------NLLNCE---ENDFSAREQCVSS 1010 (1049)
Q Consensus 964 ~~~~~~~~~~~~~~------------~~~----~~-----~~~~~~~~~---------~~~~~~---~~~~~~~~~~~~~ 1010 (1049)
.............. ... .. ......... ...... ..........+++
T Consensus 249 ~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~ 328 (361)
T 4f9c_A 249 KASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDE 328 (361)
T ss_dssp CCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHH
T ss_pred CCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHH
Confidence 43322111111100 000 00 000000000 000000 0000111234567
Q ss_pred HHHHHhhccccCCCCCCCHHHHHHH
Q 039290 1011 IFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 1011 l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
+.+|+.+|++.||++|||++|+++|
T Consensus 329 a~DLl~~lL~~dP~~R~ta~eaL~H 353 (361)
T 4f9c_A 329 AYDLLDKLLDLNPASRITAEEALLH 353 (361)
T ss_dssp HHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred HHHHHHHHCcCChhHCcCHHHHhcC
Confidence 8999999999999999999999986
No 43
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=7.4e-43 Score=407.53 Aligned_cols=424 Identities=20% Similarity=0.265 Sum_probs=245.9
Q ss_pred CcEEEEEEeccccccccCCCCCCcchhhhhhcccCccccccCcccccccCCcEeccccCCccccCcccccccCCccEEEe
Q 039290 73 RRVTALNISYLGLTGTIPPQLGNLSFLAVLAIRNNSFFGSLPEELSHLRGLKYFDFRFNNFHIEIPSWFVSLPRLQHLLL 152 (1049)
Q Consensus 73 ~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~l~~n~~~g~~p~~~~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L 152 (1049)
.++..|+++++.+ |++|++++++++|++|++++|.+.|.+|.+++++++|+.++++.+.. .+|++|++
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~-----------~~l~~L~l 78 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD-----------RQAHELEL 78 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH-----------HTCSEEEC
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc-----------cCCCEEEe
Confidence 4567777777777 67887788888888888888887777888777777775555554421 34677788
Q ss_pred CCCCccCCCcccccCCCcccEEcCCCccCccccCCCcccccccCCCCccceEEeeccccCCCCCCCcccccccceecccc
Q 039290 153 KHNSFVGKIPETIGYLSLLQELDLSDNQLSGTIPSSIFNISSCQNLPVLEGLFISYNQLTGPIPTNLWKCRELHVVSLAF 232 (1049)
Q Consensus 153 ~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~ 232 (1049)
++|.+++ +|.. .++|++|++++|++++ +|..+ ++|++|++++|++++ +|.. .++|++|++++
T Consensus 79 ~~~~l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~~---------~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~ 140 (454)
T 1jl5_A 79 NNLGLSS-LPEL---PPHLESLVASCNSLTE-LPELP---------QSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSN 140 (454)
T ss_dssp TTSCCSC-CCSC---CTTCSEEECCSSCCSS-CCCCC---------TTCCEEECCSSCCSC-CCSC---CTTCCEEECCS
T ss_pred cCCcccc-CCCC---cCCCCEEEccCCcCCc-ccccc---------CCCcEEECCCCccCc-ccCC---CCCCCEEECcC
Confidence 8777774 4442 3677788888887775 66432 347777888887774 3332 15777888888
Q ss_pred cccccccCCCCccccccceEEeccccccccCccccccccceEEEeeccccCCCccccccccccccceEEeccCccCCCCC
Q 039290 233 NKFQGGIPRDIGNLTSVRNLFLGNNSLIGEIPNEIGNLRNLEVLGVQSSNLAGLIPASIFNISTLKELAVTDNDLLGSLP 312 (1049)
Q Consensus 233 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 312 (1049)
|++++ +| +|+++++|++|++++|++++ +|..+ .+|++|++++|++.+ +| .+.++++|++|++++|++.+ +|
T Consensus 141 n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~ 211 (454)
T 1jl5_A 141 NQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LP 211 (454)
T ss_dssp SCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CC
T ss_pred CCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CC
Confidence 88775 66 57788888888888888774 55543 477888888888777 45 57778888888888888774 55
Q ss_pred CcccCCCCCccEEEcCCCCCCCCCCccccCCCCCceeecccCccccCcccccccccccceeecccccccCCCCCcccccc
Q 039290 313 SSIDLGLPNLERLFLGENNFSGTIPSSLTNISELSVLDFGFNSFSGLIPTTFGNLRSLKLLSLAGNVLTSPTPDLSFLSS 392 (1049)
Q Consensus 313 ~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~ 392 (1049)
.. .++|++|++++|+++ .+|. ++.+++|++|++++|++++ +|.. +++|+.|++++|.+++++..
T Consensus 212 ~~----~~~L~~L~l~~n~l~-~lp~-~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~l~~~------ 275 (454)
T 1jl5_A 212 DL----PLSLESIVAGNNILE-ELPE-LQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTDLPEL------ 275 (454)
T ss_dssp CC----CTTCCEEECCSSCCS-SCCC-CTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSCCCCC------
T ss_pred CC----cCcccEEECcCCcCC-cccc-cCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccccCcc------
Confidence 42 247888888888887 5663 7788888888888888876 3432 36788888888888775532
Q ss_pred cccCCCCcEEEccCCccccCCCCccccccccccEEEccCCccccCCCCCCCCC-CCccEEEccCCcccccCCccccCcCC
Q 039290 393 LTSCRNLEIIYLSENPINGILPSSIGNFSISMKSLSMESCNISGGIPKELGNI-NNLTVIRLGNNELTGTIPVTLGRLQK 471 (1049)
Q Consensus 393 l~~l~~L~~L~Ls~N~i~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~ 471 (1049)
+++|+.|++++|++++.. ..+.+|+.|++++|++++ ++ .+ ++|++|++++|++++ +|.. +++
T Consensus 276 ---~~~L~~L~ls~N~l~~l~-----~~~~~L~~L~l~~N~l~~-i~----~~~~~L~~L~Ls~N~l~~-lp~~---~~~ 338 (454)
T 1jl5_A 276 ---PQSLTFLDVSENIFSGLS-----ELPPNLYYLNASSNEIRS-LC----DLPPSLEELNVSNNKLIE-LPAL---PPR 338 (454)
T ss_dssp ---CTTCCEEECCSSCCSEES-----CCCTTCCEEECCSSCCSE-EC----CCCTTCCEEECCSSCCSC-CCCC---CTT
T ss_pred ---cCcCCEEECcCCccCccc-----CcCCcCCEEECcCCcCCc-cc----CCcCcCCEEECCCCcccc-cccc---CCc
Confidence 267888888888887631 122478888888888875 22 22 478888888888885 5544 477
Q ss_pred CcceEeeccccCCCCCcccccccccceEEeeCcccCC--cCchhccCcccCCceeecCcccccccCcccccccccccccc
Q 039290 472 LQGLYLQNNKLEGSIPEDLCHLYRLANLYLGDNKLSG--RLPACLGNLTSLRDLSLGSNALTSIIPSTLWNLKDILRFNL 549 (1049)
Q Consensus 472 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 549 (1049)
|++|++++|+++ .+|. .+++|++|++++|++++ .+|..++. |+.|.+.+.+|.. +++|+.|++
T Consensus 339 L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~--------L~~n~~~~~i~~~---~~~L~~L~l 403 (454)
T 1jl5_A 339 LERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIPESVED--------LRMNSHLAEVPEL---PQNLKQLHV 403 (454)
T ss_dssp CCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCCTTCCE--------EECCC--------------------
T ss_pred CCEEECCCCccc-cccc---hhhhccEEECCCCCCCcCCCChHHHHh--------hhhcccccccccc---cCcCCEEEC
Confidence 888888888888 4555 46788888888888887 56655543 2346666666653 467888888
Q ss_pred cCCccCC--CCccCcCCCcceeEeecccccccccccccccCC
Q 039290 550 SSNSLNG--SLLPDIGNLKVVIEMDLSLNALSGVIPVTIGGL 589 (1049)
Q Consensus 550 s~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 589 (1049)
++|++++ .+|. .++.|.+++|.+.+..+.+....
T Consensus 404 s~N~l~~~~~iP~------sl~~L~~~~~~~~~~~~~~~~~~ 439 (454)
T 1jl5_A 404 ETNPLREFPDIPE------SVEDLRMNSERVVDPYEFAHETT 439 (454)
T ss_dssp ------------------------------------------
T ss_pred CCCcCCccccchh------hHhheeCcCcccCCccccCHHHh
Confidence 8888886 4443 45667788888877666554443
No 44
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=2.9e-42 Score=402.50 Aligned_cols=400 Identities=23% Similarity=0.317 Sum_probs=287.7
Q ss_pred cEEEEEEeccccccccCCCCCCcchhhhhhcccCccccccCcccccccCCcEeccccCCccccCcccccccCCccEEEeC
Q 039290 74 RVTALNISYLGLTGTIPPQLGNLSFLAVLAIRNNSFFGSLPEELSHLRGLKYFDFRFNNFHIEIPSWFVSLPRLQHLLLK 153 (1049)
Q Consensus 74 ~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~l~~n~~~g~~p~~~~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~ 153 (1049)
++..|+++++.+.|.+|++++++..|+.++++.+.. .+|++|++++|++++ +|.. .++|++|+++
T Consensus 35 ~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~-----------~~l~~L~l~~~~l~~-lp~~---~~~L~~L~l~ 99 (454)
T 1jl5_A 35 SKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD-----------RQAHELELNNLGLSS-LPEL---PPHLESLVAS 99 (454)
T ss_dssp CHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH-----------HTCSEEECTTSCCSC-CCSC---CTTCSEEECC
T ss_pred chhhhhccCCcccccCCcccccchhcchhhhhhhhc-----------cCCCEEEecCCcccc-CCCC---cCCCCEEEcc
Confidence 566788999999999999999999999999887753 568999999999985 5552 3789999999
Q ss_pred CCCccCCCcccccCCCcccEEcCCCccCccccCCCcccccccCCCCccceEEeeccccCCCCCCCcccccccceeccccc
Q 039290 154 HNSFVGKIPETIGYLSLLQELDLSDNQLSGTIPSSIFNISSCQNLPVLEGLFISYNQLTGPIPTNLWKCRELHVVSLAFN 233 (1049)
Q Consensus 154 ~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N 233 (1049)
+|.+++ +|+. +++|++|++++|+++ .+|... ++|++|++++|++++ +| .+..+++|++|++++|
T Consensus 100 ~n~l~~-lp~~---~~~L~~L~l~~n~l~-~l~~~~---------~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N 163 (454)
T 1jl5_A 100 CNSLTE-LPEL---PQSLKSLLVDNNNLK-ALSDLP---------PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNN 163 (454)
T ss_dssp SSCCSS-CCCC---CTTCCEEECCSSCCS-CCCSCC---------TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSS
T ss_pred CCcCCc-cccc---cCCCcEEECCCCccC-cccCCC---------CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCC
Confidence 999996 7764 478999999999998 455321 468999999999996 88 5999999999999999
Q ss_pred ccccccCCCCccccccceEEeccccccccCccccccccceEEEeeccccCCCccccccccccccceEEeccCccCCCCCC
Q 039290 234 KFQGGIPRDIGNLTSVRNLFLGNNSLIGEIPNEIGNLRNLEVLGVQSSNLAGLIPASIFNISTLKELAVTDNDLLGSLPS 313 (1049)
Q Consensus 234 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 313 (1049)
++++ +|..+ .+|++|++++|++++ +| .++++++|+.|++++|++++ +|... ++|++|++++|++. .+|.
T Consensus 164 ~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp~ 232 (454)
T 1jl5_A 164 SLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGNNILE-ELPE 232 (454)
T ss_dssp CCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCSSCCS-SCCC
T ss_pred cCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEECcCCcCC-cccc
Confidence 9986 67654 489999999999996 66 69999999999999999987 34432 58999999999998 7885
Q ss_pred cccCCCCCccEEEcCCCCCCCCCCccccCCCCCceeecccCccccCcccccccccccceeecccccccCCCCCccccccc
Q 039290 314 SIDLGLPNLERLFLGENNFSGTIPSSLTNISELSVLDFGFNSFSGLIPTTFGNLRSLKLLSLAGNVLTSPTPDLSFLSSL 393 (1049)
Q Consensus 314 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~l 393 (1049)
+..+++|++|++++|++++ +|.. +++|+.|++++|++++ +|.. +++|++|++++|.+++++..
T Consensus 233 --~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l~~~------- 295 (454)
T 1jl5_A 233 --LQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGLSEL------- 295 (454)
T ss_dssp --CTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEESCC-------
T ss_pred --cCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcccCc-------
Confidence 4479999999999999985 5543 4789999999999997 4543 37899999999999875421
Q ss_pred ccCCCCcEEEccCCccccCCCCccccccccccEEEccCCccccCCCCCCCCCCCccEEEccCCcccccCCccccCcCCCc
Q 039290 394 TSCRNLEIIYLSENPINGILPSSIGNFSISMKSLSMESCNISGGIPKELGNINNLTVIRLGNNELTGTIPVTLGRLQKLQ 473 (1049)
Q Consensus 394 ~~l~~L~~L~Ls~N~i~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 473 (1049)
.++|+.|++++|+++++ ...+.+|++|++++|++++ +|.. +++|++|++++|++++ +|. .+++|+
T Consensus 296 --~~~L~~L~l~~N~l~~i-----~~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~-lp~---~l~~L~ 360 (454)
T 1jl5_A 296 --PPNLYYLNASSNEIRSL-----CDLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAE-VPE---LPQNLK 360 (454)
T ss_dssp --CTTCCEEECCSSCCSEE-----CCCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCC
T ss_pred --CCcCCEEECcCCcCCcc-----cCCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCcccc-ccc---hhhhcc
Confidence 26899999999999863 2333589999999999996 6654 5899999999999994 666 478999
Q ss_pred ceEeeccccCC--CCCcccccccccceEEeeCcccCCcCchhccCcccCCceeecCccccc--ccCcccccccccccccc
Q 039290 474 GLYLQNNKLEG--SIPEDLCHLYRLANLYLGDNKLSGRLPACLGNLTSLRDLSLGSNALTS--IIPSTLWNLKDILRFNL 549 (1049)
Q Consensus 474 ~L~L~~N~l~~--~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L 549 (1049)
+|++++|++++ .+|..+.. ++.|.+.+.+|.. +++|+.|++++|++++ .+|. +++.|.+
T Consensus 361 ~L~L~~N~l~~l~~ip~~l~~--------L~~n~~~~~i~~~---~~~L~~L~ls~N~l~~~~~iP~------sl~~L~~ 423 (454)
T 1jl5_A 361 QLHVEYNPLREFPDIPESVED--------LRMNSHLAEVPEL---PQNLKQLHVETNPLREFPDIPE------SVEDLRM 423 (454)
T ss_dssp EEECCSSCCSSCCCCCTTCCE--------EECCC----------------------------------------------
T ss_pred EEECCCCCCCcCCCChHHHHh--------hhhcccccccccc---cCcCCEEECCCCcCCccccchh------hHhheeC
Confidence 99999999998 67776654 3457777777763 5789999999999987 4554 3566778
Q ss_pred cCCccCCCCccCcCC
Q 039290 550 SSNSLNGSLLPDIGN 564 (1049)
Q Consensus 550 s~N~l~~~~~~~~~~ 564 (1049)
++|.+.+..+.....
T Consensus 424 ~~~~~~~~~~~~~~~ 438 (454)
T 1jl5_A 424 NSERVVDPYEFAHET 438 (454)
T ss_dssp ---------------
T ss_pred cCcccCCccccCHHH
Confidence 888887766554443
No 45
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=2.6e-43 Score=420.63 Aligned_cols=253 Identities=23% Similarity=0.296 Sum_probs=212.9
Q ss_pred hcCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEEec
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVLEY 838 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 838 (1049)
.++|++.+.||+|+||+||+|+. .+|+.||+|++........+.+.+|+++|+.++|||||++++++.+.+.+|+||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 36799999999999999999996 47999999999776555567889999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecC--CCceEEecccCceecCCCcc
Q 039290 839 MSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNE--SMVGHLSDFGIAKILGKEES 916 (1049)
Q Consensus 839 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~--~~~~kl~DfGla~~~~~~~~ 916 (1049)
|+||+|.+++......+++.++..++.||+.||+||| +++|+||||||+|||++. .+.+||+|||+|+.+.....
T Consensus 236 ~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH---~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~ 312 (573)
T 3uto_A 236 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS 312 (573)
T ss_dssp CCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSE
T ss_pred cCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCc
Confidence 9999999999776667999999999999999999999 999999999999999985 48999999999998754432
Q ss_pred ccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhcccccccc
Q 039290 917 MRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLLNC 996 (1049)
Q Consensus 917 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1049)
....+||+.|||||++.+..|+.++||||+||++|||++|..||.+....+..........
T Consensus 313 --~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~----------------- 373 (573)
T 3uto_A 313 --VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDW----------------- 373 (573)
T ss_dssp --EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCC-----------------
T ss_pred --eeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCC-----------------
Confidence 3446799999999999999999999999999999999999999976332222111100000
Q ss_pred cccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 997 EENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 997 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
.........++.++.+||.+||+.||++|||++|+++|
T Consensus 374 -~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 374 -NMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp -CCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred -CCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 00011122346678999999999999999999999986
No 46
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=3.1e-43 Score=414.55 Aligned_cols=249 Identities=22% Similarity=0.284 Sum_probs=203.5
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeeccc---CCCHHHHHHH---HHHHhhcCCCceeeEEeeeecCCee
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEF---DGSLESFHAE---CKVMGSIRHRNLVKIISSCSNNDFK 832 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e---~~~l~~l~hpniv~l~~~~~~~~~~ 832 (1049)
.++|++.++||+|+||+||+|+.. +|+.||+|++.+.. ......+.+| +.+++.++|||||++++++.+.+.+
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 357999999999999999999964 79999999997542 2333344444 5666777999999999999999999
Q ss_pred EEEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecC
Q 039290 833 ALVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILG 912 (1049)
Q Consensus 833 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~ 912 (1049)
|+|||||+||+|.+++...+ .+++..++.++.||+.||+||| ++|||||||||+|||++.+|.+||+|||+|+.+.
T Consensus 268 ylVmEy~~GGdL~~~l~~~~-~l~E~~a~~y~~qIl~aL~yLH---~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~ 343 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFS 343 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHeEEeCCCCEEecccceeeecC
Confidence 99999999999999998754 4899999999999999999999 9999999999999999999999999999998775
Q ss_pred CCccccccccccccCcccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCCccccccch-HHHhhhhccccCCcchhcc
Q 039290 913 KEESMRQTKTLGTIGYMAPEYGRE-GKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMS-LKRWVGDSLLSCSITEVAD 990 (1049)
Q Consensus 913 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 990 (1049)
... ....+||+.|||||++.+ ..|+.++||||+||++|||++|..||.+....+.. ....+.
T Consensus 344 ~~~---~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~------------- 407 (689)
T 3v5w_A 344 KKK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL------------- 407 (689)
T ss_dssp SCC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHH-------------
T ss_pred CCC---CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhc-------------
Confidence 432 345689999999999965 57999999999999999999999999763322211 111100
Q ss_pred cccccccccCchhhHHHHHHHHHHHhhccccCCCCCCC-----HHHHHHH
Q 039290 991 ANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRIS-----MKDVANR 1035 (1049)
Q Consensus 991 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt-----~~ell~~ 1035 (1049)
......+...++++.+++.+|++.||++|++ ++|+++|
T Consensus 408 -------~~~~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H 450 (689)
T 3v5w_A 408 -------TMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 450 (689)
T ss_dssp -------HCCCCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred -------CCCCCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence 0011112335677899999999999999998 7888876
No 47
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=7e-42 Score=402.85 Aligned_cols=389 Identities=22% Similarity=0.283 Sum_probs=280.6
Q ss_pred CCCceeee--EEEcCCCCcEEEEEEeccccccccCCCCCCcchhhhhhcccCccccccCcccccccCCcEeccccCCccc
Q 039290 58 SSVCSWIG--VTCGVRNRRVTALNISYLGLTGTIPPQLGNLSFLAVLAIRNNSFFGSLPEELSHLRGLKYFDFRFNNFHI 135 (1049)
Q Consensus 58 ~~~c~w~g--v~c~~~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~l~~n~~~g~~p~~~~~L~~L~~L~l~~n~~~~ 135 (1049)
...|.|.+ |.|+. .+++ .+|. +. ++|++|+|++|.+++..|..++++++|++|++++|.+.+
T Consensus 5 ~~~c~~~~~~~~c~~------------~~l~-~lp~-l~--~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~ 68 (455)
T 3v47_A 5 TSECSVIGYNAICIN------------RGLH-QVPE-LP--AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGL 68 (455)
T ss_dssp --CCEEETTEEECCS------------SCCS-SCCC-CC--TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTC
T ss_pred cceeEEEccccCcCC------------CCcc-cCCC-CC--CccCEEEecCCccCcCChhHhccCccccEEECcCCcccc
Confidence 44577776 67753 3344 6666 32 689999999999998889999999999999999999987
Q ss_pred cC-cccccccCCccEEEeCCCCccCCCcccccCCCcccEEcCCCccCccccCCCcccccccCCCCccceEEeeccccCCC
Q 039290 136 EI-PSWFVSLPRLQHLLLKHNSFVGKIPETIGYLSLLQELDLSDNQLSGTIPSSIFNISSCQNLPVLEGLFISYNQLTGP 214 (1049)
Q Consensus 136 ~~-p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~l~~l~~L~~L~l~~N~l~~~ 214 (1049)
.+ |..|.++++|++|+|++|.+++..|..|+.+++|++|+|++|++++.+|..- .+..+++|++|+|++|++++.
T Consensus 69 ~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~----~~~~l~~L~~L~L~~n~l~~~ 144 (455)
T 3v47_A 69 VIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGN----FFKPLTSLEMLVLRDNNIKKI 144 (455)
T ss_dssp EECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSS----TTTTCTTCCEEECCSSBCCSC
T ss_pred eECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcc----cccCcccCCEEECCCCccCcc
Confidence 66 5679999999999999999998889999999999999999999998666541 124567799999999999988
Q ss_pred CCCC-cccccccceecccccccccccCCCCccc--cccceEEeccccccccCcccc--------ccccceEEEeeccccC
Q 039290 215 IPTN-LWKCRELHVVSLAFNKFQGGIPRDIGNL--TSVRNLFLGNNSLIGEIPNEI--------GNLRNLEVLGVQSSNL 283 (1049)
Q Consensus 215 ~p~~-l~~l~~L~~L~L~~N~l~~~~p~~~~~l--~~L~~L~L~~N~l~~~~p~~l--------~~l~~L~~L~L~~n~l 283 (1049)
.|.. +..+++|++|++++|++++..|..+.++ .+|+.|++++|.+.+..+..+ ..+++|+.|++++|++
T Consensus 145 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l 224 (455)
T 3v47_A 145 QPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGF 224 (455)
T ss_dssp CCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCC
T ss_pred CcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcc
Confidence 7876 7889999999999999999999999887 789999999999986655443 3668899999999999
Q ss_pred CCccccccccc---cccceEEeccCccCCCCCCcccCCCCCccEEEcCCCCCCCCCCccccCC--CCCceeecccCcccc
Q 039290 284 AGLIPASIFNI---STLKELAVTDNDLLGSLPSSIDLGLPNLERLFLGENNFSGTIPSSLTNI--SELSVLDFGFNSFSG 358 (1049)
Q Consensus 284 ~~~~p~~~~~l---~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l--~~L~~L~Ls~N~l~~ 358 (1049)
.+.+|..+... ++|+.|++++|.+.+... ..+.+.+..+..+..+ ++|++|++++|.+.+
T Consensus 225 ~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~ 289 (455)
T 3v47_A 225 KESMAKRFFDAIAGTKIQSLILSNSYNMGSSF---------------GHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFA 289 (455)
T ss_dssp CHHHHHHHHHHTTTCCEEEEECTTCTTTSCCT---------------TCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCE
T ss_pred cccchhhhhccccccceeeEeecccccccccc---------------chhhhccCcccccccccccCceEEEecCccccc
Confidence 98888877665 788888888887654211 1222222222233322 466667777777666
Q ss_pred CcccccccccccceeecccccccCCCCCcccccccccCCCCcEEEccCCccccCCCCccccccccccEEEccCCccccCC
Q 039290 359 LIPTTFGNLRSLKLLSLAGNVLTSPTPDLSFLSSLTSCRNLEIIYLSENPINGILPSSIGNFSISMKSLSMESCNISGGI 438 (1049)
Q Consensus 359 ~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~~~~~L~~L~L~~n~i~~~~ 438 (1049)
..|..|+.+++|++|++++|.++++++. .+..+++|++|+|++|.++ +..
T Consensus 290 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-----~~~~l~~L~~L~Ls~N~l~-------------------------~~~ 339 (455)
T 3v47_A 290 LLKSVFSHFTDLEQLTLAQNEINKIDDN-----AFWGLTHLLKLNLSQNFLG-------------------------SID 339 (455)
T ss_dssp ECTTTTTTCTTCCEEECTTSCCCEECTT-----TTTTCTTCCEEECCSSCCC-------------------------EEC
T ss_pred cchhhcccCCCCCEEECCCCcccccChh-----HhcCcccCCEEECCCCccC-------------------------CcC
Confidence 6666666666666666666666554332 2444455555555555444 334
Q ss_pred CCCCCCCCCccEEEccCCcccccCCccccCcCCCcceEeeccccCCCCCcccccccccceEEeeCcccCCcCc
Q 039290 439 PKELGNINNLTVIRLGNNELTGTIPVTLGRLQKLQGLYLQNNKLEGSIPEDLCHLYRLANLYLGDNKLSGRLP 511 (1049)
Q Consensus 439 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 511 (1049)
|..|.++++|++|+|++|++++..|..|..+++|++|+|++|+|++..+..+..+++|++|++++|++++..|
T Consensus 340 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 340 SRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp GGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred hhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 4455556666666666666666666666666666666666666665555556666667777777776665544
No 48
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=5.7e-42 Score=403.63 Aligned_cols=385 Identities=19% Similarity=0.248 Sum_probs=258.4
Q ss_pred eecccccccccccCCCCccccccceEEeccccccccCccccccccceEEEeeccccCCCcc-ccccccccccceEEeccC
Q 039290 227 VVSLAFNKFQGGIPRDIGNLTSVRNLFLGNNSLIGEIPNEIGNLRNLEVLGVQSSNLAGLI-PASIFNISTLKELAVTDN 305 (1049)
Q Consensus 227 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~l~~N 305 (1049)
.++.+++.++ .+|. +. ++|++|+|++|++++..|..|+++++|++|+|++|.+.+.+ |..|.++++|++|++++|
T Consensus 14 ~~~c~~~~l~-~lp~-l~--~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n 89 (455)
T 3v47_A 14 NAICINRGLH-QVPE-LP--AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYN 89 (455)
T ss_dssp EEECCSSCCS-SCCC-CC--TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTC
T ss_pred ccCcCCCCcc-cCCC-CC--CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCC
Confidence 4555566555 4454 22 56666666666666655666666666666666666655443 234455555555555555
Q ss_pred ccCCCCCCcccCCCCCccEEEcCCCCCCCCCCccccCCCCCceeecccCccccCcccc--cccccccceeecccccccCC
Q 039290 306 DLLGSLPSSIDLGLPNLERLFLGENNFSGTIPSSLTNISELSVLDFGFNSFSGLIPTT--FGNLRSLKLLSLAGNVLTSP 383 (1049)
Q Consensus 306 ~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~ 383 (1049)
++ ++..|..|+++++|++|++++|++++..+.. |+.+++|++|+|++|.++.+
T Consensus 90 ~l-------------------------~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~ 144 (455)
T 3v47_A 90 QF-------------------------LQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKI 144 (455)
T ss_dssp TT-------------------------CEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSC
T ss_pred cc-------------------------CccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCcc
Confidence 54 4444444444455555555555544422222 44445555555555554443
Q ss_pred CCCcccccccccCCCCcEEEccCCccccCCCCcccccc-ccccEEEccCCccccCCCCC--------CCCCCCccEEEcc
Q 039290 384 TPDLSFLSSLTSCRNLEIIYLSENPINGILPSSIGNFS-ISMKSLSMESCNISGGIPKE--------LGNINNLTVIRLG 454 (1049)
Q Consensus 384 ~~~~~~l~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~~~-~~L~~L~L~~n~i~~~~p~~--------~~~l~~L~~L~Ls 454 (1049)
.+.. .+..+++|++|++++|++++..+..+..+. .+++.|++++|.+.+..+.. +..+++|++|+++
T Consensus 145 ~~~~----~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls 220 (455)
T 3v47_A 145 QPAS----FFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLS 220 (455)
T ss_dssp CCCG----GGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECT
T ss_pred Cccc----ccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecC
Confidence 2210 134444555555555555544444444332 24555555555555443332 3456788888888
Q ss_pred CCcccccCCccccCc---CCCcceEeeccccCCCCCcccccccccceEEeeCcccCCcCchhccCc--ccCCceeecCcc
Q 039290 455 NNELTGTIPVTLGRL---QKLQGLYLQNNKLEGSIPEDLCHLYRLANLYLGDNKLSGRLPACLGNL--TSLRDLSLGSNA 529 (1049)
Q Consensus 455 ~N~l~~~~p~~~~~l---~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l--~~L~~L~L~~N~ 529 (1049)
+|++++..|..+... ++|+.|++++|.+.+... ..+.+....+..+..+ ++|++|++++|+
T Consensus 221 ~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~ 286 (455)
T 3v47_A 221 GNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSF--------------GHTNFKDPDNFTFKGLEASGVKTCDLSKSK 286 (455)
T ss_dssp TSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCT--------------TCCSSCCCCTTTTGGGTTSCCCEEECCSSC
T ss_pred CCcccccchhhhhccccccceeeEeecccccccccc--------------chhhhccCcccccccccccCceEEEecCcc
Confidence 888887777766554 778888888887654311 1222222333333333 678999999999
Q ss_pred cccccCcccccccccccccccCCccCCCCccCcCCCcceeEeecccccccccccccccCCCcccEEEeecccccCCcccc
Q 039290 530 LTSIIPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALSGVIPVTIGGLQGLQLLSLRYNRLQGPIPES 609 (1049)
Q Consensus 530 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~ 609 (1049)
+++.+|..+..+++|++|++++|++++..+..|..+++|++|+|++|++++..|..|+++++|+.|+|++|++++..|..
T Consensus 287 l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 366 (455)
T 3v47_A 287 IFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQS 366 (455)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTT
T ss_pred ccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhh
Confidence 99888888999999999999999999888888999999999999999999888999999999999999999999888999
Q ss_pred ccCccCCcEEeccCccccCCcccccccccccceeeccCCcccccCCCCC
Q 039290 610 FGGLKSLNFVDMSNNNLSGTIPKSMEALSYLKHLNLSFNQLEGEIPTRG 658 (1049)
Q Consensus 610 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~ 658 (1049)
|.++++|++|+|++|++++..+..+..+++|++|++++|+++|.+|...
T Consensus 367 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~ 415 (455)
T 3v47_A 367 FLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRID 415 (455)
T ss_dssp TTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTH
T ss_pred ccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCcch
Confidence 9999999999999999997777778999999999999999999999643
No 49
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=3.2e-42 Score=385.63 Aligned_cols=288 Identities=34% Similarity=0.549 Sum_probs=234.8
Q ss_pred cccHHHHHHHhcCCCCCceecCCCcEEEEEEEeCCCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCceeeEEeeeecC
Q 039290 750 RISYQDLLRATDGFSENKLLGMGSFGSVYKGVLPDGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRNLVKIISSCSNN 829 (1049)
Q Consensus 750 ~~~~~~~~~~~~~~~~~~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~ 829 (1049)
++++.++....++|+..+.||+|+||.||+|++.+++.||+|++........+.+.+|+++++.++||||+++++++.+.
T Consensus 28 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 107 (321)
T 2qkw_B 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDER 107 (321)
T ss_dssp --CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCT
T ss_pred eecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC
Confidence 34445556678899999999999999999999888999999998876666678899999999999999999999999999
Q ss_pred CeeEEEEeccCCCChhhhhhcCC---CccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEeccc
Q 039290 830 DFKALVLEYMSNGSLEKCLYSDN---YFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFG 906 (1049)
Q Consensus 830 ~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfG 906 (1049)
+..++||||+++|+|.+++.... ..+++.+++.++.|+++|++||| ++||+||||||+||+++.++.+||+|||
T Consensus 108 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg 184 (321)
T 2qkw_B 108 NEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFG 184 (321)
T ss_dssp TCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCSTTEEECTTCCEEECCCT
T ss_pred CeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhc---CCCeecCCCCHHHEEECCCCCEEEeecc
Confidence 99999999999999999987543 25899999999999999999999 9999999999999999999999999999
Q ss_pred CceecCCCcc-ccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccc-hHHHhhhhccccCC
Q 039290 907 IAKILGKEES-MRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEM-SLKRWVGDSLLSCS 984 (1049)
Q Consensus 907 la~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~~ 984 (1049)
+++....... .......||+.|+|||++.+..++.++||||+||++|||++|+.||......+. ....|.........
T Consensus 185 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 264 (321)
T 2qkw_B 185 ISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ 264 (321)
T ss_dssp TCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTC
T ss_pred cccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhcccccc
Confidence 9987543222 222334589999999999888999999999999999999999999976443322 23334332222222
Q ss_pred cchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhhhhc
Q 039290 985 ITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETLSAY 1046 (1049)
Q Consensus 985 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~~~~ 1046 (1049)
.....++.. .......++..+.+++.+||+.||++|||++|++++|+.+.+.....
T Consensus 265 ~~~~~~~~~------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~~~~ 320 (321)
T 2qkw_B 265 LEQIVDPNL------ADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQESV 320 (321)
T ss_dssp CCSSSSSSC------TTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSCCC
T ss_pred HHHhcChhh------ccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhcccCc
Confidence 222222221 12233567889999999999999999999999999999998765443
No 50
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=5.6e-42 Score=384.68 Aligned_cols=283 Identities=35% Similarity=0.564 Sum_probs=237.3
Q ss_pred ccccccHHHHHHHhcCCCCCceecCCCcEEEEEEEeCCCcEEEEEEeeccc-CCCHHHHHHHHHHHhhcCCCceeeEEee
Q 039290 747 TWRRISYQDLLRATDGFSENKLLGMGSFGSVYKGVLPDGMEIAAKVFHMEF-DGSLESFHAECKVMGSIRHRNLVKIISS 825 (1049)
Q Consensus 747 ~~~~~~~~~~~~~~~~~~~~~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~l~~~ 825 (1049)
..+.++++++....++|+..+.||+|+||.||+|+..+++.||+|++.... ......+.+|+++++.++||||++++++
T Consensus 16 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~ 95 (326)
T 3uim_A 16 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 95 (326)
T ss_dssp CCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEE
T ss_pred ccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEE
Confidence 456788999999999999999999999999999998889999999997654 2234478999999999999999999999
Q ss_pred eecCCeeEEEEeccCCCChhhhhhcCC---CccCHHHHHHHHHHHHHHHHHhHccCCC---CeEEcCCCCCCeeecCCCc
Q 039290 826 CSNNDFKALVLEYMSNGSLEKCLYSDN---YFLDILQRLKIMIDVASALEYLHFGYST---PIVHCDIKPSNVLLNESMV 899 (1049)
Q Consensus 826 ~~~~~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~LH~~~~~---~ivH~Dlkp~NIl~~~~~~ 899 (1049)
+.+.+..++||||+++|+|.+++.... ..+++..+..++.|++.||+||| +. ||+||||||+||+++.++.
T Consensus 96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~ivH~Dlkp~Nil~~~~~~ 172 (326)
T 3uim_A 96 CMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLH---DHCDPKIIHRDVKAANILLDEEFE 172 (326)
T ss_dssp ECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHH---HSSSSCEECCCCSGGGEEECTTCC
T ss_pred EecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCeEeCCCchhhEEECCCCC
Confidence 999999999999999999999997643 25899999999999999999999 66 9999999999999999999
Q ss_pred eEEecccCceecCCCccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccc---cccchHHHhh
Q 039290 900 GHLSDFGIAKILGKEESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIF---AGEMSLKRWV 976 (1049)
Q Consensus 900 ~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~---~~~~~~~~~~ 976 (1049)
+||+|||++...............||+.|+|||++.+..++.++||||+||++|||++|+.||+... ..+.....|.
T Consensus 173 ~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 252 (326)
T 3uim_A 173 AVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 252 (326)
T ss_dssp EEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHH
T ss_pred EEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHH
Confidence 9999999999876554444455668999999999988889999999999999999999999996422 2333455565
Q ss_pred hhccccCCcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHH
Q 039290 977 GDSLLSCSITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVR 1038 (1049)
Q Consensus 977 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~ 1038 (1049)
.............+.... .......+..+.+++.+||+.||++|||++|++++|++
T Consensus 253 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 308 (326)
T 3uim_A 253 KGLLKEKKLEALVDVDLQ------GNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308 (326)
T ss_dssp TTTTSSCCSTTSSCTTCT------TSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred HHHhhchhhhhhcChhhc------cccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence 555544444444443321 22335678899999999999999999999999999975
No 51
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.2e-41 Score=376.92 Aligned_cols=265 Identities=26% Similarity=0.394 Sum_probs=218.6
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEEec
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVLEY 838 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 838 (1049)
.++|...+.||+|+||+||+|++. +++.||+|++........+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 356888999999999999999964 6899999998655445567899999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCcccc
Q 039290 839 MSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEESMR 918 (1049)
Q Consensus 839 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~~~~ 918 (1049)
+++|+|.+++......+++.++..++.|+++||+||| +.||+||||||+||+++.++.+||+|||++..........
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (310)
T 3s95_A 89 IKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165 (310)
T ss_dssp CTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEECTTSCEEECCCTTCEECC------
T ss_pred cCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCcCeEEECCCCCEEEeecccceecccccccc
Confidence 9999999999887777999999999999999999999 9999999999999999999999999999998764333211
Q ss_pred -------------ccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCc
Q 039290 919 -------------QTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSI 985 (1049)
Q Consensus 919 -------------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 985 (1049)
.....||+.|+|||++.+..++.++||||+|+++|||++|..|+..............
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~--------- 236 (310)
T 3s95_A 166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNV--------- 236 (310)
T ss_dssp --------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCH---------
T ss_pred cccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhh---------
Confidence 1145789999999999999999999999999999999999999865332221111000
Q ss_pred chhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhhhhc
Q 039290 986 TEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETLSAY 1046 (1049)
Q Consensus 986 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~~~~ 1046 (1049)
....+ ...+..++..+.+++.+||+.||++|||++|+++.|+++.+.+...
T Consensus 237 ~~~~~----------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~~~ 287 (310)
T 3s95_A 237 RGFLD----------RYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLAGH 287 (310)
T ss_dssp HHHHH----------HTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHHC
T ss_pred hcccc----------ccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhccCc
Confidence 00000 0011234567899999999999999999999999999999877643
No 52
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=4.5e-41 Score=371.31 Aligned_cols=251 Identities=25% Similarity=0.333 Sum_probs=212.7
Q ss_pred hcCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEEec
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVLEY 838 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 838 (1049)
.++|+..+.||+|+||+||+|+. .+++.||+|++........+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 45799999999999999999995 57899999999877777778899999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCcccc
Q 039290 839 MSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEESMR 918 (1049)
Q Consensus 839 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~~~~ 918 (1049)
+++|+|.+++... .+++.+++.++.|++.|++||| ++||+||||||+||+++.++.+||+|||++........ .
T Consensus 99 ~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~ 172 (297)
T 3fxz_A 99 LAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-K 172 (297)
T ss_dssp CTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC-C
T ss_pred CCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc-c
Confidence 9999999998765 4899999999999999999999 99999999999999999999999999999987654432 2
Q ss_pred ccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhcccccccccc
Q 039290 919 QTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLLNCEE 998 (1049)
Q Consensus 919 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 998 (1049)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||......+........ ..
T Consensus 173 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~-------------------~~ 233 (297)
T 3fxz_A 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN-------------------GT 233 (297)
T ss_dssp BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHH-------------------CS
T ss_pred cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC-------------------CC
Confidence 34467899999999999999999999999999999999999999753222111111000 00
Q ss_pred cCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 999 NDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 999 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
.....+..++..+.+++.+||+.||++|||++|++++
T Consensus 234 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 234 PELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp CCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CCCCCccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 0111223456778999999999999999999999875
No 53
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=5.2e-41 Score=365.52 Aligned_cols=260 Identities=28% Similarity=0.407 Sum_probs=217.4
Q ss_pred hcCCCCCceecCCCcEEEEEEEeCCCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEEecc
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLPDGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVLEYM 839 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 839 (1049)
.++|++.+.||+|+||.||+|+..++..||+|+++... ...+++.+|++++++++||||+++++++.+.+..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 45788999999999999999999888899999997543 34578999999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCccccc
Q 039290 840 SNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEESMRQ 919 (1049)
Q Consensus 840 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~~~~~ 919 (1049)
++++|.+++...+..+++.+++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||++...........
T Consensus 86 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 162 (268)
T 3sxs_A 86 SNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSS 162 (268)
T ss_dssp TTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEEC
T ss_pred CCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCcceEEECCCCCEEEccCccceecchhhhhcc
Confidence 999999999887667999999999999999999999 99999999999999999999999999999987765544334
Q ss_pred cccccccCcccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCCccccccchHHHhhhhccccCCcchhcccccccccc
Q 039290 920 TKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFT-KKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLLNCEE 998 (1049)
Q Consensus 920 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 998 (1049)
....+++.|+|||++.+..++.++||||+|+++|||++ |+.||......+.......+.
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~-------------------- 222 (268)
T 3sxs_A 163 VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGH-------------------- 222 (268)
T ss_dssp CSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTC--------------------
T ss_pred cCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCC--------------------
Confidence 44556778999999988899999999999999999999 999997543322211110000
Q ss_pred cCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhhh
Q 039290 999 NDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETLS 1044 (1049)
Q Consensus 999 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~~ 1044 (1049)
....+..++..+.+++.+||+.||++|||++|++++|+++.++..
T Consensus 223 -~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~k 267 (268)
T 3sxs_A 223 -RLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKDK 267 (268)
T ss_dssp -CCCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC---
T ss_pred -CCCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhccC
Confidence 001112234578999999999999999999999999998876643
No 54
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=5.3e-41 Score=365.63 Aligned_cols=258 Identities=24% Similarity=0.380 Sum_probs=217.4
Q ss_pred hcCCCCCceecCCCcEEEEEEEeCCCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEEecc
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLPDGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVLEYM 839 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 839 (1049)
.++|+..+.||+|+||+||+|++.+++.||+|++.... ...+++.+|++++++++||||+++++++.+.+..++||||+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 87 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence 35688899999999999999999889999999997543 34578999999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCccccc
Q 039290 840 SNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEESMRQ 919 (1049)
Q Consensus 840 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~~~~~ 919 (1049)
++++|.+++......+++..++.++.|+++|++||| +.||+||||||+||+++.++.+||+|||++...........
T Consensus 88 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 164 (269)
T 4hcu_A 88 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 164 (269)
T ss_dssp TTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST
T ss_pred CCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHH---hCCeecCCcchheEEEcCCCCEEeccccccccccccccccc
Confidence 999999999887777999999999999999999999 99999999999999999999999999999987654443333
Q ss_pred cccccccCcccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCCccccccchHHHhhhhccccCCcchhcccccccccc
Q 039290 920 TKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFT-KKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLLNCEE 998 (1049)
Q Consensus 920 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 998 (1049)
....+++.|+|||++.+..++.++||||+|+++|||++ |..||......+.. .......
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~-~~~~~~~------------------- 224 (269)
T 4hcu_A 165 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV-EDISTGF------------------- 224 (269)
T ss_dssp TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH-HHHHTTC-------------------
T ss_pred cCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHH-HHHhcCc-------------------
Confidence 44556788999999988899999999999999999999 99999763322211 1110000
Q ss_pred cCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHh
Q 039290 999 NDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRET 1042 (1049)
Q Consensus 999 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~ 1042 (1049)
+...+...+..+.+++.+||+.||++|||++|++++|+++.++
T Consensus 225 -~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 225 -RLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp -CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred -cCCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 0011122356789999999999999999999999999998764
No 55
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=9e-41 Score=373.64 Aligned_cols=274 Identities=22% Similarity=0.306 Sum_probs=211.1
Q ss_pred hcCCCCCceecCCCcEEEEEEEeCCCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCceeeEEeeeecCC----eeEEE
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLPDGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRNLVKIISSCSNND----FKALV 835 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~----~~~lv 835 (1049)
.++|++.+.||+|+||+||+|++. ++.||||+++... .......+|+.++++++||||+++++++.+.. ..++|
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv 100 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI 100 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence 457899999999999999999974 7899999996542 23345667899999999999999999997744 46999
Q ss_pred EeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCC----------CeEEcCCCCCCeeecCCCceEEecc
Q 039290 836 LEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYST----------PIVHCDIKPSNVLLNESMVGHLSDF 905 (1049)
Q Consensus 836 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~----------~ivH~Dlkp~NIl~~~~~~~kl~Df 905 (1049)
|||+++|+|.+++.... +++.+++.++.|+++|++||| +. +|+||||||+||+++.++.+||+||
T Consensus 101 ~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~al~~LH---~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DF 175 (322)
T 3soc_A 101 TAFHEKGSLSDFLKANV--VSWNELCHIAETMARGLAYLH---EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADF 175 (322)
T ss_dssp EECCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHT---CCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCC
T ss_pred EecCCCCCHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHH---hhccccccccCCCEEeCCCChHhEEECCCCeEEEccC
Confidence 99999999999997654 899999999999999999999 88 9999999999999999999999999
Q ss_pred cCceecCCCccc-cccccccccCcccccccCC-----CCcCcccchHHHHHHHHHHHhCCCCCCccccccc-hHHHhhhh
Q 039290 906 GIAKILGKEESM-RQTKTLGTIGYMAPEYGRE-----GKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEM-SLKRWVGD 978 (1049)
Q Consensus 906 Gla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~-----~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~-~~~~~~~~ 978 (1049)
|+++........ ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||........ ......
T Consensus 176 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~-- 253 (322)
T 3soc_A 176 GLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEI-- 253 (322)
T ss_dssp TTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHH--
T ss_pred CcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhh--
Confidence 999876543322 2233578999999999876 3567789999999999999999999976433211 111110
Q ss_pred ccccCCcchhcccccccccc---cCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhh
Q 039290 979 SLLSCSITEVADANLLNCEE---NDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETL 1043 (1049)
Q Consensus 979 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~ 1043 (1049)
.......++.+........ ........++.++.+++.+||+.||++|||++|+++.|+++.+..
T Consensus 254 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~~ 320 (322)
T 3soc_A 254 -GQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRLT 320 (322)
T ss_dssp -CSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred -ccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 0011111111111000000 011122346678999999999999999999999999999987653
No 56
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.3e-39 Score=380.45 Aligned_cols=377 Identities=17% Similarity=0.162 Sum_probs=239.8
Q ss_pred hhhhhhcccCccccccCcccccccCCcEeccccCCccccCcccccccCCccEEEeCCCCccCCCcccccCCCcccEEcCC
Q 039290 98 FLAVLAIRNNSFFGSLPEELSHLRGLKYFDFRFNNFHIEIPSWFVSLPRLQHLLLKHNSFVGKIPETIGYLSLLQELDLS 177 (1049)
Q Consensus 98 ~L~~L~l~~n~~~g~~p~~~~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls 177 (1049)
.++..........+..|.+++++++|++||+++|++++ +| .++.+++|++|+|++|.+++ +| ++.+++|++|+|+
T Consensus 19 ~l~~~~~~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls 93 (457)
T 3bz5_A 19 NFASEVAAAFEMQATDTISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACD 93 (457)
T ss_dssp HHHHHHHHHTTCCTTSEEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECC
T ss_pred HHHHHHHHhcCcCcccccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECc
Confidence 34444444555556667788888889999999888885 45 68888888999998888886 44 8888888888888
Q ss_pred CccCccccCCCcccccccCCCCccceEEeeccccCCCCCCCcccccccceecccccccccccCCCCccccccceEEeccc
Q 039290 178 DNQLSGTIPSSIFNISSCQNLPVLEGLFISYNQLTGPIPTNLWKCRELHVVSLAFNKFQGGIPRDIGNLTSVRNLFLGNN 257 (1049)
Q Consensus 178 ~N~l~g~ip~~~~~l~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 257 (1049)
+|++++ +| + ..+++|++|++++|++++ +| +..+++|++|++++|++++. | ++++++|++|++++|
T Consensus 94 ~N~l~~-~~--~------~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n 158 (457)
T 3bz5_A 94 SNKLTN-LD--V------TPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLN 158 (457)
T ss_dssp SSCCSC-CC--C------TTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTC
T ss_pred CCCCce-ee--c------CCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCC
Confidence 888885 33 3 345668888888888875 43 66667777777777776652 2 666666666666666
Q ss_pred cccccCccccccccceEEEeeccccCCCccccccccccccceEEeccCccCCCCCCcccCCCCCccEEEcCCCCCCCCCC
Q 039290 258 SLIGEIPNEIGNLRNLEVLGVQSSNLAGLIPASIFNISTLKELAVTDNDLLGSLPSSIDLGLPNLERLFLGENNFSGTIP 337 (1049)
Q Consensus 258 ~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p 337 (1049)
+..+.+ .++.+++|+.|++++|++++. | +..+ ++|+.|++++|++++.
T Consensus 159 ~~~~~~--~~~~l~~L~~L~ls~n~l~~l-~--l~~l-------------------------~~L~~L~l~~N~l~~~-- 206 (457)
T 3bz5_A 159 KKITKL--DVTPQTQLTTLDCSFNKITEL-D--VSQN-------------------------KLLNRLNCDTNNITKL-- 206 (457)
T ss_dssp SCCCCC--CCTTCTTCCEEECCSSCCCCC-C--CTTC-------------------------TTCCEEECCSSCCSCC--
T ss_pred Cccccc--ccccCCcCCEEECCCCcccee-c--cccC-------------------------CCCCEEECcCCcCCee--
Confidence 544444 355556666666665555542 2 4444 4455555555555432
Q ss_pred ccccCCCCCceeecccCccccCcccccccccccceeecccccccCCCCCcccccccccCCCCcEEEccCCccccCCCCcc
Q 039290 338 SSLTNISELSVLDFGFNSFSGLIPTTFGNLRSLKLLSLAGNVLTSPTPDLSFLSSLTSCRNLEIIYLSENPINGILPSSI 417 (1049)
Q Consensus 338 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~i~~~~p~~~ 417 (1049)
.++.+++|++|++++|++++ +| ++.+++|+.|++++|++++++ ...+++|+.|++++|+
T Consensus 207 -~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~--------~~~l~~L~~L~l~~n~--------- 265 (457)
T 3bz5_A 207 -DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELD--------VSTLSKLTTLHCIQTD--------- 265 (457)
T ss_dssp -CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCC--------CTTCTTCCEEECTTCC---------
T ss_pred -ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcC--------HHHCCCCCEEeccCCC---------
Confidence 24455555555555555554 23 455555555555555555543 1234555556555542
Q ss_pred ccccccccEEEccCCccccCCCCCCCCCCCccEEEccCCcccccCCccccCcCCCcceEeeccccCCCCCcccccccccc
Q 039290 418 GNFSISMKSLSMESCNISGGIPKELGNINNLTVIRLGNNELTGTIPVTLGRLQKLQGLYLQNNKLEGSIPEDLCHLYRLA 497 (1049)
Q Consensus 418 ~~~~~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 497 (1049)
|+.|++++|.+.+.+| ++.+++|+.|+|++|...+.+|. ...+|+.|++++| ++|+
T Consensus 266 ------L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~-------------~~L~ 321 (457)
T 3bz5_A 266 ------LLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDC---QAAGITELDLSQN-------------PKLV 321 (457)
T ss_dssp ------CSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEEC---TTCCCSCCCCTTC-------------TTCC
T ss_pred ------CCEEECCCCccCCccc--ccccccCCEEECCCCcccceecc---CCCcceEechhhc-------------ccCC
Confidence 3345566666555555 45667777777777776666553 3345555555544 4677
Q ss_pred eEEeeCcccCCcCchhccCcccCCceeecCcccccccCcccccccccccccccCCccCCCCccCcCCCcceeEeeccccc
Q 039290 498 NLYLGDNKLSGRLPACLGNLTSLRDLSLGSNALTSIIPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNA 577 (1049)
Q Consensus 498 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 577 (1049)
+|++++|++++. + ++++++|+.|++++|++++ ++.|..|++++|.+.|. +.+..|..+++++|+
T Consensus 322 ~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~ 385 (457)
T 3bz5_A 322 YLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNS 385 (457)
T ss_dssp EEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTB
T ss_pred EEECCCCccccc-c--cccCCcCcEEECCCCCCCC--------ccccccccccCCcEEec-----ceeeecCccccccCc
Confidence 777777777763 3 6777777777777777775 24566667777777653 344556667777777
Q ss_pred cccccccccc
Q 039290 578 LSGVIPVTIG 587 (1049)
Q Consensus 578 l~~~~p~~~~ 587 (1049)
++|.+|..+.
T Consensus 386 l~g~ip~~~~ 395 (457)
T 3bz5_A 386 LTIAVSPDLL 395 (457)
T ss_dssp EEEECCTTCB
T ss_pred EEEEcChhHh
Confidence 7777765543
No 57
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.8e-41 Score=376.80 Aligned_cols=251 Identities=24% Similarity=0.328 Sum_probs=200.0
Q ss_pred hcCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeeccc-CCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEEe
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEF-DGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVLE 837 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 837 (1049)
.++|++.+.||+|+||+||+|+. .+|+.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E 88 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLE 88 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEe
Confidence 56899999999999999999995 589999999997654 2335678999999999999999999999999999999999
Q ss_pred ccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCccc
Q 039290 838 YMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEESM 917 (1049)
Q Consensus 838 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~~~ 917 (1049)
|+++|+|.+++...+ .+++.+++.++.|++.|++||| +.||+||||||+||++++++.+||+|||++.........
T Consensus 89 ~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~ 164 (347)
T 3zgw_A 89 YCPGGELFDYIISQD-RLSEEETRVVFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDY 164 (347)
T ss_dssp CCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC-------
T ss_pred CCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCCc
Confidence 999999999987654 4899999999999999999999 999999999999999999999999999999876544433
Q ss_pred cccccccccCcccccccCCCCc-CcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhcccccccc
Q 039290 918 RQTKTLGTIGYMAPEYGREGKV-SRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLLNC 996 (1049)
Q Consensus 918 ~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1049)
......||+.|+|||++.+..+ +.++||||+||++|||++|..||......+..... ..
T Consensus 165 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i-~~------------------- 224 (347)
T 3zgw_A 165 HLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKI-MR------------------- 224 (347)
T ss_dssp -------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH-HH-------------------
T ss_pred cccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH-Hc-------------------
Confidence 4455679999999999988775 88999999999999999999999753222111110 00
Q ss_pred cccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 039290 997 EENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRL 1036 (1049)
Q Consensus 997 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L 1036 (1049)
.....+...+.++.+++.+||+.||++|||++|++++-
T Consensus 225 --~~~~~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~hp 262 (347)
T 3zgw_A 225 --GKYDVPKWLSPSSILLLQQMLQVDPKKRISMKNLLNHP 262 (347)
T ss_dssp --TCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTCH
T ss_pred --CCCCCCCCCCHHHHHHHHHHcccCHhHCcCHHHHhcCc
Confidence 00111122456788999999999999999999999874
No 58
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=2.3e-40 Score=377.13 Aligned_cols=261 Identities=24% Similarity=0.445 Sum_probs=214.4
Q ss_pred hcCCCCCceecCCCcEEEEEEEe--------CCCcEEEEEEeecccC-CCHHHHHHHHHHHhhc-CCCceeeEEeeeecC
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVL--------PDGMEIAAKVFHMEFD-GSLESFHAECKVMGSI-RHRNLVKIISSCSNN 829 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~--------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~ 829 (1049)
.++|++.+.||+|+||.||+|++ .++..||+|+++.... ...+++.+|+++++++ +||||+++++++.+.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 35788999999999999999985 2456799999975532 2346789999999999 899999999999999
Q ss_pred CeeEEEEeccCCCChhhhhhcCC---------------CccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeee
Q 039290 830 DFKALVLEYMSNGSLEKCLYSDN---------------YFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLL 894 (1049)
Q Consensus 830 ~~~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~ 894 (1049)
+..++||||+++|+|.+++...+ ..+++.+++.++.||++||+||| ++||+||||||+||++
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchhhEEE
Confidence 99999999999999999997653 24789999999999999999999 9999999999999999
Q ss_pred cCCCceEEecccCceecCCCccc-cccccccccCcccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCCccccccchH
Q 039290 895 NESMVGHLSDFGIAKILGKEESM-RQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFT-KKKPTDEIFAGEMSL 972 (1049)
Q Consensus 895 ~~~~~~kl~DfGla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~ 972 (1049)
+.++.+||+|||+++........ ......+|+.|+|||++.+..++.++|||||||++|||++ |..||......+..
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~- 315 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF- 315 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHH-
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHH-
Confidence 99999999999999876543322 2233456789999999998899999999999999999999 99999764322211
Q ss_pred HHhhhhccccCCcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhhh
Q 039290 973 KRWVGDSLLSCSITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETLS 1044 (1049)
Q Consensus 973 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~~ 1044 (1049)
...... .+...+..++.++.+++.+||+.||++|||++|++++|+++.....
T Consensus 316 -~~~~~~-------------------~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~~ 367 (370)
T 2psq_A 316 -KLLKEG-------------------HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 367 (370)
T ss_dssp -HHHHTT-------------------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred -HHHhcC-------------------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhc
Confidence 111000 0111223456789999999999999999999999999999987554
No 59
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.6e-40 Score=368.84 Aligned_cols=260 Identities=26% Similarity=0.410 Sum_probs=205.6
Q ss_pred HhcCCCCCceecCCCcEEEEEEEeCCCcEEEEEEeecccCC--CHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEE
Q 039290 759 ATDGFSENKLLGMGSFGSVYKGVLPDGMEIAAKVFHMEFDG--SLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVL 836 (1049)
Q Consensus 759 ~~~~~~~~~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 836 (1049)
..++|++.+.||+|+||+||+|+. +++.||||++...... ..+++.+|++++++++||||+++++++.+.+..++||
T Consensus 35 ~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 113 (309)
T 3p86_A 35 PWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVT 113 (309)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEE
T ss_pred ChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEE
Confidence 356789999999999999999987 6889999998755322 2457889999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCC--ccCHHHHHHHHHHHHHHHHHhHccCCCC--eEEcCCCCCCeeecCCCceEEecccCceecC
Q 039290 837 EYMSNGSLEKCLYSDNY--FLDILQRLKIMIDVASALEYLHFGYSTP--IVHCDIKPSNVLLNESMVGHLSDFGIAKILG 912 (1049)
Q Consensus 837 e~~~~g~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~ 912 (1049)
||+++|+|.+++..... .+++.+++.++.|+++||+||| +.| |+||||||+||+++.++.+||+|||+++...
T Consensus 114 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 190 (309)
T 3p86_A 114 EYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH---NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKA 190 (309)
T ss_dssp ECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHH---TSSSCCCCTTCCGGGEEECTTCCEEECCCC------
T ss_pred ecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCCEECCCCChhhEEEeCCCcEEECCCCCCcccc
Confidence 99999999999986543 4899999999999999999999 899 9999999999999999999999999998654
Q ss_pred CCccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhcccc
Q 039290 913 KEESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADAN 992 (1049)
Q Consensus 913 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 992 (1049)
... .......||+.|+|||++.+..++.++||||+||++|||++|+.||......+... .....
T Consensus 191 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~--~~~~~------------- 254 (309)
T 3p86_A 191 STF-LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVA--AVGFK------------- 254 (309)
T ss_dssp ------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHH--HHHHS-------------
T ss_pred ccc-cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH--HHHhc-------------
Confidence 322 22334578999999999999999999999999999999999999997643222111 11000
Q ss_pred cccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhh
Q 039290 993 LLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETL 1043 (1049)
Q Consensus 993 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~ 1043 (1049)
..+...+..++.++.+++.+||+.||++|||++|+++.|+++.++.
T Consensus 255 -----~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~ 300 (309)
T 3p86_A 255 -----CKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300 (309)
T ss_dssp -----CCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred -----CCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence 0011122335667899999999999999999999999999988754
No 60
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=6e-40 Score=366.46 Aligned_cols=262 Identities=22% Similarity=0.293 Sum_probs=216.5
Q ss_pred ccccHHHHHHHhcC----------CCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCC
Q 039290 749 RRISYQDLLRATDG----------FSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHR 817 (1049)
Q Consensus 749 ~~~~~~~~~~~~~~----------~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hp 817 (1049)
..++++++..+++. |+..+.||+|+||.||+|+.. +|+.||||++........+.+.+|+.++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 34677777776653 667789999999999999965 7999999999877666778899999999999999
Q ss_pred ceeeEEeeeecCCeeEEEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCC
Q 039290 818 NLVKIISSCSNNDFKALVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNES 897 (1049)
Q Consensus 818 niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~ 897 (1049)
||+++++++...+..++||||+++++|.+++... .+++.++..++.|+++||+||| +.||+||||||+||+++.+
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~ 177 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV--RLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSILLTLD 177 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTT
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCC
Confidence 9999999999999999999999999999988754 4899999999999999999999 9999999999999999999
Q ss_pred CceEEecccCceecCCCccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhh
Q 039290 898 MVGHLSDFGIAKILGKEESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVG 977 (1049)
Q Consensus 898 ~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~ 977 (1049)
+.+||+|||++........ ......||+.|+|||++.+..++.++||||+||++|||++|+.||......+ ......
T Consensus 178 ~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~--~~~~~~ 254 (321)
T 2c30_A 178 GRVKLSDFGFCAQISKDVP-KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQ--AMKRLR 254 (321)
T ss_dssp CCEEECCCTTCEECCSSSC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHH
T ss_pred CcEEEeeeeeeeecccCcc-ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHh
Confidence 9999999999987654332 2334678999999999999899999999999999999999999997532211 111110
Q ss_pred hccccCCcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 978 DSLLSCSITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 978 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
.. ...........+..+.+++.+||+.||++|||++|++++
T Consensus 255 ~~-----------------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 255 DS-----------------PPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp HS-----------------SCCCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cC-----------------CCCCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00 000111122345678999999999999999999999986
No 61
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=2.1e-40 Score=363.86 Aligned_cols=259 Identities=24% Similarity=0.381 Sum_probs=214.8
Q ss_pred hcCCCCCceecCCCcEEEEEEEeCCCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEEecc
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLPDGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVLEYM 839 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 839 (1049)
.++|++.+.||+|+||+||+|++.++..||+|+++... ...+++.+|++++++++||||+++++++.+.+..++||||+
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 101 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 101 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence 45788899999999999999999888899999997543 34578999999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCccccc
Q 039290 840 SNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEESMRQ 919 (1049)
Q Consensus 840 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~~~~~ 919 (1049)
++++|.+++......+++.+++.++.|++.|++||| ++||+||||||+||+++.++.+||+|||++...........
T Consensus 102 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 178 (283)
T 3gen_A 102 ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS 178 (283)
T ss_dssp TTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHST
T ss_pred CCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCccceEEEcCCCCEEEccccccccccccccccc
Confidence 999999999876667999999999999999999999 99999999999999999999999999999987654433333
Q ss_pred cccccccCcccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCCccccccchHHHhhhhccccCCcchhcccccccccc
Q 039290 920 TKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFT-KKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLLNCEE 998 (1049)
Q Consensus 920 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 998 (1049)
....+|+.|+|||++.+..++.++||||+|+++|||++ |+.||......+..... ... .
T Consensus 179 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~-~~~-~------------------ 238 (283)
T 3gen_A 179 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI-AQG-L------------------ 238 (283)
T ss_dssp TSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH-HTT-C------------------
T ss_pred cCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHH-hcc-c------------------
Confidence 34456788999999988899999999999999999998 99999764322211111 000 0
Q ss_pred cCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhh
Q 039290 999 NDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETL 1043 (1049)
Q Consensus 999 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~ 1043 (1049)
+...+..++..+.+++.+||+.+|++|||++|++++|+++.++-
T Consensus 239 -~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~e 282 (283)
T 3gen_A 239 -RLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 282 (283)
T ss_dssp -CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred -CCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhcc
Confidence 00111223467899999999999999999999999999998763
No 62
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=2.2e-39 Score=360.34 Aligned_cols=282 Identities=30% Similarity=0.465 Sum_probs=227.1
Q ss_pred ccccccHHHHHHHhcCCCCC------ceecCCCcEEEEEEEeCCCcEEEEEEeeccc----CCCHHHHHHHHHHHhhcCC
Q 039290 747 TWRRISYQDLLRATDGFSEN------KLLGMGSFGSVYKGVLPDGMEIAAKVFHMEF----DGSLESFHAECKVMGSIRH 816 (1049)
Q Consensus 747 ~~~~~~~~~~~~~~~~~~~~------~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h 816 (1049)
....+++.++..++++|... +.||+|+||.||+|+. +++.||+|++.... ....+.+.+|++++++++|
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 34668899999999988877 9999999999999987 68899999986543 2335778999999999999
Q ss_pred CceeeEEeeeecCCeeEEEEeccCCCChhhhhhcC--CCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeee
Q 039290 817 RNLVKIISSCSNNDFKALVLEYMSNGSLEKCLYSD--NYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLL 894 (1049)
Q Consensus 817 pniv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~ 894 (1049)
|||+++++++.+.+..++||||+++++|.+++... ...+++..++.++.|++.||+||| +.||+||||||+||++
T Consensus 90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nili 166 (307)
T 2nru_A 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILL 166 (307)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEE
T ss_pred CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecCCCCHHHEEE
Confidence 99999999999999999999999999999998643 345899999999999999999999 9999999999999999
Q ss_pred cCCCceEEecccCceecCCCccc-cccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHH
Q 039290 895 NESMVGHLSDFGIAKILGKEESM-RQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLK 973 (1049)
Q Consensus 895 ~~~~~~kl~DfGla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~ 973 (1049)
+.++.+||+|||++......... ......|++.|+|||.+.+ .++.++||||+|+++|||++|..||......+.. .
T Consensus 167 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~-~ 244 (307)
T 2nru_A 167 DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL-L 244 (307)
T ss_dssp CTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBT-T
T ss_pred cCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHH-H
Confidence 99999999999999876543221 2233568999999998865 6899999999999999999999999864433221 1
Q ss_pred Hhhhhcc-ccCCcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHH
Q 039290 974 RWVGDSL-LSCSITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRE 1041 (1049)
Q Consensus 974 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~ 1041 (1049)
.+..... ....+.+..+..+ ...+..++..+.+++.+||+.||++|||++|++++|+++..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 245 DIKEEIEDEEKTIEDYIDKKM-------NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp HHHHHHHTTSCCHHHHSCSSC-------SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred HHHHHhhhhhhhhhhhccccc-------cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 1211111 1111222222211 12235677889999999999999999999999999998754
No 63
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=1.8e-40 Score=371.48 Aligned_cols=261 Identities=23% Similarity=0.399 Sum_probs=213.2
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC----CCcEEEEEEeeccc-CCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEE
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP----DGMEIAAKVFHMEF-DGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKAL 834 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 834 (1049)
.++|++.+.||+|+||+||+|++. .+..||||+++... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 356888999999999999999964 34569999997543 2235678999999999999999999999999999999
Q ss_pred EEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCC
Q 039290 835 VLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKE 914 (1049)
Q Consensus 835 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~ 914 (1049)
||||+++|+|.+++......+++.+++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++.....
T Consensus 128 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 204 (325)
T 3kul_A 128 VTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204 (325)
T ss_dssp EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCSSCEECC--
T ss_pred EeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEECCCCCEEECCCCcccccccC
Confidence 99999999999999877667999999999999999999999 999999999999999999999999999999877543
Q ss_pred ccc--cccccccccCcccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCCccccccchHHHhhhhccccCCcchhccc
Q 039290 915 ESM--RQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFT-KKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADA 991 (1049)
Q Consensus 915 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 991 (1049)
... ......+|+.|+|||++.+..++.++||||+||++|||++ |..||......+..... ...
T Consensus 205 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~-~~~------------- 270 (325)
T 3kul_A 205 PDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV-EEG------------- 270 (325)
T ss_dssp --CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHH-HTT-------------
T ss_pred ccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHH-HcC-------------
Confidence 221 2223345778999999988899999999999999999999 99999764332211111 000
Q ss_pred ccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhhh
Q 039290 992 NLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETLS 1044 (1049)
Q Consensus 992 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~~ 1044 (1049)
.+...+..++.++.+++.+||+.||++|||++|+++.|+++.+...
T Consensus 271 -------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~ 316 (325)
T 3kul_A 271 -------YRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE 316 (325)
T ss_dssp -------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC
T ss_pred -------CCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcc
Confidence 0111123456789999999999999999999999999999987543
No 64
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1.2e-40 Score=372.27 Aligned_cols=249 Identities=23% Similarity=0.308 Sum_probs=208.1
Q ss_pred HhcCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeecccC--CCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEE
Q 039290 759 ATDGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEFD--GSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALV 835 (1049)
Q Consensus 759 ~~~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 835 (1049)
..++|++.+.||+|+||.||+|++ .+|+.||+|++..... ...+++.+|+++++.++||||+++++++.+.+..++|
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 92 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLI 92 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence 356899999999999999999996 5899999999976532 2346788999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCc
Q 039290 836 LEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEE 915 (1049)
Q Consensus 836 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~ 915 (1049)
|||+++|+|.+++...+ .+++.+++.++.|+++|++||| ++||+||||||+||+++.++.+||+|||++.......
T Consensus 93 ~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 168 (328)
T 3fe3_A 93 MEYASGGEVFDYLVAHG-RMKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG 168 (328)
T ss_dssp ECCCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC
T ss_pred EECCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC
Confidence 99999999999987654 4899999999999999999999 9999999999999999999999999999998765433
Q ss_pred cccccccccccCcccccccCCCCcC-cccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhcccccc
Q 039290 916 SMRQTKTLGTIGYMAPEYGREGKVS-RKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLL 994 (1049)
Q Consensus 916 ~~~~~~~~~~~~y~aPE~~~~~~~~-~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1049)
......||+.|+|||++.+..++ .++||||+||++|||++|+.||......+.......
T Consensus 169 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~------------------ 228 (328)
T 3fe3_A 169 --KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR------------------ 228 (328)
T ss_dssp --GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH------------------
T ss_pred --ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHh------------------
Confidence 23456799999999999887765 799999999999999999999976322211111100
Q ss_pred cccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 995 NCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 995 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
.....+...+.++.+++.+||+.||.+|||++|+++|
T Consensus 229 ----~~~~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 229 ----GKYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp ----CCCCCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred ----CCCCCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0111112345678999999999999999999999876
No 65
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=7.5e-41 Score=382.56 Aligned_cols=260 Identities=25% Similarity=0.424 Sum_probs=215.0
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccC-CCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEEe
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFD-GSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVLE 837 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 837 (1049)
.++|.+.+.||+|+||.||+|++. +++.||||+++.... ...+++.+|++++++++||||+++++++.+.+..++|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 457888999999999999999975 789999999875432 223568899999999999999999999999999999999
Q ss_pred ccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCccc
Q 039290 838 YMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEESM 917 (1049)
Q Consensus 838 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~~~ 917 (1049)
|+++|+|.+++...+..+++.++..++.|+++||+||| +++|+||||||+||+++.++.+||+|||+++........
T Consensus 193 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~ 269 (377)
T 3cbl_A 193 LVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYA 269 (377)
T ss_dssp CCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEE
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCcee
Confidence 99999999999877667899999999999999999999 999999999999999999999999999999865432211
Q ss_pred c-ccccccccCcccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCCccccccchHHHhhhhccccCCcchhccccccc
Q 039290 918 R-QTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFT-KKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLLN 995 (1049)
Q Consensus 918 ~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1049)
. .....+++.|+|||++.+..++.++|||||||++|||++ |..||......+. ...+..
T Consensus 270 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~--~~~~~~----------------- 330 (377)
T 3cbl_A 270 ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQT--REFVEK----------------- 330 (377)
T ss_dssp CCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHH--HHHHHT-----------------
T ss_pred ecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH--HHHHHc-----------------
Confidence 1 112235778999999988899999999999999999998 9999976432211 111110
Q ss_pred ccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhh
Q 039290 996 CEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETL 1043 (1049)
Q Consensus 996 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~ 1043 (1049)
..+.+.+..++.++.+++.+||+.||++|||++++++.|+++.++.
T Consensus 331 --~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~~ 376 (377)
T 3cbl_A 331 --GGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKRH 376 (377)
T ss_dssp --TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred --CCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhhc
Confidence 0011122345678999999999999999999999999999998764
No 66
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1e-40 Score=368.61 Aligned_cols=276 Identities=25% Similarity=0.409 Sum_probs=212.4
Q ss_pred hcCCCCCceecCCCcEEEEEEEe-----CCCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCceeeEEeeeec--CCee
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVL-----PDGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRNLVKIISSCSN--NDFK 832 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~--~~~~ 832 (1049)
.++|++.+.||+|+||+||+|++ .+++.||+|++........+.+.+|++++++++||||+++++++.. ....
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 35788999999999999999984 3688999999976554456788999999999999999999999854 3568
Q ss_pred EEEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecC
Q 039290 833 ALVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILG 912 (1049)
Q Consensus 833 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~ 912 (1049)
++||||+++|+|.+++...+..+++.+++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||++....
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~ 165 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLP 165 (295)
T ss_dssp EEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCSCC---
T ss_pred EEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHhhEEEcCCCeEEEccCccccccc
Confidence 9999999999999999887777999999999999999999999 9999999999999999999999999999998765
Q ss_pred CCcc--ccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCc-chhc
Q 039290 913 KEES--MRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSI-TEVA 989 (1049)
Q Consensus 913 ~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 989 (1049)
.... .......++..|+|||++.+..++.++||||+|+++|||++|..||...... .....+........ ....
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 242 (295)
T 3ugc_A 166 QDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE---FMRMIGNDKQGQMIVFHLI 242 (295)
T ss_dssp ----------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHH---HHHHHCTTCCTHHHHHHHH
T ss_pred CCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHH---HHhhhcCccccchhHHHHH
Confidence 4332 1222345677899999999889999999999999999999999998653211 11110000000000 0000
Q ss_pred ccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhhh
Q 039290 990 DANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETLS 1044 (1049)
Q Consensus 990 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~~ 1044 (1049)
. .+ ....+...+..++.++.+++.+||+.||++|||++|++++|+++++++.
T Consensus 243 ~-~~--~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l~ 294 (295)
T 3ugc_A 243 E-LL--KNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 294 (295)
T ss_dssp H-HH--HTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred H-HH--hccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhcc
Confidence 0 00 0111222334567889999999999999999999999999999988753
No 67
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=2.3e-40 Score=365.27 Aligned_cols=265 Identities=23% Similarity=0.360 Sum_probs=210.9
Q ss_pred hcCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeecccCCC---HHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEE
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEFDGS---LESFHAECKVMGSIRHRNLVKIISSCSNNDFKALV 835 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 835 (1049)
.++|++.+.||+|+||.||+|+. .+++.||+|++....... .+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 35799999999999999999995 478999999986544322 46788999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCc
Q 039290 836 LEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEE 915 (1049)
Q Consensus 836 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~ 915 (1049)
|||+++++|.+++...+ .+++.+++.++.|+++|++||| ++||+||||||+||+++.++.+||+|||++.......
T Consensus 90 ~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 165 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS 165 (294)
T ss_dssp EECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC----
T ss_pred EeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEEeCCCcccccccc
Confidence 99999999999987654 4899999999999999999999 9999999999999999999999999999998765443
Q ss_pred cccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhccccccc
Q 039290 916 SMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLLN 995 (1049)
Q Consensus 916 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1049)
........||+.|+|||.+.+..++.++||||+|+++|||++|+.||......+..........
T Consensus 166 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~---------------- 229 (294)
T 4eqm_A 166 LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSV---------------- 229 (294)
T ss_dssp ---------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCC----------------
T ss_pred ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccC----------------
Confidence 3334446789999999999998999999999999999999999999976432222111111000
Q ss_pred ccccCchhhHHHHHHHHHHHhhccccCCCCCC-CHHHHHHHHHHHHHhhhh
Q 039290 996 CEENDFSAREQCVSSIFSLAMDCTVDLPEKRI-SMKDVANRLVRIRETLSA 1045 (1049)
Q Consensus 996 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-t~~ell~~L~~i~~~~~~ 1045 (1049)
+........+++..+.+++.+|++.||++|| +++++.+.|+++..+...
T Consensus 230 -~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~~ 279 (294)
T 4eqm_A 230 -PNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENRA 279 (294)
T ss_dssp -CCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSST
T ss_pred -CCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhccC
Confidence 0000111133567899999999999999999 999999999887665443
No 68
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4e-40 Score=367.57 Aligned_cols=253 Identities=19% Similarity=0.260 Sum_probs=210.6
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEEec
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVLEY 838 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 838 (1049)
.++|++.+.||+|+||+||+|+.. +++.||+|.++.. ......+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 467999999999999999999965 6889999998754 23456788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecC--CCceEEecccCceecCCCcc
Q 039290 839 MSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNE--SMVGHLSDFGIAKILGKEES 916 (1049)
Q Consensus 839 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~--~~~~kl~DfGla~~~~~~~~ 916 (1049)
+++|+|.+++......+++.+++.++.|+++|++||| +.||+||||||+||+++. ++.+||+|||++........
T Consensus 83 ~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~ 159 (321)
T 1tki_A 83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN 159 (321)
T ss_dssp CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCE
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCc
Confidence 9999999999877667999999999999999999999 999999999999999986 78999999999988754332
Q ss_pred ccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhcccccccc
Q 039290 917 MRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLLNC 996 (1049)
Q Consensus 917 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1049)
.....+|+.|+|||++.+..++.++||||+||++|||++|..||......+.. ...... .
T Consensus 160 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~-~~i~~~-----------------~ 219 (321)
T 1tki_A 160 --FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQII-ENIMNA-----------------E 219 (321)
T ss_dssp --EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH-HHHHHT-----------------C
T ss_pred --cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHH-HHHHcC-----------------C
Confidence 33457899999999999888999999999999999999999999763222111 111100 0
Q ss_pred cccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 039290 997 EENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRL 1036 (1049)
Q Consensus 997 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L 1036 (1049)
...........+.++.+++.+|++.||++|||++|+++|-
T Consensus 220 ~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp 259 (321)
T 1tki_A 220 YTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHP 259 (321)
T ss_dssp CCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred CCCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcCh
Confidence 0001111224567899999999999999999999999874
No 69
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1e-39 Score=369.00 Aligned_cols=252 Identities=22% Similarity=0.276 Sum_probs=208.6
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccCC------CHHHHHHHHHHHhhcCCCceeeEEeeeecCCee
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFDG------SLESFHAECKVMGSIRHRNLVKIISSCSNNDFK 832 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~ 832 (1049)
.++|++.+.||+|+||+||+|+.. +|+.||+|+++..... ..+.+.+|+.++++++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 457899999999999999999965 7899999999765422 357899999999999999999999999999999
Q ss_pred EEEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCC----ceEEecccCc
Q 039290 833 ALVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESM----VGHLSDFGIA 908 (1049)
Q Consensus 833 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~----~~kl~DfGla 908 (1049)
++||||+++|+|.+++.... .+++.++..++.||+.|++||| +.||+||||||+||+++.++ .+||+|||++
T Consensus 91 ~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a 166 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (361)
T ss_dssp EEEEECCCSCBHHHHHTTCS-CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCSSC
T ss_pred EEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeCCCCCccCEEEEecCCc
Confidence 99999999999999997654 5899999999999999999999 99999999999999998776 7999999999
Q ss_pred eecCCCccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchh
Q 039290 909 KILGKEESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEV 988 (1049)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 988 (1049)
....... ......||+.|+|||++.+..++.++||||+||++|+|++|..||......+.. ......
T Consensus 167 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~-~~i~~~---------- 233 (361)
T 2yab_A 167 HEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL-ANITAV---------- 233 (361)
T ss_dssp EECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHH-HHHHTT----------
T ss_pred eEcCCCC--ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHhc----------
Confidence 8765432 233457999999999999889999999999999999999999999753222111 111000
Q ss_pred cccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 989 ADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 989 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
............+.++.+++.+|++.||++|||++|+++|
T Consensus 234 -------~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 273 (361)
T 2yab_A 234 -------SYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (361)
T ss_dssp -------CCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred -------CCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0000111223356778999999999999999999999875
No 70
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=1.3e-39 Score=362.20 Aligned_cols=271 Identities=24% Similarity=0.288 Sum_probs=208.5
Q ss_pred hcCCCCCceecCCCcEEEEEEEeCCCcEEEEEEeecccC--CCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEEe
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLPDGMEIAAKVFHMEFD--GSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVLE 837 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 837 (1049)
.++|++.+.||+|+||+||+|+..+++.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 467999999999999999999998899999999975432 234678899999999999999999999999999999999
Q ss_pred ccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCccc
Q 039290 838 YMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEESM 917 (1049)
Q Consensus 838 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~~~ 917 (1049)
|+++ +|.+++......+++.+++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++.......
T Consensus 100 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~- 174 (311)
T 3niz_A 100 FMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR- 174 (311)
T ss_dssp CCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC-
T ss_pred CCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCchHhEEECCCCCEEEccCcCceecCCCcc-
Confidence 9975 888888877777999999999999999999999 99999999999999999999999999999987653322
Q ss_pred cccccccccCcccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhc-cccCCcchhcc-----
Q 039290 918 RQTKTLGTIGYMAPEYGRE-GKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDS-LLSCSITEVAD----- 990 (1049)
Q Consensus 918 ~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----- 990 (1049)
......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||......+.......... .....+....+
T Consensus 175 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 254 (311)
T 3niz_A 175 SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWK 254 (311)
T ss_dssp ---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHH
T ss_pred cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhh
Confidence 2334578999999998876 5689999999999999999999999976544332211111000 00000000000
Q ss_pred -ccccccccc-CchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 991 -ANLLNCEEN-DFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 991 -~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
......... .......++.++.+++.+|++.||++|||++|+++|
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 255 QRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp SCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 000000000 011122345678999999999999999999999985
No 71
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.1e-39 Score=365.56 Aligned_cols=249 Identities=24% Similarity=0.293 Sum_probs=208.2
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecc---cCCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEE
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHME---FDGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALV 835 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 835 (1049)
.++|+..+.||+|+||+||+|+.. +|+.||+|+++.. .....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 357889999999999999999965 7899999999764 244567889999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCc
Q 039290 836 LEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEE 915 (1049)
Q Consensus 836 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~ 915 (1049)
|||+++|+|.+++...+ .+++.+++.++.||+.||+||| ++||+||||||+||+++.++.+||+|||+++......
T Consensus 84 ~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 159 (337)
T 1o6l_A 84 MEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159 (337)
T ss_dssp EECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred EeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCC
Confidence 99999999999887654 4899999999999999999999 9999999999999999999999999999998643222
Q ss_pred cccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhccccccc
Q 039290 916 SMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLLN 995 (1049)
Q Consensus 916 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1049)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||......+. ...+. ..
T Consensus 160 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~--~~~i~------------~~---- 220 (337)
T 1o6l_A 160 -ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL--FELIL------------ME---- 220 (337)
T ss_dssp -CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHH------------HC----
T ss_pred -CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHH--HHHHH------------cC----
Confidence 223446799999999999999999999999999999999999999975322111 11000 00
Q ss_pred ccccCchhhHHHHHHHHHHHhhccccCCCCCC-----CHHHHHHH
Q 039290 996 CEENDFSAREQCVSSIFSLAMDCTVDLPEKRI-----SMKDVANR 1035 (1049)
Q Consensus 996 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----t~~ell~~ 1035 (1049)
....+...+.++.+++.+||+.||++|| +++|+++|
T Consensus 221 ----~~~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 221 ----EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp ----CCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred ----CCCCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 0011123456789999999999999999 89999887
No 72
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=8.5e-40 Score=355.70 Aligned_cols=258 Identities=24% Similarity=0.383 Sum_probs=216.1
Q ss_pred hcCCCCCceecCCCcEEEEEEEeCCCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEEecc
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLPDGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVLEYM 839 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 839 (1049)
.++|+..+.||+|+||.||+|+..+++.||+|+++... ...+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM 85 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTT-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence 35788899999999999999999889999999997653 34578999999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCccccc
Q 039290 840 SNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEESMRQ 919 (1049)
Q Consensus 840 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~~~~~ 919 (1049)
++++|.+++......+++.+++.++.|+++|++||| ++||+||||||+||+++.++.+||+|||++...........
T Consensus 86 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 162 (267)
T 3t9t_A 86 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 162 (267)
T ss_dssp TTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST
T ss_pred CCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEECCCCCEEEccccccccccccccccc
Confidence 999999999887777899999999999999999999 99999999999999999999999999999987654332233
Q ss_pred cccccccCcccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCCccccccchHHHhhhhccccCCcchhcccccccccc
Q 039290 920 TKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFT-KKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLLNCEE 998 (1049)
Q Consensus 920 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 998 (1049)
....+++.|+|||++.+..++.++||||+|+++|||++ |..||......+. ...+....
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~--~~~i~~~~------------------ 222 (267)
T 3t9t_A 163 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV--VEDISTGF------------------ 222 (267)
T ss_dssp TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH--HHHHHTTC------------------
T ss_pred ccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHH--HHHHhcCC------------------
Confidence 34456788999999988889999999999999999999 8999875322211 11110000
Q ss_pred cCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHh
Q 039290 999 NDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRET 1042 (1049)
Q Consensus 999 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~ 1042 (1049)
+...+..++..+.+++.+||+.||++|||++|++++|+++.++
T Consensus 223 -~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 223 -RLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp -CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred -cCCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 0001122456789999999999999999999999999998764
No 73
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=6.8e-40 Score=373.36 Aligned_cols=260 Identities=25% Similarity=0.458 Sum_probs=203.2
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC----CCcEEEEEEeecccC-CCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEE
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP----DGMEIAAKVFHMEFD-GSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKAL 834 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~----~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 834 (1049)
.++|++.+.||+|+||.||+|+.. ++..||||+++.... ...+++.+|++++++++||||+++++++.+.+..++
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 357999999999999999999864 577899999976432 234678999999999999999999999999999999
Q ss_pred EEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCC
Q 039290 835 VLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKE 914 (1049)
Q Consensus 835 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~ 914 (1049)
||||+++|+|.+++...+..+++.+++.++.|+++||+||| +.||+||||||+||+++.++.+||+|||+++.....
T Consensus 124 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 200 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDD 200 (373)
T ss_dssp EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEEcCCCCEEECcCccccccccC
Confidence 99999999999999887777999999999999999999999 999999999999999999999999999999876543
Q ss_pred cccc--ccccccccCcccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCCccccccchHHHhhhhccccCCcchhccc
Q 039290 915 ESMR--QTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFT-KKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADA 991 (1049)
Q Consensus 915 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 991 (1049)
.... .....+++.|+|||++.+..++.++|||||||++|||++ |+.||......+. ...+...
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~--~~~i~~~------------ 266 (373)
T 2qol_A 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV--IKAVDEG------------ 266 (373)
T ss_dssp -------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHH--HHHHHTT------------
T ss_pred CccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHH--HHHHHcC------------
Confidence 2211 112235678999999998899999999999999999998 9999975432211 1111000
Q ss_pred ccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhh
Q 039290 992 NLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETL 1043 (1049)
Q Consensus 992 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~ 1043 (1049)
. +...+..++.++.+++.+||+.||++||+++|+++.|+++.+..
T Consensus 267 -~------~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 267 -Y------RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp -E------ECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred -C------CCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence 0 01112245677999999999999999999999999999997754
No 74
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=4.8e-39 Score=359.48 Aligned_cols=275 Identities=22% Similarity=0.245 Sum_probs=214.2
Q ss_pred cCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeeccc-CCCHHHHHHHHHHHhhcCCCceeeEEeeeecCC--eeEEEE
Q 039290 761 DGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEF-DGSLESFHAECKVMGSIRHRNLVKIISSCSNND--FKALVL 836 (1049)
Q Consensus 761 ~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~--~~~lv~ 836 (1049)
++|++.+.||+|+||+||+|+.. +++.||+|+++... ....+.+.+|++++++++||||+++++++...+ ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 46889999999999999999965 58999999997543 345678889999999999999999999987655 779999
Q ss_pred eccCCCChhhhhhcCCC--ccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeee----cCCCceEEecccCcee
Q 039290 837 EYMSNGSLEKCLYSDNY--FLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLL----NESMVGHLSDFGIAKI 910 (1049)
Q Consensus 837 e~~~~g~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~----~~~~~~kl~DfGla~~ 910 (1049)
||+++++|.+++..... .+++.+++.++.|+++||+||| +.||+||||||+||++ +.++.+||+|||+++.
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~ 165 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (319)
T ss_dssp ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEE
T ss_pred eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEeccCCCCceEEEccCCCcee
Confidence 99999999999976443 3899999999999999999999 9999999999999999 7788899999999987
Q ss_pred cCCCccccccccccccCcccccccC--------CCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhc--c
Q 039290 911 LGKEESMRQTKTLGTIGYMAPEYGR--------EGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDS--L 980 (1049)
Q Consensus 911 ~~~~~~~~~~~~~~~~~y~aPE~~~--------~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~--~ 980 (1049)
...... .....||+.|+|||++. +..++.++||||+||++|||++|+.||................. .
T Consensus 166 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 243 (319)
T 4euu_A 166 LEDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGK 243 (319)
T ss_dssp CCTTCC--BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHC
T ss_pred cCCCCc--eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCC
Confidence 754432 23456899999999875 46789999999999999999999999975433222211111100 0
Q ss_pred ccCCcchhccc---c--cccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHH
Q 039290 981 LSCSITEVADA---N--LLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIR 1040 (1049)
Q Consensus 981 ~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~ 1040 (1049)
....+..+... . ...............+..+.+++.+||+.||++|||++|++++..+..
T Consensus 244 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 244 PSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp CTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred CcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 11111110000 0 000111112334677888999999999999999999999999988653
No 75
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.4e-39 Score=363.66 Aligned_cols=253 Identities=25% Similarity=0.372 Sum_probs=207.4
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeeccc-CCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEEe
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEF-DGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVLE 837 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 837 (1049)
.++|++.+.||+|+||+||+|+.. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+++..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 467999999999999999999965 78999999996543 2234678899999999999999999999999999999999
Q ss_pred ccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCc-c
Q 039290 838 YMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEE-S 916 (1049)
Q Consensus 838 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~-~ 916 (1049)
|+++|+|.+++.... .+++.+++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||++..+.... .
T Consensus 86 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 161 (323)
T 3tki_A 86 YCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (323)
T ss_dssp CCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred cCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence 999999999987654 4899999999999999999999 9999999999999999999999999999998664322 1
Q ss_pred ccccccccccCcccccccCCCCc-CcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhccccccc
Q 039290 917 MRQTKTLGTIGYMAPEYGREGKV-SRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLLN 995 (1049)
Q Consensus 917 ~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1049)
.......||+.|+|||++.+..+ +.++||||+||++|||++|+.||............|......
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~-------------- 227 (323)
T 3tki_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-------------- 227 (323)
T ss_dssp CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTT--------------
T ss_pred cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhccccc--------------
Confidence 22334678999999999987665 788999999999999999999998654443444433321110
Q ss_pred ccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 996 CEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 996 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
......++.++.+++.+||+.||++|||++|++++
T Consensus 228 -----~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 228 -----LNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp -----STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -----CCccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 01112345678899999999999999999999876
No 76
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=3.8e-40 Score=377.88 Aligned_cols=259 Identities=22% Similarity=0.284 Sum_probs=211.7
Q ss_pred HHHHHHhcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeeccc---CCCHHHHHHHHHHHhhcCCCceeeEEeeeecC
Q 039290 754 QDLLRATDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEF---DGSLESFHAECKVMGSIRHRNLVKIISSCSNN 829 (1049)
Q Consensus 754 ~~~~~~~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~ 829 (1049)
.++....++|++.++||+|+||+||+|+.. +++.||+|+++... ....+.+.+|+++++.++||||+++++++.+.
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 344445678999999999999999999965 68899999997532 33445688999999999999999999999999
Q ss_pred CeeEEEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCce
Q 039290 830 DFKALVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAK 909 (1049)
Q Consensus 830 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~ 909 (1049)
+..|+||||+++|+|.+++... .+++..++.++.||+.||+||| ++||+||||||+||+++.++.+||+|||+++
T Consensus 142 ~~~~lV~E~~~gg~L~~~l~~~--~~~e~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFG~a~ 216 (410)
T 3v8s_A 142 RYLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCM 216 (410)
T ss_dssp SEEEEEECCCTTEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CEEEEEEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeeECCCCCEEEeccceeE
Confidence 9999999999999999998764 4899999999999999999999 9999999999999999999999999999998
Q ss_pred ecCCCccccccccccccCcccccccCCCC----cCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCc
Q 039290 910 ILGKEESMRQTKTLGTIGYMAPEYGREGK----VSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSI 985 (1049)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~----~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 985 (1049)
.............+||+.|+|||++.+.. ++.++||||+||++|||++|+.||......+.......+..
T Consensus 217 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~------ 290 (410)
T 3v8s_A 217 KMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKN------ 290 (410)
T ss_dssp ECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHH------
T ss_pred eeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccc------
Confidence 87655444445678999999999987655 78999999999999999999999975322211111100000
Q ss_pred chhcccccccccccCchhhHHHHHHHHHHHhhccccCCCC--CCCHHHHHHH
Q 039290 986 TEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEK--RISMKDVANR 1035 (1049)
Q Consensus 986 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rpt~~ell~~ 1035 (1049)
...++.....+.++.+++.+|++.+|.+ ||+++|+++|
T Consensus 291 ------------~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 291 ------------SLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp ------------HCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred ------------cccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 0001111234567899999999999999 9999999987
No 77
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=9.3e-40 Score=358.19 Aligned_cols=260 Identities=23% Similarity=0.384 Sum_probs=201.8
Q ss_pred hcCCCCCceecCCCcEEEEEEEeCC----CcEEEEEEeecccC-CCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEE
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLPD----GMEIAAKVFHMEFD-GSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKAL 834 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~~----~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 834 (1049)
.++|++.+.||+|+||.||+|+... +..||+|+++.... ...+.+.+|+.++++++||||+++++++. ++..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l 92 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 92 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence 4578899999999999999999643 45699999865432 23567899999999999999999999985 456799
Q ss_pred EEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCC
Q 039290 835 VLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKE 914 (1049)
Q Consensus 835 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~ 914 (1049)
||||+++++|.+++......+++.+++.++.|+++||+||| +.||+||||||+||+++.++.+||+|||++......
T Consensus 93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 169 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 169 (281)
T ss_dssp EEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC----------
T ss_pred EEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHEEECCCCCEEECccccccccCcc
Confidence 99999999999999877767999999999999999999999 999999999999999999999999999999876544
Q ss_pred ccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCCccccccchHHHhhhhccccCCcchhccccc
Q 039290 915 ESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFT-KKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANL 993 (1049)
Q Consensus 915 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1049)
.........+++.|+|||++.+..++.++||||+||++|||++ |..||......+.. ..+...
T Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~--~~i~~~-------------- 233 (281)
T 1mp8_A 170 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI--GRIENG-------------- 233 (281)
T ss_dssp ---------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHH--HHHHTT--------------
T ss_pred cccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHH--HHHHcC--------------
Confidence 3333334456789999999988899999999999999999997 99999764332211 111000
Q ss_pred ccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhhh
Q 039290 994 LNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETLS 1044 (1049)
Q Consensus 994 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~~ 1044 (1049)
.+...+..++..+.+++.+||+.||++|||++|++++|+++.++..
T Consensus 234 -----~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 279 (281)
T 1mp8_A 234 -----ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK 279 (281)
T ss_dssp -----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred -----CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhc
Confidence 0011123456788999999999999999999999999999987643
No 78
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.9e-39 Score=361.76 Aligned_cols=251 Identities=22% Similarity=0.281 Sum_probs=207.6
Q ss_pred cCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccCC------CHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeE
Q 039290 761 DGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFDG------SLESFHAECKVMGSIRHRNLVKIISSCSNNDFKA 833 (1049)
Q Consensus 761 ~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~ 833 (1049)
++|++.+.||+|+||.||+|+.. +++.||+|+++..... ..+.+.+|++++++++||||+++++++.+.+..+
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 90 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 45889999999999999999965 6899999999765321 3578999999999999999999999999999999
Q ss_pred EEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCC----ceEEecccCce
Q 039290 834 LVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESM----VGHLSDFGIAK 909 (1049)
Q Consensus 834 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~----~~kl~DfGla~ 909 (1049)
+||||+++++|.+++.... .+++.+++.++.|++.||+||| +.||+||||||+||+++.++ .+||+|||++.
T Consensus 91 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~ 166 (326)
T 2y0a_A 91 LILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166 (326)
T ss_dssp EEEECCCSCBHHHHHTTSS-CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEEcCCCCCHHHHHHhcC-CcCHHHHHHHHHHHHHHHHHHH---HCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCe
Confidence 9999999999999987654 5899999999999999999999 99999999999999998877 89999999998
Q ss_pred ecCCCccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhc
Q 039290 910 ILGKEESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVA 989 (1049)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 989 (1049)
....... .....||+.|+|||++.+..++.++||||+||++|||++|..||......+.. ......
T Consensus 167 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~-~~~~~~----------- 232 (326)
T 2y0a_A 167 KIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL-ANVSAV----------- 232 (326)
T ss_dssp ECCTTSC--CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHH-HHHHHT-----------
T ss_pred ECCCCCc--cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHH-HHHHhc-----------
Confidence 7753332 23457899999999999889999999999999999999999999753222111 110000
Q ss_pred ccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 990 DANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 990 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
...........++..+.+++.+||+.||++|||++|+++|
T Consensus 233 ------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 233 ------NYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp ------CCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred ------CCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0000111123356778999999999999999999999986
No 79
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=8.2e-40 Score=372.39 Aligned_cols=269 Identities=23% Similarity=0.373 Sum_probs=216.8
Q ss_pred cHHHHHHHhcCCCCCceecCCCcEEEEEEEe------CCCcEEEEEEeecccC-CCHHHHHHHHHHHhhc-CCCceeeEE
Q 039290 752 SYQDLLRATDGFSENKLLGMGSFGSVYKGVL------PDGMEIAAKVFHMEFD-GSLESFHAECKVMGSI-RHRNLVKII 823 (1049)
Q Consensus 752 ~~~~~~~~~~~~~~~~~lg~G~fg~Vy~a~~------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~hpniv~l~ 823 (1049)
...++....++|++.+.||+|+||.||+|++ .+++.||||+++.... ...+.+.+|++++.++ +||||++++
T Consensus 13 ~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~ 92 (359)
T 3vhe_A 13 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 92 (359)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred CcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeee
Confidence 3445555678899999999999999999973 3567899999975432 2346789999999999 799999999
Q ss_pred eeeecCC-eeEEEEeccCCCChhhhhhcCCC-------------------------------------------------
Q 039290 824 SSCSNND-FKALVLEYMSNGSLEKCLYSDNY------------------------------------------------- 853 (1049)
Q Consensus 824 ~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~------------------------------------------------- 853 (1049)
+++.+.+ ..++||||+++|+|.+++.....
T Consensus 93 ~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (359)
T 3vhe_A 93 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKS 172 (359)
T ss_dssp EEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------------
T ss_pred eeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccc
Confidence 9988755 48999999999999999876432
Q ss_pred ----------------ccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCcc-
Q 039290 854 ----------------FLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEES- 916 (1049)
Q Consensus 854 ----------------~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~~- 916 (1049)
.+++..++.++.|+++||+||| ++||+||||||+||+++.++.+||+|||+++.......
T Consensus 173 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 249 (359)
T 3vhe_A 173 LSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 249 (359)
T ss_dssp -----------CTTTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTC
T ss_pred cchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccc
Confidence 2889999999999999999999 99999999999999999999999999999986643322
Q ss_pred ccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCCccccccchHHHhhhhccccCCcchhccccccc
Q 039290 917 MRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFT-KKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLLN 995 (1049)
Q Consensus 917 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1049)
.......+|+.|+|||++.+..++.++||||+||++|||++ |..||......+..........
T Consensus 250 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~---------------- 313 (359)
T 3vhe_A 250 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT---------------- 313 (359)
T ss_dssp EEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTC----------------
T ss_pred hhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCC----------------
Confidence 23344568889999999988899999999999999999998 9999976433322222111100
Q ss_pred ccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhh
Q 039290 996 CEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETL 1043 (1049)
Q Consensus 996 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~ 1043 (1049)
....+..++.++.+++.+||+.||++|||++|++++|+++.++.
T Consensus 314 ----~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 357 (359)
T 3vhe_A 314 ----RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 357 (359)
T ss_dssp ----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ----CCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHHh
Confidence 01111234567899999999999999999999999999998764
No 80
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=4.9e-39 Score=356.38 Aligned_cols=264 Identities=23% Similarity=0.391 Sum_probs=205.8
Q ss_pred hcCCCCCceecCCCcEEEEEEEeCCCcEEEEEEeecccCCCHHHHHHHHHHHhh--cCCCceeeEEeeeec----CCeeE
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLPDGMEIAAKVFHMEFDGSLESFHAECKVMGS--IRHRNLVKIISSCSN----NDFKA 833 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~hpniv~l~~~~~~----~~~~~ 833 (1049)
.++|++.+.||+|+||+||+|+. +++.||||++... ....+.+|.+++.. ++||||+++++++.+ .+..+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 45799999999999999999998 7899999998654 34566677777776 789999999998644 35689
Q ss_pred EEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHcc-----CCCCeEEcCCCCCCeeecCCCceEEecccCc
Q 039290 834 LVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFG-----YSTPIVHCDIKPSNVLLNESMVGHLSDFGIA 908 (1049)
Q Consensus 834 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~-----~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla 908 (1049)
+||||+++|+|.+++... .+++..+++++.|+++|++|||.. ++++|+||||||+||+++.++.+||+|||++
T Consensus 83 lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a 160 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQLT--TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA 160 (301)
T ss_dssp EEECCCTTCBHHHHHTTC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred EehhhccCCCHHHHHhhc--ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCe
Confidence 999999999999999643 589999999999999999999932 2679999999999999999999999999999
Q ss_pred eecCCCccc---cccccccccCcccccccCCC------CcCcccchHHHHHHHHHHHhC----------CCCCCcccccc
Q 039290 909 KILGKEESM---RQTKTLGTIGYMAPEYGREG------KVSRKCDVYSYGIMLMETFTK----------KKPTDEIFAGE 969 (1049)
Q Consensus 909 ~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~------~~~~~~DvwslG~il~elltg----------~~p~~~~~~~~ 969 (1049)
+........ ......||+.|+|||++.+. .++.++||||+||++|||++| ..||.......
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~ 240 (301)
T 3q4u_A 161 VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPND 240 (301)
T ss_dssp EEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCC
Confidence 866433321 12334789999999998776 556799999999999999999 77776644443
Q ss_pred chHHHhhhhccccCCcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 039290 970 MSLKRWVGDSLLSCSITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRI 1039 (1049)
Q Consensus 970 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i 1039 (1049)
.................. .........++.++.+++.+||+.||++|||++|+++.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 241 PSFEDMRKVVCVDQQRPN----------IPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp CCHHHHHHHHTTSCCCCC----------CCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred cchhhhhHHHhccCCCCC----------CChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 333222211111100000 000112235678899999999999999999999999999876
No 81
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=2e-39 Score=359.81 Aligned_cols=263 Identities=26% Similarity=0.427 Sum_probs=208.1
Q ss_pred hcCCCCCceecCCCcEEEEEEEeCCCcEEEEEEeecccC--CCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEEe
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLPDGMEIAAKVFHMEFD--GSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVLE 837 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 837 (1049)
.++|++.+.||+|+||+||+|+... .+|+|+++.... ...+.+.+|++++++++||||+++++++.. +..++|||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~~--~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~lv~e 111 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEECC--EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CcEEEEEe
Confidence 4689999999999999999998643 689998875432 234678899999999999999999998764 45789999
Q ss_pred ccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCC-cc
Q 039290 838 YMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKE-ES 916 (1049)
Q Consensus 838 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~-~~ 916 (1049)
|+++++|.+++......+++.+++.++.|+++||+||| +.||+||||||+||+++.++.+||+|||++...... ..
T Consensus 112 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~ 188 (307)
T 3lb7_A 112 WCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp CCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCSSSEEECTTSCEEECCCCSSCC-------
T ss_pred cCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCChhhEEEcCCCCEEEccCCCceeccccccc
Confidence 99999999999877778999999999999999999999 999999999999999999999999999999865431 12
Q ss_pred ccccccccccCcccccccC---CCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhccccc
Q 039290 917 MRQTKTLGTIGYMAPEYGR---EGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANL 993 (1049)
Q Consensus 917 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1049)
.......||+.|+|||++. +..++.++||||+||++|||++|+.||......+........ .......
T Consensus 189 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~-~~~~~~~-------- 259 (307)
T 3lb7_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGR-GYASPDL-------- 259 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHH-TCCCCCS--------
T ss_pred ccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhc-CCCCcch--------
Confidence 2233457899999999885 567889999999999999999999999764332222111111 1100000
Q ss_pred ccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhhh
Q 039290 994 LNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETLS 1044 (1049)
Q Consensus 994 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~~ 1044 (1049)
......+++.+.+++.+||+.+|++||++.|++++|+.+...+.
T Consensus 260 -------~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~p 303 (307)
T 3lb7_A 260 -------SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP 303 (307)
T ss_dssp -------TTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred -------hhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhcc
Confidence 01112356789999999999999999999999999999887654
No 82
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=6.2e-39 Score=355.03 Aligned_cols=266 Identities=16% Similarity=0.169 Sum_probs=217.3
Q ss_pred hcCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeecccCCCHHHHHHHHHHHhhc-CCCceeeEEeeeecCCeeEEEEe
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEFDGSLESFHAECKVMGSI-RHRNLVKIISSCSNNDFKALVLE 837 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e 837 (1049)
.++|++.+.||+|+||.||+|+. .+++.||+|++.... ..+.+.+|+++++.+ +|++++++++++.+.+..++|||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 35799999999999999999995 578999999986543 335688999999999 79999999999999999999999
Q ss_pred ccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCc-----eEEecccCceecC
Q 039290 838 YMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMV-----GHLSDFGIAKILG 912 (1049)
Q Consensus 838 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~-----~kl~DfGla~~~~ 912 (1049)
|+ +++|.+++...+..+++.+++.++.|+++|++||| ++||+||||||+||+++.++. +||+|||+++...
T Consensus 87 ~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~ 162 (298)
T 1csn_A 87 LL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR 162 (298)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred ec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccc
Confidence 99 99999999887767999999999999999999999 999999999999999987765 9999999998765
Q ss_pred CCccc------cccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchH-HHhhhhccccCCc
Q 039290 913 KEESM------RQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSL-KRWVGDSLLSCSI 985 (1049)
Q Consensus 913 ~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~-~~~~~~~~~~~~~ 985 (1049)
..... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.......... ...........
T Consensus 163 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-- 240 (298)
T 1csn_A 163 DPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQST-- 240 (298)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHS--
T ss_pred cccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCc--
Confidence 43221 2234568999999999999899999999999999999999999998643222111 11000000000
Q ss_pred chhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhhhhc
Q 039290 986 TEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETLSAY 1046 (1049)
Q Consensus 986 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~~~~ 1046 (1049)
........+++++.+++.+||+.||++||+++++++.|+++.+++...
T Consensus 241 -------------~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~~ 288 (298)
T 1csn_A 241 -------------PLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTT 288 (298)
T ss_dssp -------------CHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred -------------cHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCCC
Confidence 000111235678999999999999999999999999999999887654
No 83
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.2e-39 Score=364.64 Aligned_cols=248 Identities=22% Similarity=0.341 Sum_probs=205.9
Q ss_pred hcCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeeccc---CCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEE
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEF---DGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALV 835 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 835 (1049)
.++|.+.+.||+|+||+||+|+. .+++.||+|++.... ......+.+|+++++.++||||+++++++.+.+..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 46799999999999999999996 578999999986542 33456889999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCc
Q 039290 836 LEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEE 915 (1049)
Q Consensus 836 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~ 915 (1049)
|||+ +|+|.+++...+ .+++.+++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||++.......
T Consensus 88 ~E~~-~g~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~ 162 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEKK-RMTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN 162 (336)
T ss_dssp ECCC-CEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB
T ss_pred EECC-CCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCc
Confidence 9999 678988887654 4899999999999999999999 9999999999999999999999999999998764433
Q ss_pred cccccccccccCcccccccCCCCc-CcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhcccccc
Q 039290 916 SMRQTKTLGTIGYMAPEYGREGKV-SRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLL 994 (1049)
Q Consensus 916 ~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1049)
......||+.|+|||++.+..+ ++++||||+||++|+|++|+.||......+... .
T Consensus 163 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~------------------~--- 219 (336)
T 3h4j_B 163 --FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFK------------------K--- 219 (336)
T ss_dssp --TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBC------------------C---
T ss_pred --ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHH------------------H---
Confidence 2334578999999999988776 689999999999999999999997532221100 0
Q ss_pred cccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 039290 995 NCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRL 1036 (1049)
Q Consensus 995 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L 1036 (1049)
........+...+.++.+++.+||+.||.+|||++|++++-
T Consensus 220 -i~~~~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp 260 (336)
T 3h4j_B 220 -VNSCVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDP 260 (336)
T ss_dssp -CCSSCCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCH
T ss_pred -HHcCCCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhCh
Confidence 00011112223456789999999999999999999999873
No 84
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1.5e-39 Score=360.68 Aligned_cols=272 Identities=22% Similarity=0.383 Sum_probs=211.3
Q ss_pred cCCCCCceecCCCcEEEEEEEe-----CCCcEEEEEEeeccc-CCCHHHHHHHHHHHhhcCCCceeeEEeeeecC--Cee
Q 039290 761 DGFSENKLLGMGSFGSVYKGVL-----PDGMEIAAKVFHMEF-DGSLESFHAECKVMGSIRHRNLVKIISSCSNN--DFK 832 (1049)
Q Consensus 761 ~~~~~~~~lg~G~fg~Vy~a~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~--~~~ 832 (1049)
.+|+..+.||+|+||.||+|++ .+++.||+|+++... ....+.+.+|++++++++||||+++++++.+. +..
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 3588889999999999999983 468899999997543 34567899999999999999999999999876 668
Q ss_pred EEEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecC
Q 039290 833 ALVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILG 912 (1049)
Q Consensus 833 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~ 912 (1049)
++||||+++|+|.+++......+++.+++.++.|++.|++||| ++||+||||||+||+++.++.+||+|||++....
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 177 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 177 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhh---cCCcccCCCchheEEEcCCCCEEECccccccccc
Confidence 9999999999999999776667999999999999999999999 9999999999999999999999999999998775
Q ss_pred CCcc--ccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhcc
Q 039290 913 KEES--MRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVAD 990 (1049)
Q Consensus 913 ~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1049)
.... .......+|..|+|||++.+..++.++||||+|+++|||++|..|+...... ...................
T Consensus 178 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~ 254 (302)
T 4e5w_A 178 TDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMAL---FLKMIGPTHGQMTVTRLVN 254 (302)
T ss_dssp TTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHH---HHHHHCSCCGGGHHHHHHH
T ss_pred CCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhH---HhhccCCcccccCHHHHHH
Confidence 4432 2223456788899999998889999999999999999999999986532111 0000000000000000000
Q ss_pred cccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHH
Q 039290 991 ANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRE 1041 (1049)
Q Consensus 991 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~ 1041 (1049)
.+ ....+...+..++.++.+++.+||+.||++|||++|+++.|+++.+
T Consensus 255 -~~--~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll~ 302 (302)
T 4e5w_A 255 -TL--KEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALLK 302 (302)
T ss_dssp -HH--HTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred -HH--hccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhC
Confidence 00 0011122233466789999999999999999999999999998763
No 85
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=3.8e-39 Score=362.06 Aligned_cols=263 Identities=20% Similarity=0.210 Sum_probs=214.3
Q ss_pred cCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeecccCCCHHHHHHHHHHHhhc-CCCceeeEEeeeecCCeeEEEEec
Q 039290 761 DGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEFDGSLESFHAECKVMGSI-RHRNLVKIISSCSNNDFKALVLEY 838 (1049)
Q Consensus 761 ~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~ 838 (1049)
++|++.+.||+|+||+||+|+. .+++.||||++.... ..+.+.+|+++++++ +||||+++++++.+.+..++||||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~ 86 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLEL 86 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEEC
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEe
Confidence 5789999999999999999995 578999999987543 235688999999999 899999999999999999999999
Q ss_pred cCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCc-----eEEecccCceecCC
Q 039290 839 MSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMV-----GHLSDFGIAKILGK 913 (1049)
Q Consensus 839 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~-----~kl~DfGla~~~~~ 913 (1049)
+ +++|.+++...+..+++.+++.++.|+++||+||| +.||+||||||+||+++.++. +||+|||+++.+..
T Consensus 87 ~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~ 162 (330)
T 2izr_A 87 L-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYID 162 (330)
T ss_dssp C-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBC
T ss_pred C-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeec
Confidence 9 89999999876667999999999999999999999 999999999999999998876 99999999987643
Q ss_pred Cccc------cccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchH-HHhhhhccccCCcc
Q 039290 914 EESM------RQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSL-KRWVGDSLLSCSIT 986 (1049)
Q Consensus 914 ~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~-~~~~~~~~~~~~~~ 986 (1049)
.... ......||+.|+|||++.+..++.++||||+||++|||++|+.||......+... ...+.......
T Consensus 163 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~--- 239 (330)
T 2izr_A 163 PETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRAT--- 239 (330)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHS---
T ss_pred CCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccC---
Confidence 3221 1234678999999999999999999999999999999999999998643222211 11100000000
Q ss_pred hhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhhhh
Q 039290 987 EVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETLSA 1045 (1049)
Q Consensus 987 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~~~ 1045 (1049)
+ .......++ ++.+++.+||+.||.+||+++++++.|+++.++...
T Consensus 240 ----------~--~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~~ 285 (330)
T 2izr_A 240 ----------P--IEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGY 285 (330)
T ss_dssp ----------C--HHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred ----------C--HHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCC
Confidence 0 000001234 899999999999999999999999999999887654
No 86
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.1e-39 Score=360.81 Aligned_cols=267 Identities=25% Similarity=0.391 Sum_probs=206.8
Q ss_pred HhcCCCCCceecCCCcEEEEEEEeCCCcEEEEEEeecccCCCHHHHHHHHHHHhhc--CCCceeeEEeeeecC----Cee
Q 039290 759 ATDGFSENKLLGMGSFGSVYKGVLPDGMEIAAKVFHMEFDGSLESFHAECKVMGSI--RHRNLVKIISSCSNN----DFK 832 (1049)
Q Consensus 759 ~~~~~~~~~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l--~hpniv~l~~~~~~~----~~~ 832 (1049)
..++|++.+.||+|+||.||+|+.. ++.||||++... ....+.+|.+++... +||||+++++++.+. +..
T Consensus 35 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 110 (337)
T 3mdy_A 35 IAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQL 110 (337)
T ss_dssp HHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEE
T ss_pred cccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCce
Confidence 3568999999999999999999984 899999998643 234556666666654 899999999999876 788
Q ss_pred EEEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCC--------CeEEcCCCCCCeeecCCCceEEec
Q 039290 833 ALVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYST--------PIVHCDIKPSNVLLNESMVGHLSD 904 (1049)
Q Consensus 833 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~--------~ivH~Dlkp~NIl~~~~~~~kl~D 904 (1049)
++||||+++|+|.+++... .+++.+++.++.|++.||+||| +. ||+||||||+||+++.++.+||+|
T Consensus 111 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~D 185 (337)
T 3mdy_A 111 YLITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLH---TEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIAD 185 (337)
T ss_dssp EEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHH---SCBCSTTCBCCEECSCCCGGGEEECTTSCEEECC
T ss_pred EEEEeccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHH---HhhhhhccCCCEEecccchHHEEECCCCCEEEEe
Confidence 9999999999999999765 4899999999999999999999 77 999999999999999999999999
Q ss_pred ccCceecCCCccc---cccccccccCcccccccCCCCcCcc------cchHHHHHHHHHHHhC----------CCCCCcc
Q 039290 905 FGIAKILGKEESM---RQTKTLGTIGYMAPEYGREGKVSRK------CDVYSYGIMLMETFTK----------KKPTDEI 965 (1049)
Q Consensus 905 fGla~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~------~DvwslG~il~elltg----------~~p~~~~ 965 (1049)
||++......... ......||+.|+|||++.+...+.+ +||||+||++|||++| ..||...
T Consensus 186 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~ 265 (337)
T 3mdy_A 186 LGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDL 265 (337)
T ss_dssp CTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTT
T ss_pred CCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhh
Confidence 9999876543321 1224578999999999987666554 9999999999999999 5555543
Q ss_pred ccccchHHHhhhhccccCCcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhhh
Q 039290 966 FAGEMSLKRWVGDSLLSCSITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETLS 1044 (1049)
Q Consensus 966 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~~ 1044 (1049)
.........+....... ....... .......++.++.+++.+||+.||++|||++|++++|+++.++..
T Consensus 266 ~~~~~~~~~~~~~~~~~---------~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 334 (337)
T 3mdy_A 266 VPSDPSYEDMREIVCIK---------KLRPSFP-NRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQD 334 (337)
T ss_dssp SCSSCCHHHHHHHHTTS---------CCCCCCC-GGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTTT
T ss_pred cCCCCchhhhHHHHhhh---------ccCcccc-ccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhcc
Confidence 33332222221111000 0000001 111224678899999999999999999999999999999988654
No 87
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.7e-39 Score=357.52 Aligned_cols=270 Identities=22% Similarity=0.271 Sum_probs=205.4
Q ss_pred cCCCCCceecCCCcEEEEEEEeCCCcEEEEEEeeccc--CCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEEec
Q 039290 761 DGFSENKLLGMGSFGSVYKGVLPDGMEIAAKVFHMEF--DGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVLEY 838 (1049)
Q Consensus 761 ~~~~~~~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 838 (1049)
++|++.+.||+|+||+||+|+..+++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 5788999999999999999999889999999996543 23357788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCcccc
Q 039290 839 MSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEESMR 918 (1049)
Q Consensus 839 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~~~~ 918 (1049)
+++ +|.+++......+++.+++.++.|+++||+||| ++||+||||||+||+++.++.+||+|||++........ .
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~ 156 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR-K 156 (288)
T ss_dssp CSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred cCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEeECccccccCcccc-c
Confidence 976 999998877667999999999999999999999 99999999999999999999999999999986643221 2
Q ss_pred ccccccccCcccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhc-cccCCcchh-----ccc
Q 039290 919 QTKTLGTIGYMAPEYGRE-GKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDS-LLSCSITEV-----ADA 991 (1049)
Q Consensus 919 ~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~-----~~~ 991 (1049)
.....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||......+.....+.... .....+... .++
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (288)
T 1ob3_A 157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDP 236 (288)
T ss_dssp -----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCT
T ss_pred cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccccccc
Confidence 234568999999999865 4589999999999999999999999976433222111111000 000000000 000
Q ss_pred cccccccc-CchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 992 NLLNCEEN-DFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 992 ~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
........ ........+.++.+++.+||+.||++|||++|+++|
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 237 NFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp TCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00000000 001112346778999999999999999999999875
No 88
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-39 Score=370.10 Aligned_cols=253 Identities=23% Similarity=0.301 Sum_probs=209.8
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEEec
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVLEY 838 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 838 (1049)
.++|++.+.||+|+||.||+|... +++.||+|++..........+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 457999999999999999999964 7889999999765444456789999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecC--CCceEEecccCceecCCCcc
Q 039290 839 MSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNE--SMVGHLSDFGIAKILGKEES 916 (1049)
Q Consensus 839 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~--~~~~kl~DfGla~~~~~~~~ 916 (1049)
+++|+|.+++......+++.+++.++.||+.||+||| +.||+||||||+||+++. .+.+||+|||+++.......
T Consensus 130 ~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~ 206 (387)
T 1kob_A 130 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI 206 (387)
T ss_dssp CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC
T ss_pred CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccchHHeEEecCCCCceEEEecccceecCCCcc
Confidence 9999999999877667999999999999999999999 999999999999999974 57899999999997754332
Q ss_pred ccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhcccccccc
Q 039290 917 MRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLLNC 996 (1049)
Q Consensus 917 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1049)
.....||+.|+|||++.+..++.++||||+||++|||++|..||......+. .........
T Consensus 207 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~-~~~i~~~~~---------------- 267 (387)
T 1kob_A 207 --VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLET-LQNVKRCDW---------------- 267 (387)
T ss_dssp --EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH-HHHHHHCCC----------------
T ss_pred --eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHH-HHHHHhCCC----------------
Confidence 2335689999999999998999999999999999999999999976322111 111100000
Q ss_pred cccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 997 EENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 997 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
.........++.++.+++.+||+.||++|||++|++++
T Consensus 268 -~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 268 -EFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp -CCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred -CCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 00001112345678999999999999999999999986
No 89
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=9.2e-40 Score=377.55 Aligned_cols=263 Identities=19% Similarity=0.241 Sum_probs=214.0
Q ss_pred HHHHHHHhcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeeccc---CCCHHHHHHHHHHHhhcCCCceeeEEeeeec
Q 039290 753 YQDLLRATDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEF---DGSLESFHAECKVMGSIRHRNLVKIISSCSN 828 (1049)
Q Consensus 753 ~~~~~~~~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~ 828 (1049)
+.++....++|++.++||+|+||+||+|+.. +++.||+|+++... ....+.+.+|+.++..++||||+++++++.+
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 3445555788999999999999999999965 57889999997532 2334558899999999999999999999999
Q ss_pred CCeeEEEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCc
Q 039290 829 NDFKALVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIA 908 (1049)
Q Consensus 829 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla 908 (1049)
.+..++||||+++|+|.+++......+++..++.++.|++.||+||| +.||+||||||+|||++.++.+||+|||+|
T Consensus 146 ~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILl~~~g~vkL~DFGla 222 (437)
T 4aw2_A 146 DNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSC 222 (437)
T ss_dssp SSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeeEcCCCCEEEcchhhh
Confidence 99999999999999999999876667999999999999999999999 999999999999999999999999999999
Q ss_pred eecCCCccccccccccccCcccccccC-----CCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccC
Q 039290 909 KILGKEESMRQTKTLGTIGYMAPEYGR-----EGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSC 983 (1049)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 983 (1049)
+.............+||+.|+|||++. ...++.++||||+||++|||++|+.||......+...........
T Consensus 223 ~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~--- 299 (437)
T 4aw2_A 223 LKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKER--- 299 (437)
T ss_dssp EECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHH---
T ss_pred hhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhcccc---
Confidence 877655444445568999999999986 567899999999999999999999999763322221111000000
Q ss_pred CcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCC--CCCHHHHHHH
Q 039290 984 SITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEK--RISMKDVANR 1035 (1049)
Q Consensus 984 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rpt~~ell~~ 1035 (1049)
...+ ......++++.+++.+|+..+|++ ||+++|+++|
T Consensus 300 ----------~~~p----~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 300 ----------FQFP----TQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp ----------CCCC----SSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred ----------ccCC----cccccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 0000 000124567899999999999988 9999999886
No 90
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=4.6e-39 Score=354.80 Aligned_cols=270 Identities=21% Similarity=0.243 Sum_probs=206.6
Q ss_pred cCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccC--CCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEEe
Q 039290 761 DGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFD--GSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVLE 837 (1049)
Q Consensus 761 ~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 837 (1049)
++|++.+.||+|+||+||+|+.. +++.||+|+++.... ...+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 57889999999999999999964 689999999976543 234778899999999999999999999999999999999
Q ss_pred ccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCccc
Q 039290 838 YMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEESM 917 (1049)
Q Consensus 838 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~~~ 917 (1049)
|+++ ++.+.+......+++.+++.++.|++.|++||| ++||+||||||+||+++.++.+||+|||++........
T Consensus 82 ~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 156 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR- 156 (292)
T ss_dssp CCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCS-
T ss_pred cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceecCCccc-
Confidence 9976 666666665667999999999999999999999 99999999999999999999999999999987653322
Q ss_pred cccccccccCcccccccCCCC-cCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccc--cCCcchhcc---c
Q 039290 918 RQTKTLGTIGYMAPEYGREGK-VSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLL--SCSITEVAD---A 991 (1049)
Q Consensus 918 ~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~---~ 991 (1049)
......+|+.|+|||++.+.. ++.++||||+||++|||++|..||................... ...+..... .
T Consensus 157 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 236 (292)
T 3o0g_A 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDY 236 (292)
T ss_dssp CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTC
T ss_pred cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccc
Confidence 233457899999999987765 7999999999999999999888864322222222221111100 000000000 0
Q ss_pred ---ccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 992 ---NLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 992 ---~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
................+.++.+++.+|++.||++|||++|+++|
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 237 KPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp CCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 00000001111223456778999999999999999999999876
No 91
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.7e-39 Score=367.42 Aligned_cols=252 Identities=21% Similarity=0.307 Sum_probs=205.9
Q ss_pred cCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeeccc-----CCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEE
Q 039290 761 DGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEF-----DGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKAL 834 (1049)
Q Consensus 761 ~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 834 (1049)
++|++.+.||+|+||+||+|+. .+++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 103 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM 103 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 4689999999999999999996 478999999986432 2246789999999999999999999999999999999
Q ss_pred EEeccCCCChhhhhhcC---CCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCc---eEEecccCc
Q 039290 835 VLEYMSNGSLEKCLYSD---NYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMV---GHLSDFGIA 908 (1049)
Q Consensus 835 v~e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~---~kl~DfGla 908 (1049)
||||+++++|.+.+... ...+++..++.++.||++||+||| +++|+||||||+||+++.++. +||+|||++
T Consensus 104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a 180 (351)
T 3c0i_A 104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA 180 (351)
T ss_dssp EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChHHeEEecCCCCCcEEEecCcce
Confidence 99999999998877543 335899999999999999999999 999999999999999986554 999999999
Q ss_pred eecCCCccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchh
Q 039290 909 KILGKEESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEV 988 (1049)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 988 (1049)
........ ......||+.|+|||++.+..++.++||||+||++|||++|..||..... .........
T Consensus 181 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~i~~~---------- 247 (351)
T 3c0i_A 181 IQLGESGL-VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE--RLFEGIIKG---------- 247 (351)
T ss_dssp EECCTTSC-BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH--HHHHHHHHT----------
T ss_pred eEecCCCe-eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH--HHHHHHHcC----------
Confidence 87754332 23345789999999999988999999999999999999999999976311 111111100
Q ss_pred cccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 989 ADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 989 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
............+.++.+++.+||+.||++|||+.|+++|
T Consensus 248 -------~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 248 -------KYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp -------CCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred -------CCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0000111122356789999999999999999999999976
No 92
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=376.90 Aligned_cols=347 Identities=22% Similarity=0.252 Sum_probs=234.8
Q ss_pred ceEEeccCccCCCCCCcccCCCCCccEEEcCCCCCCCCCCccccCCCCCceeecccCccccCcccccccccccceeeccc
Q 039290 298 KELAVTDNDLLGSLPSSIDLGLPNLERLFLGENNFSGTIPSSLTNISELSVLDFGFNSFSGLIPTTFGNLRSLKLLSLAG 377 (1049)
Q Consensus 298 ~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 377 (1049)
+.++.+++++. .+|..+. ++++.|+|++|++++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 14 ~~v~c~~~~l~-~ip~~~~---~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 89 (477)
T 2id5_A 14 RAVLCHRKRFV-AVPEGIP---TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRS 89 (477)
T ss_dssp TEEECCSCCCS-SCCSCCC---TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-cCCCCCC---CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCC
Confidence 46777777776 6777654 5788999999999887788899999999999999999988888899999999999999
Q ss_pred ccccCCCCCcccccccccCCCCcEEEccCCccccCCCCccccccccccEEEccCCccccCCCCCCCCCCCccEEEccCCc
Q 039290 378 NVLTSPTPDLSFLSSLTSCRNLEIIYLSENPINGILPSSIGNFSISMKSLSMESCNISGGIPKELGNINNLTVIRLGNNE 457 (1049)
Q Consensus 378 N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~ 457 (1049)
|.++.++.. .|.++++|++|+|++|++.+..+ ..|.++++|+.|+|++|.
T Consensus 90 n~l~~~~~~-----~~~~l~~L~~L~Ls~n~i~~~~~-------------------------~~~~~l~~L~~L~l~~n~ 139 (477)
T 2id5_A 90 NRLKLIPLG-----VFTGLSNLTKLDISENKIVILLD-------------------------YMFQDLYNLKSLEVGDND 139 (477)
T ss_dssp SCCCSCCTT-----SSTTCTTCCEEECTTSCCCEECT-------------------------TTTTTCTTCCEEEECCTT
T ss_pred CcCCccCcc-----cccCCCCCCEEECCCCccccCCh-------------------------hHccccccCCEEECCCCc
Confidence 888877654 25667777777777777665444 445555555566666665
Q ss_pred ccccCCccccCcCCCcceEeeccccCCCCCcccccccccceEEeeCcccCCcCchhccCcccCCceeecCcccccccCcc
Q 039290 458 LTGTIPVTLGRLQKLQGLYLQNNKLEGSIPEDLCHLYRLANLYLGDNKLSGRLPACLGNLTSLRDLSLGSNALTSIIPST 537 (1049)
Q Consensus 458 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 537 (1049)
+++..|..|.++++|++|+|++|++++..+..+..+++|+.|++++|.+.+..+..|..+++|+.|++++|.+.+.+|..
T Consensus 140 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~ 219 (477)
T 2id5_A 140 LVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPN 219 (477)
T ss_dssp CCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTT
T ss_pred cceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcc
Confidence 55555555556666666666666665444445555666666666666665555555666666666666666555555555
Q ss_pred cccccccccccccCCccCCCCccCcCCCcceeEeecccccccccccccccCCCcccEEEeecccccCCccccccCccCCc
Q 039290 538 LWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALSGVIPVTIGGLQGLQLLSLRYNRLQGPIPESFGGLKSLN 617 (1049)
Q Consensus 538 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 617 (1049)
.....+|+.|++++|+++...+..+..+++|++|+|++|.+++..+..|.++++|+.|+|++|++++..|..|.++++|+
T Consensus 220 ~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 299 (477)
T 2id5_A 220 CLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLR 299 (477)
T ss_dssp TTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCC
T ss_pred cccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCC
Confidence 55555666666666666654445566666777777777777766666677777777777777777776677777777777
Q ss_pred EEeccCccccCCcccccccccccceeeccCCcccccCCCCCCccccccccccCCccccCCC
Q 039290 618 FVDMSNNNLSGTIPKSMEALSYLKHLNLSFNQLEGEIPTRGPFITFSAESFLGNQALCGSP 678 (1049)
Q Consensus 618 ~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~cg~~ 678 (1049)
+|+|++|++++..+..|..+++|+.|++++|+|.|.++..+.+.......+.++...|+.|
T Consensus 300 ~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p 360 (477)
T 2id5_A 300 VLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATP 360 (477)
T ss_dssp EEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEES
T ss_pred EEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccchHhHHhhhhccccCccCceeCCc
Confidence 7777777777655566677777777777777777766542222222223455566666555
No 93
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=2.2e-39 Score=363.20 Aligned_cols=261 Identities=25% Similarity=0.410 Sum_probs=207.1
Q ss_pred cCCCCCceecCCCcEEEEEEEeC-CCcE----EEEEEeeccc-CCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEE
Q 039290 761 DGFSENKLLGMGSFGSVYKGVLP-DGME----IAAKVFHMEF-DGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKAL 834 (1049)
Q Consensus 761 ~~~~~~~~lg~G~fg~Vy~a~~~-~~~~----vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 834 (1049)
++|+..+.||+|+||+||+|++. +++. ||+|.++... ....+++.+|+.++++++||||+++++++.+.+ .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~ 93 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence 46888999999999999999954 4443 5788775433 345678999999999999999999999998765 689
Q ss_pred EEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCC
Q 039290 835 VLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKE 914 (1049)
Q Consensus 835 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~ 914 (1049)
|+||+.+|+|.+++......+++..++.++.|+++||+||| +++|+||||||+||+++.++.+||+|||+++.....
T Consensus 94 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 170 (327)
T 3poz_A 94 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp EEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTT
T ss_pred EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCChheEEECCCCCEEEccCcceeEccCC
Confidence 99999999999999887778999999999999999999999 999999999999999999999999999999876543
Q ss_pred ccc-cccccccccCcccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCCccccccchHHHhhhhccccCCcchhcccc
Q 039290 915 ESM-RQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFT-KKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADAN 992 (1049)
Q Consensus 915 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 992 (1049)
... ......+|+.|+|||++.+..++.++||||+||++|||++ |+.||......+.. ......
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~--~~~~~~------------- 235 (327)
T 3poz_A 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS--SILEKG------------- 235 (327)
T ss_dssp CC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHH--HHHHTT-------------
T ss_pred cccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHH--HHHHcC-------------
Confidence 322 2223456789999999999999999999999999999999 99999764333221 111100
Q ss_pred cccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhhhhc
Q 039290 993 LLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETLSAY 1046 (1049)
Q Consensus 993 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~~~~ 1046 (1049)
.+...+..++.++.+++.+||+.||++|||+.|++++|+++.+....+
T Consensus 236 ------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~~~~~ 283 (327)
T 3poz_A 236 ------ERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRY 283 (327)
T ss_dssp ------CCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTSHHHH
T ss_pred ------CCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhhhhhh
Confidence 001112235567899999999999999999999999999988755444
No 94
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1.9e-39 Score=369.95 Aligned_cols=258 Identities=21% Similarity=0.256 Sum_probs=204.1
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeeccc---CCCHHHHHHHHHHHhhc-CCCceeeEEeeeecCCeeEE
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEF---DGSLESFHAECKVMGSI-RHRNLVKIISSCSNNDFKAL 834 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~~l 834 (1049)
.++|++.++||+|+||+||+|+.. +++.||+|+++... ....+.+.+|..++.++ +||||+++++++.+.+..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 457899999999999999999965 67889999997653 22345688899999887 89999999999999999999
Q ss_pred EEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCC
Q 039290 835 VLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKE 914 (1049)
Q Consensus 835 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~ 914 (1049)
||||+++|+|.+++...+ .+++..++.++.||+.||+||| ++||+||||||+||+++.++.+||+|||+++.....
T Consensus 131 V~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 206 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 206 (396)
T ss_dssp EEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEcCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEECCCCCEEEeecceeeecccC
Confidence 999999999999987654 4899999999999999999999 999999999999999999999999999999863322
Q ss_pred ccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhcccccc
Q 039290 915 ESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLL 994 (1049)
Q Consensus 915 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1049)
. ......+||+.|+|||++.+..++.++||||+||++|||++|+.||......+...... ...+....
T Consensus 207 ~-~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~---------~~~~~~~i-- 274 (396)
T 4dc2_A 207 G-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNT---------EDYLFQVI-- 274 (396)
T ss_dssp T-CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CC---------HHHHHHHH--
T ss_pred C-CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhh---------HHHHHHHH--
Confidence 2 22345679999999999999999999999999999999999999996532221110000 00000000
Q ss_pred cccccCchhhHHHHHHHHHHHhhccccCCCCCCCH------HHHHHH
Q 039290 995 NCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISM------KDVANR 1035 (1049)
Q Consensus 995 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~------~ell~~ 1035 (1049)
.......+...+.++.+++.+||+.||++||++ +|+++|
T Consensus 275 --~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~H 319 (396)
T 4dc2_A 275 --LEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 319 (396)
T ss_dssp --HHCCCCCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHS
T ss_pred --hccccCCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcC
Confidence 001111223356778999999999999999995 577665
No 95
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1.1e-39 Score=368.01 Aligned_cols=249 Identities=22% Similarity=0.291 Sum_probs=202.8
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeeccc---CCCHHHHHHHHHHHhhc-CCCceeeEEeeeecCCeeEE
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEF---DGSLESFHAECKVMGSI-RHRNLVKIISSCSNNDFKAL 834 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~~l 834 (1049)
.++|++.+.||+|+||+||+|+.. +++.||+|+++... ....+.+.+|.++++.+ +||||+++++++.+.+..|+
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 468999999999999999999964 68999999997542 34557788999999988 69999999999999999999
Q ss_pred EEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCC
Q 039290 835 VLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKE 914 (1049)
Q Consensus 835 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~ 914 (1049)
||||+++|+|.+++...+ .+++.+++.++.||+.||+||| ++||+||||||+||+++.++.+||+|||+++.....
T Consensus 102 v~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~ 177 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQKSR-RFDEARARFYAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN 177 (353)
T ss_dssp EEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC-
T ss_pred EEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCCHHHEEECCCCCEEEccccceeecccC
Confidence 999999999999987654 4899999999999999999999 999999999999999999999999999999854322
Q ss_pred ccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhcccccc
Q 039290 915 ESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLL 994 (1049)
Q Consensus 915 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1049)
. .......||+.|+|||++.+..++.++||||+||++|||++|+.||......+..... ..
T Consensus 178 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i-~~----------------- 238 (353)
T 3txo_A 178 G-VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAI-LN----------------- 238 (353)
T ss_dssp ---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH-HH-----------------
T ss_pred C-ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHH-Hc-----------------
Confidence 2 2334467999999999998888999999999999999999999999763322211111 00
Q ss_pred cccccCchhhHHHHHHHHHHHhhccccCCCCCCCH------HHHHHH
Q 039290 995 NCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISM------KDVANR 1035 (1049)
Q Consensus 995 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~------~ell~~ 1035 (1049)
.....+...+.++.+++.+|++.||++||++ +|+++|
T Consensus 239 ----~~~~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~h 281 (353)
T 3txo_A 239 ----DEVVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRH 281 (353)
T ss_dssp ----CCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTS
T ss_pred ----CCCCCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhC
Confidence 0011112245678999999999999999998 778765
No 96
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=2.8e-39 Score=375.04 Aligned_cols=253 Identities=20% Similarity=0.295 Sum_probs=205.8
Q ss_pred hcCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeecccC--CCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEE
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEFD--GSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVL 836 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 836 (1049)
.++|++.+.||+|+||+||+|.. .+|+.||+|++..... ...+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~ 89 (444)
T 3soa_A 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIF 89 (444)
T ss_dssp HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEE
T ss_pred cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEE
Confidence 45799999999999999999985 4789999999975432 23467889999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeec---CCCceEEecccCceecCC
Q 039290 837 EYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLN---ESMVGHLSDFGIAKILGK 913 (1049)
Q Consensus 837 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~---~~~~~kl~DfGla~~~~~ 913 (1049)
||+++|+|.+.+.... .+++.++..++.||++|++||| ++||+||||||+||+++ .++.+||+|||++.....
T Consensus 90 E~~~gg~L~~~i~~~~-~~~e~~~~~i~~qil~aL~~lH---~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~ 165 (444)
T 3soa_A 90 DLVTGGELFEDIVARE-YYSEADASHCIQQILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG 165 (444)
T ss_dssp CCCBCCBHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCT
T ss_pred EeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecC
Confidence 9999999999987765 4899999999999999999999 99999999999999998 467899999999987654
Q ss_pred CccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhccccc
Q 039290 914 EESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANL 993 (1049)
Q Consensus 914 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1049)
... ......||+.|+|||++.+..++.++||||+||++|+|++|..||......+.. ........
T Consensus 166 ~~~-~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~-~~i~~~~~------------- 230 (444)
T 3soa_A 166 EQQ-AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLY-QQIKAGAY------------- 230 (444)
T ss_dssp TCC-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH-HHHHHTCC-------------
T ss_pred CCc-eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHH-HHHHhCCC-------------
Confidence 332 223467999999999999889999999999999999999999999753222111 11110000
Q ss_pred ccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 994 LNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 994 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
....+....+++++.+++.+|++.||++|||++|+++|
T Consensus 231 ----~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 231 ----DFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp ----CCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ----CCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 00001112345678999999999999999999999986
No 97
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-39 Score=368.36 Aligned_cols=266 Identities=26% Similarity=0.423 Sum_probs=213.4
Q ss_pred HHhcCCCCCceecCCCcEEEEEEEeC------CCcEEEEEEeecccC-CCHHHHHHHHHHHhhcCCCceeeEEeeeecCC
Q 039290 758 RATDGFSENKLLGMGSFGSVYKGVLP------DGMEIAAKVFHMEFD-GSLESFHAECKVMGSIRHRNLVKIISSCSNND 830 (1049)
Q Consensus 758 ~~~~~~~~~~~lg~G~fg~Vy~a~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~ 830 (1049)
...++|++.+.||+|+||.||+|+.. +++.||+|+++.... ...+.+.+|++++++++||||+++++++.+.+
T Consensus 44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 123 (343)
T 1luf_A 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGK 123 (343)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred ecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC
Confidence 34578999999999999999999964 347899999975432 23567899999999999999999999999999
Q ss_pred eeEEEEeccCCCChhhhhhcCC-----------------------CccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCC
Q 039290 831 FKALVLEYMSNGSLEKCLYSDN-----------------------YFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDI 887 (1049)
Q Consensus 831 ~~~lv~e~~~~g~L~~~l~~~~-----------------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dl 887 (1049)
..++||||+++|+|.+++.... ..+++.+++.++.|+++||+||| ++||+||||
T Consensus 124 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dl 200 (343)
T 1luf_A 124 PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDL 200 (343)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCC
T ss_pred ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCC
Confidence 9999999999999999987642 46899999999999999999999 999999999
Q ss_pred CCCCeeecCCCceEEecccCceecCCCcc-ccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCCcc
Q 039290 888 KPSNVLLNESMVGHLSDFGIAKILGKEES-MRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFT-KKKPTDEI 965 (1049)
Q Consensus 888 kp~NIl~~~~~~~kl~DfGla~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~ 965 (1049)
||+||+++.++.+||+|||++........ .......+++.|+|||++.+..++.++||||+||++|||++ |..||...
T Consensus 201 kp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 280 (343)
T 1luf_A 201 ATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM 280 (343)
T ss_dssp SGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred CcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCC
Confidence 99999999999999999999986643322 12234567889999999988899999999999999999999 99999763
Q ss_pred ccccchHHHhhhhccccCCcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhhhh
Q 039290 966 FAGEMSLKRWVGDSLLSCSITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETLSA 1045 (1049)
Q Consensus 966 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~~~ 1045 (1049)
...+.. ..+. +... ...+..++.++.+++.+||+.||++|||++|++++|+++.++...
T Consensus 281 ~~~~~~--~~~~------------~~~~-------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~~~ 339 (343)
T 1luf_A 281 AHEEVI--YYVR------------DGNI-------LACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAEG 339 (343)
T ss_dssp CHHHHH--HHHH------------TTCC-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC----
T ss_pred ChHHHH--HHHh------------CCCc-------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhhhh
Confidence 322211 1110 0000 011123566799999999999999999999999999999887654
Q ss_pred cc
Q 039290 1046 YI 1047 (1049)
Q Consensus 1046 ~~ 1047 (1049)
-+
T Consensus 340 ~~ 341 (343)
T 1luf_A 340 TV 341 (343)
T ss_dssp --
T ss_pred hc
Confidence 43
No 98
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.3e-39 Score=369.81 Aligned_cols=261 Identities=25% Similarity=0.427 Sum_probs=213.8
Q ss_pred hcCCCCCceecCCCcEEEEEEEe--------CCCcEEEEEEeecccC-CCHHHHHHHHHHHhhc-CCCceeeEEeeeecC
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVL--------PDGMEIAAKVFHMEFD-GSLESFHAECKVMGSI-RHRNLVKIISSCSNN 829 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~--------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~ 829 (1049)
.++|.+.+.||+|+||+||+|+. .++..||+|+++.... ...+++.+|+++++++ +||||+++++++.+.
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 35788999999999999999985 2345799999975532 2346788999999999 899999999999999
Q ss_pred CeeEEEEeccCCCChhhhhhcCC---------------CccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeee
Q 039290 830 DFKALVLEYMSNGSLEKCLYSDN---------------YFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLL 894 (1049)
Q Consensus 830 ~~~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~ 894 (1049)
+..++||||+++|+|.+++.... ..+++.+++.++.|+++||+||| +.||+||||||+||++
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCcceEEE
Confidence 99999999999999999997654 35899999999999999999999 9999999999999999
Q ss_pred cCCCceEEecccCceecCCCcc-ccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCCccccccchH
Q 039290 895 NESMVGHLSDFGIAKILGKEES-MRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFT-KKKPTDEIFAGEMSL 972 (1049)
Q Consensus 895 ~~~~~~kl~DfGla~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~ 972 (1049)
+.++.+||+|||+++....... .......+|+.|+|||++.+..++.++||||+||++|||++ |..||......+.
T Consensus 225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~-- 302 (382)
T 3tt0_A 225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL-- 302 (382)
T ss_dssp CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH--
T ss_pred cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHH--
Confidence 9999999999999987654332 22233456889999999999999999999999999999999 9999875332211
Q ss_pred HHhhhhccccCCcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhhh
Q 039290 973 KRWVGDSLLSCSITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETLS 1044 (1049)
Q Consensus 973 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~~ 1044 (1049)
...+.... +...+..++.++.+++.+||+.||++|||++|++++|+++.....
T Consensus 303 ~~~~~~~~-------------------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~ 355 (382)
T 3tt0_A 303 FKLLKEGH-------------------RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTS 355 (382)
T ss_dssp HHHHHTTC-------------------CCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSC
T ss_pred HHHHHcCC-------------------CCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHh
Confidence 11111000 011112355679999999999999999999999999999987543
No 99
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1.1e-38 Score=350.89 Aligned_cols=252 Identities=25% Similarity=0.421 Sum_probs=207.1
Q ss_pred cCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeecccCCC-------HHHHHHHHHHHhhcCCCceeeEEeeeecCCee
Q 039290 761 DGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEFDGS-------LESFHAECKVMGSIRHRNLVKIISSCSNNDFK 832 (1049)
Q Consensus 761 ~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~~~~-------~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~ 832 (1049)
++|++.+.||+|+||+||+|+. .+++.||+|++....... .+.+.+|++++++++||||+++++++.+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 5788899999999999999996 478999999986544222 267899999999999999999999997665
Q ss_pred EEEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCC--eEEcCCCCCCeeecCCCc-----eEEecc
Q 039290 833 ALVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTP--IVHCDIKPSNVLLNESMV-----GHLSDF 905 (1049)
Q Consensus 833 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~Dlkp~NIl~~~~~~-----~kl~Df 905 (1049)
++||||+++|+|.+++......+++..++.++.|++.|++||| +.+ |+||||||+||+++.++. +||+||
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Df 173 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ---NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173 (287)
T ss_dssp EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCC
T ss_pred eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHH---hCCCCeecCCCCcceEEEeccCCCCceeEEeCCC
Confidence 6999999999999999887778999999999999999999999 889 999999999999987776 999999
Q ss_pred cCceecCCCccccccccccccCccccccc--CCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccC
Q 039290 906 GIAKILGKEESMRQTKTLGTIGYMAPEYG--REGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSC 983 (1049)
Q Consensus 906 Gla~~~~~~~~~~~~~~~~~~~y~aPE~~--~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 983 (1049)
|+++.... ......+|+.|+|||++ ....++.++||||+||++|||++|+.||......+...........
T Consensus 174 g~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~--- 246 (287)
T 4f0f_A 174 GLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEG--- 246 (287)
T ss_dssp TTCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSC---
T ss_pred Cccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccC---
Confidence 99985433 22345689999999998 4456789999999999999999999999765444332222211110
Q ss_pred CcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 039290 984 SITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRI 1039 (1049)
Q Consensus 984 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i 1039 (1049)
.+...+..++.++.+++.+||+.||++|||++|+++.|+++
T Consensus 247 ---------------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 247 ---------------LRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp ---------------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred ---------------CCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 01111234567899999999999999999999999999853
No 100
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=1.7e-39 Score=380.59 Aligned_cols=257 Identities=26% Similarity=0.436 Sum_probs=213.3
Q ss_pred hcCCCCCceecCCCcEEEEEEEeCCCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEEecc
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLPDGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVLEYM 839 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 839 (1049)
.++|++.+.||+|+||+||+|++.++..||||+++... ...+.+.+|++++++++||||+++++++. .+..++||||+
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~ 264 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFM 264 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCC
T ss_pred hHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeec
Confidence 45688889999999999999999889999999997543 45788999999999999999999999987 56789999999
Q ss_pred CCCChhhhhhcCC-CccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCcccc
Q 039290 840 SNGSLEKCLYSDN-YFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEESMR 918 (1049)
Q Consensus 840 ~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~~~~ 918 (1049)
++|+|.+++.... ..+++.++..++.||++||+||| +++|+||||||+||+++.++.+||+|||+++.........
T Consensus 265 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~ 341 (454)
T 1qcf_A 265 AKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTA 341 (454)
T ss_dssp TTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHT
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceec
Confidence 9999999997543 35788999999999999999999 9999999999999999999999999999998764433222
Q ss_pred ccccccccCcccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCCccccccchHHHhhhhccccCCcchhccccccccc
Q 039290 919 QTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFT-KKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLLNCE 997 (1049)
Q Consensus 919 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1049)
.....++..|+|||++....++.++|||||||++|||++ |+.||......+.. ..+...
T Consensus 342 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~--~~i~~~------------------ 401 (454)
T 1qcf_A 342 REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI--RALERG------------------ 401 (454)
T ss_dssp TCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH--HHHHHT------------------
T ss_pred cCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHH--HHHHcC------------------
Confidence 233446788999999988899999999999999999999 99999764322211 111000
Q ss_pred ccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHh
Q 039290 998 ENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRET 1042 (1049)
Q Consensus 998 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~ 1042 (1049)
.+.+.+..++.++.++|.+||+.||++|||++++++.|+++..+
T Consensus 402 -~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~ 445 (454)
T 1qcf_A 402 -YRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA 445 (454)
T ss_dssp -CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred -CCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence 01112234677899999999999999999999999999987654
No 101
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.4e-39 Score=373.35 Aligned_cols=262 Identities=23% Similarity=0.279 Sum_probs=211.8
Q ss_pred HHHHHHHhcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeeccc---CCCHHHHHHHHHHHhhcCCCceeeEEeeeec
Q 039290 753 YQDLLRATDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEF---DGSLESFHAECKVMGSIRHRNLVKIISSCSN 828 (1049)
Q Consensus 753 ~~~~~~~~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~ 828 (1049)
+.+.....++|++.+.||+|+||+||+|+.. +++.||+|+++... ....+.+.+|.+++..++||||+++++++.+
T Consensus 53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 132 (412)
T 2vd5_A 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD 132 (412)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence 3444455688999999999999999999964 79999999997532 2234568899999999999999999999999
Q ss_pred CCeeEEEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCc
Q 039290 829 NDFKALVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIA 908 (1049)
Q Consensus 829 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla 908 (1049)
.+..|+||||+++|+|.+++...+..+++..++.++.||+.||+||| +.||+||||||+||+++.++.+||+|||++
T Consensus 133 ~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILld~~g~vkL~DFGla 209 (412)
T 2vd5_A 133 ENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHIRLADFGSC 209 (412)
T ss_dssp SSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccCHHHeeecCCCCEEEeechhh
Confidence 99999999999999999999876667999999999999999999999 999999999999999999999999999999
Q ss_pred eecCCCccccccccccccCcccccccC-------CCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccc
Q 039290 909 KILGKEESMRQTKTLGTIGYMAPEYGR-------EGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLL 981 (1049)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~y~aPE~~~-------~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 981 (1049)
+.............+||+.|+|||++. ...++.++||||+||++|||++|+.||......+... .......
T Consensus 210 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~-~i~~~~~- 287 (412)
T 2vd5_A 210 LKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYG-KIVHYKE- 287 (412)
T ss_dssp EECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH-HHHTHHH-
T ss_pred eeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHH-HHHhccc-
Confidence 887654443444568999999999986 4578999999999999999999999997633222111 1110000
Q ss_pred cCCcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCC---CCHHHHHHH
Q 039290 982 SCSITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKR---ISMKDVANR 1035 (1049)
Q Consensus 982 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---pt~~ell~~ 1035 (1049)
. . ........++.++.+++.+|+. +|++| |+++|+++|
T Consensus 288 ---------~--~----~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 288 ---------H--L----SLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp ---------H--C----CCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred ---------C--c----CCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 0 0 0001112356789999999999 99998 599999876
No 102
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-39 Score=367.06 Aligned_cols=262 Identities=25% Similarity=0.367 Sum_probs=211.0
Q ss_pred HhcCCCCCceecCCCcEEEEEEEe------CCCcEEEEEEeeccc-CCCHHHHHHHHHHHhhc-CCCceeeEEeeeecCC
Q 039290 759 ATDGFSENKLLGMGSFGSVYKGVL------PDGMEIAAKVFHMEF-DGSLESFHAECKVMGSI-RHRNLVKIISSCSNND 830 (1049)
Q Consensus 759 ~~~~~~~~~~lg~G~fg~Vy~a~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~ 830 (1049)
..++|++.+.||+|+||.||+|+. .++..||+|+++... ....+.+.+|+++++++ +||||+++++++.+.+
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 456899999999999999999995 245689999997543 33457899999999999 8999999999999999
Q ss_pred eeEEEEeccCCCChhhhhhcCCC----------------------ccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCC
Q 039290 831 FKALVLEYMSNGSLEKCLYSDNY----------------------FLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIK 888 (1049)
Q Consensus 831 ~~~lv~e~~~~g~L~~~l~~~~~----------------------~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk 888 (1049)
..++||||+++|+|.+++..... .+++.+++.++.|+++||+||| ++||+|||||
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dik 199 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLA 199 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEETTCS
T ss_pred ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCC
Confidence 99999999999999999976543 3789999999999999999999 9999999999
Q ss_pred CCCeeecCCCceEEecccCceecCCCccc-cccccccccCcccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCCccc
Q 039290 889 PSNVLLNESMVGHLSDFGIAKILGKEESM-RQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFT-KKKPTDEIF 966 (1049)
Q Consensus 889 p~NIl~~~~~~~kl~DfGla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~ 966 (1049)
|+||+++.++.+||+|||++......... ......+|+.|+|||++.+..++.++||||+||++|||++ |..||....
T Consensus 200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 279 (344)
T 1rjb_A 200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP 279 (344)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence 99999999999999999999866433321 2234557889999999988899999999999999999998 999997643
Q ss_pred cccchHHHhhhhccccCCcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhh
Q 039290 967 AGEMSLKRWVGDSLLSCSITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETL 1043 (1049)
Q Consensus 967 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~ 1043 (1049)
..+... ....... ....+..++.++.+++.+||+.||.+|||++|++++|+.+.+..
T Consensus 280 ~~~~~~-~~~~~~~-------------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 336 (344)
T 1rjb_A 280 VDANFY-KLIQNGF-------------------KMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADA 336 (344)
T ss_dssp CSHHHH-HHHHTTC-------------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred cHHHHH-HHHhcCC-------------------CCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHH
Confidence 322211 1111000 01111234567999999999999999999999999999887654
No 103
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=6.2e-39 Score=356.73 Aligned_cols=246 Identities=24% Similarity=0.313 Sum_probs=207.2
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeeccc---CCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEE
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEF---DGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALV 835 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 835 (1049)
.++|++.+.||+|+||+||+|+.. +|+.||+|+++... ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 357889999999999999999964 78999999997542 34567888999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCc
Q 039290 836 LEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEE 915 (1049)
Q Consensus 836 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~ 915 (1049)
|||+++|+|.+++.... .+++..++.++.||+.||+||| ++||+||||||+||+++.++.+||+|||+++.....
T Consensus 85 ~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~- 159 (318)
T 1fot_A 85 MDYIEGGELFSLLRKSQ-RFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV- 159 (318)
T ss_dssp ECCCCSCBHHHHHHHTS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC-
T ss_pred EeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChheEEEcCCCCEEEeecCcceecCCc-
Confidence 99999999999998754 4899999999999999999999 999999999999999999999999999999876432
Q ss_pred cccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhccccccc
Q 039290 916 SMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLLN 995 (1049)
Q Consensus 916 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1049)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||......+. ...... .
T Consensus 160 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~i~~-------------~---- 218 (318)
T 1fot_A 160 ---TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKT-YEKILN-------------A---- 218 (318)
T ss_dssp ---BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHHHH-------------C----
T ss_pred ---cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH-HHHHHh-------------C----
Confidence 2345789999999999999999999999999999999999999975322111 111100 0
Q ss_pred ccccCchhhHHHHHHHHHHHhhccccCCCCCC-----CHHHHHHH
Q 039290 996 CEENDFSAREQCVSSIFSLAMDCTVDLPEKRI-----SMKDVANR 1035 (1049)
Q Consensus 996 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----t~~ell~~ 1035 (1049)
....+...+.++.+++.+|++.||++|| +++|+++|
T Consensus 219 ----~~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 219 ----ELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp ----CCCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred ----CCCCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 0011123456789999999999999999 89999876
No 104
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=6.7e-39 Score=374.87 Aligned_cols=252 Identities=30% Similarity=0.446 Sum_probs=209.8
Q ss_pred hcCCCCCceecCCCcEEEEEEEeCCCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCceeeEEeeeecCC-eeEEEEec
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLPDGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRNLVKIISSCSNND-FKALVLEY 838 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~-~~~lv~e~ 838 (1049)
.++|++.+.||+|+||.||+|++. ++.||||+++... ..+.+.+|++++++++||||+++++++.+.+ ..++||||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~ 268 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 268 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEEC
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEe
Confidence 457888999999999999999984 7899999997543 4578999999999999999999999987655 78999999
Q ss_pred cCCCChhhhhhcCCC-ccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCccc
Q 039290 839 MSNGSLEKCLYSDNY-FLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEESM 917 (1049)
Q Consensus 839 ~~~g~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~~~ 917 (1049)
+++|+|.+++...+. .+++..++.++.|+++||+||| +++|+||||||+||+++.++.+||+|||+++......
T Consensus 269 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~-- 343 (450)
T 1k9a_A 269 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-- 343 (450)
T ss_dssp CTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEECCCCCEEEeeCCCcccccccc--
Confidence 999999999987544 4689999999999999999999 9999999999999999999999999999998653221
Q ss_pred cccccccccCcccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCCccccccchHHHhhhhccccCCcchhcccccccc
Q 039290 918 RQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFT-KKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLLNC 996 (1049)
Q Consensus 918 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1049)
....+++.|+|||++.+..++.++|||||||++|||++ |+.||......+... . +..
T Consensus 344 --~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~-~-i~~------------------ 401 (450)
T 1k9a_A 344 --DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVP-R-VEK------------------ 401 (450)
T ss_dssp -----CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHH-H-HHT------------------
T ss_pred --cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH-H-HHc------------------
Confidence 22356889999999999999999999999999999998 999997643322211 1 100
Q ss_pred cccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHh
Q 039290 997 EENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRET 1042 (1049)
Q Consensus 997 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~ 1042 (1049)
..+...+..++.++.++|.+||+.||++|||+.++++.|+++...
T Consensus 402 -~~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 402 -GYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp -TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred -CCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 001122234677899999999999999999999999999998764
No 105
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.7e-39 Score=364.54 Aligned_cols=275 Identities=23% Similarity=0.305 Sum_probs=213.7
Q ss_pred cCCCCCceecCCCcEEEEEEEe-----CCCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCceeeEEeeee--cCCeeE
Q 039290 761 DGFSENKLLGMGSFGSVYKGVL-----PDGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRNLVKIISSCS--NNDFKA 833 (1049)
Q Consensus 761 ~~~~~~~~lg~G~fg~Vy~a~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~--~~~~~~ 833 (1049)
++|++.+.||+|+||.||+|++ .+++.||+|++........+.+.+|++++++++||||+++++++. +.+..+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 4688899999999999999983 468899999997665555677999999999999999999999886 456789
Q ss_pred EEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCC
Q 039290 834 LVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGK 913 (1049)
Q Consensus 834 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~ 913 (1049)
+||||+++++|.+++...+..+++.+++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||++.....
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~ 179 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPL 179 (327)
T ss_dssp EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCGGGCEECCT
T ss_pred EEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChhhEEECCCCCEEEcccccceeccc
Confidence 999999999999999876667999999999999999999999 99999999999999999999999999999987754
Q ss_pred Cccc--cccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhccc
Q 039290 914 EESM--RQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADA 991 (1049)
Q Consensus 914 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 991 (1049)
.... ......+++.|+|||++.+..++.++||||+||++|||++|+.||............+.. .......+.+.
T Consensus 180 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 256 (327)
T 3lxl_A 180 DKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCER---DVPALSRLLEL 256 (327)
T ss_dssp TCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC-------CCHHHHHHHH
T ss_pred CCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhccccc---ccccHHHHHHH
Confidence 3321 223345788899999998888999999999999999999999998653221111000000 00000000000
Q ss_pred ccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhhh
Q 039290 992 NLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETLS 1044 (1049)
Q Consensus 992 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~~ 1044 (1049)
+ ....+...+..++.++.+++.+||+.||++|||++|++++|+++.....
T Consensus 257 -~--~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~ 306 (327)
T 3lxl_A 257 -L--EEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR 306 (327)
T ss_dssp -H--HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-----
T ss_pred -h--hcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 0 0011122234567789999999999999999999999999998876544
No 106
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=3.7e-39 Score=367.09 Aligned_cols=247 Identities=23% Similarity=0.326 Sum_probs=200.9
Q ss_pred CceecCCCcEEEEEEEe-CCCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEEeccCCCCh
Q 039290 766 NKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVLEYMSNGSL 844 (1049)
Q Consensus 766 ~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g~L 844 (1049)
.+.||+|+||.||+|+. .+|+.||+|+++.......+.+.+|++++++++||||+++++++.+.+..++||||+++++|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 56899999999999995 47899999999865544567899999999999999999999999999999999999999999
Q ss_pred hhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeee--cCCCceEEecccCceecCCCcccccccc
Q 039290 845 EKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLL--NESMVGHLSDFGIAKILGKEESMRQTKT 922 (1049)
Q Consensus 845 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~--~~~~~~kl~DfGla~~~~~~~~~~~~~~ 922 (1049)
.+++......+++.+++.++.||++||+||| +.+|+||||||+||++ +.++.+||+|||+++....... ....
T Consensus 174 ~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~--~~~~ 248 (373)
T 2x4f_A 174 FDRIIDESYNLTELDTILFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK--LKVN 248 (373)
T ss_dssp HHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB--CCCC
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc--cccc
Confidence 9998877667999999999999999999999 9999999999999999 5678999999999997754332 2335
Q ss_pred ccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhcccccccccccCch
Q 039290 923 LGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLLNCEENDFS 1002 (1049)
Q Consensus 923 ~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1049)
.||+.|+|||++.+..++.++||||+||++|||++|..||......+. ......... .....
T Consensus 249 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-~~~i~~~~~-----------------~~~~~ 310 (373)
T 2x4f_A 249 FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAET-LNNILACRW-----------------DLEDE 310 (373)
T ss_dssp CSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHHHHTCC-----------------CSCSG
T ss_pred cCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhccC-----------------CCChh
Confidence 689999999999988999999999999999999999999976332211 111111000 00011
Q ss_pred hhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 1003 AREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 1003 ~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
....+++++.+++.+|++.||++|||++|++++
T Consensus 311 ~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 311 EFQDISEEAKEFISKLLIKEKSWRISASEALKH 343 (373)
T ss_dssp GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred hhccCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 112346778999999999999999999999986
No 107
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=4.5e-39 Score=358.86 Aligned_cols=264 Identities=23% Similarity=0.364 Sum_probs=216.4
Q ss_pred hcCCCCCceecCCCcEEEEEEEe------CCCcEEEEEEeecccC-CCHHHHHHHHHHHhhc-CCCceeeEEeeeecCCe
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVL------PDGMEIAAKVFHMEFD-GSLESFHAECKVMGSI-RHRNLVKIISSCSNNDF 831 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~ 831 (1049)
.++|+..+.||+|+||.||+|++ .+++.||+|+++.... ...+.+.+|+++++++ +||||+++++++.+.+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 45788999999999999999984 3567899999975432 2356789999999999 89999999999999999
Q ss_pred eEEEEeccCCCChhhhhhcCCC-----------------ccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeee
Q 039290 832 KALVLEYMSNGSLEKCLYSDNY-----------------FLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLL 894 (1049)
Q Consensus 832 ~~lv~e~~~~g~L~~~l~~~~~-----------------~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~ 894 (1049)
.++||||+++|+|.+++..... .+++.+++.++.|+++|++||| ++||+||||||+||++
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~ 178 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILL 178 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEE
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEEE
Confidence 9999999999999999976543 4899999999999999999999 9999999999999999
Q ss_pred cCCCceEEecccCceecCCCccc-cccccccccCcccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCCccccccchH
Q 039290 895 NESMVGHLSDFGIAKILGKEESM-RQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFT-KKKPTDEIFAGEMSL 972 (1049)
Q Consensus 895 ~~~~~~kl~DfGla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~ 972 (1049)
+.++.+||+|||++......... ......+++.|+|||++.+..++.++||||+||++|||++ |..||..........
T Consensus 179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~ 258 (313)
T 1t46_A 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY 258 (313)
T ss_dssp ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHH
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHH
Confidence 99999999999999876544322 2233456789999999988899999999999999999999 999997643322211
Q ss_pred HHhhhhccccCCcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhhhhc
Q 039290 973 KRWVGDSLLSCSITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETLSAY 1046 (1049)
Q Consensus 973 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~~~~ 1046 (1049)
.... ... +...+..++.++.+++.+||+.||++|||++|++++|+++..+..+.
T Consensus 259 ~~~~-~~~-------------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~ 312 (313)
T 1t46_A 259 KMIK-EGF-------------------RMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTNH 312 (313)
T ss_dssp HHHH-HTC-------------------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTCC-
T ss_pred HHhc-cCC-------------------CCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHhhcC
Confidence 1111 000 00111234567899999999999999999999999999998876553
No 108
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=4.3e-39 Score=359.20 Aligned_cols=259 Identities=23% Similarity=0.398 Sum_probs=213.3
Q ss_pred hcCCCCCceecCCCcEEEEEEEe------CCCcEEEEEEeecccC-CCHHHHHHHHHHHhhcCCCceeeEEeeeecCCee
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVL------PDGMEIAAKVFHMEFD-GSLESFHAECKVMGSIRHRNLVKIISSCSNNDFK 832 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~ 832 (1049)
.++|.+.+.||+|+||.||+|+. .+++.||+|+++.... ...+.+.+|++++++++||||+++++++.+.+..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 45788899999999999999985 3457899999975432 2346788999999999999999999999999999
Q ss_pred EEEEeccCCCChhhhhhcCC-----------------------CccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCC
Q 039290 833 ALVLEYMSNGSLEKCLYSDN-----------------------YFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKP 889 (1049)
Q Consensus 833 ~lv~e~~~~g~L~~~l~~~~-----------------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp 889 (1049)
++||||+++++|.+++.... ..+++.+++.++.|+++|++||| ++||+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH---HCCCcccccch
Confidence 99999999999999997643 24899999999999999999999 99999999999
Q ss_pred CCeeecCCCceEEecccCceecCCCccc-cccccccccCcccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCCcccc
Q 039290 890 SNVLLNESMVGHLSDFGIAKILGKEESM-RQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFT-KKKPTDEIFA 967 (1049)
Q Consensus 890 ~NIl~~~~~~~kl~DfGla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~ 967 (1049)
+||+++.++.+||+|||++......... ......+++.|+|||++.+..++.++||||+||++|||++ |..||.....
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 258 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 9999999999999999999876543322 2233456788999999988889999999999999999999 9999976433
Q ss_pred ccchHHHhhhhccccCCcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHh
Q 039290 968 GEMSLKRWVGDSLLSCSITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRET 1042 (1049)
Q Consensus 968 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~ 1042 (1049)
.+.. ....... ....+..++.++.+++.+||+.||++|||++|++++|+++.++
T Consensus 259 ~~~~--~~~~~~~-------------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 259 ERLF--NLLKTGH-------------------RMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp GGHH--HHHHTTC-------------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHH--HHhhcCC-------------------cCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 2211 1111000 0111123567799999999999999999999999999998875
No 109
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=4.2e-38 Score=367.64 Aligned_cols=352 Identities=19% Similarity=0.184 Sum_probs=223.0
Q ss_pred CccceEEeeccccCCCCCCCcccccccceecccccccccccCCCCccccccceEEeccccccccCccccccccceEEEee
Q 039290 199 PVLEGLFISYNQLTGPIPTNLWKCRELHVVSLAFNKFQGGIPRDIGNLTSVRNLFLGNNSLIGEIPNEIGNLRNLEVLGV 278 (1049)
Q Consensus 199 ~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 278 (1049)
+.|++|++++|++++ +| .+..+++|++|+|++|++++. | ++.+++|++|+|++|++++. | ++++++|++|++
T Consensus 42 ~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L 113 (457)
T 3bz5_A 42 ATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNC 113 (457)
T ss_dssp TTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEEC
T ss_pred CCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEEC
Confidence 446666666666664 33 455666666666666666542 2 55666666666666666542 2 555566666666
Q ss_pred ccccCCCccccccccccccceEEeccCccCCCCCCcccCCCCCccEEEcCCCCCCCCCCccccCCCCCceeecccCcccc
Q 039290 279 QSSNLAGLIPASIFNISTLKELAVTDNDLLGSLPSSIDLGLPNLERLFLGENNFSGTIPSSLTNISELSVLDFGFNSFSG 358 (1049)
Q Consensus 279 ~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 358 (1049)
++|++++. | +..+++|++|++++|++++ ++ ...+++|++|++++|+..+.+ .+..+++|++|++++|++++
T Consensus 114 ~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~-l~---l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~ 184 (457)
T 3bz5_A 114 DTNKLTKL-D--VSQNPLLTYLNCARNTLTE-ID---VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE 184 (457)
T ss_dssp CSSCCSCC-C--CTTCTTCCEEECTTSCCSC-CC---CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC
T ss_pred CCCcCCee-c--CCCCCcCCEEECCCCccce-ec---cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce
Confidence 65555543 2 4455555555555555543 22 123445555555555333333 24444445555555554443
Q ss_pred CcccccccccccceeecccccccCCCCCcccccccccCCCCcEEEccCCccccCCCCccccccccccEEEccCCccccCC
Q 039290 359 LIPTTFGNLRSLKLLSLAGNVLTSPTPDLSFLSSLTSCRNLEIIYLSENPINGILPSSIGNFSISMKSLSMESCNISGGI 438 (1049)
Q Consensus 359 ~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~~~~~L~~L~L~~n~i~~~~ 438 (1049)
. | ++.+++|+.|++++|.+++++ +..++ +|++|++++|++++ +
T Consensus 185 l-~--l~~l~~L~~L~l~~N~l~~~~--------l~~l~-------------------------~L~~L~Ls~N~l~~-i 227 (457)
T 3bz5_A 185 L-D--VSQNKLLNRLNCDTNNITKLD--------LNQNI-------------------------QLTFLDCSSNKLTE-I 227 (457)
T ss_dssp C-C--CTTCTTCCEEECCSSCCSCCC--------CTTCT-------------------------TCSEEECCSSCCSC-C
T ss_pred e-c--cccCCCCCEEECcCCcCCeec--------cccCC-------------------------CCCEEECcCCcccc-c
Confidence 2 2 444444444444444444321 22333 45555555555554 3
Q ss_pred CCCCCCCCCccEEEccCCcccccCCccccCcCCCcceEeeccccCCCCCcccccccccceEEeeCcccCCcCchhccCcc
Q 039290 439 PKELGNINNLTVIRLGNNELTGTIPVTLGRLQKLQGLYLQNNKLEGSIPEDLCHLYRLANLYLGDNKLSGRLPACLGNLT 518 (1049)
Q Consensus 439 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 518 (1049)
| ++.+++|+.|++++|++++.. ++.+++|+.|++++|+ |+.|++++|.+.+.+| ++.++
T Consensus 228 p--~~~l~~L~~L~l~~N~l~~~~---~~~l~~L~~L~l~~n~--------------L~~L~l~~n~~~~~~~--~~~l~ 286 (457)
T 3bz5_A 228 D--VTPLTQLTYFDCSVNPLTELD---VSTLSKLTTLHCIQTD--------------LLEIDLTHNTQLIYFQ--AEGCR 286 (457)
T ss_dssp C--CTTCTTCSEEECCSSCCSCCC---CTTCTTCCEEECTTCC--------------CSCCCCTTCTTCCEEE--CTTCT
T ss_pred C--ccccCCCCEEEeeCCcCCCcC---HHHCCCCCEEeccCCC--------------CCEEECCCCccCCccc--ccccc
Confidence 3 666777788888888777643 4456677777776653 4567788888777776 56788
Q ss_pred cCCceeecCcccccccCcccccccccccccccCCccCCCCccCcCCCcceeEeecccccccccccccccCCCcccEEEee
Q 039290 519 SLRDLSLGSNALTSIIPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALSGVIPVTIGGLQGLQLLSLR 598 (1049)
Q Consensus 519 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 598 (1049)
+|+.|++++|+..+.+|. ..++|+.|++++| ++|++|++++|+|++. + ++.+++|+.|+++
T Consensus 287 ~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~-------------~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~ 347 (457)
T 3bz5_A 287 KIKELDVTHNTQLYLLDC---QAAGITELDLSQN-------------PKLVYLYLNNTELTEL-D--VSHNTKLKSLSCV 347 (457)
T ss_dssp TCCCCCCTTCTTCCEEEC---TTCCCSCCCCTTC-------------TTCCEEECTTCCCSCC-C--CTTCTTCSEEECC
T ss_pred cCCEEECCCCcccceecc---CCCcceEechhhc-------------ccCCEEECCCCccccc-c--cccCCcCcEEECC
Confidence 899999999988777764 3456666666655 5789999999999985 3 8999999999999
Q ss_pred cccccCCccccccCccCCcEEeccCccccCCcccccccccccceeeccCCcccccCCCC
Q 039290 599 YNRLQGPIPESFGGLKSLNFVDMSNNNLSGTIPKSMEALSYLKHLNLSFNQLEGEIPTR 657 (1049)
Q Consensus 599 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~ 657 (1049)
+|+|++ ++.|..|++++|.++|. ..+..|..+++++|+++|.+|..
T Consensus 348 ~N~l~~--------l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~ 393 (457)
T 3bz5_A 348 NAHIQD--------FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSPD 393 (457)
T ss_dssp SSCCCB--------CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCTT
T ss_pred CCCCCC--------ccccccccccCCcEEec-----ceeeecCccccccCcEEEEcChh
Confidence 999996 35677788999999976 35667889999999999999963
No 110
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=6.4e-39 Score=364.40 Aligned_cols=249 Identities=25% Similarity=0.324 Sum_probs=205.5
Q ss_pred cCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeeccc---CCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEE
Q 039290 761 DGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEF---DGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVL 836 (1049)
Q Consensus 761 ~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 836 (1049)
++|++.+.||+|+||.||+|+.. +++.||+|++.... ......+.+|+++++.++||||+++++++.+.+..++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 57889999999999999999964 68899999996542 445678899999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCcc
Q 039290 837 EYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEES 916 (1049)
Q Consensus 837 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~~ 916 (1049)
||+.+|+|.+++.... .+++..++.++.||+.||+||| +.||+||||||+||+++.++.+||+|||++.......
T Consensus 95 e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~- 169 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQNV-HFKEETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET- 169 (384)
T ss_dssp CCCTTEEHHHHHHTTC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTC-
T ss_pred ecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEECCCCCEEEeccceeeeccCCC-
Confidence 9999999999987654 4899999999999999999999 9999999999999999999999999999998765432
Q ss_pred ccccccccccCcccccccCC---CCcCcccchHHHHHHHHHHHhCCCCCCccccccch-HHHhhhhccccCCcchhcccc
Q 039290 917 MRQTKTLGTIGYMAPEYGRE---GKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMS-LKRWVGDSLLSCSITEVADAN 992 (1049)
Q Consensus 917 ~~~~~~~~~~~y~aPE~~~~---~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 992 (1049)
......||+.|+|||++.. ..++.++||||+||++|||++|+.||......... .......
T Consensus 170 -~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~-------------- 234 (384)
T 4fr4_A 170 -QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFET-------------- 234 (384)
T ss_dssp -CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHH--------------
T ss_pred -ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhh--------------
Confidence 2345679999999999864 45899999999999999999999999753222111 1111000
Q ss_pred cccccccCchhhHHHHHHHHHHHhhccccCCCCCCC-HHHHHHH
Q 039290 993 LLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRIS-MKDVANR 1035 (1049)
Q Consensus 993 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt-~~ell~~ 1035 (1049)
.....+..++.++.+++.+||+.||++||+ ++++.+|
T Consensus 235 ------~~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~h 272 (384)
T 4fr4_A 235 ------TVVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNF 272 (384)
T ss_dssp ------CCCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTS
T ss_pred ------cccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHcC
Confidence 001112234577899999999999999998 7777653
No 111
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=3.5e-39 Score=365.88 Aligned_cols=252 Identities=23% Similarity=0.357 Sum_probs=206.3
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccC--CCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEE
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFD--GSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVL 836 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 836 (1049)
.++|++.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 107 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 107 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 457999999999999999999964 789999999976532 23467889999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCC---CceEEecccCceecCC
Q 039290 837 EYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNES---MVGHLSDFGIAKILGK 913 (1049)
Q Consensus 837 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~---~~~kl~DfGla~~~~~ 913 (1049)
||+++|+|.+.+.... .+++.++..++.||++|++||| ++||+||||||+||+++.+ +.+||+|||++.....
T Consensus 108 e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~ 183 (362)
T 2bdw_A 108 DLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 183 (362)
T ss_dssp CCCCSCBHHHHHTTCS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTT
T ss_pred ecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecC
Confidence 9999999999887654 5899999999999999999999 9999999999999999854 4699999999987653
Q ss_pred CccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhccccc
Q 039290 914 EESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANL 993 (1049)
Q Consensus 914 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1049)
.. ......||+.|+|||++.+..++.++||||+||++|||++|..||......+. ...+....
T Consensus 184 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~--~~~i~~~~------------- 246 (362)
T 2bdw_A 184 SE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRL--YAQIKAGA------------- 246 (362)
T ss_dssp CC--SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHTC-------------
T ss_pred Cc--ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHH--HHHHHhCC-------------
Confidence 32 22345789999999999988999999999999999999999999975322111 11110000
Q ss_pred ccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 994 LNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 994 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
..........++.++.+++.+||+.||++|||+.|+++|
T Consensus 247 ---~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 247 ---YDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp ---CCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred ---CCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000001112345678999999999999999999999887
No 112
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=9.4e-39 Score=356.44 Aligned_cols=270 Identities=23% Similarity=0.315 Sum_probs=193.4
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeeccc-CCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEEe
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEF-DGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVLE 837 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 837 (1049)
.++|++.+.||+|+||+||+|+.. +++.||+|+++... ....+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 457999999999999999999954 78999999997654 3345788999999999999999999999999999999999
Q ss_pred ccCCCChhhhhhcCC-----CccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecC
Q 039290 838 YMSNGSLEKCLYSDN-----YFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILG 912 (1049)
Q Consensus 838 ~~~~g~L~~~l~~~~-----~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~ 912 (1049)
|++ |+|.+++.... ..+++..+..++.|+++||+||| +.||+||||||+||+++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 998 59999886532 35899999999999999999999 9999999999999999999999999999998765
Q ss_pred CCccccccccccccCcccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhc--cccCCcchh-
Q 039290 913 KEESMRQTKTLGTIGYMAPEYGRE-GKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDS--LLSCSITEV- 988 (1049)
Q Consensus 913 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~- 988 (1049)
.... ......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||......+.. ....... .....+..+
T Consensus 160 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~-~~i~~~~~~~~~~~~~~~~ 237 (317)
T 2pmi_A 160 IPVN-TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQL-KLIFDIMGTPNESLWPSVT 237 (317)
T ss_dssp SCCC-CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH-HHHHHHHCSCCTTTCGGGG
T ss_pred CCcc-cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH-HHHHHHhCCCChhHhhhhh
Confidence 3322 2234568999999999876 46899999999999999999999999764332221 1111100 000000000
Q ss_pred ----cccccccccccC------chhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 989 ----ADANLLNCEEND------FSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 989 ----~~~~~~~~~~~~------~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
..+......... .......+.++.+++.+||+.||++|||++|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 238 KLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp GCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 000000000000 00111345679999999999999999999999876
No 113
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-39 Score=370.81 Aligned_cols=259 Identities=25% Similarity=0.420 Sum_probs=200.3
Q ss_pred CCCCCceecCCCcEEEEEEEeC--CC--cEEEEEEeeccc-CCCHHHHHHHHHHHhhcCCCceeeEEeeeec-CCeeEEE
Q 039290 762 GFSENKLLGMGSFGSVYKGVLP--DG--MEIAAKVFHMEF-DGSLESFHAECKVMGSIRHRNLVKIISSCSN-NDFKALV 835 (1049)
Q Consensus 762 ~~~~~~~lg~G~fg~Vy~a~~~--~~--~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~-~~~~~lv 835 (1049)
.|+..+.||+|+||+||+|++. ++ ..||+|.++... ....+++.+|+.++++++||||+++++++.+ ++..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 4667789999999999999853 32 358999986543 2345789999999999999999999998654 5678999
Q ss_pred EeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCc
Q 039290 836 LEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEE 915 (1049)
Q Consensus 836 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~ 915 (1049)
|||+++|+|.+++......+++.+++.++.|+++||+||| ++||+||||||+||+++.++.+||+|||+++......
T Consensus 170 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 246 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 246 (373)
T ss_dssp EECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred EECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCccchheEEECCCCCEEEeeccccccccccc
Confidence 9999999999999887777899999999999999999999 9999999999999999999999999999998664332
Q ss_pred cc---cccccccccCcccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCCccccccchHHHhhhhccccCCcchhccc
Q 039290 916 SM---RQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFT-KKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADA 991 (1049)
Q Consensus 916 ~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 991 (1049)
.. ......+++.|+|||++.+..++.++||||+||++|||++ |.+||......+.......+
T Consensus 247 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~-------------- 312 (373)
T 3c1x_A 247 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG-------------- 312 (373)
T ss_dssp -----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTT--------------
T ss_pred cccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcC--------------
Confidence 11 1223456788999999998899999999999999999999 67777653332221111000
Q ss_pred ccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhhh
Q 039290 992 NLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETLS 1044 (1049)
Q Consensus 992 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~~ 1044 (1049)
.+...+..++..+.+++.+||+.||++|||++|++++|+++..++.
T Consensus 313 -------~~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~ 358 (373)
T 3c1x_A 313 -------RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 358 (373)
T ss_dssp -------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred -------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcc
Confidence 0011122356779999999999999999999999999999988654
No 114
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=2.5e-39 Score=361.39 Aligned_cols=272 Identities=21% Similarity=0.358 Sum_probs=212.7
Q ss_pred CCCCceecCCCcEEEEEEEeC-----CCcEEEEEEeecccC-CCHHHHHHHHHHHhhcCCCceeeEEeeeec--CCeeEE
Q 039290 763 FSENKLLGMGSFGSVYKGVLP-----DGMEIAAKVFHMEFD-GSLESFHAECKVMGSIRHRNLVKIISSCSN--NDFKAL 834 (1049)
Q Consensus 763 ~~~~~~lg~G~fg~Vy~a~~~-----~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~hpniv~l~~~~~~--~~~~~l 834 (1049)
|++.+.||+|+||+||+|.+. +++.||+|+++.... ...+.+.+|++++++++||||+++++++.+ ....++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 488899999999999998642 688899999976532 235678999999999999999999999987 467899
Q ss_pred EEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCC
Q 039290 835 VLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKE 914 (1049)
Q Consensus 835 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~ 914 (1049)
||||+++|+|.+++.... +++.+++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||++......
T Consensus 113 v~e~~~~~~L~~~l~~~~--~~~~~~~~i~~~l~~~l~~LH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 187 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 187 (318)
T ss_dssp EECCCTTCBHHHHGGGSC--CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTT
T ss_pred EEecccCCcHHHHHhhCC--CCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEEcCCCCEEECCcccccccccc
Confidence 999999999999997654 899999999999999999999 999999999999999999999999999999887543
Q ss_pred ccc--cccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhcccc
Q 039290 915 ESM--RQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADAN 992 (1049)
Q Consensus 915 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 992 (1049)
... ......++..|+|||++.+..++.++||||+||++|||++|..||............+...........+....
T Consensus 188 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 266 (318)
T 3lxp_A 188 HEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLER- 266 (318)
T ss_dssp CSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHT-
T ss_pred ccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhc-
Confidence 321 22334578889999999988999999999999999999999999875322211111100000000000000000
Q ss_pred cccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhhhh
Q 039290 993 LLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETLSA 1045 (1049)
Q Consensus 993 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~~~ 1045 (1049)
......+..++.++.+++.+||+.||++|||++|+++.|+++.+++..
T Consensus 267 -----~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~ 314 (318)
T 3lxp_A 267 -----GERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQG 314 (318)
T ss_dssp -----TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC
T ss_pred -----ccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhcc
Confidence 111222344667899999999999999999999999999999988754
No 115
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=4.6e-39 Score=350.76 Aligned_cols=251 Identities=25% Similarity=0.452 Sum_probs=196.4
Q ss_pred hcCCCCCceecCCCcEEEEEEEeCCCcEEEEEEeecccC----CCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEE
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLPDGMEIAAKVFHMEFD----GSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALV 835 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~~----~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 835 (1049)
.++|+..+.||+|+||.||+|++ .++.||+|+++.... ...+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 35788899999999999999997 488999999875432 2357789999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCC---eEEcCCCCCCeeecC--------CCceEEec
Q 039290 836 LEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTP---IVHCDIKPSNVLLNE--------SMVGHLSD 904 (1049)
Q Consensus 836 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~---ivH~Dlkp~NIl~~~--------~~~~kl~D 904 (1049)
|||+++++|.+++... .+++..++.++.|+++|++||| +++ |+||||||+||+++. ++.+||+|
T Consensus 85 ~e~~~~~~L~~~~~~~--~~~~~~~~~i~~~l~~~l~~lH---~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~D 159 (271)
T 3dtc_A 85 MEFARGGPLNRVLSGK--RIPPDILVNWAVQIARGMNYLH---DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITD 159 (271)
T ss_dssp EECCTTEEHHHHHTSS--CCCHHHHHHHHHHHHHHHHHHH---HSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECC
T ss_pred EEcCCCCCHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHH---hCCCCceeecCCchHHEEEecccccccccCcceEEcc
Confidence 9999999999988643 5899999999999999999999 887 999999999999985 77899999
Q ss_pred ccCceecCCCccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCC
Q 039290 905 FGIAKILGKEESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCS 984 (1049)
Q Consensus 905 fGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 984 (1049)
||++........ ....|++.|+|||++.+..++.++||||+|+++|||++|+.||................
T Consensus 160 fg~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~------ 230 (271)
T 3dtc_A 160 FGLAREWHRTTK---MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNK------ 230 (271)
T ss_dssp CCC----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSC------
T ss_pred CCcccccccccc---cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCC------
Confidence 999986643322 23568999999999988889999999999999999999999997633222211111000
Q ss_pred cchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 039290 985 ITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRI 1039 (1049)
Q Consensus 985 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i 1039 (1049)
.....+..++..+.+++.+||+.||++|||++|++++|+++
T Consensus 231 --------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 231 --------------LALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp --------------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred --------------CCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 00111233556799999999999999999999999999854
No 116
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.7e-39 Score=369.64 Aligned_cols=259 Identities=24% Similarity=0.400 Sum_probs=209.7
Q ss_pred cCCCCCceecCCCcEEEEEEEeC------CCcEEEEEEeeccc-CCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeE
Q 039290 761 DGFSENKLLGMGSFGSVYKGVLP------DGMEIAAKVFHMEF-DGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKA 833 (1049)
Q Consensus 761 ~~~~~~~~lg~G~fg~Vy~a~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~ 833 (1049)
++|++.+.||+|+||+||+|++. +++.||||+++... .....++.+|+.++++++||||+++++++.+.+..+
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 150 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 150 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence 46888999999999999999943 46689999996442 223457889999999999999999999999999999
Q ss_pred EEEeccCCCChhhhhhcCC------CccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCC---ceEEec
Q 039290 834 LVLEYMSNGSLEKCLYSDN------YFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESM---VGHLSD 904 (1049)
Q Consensus 834 lv~e~~~~g~L~~~l~~~~------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~---~~kl~D 904 (1049)
+||||+++|+|.+++...+ ..+++.+++.++.|+++||+||| ++||+||||||+||+++.++ .+||+|
T Consensus 151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kL~D 227 (367)
T 3l9p_A 151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGD 227 (367)
T ss_dssp EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEEecCCCCceEEECC
Confidence 9999999999999997643 35899999999999999999999 99999999999999999544 599999
Q ss_pred ccCceecCCCcc-ccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCCccccccchHHHhhhhcccc
Q 039290 905 FGIAKILGKEES-MRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFT-KKKPTDEIFAGEMSLKRWVGDSLLS 982 (1049)
Q Consensus 905 fGla~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 982 (1049)
||+++....... .......+|+.|+|||++.+..++.++||||+||++|||++ |..||......+. ...+...
T Consensus 228 FG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~--~~~i~~~--- 302 (367)
T 3l9p_A 228 FGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV--LEFVTSG--- 302 (367)
T ss_dssp CHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH--HHHHHTT---
T ss_pred CccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH--HHHHHcC---
Confidence 999975532221 22234567889999999988899999999999999999998 9999976322211 1111000
Q ss_pred CCcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhh
Q 039290 983 CSITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETL 1043 (1049)
Q Consensus 983 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~ 1043 (1049)
.+...+..++..+.+++.+||+.||++|||++|++++|+.+.+..
T Consensus 303 ----------------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~ 347 (367)
T 3l9p_A 303 ----------------GRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 347 (367)
T ss_dssp ----------------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred ----------------CCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence 001112335667899999999999999999999999999887654
No 117
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=3.4e-39 Score=381.52 Aligned_cols=257 Identities=24% Similarity=0.402 Sum_probs=214.5
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEEec
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVLEY 838 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 838 (1049)
..+|+..+.||+|+||.||+|++. ++..||||+++.. ....+++.+|++++++++||||+++++++.+.+..++||||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~ 297 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 297 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSS-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCc-ccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEc
Confidence 346888899999999999999976 4889999999754 34568899999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcC-CCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCccc
Q 039290 839 MSNGSLEKCLYSD-NYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEESM 917 (1049)
Q Consensus 839 ~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~~~ 917 (1049)
+++|+|.+++... ...+++..++.++.|+++||+||| +++|+||||||+||+++.++.+||+|||+++........
T Consensus 298 ~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 374 (495)
T 1opk_A 298 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT 374 (495)
T ss_dssp CTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEE
T ss_pred cCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChhhEEECCCCcEEEeecccceeccCCcee
Confidence 9999999999764 346899999999999999999999 999999999999999999999999999999876543333
Q ss_pred cccccccccCcccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCCccccccchHHHhhhhccccCCcchhcccccccc
Q 039290 918 RQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFT-KKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLLNC 996 (1049)
Q Consensus 918 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1049)
......++..|+|||++.+..++.++|||||||++|||++ |..||......+. ...+..
T Consensus 375 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~--~~~~~~------------------ 434 (495)
T 1opk_A 375 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV--YELLEK------------------ 434 (495)
T ss_dssp CCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH--HHHHHT------------------
T ss_pred ecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHH--HHHHHc------------------
Confidence 3333456788999999988899999999999999999999 9999876432221 111100
Q ss_pred cccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHH
Q 039290 997 EENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRE 1041 (1049)
Q Consensus 997 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~ 1041 (1049)
..+...+..++.++.++|.+||+.||++|||++|+++.|+++.+
T Consensus 435 -~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~ 478 (495)
T 1opk_A 435 -DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 478 (495)
T ss_dssp -TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred -CCCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence 00112223466789999999999999999999999999987643
No 118
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=8.2e-39 Score=353.94 Aligned_cols=250 Identities=24% Similarity=0.333 Sum_probs=198.2
Q ss_pred hcCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeecccC--------------------------CCHHHHHHHHHHHh
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEFD--------------------------GSLESFHAECKVMG 812 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~~--------------------------~~~~~~~~e~~~l~ 812 (1049)
.++|++.+.||+|+||.||+|+. .+++.||+|++..... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 46799999999999999999995 4788999999865431 12356889999999
Q ss_pred hcCCCceeeEEeeeec--CCeeEEEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCC
Q 039290 813 SIRHRNLVKIISSCSN--NDFKALVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPS 890 (1049)
Q Consensus 813 ~l~hpniv~l~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~ 890 (1049)
+++||||+++++++.+ .+..++||||+++++|.+++.. ..+++.+++.++.|+++||+||| +.||+||||||+
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~ 166 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL--KPLSEDQARFYFQDLIKGIEYLH---YQKIIHRDIKPS 166 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS--SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGG
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHH
Confidence 9999999999999986 5688999999999999886543 35899999999999999999999 999999999999
Q ss_pred CeeecCCCceEEecccCceecCCCccccccccccccCcccccccCCCC---cCcccchHHHHHHHHHHHhCCCCCCcccc
Q 039290 891 NVLLNESMVGHLSDFGIAKILGKEESMRQTKTLGTIGYMAPEYGREGK---VSRKCDVYSYGIMLMETFTKKKPTDEIFA 967 (1049)
Q Consensus 891 NIl~~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---~~~~~DvwslG~il~elltg~~p~~~~~~ 967 (1049)
||+++.++.+||+|||++........ ......||+.|+|||++.+.. ++.++||||+||++|||++|+.||.....
T Consensus 167 Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~ 245 (298)
T 2zv2_A 167 NLLVGEDGHIKIADFGVSNEFKGSDA-LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI 245 (298)
T ss_dssp GEEECTTSCEEECCCTTCEECSSSSC-EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred HEEECCCCCEEEecCCCccccccccc-cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccH
Confidence 99999999999999999987654332 223457899999999987654 47889999999999999999999975321
Q ss_pred ccchHHHhhhhccccCCcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 968 GEMSLKRWVGDSLLSCSITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 968 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
.. ....+.... . .++....++.++.+++.+||+.||++|||++|+++|
T Consensus 246 ~~--~~~~~~~~~------------~------~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 246 MC--LHSKIKSQA------------L------EFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp HH--HHHHHHHCC------------C------CCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred HH--HHHHHhccc------------C------CCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 11 111000000 0 000112245678999999999999999999999876
No 119
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=1.1e-38 Score=349.49 Aligned_cols=258 Identities=24% Similarity=0.409 Sum_probs=213.5
Q ss_pred hcCCCCCceecCCCcEEEEEEEeCCCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEEecc
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLPDGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVLEYM 839 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 839 (1049)
.++|++.+.||+|+||.||+|+..++..||+|+++... ...+.+.+|++++++++||||+++++++.+ +..++||||+
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~ 89 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYM 89 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEecC
Confidence 45788999999999999999998888899999997543 356789999999999999999999999874 4579999999
Q ss_pred CCCChhhhhhcCC-CccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCcccc
Q 039290 840 SNGSLEKCLYSDN-YFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEESMR 918 (1049)
Q Consensus 840 ~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~~~~ 918 (1049)
++++|.+++.... ..+++.++..++.|+++|++||| +.||+||||||+||++++++.+||+|||++..........
T Consensus 90 ~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 166 (279)
T 1qpc_A 90 ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA 166 (279)
T ss_dssp TTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEEC
T ss_pred CCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHhhEEEcCCCCEEECCCcccccccCccccc
Confidence 9999999987543 25899999999999999999999 9999999999999999999999999999998775544333
Q ss_pred ccccccccCcccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCCccccccchHHHhhhhccccCCcchhccccccccc
Q 039290 919 QTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFT-KKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLLNCE 997 (1049)
Q Consensus 919 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1049)
.....++..|+|||++.+..++.++||||+|+++|||++ |..||......+. ........
T Consensus 167 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~--~~~~~~~~----------------- 227 (279)
T 1qpc_A 167 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV--IQNLERGY----------------- 227 (279)
T ss_dssp CTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH--HHHHHTTC-----------------
T ss_pred ccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHH--HHHHhccc-----------------
Confidence 334456789999999988889999999999999999999 8999875332211 11110000
Q ss_pred ccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhh
Q 039290 998 ENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETL 1043 (1049)
Q Consensus 998 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~ 1043 (1049)
+...+..++.++.+++.+|++.||++|||++++++.|+++..+.
T Consensus 228 --~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 271 (279)
T 1qpc_A 228 --RMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 271 (279)
T ss_dssp --CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred --CCCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhc
Confidence 00111234568999999999999999999999999999987764
No 120
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=9.5e-39 Score=359.41 Aligned_cols=250 Identities=22% Similarity=0.314 Sum_probs=200.3
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeeccc-CCCHHHHHHHHHHHhhcCCCceeeEEeeeecCC-------
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEF-DGSLESFHAECKVMGSIRHRNLVKIISSCSNND------- 830 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~------- 830 (1049)
.++|++.+.||+|+||.||+|+.. +++.||||+++... ....+.+.+|++++++++||||+++++++.+.+
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 457889999999999999999975 89999999997644 334578999999999999999999999985543
Q ss_pred --------------------------------------------------eeEEEEeccCCCChhhhhhcCCC--ccCHH
Q 039290 831 --------------------------------------------------FKALVLEYMSNGSLEKCLYSDNY--FLDIL 858 (1049)
Q Consensus 831 --------------------------------------------------~~~lv~e~~~~g~L~~~l~~~~~--~~~~~ 858 (1049)
..++||||+++++|.+++..... ..++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 37999999999999999976543 45667
Q ss_pred HHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCcc-----------ccccccccccC
Q 039290 859 QRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEES-----------MRQTKTLGTIG 927 (1049)
Q Consensus 859 ~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~~-----------~~~~~~~~~~~ 927 (1049)
.++.++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++....... .......||+.
T Consensus 165 ~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL 241 (332)
T ss_dssp HHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred HHHHHHHHHHHHHHHHH---hCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence 78999999999999999 99999999999999999999999999999987754321 12233568999
Q ss_pred cccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhcccccccccccCchhhHHH
Q 039290 928 YMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLLNCEENDFSAREQC 1007 (1049)
Q Consensus 928 y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1049)
|+|||++.+..++.++||||+||++|||++|..|+.... ...... . ...........
T Consensus 242 y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~----~~~~~~------------~-------~~~~~~~~~~~ 298 (332)
T 3qd2_B 242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERV----RIITDV------------R-------NLKFPLLFTQK 298 (332)
T ss_dssp GSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHH----HHHHHH------------H-------TTCCCHHHHHH
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHH----HHHHHh------------h-------ccCCCcccccC
Confidence 999999999899999999999999999999877643210 000000 0 00111223445
Q ss_pred HHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 1008 VSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 1008 ~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
+.++.+++.+||+.||++|||++|++++
T Consensus 299 ~~~~~~li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 299 YPQEHMMVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp CHHHHHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred ChhHHHHHHHHccCCCCcCCCHHHHhhc
Confidence 5678999999999999999999999975
No 121
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=8.9e-39 Score=364.01 Aligned_cols=271 Identities=16% Similarity=0.186 Sum_probs=209.8
Q ss_pred hcCCCCCceecCCCcEEEEEEEeCC------CcEEEEEEeecccCC-----------CHHHHHHHHHHHhhcCCCceeeE
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLPD------GMEIAAKVFHMEFDG-----------SLESFHAECKVMGSIRHRNLVKI 822 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~~------~~~vavK~~~~~~~~-----------~~~~~~~e~~~l~~l~hpniv~l 822 (1049)
.++|++.+.||+|+||+||+|.+.. ++.||+|++...... ....+..|+..++.++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4579999999999999999999754 478999998654311 11233445666777789999999
Q ss_pred EeeeecC----CeeEEEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeec--C
Q 039290 823 ISSCSNN----DFKALVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLN--E 896 (1049)
Q Consensus 823 ~~~~~~~----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~--~ 896 (1049)
++++... ...++||||+ +++|.+++......+++.+++.++.|++.||+||| +.||+||||||+||+++ .
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~iiHrDlkp~Nill~~~~ 189 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIH---EHEYVHGDIKASNLLLNYKN 189 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEESSC
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeEEecCCHHHEEEecCC
Confidence 9998764 4589999999 99999999887677999999999999999999999 99999999999999999 8
Q ss_pred CCceEEecccCceecCCCccc------cccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccc
Q 039290 897 SMVGHLSDFGIAKILGKEESM------RQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEM 970 (1049)
Q Consensus 897 ~~~~kl~DfGla~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~ 970 (1049)
++.+||+|||+++.+...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 190 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~ 269 (364)
T 3op5_A 190 PDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPK 269 (364)
T ss_dssp TTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHH
T ss_pred CCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHH
Confidence 899999999999876543221 11234589999999999998999999999999999999999999986433322
Q ss_pred hHHHhhhhccccCCcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhhhh
Q 039290 971 SLKRWVGDSLLSCSITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETLSA 1045 (1049)
Q Consensus 971 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~~~ 1045 (1049)
... +..... ...+.++.+..+. ...++.++.+++.+||+.+|++||+++++++.|+++.++...
T Consensus 270 ~~~-~~~~~~-~~~~~~~~~~~~~---------~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~ 333 (364)
T 3op5_A 270 YVR-DSKIRY-RENIASLMDKCFP---------AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGS 333 (364)
T ss_dssp HHH-HHHHHH-HHCHHHHHHHHSC---------TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred HHH-HHHHHh-hhhHHHHHHHhcc---------cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCC
Confidence 111 111000 0111111111110 023467899999999999999999999999999999987643
No 122
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=2.8e-39 Score=363.03 Aligned_cols=251 Identities=24% Similarity=0.322 Sum_probs=206.6
Q ss_pred HHhcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeeccc---CCCHHHHHHHHHHHhhc-CCCceeeEEeeeecCCee
Q 039290 758 RATDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEF---DGSLESFHAECKVMGSI-RHRNLVKIISSCSNNDFK 832 (1049)
Q Consensus 758 ~~~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~ 832 (1049)
...++|++.+.||+|+||+||+|+.. +++.||+|+++... ....+.+..|.+++..+ +||||+++++++.+.+..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 34578999999999999999999965 68899999997642 44567788999999887 899999999999999999
Q ss_pred EEEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecC
Q 039290 833 ALVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILG 912 (1049)
Q Consensus 833 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~ 912 (1049)
|+||||+++|+|.+++...+ .+++.++..++.||+.||+||| ++||+||||||+||+++.++.+||+|||+++...
T Consensus 94 ~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 169 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENM 169 (345)
T ss_dssp EEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCChhhEEECCCCCEEEeEChhhhhcc
Confidence 99999999999999987654 4899999999999999999999 9999999999999999999999999999998643
Q ss_pred CCccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhcccc
Q 039290 913 KEESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADAN 992 (1049)
Q Consensus 913 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 992 (1049)
... .......||+.|+|||++.+..++.++||||+||++|||++|..||......+. ...+.. .
T Consensus 170 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~--~~~i~~--~----------- 233 (345)
T 1xjd_A 170 LGD-AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEEL--FHSIRM--D----------- 233 (345)
T ss_dssp CTT-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHH--C-----------
T ss_pred cCC-CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHH--HHHHHh--C-----------
Confidence 222 123456799999999999999999999999999999999999999975322211 111000 0
Q ss_pred cccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHH-HHHHH
Q 039290 993 LLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMK-DVANR 1035 (1049)
Q Consensus 993 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~-ell~~ 1035 (1049)
....+...+.++.+++.+||+.||++||++. |+++|
T Consensus 234 -------~~~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~h 270 (345)
T 1xjd_A 234 -------NPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQH 270 (345)
T ss_dssp -------CCCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGS
T ss_pred -------CCCCCcccCHHHHHHHHHHhcCCHhHcCCChHHHHcC
Confidence 0011122456789999999999999999997 77654
No 123
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=3.4e-39 Score=361.51 Aligned_cols=261 Identities=25% Similarity=0.398 Sum_probs=208.4
Q ss_pred cCCCCCceecCCCcEEEEEEEeC-CCcE----EEEEEeeccc-CCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEE
Q 039290 761 DGFSENKLLGMGSFGSVYKGVLP-DGME----IAAKVFHMEF-DGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKAL 834 (1049)
Q Consensus 761 ~~~~~~~~lg~G~fg~Vy~a~~~-~~~~----vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 834 (1049)
++|+..+.||+|+||+||+|++. +++. ||+|.+.... ......+.+|+.++++++||||+++++++.+ +..++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPG-SSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECB-SSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC-CccEE
Confidence 46888999999999999999954 4443 7788775433 3334667889999999999999999999874 56789
Q ss_pred EEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCC
Q 039290 835 VLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKE 914 (1049)
Q Consensus 835 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~ 914 (1049)
||||+.+|+|.+++...+..+++..++.++.|+++||+||| +.||+||||||+||+++.++.+||+|||+++.....
T Consensus 92 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 168 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPD 168 (325)
T ss_dssp EEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHH---HTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCC
T ss_pred EEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHH---hCCCCCCccchheEEECCCCeEEECCCCcccccCcc
Confidence 99999999999999877667899999999999999999999 999999999999999999999999999999877544
Q ss_pred ccc-cccccccccCcccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCCccccccchHHHhhhhccccCCcchhcccc
Q 039290 915 ESM-RQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFT-KKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADAN 992 (1049)
Q Consensus 915 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 992 (1049)
... ......++..|+|||++.+..++.++||||+||++|||++ |..||......+.... .....
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~--~~~~~------------ 234 (325)
T 3kex_A 169 DKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDL--LEKGE------------ 234 (325)
T ss_dssp TTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHH--HHTTC------------
T ss_pred cccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHH--HHcCC------------
Confidence 322 2234567789999999998899999999999999999999 9999986433222111 11000
Q ss_pred cccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhhhhc
Q 039290 993 LLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETLSAY 1046 (1049)
Q Consensus 993 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~~~~ 1046 (1049)
+...+..++.++.+++.+||+.||++|||++|++++|+++.+.-..+
T Consensus 235 -------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~~~~~ 281 (325)
T 3kex_A 235 -------RLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARDPPRY 281 (325)
T ss_dssp -------BCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTSHHHH
T ss_pred -------CCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcchhh
Confidence 00111123456789999999999999999999999999987655444
No 124
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=2.1e-39 Score=356.80 Aligned_cols=261 Identities=24% Similarity=0.397 Sum_probs=218.0
Q ss_pred HhcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEEe
Q 039290 759 ATDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVLE 837 (1049)
Q Consensus 759 ~~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 837 (1049)
..++|++.+.||+|+||.||+|.+. ++..||+|+++.. ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 89 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 89 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEE
Confidence 4567889999999999999999965 5889999999754 3456789999999999999999999999999999999999
Q ss_pred ccCCCChhhhhhcC-CCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCcc
Q 039290 838 YMSNGSLEKCLYSD-NYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEES 916 (1049)
Q Consensus 838 ~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~~ 916 (1049)
|+++++|.+++... ...+++..++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||++........
T Consensus 90 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 166 (288)
T 3kfa_A 90 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 166 (288)
T ss_dssp CCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHH---HHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSS
T ss_pred cCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHH---HCCccCCCCCcceEEEcCCCCEEEccCccceeccCCcc
Confidence 99999999999763 345899999999999999999999 99999999999999999999999999999987765444
Q ss_pred ccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCCccccccchHHHhhhhccccCCcchhccccccc
Q 039290 917 MRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFT-KKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLLN 995 (1049)
Q Consensus 917 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1049)
.......+++.|+|||++.+..++.++||||+|+++|+|++ |..||......+. .......
T Consensus 167 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~--~~~~~~~---------------- 228 (288)
T 3kfa_A 167 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV--YELLEKD---------------- 228 (288)
T ss_dssp EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH--HHHHHTT----------------
T ss_pred ccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH--HHHHhcc----------------
Confidence 44444567889999999988899999999999999999999 9999876332221 1111000
Q ss_pred ccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhhh
Q 039290 996 CEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETLS 1044 (1049)
Q Consensus 996 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~~ 1044 (1049)
.+...+..++.++.+++.+|++.||++|||++|+++.|+++..+..
T Consensus 229 ---~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~~ 274 (288)
T 3kfa_A 229 ---YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 274 (288)
T ss_dssp ---CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred ---CCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhcc
Confidence 0111123356779999999999999999999999999999887643
No 125
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=7.9e-39 Score=360.73 Aligned_cols=245 Identities=23% Similarity=0.269 Sum_probs=207.0
Q ss_pred cCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeeccc---CCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEE
Q 039290 761 DGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEF---DGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVL 836 (1049)
Q Consensus 761 ~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 836 (1049)
++|+..+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 57889999999999999999965 78999999996542 345678899999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCcc
Q 039290 837 EYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEES 916 (1049)
Q Consensus 837 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~~ 916 (1049)
||+++|+|.+++...+ .+++.+++.++.||+.||+||| ++||+||||||+||+++.++.+||+|||+++.....
T Consensus 121 e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~-- 194 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-- 194 (350)
T ss_dssp ECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC--
T ss_pred cCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCccceEEECCCCCEEEcccccceeccCC--
Confidence 9999999999997654 4899999999999999999999 999999999999999999999999999999876432
Q ss_pred ccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhcccccccc
Q 039290 917 MRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLLNC 996 (1049)
Q Consensus 917 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1049)
.....||+.|+|||++.+..++.++||||+||++|||++|..||......+. .......
T Consensus 195 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~-~~~i~~~------------------ 253 (350)
T 1rdq_E 195 --TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI-YEKIVSG------------------ 253 (350)
T ss_dssp --BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHC------------------
T ss_pred --cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHH-HHHHHcC------------------
Confidence 2345789999999999999999999999999999999999999975322111 1111100
Q ss_pred cccCchhhHHHHHHHHHHHhhccccCCCCCCC-----HHHHHHH
Q 039290 997 EENDFSAREQCVSSIFSLAMDCTVDLPEKRIS-----MKDVANR 1035 (1049)
Q Consensus 997 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt-----~~ell~~ 1035 (1049)
....+..++.++.+++.+||+.||++||+ ++|+++|
T Consensus 254 ---~~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 254 ---KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp ---CCCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred ---CCCCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 00111234567899999999999999998 8888876
No 126
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=6.9e-39 Score=358.97 Aligned_cols=261 Identities=23% Similarity=0.435 Sum_probs=197.2
Q ss_pred HhcCCCCCceecCCCcEEEEEEEeCCC----cEEEEEEeeccc--CCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCee
Q 039290 759 ATDGFSENKLLGMGSFGSVYKGVLPDG----MEIAAKVFHMEF--DGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFK 832 (1049)
Q Consensus 759 ~~~~~~~~~~lg~G~fg~Vy~a~~~~~----~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~ 832 (1049)
..++|++.+.||+|+||+||+|+.... ..||+|+++... ....+.+.+|++++++++||||+++++++.+.+..
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 346799999999999999999996533 279999997653 33457899999999999999999999999877655
Q ss_pred ------EEEEeccCCCChhhhhhcCC-----CccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceE
Q 039290 833 ------ALVLEYMSNGSLEKCLYSDN-----YFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGH 901 (1049)
Q Consensus 833 ------~lv~e~~~~g~L~~~l~~~~-----~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~k 901 (1049)
++||||+++|+|.+++.... ..+++.+++.++.|+++|++||| ++||+||||||+||+++.++.+|
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~Dikp~NIli~~~~~~k 177 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVC 177 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEE
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH---cCCcccCCCCcceEEEcCCCCEE
Confidence 89999999999999986432 25899999999999999999999 99999999999999999999999
Q ss_pred EecccCceecCCCccc-cccccccccCcccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCCccccccchHHHhhhhc
Q 039290 902 LSDFGIAKILGKEESM-RQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFT-KKKPTDEIFAGEMSLKRWVGDS 979 (1049)
Q Consensus 902 l~DfGla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~ 979 (1049)
|+|||+++........ ......+++.|+|||.+.+..++.++||||+||++|||++ |..||......+..... ....
T Consensus 178 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~-~~~~ 256 (323)
T 3qup_A 178 VADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYL-IGGN 256 (323)
T ss_dssp ECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHH-HTTC
T ss_pred EeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHH-hcCC
Confidence 9999999876443321 2223456788999999998899999999999999999999 99999764333221111 1000
Q ss_pred cccCCcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhh
Q 039290 980 LLSCSITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETL 1043 (1049)
Q Consensus 980 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~ 1043 (1049)
....+..++.++.+++.+||+.||++|||++|+++.|+++....
T Consensus 257 --------------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~ 300 (323)
T 3qup_A 257 --------------------RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHL 300 (323)
T ss_dssp --------------------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred --------------------CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 01112234567999999999999999999999999999988743
No 127
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=359.27 Aligned_cols=276 Identities=24% Similarity=0.339 Sum_probs=202.9
Q ss_pred hcCCCCCceecCCCcEEEEEEEeCCCcEEEEEEeecccCCCHHHHHHHHHH--HhhcCCCceeeEEeeee-----cCCee
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLPDGMEIAAKVFHMEFDGSLESFHAECKV--MGSIRHRNLVKIISSCS-----NNDFK 832 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~--l~~l~hpniv~l~~~~~-----~~~~~ 832 (1049)
.++|++.+.||+|+||+||+|+. +++.||||++.... ...+..|.++ +..++||||+++++++. .....
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 87 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY 87 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence 46789999999999999999987 78999999997542 3445555555 44589999999998543 23467
Q ss_pred EEEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCC---------CeEEcCCCCCCeeecCCCceEEe
Q 039290 833 ALVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYST---------PIVHCDIKPSNVLLNESMVGHLS 903 (1049)
Q Consensus 833 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~---------~ivH~Dlkp~NIl~~~~~~~kl~ 903 (1049)
++||||+++|+|.+++.... .++..++.++.|+++||+||| +. ||+||||||+||+++.++.+||+
T Consensus 88 ~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~~L~~LH---~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~ 162 (336)
T 3g2f_A 88 LLVMEYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAYLH---TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVIS 162 (336)
T ss_dssp EEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHH---CCBCCGGGCBCCEECSSCSGGGEEECTTSCEEEC
T ss_pred EEEEecCCCCcHHHHHhhcc--cchhHHHHHHHHHHHHHHHHH---hhhccccccccceeecccccceEEEcCCCcEEEe
Confidence 89999999999999997655 488999999999999999999 88 99999999999999999999999
Q ss_pred cccCceecCCCc-------cccccccccccCcccccccCC-------CCcCcccchHHHHHHHHHHHhCCCCCCcccccc
Q 039290 904 DFGIAKILGKEE-------SMRQTKTLGTIGYMAPEYGRE-------GKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGE 969 (1049)
Q Consensus 904 DfGla~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~-------~~~~~~~DvwslG~il~elltg~~p~~~~~~~~ 969 (1049)
|||+++.+.... ........||+.|+|||++.+ ..++.++||||+||++|||++|..||.......
T Consensus 163 DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~ 242 (336)
T 3g2f_A 163 DFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVP 242 (336)
T ss_dssp CCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCC
T ss_pred eccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchh
Confidence 999998764322 112234568999999999876 456789999999999999999977764322211
Q ss_pred chHHHhhhhccccCCcchh----cccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhhh
Q 039290 970 MSLKRWVGDSLLSCSITEV----ADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETLS 1044 (1049)
Q Consensus 970 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~~ 1044 (1049)
.....+...........++ ..................++.++.+++.+||+.||++|||++|+++.|+++...+.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~ 321 (336)
T 3g2f_A 243 EYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWE 321 (336)
T ss_dssp CCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCC
T ss_pred HHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHH
Confidence 1111110000000000000 00000111111122234567789999999999999999999999999999987654
No 128
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=7e-39 Score=351.25 Aligned_cols=259 Identities=22% Similarity=0.363 Sum_probs=207.7
Q ss_pred hcCCCCCceecCCCcEEEEEEEeCC----CcEEEEEEeeccc-CCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEE
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLPD----GMEIAAKVFHMEF-DGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKAL 834 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 834 (1049)
.++|++.+.||+|+||.||+|++.+ +..||+|+++... ....+.+.+|++++++++||||+++++++.++ ..++
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~ 89 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTWI 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCEE
Confidence 4578889999999999999998532 3469999987653 22356789999999999999999999998754 5689
Q ss_pred EEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCC
Q 039290 835 VLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKE 914 (1049)
Q Consensus 835 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~ 914 (1049)
||||+++++|.+++...+..+++..++.++.|+++|++||| ++||+||||||+||+++.++.+||+|||++......
T Consensus 90 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 166 (281)
T 3cc6_A 90 IMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE 166 (281)
T ss_dssp EEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC---
T ss_pred EEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEECCCCcEEeCccCCCcccccc
Confidence 99999999999999877667899999999999999999999 999999999999999999999999999999876544
Q ss_pred ccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCCccccccchHHHhhhhccccCCcchhccccc
Q 039290 915 ESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFT-KKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANL 993 (1049)
Q Consensus 915 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1049)
.........+++.|+|||++.+..++.++||||+|+++|||++ |+.||......+..... ....
T Consensus 167 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~-~~~~-------------- 231 (281)
T 3cc6_A 167 DYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVL-EKGD-------------- 231 (281)
T ss_dssp ------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHH-HHTC--------------
T ss_pred cccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHH-hcCC--------------
Confidence 4333344556889999999988899999999999999999998 99999753332211110 0000
Q ss_pred ccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhh
Q 039290 994 LNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETL 1043 (1049)
Q Consensus 994 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~ 1043 (1049)
....+..+++.+.+++.+||+.||++|||++|++++|+++.+.-
T Consensus 232 ------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~ 275 (281)
T 3cc6_A 232 ------RLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQME 275 (281)
T ss_dssp ------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ------CCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhh
Confidence 00111234567899999999999999999999999999987653
No 129
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=3.4e-39 Score=377.56 Aligned_cols=257 Identities=28% Similarity=0.434 Sum_probs=207.3
Q ss_pred hcCCCCCceecCCCcEEEEEEEeCCCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEEecc
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLPDGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVLEYM 839 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 839 (1049)
.++|++.+.||+|+||.||+|++.++..||||+++... ...+++.+|++++++++||||+++++++.+ +..++||||+
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~ 260 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 260 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhh
Confidence 45688889999999999999999888899999997543 346789999999999999999999999876 6789999999
Q ss_pred CCCChhhhhhcC-CCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCcccc
Q 039290 840 SNGSLEKCLYSD-NYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEESMR 918 (1049)
Q Consensus 840 ~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~~~~ 918 (1049)
++|+|.+++... +..+++.++..++.|+++||+||| +++|+||||||+||+++.++.+||+|||+++.........
T Consensus 261 ~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 337 (452)
T 1fmk_A 261 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 337 (452)
T ss_dssp TTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC---------
T ss_pred cCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEECCCCCEEECCCccceecCCCceec
Confidence 999999999753 345899999999999999999999 9999999999999999999999999999998765433222
Q ss_pred ccccccccCcccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCCccccccchHHHhhhhccccCCcchhccccccccc
Q 039290 919 QTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFT-KKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLLNCE 997 (1049)
Q Consensus 919 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1049)
.....++..|+|||++.+..++.++|||||||++|||++ |+.||......+.. ..+..
T Consensus 338 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~--~~i~~------------------- 396 (452)
T 1fmk_A 338 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL--DQVER------------------- 396 (452)
T ss_dssp -----CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHH--HHHHT-------------------
T ss_pred ccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHH--HHHHc-------------------
Confidence 333456789999999988899999999999999999999 99999764322211 11100
Q ss_pred ccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHh
Q 039290 998 ENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRET 1042 (1049)
Q Consensus 998 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~ 1042 (1049)
..+.+.+..++..+.++|.+||+.||++|||++++++.|+++...
T Consensus 397 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~ 441 (452)
T 1fmk_A 397 GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 441 (452)
T ss_dssp TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred CCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhcc
Confidence 001112234677899999999999999999999999999987653
No 130
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=8.1e-39 Score=352.20 Aligned_cols=260 Identities=26% Similarity=0.431 Sum_probs=198.1
Q ss_pred hcCCCCCceecCCCcEEEEEEEeCCCcEEEEEEeecccCC--CHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEEe
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLPDGMEIAAKVFHMEFDG--SLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVLE 837 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 837 (1049)
.++|++.+.||+|+||+||+|+... .||+|+++..... ..+.+.+|++++++++||||+++++++ ..+..++|||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e 99 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ 99 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence 4579999999999999999998643 5999999765432 346789999999999999999999965 4556799999
Q ss_pred ccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCc-c
Q 039290 838 YMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEE-S 916 (1049)
Q Consensus 838 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~-~ 916 (1049)
|+++++|.+++......+++.+++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++....... .
T Consensus 100 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 176 (289)
T 3og7_A 100 WCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGS 176 (289)
T ss_dssp CCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEEECCCC-----------
T ss_pred ecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEECCCCCEEEccceecccccccccc
Confidence 99999999999877777999999999999999999999 9999999999999999999999999999998654322 2
Q ss_pred ccccccccccCcccccccC---CCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhccccc
Q 039290 917 MRQTKTLGTIGYMAPEYGR---EGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANL 993 (1049)
Q Consensus 917 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1049)
.......||+.|+|||++. +..++.++||||+|+++|||++|+.||......+..... ..........
T Consensus 177 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~-------- 247 (289)
T 3og7_A 177 HQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEM-VGRGSLSPDL-------- 247 (289)
T ss_dssp -------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHH-HHHTSCCCCT--------
T ss_pred ccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHH-hcccccCcch--------
Confidence 2223456899999999886 567888999999999999999999999764332221111 1111000000
Q ss_pred ccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHH
Q 039290 994 LNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRE 1041 (1049)
Q Consensus 994 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~ 1041 (1049)
......++.++.+++.+||+.+|++|||++|+++.|+++.+
T Consensus 248 -------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 248 -------SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp -------TSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred -------hhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 01112356789999999999999999999999999998754
No 131
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.3e-38 Score=348.63 Aligned_cols=250 Identities=24% Similarity=0.384 Sum_probs=188.5
Q ss_pred hcCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeeccc---CCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEE
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEF---DGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALV 835 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 835 (1049)
.++|++.+.||+|+||.||+|+. .+++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 45789999999999999999996 579999999996542 33457899999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCc
Q 039290 836 LEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEE 915 (1049)
Q Consensus 836 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~ 915 (1049)
|||+++++|.+++......+++.+++.++.|+++|++||| +.||+||||||+||+++.++.+||+|||++.......
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 166 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH 166 (278)
T ss_dssp EECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSSCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred EecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCC
Confidence 9999999999999887677999999999999999999999 9999999999999999999999999999998765332
Q ss_pred cccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhccccccc
Q 039290 916 SMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLLN 995 (1049)
Q Consensus 916 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1049)
. ......+++.|+|||++.+..++.++||||+|+++|||++|+.||......+... . ...
T Consensus 167 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-~-------------~~~----- 226 (278)
T 3cok_A 167 E-KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLN-K-------------VVL----- 226 (278)
T ss_dssp --------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-------------------CCS-----
T ss_pred C-cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHH-H-------------Hhh-----
Confidence 2 2233568999999999998889999999999999999999999997532211100 0 000
Q ss_pred ccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 996 CEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 996 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
.....+...+.++.+++.+||+.||++|||++|++++
T Consensus 227 ---~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 227 ---ADYEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp ---SCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred ---cccCCccccCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 0011112345678999999999999999999999875
No 132
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=5.8e-39 Score=349.90 Aligned_cols=252 Identities=19% Similarity=0.316 Sum_probs=207.1
Q ss_pred hcCCCCCceecCCCcEEEEEEEeCCCcEEEEEEeecccC--CCHHHHHHHHHHHhhcCCCceeeEEeeeecC--CeeEEE
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLPDGMEIAAKVFHMEFD--GSLESFHAECKVMGSIRHRNLVKIISSCSNN--DFKALV 835 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~--~~~~lv 835 (1049)
.++|+..+.||+|+||.||+|++ +++.||+|+++.... ...+.+.+|++++++++||||+++++++.+. +..++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEE-CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 35788999999999999999998 488999999976532 2346789999999999999999999999887 788999
Q ss_pred EeccCCCChhhhhhcCCC-ccCHHHHHHHHHHHHHHHHHhHccCCCC--eEEcCCCCCCeeecCCCceEEecccCceecC
Q 039290 836 LEYMSNGSLEKCLYSDNY-FLDILQRLKIMIDVASALEYLHFGYSTP--IVHCDIKPSNVLLNESMVGHLSDFGIAKILG 912 (1049)
Q Consensus 836 ~e~~~~g~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~ 912 (1049)
|||+++|+|.+++..... .+++.+++.++.|+++|++||| +.+ |+||||||+||+++.++.++++|||++....
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~ 164 (271)
T 3kmu_A 88 THWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH---TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ 164 (271)
T ss_dssp EECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHT---TSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS
T ss_pred ecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh---cCCCceecCCCccceEEEcCCcceeEEeccceeeec
Confidence 999999999999987654 5899999999999999999999 888 9999999999999999999999999876432
Q ss_pred CCccccccccccccCcccccccCCCCcCc---ccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhc
Q 039290 913 KEESMRQTKTLGTIGYMAPEYGREGKVSR---KCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVA 989 (1049)
Q Consensus 913 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~---~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 989 (1049)
. ....+|+.|+|||++.+..++. ++||||+||++|||++|+.||......+.........
T Consensus 165 ~------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~----------- 227 (271)
T 3kmu_A 165 S------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEG----------- 227 (271)
T ss_dssp C------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSC-----------
T ss_pred c------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcC-----------
Confidence 2 2346799999999988765544 7999999999999999999997643322211111100
Q ss_pred ccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHH
Q 039290 990 DANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRE 1041 (1049)
Q Consensus 990 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~ 1041 (1049)
.+...+..++.++.+++.+||+.||++|||++|+++.|+++.+
T Consensus 228 ---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 228 ---------LRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp ---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred ---------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 0011122356679999999999999999999999999998764
No 133
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=4.7e-39 Score=362.04 Aligned_cols=264 Identities=23% Similarity=0.379 Sum_probs=213.4
Q ss_pred HhcCCCCCceecCCCcEEEEEEEeCC------CcEEEEEEeecccC-CCHHHHHHHHHHHhhc-CCCceeeEEeeeecCC
Q 039290 759 ATDGFSENKLLGMGSFGSVYKGVLPD------GMEIAAKVFHMEFD-GSLESFHAECKVMGSI-RHRNLVKIISSCSNND 830 (1049)
Q Consensus 759 ~~~~~~~~~~lg~G~fg~Vy~a~~~~------~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~ 830 (1049)
..++|+..+.||+|+||.||+|.... ...||+|+++.... ...+.+.+|+++++++ +||||+++++++.+.+
T Consensus 44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 123 (333)
T 2i1m_A 44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGG 123 (333)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC
Confidence 45689999999999999999999542 24799999975432 2356789999999999 8999999999999999
Q ss_pred eeEEEEeccCCCChhhhhhcC-------------CCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCC
Q 039290 831 FKALVLEYMSNGSLEKCLYSD-------------NYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNES 897 (1049)
Q Consensus 831 ~~~lv~e~~~~g~L~~~l~~~-------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~ 897 (1049)
..++||||+++|+|.+++... ...+++..++.++.|++.||+||| +.||+||||||+||+++.+
T Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~ 200 (333)
T 2i1m_A 124 PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNG 200 (333)
T ss_dssp SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGCEEEGG
T ss_pred ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCcccceEEECCC
Confidence 999999999999999998753 234789999999999999999999 9999999999999999999
Q ss_pred CceEEecccCceecCCCccc-cccccccccCcccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCCccccccchHHHh
Q 039290 898 MVGHLSDFGIAKILGKEESM-RQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFT-KKKPTDEIFAGEMSLKRW 975 (1049)
Q Consensus 898 ~~~kl~DfGla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~ 975 (1049)
+.+||+|||++......... ......+++.|+|||++.+..++.++||||+||++|||++ |..||.......... ..
T Consensus 201 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~-~~ 279 (333)
T 2i1m_A 201 HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFY-KL 279 (333)
T ss_dssp GEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHH-HH
T ss_pred CeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHH-HH
Confidence 99999999999866433221 2233456789999999988899999999999999999999 999987643222211 11
Q ss_pred hhhccccCCcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhhhh
Q 039290 976 VGDSLLSCSITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETLSA 1045 (1049)
Q Consensus 976 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~~~ 1045 (1049)
..... ....+..++..+.+++.+||+.||.+|||++|++++|+++..+...
T Consensus 280 ~~~~~-------------------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~ 330 (333)
T 2i1m_A 280 VKDGY-------------------QMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDRR 330 (333)
T ss_dssp HHHTC-------------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred HhcCC-------------------CCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhhhc
Confidence 11000 0011122356789999999999999999999999999998877543
No 134
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=5.5e-39 Score=361.50 Aligned_cols=257 Identities=22% Similarity=0.264 Sum_probs=204.0
Q ss_pred cCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccCC---CHHHHHHHHHHHhhc-CCCceeeEEeeeecCCeeEEE
Q 039290 761 DGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFDG---SLESFHAECKVMGSI-RHRNLVKIISSCSNNDFKALV 835 (1049)
Q Consensus 761 ~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~~lv 835 (1049)
++|+..+.||+|+||.||+|+.. +++.||+|+++..... ..+.+.+|..+++++ +||||+++++++.+.+..++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 46888999999999999999965 6889999999765422 245678899999988 899999999999999999999
Q ss_pred EeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCc
Q 039290 836 LEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEE 915 (1049)
Q Consensus 836 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~ 915 (1049)
|||+++|+|.+++...+ .+++..++.++.||+.||+||| ++||+||||||+||+++.++.+||+|||+++......
T Consensus 89 ~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~ 164 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG 164 (345)
T ss_dssp ECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT
T ss_pred EeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEEeccccccccCCC
Confidence 99999999999987654 4899999999999999999999 9999999999999999999999999999998643222
Q ss_pred cccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhccccccc
Q 039290 916 SMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLLN 995 (1049)
Q Consensus 916 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1049)
. ......||+.|+|||++.+..++.++||||+||++|||++|+.||......+...... ...+.....
T Consensus 165 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~---------~~~~~~~i~-- 232 (345)
T 3a8x_A 165 D-TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNT---------EDYLFQVIL-- 232 (345)
T ss_dssp C-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------C---------HHHHHHHHH--
T ss_pred C-cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCccccccccccc---------HHHHHHHHH--
Confidence 1 2344679999999999999999999999999999999999999997532211100000 000000000
Q ss_pred ccccCchhhHHHHHHHHHHHhhccccCCCCCCCH------HHHHHH
Q 039290 996 CEENDFSAREQCVSSIFSLAMDCTVDLPEKRISM------KDVANR 1035 (1049)
Q Consensus 996 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~------~ell~~ 1035 (1049)
......+...+.++.+++.+||+.||++||++ +|+++|
T Consensus 233 --~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h 276 (345)
T 3a8x_A 233 --EKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 276 (345)
T ss_dssp --HCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred --cCCCCCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence 00111122356678999999999999999996 677665
No 135
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-38 Score=350.20 Aligned_cols=259 Identities=26% Similarity=0.449 Sum_probs=211.7
Q ss_pred cCCCCCc-eecCCCcEEEEEEEeC---CCcEEEEEEeecccC-CCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEE
Q 039290 761 DGFSENK-LLGMGSFGSVYKGVLP---DGMEIAAKVFHMEFD-GSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALV 835 (1049)
Q Consensus 761 ~~~~~~~-~lg~G~fg~Vy~a~~~---~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 835 (1049)
++|.+.+ .||+|+||.||+|.+. ++..||+|+++.... ...+.+.+|++++++++||||+++++++ ..+..++|
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv 87 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV 87 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence 3455555 9999999999999853 677899999976432 2356789999999999999999999999 45568999
Q ss_pred EeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCc
Q 039290 836 LEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEE 915 (1049)
Q Consensus 836 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~ 915 (1049)
|||+++++|.+++......+++.+++.++.|+++|++||| +.||+||||||+||+++.++.+||+|||++.......
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~ 164 (287)
T 1u59_A 88 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADD 164 (287)
T ss_dssp EECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCS
T ss_pred EEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCchheEEEcCCCCEEECcccceeeeccCc
Confidence 9999999999999877777999999999999999999999 9999999999999999999999999999998775433
Q ss_pred cc--cccccccccCcccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCCccccccchHHHhhhhccccCCcchhcccc
Q 039290 916 SM--RQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFT-KKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADAN 992 (1049)
Q Consensus 916 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 992 (1049)
.. ......+|+.|+|||++.+..++.++||||+|+++|||++ |+.||......+ ....+...
T Consensus 165 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~~~i~~~------------- 229 (287)
T 1u59_A 165 SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE--VMAFIEQG------------- 229 (287)
T ss_dssp CEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH--HHHHHHTT-------------
T ss_pred ceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH--HHHHHhcC-------------
Confidence 22 1223346789999999988889999999999999999998 999997643222 11111100
Q ss_pred cccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhhh
Q 039290 993 LLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETLS 1044 (1049)
Q Consensus 993 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~~ 1044 (1049)
.+...+..++.++.+++.+||+.||++||++.|++++|+++..+..
T Consensus 230 ------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 275 (287)
T 1u59_A 230 ------KRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLA 275 (287)
T ss_dssp ------CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred ------CcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence 0011123456789999999999999999999999999999987653
No 136
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=4.8e-39 Score=357.76 Aligned_cols=245 Identities=24% Similarity=0.230 Sum_probs=196.6
Q ss_pred cCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccCCC--HHHHHHHHHHHhhc-CCCceeeEEeeeecCCeeEEEE
Q 039290 761 DGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFDGS--LESFHAECKVMGSI-RHRNLVKIISSCSNNDFKALVL 836 (1049)
Q Consensus 761 ~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~~lv~ 836 (1049)
++|+..++||+|+||+||+|+.. +++.||||++....... .....+|+..+.++ +||||+++++++.+++..++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 47999999999999999999975 79999999986543322 23445566665555 8999999999999999999999
Q ss_pred eccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCcc
Q 039290 837 EYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEES 916 (1049)
Q Consensus 837 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~~ 916 (1049)
||+ +++|.+++...+..+++.+++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 137 e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~- 211 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG- 211 (311)
T ss_dssp ECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECGGGCEEECCCTTCEECC----
T ss_pred ecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEccceeeeecccCC-
Confidence 999 66999988877777999999999999999999999 8999999999999999999999999999998765433
Q ss_pred ccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhcccccccc
Q 039290 917 MRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLLNC 996 (1049)
Q Consensus 917 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1049)
......||+.|+|||++.+ .++.++||||+||++|||++|..|+... ..........
T Consensus 212 -~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~----~~~~~~~~~~----------------- 268 (311)
T 3p1a_A 212 -AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG----EGWQQLRQGY----------------- 268 (311)
T ss_dssp ----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH----HHHHHHTTTC-----------------
T ss_pred -CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCc----cHHHHHhccC-----------------
Confidence 2234568999999998875 7999999999999999999997665431 1111111000
Q ss_pred cccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 997 EENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 997 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
.....+..++.++.+++.+||+.||++|||++|++++
T Consensus 269 --~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 269 --LPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp --CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred --CCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 0111223456789999999999999999999999875
No 137
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=352.83 Aligned_cols=255 Identities=27% Similarity=0.434 Sum_probs=201.3
Q ss_pred cCCCCCceecCCCcEEEEEEEeCCCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEEeccC
Q 039290 761 DGFSENKLLGMGSFGSVYKGVLPDGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVLEYMS 840 (1049)
Q Consensus 761 ~~~~~~~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 840 (1049)
++|++.+.||+|+||+||+|++ .++.||+|++... ...+.+.+|++++++++||||+++++++.+ ..++||||++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~ 82 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAE 82 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEE-TTEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCT
T ss_pred hHeeeeeEeecCCCceEEEEEE-CCeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCC
Confidence 4688889999999999999998 4788999998643 345789999999999999999999998874 4789999999
Q ss_pred CCChhhhhhcCCC--ccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCc-eEEecccCceecCCCccc
Q 039290 841 NGSLEKCLYSDNY--FLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMV-GHLSDFGIAKILGKEESM 917 (1049)
Q Consensus 841 ~g~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~-~kl~DfGla~~~~~~~~~ 917 (1049)
+|+|.+++..... .+++.+++.++.|+++|++|||+.+.+||+||||||+||+++.++. +||+|||++......
T Consensus 83 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~--- 159 (307)
T 2eva_A 83 GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH--- 159 (307)
T ss_dssp TCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC----------
T ss_pred CCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc---
Confidence 9999999986553 4788999999999999999999222289999999999999998876 799999999765332
Q ss_pred cccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhccccccccc
Q 039290 918 RQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLLNCE 997 (1049)
Q Consensus 918 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1049)
.....||+.|+|||++.+..++.++||||+|+++|||++|+.||.................
T Consensus 160 -~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~------------------ 220 (307)
T 2eva_A 160 -MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNG------------------ 220 (307)
T ss_dssp ------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTT------------------
T ss_pred -cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcC------------------
Confidence 2234689999999999998999999999999999999999999975432221111111000
Q ss_pred ccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhh
Q 039290 998 ENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETL 1043 (1049)
Q Consensus 998 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~ 1043 (1049)
.+......++..+.+++.+||+.||++|||++|++++|+++.+.+
T Consensus 221 -~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 265 (307)
T 2eva_A 221 -TRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYF 265 (307)
T ss_dssp -CCCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGC
T ss_pred -CCCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhc
Confidence 001111234567899999999999999999999999999987654
No 138
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.9e-38 Score=359.88 Aligned_cols=254 Identities=23% Similarity=0.238 Sum_probs=196.4
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEEec
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVLEY 838 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 838 (1049)
.++|++.+.||+|+||+||+|+.. +++.||+|++.... ...+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 97 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence 457999999999999999999965 78999999997543 3346789999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCc--eEEecccCceecCCCcc
Q 039290 839 MSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMV--GHLSDFGIAKILGKEES 916 (1049)
Q Consensus 839 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~--~kl~DfGla~~~~~~~~ 916 (1049)
+++|+|.+++...+ .+++.+++.++.|+++||+||| ++||+||||||+||+++.++. +||+|||+++......
T Consensus 98 ~~~~~L~~~l~~~~-~~~~~~~~~i~~ql~~~L~~LH---~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~- 172 (361)
T 3uc3_A 98 ASGGELYERICNAG-RFSEDEARFFFQQLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS- 172 (361)
T ss_dssp CCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCSCCCCGGGEEECSSSSCCEEECCCCCC--------
T ss_pred CCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCceEEEeecCccccccccC-
Confidence 99999999987654 4899999999999999999999 999999999999999987665 9999999997543222
Q ss_pred ccccccccccCcccccccCCCCcCcc-cchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhccccccc
Q 039290 917 MRQTKTLGTIGYMAPEYGREGKVSRK-CDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLLN 995 (1049)
Q Consensus 917 ~~~~~~~~~~~y~aPE~~~~~~~~~~-~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1049)
......||+.|+|||++.+..++.+ +||||+||++|||++|+.||............... .....
T Consensus 173 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~-~~~~~------------ 238 (361)
T 3uc3_A 173 -QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQR-ILSVK------------ 238 (361)
T ss_dssp ---------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHH-HHTTC------------
T ss_pred -CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHH-HhcCC------------
Confidence 2234578999999999988777655 89999999999999999999764333222211110 00000
Q ss_pred ccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 039290 996 CEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRL 1036 (1049)
Q Consensus 996 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L 1036 (1049)
...+.....+.++.+++.+||+.||++|||++|+++|-
T Consensus 239 ---~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp 276 (361)
T 3uc3_A 239 ---YSIPDDIRISPECCHLISRIFVADPATRISIPEIKTHS 276 (361)
T ss_dssp ---CCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSH
T ss_pred ---CCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhCc
Confidence 00011112356789999999999999999999999873
No 139
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=356.95 Aligned_cols=263 Identities=24% Similarity=0.407 Sum_probs=207.7
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcE----EEEEEeeccc-CCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeE
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGME----IAAKVFHMEF-DGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKA 833 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~----vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~ 833 (1049)
.++|++.+.||+|+||+||+|++. +++. ||+|.+.... ....+.+.+|+.++++++||||+++++++.+.+ .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 357899999999999999999954 4544 5777765432 445678999999999999999999999998765 78
Q ss_pred EEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCC
Q 039290 834 LVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGK 913 (1049)
Q Consensus 834 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~ 913 (1049)
+|+||+.+|+|.+++......+++..++.++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++....
T Consensus 93 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~ 169 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTC------
T ss_pred EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccC
Confidence 999999999999999887777999999999999999999999 99999999999999999999999999999987643
Q ss_pred Ccc-ccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCCccccccchHHHhhhhccccCCcchhccc
Q 039290 914 EES-MRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFT-KKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADA 991 (1049)
Q Consensus 914 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 991 (1049)
... .......+|+.|+|||++.+..++.++||||+||++|||++ |..||......+... .....
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~--~~~~~------------ 235 (327)
T 3lzb_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS--ILEKG------------ 235 (327)
T ss_dssp ----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHH--HHHTT------------
T ss_pred ccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH--HHHcC------------
Confidence 332 12223456778999999999999999999999999999999 999997643332211 11000
Q ss_pred ccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhhhhcc
Q 039290 992 NLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETLSAYI 1047 (1049)
Q Consensus 992 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~~~~~ 1047 (1049)
.....+..++.++.+++.+||+.||++|||++|+++.|+++.+.-..++
T Consensus 236 -------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~~ 284 (327)
T 3lzb_A 236 -------ERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDPQRYL 284 (327)
T ss_dssp -------CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTSHHHHB
T ss_pred -------CCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhCcCceE
Confidence 0111122355678999999999999999999999999999987665554
No 140
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=1e-38 Score=351.67 Aligned_cols=251 Identities=23% Similarity=0.349 Sum_probs=205.4
Q ss_pred cCCCCCceecCCCcEEEEEEEeC-CC-------cEEEEEEeecccCCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCee
Q 039290 761 DGFSENKLLGMGSFGSVYKGVLP-DG-------MEIAAKVFHMEFDGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFK 832 (1049)
Q Consensus 761 ~~~~~~~~lg~G~fg~Vy~a~~~-~~-------~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~ 832 (1049)
++|++.+.||+|+||+||+|+.. ++ ..||+|++........+.+.+|++++++++||||+++++++.+++..
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN 87 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence 46888999999999999999854 33 47999999776666678899999999999999999999999999999
Q ss_pred EEEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCc--------eEEec
Q 039290 833 ALVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMV--------GHLSD 904 (1049)
Q Consensus 833 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~--------~kl~D 904 (1049)
++||||+++|+|.+++......+++..++.++.|+++||+||| +++|+||||||+||+++.++. +||+|
T Consensus 88 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~D 164 (289)
T 4fvq_A 88 ILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSD 164 (289)
T ss_dssp EEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECC
T ss_pred EEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHh---hCCeECCCcCcceEEEecCCcccccccceeeecc
Confidence 9999999999999999887777999999999999999999999 999999999999999998876 99999
Q ss_pred ccCceecCCCccccccccccccCcccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccC
Q 039290 905 FGIAKILGKEESMRQTKTLGTIGYMAPEYGRE-GKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSC 983 (1049)
Q Consensus 905 fGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 983 (1049)
||++...... ....+++.|+|||++.+ ..++.++||||+||++|||++|..|+............+....
T Consensus 165 fg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~---- 235 (289)
T 4fvq_A 165 PGISITVLPK-----DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRH---- 235 (289)
T ss_dssp CCSCTTTSCH-----HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTC----
T ss_pred CcccccccCc-----cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhccC----
Confidence 9998754322 22457889999999887 6789999999999999999996554433222111111111000
Q ss_pred CcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHH
Q 039290 984 SITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRE 1041 (1049)
Q Consensus 984 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~ 1041 (1049)
..+...+.++.+++.+||+.||++|||++|++++|+++..
T Consensus 236 ------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~ 275 (289)
T 4fvq_A 236 ------------------QLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT 275 (289)
T ss_dssp ------------------CCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred ------------------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 0001123457899999999999999999999999997754
No 141
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=357.32 Aligned_cols=276 Identities=25% Similarity=0.411 Sum_probs=216.1
Q ss_pred hcCCCCCceecCCCcEEEEEEEe-----CCCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCceeeEEeeeecCC--ee
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVL-----PDGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRNLVKIISSCSNND--FK 832 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~--~~ 832 (1049)
.++|++.+.||+|+||.||+|++ .+++.||+|++........+.+.+|++++++++||||+++++++...+ ..
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 34688899999999999999983 368899999998665555678999999999999999999999986644 78
Q ss_pred EEEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecC
Q 039290 833 ALVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILG 912 (1049)
Q Consensus 833 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~ 912 (1049)
++||||+++++|.+++...+..+++.+++.++.|+++||+||| +.||+||||||+||+++.++.+||+|||++....
T Consensus 120 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~ 196 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLP 196 (326)
T ss_dssp EEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEEcCCCcEEEecCcchhhcc
Confidence 9999999999999999887777999999999999999999999 9999999999999999999999999999998775
Q ss_pred CCccc--cccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCc-chhc
Q 039290 913 KEESM--RQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSI-TEVA 989 (1049)
Q Consensus 913 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 989 (1049)
..... ......++..|+|||.+.+..++.++||||+|+++|||++|..||...... .....+........ ..+.
T Consensus 197 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 273 (326)
T 2w1i_A 197 QDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE---FMRMIGNDKQGQMIVFHLI 273 (326)
T ss_dssp SSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHH---HHHHHCTTCCTHHHHHHHH
T ss_pred ccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHH---HHHhhccccchhhhHHHHH
Confidence 44321 122345677899999998888999999999999999999999987642110 00000000000000 0000
Q ss_pred ccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhhh
Q 039290 990 DANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETLS 1044 (1049)
Q Consensus 990 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~~ 1044 (1049)
. .+. ...+...+..++.++.+++.+||+.||++|||+.|+++.|+++++++.
T Consensus 274 ~-~~~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~l~ 325 (326)
T 2w1i_A 274 E-LLK--NNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQMA 325 (326)
T ss_dssp H-HHH--TTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred H-Hhh--cCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhc
Confidence 0 000 001112234466789999999999999999999999999999998874
No 142
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=2.3e-38 Score=346.37 Aligned_cols=251 Identities=24% Similarity=0.308 Sum_probs=208.5
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEEec
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVLEY 838 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 838 (1049)
.++|++.+.||+|+||.||+|+.. ++..||+|++........+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 356899999999999999999965 5779999999877667788999999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeee---cCCCceEEecccCceecCCCc
Q 039290 839 MSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLL---NESMVGHLSDFGIAKILGKEE 915 (1049)
Q Consensus 839 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~---~~~~~~kl~DfGla~~~~~~~ 915 (1049)
+++++|.+++...+ .+++.+++.++.|++.|++||| ++||+||||||+||++ +.++.+||+|||++.......
T Consensus 88 ~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~ 163 (277)
T 3f3z_A 88 CTGGELFERVVHKR-VFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK 163 (277)
T ss_dssp CCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS
T ss_pred cCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc
Confidence 99999999887654 4899999999999999999999 9999999999999999 788999999999998775433
Q ss_pred cccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhccccccc
Q 039290 916 SMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLLN 995 (1049)
Q Consensus 916 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1049)
. .....+|+.|+|||++.+ .++.++||||+|+++|||++|+.||......+..... ....
T Consensus 164 ~--~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~-~~~~---------------- 223 (277)
T 3f3z_A 164 M--MRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKI-REGT---------------- 223 (277)
T ss_dssp C--BCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH-HHCC----------------
T ss_pred c--hhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHH-HhCC----------------
Confidence 2 234568999999998865 4899999999999999999999999763322211111 0000
Q ss_pred ccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 996 CEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 996 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
..........++.++.+++.+|++.||++|||+.|++++
T Consensus 224 -~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 224 -FTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp -CCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred -CCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000001112356789999999999999999999999986
No 143
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.8e-38 Score=365.16 Aligned_cols=273 Identities=18% Similarity=0.220 Sum_probs=206.8
Q ss_pred hcCCCCCceecCC--CcEEEEEEEeC-CCcEEEEEEeecccCC--CHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEE
Q 039290 760 TDGFSENKLLGMG--SFGSVYKGVLP-DGMEIAAKVFHMEFDG--SLESFHAECKVMGSIRHRNLVKIISSCSNNDFKAL 834 (1049)
Q Consensus 760 ~~~~~~~~~lg~G--~fg~Vy~a~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 834 (1049)
.++|++.+.||+| +||+||+|+.. +++.||||+++..... ..+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 4578999999999 99999999965 7999999999765422 34678889999999999999999999999999999
Q ss_pred EEeccCCCChhhhhhcC-CCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCC
Q 039290 835 VLEYMSNGSLEKCLYSD-NYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGK 913 (1049)
Q Consensus 835 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~ 913 (1049)
||||+++|+|.+++... ...+++..++.++.||+.||+||| +.||+||||||+||+++.++.+||+|||.+.....
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~ 180 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMIS 180 (389)
T ss_dssp EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence 99999999999998764 245899999999999999999999 99999999999999999999999999999875432
Q ss_pred Ccc------ccccccccccCcccccccCC--CCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCc
Q 039290 914 EES------MRQTKTLGTIGYMAPEYGRE--GKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSI 985 (1049)
Q Consensus 914 ~~~------~~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 985 (1049)
... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+....+.....+.+........
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 260 (389)
T 3gni_B 181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDT 260 (389)
T ss_dssp TTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-----------
T ss_pred ccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccc
Confidence 211 11223468899999999887 6789999999999999999999999976443333222211111000000
Q ss_pred chhc-----------------ccccc-------cccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 986 TEVA-----------------DANLL-------NCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 986 ~~~~-----------------~~~~~-------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
.... ..... .........+..++.++.+++.+||+.||++|||++|+++|
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 261 STIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp ---------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred cccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 0000 00000 00000112234456789999999999999999999999977
No 144
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=1.8e-38 Score=357.14 Aligned_cols=261 Identities=24% Similarity=0.441 Sum_probs=212.5
Q ss_pred hcCCCCCceecCCCcEEEEEEEe--------CCCcEEEEEEeecccC-CCHHHHHHHHHHHhhc-CCCceeeEEeeeecC
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVL--------PDGMEIAAKVFHMEFD-GSLESFHAECKVMGSI-RHRNLVKIISSCSNN 829 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~--------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~ 829 (1049)
.++|++.+.||+|+||.||+|+. .++..||+|+++.... ...+.+.+|+++++++ +||||+++++++.+.
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 45788999999999999999986 3567899999975432 2346788999999999 899999999999999
Q ss_pred CeeEEEEeccCCCChhhhhhcCCC---------------ccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeee
Q 039290 830 DFKALVLEYMSNGSLEKCLYSDNY---------------FLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLL 894 (1049)
Q Consensus 830 ~~~~lv~e~~~~g~L~~~l~~~~~---------------~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~ 894 (1049)
+..++||||+++|+|.+++..... .+++.+++.++.|+++||+||| +.||+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCccceEEE
Confidence 999999999999999999976542 4889999999999999999999 9999999999999999
Q ss_pred cCCCceEEecccCceecCCCccc-cccccccccCcccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCCccccccchH
Q 039290 895 NESMVGHLSDFGIAKILGKEESM-RQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFT-KKKPTDEIFAGEMSL 972 (1049)
Q Consensus 895 ~~~~~~kl~DfGla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~ 972 (1049)
+.++.+||+|||++......... ......+++.|+|||++.+..++.++||||+||++|||++ |..||......+.
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~-- 268 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL-- 268 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH--
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHH--
Confidence 99999999999999876543321 2223456788999999988889999999999999999999 9999976322211
Q ss_pred HHhhhhccccCCcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhhh
Q 039290 973 KRWVGDSLLSCSITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETLS 1044 (1049)
Q Consensus 973 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~~ 1044 (1049)
........ +...+..++.++.+++.+||+.||++|||++|++++|+++.....
T Consensus 269 ~~~~~~~~-------------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~ 321 (334)
T 2pvf_A 269 FKLLKEGH-------------------RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321 (334)
T ss_dssp HHHHHHTC-------------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred HHHHhcCC-------------------CCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccc
Confidence 11110000 011112355678999999999999999999999999999987653
No 145
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=359.61 Aligned_cols=251 Identities=23% Similarity=0.286 Sum_probs=191.9
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEEec
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVLEY 838 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 838 (1049)
.++|++.+.||+|+||.||+|+.. +++.||+|+++... ..+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 129 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLEL 129 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEe
Confidence 467899999999999999999975 68899999997543 346788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecC---CCceEEecccCceecCCCc
Q 039290 839 MSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNE---SMVGHLSDFGIAKILGKEE 915 (1049)
Q Consensus 839 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~---~~~~kl~DfGla~~~~~~~ 915 (1049)
+++|+|.+++...+ .+++.+++.++.|+++||+||| +.||+||||||+||+++. ++.+||+|||+++......
T Consensus 130 ~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 205 (349)
T 2w4o_A 130 VTGGELFDRIVEKG-YYSERDAADAVKQILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV 205 (349)
T ss_dssp CCSCBHHHHHTTCS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESSSSTTCCEEECCCC---------
T ss_pred CCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCcccEEEecCCCCCCEEEccCccccccCccc
Confidence 99999999987654 4899999999999999999999 999999999999999975 8899999999998664322
Q ss_pred cccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhccccccc
Q 039290 916 SMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLLN 995 (1049)
Q Consensus 916 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1049)
......||+.|+|||++.+..++.++||||+||++|||++|..||......+............
T Consensus 206 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~-------------- 269 (349)
T 2w4o_A 206 --LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYY-------------- 269 (349)
T ss_dssp ---------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCC--------------
T ss_pred --ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCc--------------
Confidence 2234568999999999999899999999999999999999999997543332222221110000
Q ss_pred ccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 996 CEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 996 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
...+.....+.++.+++.+||+.||++|||+.|++++
T Consensus 270 ---~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 270 ---FISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp ---CCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ---cCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0001112345678999999999999999999999986
No 146
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=9.9e-39 Score=359.82 Aligned_cols=250 Identities=21% Similarity=0.282 Sum_probs=206.4
Q ss_pred HhcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeeccc---CCCHHHHHHHHHHHhhc-CCCceeeEEeeeecCCeeE
Q 039290 759 ATDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEF---DGSLESFHAECKVMGSI-RHRNLVKIISSCSNNDFKA 833 (1049)
Q Consensus 759 ~~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~~ 833 (1049)
..++|+..+.||+|+||+||+|+.. +++.||+|+++... ....+.+.+|.+++..+ +||+|+++++++.+.+..|
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 3568999999999999999999975 57889999997642 44567788999999988 7999999999999999999
Q ss_pred EEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCC
Q 039290 834 LVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGK 913 (1049)
Q Consensus 834 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~ 913 (1049)
+||||+++|+|.+++...+ .+++.+++.++.||+.||+||| ++||+||||||+||+++.++.+||+|||+++....
T Consensus 98 lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 173 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 173 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEEcCCCcEEEEeCCccccccc
Confidence 9999999999999987654 4899999999999999999999 99999999999999999999999999999986432
Q ss_pred CccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhccccc
Q 039290 914 EESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANL 993 (1049)
Q Consensus 914 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1049)
.. .......||+.|+|||++.+..++.++||||+||++|||++|+.||......+. ...... .
T Consensus 174 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~-~~~i~~-------------~-- 236 (353)
T 2i0e_A 174 DG-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL-FQSIME-------------H-- 236 (353)
T ss_dssp TT-CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHH-------------C--
T ss_pred CC-cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHH-HHHHHh-------------C--
Confidence 22 223446799999999999999999999999999999999999999975322211 111100 0
Q ss_pred ccccccCchhhHHHHHHHHHHHhhccccCCCCCCC-----HHHHHHH
Q 039290 994 LNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRIS-----MKDVANR 1035 (1049)
Q Consensus 994 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt-----~~ell~~ 1035 (1049)
....+...+.++.+++.+|++.||++||+ ++|+++|
T Consensus 237 ------~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 237 ------NVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp ------CCCCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred ------CCCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 01111234567899999999999999995 5777765
No 147
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.2e-38 Score=356.98 Aligned_cols=249 Identities=22% Similarity=0.292 Sum_probs=196.3
Q ss_pred hcCCCCCceecCCCcEEEEEEEe----CCCcEEEEEEeeccc----CCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCe
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVL----PDGMEIAAKVFHMEF----DGSLESFHAECKVMGSIRHRNLVKIISSCSNNDF 831 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~ 831 (1049)
.++|++.+.||+|+||.||+|+. .+++.||+|+++... ......+.+|+++++.++||||+++++++.+.+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 35789999999999999999996 478999999997542 2234567889999999999999999999999999
Q ss_pred eEEEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceec
Q 039290 832 KALVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKIL 911 (1049)
Q Consensus 832 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~ 911 (1049)
.++||||+++++|.+++...+ .+++.++..++.||+.||+||| ++||+||||||+||+++.++.+||+|||+++..
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 171 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREG-IFMEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKES 171 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTSCEEECCCSCC---
T ss_pred EEEEEeCCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHH---hCCEEcccCCHHHeEECCCCcEEEEeCCccccc
Confidence 999999999999999987654 4889999999999999999999 999999999999999999999999999999764
Q ss_pred CCCccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhccc
Q 039290 912 GKEESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADA 991 (1049)
Q Consensus 912 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 991 (1049)
..... ......||+.|+|||++.+..++.++||||+||++|||++|+.||......+.. ......
T Consensus 172 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~-~~i~~~------------- 236 (327)
T 3a62_A 172 IHDGT-VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTI-DKILKC------------- 236 (327)
T ss_dssp --------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH-HHHHHT-------------
T ss_pred ccCCc-cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHH-HHHHhC-------------
Confidence 33222 223457899999999999889999999999999999999999999753222111 110000
Q ss_pred ccccccccCchhhHHHHHHHHHHHhhccccCCCCCC-----CHHHHHHH
Q 039290 992 NLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRI-----SMKDVANR 1035 (1049)
Q Consensus 992 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----t~~ell~~ 1035 (1049)
....+...+.++.+++.+||+.||++|| +++|+++|
T Consensus 237 --------~~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 237 --------KLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp --------CCCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred --------CCCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 0011123456789999999999999999 78888876
No 148
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=3.5e-38 Score=352.74 Aligned_cols=252 Identities=22% Similarity=0.277 Sum_probs=208.0
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccCC------CHHHHHHHHHHHhhcCCCceeeEEeeeecCCee
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFDG------SLESFHAECKVMGSIRHRNLVKIISSCSNNDFK 832 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~ 832 (1049)
.++|++.+.||+|+||.||+|+.. +|+.||+|+++..... ..+.+.+|++++++++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 346889999999999999999965 6899999999765422 357899999999999999999999999999999
Q ss_pred EEEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCC----ceEEecccCc
Q 039290 833 ALVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESM----VGHLSDFGIA 908 (1049)
Q Consensus 833 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~----~~kl~DfGla 908 (1049)
++||||+++++|.+++.... .+++..++.++.|+++||+||| +.||+||||||+||+++.++ .+||+|||++
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH---~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~ 166 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (321)
T ss_dssp EEEECCCCSCBHHHHHHTCS-CEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCTTC
T ss_pred EEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChHHEEEecCCCCcCCEEEccCccc
Confidence 99999999999999997654 5899999999999999999999 99999999999999999887 7999999999
Q ss_pred eecCCCccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchh
Q 039290 909 KILGKEESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEV 988 (1049)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 988 (1049)
....... ......||+.|+|||++.+..++.++||||+||++|||++|..||......+.. ......
T Consensus 167 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~i~~~---------- 233 (321)
T 2a2a_A 167 HEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL-ANITSV---------- 233 (321)
T ss_dssp EECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHH-HHHHTT----------
T ss_pred eecCccc--cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHH-HHHHhc----------
Confidence 8765432 223456899999999999889999999999999999999999999753222111 111000
Q ss_pred cccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 989 ADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 989 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
............+..+.+++.+|++.||++|||++|+++|
T Consensus 234 -------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 234 -------SYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp -------CCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred -------ccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0000111122345678999999999999999999999986
No 149
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=2.4e-38 Score=369.47 Aligned_cols=248 Identities=25% Similarity=0.386 Sum_probs=207.5
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeeccc---CCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEE
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEF---DGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALV 835 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 835 (1049)
.++|.+.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 357899999999999999999965 79999999997542 33457899999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCc
Q 039290 836 LEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEE 915 (1049)
Q Consensus 836 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~ 915 (1049)
|||+++|+|.+++...+ .+++.+++.++.||+.|++||| +.||+||||||+||+++.++.+||+|||++.......
T Consensus 95 ~E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~ 170 (476)
T 2y94_A 95 MEYVSGGELFDYICKNG-RLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 170 (476)
T ss_dssp EECCSSEEHHHHTTSSS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC
T ss_pred EeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCcccccHHHEEEecCCCeEEEeccchhhccccc
Confidence 99999999999987654 4899999999999999999999 9999999999999999999999999999998765432
Q ss_pred cccccccccccCcccccccCCCCc-CcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhcccccc
Q 039290 916 SMRQTKTLGTIGYMAPEYGREGKV-SRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLL 994 (1049)
Q Consensus 916 ~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1049)
......||+.|+|||++.+..+ +.++||||+||++|||++|+.||......+.. ......
T Consensus 171 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~-~~i~~~---------------- 231 (476)
T 2y94_A 171 --FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLF-KKICDG---------------- 231 (476)
T ss_dssp --CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHH-HHHHTT----------------
T ss_pred --cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHH-HHHhcC----------------
Confidence 2334578999999999988765 68999999999999999999999753222111 111000
Q ss_pred cccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 995 NCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 995 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
.+..+...+.++.+++.+||+.||++|||++|+++|
T Consensus 232 -----~~~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 232 -----IFYTPQYLNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp -----CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred -----CcCCCccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 001112245678999999999999999999999986
No 150
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.3e-38 Score=364.45 Aligned_cols=277 Identities=22% Similarity=0.244 Sum_probs=215.5
Q ss_pred cCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeeccc-CCCHHHHHHHHHHHhhcCCCceeeEEeeeecCC--eeEEEE
Q 039290 761 DGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEF-DGSLESFHAECKVMGSIRHRNLVKIISSCSNND--FKALVL 836 (1049)
Q Consensus 761 ~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~--~~~lv~ 836 (1049)
++|++.+.||+|+||+||+|+.. +++.||+|+++... ....+.+.+|++++++++||||+++++++.+.+ ..++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 46889999999999999999965 58999999997543 344677889999999999999999999988755 779999
Q ss_pred eccCCCChhhhhhcCCC--ccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeee----cCCCceEEecccCcee
Q 039290 837 EYMSNGSLEKCLYSDNY--FLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLL----NESMVGHLSDFGIAKI 910 (1049)
Q Consensus 837 e~~~~g~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~----~~~~~~kl~DfGla~~ 910 (1049)
||+++|+|.+++..... .+++.+++.++.|++.||+||| +.||+||||||+||++ +.++.+||+|||+++.
T Consensus 89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~ 165 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (396)
T ss_dssp CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEE
T ss_pred ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCcCHHHEEEeecCCCceeEEEecCCCceE
Confidence 99999999999876433 3899999999999999999999 9999999999999999 7778899999999987
Q ss_pred cCCCccccccccccccCcccccccCC--------CCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhc--c
Q 039290 911 LGKEESMRQTKTLGTIGYMAPEYGRE--------GKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDS--L 980 (1049)
Q Consensus 911 ~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~--~ 980 (1049)
..... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||................. .
T Consensus 166 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~ 243 (396)
T 4eut_A 166 LEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGK 243 (396)
T ss_dssp CCCGG--GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSC
T ss_pred ccCCC--ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCC
Confidence 65433 2234568999999998764 5678899999999999999999999975433222211111111 0
Q ss_pred ccCCcchhccc---c--cccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHh
Q 039290 981 LSCSITEVADA---N--LLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRET 1042 (1049)
Q Consensus 981 ~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~ 1042 (1049)
....+...... . ...............+..+.+++.+||+.||++||+++|+++.++++..+
T Consensus 244 p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 244 PSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp CTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred CcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 00111100000 0 00001111223366788899999999999999999999999999998764
No 151
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-38 Score=356.40 Aligned_cols=262 Identities=26% Similarity=0.471 Sum_probs=207.4
Q ss_pred cCCCCCceecCCCcEEEEEEEeCC-----CcEEEEEEeecccC-CCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEE
Q 039290 761 DGFSENKLLGMGSFGSVYKGVLPD-----GMEIAAKVFHMEFD-GSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKAL 834 (1049)
Q Consensus 761 ~~~~~~~~lg~G~fg~Vy~a~~~~-----~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 834 (1049)
.+|+..+.||+|+||.||+|+... +..||+|+++.... .....+.+|++++++++||||+++++++.+.+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 457778999999999999998542 24599999975432 234578899999999999999999999999999999
Q ss_pred EEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCC
Q 039290 835 VLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKE 914 (1049)
Q Consensus 835 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~ 914 (1049)
||||+++|+|.+++......+++.+++.++.|+++||+||| +.||+||||||+||+++.++.+||+|||++......
T Consensus 124 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 200 (333)
T 1mqb_A 124 ITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 200 (333)
T ss_dssp EEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChheEEECCCCcEEECCCCcchhhccc
Confidence 99999999999999887677999999999999999999999 999999999999999999999999999999876533
Q ss_pred ccc--cccccccccCcccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCCccccccchHHHhhhhccccCCcchhccc
Q 039290 915 ESM--RQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFT-KKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADA 991 (1049)
Q Consensus 915 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 991 (1049)
... ......+++.|+|||++.+..++.++||||+||++|||++ |+.||......+. ...+...
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~--~~~~~~~------------ 266 (333)
T 1mqb_A 201 PEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEV--MKAINDG------------ 266 (333)
T ss_dssp ----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH--HHHHHTT------------
T ss_pred cccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHH--HHHHHCC------------
Confidence 211 1222345778999999988899999999999999999999 9999975332211 1111000
Q ss_pred ccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhhhhc
Q 039290 992 NLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETLSAY 1046 (1049)
Q Consensus 992 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~~~~ 1046 (1049)
.+...+..++..+.+++.+||+.||++||++.|++++|+++.+.....
T Consensus 267 -------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~~ 314 (333)
T 1mqb_A 267 -------FRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDSL 314 (333)
T ss_dssp -------CCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGGGG
T ss_pred -------CcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcchhh
Confidence 001112235667899999999999999999999999999998876543
No 152
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=1.3e-38 Score=355.51 Aligned_cols=269 Identities=23% Similarity=0.373 Sum_probs=216.7
Q ss_pred cHHHHHHHhcCCCCCceecCCCcEEEEEEEe------CCCcEEEEEEeecccC-CCHHHHHHHHHHHhhc-CCCceeeEE
Q 039290 752 SYQDLLRATDGFSENKLLGMGSFGSVYKGVL------PDGMEIAAKVFHMEFD-GSLESFHAECKVMGSI-RHRNLVKII 823 (1049)
Q Consensus 752 ~~~~~~~~~~~~~~~~~lg~G~fg~Vy~a~~------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~hpniv~l~ 823 (1049)
...++....++|++.+.||+|+||+||+|++ .+++.||+|+++.... ...+.+.+|++++.++ +||||++++
T Consensus 18 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 97 (316)
T 2xir_A 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 97 (316)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEE
Confidence 3344445567899999999999999999983 3568899999975432 2345788999999999 799999999
Q ss_pred eeeecCC-eeEEEEeccCCCChhhhhhcCCC---------------ccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCC
Q 039290 824 SSCSNND-FKALVLEYMSNGSLEKCLYSDNY---------------FLDILQRLKIMIDVASALEYLHFGYSTPIVHCDI 887 (1049)
Q Consensus 824 ~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~---------------~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dl 887 (1049)
+++.+.+ ..++||||+++|+|.+++..... .+++.+++.++.|+++|++||| +.||+||||
T Consensus 98 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~di 174 (316)
T 2xir_A 98 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDL 174 (316)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH---HTTCCCSCC
T ss_pred EEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH---hCCcccccC
Confidence 9987654 58999999999999999976543 2789999999999999999999 999999999
Q ss_pred CCCCeeecCCCceEEecccCceecCCCcc-ccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCCcc
Q 039290 888 KPSNVLLNESMVGHLSDFGIAKILGKEES-MRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFT-KKKPTDEI 965 (1049)
Q Consensus 888 kp~NIl~~~~~~~kl~DfGla~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~ 965 (1049)
||+||+++.++.+||+|||+++....... .......+|+.|+|||++.+..++.++||||+||++|||++ |..||...
T Consensus 175 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~ 254 (316)
T 2xir_A 175 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 254 (316)
T ss_dssp SGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred ccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCccc
Confidence 99999999999999999999987644332 22334567889999999988899999999999999999998 99999764
Q ss_pred ccccchHHHhhhhccccCCcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhh
Q 039290 966 FAGEMSLKRWVGDSLLSCSITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETL 1043 (1049)
Q Consensus 966 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~ 1043 (1049)
...+.......... ....+..++.++.+++.+||+.||++|||++|++++|+++.++.
T Consensus 255 ~~~~~~~~~~~~~~--------------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 312 (316)
T 2xir_A 255 KIDEEFCRRLKEGT--------------------RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 312 (316)
T ss_dssp CCSHHHHHHHHHTC--------------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHhccCc--------------------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 33322221111100 00111224567899999999999999999999999999998764
No 153
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=2.3e-38 Score=354.18 Aligned_cols=249 Identities=22% Similarity=0.263 Sum_probs=183.1
Q ss_pred CceecCCCcEEEEEEEeC-CCcEEEEEEeecccCCCHHHHHHHHHHHhhcC-CCceeeEEeeeecCCeeEEEEeccCCCC
Q 039290 766 NKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFDGSLESFHAECKVMGSIR-HRNLVKIISSCSNNDFKALVLEYMSNGS 843 (1049)
Q Consensus 766 ~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-hpniv~l~~~~~~~~~~~lv~e~~~~g~ 843 (1049)
.+.||+|+||+||+|+.. +++.||||++... ....+.+|+.+++.+. ||||+++++++.+.+..++||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 478999999999999964 7899999999643 3467889999999997 9999999999999999999999999999
Q ss_pred hhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCC---ceEEecccCceecCCCcccccc
Q 039290 844 LEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESM---VGHLSDFGIAKILGKEESMRQT 920 (1049)
Q Consensus 844 L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~---~~kl~DfGla~~~~~~~~~~~~ 920 (1049)
|.+++...+ .+++.+++.++.|+++|++||| ++||+||||||+||+++.++ .+||+|||+++....... ...
T Consensus 93 L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~-~~~ 167 (325)
T 3kn6_A 93 LFERIKKKK-HFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ-PLK 167 (325)
T ss_dssp HHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-------
T ss_pred HHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC-ccc
Confidence 999998764 5899999999999999999999 99999999999999998665 899999999987654332 233
Q ss_pred ccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccc--hHHHhhhhccccCCcchhcccccccccc
Q 039290 921 KTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEM--SLKRWVGDSLLSCSITEVADANLLNCEE 998 (1049)
Q Consensus 921 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 998 (1049)
...+|+.|+|||++.+..++.++||||+||++|||++|..||........ ..... ..........
T Consensus 168 ~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~-------------~~~i~~~~~~ 234 (325)
T 3kn6_A 168 TPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEI-------------MKKIKKGDFS 234 (325)
T ss_dssp ----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHH-------------HHHHTTTCCC
T ss_pred ccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHH-------------HHHHHcCCCC
Confidence 45689999999999999999999999999999999999999976332110 00010 0000000111
Q ss_pred cCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 999 NDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 999 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
........++.++.+++.+||+.||++|||++|++++
T Consensus 235 ~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 235 FEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp CCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred CCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 1112224467789999999999999999999998865
No 154
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=5.5e-38 Score=347.01 Aligned_cols=265 Identities=20% Similarity=0.255 Sum_probs=209.5
Q ss_pred HhcCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCceeeEEeee-ecCCeeEEEE
Q 039290 759 ATDGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRNLVKIISSC-SNNDFKALVL 836 (1049)
Q Consensus 759 ~~~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~-~~~~~~~lv~ 836 (1049)
..++|++.+.||+|+||+||+|+. .+++.||+|++..... .+.+.+|+++++.++|++++..++++ .+.+..++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence 346899999999999999999995 5788999998765432 24688999999999988777666655 6678889999
Q ss_pred eccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeee---cCCCceEEecccCceecCC
Q 039290 837 EYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLL---NESMVGHLSDFGIAKILGK 913 (1049)
Q Consensus 837 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~---~~~~~~kl~DfGla~~~~~ 913 (1049)
||+ +++|.+++......+++.+++.++.|++.|++||| ++||+||||||+||++ +.++.+||+|||+++....
T Consensus 85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~ 160 (296)
T 4hgt_A 85 ELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp ECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred Ecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccC
Confidence 999 89999999876667999999999999999999999 9999999999999999 7889999999999987654
Q ss_pred Ccc------ccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccc--hHHHhhhhccccCCc
Q 039290 914 EES------MRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEM--SLKRWVGDSLLSCSI 985 (1049)
Q Consensus 914 ~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~--~~~~~~~~~~~~~~~ 985 (1049)
... .......||+.|+|||++.+..++.++||||+||++|||++|+.||........ ..........
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~----- 235 (296)
T 4hgt_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKM----- 235 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHH-----
T ss_pred cccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccc-----
Confidence 332 122345789999999999999999999999999999999999999976433221 1111100000
Q ss_pred chhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhhhh
Q 039290 986 TEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETLSA 1045 (1049)
Q Consensus 986 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~~~ 1045 (1049)
..........++.++.+++.+||+.||++|||++++++.|+++.++...
T Consensus 236 -----------~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~ 284 (296)
T 4hgt_A 236 -----------STPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF 284 (296)
T ss_dssp -----------HSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTC
T ss_pred -----------cchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCC
Confidence 0000001123467899999999999999999999999999999988764
No 155
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1.6e-38 Score=354.97 Aligned_cols=268 Identities=21% Similarity=0.271 Sum_probs=200.9
Q ss_pred cCCCCC-ceecCCCcEEEEEEEe-CCCcEEEEEEeecccCCCHHHHHHHHHHHhhc-CCCceeeEEeeeecCCeeEEEEe
Q 039290 761 DGFSEN-KLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEFDGSLESFHAECKVMGSI-RHRNLVKIISSCSNNDFKALVLE 837 (1049)
Q Consensus 761 ~~~~~~-~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e 837 (1049)
++|++. +.||+|+||.||+|+. .+++.||||++........+.+.+|++++.++ +||||+++++++.+.+..++|||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 91 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE 91 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence 467774 7899999999999995 47899999999876666678899999999985 79999999999999999999999
Q ss_pred ccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCc---eEEecccCceecCCC
Q 039290 838 YMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMV---GHLSDFGIAKILGKE 914 (1049)
Q Consensus 838 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~---~kl~DfGla~~~~~~ 914 (1049)
|+++|+|.+++.... .+++.+++.++.|+++||+||| +++|+||||||+||+++.++. +||+|||++......
T Consensus 92 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 167 (316)
T 2ac3_A 92 KMRGGSILSHIHKRR-HFNELEASVVVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLN 167 (316)
T ss_dssp CCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-----
T ss_pred cCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccC
Confidence 999999999987654 4899999999999999999999 999999999999999987765 999999999765322
Q ss_pred cc------ccccccccccCcccccccCC-----CCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccC
Q 039290 915 ES------MRQTKTLGTIGYMAPEYGRE-----GKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSC 983 (1049)
Q Consensus 915 ~~------~~~~~~~~~~~y~aPE~~~~-----~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 983 (1049)
.. .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+..+.. ......
T Consensus 168 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~---~~~~~~ 244 (316)
T 2ac3_A 168 GDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDR---GEACPA 244 (316)
T ss_dssp --------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC-------CCHH
T ss_pred CccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccc---cccchh
Confidence 11 11223458999999999865 56889999999999999999999999764333211100 000000
Q ss_pred CcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 984 SITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 984 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
....+...................+.++.+++.+||+.||++|||++|+++|
T Consensus 245 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 245 CQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 0000000000000000001112356789999999999999999999999986
No 156
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=3.4e-37 Score=363.16 Aligned_cols=346 Identities=28% Similarity=0.439 Sum_probs=197.2
Q ss_pred cccccceEEeccccccccCccccccccceEEEeeccccCCCccccccccccccceEEeccCccCCCCCCcccCCCCCccE
Q 039290 245 NLTSVRNLFLGNNSLIGEIPNEIGNLRNLEVLGVQSSNLAGLIPASIFNISTLKELAVTDNDLLGSLPSSIDLGLPNLER 324 (1049)
Q Consensus 245 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~ 324 (1049)
.+++++.|++++|.+. .+| .+..+++|++|+|++|++.+..| +.++++|++|++++|++.+..+ ...+++|++
T Consensus 44 ~l~~l~~L~l~~~~i~-~l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~---~~~l~~L~~ 116 (466)
T 1o6v_A 44 DLDQVTTLQADRLGIK-SID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP---LANLTNLTG 116 (466)
T ss_dssp HHHTCCEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG---GTTCTTCCE
T ss_pred HhccccEEecCCCCCc-cCc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh---hcCCCCCCE
Confidence 3556666677666665 344 36666677777777666666544 6666666677776666664332 345677777
Q ss_pred EEcCCCCCCCCCCccccCCCCCceeecccCccccCcccccccccccceeecccccccCCCCCcccccccccCCCCcEEEc
Q 039290 325 LFLGENNFSGTIPSSLTNISELSVLDFGFNSFSGLIPTTFGNLRSLKLLSLAGNVLTSPTPDLSFLSSLTSCRNLEIIYL 404 (1049)
Q Consensus 325 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~l~~l~~L~~L~L 404 (1049)
|++++|++++..+ +.++++|++|++++|.+.+. + .++.+++|++|+++ |.+... ..+..+++|+.|++
T Consensus 117 L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~l~-~~~~~~-------~~~~~l~~L~~L~l 184 (466)
T 1o6v_A 117 LTLFNNQITDIDP--LKNLTNLNRLELSSNTISDI-S-ALSGLTSLQQLSFG-NQVTDL-------KPLANLTTLERLDI 184 (466)
T ss_dssp EECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCC-G-GGTTCTTCSEEEEE-ESCCCC-------GGGTTCTTCCEEEC
T ss_pred EECCCCCCCCChH--HcCCCCCCEEECCCCccCCC-h-hhccCCcccEeecC-CcccCc-------hhhccCCCCCEEEC
Confidence 7777777764432 67777777777777777753 3 36777777777775 333332 22566667777777
Q ss_pred cCCccccCCCCccccccccccEEEccCCccccCCCCCCCCCCCccEEEccCCcccccCCccccCcCCCcceEeeccccCC
Q 039290 405 SENPINGILPSSIGNFSISMKSLSMESCNISGGIPKELGNINNLTVIRLGNNELTGTIPVTLGRLQKLQGLYLQNNKLEG 484 (1049)
Q Consensus 405 s~N~i~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 484 (1049)
++|.+++.. .+..+++|++|++++|.+++..| ++.+++|++|++++|++++
T Consensus 185 ~~n~l~~~~---------------------------~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~ 235 (466)
T 1o6v_A 185 SSNKVSDIS---------------------------VLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD 235 (466)
T ss_dssp CSSCCCCCG---------------------------GGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC
T ss_pred cCCcCCCCh---------------------------hhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCccc
Confidence 777665321 13334444444444444443322 3444445555555555442
Q ss_pred CCCcccccccccceEEeeCcccCCcCchhccCcccCCceeecCcccccccCcccccccccccccccCCccCCCCccCcCC
Q 039290 485 SIPEDLCHLYRLANLYLGDNKLSGRLPACLGNLTSLRDLSLGSNALTSIIPSTLWNLKDILRFNLSSNSLNGSLLPDIGN 564 (1049)
Q Consensus 485 ~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 564 (1049)
. ..+..+++|+.|++++|.+++..| +..+++|++|++++|++++..+ +..+++|+.|++++|++++..+ +..
T Consensus 236 ~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~ 307 (466)
T 1o6v_A 236 I--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISN 307 (466)
T ss_dssp C--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGG
T ss_pred c--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcC
Confidence 1 234445555555555555543322 4455555555555555554333 4455555555555555554322 455
Q ss_pred CcceeEeecccccccccccccccCCCcccEEEeecccccCCccccccCccCCcEEeccCccccCCcccccccccccceee
Q 039290 565 LKVVIEMDLSLNALSGVIPVTIGGLQGLQLLSLRYNRLQGPIPESFGGLKSLNFVDMSNNNLSGTIPKSMEALSYLKHLN 644 (1049)
Q Consensus 565 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~ 644 (1049)
+++|++|++++|++++..| +..+++|+.|++++|++++. ..+.++++|++|++++|++++..| +..+++|+.|+
T Consensus 308 l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 381 (466)
T 1o6v_A 308 LKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLG 381 (466)
T ss_dssp CTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEE
T ss_pred CCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEe
Confidence 5556666666666655444 55566666666666666643 345666666666666666665554 55666666666
Q ss_pred ccCCcccc
Q 039290 645 LSFNQLEG 652 (1049)
Q Consensus 645 l~~N~l~~ 652 (1049)
+++|++++
T Consensus 382 l~~n~~~~ 389 (466)
T 1o6v_A 382 LNDQAWTN 389 (466)
T ss_dssp CCCEEEEC
T ss_pred ccCCcccC
Confidence 66666665
No 157
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=1.9e-37 Score=365.37 Aligned_cols=345 Identities=26% Similarity=0.403 Sum_probs=176.1
Q ss_pred CCccceEEeeccccCCCCCCCcccccccceecccccccccccCCCCccccccceEEeccccccccCccccccccceEEEe
Q 039290 198 LPVLEGLFISYNQLTGPIPTNLWKCRELHVVSLAFNKFQGGIPRDIGNLTSVRNLFLGNNSLIGEIPNEIGNLRNLEVLG 277 (1049)
Q Consensus 198 l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 277 (1049)
++.++.|++++|.+.. +|. +..+++|++|+|++|.+++..| ++++++|++|+|++|++++..| ++++++|++|+
T Consensus 45 l~~l~~L~l~~~~i~~-l~~-~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 118 (466)
T 1o6v_A 45 LDQVTTLQADRLGIKS-IDG-VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLT 118 (466)
T ss_dssp HHTCCEEECCSSCCCC-CTT-GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred hccccEEecCCCCCcc-Ccc-hhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEE
Confidence 3457778888877763 553 6667777777777777765433 6777777777777777764433 66777777777
Q ss_pred eccccCCCccccccccccccceEEeccCccCCCCCCcccCCCCCccEEEcCCCCCCCCCCccccCCCCCceeecccCccc
Q 039290 278 VQSSNLAGLIPASIFNISTLKELAVTDNDLLGSLPSSIDLGLPNLERLFLGENNFSGTIPSSLTNISELSVLDFGFNSFS 357 (1049)
Q Consensus 278 L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 357 (1049)
+++|++.+..+ +.++++|++|++++|.+.+ ++. ...+++|++|+++ |.+.+..+ +.++++|++|++++|.+.
T Consensus 119 L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~~--~~~l~~L~~L~l~-~~~~~~~~--~~~l~~L~~L~l~~n~l~ 190 (466)
T 1o6v_A 119 LFNNQITDIDP--LKNLTNLNRLELSSNTISD-ISA--LSGLTSLQQLSFG-NQVTDLKP--LANLTTLERLDISSNKVS 190 (466)
T ss_dssp CCSSCCCCCGG--GTTCTTCSEEEEEEEEECC-CGG--GTTCTTCSEEEEE-ESCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred CCCCCCCCChH--HcCCCCCCEEECCCCccCC-Chh--hccCCcccEeecC-CcccCchh--hccCCCCCEEECcCCcCC
Confidence 77776665533 5566666666666666552 221 2245555555553 33332211 444555555555555544
Q ss_pred cCcccccccccccceeecccccccCCCCCcccccccccCCCCcEEEccCCccccCCCCccccccccccEEEccCCccccC
Q 039290 358 GLIPTTFGNLRSLKLLSLAGNVLTSPTPDLSFLSSLTSCRNLEIIYLSENPINGILPSSIGNFSISMKSLSMESCNISGG 437 (1049)
Q Consensus 358 ~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~~~~~L~~L~L~~n~i~~~ 437 (1049)
+. ..+..+++|++|++++|.++...+ +..+++|+.|++++|.++ +.
T Consensus 191 ~~--~~l~~l~~L~~L~l~~n~l~~~~~-------~~~l~~L~~L~l~~n~l~-------------------------~~ 236 (466)
T 1o6v_A 191 DI--SVLAKLTNLESLIATNNQISDITP-------LGILTNLDELSLNGNQLK-------------------------DI 236 (466)
T ss_dssp CC--GGGGGCTTCSEEECCSSCCCCCGG-------GGGCTTCCEEECCSSCCC-------------------------CC
T ss_pred CC--hhhccCCCCCEEEecCCccccccc-------ccccCCCCEEECCCCCcc-------------------------cc
Confidence 32 124444444444444444433221 222333333333333332 21
Q ss_pred CCCCCCCCCCccEEEccCCcccccCCccccCcCCCcceEeeccccCCCCCcccccccccceEEeeCcccCCcCchhccCc
Q 039290 438 IPKELGNINNLTVIRLGNNELTGTIPVTLGRLQKLQGLYLQNNKLEGSIPEDLCHLYRLANLYLGDNKLSGRLPACLGNL 517 (1049)
Q Consensus 438 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 517 (1049)
+.+..+++|+.|++++|.+++..| +..+++|++|++++|++++..+ +..+++|+.|++++|++++..+ ++.+
T Consensus 237 --~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l 308 (466)
T 1o6v_A 237 --GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNL 308 (466)
T ss_dssp --GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGC
T ss_pred --hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCC
Confidence 123444555555555555553322 4445555555555555543222 4444444455554444443222 4444
Q ss_pred ccCCceeecCcccccccCcccccccccccccccCCccCCCCccCcCCCcceeEeecccccccccccccccCCCcccEEEe
Q 039290 518 TSLRDLSLGSNALTSIIPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALSGVIPVTIGGLQGLQLLSL 597 (1049)
Q Consensus 518 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 597 (1049)
++|+.|++++|++++..| +..+++|++|++++|++++. ..+..+++|+.|++
T Consensus 309 ~~L~~L~L~~n~l~~~~~--------------------------~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l 360 (466)
T 1o6v_A 309 KNLTYLTLYFNNISDISP--------------------------VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSA 360 (466)
T ss_dssp TTCSEEECCSSCCSCCGG--------------------------GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEEC
T ss_pred CCCCEEECcCCcCCCchh--------------------------hccCccCCEeECCCCccCCc--hhhccCCCCCEEeC
Confidence 444444444444444332 34444444455555544433 24555555555555
Q ss_pred ecccccCCccccccCccCCcEEeccCccccC
Q 039290 598 RYNRLQGPIPESFGGLKSLNFVDMSNNNLSG 628 (1049)
Q Consensus 598 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 628 (1049)
++|++++..| +..+++|+.|++++|++++
T Consensus 361 ~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 361 GHNQISDLTP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp CSSCCCBCGG--GTTCTTCCEEECCCEEEEC
T ss_pred CCCccCccch--hhcCCCCCEEeccCCcccC
Confidence 5555555444 5555555555555555553
No 158
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=2.3e-38 Score=355.23 Aligned_cols=262 Identities=24% Similarity=0.415 Sum_probs=211.0
Q ss_pred cCCCCCceecCCCcEEEEEEEeC-CCcEE--EEEEeeccc-CCCHHHHHHHHHHHhhc-CCCceeeEEeeeecCCeeEEE
Q 039290 761 DGFSENKLLGMGSFGSVYKGVLP-DGMEI--AAKVFHMEF-DGSLESFHAECKVMGSI-RHRNLVKIISSCSNNDFKALV 835 (1049)
Q Consensus 761 ~~~~~~~~lg~G~fg~Vy~a~~~-~~~~v--avK~~~~~~-~~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~~lv 835 (1049)
++|++.+.||+|+||.||+|+.. ++..+ |+|.++... ....+.+.+|+++++++ +||||+++++++.+.+..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 46888899999999999999954 56644 899887532 33456789999999999 899999999999999999999
Q ss_pred EeccCCCChhhhhhcCC---------------CccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCce
Q 039290 836 LEYMSNGSLEKCLYSDN---------------YFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVG 900 (1049)
Q Consensus 836 ~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~ 900 (1049)
|||+++|+|.+++...+ ..+++.+++.++.|+++||+||| ++||+||||||+||+++.++.+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVA 181 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCccceEEEcCCCeE
Confidence 99999999999997654 36899999999999999999999 9999999999999999999999
Q ss_pred EEecccCceecCCCccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCCccccccchHHHhhhhc
Q 039290 901 HLSDFGIAKILGKEESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFT-KKKPTDEIFAGEMSLKRWVGDS 979 (1049)
Q Consensus 901 kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~ 979 (1049)
||+|||+++...... ......+++.|+|||++.+..++.++||||+||++|||++ |..||......+. ......
T Consensus 182 kL~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~--~~~~~~- 256 (327)
T 1fvr_A 182 KIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL--YEKLPQ- 256 (327)
T ss_dssp EECCTTCEESSCEEC--CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH--HHHGGG-
T ss_pred EEcccCcCccccccc--cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHH--HHHhhc-
Confidence 999999997543211 2233456789999999988889999999999999999998 9999976322211 110000
Q ss_pred cccCCcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhhhhccC
Q 039290 980 LLSCSITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETLSAYID 1048 (1049)
Q Consensus 980 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~~~~~~ 1048 (1049)
. .+...+..++.++.+++.+||+.||++|||++|++++|+++.++...+++
T Consensus 257 ---~---------------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~~~ 307 (327)
T 1fvr_A 257 ---G---------------YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTYVN 307 (327)
T ss_dssp ---T---------------CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSSCSBC
T ss_pred ---C---------------CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhcCccc
Confidence 0 00111123456789999999999999999999999999999998877765
No 159
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.7e-38 Score=359.43 Aligned_cols=259 Identities=22% Similarity=0.269 Sum_probs=204.2
Q ss_pred HHHHhcCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeeccc-----CCCHHHHHHHHHHHhhcCCCceeeEEeeeecC
Q 039290 756 LLRATDGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEF-----DGSLESFHAECKVMGSIRHRNLVKIISSCSNN 829 (1049)
Q Consensus 756 ~~~~~~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~ 829 (1049)
+....++|++.+.||+|+||+||+|+. .+++.||+|++.... ....+.+.+|++++++++||||+++++++.+.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 344566799999999999999999996 478899999986542 34467899999999999999999999999999
Q ss_pred CeeEEEEeccCCCChhhhhhcC---------------------------------------CCccCHHHHHHHHHHHHHH
Q 039290 830 DFKALVLEYMSNGSLEKCLYSD---------------------------------------NYFLDILQRLKIMIDVASA 870 (1049)
Q Consensus 830 ~~~~lv~e~~~~g~L~~~l~~~---------------------------------------~~~~~~~~~~~i~~~i~~~ 870 (1049)
+..++||||+++|+|.+++... ...+++..++.++.|+++|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 9999999999999999988521 1234677888999999999
Q ss_pred HHHhHccCCCCeEEcCCCCCCeeecCCC--ceEEecccCceecCCCc---cccccccccccCcccccccCC--CCcCccc
Q 039290 871 LEYLHFGYSTPIVHCDIKPSNVLLNESM--VGHLSDFGIAKILGKEE---SMRQTKTLGTIGYMAPEYGRE--GKVSRKC 943 (1049)
Q Consensus 871 l~~LH~~~~~~ivH~Dlkp~NIl~~~~~--~~kl~DfGla~~~~~~~---~~~~~~~~~~~~y~aPE~~~~--~~~~~~~ 943 (1049)
|+||| +.+|+||||||+||+++.++ .+||+|||++..+.... ........||+.|+|||++.+ ..++.++
T Consensus 181 l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 257 (345)
T 3hko_A 181 LHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257 (345)
T ss_dssp HHHHH---HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHH
T ss_pred HHHHH---HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHH
Confidence 99999 99999999999999998766 89999999998764322 122345678999999999865 6788999
Q ss_pred chHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhcccccccccccCchhhHHHHHHHHHHHhhccccCC
Q 039290 944 DVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLP 1023 (1049)
Q Consensus 944 DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP 1023 (1049)
||||+||++|||++|+.||......+.......... ....+.....+.++.+++.+||+.||
T Consensus 258 DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~li~~~l~~~p 319 (345)
T 3hko_A 258 DAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKL------------------CFENPNYNVLSPLARDLLSNLLNRNV 319 (345)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC------------------CTTSGGGGGSCHHHHHHHHHHSCSCT
T ss_pred HHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhccc------------------ccCCcccccCCHHHHHHHHHHcCCCh
Confidence 999999999999999999976433322211111000 00011112345678999999999999
Q ss_pred CCCCCHHHHHHH
Q 039290 1024 EKRISMKDVANR 1035 (1049)
Q Consensus 1024 ~~Rpt~~ell~~ 1035 (1049)
.+|||+.|++++
T Consensus 320 ~~Rps~~~~l~h 331 (345)
T 3hko_A 320 DERFDAMRALQH 331 (345)
T ss_dssp TTSCCHHHHHHS
T ss_pred hHCCCHHHHhcC
Confidence 999999999986
No 160
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.9e-38 Score=346.62 Aligned_cols=248 Identities=22% Similarity=0.330 Sum_probs=184.0
Q ss_pred hcCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeeccc---CCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEE
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEF---DGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALV 835 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 835 (1049)
.++|++.+.||+|+||.||+|+. .+++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (275)
T 2eue_A 12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEE
T ss_pred ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEE
Confidence 35799999999999999999995 578999999997543 23456889999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCc
Q 039290 836 LEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEE 915 (1049)
Q Consensus 836 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~ 915 (1049)
|||+ ++++.+.+.... .+++.+++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||++.......
T Consensus 92 ~e~~-~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 166 (275)
T 2eue_A 92 IEYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp EECC-CEEHHHHHHTSS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCSSCC-------
T ss_pred ehhc-CCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCeeccCChHhEEECCCCCEEEeecccceeccCcc
Confidence 9999 668888776654 4899999999999999999999 9999999999999999999999999999998664332
Q ss_pred cccccccccccCcccccccCCCCc-CcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhcccccc
Q 039290 916 SMRQTKTLGTIGYMAPEYGREGKV-SRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLL 994 (1049)
Q Consensus 916 ~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1049)
. .....+|+.|+|||++.+..+ +.++||||+||++|||++|+.||..............
T Consensus 167 ~--~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~------------------ 226 (275)
T 2eue_A 167 F--LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISN------------------ 226 (275)
T ss_dssp ----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH------------------
T ss_pred c--ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh------------------
Confidence 2 234568999999999887665 7899999999999999999999976322211111000
Q ss_pred cccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 039290 995 NCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRL 1036 (1049)
Q Consensus 995 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L 1036 (1049)
.....+..++..+.+++.+|++.||++|||++|++++-
T Consensus 227 ----~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h~ 264 (275)
T 2eue_A 227 ----GVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDD 264 (275)
T ss_dssp ----TCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCH
T ss_pred ----CCCCCCccCCHHHHHHHHHHhhcCHhHCCCHHHHhhCC
Confidence 00111122456789999999999999999999999873
No 161
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=2.2e-38 Score=350.61 Aligned_cols=260 Identities=25% Similarity=0.419 Sum_probs=206.9
Q ss_pred cCCCCCceecCCCcEEEEEEEeCC----CcEEEEEEeecccC-CCHHHHHHHHHHHhhcCCCceeeEEeee-ecCCeeEE
Q 039290 761 DGFSENKLLGMGSFGSVYKGVLPD----GMEIAAKVFHMEFD-GSLESFHAECKVMGSIRHRNLVKIISSC-SNNDFKAL 834 (1049)
Q Consensus 761 ~~~~~~~~lg~G~fg~Vy~a~~~~----~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~hpniv~l~~~~-~~~~~~~l 834 (1049)
.+|+..+.||+|+||+||+|+..+ ...||+|.+..... ...+.+.+|++++++++||||+++++++ ..++..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 458888999999999999998542 23588998865332 2346788999999999999999999985 45668899
Q ss_pred EEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCC
Q 039290 835 VLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKE 914 (1049)
Q Consensus 835 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~ 914 (1049)
||||+++|+|.+++......+++.+++.++.|+++|++||| ++||+||||||+||+++.++.+||+|||+++.....
T Consensus 105 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 181 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 181 (298)
T ss_dssp EEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCG
T ss_pred EEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEECCCCCEEECccccccccccc
Confidence 99999999999999887777899999999999999999999 999999999999999999999999999999876443
Q ss_pred cc---ccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCCccccccchHHHhhhhccccCCcchhcc
Q 039290 915 ES---MRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFT-KKKPTDEIFAGEMSLKRWVGDSLLSCSITEVAD 990 (1049)
Q Consensus 915 ~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1049)
.. .......+|+.|+|||.+.+..++.++||||+|+++|||++ |.+||......+..... ....
T Consensus 182 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~-~~~~----------- 249 (298)
T 3f66_A 182 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-LQGR----------- 249 (298)
T ss_dssp GGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHH-HTTC-----------
T ss_pred chhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHH-hcCC-----------
Confidence 31 12233457788999999988899999999999999999999 55565543222221111 1000
Q ss_pred cccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhhh
Q 039290 991 ANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETLS 1044 (1049)
Q Consensus 991 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~~ 1044 (1049)
+...+..++..+.+++.+||+.||++|||++|+++.|+++.+++.
T Consensus 250 ---------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~ 294 (298)
T 3f66_A 250 ---------RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 294 (298)
T ss_dssp ---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSC
T ss_pred ---------CCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence 001112245678999999999999999999999999999988653
No 162
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=5.3e-38 Score=349.16 Aligned_cols=269 Identities=23% Similarity=0.251 Sum_probs=203.6
Q ss_pred hcCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeecccC-----CCHHHHHHHHHHHhhcC---CCceeeEEeeeecCC
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEFD-----GSLESFHAECKVMGSIR---HRNLVKIISSCSNND 830 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~---hpniv~l~~~~~~~~ 830 (1049)
.++|++.+.||+|+||+||+|+. .+++.||+|+++.... .....+.+|++++++++ ||||+++++++.+..
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~ 87 (308)
T 3g33_A 8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSR 87 (308)
T ss_dssp --CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECC
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccC
Confidence 56899999999999999999995 5789999999975431 22456778888877764 999999999997754
Q ss_pred -----eeEEEEeccCCCChhhhhhcCCC-ccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEec
Q 039290 831 -----FKALVLEYMSNGSLEKCLYSDNY-FLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSD 904 (1049)
Q Consensus 831 -----~~~lv~e~~~~g~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~D 904 (1049)
..++||||++ ++|.+++..... .+++.+++.++.|+++||+||| +++|+||||||+||+++.++.+||+|
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~D 163 (308)
T 3g33_A 88 TDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLAD 163 (308)
T ss_dssp SSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCTTTEEECTTSCEEECS
T ss_pred CCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEEee
Confidence 5789999997 599999876543 4899999999999999999999 99999999999999999999999999
Q ss_pred ccCceecCCCccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhc--ccc
Q 039290 905 FGIAKILGKEESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDS--LLS 982 (1049)
Q Consensus 905 fGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~--~~~ 982 (1049)
||+++...... ......+|+.|+|||++.+..++.++||||+||++|||++|+.||......+... ...... ...
T Consensus 164 fg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~-~i~~~~~~~~~ 240 (308)
T 3g33_A 164 FGLARIYSYQM--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLG-KIFDLIGLPPE 240 (308)
T ss_dssp CSCTTTSTTCC--CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHH-HHHHHHCCCCT
T ss_pred CccccccCCCc--ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHHHhCCCCh
Confidence 99998664332 2344678999999999988899999999999999999999999997643322211 111100 000
Q ss_pred CCcchhc---ccccccc-cccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 983 CSITEVA---DANLLNC-EENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 983 ~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
..+.... ....... .........+.++++.+++.+|++.||++|||++|+++|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 241 DDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp TTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 0000000 0000000 000011112356788999999999999999999999986
No 163
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=2.3e-38 Score=353.82 Aligned_cols=260 Identities=22% Similarity=0.261 Sum_probs=207.7
Q ss_pred hcCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCceeeEEeeee----cCCeeEE
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRNLVKIISSCS----NNDFKAL 834 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~----~~~~~~l 834 (1049)
.++|++.+.||+|+||.||+|+. .+++.||+|++........+.+.+|+++++.++||||+++++++. ..+..++
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 45799999999999999999996 589999999987655555678899999999999999999999986 3457899
Q ss_pred EEeccCCCChhhhhhc---CCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceec
Q 039290 835 VLEYMSNGSLEKCLYS---DNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKIL 911 (1049)
Q Consensus 835 v~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~ 911 (1049)
||||+++|+|.+++.. ....+++.+++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++...
T Consensus 108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~ 184 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184 (317)
T ss_dssp EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence 9999999999998875 3456899999999999999999999 999999999999999999999999999998865
Q ss_pred CCCccc--------cccccccccCcccccccCCCC---cCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhcc
Q 039290 912 GKEESM--------RQTKTLGTIGYMAPEYGREGK---VSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSL 980 (1049)
Q Consensus 912 ~~~~~~--------~~~~~~~~~~y~aPE~~~~~~---~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 980 (1049)
...... ......|++.|+|||++.+.. ++.++||||+||++|||++|+.||..................
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~ 264 (317)
T 2buj_A 185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQL 264 (317)
T ss_dssp CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC-
T ss_pred ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhccC
Confidence 422111 112345789999999987543 688999999999999999999999753322222111111000
Q ss_pred ccCCcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHH
Q 039290 981 LSCSITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRE 1041 (1049)
Q Consensus 981 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~ 1041 (1049)
..+....++.++.+++.+||+.||.+|||++|++++|+++..
T Consensus 265 -------------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~ 306 (317)
T 2buj_A 265 -------------------SIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP 306 (317)
T ss_dssp --------------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCC
T ss_pred -------------------CCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCC
Confidence 001112345679999999999999999999999999998754
No 164
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=2.6e-38 Score=346.38 Aligned_cols=248 Identities=25% Similarity=0.358 Sum_probs=203.4
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeeccc---CCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEE
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEF---DGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALV 835 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 835 (1049)
.++|++.+.||+|+||.||+|+.. ++..||+|++.... ......+.+|++++++++||||+++++++.+.+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 467899999999999999999864 67799999986532 23456789999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCc
Q 039290 836 LEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEE 915 (1049)
Q Consensus 836 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~ 915 (1049)
|||+++++|.+++.... .+++..++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||++.......
T Consensus 88 ~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~ 163 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 163 (279)
T ss_dssp ECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTCEECCCCGGGEEECTTSCEEECSCCEESCC----
T ss_pred EecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHhEEEcCCCCEEEEeccccccCCccc
Confidence 99999999999987654 4899999999999999999999 9999999999999999999999999999986543322
Q ss_pred cccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhccccccc
Q 039290 916 SMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLLN 995 (1049)
Q Consensus 916 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1049)
.....+++.|+|||.+.+..++.++||||+|+++|+|++|..||......+.. .... .
T Consensus 164 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-~~~~-~----------------- 221 (279)
T 3fdn_A 164 ---RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY-KRIS-R----------------- 221 (279)
T ss_dssp -------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHH-HHHH-H-----------------
T ss_pred ---ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHH-HHHH-h-----------------
Confidence 23456899999999999989999999999999999999999999753222111 1000 0
Q ss_pred ccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 039290 996 CEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRL 1036 (1049)
Q Consensus 996 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L 1036 (1049)
.....+...+..+.+++.+||+.||++|||++|+++|-
T Consensus 222 ---~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~ 259 (279)
T 3fdn_A 222 ---VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP 259 (279)
T ss_dssp ---TCCCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCH
T ss_pred ---CCCCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhCc
Confidence 00111122456789999999999999999999999874
No 165
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.5e-38 Score=351.73 Aligned_cols=261 Identities=21% Similarity=0.279 Sum_probs=202.0
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccCCC---HHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEE
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFDGS---LESFHAECKVMGSIRHRNLVKIISSCSNNDFKALV 835 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 835 (1049)
.++|++.+.||+|+||.||+|+.. +++.||+|++....... .+.+.+|+.++++++||||+++++++.+++..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 568999999999999999999965 78899999997654322 46788999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCc
Q 039290 836 LEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEE 915 (1049)
Q Consensus 836 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~ 915 (1049)
|||+++++|.+++.... .+++.+++.++.|+++|++||| +.||+||||||+||+++.++.+||+|||++.......
T Consensus 113 ~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 188 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQG-PLAPPRAVAIVRQIGSALDAAH---AAGATHRDVKPENILVSADDFAYLVDFGIASATTDEK 188 (309)
T ss_dssp EECCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSCCC--------
T ss_pred EEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCcCCcCCCChHHEEEcCCCCEEEecCccCccccccc
Confidence 99999999999987654 4899999999999999999999 9999999999999999999999999999998765443
Q ss_pred cccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhccccccc
Q 039290 916 SMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLLN 995 (1049)
Q Consensus 916 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1049)
........+++.|+|||++.+..++.++||||+|+++|||++|+.||...... ..........
T Consensus 189 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~--------------- 251 (309)
T 2h34_A 189 LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--VMGAHINQAI--------------- 251 (309)
T ss_dssp --------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--HHHHHHHSCC---------------
T ss_pred cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--HHHHHhccCC---------------
Confidence 33334557899999999999989999999999999999999999999763222 1111110000
Q ss_pred ccccCchhhHHHHHHHHHHHhhccccCCCCCC-CHHHHHHHHHHHHHhh
Q 039290 996 CEENDFSAREQCVSSIFSLAMDCTVDLPEKRI-SMKDVANRLVRIRETL 1043 (1049)
Q Consensus 996 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-t~~ell~~L~~i~~~~ 1043 (1049)
......+..++.++.+++.+||+.||++|| +++++++.|++.....
T Consensus 252 --~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 252 --PRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp --CCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred --CCccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence 000111233556789999999999999999 9999999998776543
No 166
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=1.2e-37 Score=344.31 Aligned_cols=264 Identities=20% Similarity=0.253 Sum_probs=212.4
Q ss_pred hcCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCceeeEEeee-ecCCeeEEEEe
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRNLVKIISSC-SNNDFKALVLE 837 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~-~~~~~~~lv~e 837 (1049)
.++|++.+.||+|+||.||+|+. .+++.||+|++.... ..+++.+|+++++.++|++++..++++ .+.+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 46799999999999999999995 589999999987543 335789999999999988766666554 66778899999
Q ss_pred ccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeec---CCCceEEecccCceecCCC
Q 039290 838 YMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLN---ESMVGHLSDFGIAKILGKE 914 (1049)
Q Consensus 838 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~---~~~~~kl~DfGla~~~~~~ 914 (1049)
|+ +++|.+++......+++.+++.++.|++.|++||| ++||+||||||+||+++ .++.+||+|||++......
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (296)
T 3uzp_A 86 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred ec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccc
Confidence 99 88999999866667999999999999999999999 99999999999999994 8889999999999876543
Q ss_pred ccc------cccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccc--hHHHhhhhccccCCcc
Q 039290 915 ESM------RQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEM--SLKRWVGDSLLSCSIT 986 (1049)
Q Consensus 915 ~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~ 986 (1049)
... ......||+.|+|||++.+..++.++||||+||++|||++|+.||......+. ...........
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~----- 236 (296)
T 3uzp_A 162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMS----- 236 (296)
T ss_dssp TTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHH-----
T ss_pred ccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccC-----
Confidence 321 12345789999999999999999999999999999999999999986432211 11111100000
Q ss_pred hhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhhhh
Q 039290 987 EVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETLSA 1045 (1049)
Q Consensus 987 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~~~ 1045 (1049)
.........++.++.+++.+||+.||++|||++++++.|+++..+...
T Consensus 237 -----------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~ 284 (296)
T 3uzp_A 237 -----------TPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF 284 (296)
T ss_dssp -----------SCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred -----------CchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCC
Confidence 000011123467899999999999999999999999999999887653
No 167
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=3.9e-38 Score=345.92 Aligned_cols=252 Identities=23% Similarity=0.363 Sum_probs=206.2
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccCC--CHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEE
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFDG--SLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVL 836 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 836 (1049)
.++|++.+.||+|+||.||+|... +++.||+|++...... ..+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 467999999999999999999964 6899999999765422 3467889999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCc---eEEecccCceecCC
Q 039290 837 EYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMV---GHLSDFGIAKILGK 913 (1049)
Q Consensus 837 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~---~kl~DfGla~~~~~ 913 (1049)
||+++++|.+.+.... .+++.+++.++.|++.|++||| +.||+||||||+||+++.++. +||+|||++.....
T Consensus 85 e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 85 DLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp CCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred ecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 9999999988887654 4899999999999999999999 999999999999999986554 99999999987654
Q ss_pred CccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhccccc
Q 039290 914 EESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANL 993 (1049)
Q Consensus 914 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1049)
... .....+++.|+|||++.+..++.++||||+|+++|+|++|+.||......+..... .....
T Consensus 161 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~-~~~~~------------- 224 (284)
T 3kk8_A 161 SEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI-KAGAY------------- 224 (284)
T ss_dssp SCB--CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH-HHTCC-------------
T ss_pred Ccc--ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHH-Hhccc-------------
Confidence 332 23456899999999999999999999999999999999999999753222111111 10000
Q ss_pred ccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 994 LNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 994 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
.........++.++.+++.+|++.||++|||++|++++
T Consensus 225 ----~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 225 ----DYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp ----CCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred ----cCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 00001112345678999999999999999999999986
No 168
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=7.3e-39 Score=356.49 Aligned_cols=258 Identities=22% Similarity=0.384 Sum_probs=198.2
Q ss_pred hcCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeecccCCC---HHHHHHHHHHHhhcCCCceeeEEeeeecCCe----
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEFDGS---LESFHAECKVMGSIRHRNLVKIISSCSNNDF---- 831 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~---- 831 (1049)
.++|++.+.||+|+||.||+|+. .+++.||+|+++...... ...+.+|++++++++||||+++++++...+.
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 45799999999999999999995 578999999997654333 3578899999999999999999999876543
Q ss_pred eEEEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceec
Q 039290 832 KALVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKIL 911 (1049)
Q Consensus 832 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~ 911 (1049)
.++||||+++++|.+++...+ .+++.+++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||++...
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~ 166 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAI 166 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEETTSCEEECCCSCC---
T ss_pred cEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEcCCCCEEEeeccCcccc
Confidence 499999999999999987654 4899999999999999999999 999999999999999999999999999999876
Q ss_pred CCCcc--ccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhc
Q 039290 912 GKEES--MRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVA 989 (1049)
Q Consensus 912 ~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 989 (1049)
..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||......+.........
T Consensus 167 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~----------- 235 (311)
T 3ork_A 167 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRED----------- 235 (311)
T ss_dssp ---------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCC-----------
T ss_pred cccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCC-----------
Confidence 54322 12233568999999999998899999999999999999999999997643222211111100
Q ss_pred ccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHH-HHHHH
Q 039290 990 DANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVAN-RLVRI 1039 (1049)
Q Consensus 990 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~-~L~~i 1039 (1049)
..........++.++.+++.+||+.||++||++.++++ .+.++
T Consensus 236 -------~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 236 -------PIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp -------CCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred -------CCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 00000111235677999999999999999997666554 45444
No 169
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=4.4e-39 Score=360.46 Aligned_cols=265 Identities=23% Similarity=0.389 Sum_probs=213.2
Q ss_pred HHHHHhcCCCCCceecCCCcEEEEEEEeC------CCcEEEEEEeecccC-CCHHHHHHHHHHHhhcCCCceeeEEeeee
Q 039290 755 DLLRATDGFSENKLLGMGSFGSVYKGVLP------DGMEIAAKVFHMEFD-GSLESFHAECKVMGSIRHRNLVKIISSCS 827 (1049)
Q Consensus 755 ~~~~~~~~~~~~~~lg~G~fg~Vy~a~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~hpniv~l~~~~~ 827 (1049)
++....++|++.+.||+|+||.||+|++. +++.||+|++..... .....+.+|++++++++||||+++++++.
T Consensus 19 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 98 (322)
T 1p4o_A 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 98 (322)
T ss_dssp TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEEC
T ss_pred hhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEc
Confidence 33445678999999999999999999854 367899999975432 23456889999999999999999999999
Q ss_pred cCCeeEEEEeccCCCChhhhhhcCC---------CccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCC
Q 039290 828 NNDFKALVLEYMSNGSLEKCLYSDN---------YFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESM 898 (1049)
Q Consensus 828 ~~~~~~lv~e~~~~g~L~~~l~~~~---------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~ 898 (1049)
+.+..++||||+++|+|.+++...+ ..+++.+++.++.|++.||+||| ++||+||||||+||+++.++
T Consensus 99 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~NIli~~~~ 175 (322)
T 1p4o_A 99 QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDF 175 (322)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGEEECTTC
T ss_pred cCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCCccCCCccceEEEcCCC
Confidence 9999999999999999999987532 34689999999999999999999 99999999999999999999
Q ss_pred ceEEecccCceecCCCccc-cccccccccCcccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCCccccccchHHHhh
Q 039290 899 VGHLSDFGIAKILGKEESM-RQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFT-KKKPTDEIFAGEMSLKRWV 976 (1049)
Q Consensus 899 ~~kl~DfGla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~ 976 (1049)
.+||+|||++......... ......+++.|+|||++.+..++.++||||+||++|||++ |..||......+. ...+
T Consensus 176 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~--~~~~ 253 (322)
T 1p4o_A 176 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV--LRFV 253 (322)
T ss_dssp CEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHH--HHHH
T ss_pred eEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHH--HHHH
Confidence 9999999999865433221 2233456889999999988889999999999999999999 8899876322211 1111
Q ss_pred hhccccCCcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhh
Q 039290 977 GDSLLSCSITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETL 1043 (1049)
Q Consensus 977 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~ 1043 (1049)
.. ... ...+..++..+.+++.+||+.||++|||+.|++++|+++.+..
T Consensus 254 ~~------------~~~-------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~~ 301 (322)
T 1p4o_A 254 ME------------GGL-------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 301 (322)
T ss_dssp HT------------TCC-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTT
T ss_pred Hc------------CCc-------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhccC
Confidence 00 000 0111235567899999999999999999999999998875543
No 170
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6e-38 Score=347.08 Aligned_cols=260 Identities=23% Similarity=0.364 Sum_probs=208.1
Q ss_pred CCCCCceecCCCcEEEEEEEeC-CC---cEEEEEEeecccC-CCHHHHHHHHHHHhhcCCCceeeEEeeeecCCee-EEE
Q 039290 762 GFSENKLLGMGSFGSVYKGVLP-DG---MEIAAKVFHMEFD-GSLESFHAECKVMGSIRHRNLVKIISSCSNNDFK-ALV 835 (1049)
Q Consensus 762 ~~~~~~~lg~G~fg~Vy~a~~~-~~---~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~-~lv 835 (1049)
.|...+.||+|+||+||+|++. ++ ..||+|++..... ...+.+.+|++++++++||||+++++++.+.+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 4556689999999999999843 22 3799999865332 2356788999999999999999999999876655 999
Q ss_pred EeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCc
Q 039290 836 LEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEE 915 (1049)
Q Consensus 836 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~ 915 (1049)
|||+.+|+|.+++......+++.+++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||+++......
T Consensus 102 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 178 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLARDILDRE 178 (298)
T ss_dssp ECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred EecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence 9999999999999887777899999999999999999999 9999999999999999999999999999998654332
Q ss_pred c---ccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhcccc
Q 039290 916 S---MRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADAN 992 (1049)
Q Consensus 916 ~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 992 (1049)
. .......+++.|+|||.+.+..++.++||||+||++|||++|..|+........ .........
T Consensus 179 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~-~~~~~~~~~------------ 245 (298)
T 3pls_A 179 YYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFD-LTHFLAQGR------------ 245 (298)
T ss_dssp GGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGG-HHHHHHTTC------------
T ss_pred ccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHH-HHHHhhcCC------------
Confidence 1 122334578899999999999999999999999999999996655433222211 111111000
Q ss_pred cccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhhh
Q 039290 993 LLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETLS 1044 (1049)
Q Consensus 993 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~~ 1044 (1049)
....+..++..+.+++.+||+.||++|||++|+++.|+++.+++.
T Consensus 246 -------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~ 290 (298)
T 3pls_A 246 -------RLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALL 290 (298)
T ss_dssp -------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCC
T ss_pred -------CCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHh
Confidence 011112345678999999999999999999999999999998764
No 171
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=5.6e-38 Score=343.15 Aligned_cols=253 Identities=25% Similarity=0.372 Sum_probs=209.0
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeeccc-CCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEEe
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEF-DGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVLE 837 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 837 (1049)
.++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 457889999999999999999965 78999999997554 3345788999999999999999999999999999999999
Q ss_pred ccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCcc-
Q 039290 838 YMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEES- 916 (1049)
Q Consensus 838 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~~- 916 (1049)
|+++++|.+++.... .+++.+++.++.|+++|++||| +.||+||||||+||+++.++.+||+|||.+........
T Consensus 86 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 161 (276)
T 2yex_A 86 YCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (276)
T ss_dssp CCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred ecCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcch
Confidence 999999999887543 5899999999999999999999 99999999999999999999999999999986643221
Q ss_pred ccccccccccCcccccccCCCCc-CcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhccccccc
Q 039290 917 MRQTKTLGTIGYMAPEYGREGKV-SRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLLN 995 (1049)
Q Consensus 917 ~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1049)
.......+++.|+|||++.+..+ +.++||||+|+++|||++|+.||............|......
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-------------- 227 (276)
T 2yex_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-------------- 227 (276)
T ss_dssp CCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTT--------------
T ss_pred hcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccc--------------
Confidence 12234568999999999987665 789999999999999999999998644433333333321100
Q ss_pred ccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 996 CEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 996 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
.......+..+.+++.+||+.||++|||++|++++
T Consensus 228 -----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 228 -----LNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp -----STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -----cCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 00112345678899999999999999999999875
No 172
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.2e-38 Score=357.69 Aligned_cols=252 Identities=23% Similarity=0.343 Sum_probs=198.0
Q ss_pred hcCCCCCceecCCCcEEEEEEEeCCCcEEEEEEeecccCC--CHHHHHHHHHHHhhcCC--CceeeEEeeeecCCeeEEE
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLPDGMEIAAKVFHMEFDG--SLESFHAECKVMGSIRH--RNLVKIISSCSNNDFKALV 835 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h--pniv~l~~~~~~~~~~~lv 835 (1049)
.++|++.+.||+|+||.||+|...+++.||+|++...... ..+.+.+|++++++++| |||+++++++.+++..++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 3468999999999999999999888999999999755322 24678899999999976 9999999999999999999
Q ss_pred EeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCc
Q 039290 836 LEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEE 915 (1049)
Q Consensus 836 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~ 915 (1049)
|| +.+++|.+++.... .+++.++..++.|+++||+||| +.||+||||||+||+++ ++.+||+|||+++......
T Consensus 88 ~e-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH---~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~ 161 (343)
T 3dbq_A 88 ME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 161 (343)
T ss_dssp EC-CCSEEHHHHHHHSC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC----
T ss_pred Ee-CCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEE-CCcEEEeecccccccCccc
Confidence 99 45789999998754 5899999999999999999999 99999999999999997 5789999999998765433
Q ss_pred cc-cccccccccCcccccccCC-----------CCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccC
Q 039290 916 SM-RQTKTLGTIGYMAPEYGRE-----------GKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSC 983 (1049)
Q Consensus 916 ~~-~~~~~~~~~~y~aPE~~~~-----------~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 983 (1049)
.. ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...............
T Consensus 162 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~------ 235 (343)
T 3dbq_A 162 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID------ 235 (343)
T ss_dssp --------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHC------
T ss_pred ccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhc------
Confidence 21 2334579999999999854 67889999999999999999999999753322111111110
Q ss_pred CcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 039290 984 SITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRL 1036 (1049)
Q Consensus 984 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L 1036 (1049)
... ....+...+.++.+++.+||+.||.+|||++|+++|-
T Consensus 236 -------~~~------~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp 275 (343)
T 3dbq_A 236 -------PNH------EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 275 (343)
T ss_dssp -------TTS------CCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred -------CCc------ccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCc
Confidence 000 0011112245688999999999999999999999874
No 173
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.7e-38 Score=356.74 Aligned_cols=242 Identities=26% Similarity=0.359 Sum_probs=203.7
Q ss_pred hcCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeecccC--------CCHHHHHHHHHHHhhcCCCceeeEEeeeecCC
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEFD--------GSLESFHAECKVMGSIRHRNLVKIISSCSNND 830 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~ 830 (1049)
.++|++.+.||+|+||+||+|+. .+++.||+|+++.... .....+.+|++++++++||||+++++++.+.+
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~ 102 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG 102 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence 45799999999999999999995 5788999999976531 13346788999999999999999999999999
Q ss_pred eeEEEEeccCCC-ChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCce
Q 039290 831 FKALVLEYMSNG-SLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAK 909 (1049)
Q Consensus 831 ~~~lv~e~~~~g-~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~ 909 (1049)
..++||||+.+| +|.+++.... .+++..++.++.|++.||+||| ++||+||||||+||+++.++.+||+|||++.
T Consensus 103 ~~~lv~e~~~~g~~l~~~~~~~~-~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 178 (335)
T 3dls_A 103 FFQLVMEKHGSGLDLFAFIDRHP-RLDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSAA 178 (335)
T ss_dssp EEEEEEECCTTSCBHHHHHHTCC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEEeccCHHHEEEcCCCcEEEeecccce
Confidence 999999999777 9999887654 4899999999999999999999 9999999999999999999999999999998
Q ss_pred ecCCCccccccccccccCcccccccCCCCc-CcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchh
Q 039290 910 ILGKEESMRQTKTLGTIGYMAPEYGREGKV-SRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEV 988 (1049)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 988 (1049)
....... .....||+.|+|||++.+..+ +.++||||+||++|||++|..||...... .
T Consensus 179 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-------~------------ 237 (335)
T 3dls_A 179 YLERGKL--FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET-------V------------ 237 (335)
T ss_dssp ECCTTCC--BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG-------T------------
T ss_pred ECCCCCc--eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH-------H------------
Confidence 7754332 234568999999999988776 78999999999999999999999752110 0
Q ss_pred cccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 989 ADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 989 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
.... ..+..++.++.+++.+||+.||++|||++|++++
T Consensus 238 -~~~~--------~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 238 -EAAI--------HPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp -TTCC--------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred -hhcc--------CCCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000 0011145678999999999999999999999987
No 174
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.8e-38 Score=350.93 Aligned_cols=270 Identities=20% Similarity=0.225 Sum_probs=201.0
Q ss_pred cCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccCC--CHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEEe
Q 039290 761 DGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFDG--SLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVLE 837 (1049)
Q Consensus 761 ~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 837 (1049)
++|++.+.||+|+||+||+|+.. +|+.||+|++...... ..+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 57899999999999999999965 6899999998654322 24567899999999999999999999999999999999
Q ss_pred ccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCccc
Q 039290 838 YMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEESM 917 (1049)
Q Consensus 838 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~~~ 917 (1049)
|+++++|.+++...+ .+++..+..++.|+++|++||| ++||+||||||+||+++.++.+||+|||++........
T Consensus 83 ~~~~~~l~~~~~~~~-~~~~~~~~~i~~~l~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 157 (311)
T 4agu_A 83 YCDHTVLHELDRYQR-GVPEHLVKSITWQTLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD- 157 (311)
T ss_dssp CCSEEHHHHHHHTSS-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred eCCCchHHHHHhhhc-CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc-
Confidence 999999988876543 4899999999999999999999 99999999999999999999999999999987653322
Q ss_pred cccccccccCcccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHh--hhhccccC----Ccchhcc
Q 039290 918 RQTKTLGTIGYMAPEYGRE-GKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRW--VGDSLLSC----SITEVAD 990 (1049)
Q Consensus 918 ~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~--~~~~~~~~----~~~~~~~ 990 (1049)
......+|+.|+|||++.+ ..++.++||||+|+++|||++|+.||......+...... .+...... .......
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (311)
T 4agu_A 158 YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFS 237 (311)
T ss_dssp --------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGT
T ss_pred ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccc
Confidence 2234568999999998865 678999999999999999999999997643322211110 00000000 0000000
Q ss_pred ccccccccc---CchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 991 ANLLNCEEN---DFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 991 ~~~~~~~~~---~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
......... ........+..+.+++.+||+.||++|||++|+++|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 238 GVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp TCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred cCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 000000000 001112356778999999999999999999999976
No 175
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=355.87 Aligned_cols=270 Identities=20% Similarity=0.233 Sum_probs=200.6
Q ss_pred cCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccCC-CHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEEec
Q 039290 761 DGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFDG-SLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVLEY 838 (1049)
Q Consensus 761 ~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 838 (1049)
++|++.+.||+|+||+||+|+.. +++.||+|++...... ....+.+|++++++++||||+++++++.+.+..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 57889999999999999999965 7899999999754322 223456799999999999999999999999999999999
Q ss_pred cCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCcccc
Q 039290 839 MSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEESMR 918 (1049)
Q Consensus 839 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~~~~ 918 (1049)
++ |+|.+++...+..+++.+++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||++........ .
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~-~ 156 (324)
T 3mtl_A 82 LD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK-T 156 (324)
T ss_dssp CS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCcCHHHEEECCCCCEEEccCcccccccCCcc-c
Confidence 97 4999998887777999999999999999999999 99999999999999999999999999999986543322 2
Q ss_pred ccccccccCcccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhh-hccccCCcchhccccc---
Q 039290 919 QTKTLGTIGYMAPEYGRE-GKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVG-DSLLSCSITEVADANL--- 993 (1049)
Q Consensus 919 ~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--- 993 (1049)
.....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||......+........ .......+........
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 236 (324)
T 3mtl_A 157 YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKT 236 (324)
T ss_dssp ------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHH
T ss_pred cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcc
Confidence 234568999999998876 56899999999999999999999999764332221111100 0000111111110000
Q ss_pred ---cc-ccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 994 ---LN-CEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 994 ---~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
.. ............+.++.+++.+|++.||++|||++|+++|
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 237 YNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp TCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 00 0000011223356778999999999999999999999986
No 176
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.3e-39 Score=361.39 Aligned_cols=267 Identities=22% Similarity=0.368 Sum_probs=191.3
Q ss_pred cCCCCCceecCCCcEEEEEEEeCCCcEEEEEEeecccCCCHHHHHHHHHHHhh--cCCCceeeEEeeeecCC----eeEE
Q 039290 761 DGFSENKLLGMGSFGSVYKGVLPDGMEIAAKVFHMEFDGSLESFHAECKVMGS--IRHRNLVKIISSCSNND----FKAL 834 (1049)
Q Consensus 761 ~~~~~~~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~hpniv~l~~~~~~~~----~~~l 834 (1049)
++|++.+.||+|+||.||+|++ +++.||||++... ....+.+|.+++.. ++||||+++++++.+.+ ..++
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 78 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-C-TTSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEE
T ss_pred ceeeehhhccCCCCeEEEEEEE-cCcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEE
Confidence 5799999999999999999987 4889999998643 44677888888887 78999999999998766 7899
Q ss_pred EEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHcc-----CCCCeEEcCCCCCCeeecCCCceEEecccCce
Q 039290 835 VLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFG-----YSTPIVHCDIKPSNVLLNESMVGHLSDFGIAK 909 (1049)
Q Consensus 835 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~-----~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~ 909 (1049)
||||+++|+|.+++... .+++.+++.++.|++.|++|||.. ++++|+||||||+||+++.++.+||+|||++.
T Consensus 79 v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a~ 156 (303)
T 3gxj_A 79 VSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 156 (303)
T ss_dssp EEECCTTCCHHHHHHHC--CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-C
T ss_pred EEeccCCCCHHHHHhcc--CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCcce
Confidence 99999999999999764 478888999999999999999932 26799999999999999999999999999997
Q ss_pred ecCCCccc---cccccccccCcccccccCCC------CcCcccchHHHHHHHHHHHhC----------CCCCCccccccc
Q 039290 910 ILGKEESM---RQTKTLGTIGYMAPEYGREG------KVSRKCDVYSYGIMLMETFTK----------KKPTDEIFAGEM 970 (1049)
Q Consensus 910 ~~~~~~~~---~~~~~~~~~~y~aPE~~~~~------~~~~~~DvwslG~il~elltg----------~~p~~~~~~~~~ 970 (1049)
........ ......||+.|+|||++.+. .++.++||||+||++|||++| ..||........
T Consensus 157 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~~ 236 (303)
T 3gxj_A 157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 236 (303)
T ss_dssp CEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-CC
T ss_pred eccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCCc
Confidence 65433321 12334689999999998765 455789999999999999999 455543222111
Q ss_pred hHHHhhhhccccCCcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhh
Q 039290 971 SLKRWVGDSLLSCSITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETL 1043 (1049)
Q Consensus 971 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~ 1043 (1049)
....... .+...........++ ...+++..+.+++.+||+.||++|||++|+++.|+++.++.
T Consensus 237 ~~~~~~~---------~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 237 SVEEMRK---------VVCEQKLRPNIPNRW-QSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp CCC-CHH---------HHTTSCCCCCCCGGG-GSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC-
T ss_pred cHHHHHH---------HHHHhhcCCCccccc-cchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhc
Confidence 1111100 011111111111111 12356788999999999999999999999999999887653
No 177
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=2e-38 Score=359.54 Aligned_cols=265 Identities=13% Similarity=0.148 Sum_probs=210.5
Q ss_pred cCCCCCceecCCCcEEEEEEEeCC---------CcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCceee----------
Q 039290 761 DGFSENKLLGMGSFGSVYKGVLPD---------GMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRNLVK---------- 821 (1049)
Q Consensus 761 ~~~~~~~~lg~G~fg~Vy~a~~~~---------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~---------- 821 (1049)
++|++.+.||+|+||.||+|+... ++.||+|++... +.+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 578999999999999999999753 789999998744 46889999999999999998
Q ss_pred -----EEeeeec-CCeeEEEEeccCCCChhhhhhcC-CCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeee
Q 039290 822 -----IISSCSN-NDFKALVLEYMSNGSLEKCLYSD-NYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLL 894 (1049)
Q Consensus 822 -----l~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~ 894 (1049)
+++++.. ++..++||||+ +++|.+++... ...+++.+++.++.|+++||+||| ++||+||||||+||++
T Consensus 117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIl~ 192 (352)
T 2jii_A 117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLH---ENEYVHGNVTAENIFV 192 (352)
T ss_dssp CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCGGGEEE
T ss_pred cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEE
Confidence 5666665 67889999999 99999999875 356999999999999999999999 9999999999999999
Q ss_pred cCCC--ceEEecccCceecCCCccc------cccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccc
Q 039290 895 NESM--VGHLSDFGIAKILGKEESM------RQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIF 966 (1049)
Q Consensus 895 ~~~~--~~kl~DfGla~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~ 966 (1049)
+.++ .+||+|||+++.+...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||....
T Consensus 193 ~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 272 (352)
T 2jii_A 193 DPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCL 272 (352)
T ss_dssp ETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred cCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCC
Confidence 9988 9999999999876543211 1133478999999999999899999999999999999999999998754
Q ss_pred cccchHHHhhhhccccCCcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhhhh
Q 039290 967 AGEMSLKRWVGDSLLSCSITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETLSA 1045 (1049)
Q Consensus 967 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~~~ 1045 (1049)
................. ....+. ......++.++.+++.+||+.||++|||++|+++.|+++.++...
T Consensus 273 ~~~~~~~~~~~~~~~~~--~~~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~ 340 (352)
T 2jii_A 273 PNTEDIMKQKQKFVDKP--GPFVGP---------CGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRV 340 (352)
T ss_dssp TCHHHHHHHHHHHHHSC--CCEECT---------TSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred cCHHHHHHHHHhccCCh--hhhhhh---------ccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCC
Confidence 33322222221111000 000000 000012356799999999999999999999999999999987653
No 178
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1.1e-37 Score=347.11 Aligned_cols=263 Identities=24% Similarity=0.325 Sum_probs=202.4
Q ss_pred hcCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeecccC---CCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEE
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEFD---GSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALV 835 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 835 (1049)
.++|++.+.||+|+||.||+|+. .+++.||+|+++.... ...+++.+|++++++++||||+++++++.+.+..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 45799999999999999999995 5789999999975332 2346788999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhc---CCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecC
Q 039290 836 LEYMSNGSLEKCLYS---DNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILG 912 (1049)
Q Consensus 836 ~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~ 912 (1049)
|||+++++|.+++.. ....+++..++.++.|+++|++||| +.||+||||||+||+++.++.+||+|||++....
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 999999999998864 3456899999999999999999999 9999999999999999999999999999998664
Q ss_pred CCccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhcccc
Q 039290 913 KEESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADAN 992 (1049)
Q Consensus 913 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 992 (1049)
.... ......+++.|+|||++.+..++.++||||+|+++|||++|..||.................. ..
T Consensus 188 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~----~~------ 256 (310)
T 2wqm_A 188 SKTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD----YP------ 256 (310)
T ss_dssp ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTC----SC------
T ss_pred CCCc-cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhccc----CC------
Confidence 3322 223356899999999999889999999999999999999999999753322222211111000 00
Q ss_pred cccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhhh
Q 039290 993 LLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETLS 1044 (1049)
Q Consensus 993 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~~ 1044 (1049)
......++.++.+++.+||+.||++|||+++++++|+++.....
T Consensus 257 --------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~ 300 (310)
T 2wqm_A 257 --------PLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTA 300 (310)
T ss_dssp --------CCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred --------CCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhh
Confidence 00012345678999999999999999999999999999987653
No 179
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=3.1e-37 Score=348.62 Aligned_cols=271 Identities=21% Similarity=0.345 Sum_probs=213.7
Q ss_pred HHHhcCCCCCceecCCCcEEEEEEEeCCCcEEEEEEeecccCCCHHHHHHHHHHHhh--cCCCceeeEEeeeecCC----
Q 039290 757 LRATDGFSENKLLGMGSFGSVYKGVLPDGMEIAAKVFHMEFDGSLESFHAECKVMGS--IRHRNLVKIISSCSNND---- 830 (1049)
Q Consensus 757 ~~~~~~~~~~~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~hpniv~l~~~~~~~~---- 830 (1049)
....++|++.+.||+|+||.||+|+. +++.||+|++... ....+.+|++++.. ++||||+++++++...+
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~ 113 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT 113 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCC
T ss_pred ccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccc
Confidence 34456899999999999999999998 5899999998643 34677889999887 68999999999998775
Q ss_pred eeEEEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHcc-----CCCCeEEcCCCCCCeeecCCCceEEecc
Q 039290 831 FKALVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFG-----YSTPIVHCDIKPSNVLLNESMVGHLSDF 905 (1049)
Q Consensus 831 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~-----~~~~ivH~Dlkp~NIl~~~~~~~kl~Df 905 (1049)
..++||||+++|+|.+++... .+++.+++.++.|++.|++|||.. ++.+|+||||||+||+++.++.+||+||
T Consensus 114 ~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 191 (342)
T 1b6c_B 114 QLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 191 (342)
T ss_dssp CEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCC
T ss_pred eeEEEEeecCCCcHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEEC
Confidence 789999999999999999764 489999999999999999999921 1478999999999999999999999999
Q ss_pred cCceecCCCccc---cccccccccCcccccccCCC------CcCcccchHHHHHHHHHHHhC----------CCCCCccc
Q 039290 906 GIAKILGKEESM---RQTKTLGTIGYMAPEYGREG------KVSRKCDVYSYGIMLMETFTK----------KKPTDEIF 966 (1049)
Q Consensus 906 Gla~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~------~~~~~~DvwslG~il~elltg----------~~p~~~~~ 966 (1049)
|++......... ......||+.|+|||++.+. .++.++||||+||++|||++| ..||....
T Consensus 192 g~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~ 271 (342)
T 1b6c_B 192 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 271 (342)
T ss_dssp TTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred CCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccC
Confidence 999876543321 22345789999999998765 344789999999999999999 67776544
Q ss_pred cccchHHHhhhhccccCCcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhh
Q 039290 967 AGEMSLKRWVGDSLLSCSITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETL 1043 (1049)
Q Consensus 967 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~ 1043 (1049)
..+.....+....... ........++ ...+++..+.+++.+||+.||++|||++|++++|+++.++.
T Consensus 272 ~~~~~~~~~~~~~~~~---------~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 272 PSDPSVEEMRKVVCEQ---------KLRPNIPNRW-QSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp CSSCCHHHHHHHHTTS---------CCCCCCCGGG-GTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred cCcccHHHHHHHHHHH---------HhCCCCcccc-cchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence 4333333322211110 0000011111 12457788999999999999999999999999999998764
No 180
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=6.2e-38 Score=356.93 Aligned_cols=278 Identities=21% Similarity=0.185 Sum_probs=211.5
Q ss_pred ccccccHHHHHHHhcCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeecccCCCHHHHHHHHHHHhhcC-----CCcee
Q 039290 747 TWRRISYQDLLRATDGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEFDGSLESFHAECKVMGSIR-----HRNLV 820 (1049)
Q Consensus 747 ~~~~~~~~~~~~~~~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----hpniv 820 (1049)
....+++++.....++|++.++||+|+||+||+|+. .+++.||||+++.. ......+..|+++++.++ ||||+
T Consensus 21 ~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv 99 (360)
T 3llt_A 21 EIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIV 99 (360)
T ss_dssp GGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBC
T ss_pred cceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCee
Confidence 444555666556678999999999999999999996 47889999998642 223456788999999986 99999
Q ss_pred eEEeeeecCCeeEEEEeccCCCChhhhhhcCC-CccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecC---
Q 039290 821 KIISSCSNNDFKALVLEYMSNGSLEKCLYSDN-YFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNE--- 896 (1049)
Q Consensus 821 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~--- 896 (1049)
++++++...+..++||||+ +++|.+++.... ..+++.+++.++.||+.||+||| ++||+||||||+||+++.
T Consensus 100 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~ 175 (360)
T 3llt_A 100 KYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLR---KMSLTHTDLKPENILLDDPYF 175 (360)
T ss_dssp CEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCTTC
T ss_pred cccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCcccEEEccccc
Confidence 9999999999999999999 889999987654 35899999999999999999999 999999999999999975
Q ss_pred ----------------------CCceEEecccCceecCCCccccccccccccCcccccccCCCCcCcccchHHHHHHHHH
Q 039290 897 ----------------------SMVGHLSDFGIAKILGKEESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLME 954 (1049)
Q Consensus 897 ----------------------~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~e 954 (1049)
++.+||+|||++....... ....||+.|+|||++.+..++.++||||+||++||
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 251 (360)
T 3llt_A 176 EKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH----GSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAE 251 (360)
T ss_dssp CEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC----CSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHH
T ss_pred cccccchhcccccccccccccCCCCEEEEeccCceecCCCC----cCccCcccccCcHHHcCCCCCCccchHHHHHHHHH
Confidence 7899999999998654322 34568999999999999999999999999999999
Q ss_pred HHhCCCCCCccccccchHHHhhhhccccCCc-----------chhcc-ccccccccc--------------CchhhHHHH
Q 039290 955 TFTKKKPTDEIFAGEMSLKRWVGDSLLSCSI-----------TEVAD-ANLLNCEEN--------------DFSAREQCV 1008 (1049)
Q Consensus 955 lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~-~~~~~~~~~--------------~~~~~~~~~ 1008 (1049)
|++|+.||......+.. .. ........+. ....+ ......... .........
T Consensus 252 ll~g~~pf~~~~~~~~~-~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 329 (360)
T 3llt_A 252 LYTGSLLFRTHEHMEHL-AM-MESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKH 329 (360)
T ss_dssp HHHSSCSCCCSSHHHHH-HH-HHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCC
T ss_pred HHHCCCCCCCCcHHHHH-HH-HHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchH
Confidence 99999999763322111 00 0000000000 00000 000000000 000111123
Q ss_pred HHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 1009 SSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 1009 ~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
+.+.+++.+||+.||++|||++|+++|
T Consensus 330 ~~l~~li~~~L~~dP~~Rpta~elL~h 356 (360)
T 3llt_A 330 ELFCDFLYSILQIDPTLRPSPAELLKH 356 (360)
T ss_dssp HHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred HHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 678899999999999999999999875
No 181
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.9e-38 Score=381.18 Aligned_cols=252 Identities=26% Similarity=0.449 Sum_probs=205.9
Q ss_pred eecCCCcEEEEEEEeC---CCcEEEEEEeeccc-CCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEEeccCCCC
Q 039290 768 LLGMGSFGSVYKGVLP---DGMEIAAKVFHMEF-DGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVLEYMSNGS 843 (1049)
Q Consensus 768 ~lg~G~fg~Vy~a~~~---~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g~ 843 (1049)
.||+|+||.||+|.+. ++..||||+++... ....+++.+|++++++++|||||++++++.+ +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 7999999999999853 56679999997653 3456889999999999999999999999976 56899999999999
Q ss_pred hhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCccc--cccc
Q 039290 844 LEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEESM--RQTK 921 (1049)
Q Consensus 844 L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~~~--~~~~ 921 (1049)
|.+++...+..+++.++..++.||++||+||| +++|+||||||+||+++.++.+||+|||+++........ ....
T Consensus 422 L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~ 498 (613)
T 2ozo_A 422 LHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSA 498 (613)
T ss_dssp HHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-----------
T ss_pred HHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccC
Confidence 99999877777999999999999999999999 999999999999999999999999999999876433321 1122
Q ss_pred cccccCcccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCCccccccchHHHhhhhccccCCcchhcccccccccccC
Q 039290 922 TLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFT-KKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLLNCEEND 1000 (1049)
Q Consensus 922 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1000 (1049)
..+++.|+|||++.+..++.++|||||||++|||++ |+.||......+. ...+.. ..+
T Consensus 499 ~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~--~~~i~~-------------------~~~ 557 (613)
T 2ozo_A 499 GKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV--MAFIEQ-------------------GKR 557 (613)
T ss_dssp ---CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHH--HHHHHT-------------------TCC
T ss_pred CCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH--HHHHHc-------------------CCC
Confidence 345689999999988899999999999999999998 9999976433221 111110 001
Q ss_pred chhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhhh
Q 039290 1001 FSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETLS 1044 (1049)
Q Consensus 1001 ~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~~ 1044 (1049)
...+..++.++.++|.+||+.||++||+++++++.|+++..+..
T Consensus 558 ~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~ 601 (613)
T 2ozo_A 558 MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLA 601 (613)
T ss_dssp CCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHS
T ss_pred CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhc
Confidence 12223467789999999999999999999999999999887654
No 182
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1.4e-37 Score=354.34 Aligned_cols=252 Identities=17% Similarity=0.134 Sum_probs=207.0
Q ss_pred hcCCCCCceecCCCcEEEEEEE------eCCCcEEEEEEeecccCCCHHHHHHHHHHHhhcC---CCceeeEEeeeecCC
Q 039290 760 TDGFSENKLLGMGSFGSVYKGV------LPDGMEIAAKVFHMEFDGSLESFHAECKVMGSIR---HRNLVKIISSCSNND 830 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~------~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---hpniv~l~~~~~~~~ 830 (1049)
.++|.+.+.||+|+||+||+|. ..+++.||+|+++.. ...++.+|+++++.++ |+||+++++++...+
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~ 140 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQN 140 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSS
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCC
Confidence 4678999999999999999994 457889999998643 4567888888888887 899999999999999
Q ss_pred eeEEEEeccCCCChhhhhhc----CCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecC----------
Q 039290 831 FKALVLEYMSNGSLEKCLYS----DNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNE---------- 896 (1049)
Q Consensus 831 ~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~---------- 896 (1049)
..++||||+++|+|.+++.. ....+++.+++.++.|+++||+||| ++||+||||||+|||++.
T Consensus 141 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~ivHrDiKp~NIll~~~~~~~~~~~~ 217 (365)
T 3e7e_A 141 GSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDDEDD 217 (365)
T ss_dssp CEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECGGGTCC-----
T ss_pred CcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEecccccCcccccc
Confidence 99999999999999999975 3456999999999999999999999 999999999999999998
Q ss_pred -CCceEEecccCceecCCC-ccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHH
Q 039290 897 -SMVGHLSDFGIAKILGKE-ESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKR 974 (1049)
Q Consensus 897 -~~~~kl~DfGla~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~ 974 (1049)
++.+||+|||+|+.+... .........||+.|+|||++.+..++.++||||+||++|||++|+.||.....+.....
T Consensus 218 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~- 296 (365)
T 3e7e_A 218 LSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKPE- 296 (365)
T ss_dssp -CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEEEC-
T ss_pred ccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCceeec-
Confidence 899999999999865321 22233456799999999999999999999999999999999999999865322211100
Q ss_pred hhhhccccCCcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCC-CCHHHHHHHHHHHHHhh
Q 039290 975 WVGDSLLSCSITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKR-ISMKDVANRLVRIRETL 1043 (1049)
Q Consensus 975 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R-pt~~ell~~L~~i~~~~ 1043 (1049)
... .+. ...+.+.+++.+|++.+|.+| |+++++.+.|+++..+.
T Consensus 297 ----------------~~~-----~~~----~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~ 341 (365)
T 3e7e_A 297 ----------------GLF-----RRL----PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQH 341 (365)
T ss_dssp ----------------SCC-----TTC----SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHH
T ss_pred ----------------hhc-----ccc----CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHh
Confidence 000 000 124567889999999999998 58888888888877653
No 183
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=5.9e-38 Score=344.47 Aligned_cols=250 Identities=27% Similarity=0.354 Sum_probs=199.3
Q ss_pred cCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeeccc-CCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEEec
Q 039290 761 DGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEF-DGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVLEY 838 (1049)
Q Consensus 761 ~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 838 (1049)
++|.+.+.||+|+||+||+|+. .++..||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 4688899999999999999996 478899999997654 34568899999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcC---CCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeee---cCCCceEEecccCceecC
Q 039290 839 MSNGSLEKCLYSD---NYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLL---NESMVGHLSDFGIAKILG 912 (1049)
Q Consensus 839 ~~~g~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~---~~~~~~kl~DfGla~~~~ 912 (1049)
+++|+|.+++... ...+++..++.++.|+++||+||| +.||+||||||+||++ +.++.+||+|||++....
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~ 178 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence 9999999988543 346899999999999999999999 9999999999999999 456889999999998664
Q ss_pred CCccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhcccc
Q 039290 913 KEESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADAN 992 (1049)
Q Consensus 913 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 992 (1049)
... ......+++.|+|||++. ..++.++||||+||++|||++|+.||......+........ ...
T Consensus 179 ~~~--~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~----~~~-------- 243 (285)
T 3is5_A 179 SDE--HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYK----EPN-------- 243 (285)
T ss_dssp ----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC----CCC--------
T ss_pred Ccc--cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccC----Ccc--------
Confidence 332 223456899999999875 57899999999999999999999999764322221111100 000
Q ss_pred cccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 993 LLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 993 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
.. ......++++.+++.+||+.||++|||++|++++
T Consensus 244 ~~-------~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 244 YA-------VECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp CC-------C--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred cc-------cccCcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00 0001134578899999999999999999999875
No 184
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=3.4e-38 Score=347.72 Aligned_cols=259 Identities=26% Similarity=0.382 Sum_probs=207.4
Q ss_pred hcCCCCCc-eecCCCcEEEEEEEe---CCCcEEEEEEeecccCC--CHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeE
Q 039290 760 TDGFSENK-LLGMGSFGSVYKGVL---PDGMEIAAKVFHMEFDG--SLESFHAECKVMGSIRHRNLVKIISSCSNNDFKA 833 (1049)
Q Consensus 760 ~~~~~~~~-~lg~G~fg~Vy~a~~---~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~ 833 (1049)
..+|.+.+ .||+|+||.||+|.+ .+++.||||+++..... ..+++.+|+++++.++||||+++++++ +.+..+
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~ 93 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM 93 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence 45677777 999999999999963 35678999999765322 256799999999999999999999999 556789
Q ss_pred EEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCC
Q 039290 834 LVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGK 913 (1049)
Q Consensus 834 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~ 913 (1049)
+||||+++++|.+++...+ .+++.+++.++.|+++|++||| +.||+||||||+||+++.++.+||+|||++.....
T Consensus 94 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 169 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 169 (291)
T ss_dssp EEEECCTTEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred EEEEeCCCCCHHHHHHhCc-CCCHHHHHHHHHHHHHHHHHHH---hCCeEcCCCCcceEEEeCCCcEEEccCCcceeecc
Confidence 9999999999999998754 4899999999999999999999 99999999999999999999999999999987754
Q ss_pred Ccccc--ccccccccCcccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCCccccccchHHHhhhhccccCCcchhcc
Q 039290 914 EESMR--QTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFT-KKKPTDEIFAGEMSLKRWVGDSLLSCSITEVAD 990 (1049)
Q Consensus 914 ~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1049)
..... .....+++.|+|||++.+..++.++||||+|+++|||++ |+.||......+. ...+....
T Consensus 170 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~--~~~~~~~~---------- 237 (291)
T 1xbb_A 170 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV--TAMLEKGE---------- 237 (291)
T ss_dssp TCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH--HHHHHTTC----------
T ss_pred CCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHH--HHHHHcCC----------
Confidence 43221 222345688999999988889999999999999999999 9999976332211 11111000
Q ss_pred cccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhhh
Q 039290 991 ANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETLS 1044 (1049)
Q Consensus 991 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~~ 1044 (1049)
+...+..++..+.+++.+||+.||++||++.|+++.|+++..+..
T Consensus 238 ---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~ 282 (291)
T 1xbb_A 238 ---------RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV 282 (291)
T ss_dssp ---------CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHH
T ss_pred ---------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHh
Confidence 011122356789999999999999999999999999999887643
No 185
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1.3e-38 Score=380.05 Aligned_cols=257 Identities=28% Similarity=0.436 Sum_probs=212.4
Q ss_pred hcCCCCCceecCCCcEEEEEEEeCCCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEEecc
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLPDGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVLEYM 839 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 839 (1049)
.++|++.+.||+|+||.||+|++.++..||||+++... ...+++.+|++++++++||||+++++++.+ +..++||||+
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~ 343 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 343 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehh
Confidence 45688889999999999999999888899999997643 346789999999999999999999999876 6789999999
Q ss_pred CCCChhhhhhcC-CCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCcccc
Q 039290 840 SNGSLEKCLYSD-NYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEESMR 918 (1049)
Q Consensus 840 ~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~~~~ 918 (1049)
++|+|.+++... ...+++.+++.++.||++||+||| +++|+||||||+|||++.++.+||+|||+++.........
T Consensus 344 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 420 (535)
T 2h8h_A 344 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 420 (535)
T ss_dssp TTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHT
T ss_pred cCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceec
Confidence 999999999753 345899999999999999999999 9999999999999999999999999999998764332222
Q ss_pred ccccccccCcccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCCccccccchHHHhhhhccccCCcchhccccccccc
Q 039290 919 QTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFT-KKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLLNCE 997 (1049)
Q Consensus 919 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1049)
.....++..|+|||++....++.++|||||||++|||++ |+.||......+.. ..+...
T Consensus 421 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~--~~i~~~------------------ 480 (535)
T 2h8h_A 421 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL--DQVERG------------------ 480 (535)
T ss_dssp TCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHH--HHHHTT------------------
T ss_pred ccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHH--HHHHcC------------------
Confidence 233456788999999988899999999999999999999 99999764322211 111000
Q ss_pred ccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHh
Q 039290 998 ENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRET 1042 (1049)
Q Consensus 998 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~ 1042 (1049)
.+...+..++.++.++|.+||+.||++|||++++++.|+++...
T Consensus 481 -~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 524 (535)
T 2h8h_A 481 -YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 524 (535)
T ss_dssp -CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred -CCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence 01112234667899999999999999999999999999987543
No 186
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1.1e-37 Score=367.94 Aligned_cols=251 Identities=24% Similarity=0.328 Sum_probs=209.3
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeeccc---CCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEE
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEF---DGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALV 835 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 835 (1049)
.++|+..+.||+|+||.||+|+.. +|+.||+|++.... ......+.+|+++++.++||||+++++++.+.+..++|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 356888999999999999999964 79999999996542 44567789999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCC-CccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCC
Q 039290 836 LEYMSNGSLEKCLYSDN-YFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKE 914 (1049)
Q Consensus 836 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~ 914 (1049)
|||++||+|.+++...+ ..+++..++.++.||+.||+||| ++||+||||||+||+++.++.+||+|||+++.....
T Consensus 263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH---~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~ 339 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 339 (576)
T ss_dssp ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCchheEEEeCCCCeEEEecccceecccC
Confidence 99999999999987654 35899999999999999999999 999999999999999999999999999999877543
Q ss_pred ccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccch--HHHhhhhccccCCcchhcccc
Q 039290 915 ESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMS--LKRWVGDSLLSCSITEVADAN 992 (1049)
Q Consensus 915 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 992 (1049)
.. ....+||+.|+|||++.+..++.++||||+||++|||++|..||......... ....+...
T Consensus 340 ~~--~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~------------- 404 (576)
T 2acx_A 340 QT--IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV------------- 404 (576)
T ss_dssp CC--EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHC-------------
T ss_pred cc--ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcc-------------
Confidence 32 23457999999999999989999999999999999999999999764322111 11111000
Q ss_pred cccccccCchhhHHHHHHHHHHHhhccccCCCCCC-----CHHHHHHH
Q 039290 993 LLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRI-----SMKDVANR 1035 (1049)
Q Consensus 993 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----t~~ell~~ 1035 (1049)
....+...+.++.+++.+||+.||++|| +++|+++|
T Consensus 405 -------~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 405 -------PEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp -------CCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred -------cccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 0011123456789999999999999999 78999876
No 187
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.8e-38 Score=364.94 Aligned_cols=269 Identities=24% Similarity=0.353 Sum_probs=193.8
Q ss_pred HhcCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeecccC--CCHHHHHHHHHHHhhcC-CCceeeEEeeeecCC--ee
Q 039290 759 ATDGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEFD--GSLESFHAECKVMGSIR-HRNLVKIISSCSNND--FK 832 (1049)
Q Consensus 759 ~~~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~-hpniv~l~~~~~~~~--~~ 832 (1049)
..++|++.+.||+|+||.||+|.. .+++.||+|++..... ....++.+|+.+++++. ||||+++++++...+ ..
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 356899999999999999999995 4789999999865432 23456788999999997 999999999997544 78
Q ss_pred EEEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecC
Q 039290 833 ALVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILG 912 (1049)
Q Consensus 833 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~ 912 (1049)
|+||||++ ++|.+++... .+++..+..++.|+++||+||| +.||+||||||+||+++.++.+||+|||+|+.+.
T Consensus 87 ~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 160 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFV 160 (388)
T ss_dssp EEEEECCS-EEHHHHHHHT--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEESS
T ss_pred EEEecccC-cCHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHeEEcCCCCEEecCCccccccc
Confidence 99999997 5899988764 4899999999999999999999 9999999999999999999999999999998753
Q ss_pred CCc--------------------cccccccccccCcccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCCccccccch
Q 039290 913 KEE--------------------SMRQTKTLGTIGYMAPEYGRE-GKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMS 971 (1049)
Q Consensus 913 ~~~--------------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~ 971 (1049)
... .......+||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+....+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~- 239 (388)
T 3oz6_A 161 NIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQ- 239 (388)
T ss_dssp SCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-
T ss_pred ccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHH-
Confidence 211 112234579999999999876 6789999999999999999999999976332211
Q ss_pred HHHhhhhccccCCcchhc---cc-------cc-------ccccccCch----------hhHHHHHHHHHHHhhccccCCC
Q 039290 972 LKRWVGDSLLSCSITEVA---DA-------NL-------LNCEENDFS----------AREQCVSSIFSLAMDCTVDLPE 1024 (1049)
Q Consensus 972 ~~~~~~~~~~~~~~~~~~---~~-------~~-------~~~~~~~~~----------~~~~~~~~l~~li~~cl~~dP~ 1024 (1049)
.....+ ....+....+. .+ .+ .......+. ....+++++.+++.+||+.||+
T Consensus 240 ~~~i~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~ 318 (388)
T 3oz6_A 240 LERIIG-VIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPN 318 (388)
T ss_dssp HHHHHH-HHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGG
T ss_pred HHHHHH-hcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcc
Confidence 111111 00000000000 00 00 000000000 0013456799999999999999
Q ss_pred CCCCHHHHHHH
Q 039290 1025 KRISMKDVANR 1035 (1049)
Q Consensus 1025 ~Rpt~~ell~~ 1035 (1049)
+|||++|+++|
T Consensus 319 ~R~t~~e~l~H 329 (388)
T 3oz6_A 319 KRISANDALKH 329 (388)
T ss_dssp GSCCHHHHTTS
T ss_pred cCCCHHHHhCC
Confidence 99999999987
No 188
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=7.1e-38 Score=349.07 Aligned_cols=263 Identities=23% Similarity=0.403 Sum_probs=201.4
Q ss_pred HHhcCCCCCceecCCCcEEEEEEEeC----CCcEEEEEEeecccC--CCHHHHHHHHHHHhhcCCCceeeEEeeeecCC-
Q 039290 758 RATDGFSENKLLGMGSFGSVYKGVLP----DGMEIAAKVFHMEFD--GSLESFHAECKVMGSIRHRNLVKIISSCSNND- 830 (1049)
Q Consensus 758 ~~~~~~~~~~~lg~G~fg~Vy~a~~~----~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~- 830 (1049)
...++|.+.+.||+|+||.||+|+.. ++..||+|+++.... ...+.+.+|++++++++||||+++++++.+.+
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 110 (313)
T 3brb_A 31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSS 110 (313)
T ss_dssp CCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC---
T ss_pred cCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccc
Confidence 34567889999999999999999853 345899999975532 23467899999999999999999999997754
Q ss_pred ----eeEEEEeccCCCChhhhhhc-----CCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceE
Q 039290 831 ----FKALVLEYMSNGSLEKCLYS-----DNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGH 901 (1049)
Q Consensus 831 ----~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~k 901 (1049)
..++||||+++|+|.+++.. ....+++.+++.++.|+++||+||| +.||+||||||+||+++.++.+|
T Consensus 111 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~k 187 (313)
T 3brb_A 111 QGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVC 187 (313)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCSGGGEEECTTSCEE
T ss_pred cCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEE
Confidence 35999999999999999843 3346899999999999999999999 99999999999999999999999
Q ss_pred EecccCceecCCCccc-cccccccccCcccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCCccccccchHHHhhhhc
Q 039290 902 LSDFGIAKILGKEESM-RQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFT-KKKPTDEIFAGEMSLKRWVGDS 979 (1049)
Q Consensus 902 l~DfGla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~ 979 (1049)
|+|||++......... ......+++.|+|||.+.+..++.++||||+|+++|||++ |..||......+.... .....
T Consensus 188 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~-~~~~~ 266 (313)
T 3brb_A 188 VADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDY-LLHGH 266 (313)
T ss_dssp ECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHH-HHTTC
T ss_pred EeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHH-HHcCC
Confidence 9999999876443221 2233456789999999998899999999999999999999 8889876433221111 10000
Q ss_pred cccCCcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhhh
Q 039290 980 LLSCSITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETLS 1044 (1049)
Q Consensus 980 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~~ 1044 (1049)
+...+..++.++.+++.+||+.||++|||+++++++|+++.+++.
T Consensus 267 --------------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~lp 311 (313)
T 3brb_A 267 --------------------RLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLP 311 (313)
T ss_dssp --------------------CCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred --------------------CCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence 011123355679999999999999999999999999999988764
No 189
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=2.7e-38 Score=355.36 Aligned_cols=253 Identities=21% Similarity=0.318 Sum_probs=202.1
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccCCCHHHHHHHHHHHhhc-CCCceeeEEeeeecCCeeEEEEe
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFDGSLESFHAECKVMGSI-RHRNLVKIISSCSNNDFKALVLE 837 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e 837 (1049)
.++|++.+.||+|+||+||+|+.. +++.||+|+++.... ...+|++++.++ +||||+++++++.+.+..++|||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E 96 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE 96 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 457999999999999999999965 688999999976533 245688888888 79999999999999999999999
Q ss_pred ccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCC----CceEEecccCceecCC
Q 039290 838 YMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNES----MVGHLSDFGIAKILGK 913 (1049)
Q Consensus 838 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~----~~~kl~DfGla~~~~~ 913 (1049)
|+++|+|.+++...+ .+++.++..++.||+.|++||| ++||+||||||+||++..+ +.+||+|||++.....
T Consensus 97 ~~~gg~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH---~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~ 172 (342)
T 2qr7_A 97 LMKGGELLDKILRQK-FFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA 172 (342)
T ss_dssp CCCSCBHHHHHHTCT-TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBC
T ss_pred CCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcC
Confidence 999999999987654 4899999999999999999999 9999999999999998532 3599999999987644
Q ss_pred CccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccc-hHHHhhhhccccCCcchhcccc
Q 039290 914 EESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEM-SLKRWVGDSLLSCSITEVADAN 992 (1049)
Q Consensus 914 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 992 (1049)
... ......+|+.|+|||++.+..++.++||||+||++|||++|..||........ .....+....
T Consensus 173 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~------------ 239 (342)
T 2qr7_A 173 ENG-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGK------------ 239 (342)
T ss_dssp TTC-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCC------------
T ss_pred CCC-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCC------------
Confidence 332 23345789999999999888899999999999999999999999975322111 1111111000
Q ss_pred cccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 039290 993 LLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLV 1037 (1049)
Q Consensus 993 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~ 1037 (1049)
...........+.++.+++.+||+.||++|||+.|+++|-.
T Consensus 240 ----~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~ 280 (342)
T 2qr7_A 240 ----FSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPW 280 (342)
T ss_dssp ----CCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHH
T ss_pred ----cccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCe
Confidence 00000111235667899999999999999999999998743
No 190
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1.1e-37 Score=342.26 Aligned_cols=258 Identities=24% Similarity=0.297 Sum_probs=207.8
Q ss_pred cCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccC------CCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeE
Q 039290 761 DGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFD------GSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKA 833 (1049)
Q Consensus 761 ~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~ 833 (1049)
++|++.+.||+|+||.||+|+.. +++.||+|+++.... ...+.+.+|++++++++||||+++++++.+.+..+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 46889999999999999999965 789999999976432 13678999999999999999999999999999999
Q ss_pred EEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCC----ceEEecccCce
Q 039290 834 LVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESM----VGHLSDFGIAK 909 (1049)
Q Consensus 834 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~----~~kl~DfGla~ 909 (1049)
+||||+++++|.+++.... .+++.+++.++.|+++||+||| +.||+||||||+||+++.++ .+||+|||.+.
T Consensus 85 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~ 160 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEKE-SLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 160 (283)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEeecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence 9999999999999987643 4899999999999999999999 99999999999999998776 89999999998
Q ss_pred ecCCCccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhc
Q 039290 910 ILGKEESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVA 989 (1049)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 989 (1049)
....... .....+++.|+|||++.+..++.++||||+|+++|||++|..||......+. ...+...
T Consensus 161 ~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~----------- 226 (283)
T 3bhy_A 161 KIEAGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQET-LTNISAV----------- 226 (283)
T ss_dssp ECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHHHTT-----------
T ss_pred eccCCCc--ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHH-HHHhHhc-----------
Confidence 7644322 2345689999999999988999999999999999999999999976322211 1111000
Q ss_pred ccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH--HHHHHHh
Q 039290 990 DANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR--LVRIRET 1042 (1049)
Q Consensus 990 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~--L~~i~~~ 1042 (1049)
............+..+.+++.+||+.||++|||++|++++ ++++..+
T Consensus 227 ------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~ 275 (283)
T 3bhy_A 227 ------NYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRR 275 (283)
T ss_dssp ------CCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHHC
T ss_pred ------ccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHHH
Confidence 0000111223346678999999999999999999999986 5555443
No 191
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=2.7e-38 Score=357.22 Aligned_cols=266 Identities=17% Similarity=0.190 Sum_probs=202.9
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC----CCcEEEEEEeecccCC-----------CHHHHHHHHHHHhhcCCCceeeEEe
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP----DGMEIAAKVFHMEFDG-----------SLESFHAECKVMGSIRHRNLVKIIS 824 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~----~~~~vavK~~~~~~~~-----------~~~~~~~e~~~l~~l~hpniv~l~~ 824 (1049)
.++|++.+.||+|+||+||+|+.. ++..||+|++...... ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 357899999999999999999965 5778999998754321 1234667888899999999999999
Q ss_pred eeec----CCeeEEEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCC--
Q 039290 825 SCSN----NDFKALVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESM-- 898 (1049)
Q Consensus 825 ~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~-- 898 (1049)
++.+ .+..++||||+ +++|.+++...+ .+++.+++.++.|++.||+||| +.||+||||||+||+++.++
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~ 190 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIH---ENEYVHGDIKAANLLLGYKNPD 190 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEESSSTT
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCcCHHHEEEccCCCC
Confidence 9877 77899999999 999999987665 6899999999999999999999 99999999999999998777
Q ss_pred ceEEecccCceecCCCccc------cccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchH
Q 039290 899 VGHLSDFGIAKILGKEESM------RQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSL 972 (1049)
Q Consensus 899 ~~kl~DfGla~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~ 972 (1049)
.+||+|||+++.+...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||..........
T Consensus 191 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~ 270 (345)
T 2v62_A 191 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAV 270 (345)
T ss_dssp SEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHH
T ss_pred cEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHH
Confidence 9999999999876533211 1234578999999999998899999999999999999999999997533332222
Q ss_pred HHhhhhccccCCcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHH
Q 039290 973 KRWVGDSLLSCSITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRE 1041 (1049)
Q Consensus 973 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~ 1041 (1049)
.......... . ....... .....++.++.+++.+||+.||++|||++++++.|++...
T Consensus 271 ~~~~~~~~~~--~----~~~~~~~-----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 271 QTAKTNLLDE--L----PQSVLKW-----APSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHHHHHHHHT--T----THHHHHH-----SCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred HHHHHhhccc--c----cHHHHhh-----ccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 2211111100 0 0000000 0001356689999999999999999999999999987543
No 192
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.4e-37 Score=357.47 Aligned_cols=250 Identities=22% Similarity=0.296 Sum_probs=193.7
Q ss_pred cCCCCC-ceecCCCcEEEEEEEeC-CCcEEEEEEeecccCCCHHHHHHHHHHHhh-cCCCceeeEEeeeec----CCeeE
Q 039290 761 DGFSEN-KLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFDGSLESFHAECKVMGS-IRHRNLVKIISSCSN----NDFKA 833 (1049)
Q Consensus 761 ~~~~~~-~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~-l~hpniv~l~~~~~~----~~~~~ 833 (1049)
++|.+. +.||+|+||+||+|+.. +++.||+|+++.. ..+.+|++++.+ .+||||+++++++.. .+..+
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~ 135 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 135 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence 456665 68999999999999964 7889999998632 567888988754 489999999998865 56789
Q ss_pred EEEeccCCCChhhhhhcCC-CccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecC---CCceEEecccCce
Q 039290 834 LVLEYMSNGSLEKCLYSDN-YFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNE---SMVGHLSDFGIAK 909 (1049)
Q Consensus 834 lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~---~~~~kl~DfGla~ 909 (1049)
+||||+++|+|.+++.... ..+++.+++.++.||+.||+||| +.||+||||||+||+++. ++.+||+|||+++
T Consensus 136 lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~ 212 (400)
T 1nxk_A 136 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 212 (400)
T ss_dssp EEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCcceEEEecCCCCccEEEEeccccc
Confidence 9999999999999998653 36899999999999999999999 999999999999999997 7899999999998
Q ss_pred ecCCCccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccch--HHHhhhhccccCCcch
Q 039290 910 ILGKEESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMS--LKRWVGDSLLSCSITE 987 (1049)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~ 987 (1049)
...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||......... ....+....
T Consensus 213 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~------- 283 (400)
T 1nxk_A 213 ETTSHN--SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ------- 283 (400)
T ss_dssp ECC-------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTC-------
T ss_pred ccCCCC--ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCc-------
Confidence 764332 233467899999999999999999999999999999999999999764322110 111100000
Q ss_pred hcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 039290 988 VADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRL 1036 (1049)
Q Consensus 988 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L 1036 (1049)
..........++.++.+++.+||+.||++|||++|+++|-
T Consensus 284 ---------~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp 323 (400)
T 1nxk_A 284 ---------YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP 323 (400)
T ss_dssp ---------CCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred ---------ccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 0000011123567789999999999999999999999874
No 193
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=3.9e-38 Score=355.24 Aligned_cols=247 Identities=25% Similarity=0.327 Sum_probs=202.2
Q ss_pred cCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeecccCC---CHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEE
Q 039290 761 DGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEFDG---SLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVL 836 (1049)
Q Consensus 761 ~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 836 (1049)
..|+..+.||+|+||+||+|+. .+++.||||++...... ..+++.+|++++++++||||+++++++.+.+..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 3488889999999999999995 57899999999754322 2357889999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCcc
Q 039290 837 EYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEES 916 (1049)
Q Consensus 837 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~~ 916 (1049)
||+. |++.+++......+++.+++.++.|+++||+||| +.||+||||||+||+++.++.+||+|||++......
T Consensus 134 e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~-- 207 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-- 207 (348)
T ss_dssp ECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB--
T ss_pred ecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCC--
Confidence 9997 5888888766667999999999999999999999 999999999999999999999999999999866432
Q ss_pred ccccccccccCcccccccC---CCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhccccc
Q 039290 917 MRQTKTLGTIGYMAPEYGR---EGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANL 993 (1049)
Q Consensus 917 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1049)
....||+.|+|||++. ...++.++||||+||++|||++|+.||......+.. ....... .+.
T Consensus 208 ---~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~-~~~~~~~----------~~~- 272 (348)
T 1u5q_A 208 ---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL-YHIAQNE----------SPA- 272 (348)
T ss_dssp ---CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH-HHHHHSC----------CCC-
T ss_pred ---CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH-HHHHhcC----------CCC-
Confidence 2356899999999874 567899999999999999999999998753221111 1111000 000
Q ss_pred ccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 039290 994 LNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRL 1036 (1049)
Q Consensus 994 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L 1036 (1049)
.....++..+.+++.+||+.||++|||++|++++.
T Consensus 273 --------~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~ 307 (348)
T 1u5q_A 273 --------LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR 307 (348)
T ss_dssp --------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCH
T ss_pred --------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence 00122456789999999999999999999998763
No 194
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1.9e-38 Score=371.30 Aligned_cols=249 Identities=24% Similarity=0.288 Sum_probs=197.4
Q ss_pred hcCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeeccc---CCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEE
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEF---DGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALV 835 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 835 (1049)
.++|++.+.||+|+||.||+|+. .+++.||+|+++... ......+.+|+++++.++||||+++++++.+.+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 45799999999999999999995 478999999997542 33446778899999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCC-CCeEEcCCCCCCeeecCCCceEEecccCceecCCC
Q 039290 836 LEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYS-TPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKE 914 (1049)
Q Consensus 836 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~ 914 (1049)
|||+++|+|.+++...+ .+++..+..++.|+++||+||| + +||+||||||+||+++.++.+||+|||+++.....
T Consensus 227 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 302 (446)
T 4ejn_A 227 MEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 302 (446)
T ss_dssp ECCCSSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-
T ss_pred EeeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHh---hcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCC
Confidence 99999999999887654 5899999999999999999999 8 89999999999999999999999999999864332
Q ss_pred ccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhcccccc
Q 039290 915 ESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLL 994 (1049)
Q Consensus 915 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1049)
. .......||+.|+|||++.+..++.++||||+||++|||++|+.||......+........
T Consensus 303 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~----------------- 364 (446)
T 4ejn_A 303 G-ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME----------------- 364 (446)
T ss_dssp -----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC-----------------
T ss_pred C-cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhC-----------------
Confidence 2 2234467999999999999999999999999999999999999999753222111110000
Q ss_pred cccccCchhhHHHHHHHHHHHhhccccCCCCCC-----CHHHHHHH
Q 039290 995 NCEENDFSAREQCVSSIFSLAMDCTVDLPEKRI-----SMKDVANR 1035 (1049)
Q Consensus 995 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----t~~ell~~ 1035 (1049)
....+...+.++.+++.+||+.||.+|| +++|+++|
T Consensus 365 -----~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 365 -----EIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405 (446)
T ss_dssp -----CCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred -----CCCCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence 0011123456789999999999999999 99999876
No 195
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=4.9e-38 Score=360.33 Aligned_cols=251 Identities=23% Similarity=0.350 Sum_probs=198.2
Q ss_pred cCCCCCceecCCCcEEEEEEEeCCCcEEEEEEeecccC--CCHHHHHHHHHHHhhcC--CCceeeEEeeeecCCeeEEEE
Q 039290 761 DGFSENKLLGMGSFGSVYKGVLPDGMEIAAKVFHMEFD--GSLESFHAECKVMGSIR--HRNLVKIISSCSNNDFKALVL 836 (1049)
Q Consensus 761 ~~~~~~~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~--hpniv~l~~~~~~~~~~~lv~ 836 (1049)
.+|++.+.||+|+||+||+|...+++.||||++..... ...+.+.+|++++++++ ||||+++++++...+..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 35899999999999999999988899999999975532 23467899999999996 599999999999999999999
Q ss_pred eccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCcc
Q 039290 837 EYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEES 916 (1049)
Q Consensus 837 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~~ 916 (1049)
| +.+++|.+++.... .+++.+++.++.||++||+||| +.+|+||||||+||+++ ++.+||+|||+++.+.....
T Consensus 136 E-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~ 209 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 209 (390)
T ss_dssp E-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-----
T ss_pred e-cCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCc
Confidence 9 56789999998765 5889999999999999999999 99999999999999996 57999999999987654332
Q ss_pred -ccccccccccCcccccccCC-----------CCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCC
Q 039290 917 -MRQTKTLGTIGYMAPEYGRE-----------GKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCS 984 (1049)
Q Consensus 917 -~~~~~~~~~~~y~aPE~~~~-----------~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 984 (1049)
......+||+.|+|||++.+ ..++.++||||+||++|||++|+.||..............
T Consensus 210 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~-------- 281 (390)
T 2zmd_A 210 SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII-------- 281 (390)
T ss_dssp ----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHH--------
T ss_pred cccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHh--------
Confidence 12334579999999998864 3688999999999999999999999975322211111111
Q ss_pred cchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 039290 985 ITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRL 1036 (1049)
Q Consensus 985 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L 1036 (1049)
+... ....+...+.++.+++.+||+.||++|||++|++++-
T Consensus 282 -----~~~~------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp 322 (390)
T 2zmd_A 282 -----DPNH------EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 322 (390)
T ss_dssp -----CTTS------CCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred -----Cccc------cCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhCc
Confidence 1000 0000111245689999999999999999999999763
No 196
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.2e-38 Score=357.59 Aligned_cols=255 Identities=24% Similarity=0.300 Sum_probs=206.8
Q ss_pred hcCCCCCceecCCCcEEEEEEEe----CCCcEEEEEEeeccc----CCCHHHHHHHHHHHhhc-CCCceeeEEeeeecCC
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVL----PDGMEIAAKVFHMEF----DGSLESFHAECKVMGSI-RHRNLVKIISSCSNND 830 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~ 830 (1049)
.++|++.+.||+|+||.||+|+. .+++.||||+++... ....+.+.+|+++++++ +||||+++++++.+.+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 35789999999999999999996 478999999986532 23456678899999999 6999999999999999
Q ss_pred eeEEEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCcee
Q 039290 831 FKALVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKI 910 (1049)
Q Consensus 831 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~ 910 (1049)
..++||||+++|+|.+++.... .+++.+++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 208 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKE 208 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred eEEEEeecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCcEEEeeCCCCee
Confidence 9999999999999999987654 4899999999999999999999 99999999999999999999999999999987
Q ss_pred cCCCccccccccccccCcccccccCC--CCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchh
Q 039290 911 LGKEESMRQTKTLGTIGYMAPEYGRE--GKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEV 988 (1049)
Q Consensus 911 ~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 988 (1049)
+............||+.|+|||++.+ ..++.++|||||||++|||++|+.||.......... .+.....
T Consensus 209 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~-~~~~~~~-------- 279 (355)
T 1vzo_A 209 FVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQA-EISRRIL-------- 279 (355)
T ss_dssp CCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHH-HHHHHHH--------
T ss_pred cccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHH-HHHHHHh--------
Confidence 75544444445679999999999875 457899999999999999999999997533222211 1111000
Q ss_pred cccccccccccCchhhHHHHHHHHHHHhhccccCCCCCC-----CHHHHHHHH
Q 039290 989 ADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRI-----SMKDVANRL 1036 (1049)
Q Consensus 989 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----t~~ell~~L 1036 (1049)
......+..++..+.+++.+||+.||++|| +++|++++.
T Consensus 280 ---------~~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 280 ---------KSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp ---------HCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred ---------ccCCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 000111223456789999999999999999 999999874
No 197
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.3e-38 Score=353.85 Aligned_cols=273 Identities=21% Similarity=0.249 Sum_probs=202.7
Q ss_pred HHhcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccCC-----CHHHHHHHHHHHhhcCCCceeeEEeeeecCCe
Q 039290 758 RATDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFDG-----SLESFHAECKVMGSIRHRNLVKIISSCSNNDF 831 (1049)
Q Consensus 758 ~~~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~~-----~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~ 831 (1049)
...++|++.+.||+|+||.||+|+.. +|+.||+|+++..... ..+.+.+|++++++++||||+++++++.+.+.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 34568999999999999999999964 6899999999754321 23578899999999999999999999999999
Q ss_pred eEEEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceec
Q 039290 832 KALVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKIL 911 (1049)
Q Consensus 832 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~ 911 (1049)
.++||||+++ +|.+++......+++.+++.++.|+++||+||| +.||+||||||+||+++.++.+||+|||+++..
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSF 162 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGGSTT
T ss_pred eEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCCHHHEEEcCCCCEEEEecccceec
Confidence 9999999986 899988877777899999999999999999999 999999999999999999999999999999876
Q ss_pred CCCccccccccccccCcccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhcc-ccCCcchh-
Q 039290 912 GKEESMRQTKTLGTIGYMAPEYGRE-GKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSL-LSCSITEV- 988 (1049)
Q Consensus 912 ~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~- 988 (1049)
..... ......+|+.|+|||++.+ ..++.++||||+||++|||++|..||......+.....+..... ....+.+.
T Consensus 163 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 241 (346)
T 1ua2_A 163 GSPNR-AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMC 241 (346)
T ss_dssp TSCCC-CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTT
T ss_pred cCCcc-cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhc
Confidence 43332 2334578999999999865 45889999999999999999999998764332221111111000 00000000
Q ss_pred --cccccccccccC--chhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 989 --ADANLLNCEEND--FSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 989 --~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
.+.......... .......+.++.+++.+|++.||++|||++|+++|
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 242 SLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp SSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 000000000000 01112345789999999999999999999999986
No 198
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=5.8e-38 Score=356.08 Aligned_cols=245 Identities=27% Similarity=0.294 Sum_probs=193.0
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccC---CCHHHHHHHHHH-HhhcCCCceeeEEeeeecCCeeEE
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFD---GSLESFHAECKV-MGSIRHRNLVKIISSCSNNDFKAL 834 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~-l~~l~hpniv~l~~~~~~~~~~~l 834 (1049)
.++|++.+.||+|+||+||+|+.. +++.||+|+++.... .....+.+|..+ ++.++||||+++++++.+.+..|+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 357899999999999999999965 688999999976542 234456677776 567899999999999999999999
Q ss_pred EEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCC
Q 039290 835 VLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKE 914 (1049)
Q Consensus 835 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~ 914 (1049)
||||+++|+|.+++...+ .+++..++.++.||+.||+||| ++||+||||||+||+++.++.+||+|||+++.....
T Consensus 117 v~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~ 192 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH 192 (373)
T ss_dssp EEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC
T ss_pred EEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEeeCccccccccC
Confidence 999999999999987654 4889999999999999999999 999999999999999999999999999999854322
Q ss_pred ccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhcccccc
Q 039290 915 ESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLL 994 (1049)
Q Consensus 915 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1049)
. .......||+.|+|||++.+..++.++||||+||++|||++|..||......+.. ..... .
T Consensus 193 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~-~~i~~-------------~--- 254 (373)
T 2r5t_A 193 N-STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMY-DNILN-------------K--- 254 (373)
T ss_dssp C-CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHH-HHHHH-------------S---
T ss_pred C-CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHH-HHHHh-------------c---
Confidence 2 2234567999999999999999999999999999999999999999753222111 11110 0
Q ss_pred cccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHH
Q 039290 995 NCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKD 1031 (1049)
Q Consensus 995 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~e 1031 (1049)
....+...+.++.+++.+|++.||++||++.+
T Consensus 255 -----~~~~~~~~~~~~~~li~~lL~~dp~~R~~~~~ 286 (373)
T 2r5t_A 255 -----PLQLKPNITNSARHLLEGLLQKDRTKRLGAKD 286 (373)
T ss_dssp -----CCCCCSSSCHHHHHHHHHHTCSSGGGSTTTTT
T ss_pred -----ccCCCCCCCHHHHHHHHHHcccCHHhCCCCCC
Confidence 00011224567899999999999999999853
No 199
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=7.8e-38 Score=347.14 Aligned_cols=251 Identities=23% Similarity=0.291 Sum_probs=203.9
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEEec
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVLEY 838 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 838 (1049)
.++|.+.+.||+|+||.||+|+.. +|+.||+|+++.......+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 356889999999999999999965 7899999999866544556789999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeee---cCCCceEEecccCceecCCCc
Q 039290 839 MSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLL---NESMVGHLSDFGIAKILGKEE 915 (1049)
Q Consensus 839 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~---~~~~~~kl~DfGla~~~~~~~ 915 (1049)
+++++|.+++...+ .+++.+++.++.|++.|++||| +.||+||||||+||++ +.++.+||+|||++......
T Consensus 88 ~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~- 162 (304)
T 2jam_A 88 VSGGELFDRILERG-VYTEKDASLVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG- 162 (304)
T ss_dssp CCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB-
T ss_pred CCCccHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC-
Confidence 99999999887654 4899999999999999999999 9999999999999999 77889999999999764332
Q ss_pred cccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhccccccc
Q 039290 916 SMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLLN 995 (1049)
Q Consensus 916 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1049)
......|++.|+|||++.+..++.++||||+||++|||++|..||......+. .........
T Consensus 163 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~i~~~~~--------------- 224 (304)
T 2jam_A 163 --IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKL-FEKIKEGYY--------------- 224 (304)
T ss_dssp --TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHHHHHCCC---------------
T ss_pred --ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHH-HHHHHcCCC---------------
Confidence 22335689999999999998999999999999999999999999975322211 111110000
Q ss_pred ccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 996 CEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 996 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
..........+.++.+++.+|++.||++|||++|++++
T Consensus 225 --~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 225 --EFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp --CCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred --CCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 00001112345678999999999999999999999986
No 200
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=1.5e-37 Score=363.73 Aligned_cols=266 Identities=21% Similarity=0.211 Sum_probs=197.4
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeeccc--CCCHHHHHHHHHHHhhcCCCceeeEEeeeecC------C
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEF--DGSLESFHAECKVMGSIRHRNLVKIISSCSNN------D 830 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~------~ 830 (1049)
.++|++.+.||+|+||+||+|... +++.||+|++.... ....+++.+|+++++.++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 468999999999999999999954 78899999997643 22356788999999999999999999998654 4
Q ss_pred eeEEEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCcee
Q 039290 831 FKALVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKI 910 (1049)
Q Consensus 831 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~ 910 (1049)
..|+||||+++ ++.+.+.. .+++.++..++.|+++||+||| +.||+||||||+||+++.++.+||+|||+|+.
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~---~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~ 213 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART 213 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCCC--
T ss_pred eEEEEEeCCCC-CHHHHHhh---cCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChHhEEEeCCCCEEEEEEEeeee
Confidence 57999999976 46665543 3889999999999999999999 99999999999999999999999999999987
Q ss_pred cCCCccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhcccc--------
Q 039290 911 LGKEESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLS-------- 982 (1049)
Q Consensus 911 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~-------- 982 (1049)
..... .....+||+.|+|||++.+..++.++||||+||++|||++|+.||.+....+. +..........
T Consensus 214 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~-~~~i~~~lg~p~~~~~~~~ 290 (464)
T 3ttj_A 214 AGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-WNKVIEQLGTPCPEFMKKL 290 (464)
T ss_dssp ---CC--CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHHHCSCCHHHHTTS
T ss_pred cCCCc--ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhcCCCCHHHHHHc
Confidence 64432 23446789999999999999999999999999999999999999976322111 11110000000
Q ss_pred -----------CCcchhccccccc--ccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 983 -----------CSITEVADANLLN--CEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 983 -----------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
........+.... ............+.++.+++.+||+.||++|||++|+++|
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 291 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp CHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred chhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000000000000 0001112223346789999999999999999999999987
No 201
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=5.4e-38 Score=343.66 Aligned_cols=252 Identities=30% Similarity=0.437 Sum_probs=201.3
Q ss_pred hcCCCCCceecCCCcEEEEEEEeCCCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCceeeEEeeeecC-CeeEEEEec
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLPDGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRNLVKIISSCSNN-DFKALVLEY 838 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~-~~~~lv~e~ 838 (1049)
.++|++.+.||+|+||.||+|+. +++.||+|+++.. ...+.+.+|++++++++||||+++++++.+. +..++||||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 96 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 96 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecch--hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence 45788999999999999999987 5889999998754 3457899999999999999999999987554 578999999
Q ss_pred cCCCChhhhhhcCCC-ccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCccc
Q 039290 839 MSNGSLEKCLYSDNY-FLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEESM 917 (1049)
Q Consensus 839 ~~~g~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~~~ 917 (1049)
+++++|.+++..... .+++..++.++.|+++|++||| ++||+||||||+||+++.++.+||+|||++.......
T Consensus 97 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-- 171 (278)
T 1byg_A 97 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-- 171 (278)
T ss_dssp CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred CCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH---hCCccccCCCcceEEEeCCCcEEEeeccccccccccc--
Confidence 999999999876433 3789999999999999999999 9999999999999999999999999999998654322
Q ss_pred cccccccccCcccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCCccccccchHHHhhhhccccCCcchhcccccccc
Q 039290 918 RQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFT-KKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLLNC 996 (1049)
Q Consensus 918 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1049)
....+++.|+|||++.+..++.++||||+|+++|||++ |..||......+.. ......
T Consensus 172 --~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~-~~~~~~------------------ 230 (278)
T 1byg_A 172 --DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV-PRVEKG------------------ 230 (278)
T ss_dssp ------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHH-HHHTTT------------------
T ss_pred --cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHH-HHHhcC------------------
Confidence 22356889999999988899999999999999999998 99999763322111 110000
Q ss_pred cccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHh
Q 039290 997 EENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRET 1042 (1049)
Q Consensus 997 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~ 1042 (1049)
.+...+..++..+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 231 --~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 231 --YKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp --CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --CCCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence 00111233567899999999999999999999999999998765
No 202
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.3e-37 Score=341.66 Aligned_cols=247 Identities=25% Similarity=0.359 Sum_probs=206.5
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeeccc---CCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEE
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEF---DGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALV 835 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 835 (1049)
.++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 357889999999999999999965 67889999986542 34457899999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCc
Q 039290 836 LEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEE 915 (1049)
Q Consensus 836 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~ 915 (1049)
|||+++++|.+++...+ .+++.+++.++.|+++|++||| +.||+||||||+||+++.++.+||+|||++.......
T Consensus 93 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~ 168 (284)
T 2vgo_A 93 LEFAPRGELYKELQKHG-RFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR 168 (284)
T ss_dssp ECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSC
T ss_pred EEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEEcCCCCEEEecccccccCcccc
Confidence 99999999999987654 4899999999999999999999 9999999999999999999999999999997654322
Q ss_pred cccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhccccccc
Q 039290 916 SMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLLN 995 (1049)
Q Consensus 916 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1049)
.....+++.|+|||++.+..++.++||||+|+++|||++|..||......+.. ..... .
T Consensus 169 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~~~~-------------~---- 227 (284)
T 2vgo_A 169 ---RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETH-RRIVN-------------V---- 227 (284)
T ss_dssp ---BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHH-HHHHT-------------T----
T ss_pred ---cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHH-HHHhc-------------c----
Confidence 23456899999999999989999999999999999999999999753222111 11000 0
Q ss_pred ccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 996 CEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 996 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
....+...+.++.+++.+|++.||++|||++|+++|
T Consensus 228 ----~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 228 ----DLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp ----CCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred ----ccCCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 001112245678999999999999999999999986
No 203
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=1.2e-37 Score=367.19 Aligned_cols=253 Identities=22% Similarity=0.312 Sum_probs=207.7
Q ss_pred cCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeeccc---CCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEE
Q 039290 761 DGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEF---DGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVL 836 (1049)
Q Consensus 761 ~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 836 (1049)
++|...+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..|+||
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 264 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM 264 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence 57888999999999999999964 79999999997543 345678899999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCC---CccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCC
Q 039290 837 EYMSNGSLEKCLYSDN---YFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGK 913 (1049)
Q Consensus 837 e~~~~g~L~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~ 913 (1049)
||++||+|.+++.... ..+++..++.++.||+.||+||| ++||+||||||+||+++.++.+||+|||+++....
T Consensus 265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~ 341 (543)
T 3c4z_A 265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341 (543)
T ss_dssp CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHH---HcCCcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence 9999999999987642 36899999999999999999999 99999999999999999999999999999987654
Q ss_pred CccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhccccc
Q 039290 914 EESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANL 993 (1049)
Q Consensus 914 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1049)
... ......||+.|+|||++.+..++.++||||+||++|||++|+.||......... ........ .
T Consensus 342 ~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~-~~~~~~i~---------~--- 407 (543)
T 3c4z_A 342 GQT-KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVEN-KELKQRVL---------E--- 407 (543)
T ss_dssp TCC-CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCH-HHHHHHHH---------H---
T ss_pred CCc-ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhH-HHHHHHHh---------h---
Confidence 332 223357999999999999999999999999999999999999999764322111 11110000 0
Q ss_pred ccccccCchhhHHHHHHHHHHHhhccccCCCCCCCH-----HHHHHH
Q 039290 994 LNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISM-----KDVANR 1035 (1049)
Q Consensus 994 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~-----~ell~~ 1035 (1049)
.....+..++.++.+++.+||+.||++||++ +++++|
T Consensus 408 -----~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~H 449 (543)
T 3c4z_A 408 -----QAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTH 449 (543)
T ss_dssp -----CCCCCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTS
T ss_pred -----cccCCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcC
Confidence 0011123356778999999999999999965 677654
No 204
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.9e-37 Score=345.88 Aligned_cols=251 Identities=28% Similarity=0.367 Sum_probs=204.2
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEEec
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVLEY 838 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 838 (1049)
.++|++.+.||+|+||.||+|+.. +|+.||+|++.... ..+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 28 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 105 (314)
T 3com_A 28 EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEY 105 (314)
T ss_dssp --CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeec
Confidence 457999999999999999999965 68999999997543 457889999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCcccc
Q 039290 839 MSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEESMR 918 (1049)
Q Consensus 839 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~~~~ 918 (1049)
+++++|.+++......+++.+++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||++........ .
T Consensus 106 ~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~-~ 181 (314)
T 3com_A 106 CGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA-K 181 (314)
T ss_dssp CTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS-C
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhcc-c
Confidence 9999999999765667899999999999999999999 99999999999999999999999999999987643322 2
Q ss_pred ccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhcccccccccc
Q 039290 919 QTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLLNCEE 998 (1049)
Q Consensus 919 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 998 (1049)
.....+++.|+|||++.+..++.++||||+|+++|+|++|..||......+.... ... ...
T Consensus 182 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~--~~~-----------------~~~ 242 (314)
T 3com_A 182 RNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFM--IPT-----------------NPP 242 (314)
T ss_dssp BCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH--HHH-----------------SCC
T ss_pred cCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHH--Hhc-----------------CCC
Confidence 3345689999999999988999999999999999999999999975322111100 000 000
Q ss_pred cCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 999 NDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 999 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
.....+..++..+.+++.+||+.||.+|||++|++++
T Consensus 243 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 243 PTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp CCCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred cccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 1111123345678999999999999999999999886
No 205
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=2.8e-37 Score=351.17 Aligned_cols=258 Identities=23% Similarity=0.333 Sum_probs=208.1
Q ss_pred HHHHHHhcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccCC--------CHHHHHHHHHHHhhc-CCCceeeEE
Q 039290 754 QDLLRATDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFDG--------SLESFHAECKVMGSI-RHRNLVKII 823 (1049)
Q Consensus 754 ~~~~~~~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~~--------~~~~~~~e~~~l~~l-~hpniv~l~ 823 (1049)
.......++|++.+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|+++++++ +||||++++
T Consensus 87 ~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 166 (365)
T 2y7j_A 87 AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLI 166 (365)
T ss_dssp HHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred hhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence 344445678999999999999999999975 7999999999765422 135678899999999 799999999
Q ss_pred eeeecCCeeEEEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEe
Q 039290 824 SSCSNNDFKALVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLS 903 (1049)
Q Consensus 824 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~ 903 (1049)
+++...+..++||||+++++|.+++.... .+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+
T Consensus 167 ~~~~~~~~~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH---~~gi~H~Dlkp~NIl~~~~~~ikl~ 242 (365)
T 2y7j_A 167 DSYESSSFMFLVFDLMRKGELFDYLTEKV-ALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRLS 242 (365)
T ss_dssp EEEEBSSEEEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEEC
T ss_pred EEEeeCCEEEEEEEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEE
Confidence 99999999999999999999999987643 4899999999999999999999 9999999999999999999999999
Q ss_pred cccCceecCCCccccccccccccCcccccccCC------CCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhh
Q 039290 904 DFGIAKILGKEESMRQTKTLGTIGYMAPEYGRE------GKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVG 977 (1049)
Q Consensus 904 DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~ 977 (1049)
|||++........ .....||+.|+|||++.+ ..++.++||||+||++|||++|..||......+ ....+.
T Consensus 243 DfG~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~--~~~~i~ 318 (365)
T 2y7j_A 243 DFGFSCHLEPGEK--LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQIL--MLRMIM 318 (365)
T ss_dssp CCTTCEECCTTCC--BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHH
T ss_pred ecCcccccCCCcc--cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHH--HHHHHH
Confidence 9999987754332 234678999999998753 358899999999999999999999997532111 111110
Q ss_pred hccccCCcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 978 DSLLSCSITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 978 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
... .....+....++.++.+++.+||+.||++|||++|++++
T Consensus 319 ~~~----------------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 319 EGQ----------------YQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp HTC----------------CCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred hCC----------------CCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 000 000011112345678999999999999999999999875
No 206
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1.4e-37 Score=360.19 Aligned_cols=253 Identities=22% Similarity=0.287 Sum_probs=195.4
Q ss_pred HhcCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeeccc--------CCCHHHHHHHHHHHhhcCCCceeeEEeeeecC
Q 039290 759 ATDGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEF--------DGSLESFHAECKVMGSIRHRNLVKIISSCSNN 829 (1049)
Q Consensus 759 ~~~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~ 829 (1049)
..++|.+.+.||+|+||+||+|.. .+++.||+|++.... ......+.+|++++++++||||+++++++..
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~- 211 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA- 211 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-
Confidence 457899999999999999999995 468999999997542 1122357899999999999999999999865
Q ss_pred CeeEEEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCC---CceEEeccc
Q 039290 830 DFKALVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNES---MVGHLSDFG 906 (1049)
Q Consensus 830 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~---~~~kl~DfG 906 (1049)
+..++||||+++|+|.+++.... .+++.+++.++.|+++||+||| +++|+||||||+||+++.+ +.+||+|||
T Consensus 212 ~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG 287 (419)
T 3i6u_A 212 EDYYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFG 287 (419)
T ss_dssp SEEEEEEECCTTCBGGGGTSSSC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSSSCCEEECCSS
T ss_pred CceEEEEEcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCCCcceEEEeecc
Confidence 45789999999999999887654 5899999999999999999999 9999999999999999754 459999999
Q ss_pred CceecCCCccccccccccccCcccccccCC---CCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccC
Q 039290 907 IAKILGKEESMRQTKTLGTIGYMAPEYGRE---GKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSC 983 (1049)
Q Consensus 907 la~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 983 (1049)
+++...... ......||+.|+|||++.+ ..++.++||||+||++|||++|..||.................
T Consensus 288 ~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~---- 361 (419)
T 3i6u_A 288 HSKILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGK---- 361 (419)
T ss_dssp TTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTC----
T ss_pred cceecCCCc--cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCC----
Confidence 998765332 2334678999999999853 5678899999999999999999999976433222221111100
Q ss_pred CcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 984 SITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 984 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
..........++.++.+++.+||+.||++|||++|+++|
T Consensus 362 -------------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 362 -------------YNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp -------------CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred -------------CCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 000111122356789999999999999999999999986
No 207
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=3.9e-37 Score=348.91 Aligned_cols=272 Identities=22% Similarity=0.281 Sum_probs=205.3
Q ss_pred hcCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeeccc--CCCHHHHHHHHHHHhhcCCCceeeEEeeeec--------
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEF--DGSLESFHAECKVMGSIRHRNLVKIISSCSN-------- 828 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~-------- 828 (1049)
.++|++.+.||+|+||+||+|+. .+|+.||+|++.... ......+.+|+++++.++||||+++++++.+
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 35799999999999999999996 578999999986554 2335678899999999999999999999876
Q ss_pred CCeeEEEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCc
Q 039290 829 NDFKALVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIA 908 (1049)
Q Consensus 829 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla 908 (1049)
.+..++||||+++ ++.+.+......+++.+++.++.|++.||+||| ++||+||||||+||+++.++.+||+|||++
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 4468999999975 888887776667999999999999999999999 999999999999999999999999999999
Q ss_pred eecCCCc---cccccccccccCcccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhh-hccccC
Q 039290 909 KILGKEE---SMRQTKTLGTIGYMAPEYGRE-GKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVG-DSLLSC 983 (1049)
Q Consensus 909 ~~~~~~~---~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~-~~~~~~ 983 (1049)
+.+.... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+........ ......
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 251 (351)
T 3mi9_A 172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 251 (351)
T ss_dssp EECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTT
T ss_pred ccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChh
Confidence 8765322 222344578999999998876 55899999999999999999999999864332221111000 000011
Q ss_pred Ccchhccccccc----ccccCchhh-----HHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 984 SITEVADANLLN----CEENDFSAR-----EQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 984 ~~~~~~~~~~~~----~~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
............ ......... ...++.+.+++.+|++.||++|||++|+++|
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 252 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp TSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 011110000000 000000111 1124568999999999999999999999986
No 208
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=4.3e-38 Score=348.97 Aligned_cols=253 Identities=23% Similarity=0.309 Sum_probs=202.8
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEEec
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVLEY 838 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 838 (1049)
.++|++.+.||+|+||.||+|+.. +++.||+|++........+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 97 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF 97 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence 457899999999999999999975 6889999999877666778999999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCcccc
Q 039290 839 MSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEESMR 918 (1049)
Q Consensus 839 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~~~~ 918 (1049)
+++++|.+++......+++.+++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||++....... ..
T Consensus 98 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~ 173 (302)
T 2j7t_A 98 CPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL-QK 173 (302)
T ss_dssp CTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHH-HC
T ss_pred CCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEECCCCCEEEEECCCCccccccc-cc
Confidence 9999999998876667999999999999999999999 9999999999999999999999999999876432111 11
Q ss_pred ccccccccCccccccc-----CCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhccccc
Q 039290 919 QTKTLGTIGYMAPEYG-----REGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANL 993 (1049)
Q Consensus 919 ~~~~~~~~~y~aPE~~-----~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1049)
.....+++.|+|||++ ....++.++||||+|+++|||++|..||......+.. .......
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~-------------- 238 (302)
T 2j7t_A 174 RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVL-LKIAKSD-------------- 238 (302)
T ss_dssp -----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH-HHHHHSC--------------
T ss_pred cccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHH-HHHhccC--------------
Confidence 2234689999999987 4567899999999999999999999999763322111 1111000
Q ss_pred ccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 994 LNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 994 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
......+..++.++.+++.+||+.||++|||++|+++|
T Consensus 239 ----~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 239 ----PPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp ----CCCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred ----CcccCCccccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 00011123345678999999999999999999999874
No 209
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=2.3e-38 Score=362.26 Aligned_cols=251 Identities=16% Similarity=0.167 Sum_probs=196.4
Q ss_pred hcCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeeccc---CCCHHHHHHHH---HHHhhcCCCceeeEE-------ee
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEF---DGSLESFHAEC---KVMGSIRHRNLVKII-------SS 825 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~---~~~~~~~~~e~---~~l~~l~hpniv~l~-------~~ 825 (1049)
.++|++.+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|+ +++++++|||||+++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 35688899999999999999995 579999999997542 33457889999 455556899999998 66
Q ss_pred eecCC-----------------eeEEEEeccCCCChhhhhhcCCC------ccCHHHHHHHHHHHHHHHHHhHccCCCCe
Q 039290 826 CSNND-----------------FKALVLEYMSNGSLEKCLYSDNY------FLDILQRLKIMIDVASALEYLHFGYSTPI 882 (1049)
Q Consensus 826 ~~~~~-----------------~~~lv~e~~~~g~L~~~l~~~~~------~~~~~~~~~i~~~i~~~l~~LH~~~~~~i 882 (1049)
+.+.+ ..++||||+ +|+|.+++...+. .+++..++.++.||++||+||| ++||
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH---hCCe
Confidence 65543 278999999 6799999876432 2335888899999999999999 9999
Q ss_pred EEcCCCCCCeeecCCCceEEecccCceecCCCccccccccccccCcccccccCCC-----------CcCcccchHHHHHH
Q 039290 883 VHCDIKPSNVLLNESMVGHLSDFGIAKILGKEESMRQTKTLGTIGYMAPEYGREG-----------KVSRKCDVYSYGIM 951 (1049)
Q Consensus 883 vH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----------~~~~~~DvwslG~i 951 (1049)
+||||||+|||++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||+
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~i 302 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV 302 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHH
Confidence 9999999999999999999999999986432 2234567 999999999877 89999999999999
Q ss_pred HHHHHhCCCCCCccccccchHHHhhhhccccCCcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHH
Q 039290 952 LMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKD 1031 (1049)
Q Consensus 952 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~e 1031 (1049)
+|||++|+.||......+.... +.. . ...++.++.+++.+||+.||++|||+.|
T Consensus 303 l~elltg~~Pf~~~~~~~~~~~--------------~~~-----~-------~~~~~~~~~~li~~~L~~dp~~Rpt~~e 356 (377)
T 3byv_A 303 IYWIWCADLPITKDAALGGSEW--------------IFR-----S-------CKNIPQPVRALLEGFLRYPKEDRLLPLQ 356 (377)
T ss_dssp HHHHHHSSCCC------CCSGG--------------GGS-----S-------CCCCCHHHHHHHHHHTCSSGGGCCCHHH
T ss_pred HHHHHHCCCCCcccccccchhh--------------hhh-----h-------ccCCCHHHHHHHHHHcCCCchhCCCHHH
Confidence 9999999999965322111100 000 0 0123567899999999999999999999
Q ss_pred HHHH--HHHHHHhhhh
Q 039290 1032 VANR--LVRIRETLSA 1045 (1049)
Q Consensus 1032 ll~~--L~~i~~~~~~ 1045 (1049)
++++ ++++.+..+.
T Consensus 357 ~l~hp~f~~~~~~~~~ 372 (377)
T 3byv_A 357 AMETPEYEQLRTELSA 372 (377)
T ss_dssp HHTSHHHHHHHHHHHH
T ss_pred HhhChHHHHHHHHHHH
Confidence 9974 6666665544
No 210
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.6e-37 Score=367.67 Aligned_cols=251 Identities=23% Similarity=0.314 Sum_probs=205.1
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeeccc--CCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEE
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEF--DGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVL 836 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 836 (1049)
.++|++.+.||+|+||+||+|+.. +++.||+|++.... ......+.+|++++++++||||+++++++.+.+..++||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 356999999999999999999965 78999999996543 345678999999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeec---CCCceEEecccCceecCC
Q 039290 837 EYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLN---ESMVGHLSDFGIAKILGK 913 (1049)
Q Consensus 837 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~---~~~~~kl~DfGla~~~~~ 913 (1049)
||+++|+|.+.+.... .+++.+++.++.|++.|++||| ++||+||||||+||+++ .++.+||+|||++.....
T Consensus 101 e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 176 (486)
T 3mwu_A 101 ELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (486)
T ss_dssp CCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCC
T ss_pred EcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCC
Confidence 9999999999887654 4899999999999999999999 99999999999999995 456899999999986644
Q ss_pred CccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhccccc
Q 039290 914 EESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANL 993 (1049)
Q Consensus 914 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1049)
.. ......||+.|+|||++.+ .++.++||||+||++|+|++|..||......+... .....
T Consensus 177 ~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~-~i~~~--------------- 237 (486)
T 3mwu_A 177 NT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILK-RVETG--------------- 237 (486)
T ss_dssp C------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH-HHHHT---------------
T ss_pred CC--ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHhC---------------
Confidence 32 2334578999999999875 69999999999999999999999997632222111 11000
Q ss_pred ccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 994 LNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 994 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
......+....++.++.+++.+||+.||++|||+.|+++|
T Consensus 238 --~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 238 --KYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp --CCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred --CCCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0000111223356778999999999999999999999987
No 211
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=2e-37 Score=342.28 Aligned_cols=252 Identities=28% Similarity=0.349 Sum_probs=201.4
Q ss_pred cCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEEecc
Q 039290 761 DGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVLEYM 839 (1049)
Q Consensus 761 ~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 839 (1049)
++|.....||+|+||.||+|+. .+++.||+|.+........+.+.+|+.+++.++||||+++++++.+.+..++||||+
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 101 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV 101 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence 3455667999999999999995 578899999998766666788999999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCC--ccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecC-CCceEEecccCceecCCCcc
Q 039290 840 SNGSLEKCLYSDNY--FLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNE-SMVGHLSDFGIAKILGKEES 916 (1049)
Q Consensus 840 ~~g~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~-~~~~kl~DfGla~~~~~~~~ 916 (1049)
++++|.+++..... ..++..++.++.|++.|++||| +.||+||||||+||+++. ++.+||+|||++........
T Consensus 102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~ 178 (295)
T 2clq_A 102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP 178 (295)
T ss_dssp SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHH---hCCEEccCCChhhEEEECCCCCEEEeecccccccCCCCC
Confidence 99999999976532 4678899999999999999999 999999999999999987 89999999999987643222
Q ss_pred ccccccccccCcccccccCCCC--cCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhcccccc
Q 039290 917 MRQTKTLGTIGYMAPEYGREGK--VSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLL 994 (1049)
Q Consensus 917 ~~~~~~~~~~~y~aPE~~~~~~--~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1049)
......|++.|+|||++.+.. ++.++||||+|+++|||++|+.||.............. ..
T Consensus 179 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~-~~--------------- 241 (295)
T 2clq_A 179 -CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVG-MF--------------- 241 (295)
T ss_dssp ---CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHH-HH---------------
T ss_pred -cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhc-cc---------------
Confidence 223456899999999986643 78999999999999999999999975322211111100 00
Q ss_pred cccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 995 NCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 995 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
......+..++.++.+++.+||+.||++|||++|++++
T Consensus 242 ---~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 242 ---KVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp ---CCCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred ---cccccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00011122345678999999999999999999999875
No 212
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=1.1e-37 Score=344.11 Aligned_cols=250 Identities=22% Similarity=0.296 Sum_probs=207.1
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccC---CCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEE
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFD---GSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALV 835 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 835 (1049)
.++|.+.+.||+|+||.||+|+.. +++.||+|++..... ...+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 357889999999999999999965 688999999876532 2346788999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCc
Q 039290 836 LEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEE 915 (1049)
Q Consensus 836 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~ 915 (1049)
|||+++++|.+++.... .+++.+++.++.|+++|++||| +.||+||||||+||+++.++.+||+|||++.......
T Consensus 94 ~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 169 (294)
T 2rku_A 94 LELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 169 (294)
T ss_dssp EECCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEcCCCCEEEEeccCceecccCc
Confidence 99999999999887644 4899999999999999999999 9999999999999999999999999999998765332
Q ss_pred cccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhccccccc
Q 039290 916 SMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLLN 995 (1049)
Q Consensus 916 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1049)
. ......+++.|+|||++.+..++.++||||+|+++|||++|+.||......+.. ......
T Consensus 170 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~-~~~~~~----------------- 230 (294)
T 2rku_A 170 E-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY-LRIKKN----------------- 230 (294)
T ss_dssp C-CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH-HHHHTT-----------------
T ss_pred c-ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHhhc-----------------
Confidence 2 223456899999999999888999999999999999999999999763322211 111000
Q ss_pred ccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 039290 996 CEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRL 1036 (1049)
Q Consensus 996 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L 1036 (1049)
....+...+..+.+++.+||+.||++|||++|++++-
T Consensus 231 ----~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~ 267 (294)
T 2rku_A 231 ----EYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDE 267 (294)
T ss_dssp ----CCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSH
T ss_pred ----cCCCccccCHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence 0011122446789999999999999999999999863
No 213
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=1.7e-37 Score=353.57 Aligned_cols=278 Identities=19% Similarity=0.246 Sum_probs=206.5
Q ss_pred cccHHHHHHHhcCCCCCceecCCCcEEEEEEEeCCCcEEEEEEeecccCCC-----------HHHHHHHHHHHhhcCCCc
Q 039290 750 RISYQDLLRATDGFSENKLLGMGSFGSVYKGVLPDGMEIAAKVFHMEFDGS-----------LESFHAECKVMGSIRHRN 818 (1049)
Q Consensus 750 ~~~~~~~~~~~~~~~~~~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~~~~-----------~~~~~~e~~~l~~l~hpn 818 (1049)
+...+++....++|++.+.||+|+||.||+|...+|+.||||++....... .+.+.+|++++++++|||
T Consensus 11 ~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 90 (362)
T 3pg1_A 11 RDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPN 90 (362)
T ss_dssp HHHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTT
T ss_pred HHHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcC
Confidence 345667888889999999999999999999998889999999986543221 267899999999999999
Q ss_pred eeeEEeeeec-----CCeeEEEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCee
Q 039290 819 LVKIISSCSN-----NDFKALVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVL 893 (1049)
Q Consensus 819 iv~l~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl 893 (1049)
|+++++++.. ....++||||++ |+|.+.+......+++..++.++.|++.||+||| +.||+||||||+||+
T Consensus 91 iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl 166 (362)
T 3pg1_A 91 ILGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPGNIL 166 (362)
T ss_dssp BCCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEE
T ss_pred ccceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCcCEecCCChHHEE
Confidence 9999999843 346899999997 5888888877777999999999999999999999 999999999999999
Q ss_pred ecCCCceEEecccCceecCCCccccccccccccCcccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCCccccccchH
Q 039290 894 LNESMVGHLSDFGIAKILGKEESMRQTKTLGTIGYMAPEYGRE-GKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSL 972 (1049)
Q Consensus 894 ~~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~ 972 (1049)
++.++.+||+|||++....... ......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||......+..
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~- 243 (362)
T 3pg1_A 167 LADNNDITICDFNLAREDTADA--NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQL- 243 (362)
T ss_dssp ECTTCCEEECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH-
T ss_pred EcCCCCEEEEecCccccccccc--ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHH-
Confidence 9999999999999997543322 2334568999999998876 67899999999999999999999999763322111
Q ss_pred HHhhhhccccCCcc-----------hhcccccccccccC-chhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 973 KRWVGDSLLSCSIT-----------EVADANLLNCEEND-FSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 973 ~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
..... ........ +............. .......++.+.+++.+|++.||++|||++|+++|
T Consensus 244 ~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 244 NKIVE-VVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHHHH-HHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHH-HcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 11100 00000000 00000010111111 11122345678999999999999999999999986
No 214
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=2.8e-37 Score=342.49 Aligned_cols=249 Identities=26% Similarity=0.370 Sum_probs=207.7
Q ss_pred cCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeeccc-CCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEEec
Q 039290 761 DGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEF-DGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVLEY 838 (1049)
Q Consensus 761 ~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 838 (1049)
+.|+..+.||+|+||.||+|+. .+++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 101 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 101 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence 4688899999999999999985 478999999997654 34567899999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCcccc
Q 039290 839 MSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEESMR 918 (1049)
Q Consensus 839 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~~~~ 918 (1049)
+++++|.+++... .+++.++..++.|++.|++||| +.||+||||||+||+++.++.+||+|||++........ .
T Consensus 102 ~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~ 175 (303)
T 3a7i_A 102 LGGGSALDLLEPG--PLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI-K 175 (303)
T ss_dssp CTTEEHHHHHTTS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC-C
T ss_pred CCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChheEEECCCCCEEEeecccceecCcccc-c
Confidence 9999999998753 4899999999999999999999 99999999999999999999999999999987644322 2
Q ss_pred ccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhcccccccccc
Q 039290 919 QTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLLNCEE 998 (1049)
Q Consensus 919 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 998 (1049)
.....+++.|+|||++.+..++.++||||+|+++|||++|+.||......+.. .......
T Consensus 176 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~--~~~~~~~------------------ 235 (303)
T 3a7i_A 176 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVL--FLIPKNN------------------ 235 (303)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH--HHHHHSC------------------
T ss_pred cCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHH--HHhhcCC------------------
Confidence 33456899999999999989999999999999999999999999753222111 1110000
Q ss_pred cCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 039290 999 NDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRL 1036 (1049)
Q Consensus 999 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L 1036 (1049)
....+..++..+.+++.+||+.||++|||++|++++.
T Consensus 236 -~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 272 (303)
T 3a7i_A 236 -PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHK 272 (303)
T ss_dssp -CCCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred -CCCCccccCHHHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence 0001122456789999999999999999999999874
No 215
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=7.9e-38 Score=343.53 Aligned_cols=250 Identities=23% Similarity=0.378 Sum_probs=205.6
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCceeeEEeeeec----------
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRNLVKIISSCSN---------- 828 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~---------- 828 (1049)
..+|++.+.||+|+||.||+|+.. +++.||+|+++... +.+.+|++++++++||||+++++++..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 85 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK 85 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence 346889999999999999999975 79999999997542 467789999999999999999998854
Q ss_pred ------CCeeEEEEeccCCCChhhhhhcC-CCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceE
Q 039290 829 ------NDFKALVLEYMSNGSLEKCLYSD-NYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGH 901 (1049)
Q Consensus 829 ------~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~k 901 (1049)
....++||||+++++|.+++... ...+++..++.++.|++.|++||| +.||+||||||+||+++.++.+|
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~k 162 (284)
T 2a19_B 86 NSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVK 162 (284)
T ss_dssp ---CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEE
T ss_pred cccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHEEEcCCCCEE
Confidence 44579999999999999999754 346899999999999999999999 99999999999999999999999
Q ss_pred EecccCceecCCCccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccc
Q 039290 902 LSDFGIAKILGKEESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLL 981 (1049)
Q Consensus 902 l~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 981 (1049)
|+|||++....... ......+++.|+|||++.+..++.++||||+|+++|||++|..|+.... .......
T Consensus 163 l~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~---~~~~~~~----- 232 (284)
T 2a19_B 163 IGDFGLVTSLKNDG--KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS---KFFTDLR----- 232 (284)
T ss_dssp ECCCTTCEESSCCS--CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH---HHHHHHH-----
T ss_pred ECcchhheeccccc--cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH---HHHHHhh-----
Confidence 99999998765433 2234568999999999988899999999999999999999998864311 0000000
Q ss_pred cCCcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhhh
Q 039290 982 SCSITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETLS 1044 (1049)
Q Consensus 982 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~~ 1044 (1049)
.... +..++..+.+++.+||+.||++|||+.|++++|+.+.+...
T Consensus 233 --------~~~~----------~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~ 277 (284)
T 2a19_B 233 --------DGII----------SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPE 277 (284)
T ss_dssp --------TTCC----------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred --------cccc----------cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCC
Confidence 0000 01234568899999999999999999999999998877654
No 216
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=2.2e-37 Score=367.06 Aligned_cols=250 Identities=25% Similarity=0.334 Sum_probs=201.1
Q ss_pred cCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeeccc--CCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEEe
Q 039290 761 DGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEF--DGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVLE 837 (1049)
Q Consensus 761 ~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 837 (1049)
++|++.+.||+|+||+||+|+.. ++..||+|+++... ......+.+|+++++.++||||+++++++.+.+..++|||
T Consensus 37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 116 (494)
T 3lij_A 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME 116 (494)
T ss_dssp HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence 46899999999999999999965 78899999997653 3346789999999999999999999999999999999999
Q ss_pred ccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecC---CCceEEecccCceecCCC
Q 039290 838 YMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNE---SMVGHLSDFGIAKILGKE 914 (1049)
Q Consensus 838 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~---~~~~kl~DfGla~~~~~~ 914 (1049)
|+++|+|.+.+.... .+++.+++.++.||++||+||| ++||+||||||+||+++. ++.+||+|||++......
T Consensus 117 ~~~~g~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~ 192 (494)
T 3lij_A 117 CYKGGELFDEIIHRM-KFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ 192 (494)
T ss_dssp CCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTT
T ss_pred cCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCC
Confidence 999999999887654 4899999999999999999999 999999999999999975 456999999999876543
Q ss_pred ccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhcccccc
Q 039290 915 ESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLL 994 (1049)
Q Consensus 915 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1049)
. ......||+.|+|||++. ..++.++||||+||++|+|++|..||......+.......+...
T Consensus 193 ~--~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~-------------- 255 (494)
T 3lij_A 193 K--KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYT-------------- 255 (494)
T ss_dssp B--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC--------------
T ss_pred c--cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC--------------
Confidence 3 234467999999999886 57999999999999999999999999764332221111100000
Q ss_pred cccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 995 NCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 995 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
...+.....+..+.+++.+||+.||++|||+.|+++|
T Consensus 256 ----~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 256 ----FDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp ----CCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred ----CCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 0011112345678999999999999999999999987
No 217
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=8.4e-38 Score=350.70 Aligned_cols=272 Identities=22% Similarity=0.285 Sum_probs=197.5
Q ss_pred HHhcCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeecccC--CCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEE
Q 039290 758 RATDGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEFD--GSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKAL 834 (1049)
Q Consensus 758 ~~~~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 834 (1049)
...++|++.+.||+|+||+||+|+. .+++.||+|+++.... ...+.+.+|++++++++||||+++++++.+.+..++
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 110 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL 110 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence 3456899999999999999999995 4788999999975532 234567899999999999999999999999999999
Q ss_pred EEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeec-----CCCceEEecccCce
Q 039290 835 VLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLN-----ESMVGHLSDFGIAK 909 (1049)
Q Consensus 835 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~-----~~~~~kl~DfGla~ 909 (1049)
||||+++ +|.+++..... +++.+++.++.|+++||+||| ++||+||||||+||+++ ..+.+||+|||+++
T Consensus 111 v~e~~~~-~L~~~~~~~~~-~~~~~~~~i~~ql~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~ 185 (329)
T 3gbz_A 111 IFEYAEN-DLKKYMDKNPD-VSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185 (329)
T ss_dssp EEECCSE-EHHHHHHHCTT-CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHH
T ss_pred EEecCCC-CHHHHHhhcCC-CCHHHHHHHHHHHHHHHHHHH---hCCEECCCCCHHHEEEecCCCCccceEEECcCCCcc
Confidence 9999975 99999877654 899999999999999999999 99999999999999994 55569999999998
Q ss_pred ecCCCccccccccccccCcccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhcc-ccCCcch
Q 039290 910 ILGKEESMRQTKTLGTIGYMAPEYGREG-KVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSL-LSCSITE 987 (1049)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~ 987 (1049)
....... ......+|+.|+|||++.+. .++.++||||+||++|||++|+.||......+........... .......
T Consensus 186 ~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (329)
T 3gbz_A 186 AFGIPIR-QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPG 264 (329)
T ss_dssp HHC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTT
T ss_pred ccCCccc-ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhh
Confidence 7643322 22345679999999998774 4899999999999999999999999764332221111110000 0000000
Q ss_pred hcc-----ccccccccc--CchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 988 VAD-----ANLLNCEEN--DFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 988 ~~~-----~~~~~~~~~--~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
... ......... +.......+.++.+++.+||+.||++|||++|+++|
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 265 VTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp GGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence 000 000000000 001112245778999999999999999999999875
No 218
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=3.5e-37 Score=366.27 Aligned_cols=251 Identities=25% Similarity=0.323 Sum_probs=203.9
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccC-------------CCHHHHHHHHHHHhhcCCCceeeEEee
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFD-------------GSLESFHAECKVMGSIRHRNLVKIISS 825 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~-------------~~~~~~~~e~~~l~~l~hpniv~l~~~ 825 (1049)
.++|++.++||+|+||+||+|+.. +++.||+|+++.... ...+.+.+|++++++++||||++++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 568999999999999999999964 688999999975431 335678999999999999999999999
Q ss_pred eecCCeeEEEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCC---ceEE
Q 039290 826 CSNNDFKALVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESM---VGHL 902 (1049)
Q Consensus 826 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~---~~kl 902 (1049)
+.+.+..++||||+++|+|.+++.... .+++..++.++.|++.||+||| +.||+||||||+||+++.++ .+||
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl 190 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKI 190 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESSTTCCSSEEE
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCcHHHEEEecCCCCccEEE
Confidence 999999999999999999999887654 4899999999999999999999 99999999999999998765 6999
Q ss_pred ecccCceecCCCccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhcccc
Q 039290 903 SDFGIAKILGKEESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLS 982 (1049)
Q Consensus 903 ~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 982 (1049)
+|||++....... ......||+.|+|||++. +.++.++||||+||++|+|++|..||......+.......
T Consensus 191 ~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~------ 261 (504)
T 3q5i_A 191 VDFGLSSFFSKDY--KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEK------ 261 (504)
T ss_dssp CCCTTCEECCTTS--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH------
T ss_pred EECCCCEEcCCCC--ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHc------
Confidence 9999998775433 234467899999999986 4699999999999999999999999976332221111100
Q ss_pred CCcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 983 CSITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 983 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
.............+.++.+++.+|++.||.+|||++|+++|
T Consensus 262 ------------~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 262 ------------GKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp ------------CCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ------------CCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 00000111223456789999999999999999999999986
No 219
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=1.5e-37 Score=376.87 Aligned_cols=252 Identities=27% Similarity=0.406 Sum_probs=203.4
Q ss_pred ceecCCCcEEEEEEEe---CCCcEEEEEEeecccC--CCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEEeccCC
Q 039290 767 KLLGMGSFGSVYKGVL---PDGMEIAAKVFHMEFD--GSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVLEYMSN 841 (1049)
Q Consensus 767 ~~lg~G~fg~Vy~a~~---~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 841 (1049)
+.||+|+||+||+|.+ ..++.||||+++.... ...+++.+|++++++++|||||++++++.+ +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 5799999999999964 3567899999976542 335789999999999999999999999975 457899999999
Q ss_pred CChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCcc--ccc
Q 039290 842 GSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEES--MRQ 919 (1049)
Q Consensus 842 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~~--~~~ 919 (1049)
|+|.+++...+ .+++.+++.++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++.+..... ...
T Consensus 454 g~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~yLH---~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 529 (635)
T 4fl3_A 454 GPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 529 (635)
T ss_dssp EEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC--------
T ss_pred CCHHHHHhhCC-CCCHHHHHHHHHHHHHHHHHHH---HCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccc
Confidence 99999997654 4899999999999999999999 99999999999999999999999999999987654332 122
Q ss_pred cccccccCcccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCCccccccchHHHhhhhccccCCcchhcccccccccc
Q 039290 920 TKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFT-KKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLLNCEE 998 (1049)
Q Consensus 920 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 998 (1049)
....+|+.|+|||++.+..++.++|||||||++|||++ |+.||......+.. ..+...
T Consensus 530 ~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~--~~i~~~------------------- 588 (635)
T 4fl3_A 530 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT--AMLEKG------------------- 588 (635)
T ss_dssp -----CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHH--HHHHTT-------------------
T ss_pred cCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHH--HHHHcC-------------------
Confidence 23446788999999998899999999999999999998 99999764332211 111000
Q ss_pred cCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhhh
Q 039290 999 NDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETLS 1044 (1049)
Q Consensus 999 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~~ 1044 (1049)
.+...+..++.++.++|.+||+.||++||+++++++.|+++...+.
T Consensus 589 ~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~l~ 634 (635)
T 4fl3_A 589 ERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV 634 (635)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHhc
Confidence 0111223466789999999999999999999999999999887654
No 220
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=1.1e-37 Score=350.81 Aligned_cols=249 Identities=22% Similarity=0.301 Sum_probs=206.8
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccC---CCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEE
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFD---GSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALV 835 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 835 (1049)
..+|.+.+.||+|+||.||+|+.. +++.||+|++..... ...+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 357889999999999999999965 678999999876532 2356788999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCc
Q 039290 836 LEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEE 915 (1049)
Q Consensus 836 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~ 915 (1049)
|||+++++|.+++.... .+++.+++.++.|+++||+||| ++||+||||||+||+++.++.+||+|||++.......
T Consensus 120 ~e~~~~~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 195 (335)
T 2owb_A 120 LELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 195 (335)
T ss_dssp ECCCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EecCCCCCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCCEecCCCchhEEEcCCCCEEEeeccCceecccCc
Confidence 99999999999887643 4899999999999999999999 9999999999999999999999999999998765332
Q ss_pred cccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhccccccc
Q 039290 916 SMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLLN 995 (1049)
Q Consensus 916 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 (1049)
. ......|++.|+|||++.+..++.++||||+|+++|||++|+.||......+.. ......
T Consensus 196 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~~~~~----------------- 256 (335)
T 2owb_A 196 E-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY-LRIKKN----------------- 256 (335)
T ss_dssp C-CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH-HHHHHT-----------------
T ss_pred c-cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHH-HHHhcC-----------------
Confidence 2 223456899999999998888999999999999999999999999753222111 111000
Q ss_pred ccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 996 CEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 996 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
....+..++..+.+++.+||+.||++|||++|++++
T Consensus 257 ----~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 257 ----EYSIPKHINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp ----CCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ----CCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 001112244678899999999999999999999986
No 221
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.3e-37 Score=348.81 Aligned_cols=260 Identities=21% Similarity=0.265 Sum_probs=206.4
Q ss_pred HHHHHHHhcCCCCC-ceecCCCcEEEEEEEeC-CCcEEEEEEeecccC--CCHHHHHHHHHHHhhcC-CCceeeEEeeee
Q 039290 753 YQDLLRATDGFSEN-KLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFD--GSLESFHAECKVMGSIR-HRNLVKIISSCS 827 (1049)
Q Consensus 753 ~~~~~~~~~~~~~~-~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~-hpniv~l~~~~~ 827 (1049)
++......++|.+. +.||+|+||.||+|+.. +++.||+|+++.... .....+.+|+.+++.++ ||||+++++++.
T Consensus 20 ~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~ 99 (327)
T 3lm5_A 20 FQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYE 99 (327)
T ss_dssp SBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEE
T ss_pred HHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEE
Confidence 33444455667777 89999999999999965 689999999976542 33678899999999994 699999999999
Q ss_pred cCCeeEEEEeccCCCChhhhhhcC-CCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecC---CCceEEe
Q 039290 828 NNDFKALVLEYMSNGSLEKCLYSD-NYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNE---SMVGHLS 903 (1049)
Q Consensus 828 ~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~---~~~~kl~ 903 (1049)
+.+..++||||+++|+|.+++... ...+++.+++.++.|++.||+||| ++||+||||||+||+++. ++.+||+
T Consensus 100 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH---~~givH~Dikp~NIl~~~~~~~~~~kL~ 176 (327)
T 3lm5_A 100 NTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIV 176 (327)
T ss_dssp CSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESCBTTBCCEEEC
T ss_pred eCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCChHHEEEecCCCCCcEEEe
Confidence 999999999999999999988653 346899999999999999999999 999999999999999987 7899999
Q ss_pred cccCceecCCCccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccC
Q 039290 904 DFGIAKILGKEESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSC 983 (1049)
Q Consensus 904 DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 983 (1049)
|||+++....... .....||+.|+|||++.+..++.++||||+||++|||++|+.||......+........ .
T Consensus 177 Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~--~--- 249 (327)
T 3lm5_A 177 DFGMSRKIGHACE--LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQV--N--- 249 (327)
T ss_dssp CGGGCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT--C---
T ss_pred eCccccccCCccc--cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhc--c---
Confidence 9999987654332 23457899999999999999999999999999999999999999763322221111000 0
Q ss_pred CcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 984 SITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 984 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
..........++..+.+++.+||+.||++|||++|++++
T Consensus 250 -------------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 250 -------------VDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp -------------CCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred -------------cccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 000011112345678999999999999999999999876
No 222
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=1.3e-37 Score=362.28 Aligned_cols=200 Identities=23% Similarity=0.371 Sum_probs=168.3
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccCC--CHHHHHHHHHHHhhcCCCceeeEEeeeecC-----Ce
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFDG--SLESFHAECKVMGSIRHRNLVKIISSCSNN-----DF 831 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~hpniv~l~~~~~~~-----~~ 831 (1049)
.++|++.+.||+|+||.||+|+.. +++.||||+++..... ..+++.+|++++++++||||+++++++... +.
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 467999999999999999999954 6889999999754322 346788999999999999999999998765 57
Q ss_pred eEEEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceec
Q 039290 832 KALVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKIL 911 (1049)
Q Consensus 832 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~ 911 (1049)
.|+||||++ |+|.+++.... .+++..++.++.||++||+||| +.||+||||||+||+++.++.+||+|||+|+..
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~~-~l~~~~~~~i~~qil~aL~~LH---~~givHrDlkp~NILl~~~~~~kL~DFGla~~~ 179 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTPI-FLTEEHIKTILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTI 179 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEecCC-cCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCHHHeEECCCCCEEEccCCCcccc
Confidence 899999996 59999987653 5899999999999999999999 999999999999999999999999999999876
Q ss_pred CCCcc---------------------ccccccccccCccccccc-CCCCcCcccchHHHHHHHHHHHhCCCCCCc
Q 039290 912 GKEES---------------------MRQTKTLGTIGYMAPEYG-REGKVSRKCDVYSYGIMLMETFTKKKPTDE 964 (1049)
Q Consensus 912 ~~~~~---------------------~~~~~~~~~~~y~aPE~~-~~~~~~~~~DvwslG~il~elltg~~p~~~ 964 (1049)
..... ......+||+.|+|||++ ....++.++||||+||++|||++|..||..
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~ 254 (432)
T 3n9x_A 180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHIN 254 (432)
T ss_dssp -------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCS
T ss_pred cccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccccc
Confidence 53321 123456789999999985 556799999999999999999997666543
No 223
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=5.8e-38 Score=358.31 Aligned_cols=263 Identities=14% Similarity=0.136 Sum_probs=189.8
Q ss_pred cCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccC---CCHHHHHHHHHHHhhc--CCCceeeEE-------eeee
Q 039290 761 DGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFD---GSLESFHAECKVMGSI--RHRNLVKII-------SSCS 827 (1049)
Q Consensus 761 ~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l--~hpniv~l~-------~~~~ 827 (1049)
..|+..+.||+|+||+||+|++. +++.||+|+++.... ...+.+.+|+++++.+ +||||++++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 34888999999999999999964 789999999987543 2345677785555444 699988855 3443
Q ss_pred cC-----------------CeeEEEEeccCCCChhhhhhcCCCccCHHHH------HHHHHHHHHHHHHhHccCCCCeEE
Q 039290 828 NN-----------------DFKALVLEYMSNGSLEKCLYSDNYFLDILQR------LKIMIDVASALEYLHFGYSTPIVH 884 (1049)
Q Consensus 828 ~~-----------------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~------~~i~~~i~~~l~~LH~~~~~~ivH 884 (1049)
.. ...++||||++ |+|.+++...+..+++..+ ..++.||++||+||| ++||+|
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH---~~~ivH 217 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQ---SKGLVH 217 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHH---HTTEEE
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHH---HCCCcc
Confidence 22 34799999998 7999999875444555666 788899999999999 999999
Q ss_pred cCCCCCCeeecCCCceEEecccCceecCCCccccccccccccCcccccccCC--CCcCcccchHHHHHHHHHHHhCCCCC
Q 039290 885 CDIKPSNVLLNESMVGHLSDFGIAKILGKEESMRQTKTLGTIGYMAPEYGRE--GKVSRKCDVYSYGIMLMETFTKKKPT 962 (1049)
Q Consensus 885 ~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslG~il~elltg~~p~ 962 (1049)
|||||+|||++.++.+||+|||+|+...... ....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||
T Consensus 218 rDikp~NIll~~~~~~kL~DFG~a~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf 293 (371)
T 3q60_A 218 GHFTPDNLFIMPDGRLMLGDVSALWKVGTRG----PASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPF 293 (371)
T ss_dssp TTCSGGGEEECTTSCEEECCGGGEEETTCEE----EGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCST
T ss_pred CcCCHHHEEECCCCCEEEEecceeeecCCCc----cCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCC
Confidence 9999999999999999999999998764322 13456799999999987 67999999999999999999999999
Q ss_pred CccccccchHHHhhhhccccCCcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH--HHHHH
Q 039290 963 DEIFAGEMSLKRWVGDSLLSCSITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR--LVRIR 1040 (1049)
Q Consensus 963 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~--L~~i~ 1040 (1049)
.......... |..... . ........+.....++..+.+++.+||+.||++|||++|+++| ++++.
T Consensus 294 ~~~~~~~~~~--~~~~~~-----~------~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~ 360 (371)
T 3q60_A 294 GLVTPGIKGS--WKRPSL-----R------VPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQLQ 360 (371)
T ss_dssp TBCCTTCTTC--CCBCCT-----T------SCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHHH
T ss_pred CCcCcccccc--hhhhhh-----h------hccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHHH
Confidence 8643221110 000000 0 0000011111122456789999999999999999999999875 55555
Q ss_pred Hhhh
Q 039290 1041 ETLS 1044 (1049)
Q Consensus 1041 ~~~~ 1044 (1049)
...+
T Consensus 361 ~~~~ 364 (371)
T 3q60_A 361 NEIS 364 (371)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 5444
No 224
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=6.7e-38 Score=345.40 Aligned_cols=258 Identities=23% Similarity=0.377 Sum_probs=199.6
Q ss_pred cCCCCCceecCCCcEEEEEEEeC--CCc--EEEEEEeeccc---CCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeE
Q 039290 761 DGFSENKLLGMGSFGSVYKGVLP--DGM--EIAAKVFHMEF---DGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKA 833 (1049)
Q Consensus 761 ~~~~~~~~lg~G~fg~Vy~a~~~--~~~--~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~ 833 (1049)
++|++.+.||+|+||+||+|++. +++ .||+|+++... ....+.+.+|++++++++||||+++++++.+.+ .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 47889999999999999999853 333 68999987543 233567899999999999999999999998765 78
Q ss_pred EEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCC
Q 039290 834 LVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGK 913 (1049)
Q Consensus 834 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~ 913 (1049)
+||||+++++|.+++......+++.+++.++.|+++|++||| +++|+||||||+||+++.++.+||+|||++.....
T Consensus 97 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 173 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 173 (291)
T ss_dssp EEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred eeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEEcCCCCEEEccccccccccc
Confidence 999999999999999876667899999999999999999999 99999999999999999999999999999987754
Q ss_pred Cccc--cccccccccCcccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCCccccccchHHHhhhhccccCCcchhcc
Q 039290 914 EESM--RQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFT-KKKPTDEIFAGEMSLKRWVGDSLLSCSITEVAD 990 (1049)
Q Consensus 914 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1049)
.... ......++..|+|||++.+..++.++||||+|+++|||++ |..||......+.. ..... ..
T Consensus 174 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~-~~~~~----~~------- 241 (291)
T 1u46_A 174 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQIL-HKIDK----EG------- 241 (291)
T ss_dssp -CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH-HHHHT----SC-------
T ss_pred cccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHH-HHHHc----cC-------
Confidence 3321 2223456778999999988889999999999999999999 99999764322111 11000 00
Q ss_pred cccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHh
Q 039290 991 ANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRET 1042 (1049)
Q Consensus 991 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~ 1042 (1049)
.....+..++.++.+++.+||+.||++|||+++++++|+++...
T Consensus 242 --------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 242 --------ERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp --------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred --------CCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence 00111223567899999999999999999999999999987654
No 225
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=2.4e-37 Score=338.11 Aligned_cols=248 Identities=24% Similarity=0.387 Sum_probs=198.4
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeeccc---CCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEE
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEF---DGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALV 835 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 835 (1049)
.++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 467999999999999999999975 79999999996542 34567889999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCc
Q 039290 836 LEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEE 915 (1049)
Q Consensus 836 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~ 915 (1049)
|||+++++|.+++.... .+++.+++.++.|+++|++||| +.||+||||||+||+++.++.+||+|||++.......
T Consensus 90 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 165 (276)
T 2h6d_A 90 MEYVSGGELFDYICKHG-RVEEMEARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165 (276)
T ss_dssp EECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--
T ss_pred EeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChhhEEECCCCCEEEeecccccccCCCc
Confidence 99999999999987654 4899999999999999999999 9999999999999999999999999999998764332
Q ss_pred cccccccccccCcccccccCCCCc-CcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhcccccc
Q 039290 916 SMRQTKTLGTIGYMAPEYGREGKV-SRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLL 994 (1049)
Q Consensus 916 ~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1049)
......+++.|+|||.+.+..+ +.++||||+|+++|+|++|..||......+. ...+...
T Consensus 166 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~--~~~~~~~--------------- 226 (276)
T 2h6d_A 166 --FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTL--FKKIRGG--------------- 226 (276)
T ss_dssp -------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHC---------------
T ss_pred --ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHH--HHHhhcC---------------
Confidence 1234568999999999987665 6899999999999999999999975322111 1111000
Q ss_pred cccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 995 NCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 995 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
....+..++..+.+++.+|++.||++|||++|++++
T Consensus 227 -----~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 227 -----VFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp -----CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred -----cccCchhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 000112245678999999999999999999999987
No 226
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=1.2e-37 Score=368.91 Aligned_cols=251 Identities=25% Similarity=0.373 Sum_probs=207.4
Q ss_pred cCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeeccc---CCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEE
Q 039290 761 DGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEF---DGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVL 836 (1049)
Q Consensus 761 ~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 836 (1049)
++|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 105 (484)
T 3nyv_A 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG 105 (484)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 46889999999999999999965 78999999996543 345678999999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeee---cCCCceEEecccCceecCC
Q 039290 837 EYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLL---NESMVGHLSDFGIAKILGK 913 (1049)
Q Consensus 837 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~---~~~~~~kl~DfGla~~~~~ 913 (1049)
||+.+|+|.+++.... .+++.+++.++.|++.||+||| ++||+||||||+||++ +.++.+||+|||++..+..
T Consensus 106 e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 181 (484)
T 3nyv_A 106 EVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 181 (484)
T ss_dssp CCCCSCBHHHHHHTCS-CCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC
T ss_pred ecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc
Confidence 9999999999887654 4899999999999999999999 9999999999999999 4678999999999987654
Q ss_pred CccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhccccc
Q 039290 914 EESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANL 993 (1049)
Q Consensus 914 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1049)
.. ......||+.|+|||++.+ .++.++||||+||++|+|++|..||......+. ...+...
T Consensus 182 ~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~--~~~i~~~-------------- 242 (484)
T 3nyv_A 182 SK--KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDI--LKKVEKG-------------- 242 (484)
T ss_dssp CC--SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHC--------------
T ss_pred cc--ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHH--HHHHHcC--------------
Confidence 33 2334578999999999865 799999999999999999999999976332221 1111100
Q ss_pred ccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 039290 994 LNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRL 1036 (1049)
Q Consensus 994 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L 1036 (1049)
......+....+++++.+++.+||+.||++|||++|+++|-
T Consensus 243 --~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~ 283 (484)
T 3nyv_A 243 --KYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHE 283 (484)
T ss_dssp --CCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSH
T ss_pred --CCCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhCh
Confidence 00001112234567789999999999999999999999873
No 227
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.2e-36 Score=360.07 Aligned_cols=348 Identities=23% Similarity=0.268 Sum_probs=206.2
Q ss_pred ceecccccccccccCCCCccccccceEEeccccccccCccccccccceEEEeeccccCCCccccccccccccceEEeccC
Q 039290 226 HVVSLAFNKFQGGIPRDIGNLTSVRNLFLGNNSLIGEIPNEIGNLRNLEVLGVQSSNLAGLIPASIFNISTLKELAVTDN 305 (1049)
Q Consensus 226 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N 305 (1049)
+.++.++++++ .+|..+. ++++.|+|++|++++..|..|.++++|++|+|++|++.+..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 14 RAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp TEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 45667777766 5665553 46777777777777666667777777777777777776666666666665555555555
Q ss_pred ccCCCCCCcccCCCCCccEEEcCCCCCCCCCCccccCCCCCceeecccCccccCcccccccccccceeecccccccCCCC
Q 039290 306 DLLGSLPSSIDLGLPNLERLFLGENNFSGTIPSSLTNISELSVLDFGFNSFSGLIPTTFGNLRSLKLLSLAGNVLTSPTP 385 (1049)
Q Consensus 306 ~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 385 (1049)
++. .+|...+..+++|++|+|++|++++..|..|..+++|++|++++|.+.+..+..|.++++|++|++++|.++.
T Consensus 91 ~l~-~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~--- 166 (477)
T 2id5_A 91 RLK-LIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTS--- 166 (477)
T ss_dssp CCC-SCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSS---
T ss_pred cCC-ccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcc---
Confidence 554 3333333344444444444444444444444444444444444444443333333333333333333322221
Q ss_pred CcccccccccCCCCcEEEccCCccccCCCCccccccccccEEEccCCccccCCCCCCCCCCCccEEEccCCcccccCCcc
Q 039290 386 DLSFLSSLTSCRNLEIIYLSENPINGILPSSIGNFSISMKSLSMESCNISGGIPKELGNINNLTVIRLGNNELTGTIPVT 465 (1049)
Q Consensus 386 ~~~~l~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 465 (1049)
..+..|.++++|+.|+|++|.+++..+..
T Consensus 167 ---------------------------------------------------~~~~~l~~l~~L~~L~l~~n~i~~~~~~~ 195 (477)
T 2id5_A 167 ---------------------------------------------------IPTEALSHLHGLIVLRLRHLNINAIRDYS 195 (477)
T ss_dssp ---------------------------------------------------CCHHHHTTCTTCCEEEEESCCCCEECTTC
T ss_pred ---------------------------------------------------cChhHhcccCCCcEEeCCCCcCcEeChhh
Confidence 12223455566777777777776666666
Q ss_pred ccCcCCCcceEeeccccCCCCCcccccccccceEEeeCcccCCcCchhccCcccCCceeecCcccccccCcccccccccc
Q 039290 466 LGRLQKLQGLYLQNNKLEGSIPEDLCHLYRLANLYLGDNKLSGRLPACLGNLTSLRDLSLGSNALTSIIPSTLWNLKDIL 545 (1049)
Q Consensus 466 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 545 (1049)
|..+++|++|++++|.+.+.+|.......+|++|++++|++++..+..+.++++|+.|+|++|+++++
T Consensus 196 ~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~------------ 263 (477)
T 2id5_A 196 FKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTI------------ 263 (477)
T ss_dssp SCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEE------------
T ss_pred cccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCcc------------
Confidence 66666666666666666555555555555566666666665543334555555555555555555544
Q ss_pred cccccCCccCCCCccCcCCCcceeEeecccccccccccccccCCCcccEEEeecccccCCccccccCccCCcEEeccCcc
Q 039290 546 RFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALSGVIPVTIGGLQGLQLLSLRYNRLQGPIPESFGGLKSLNFVDMSNNN 625 (1049)
Q Consensus 546 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 625 (1049)
.+..|..+++|++|+|++|++++..|..|.++++|+.|+|++|+|++..+..|..+++|++|+|++|+
T Consensus 264 ------------~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 331 (477)
T 2id5_A 264 ------------EGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNP 331 (477)
T ss_dssp ------------CTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSC
T ss_pred ------------ChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCC
Confidence 44445555666666666666666677778888888888888888887777778888888888888888
Q ss_pred ccCCcccccccccccceeeccCCcccccCCC
Q 039290 626 LSGTIPKSMEALSYLKHLNLSFNQLEGEIPT 656 (1049)
Q Consensus 626 l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~ 656 (1049)
+++.-+ ..+-...+..+++.++...|..|.
T Consensus 332 l~c~c~-~~~~~~~~~~~~~~~~~~~C~~p~ 361 (477)
T 2id5_A 332 LACDCR-LLWVFRRRWRLNFNRQQPTCATPE 361 (477)
T ss_dssp EECSGG-GHHHHTTTTSSCCTTCCCBEEESG
T ss_pred ccCccc-hHhHHhhhhccccCccCceeCCch
Confidence 875433 222233344566777777777765
No 228
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=1e-37 Score=350.49 Aligned_cols=270 Identities=24% Similarity=0.285 Sum_probs=202.0
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccCCC--HHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEE
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFDGS--LESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVL 836 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 836 (1049)
.++|++.+.||+|+||.||+|+.. +++.||+|++....... .+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 457899999999999999999965 58999999986554322 356789999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCcc
Q 039290 837 EYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEES 916 (1049)
Q Consensus 837 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~~ 916 (1049)
||+++++|.++..... .+++..++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||++........
T Consensus 104 e~~~~~~l~~~~~~~~-~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 179 (331)
T 4aaa_A 104 EFVDHTILDDLELFPN-GLDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 179 (331)
T ss_dssp ECCSEEHHHHHHHSTT-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred ecCCcchHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHH---HCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc
Confidence 9999998888765443 4899999999999999999999 99999999999999999999999999999986643322
Q ss_pred ccccccccccCcccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhc----------cccCCc
Q 039290 917 MRQTKTLGTIGYMAPEYGREG-KVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDS----------LLSCSI 985 (1049)
Q Consensus 917 ~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~----------~~~~~~ 985 (1049)
......+++.|+|||++.+. .++.++||||+||++|||++|+.||......+.......... ......
T Consensus 180 -~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (331)
T 4aaa_A 180 -VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVF 258 (331)
T ss_dssp -----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGG
T ss_pred -ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcccc
Confidence 22345689999999998765 789999999999999999999999976433222111100000 000000
Q ss_pred chhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 986 TEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 986 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
.....+.... ..........++.++.+++.+||+.||++|||++|++++
T Consensus 259 ~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 259 AGVRLPEIKE-REPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp TTCCCCCCSS-CCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ccccCccccc-cchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000000000 000011112456789999999999999999999999987
No 229
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.2e-37 Score=349.33 Aligned_cols=260 Identities=23% Similarity=0.404 Sum_probs=206.1
Q ss_pred hcCCCCCceecCCCcEEEEEEEe------CCCcEEEEEEeeccc-CCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCee
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVL------PDGMEIAAKVFHMEF-DGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFK 832 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~ 832 (1049)
.++|++.+.||+|+||.||+|++ .+++.||+|++.... .....++.+|+.++++++||||+++++++.+.+..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 35799999999999999999984 357789999996432 23356788999999999999999999999999999
Q ss_pred EEEEeccCCCChhhhhhcCC------CccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecC---CCceEEe
Q 039290 833 ALVLEYMSNGSLEKCLYSDN------YFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNE---SMVGHLS 903 (1049)
Q Consensus 833 ~lv~e~~~~g~L~~~l~~~~------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~---~~~~kl~ 903 (1049)
++||||+++++|.+++.... ..+++.+++.++.|+++||+||| +.||+||||||+||+++. +..+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeecCcCCHhHEEEecCCCcceEEEC
Confidence 99999999999999998654 35889999999999999999999 999999999999999984 4569999
Q ss_pred cccCceecCCCcc-ccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCCccccccchHHHhhhhccc
Q 039290 904 DFGIAKILGKEES-MRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFT-KKKPTDEIFAGEMSLKRWVGDSLL 981 (1049)
Q Consensus 904 DfGla~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 981 (1049)
|||++........ .......+++.|+|||++.+..++.++||||+||++|||++ |..||......+ ....+....
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~~~~~~~~- 262 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE--VLEFVTSGG- 262 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--HHHHHHTTC-
T ss_pred ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHH--HHHHHhcCC-
Confidence 9999975532221 12233567889999999988899999999999999999998 999987532221 111111000
Q ss_pred cCCcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhh
Q 039290 982 SCSITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETL 1043 (1049)
Q Consensus 982 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~ 1043 (1049)
....+..++..+.+++.+||+.||++|||++|++++|+.+...-
T Consensus 263 ------------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~ 306 (327)
T 2yfx_A 263 ------------------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 306 (327)
T ss_dssp ------------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred ------------------CCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence 00111234567899999999999999999999999999887643
No 230
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=4.6e-37 Score=338.50 Aligned_cols=247 Identities=23% Similarity=0.356 Sum_probs=199.0
Q ss_pred CCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeecccC--CCHHHHHHHHHHHhhcCCCceeeEEeeeec----CCeeEE
Q 039290 762 GFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEFD--GSLESFHAECKVMGSIRHRNLVKIISSCSN----NDFKAL 834 (1049)
Q Consensus 762 ~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~hpniv~l~~~~~~----~~~~~l 834 (1049)
.|++.+.||+|+||.||+|.. .++..||+|++..... ...+.+.+|++++++++||||+++++++.. ....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 367778999999999999996 4688999999875432 235678899999999999999999998865 456899
Q ss_pred EEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCC--eEEcCCCCCCeeec-CCCceEEecccCceec
Q 039290 835 VLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTP--IVHCDIKPSNVLLN-ESMVGHLSDFGIAKIL 911 (1049)
Q Consensus 835 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~Dlkp~NIl~~-~~~~~kl~DfGla~~~ 911 (1049)
||||+++++|.+++.... .+++..++.++.|+++|++||| +.+ |+||||||+||+++ .++.+||+|||++...
T Consensus 107 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~ 182 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp EEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred EEEecCCCCHHHHHHHcc-CCCHHHHHHHHHHHHHHHHHHH---cCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccc
Confidence 999999999999997643 4899999999999999999999 888 99999999999998 7899999999999754
Q ss_pred CCCccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhccc
Q 039290 912 GKEESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADA 991 (1049)
Q Consensus 912 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 991 (1049)
.... .....|++.|+|||++. +.++.++||||+||++|+|++|+.||..................
T Consensus 183 ~~~~---~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~----------- 247 (290)
T 1t4h_A 183 RASF---AKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVK----------- 247 (290)
T ss_dssp CTTS---BEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCC-----------
T ss_pred cccc---cccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCC-----------
Confidence 3322 23456899999999886 46899999999999999999999999763332222211111000
Q ss_pred ccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 992 NLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 992 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
....+...+.++.+++.+||+.||++|||++|+++|
T Consensus 248 --------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 248 --------PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp --------CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred --------ccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 001112234578999999999999999999999875
No 231
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=2.4e-37 Score=350.46 Aligned_cols=266 Identities=21% Similarity=0.269 Sum_probs=207.6
Q ss_pred hcCCCCCceecCCCcEEEEEEEeCCCcEEEEEEeecccCCC-----------------HHHHHHHHHHHhhcCCCceeeE
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLPDGMEIAAKVFHMEFDGS-----------------LESFHAECKVMGSIRHRNLVKI 822 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~~~~-----------------~~~~~~e~~~l~~l~hpniv~l 822 (1049)
.++|++.+.||+|+||.||+|+. +++.||+|++....... .+.+.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46899999999999999999999 99999999997653221 1789999999999999999999
Q ss_pred EeeeecCCeeEEEEeccCCCChhhh------hhcC-CCccCHHHHHHHHHHHHHHHHHhHccCC-CCeEEcCCCCCCeee
Q 039290 823 ISSCSNNDFKALVLEYMSNGSLEKC------LYSD-NYFLDILQRLKIMIDVASALEYLHFGYS-TPIVHCDIKPSNVLL 894 (1049)
Q Consensus 823 ~~~~~~~~~~~lv~e~~~~g~L~~~------l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~Dlkp~NIl~ 894 (1049)
++++.+.+..++||||+++++|.++ +... ...+++..++.++.|++.|++||| + .||+||||||+||++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dl~p~Nil~ 185 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIH---NEKNICHRDVKPSNILM 185 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTSCEECCCCCGGGEEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHh---ccCCEeecCCChHhEEE
Confidence 9999999999999999999999998 5542 456899999999999999999999 8 999999999999999
Q ss_pred cCCCceEEecccCceecCCCccccccccccccCcccccccCCC-CcCc-ccchHHHHHHHHHHHhCCCCCCccccccchH
Q 039290 895 NESMVGHLSDFGIAKILGKEESMRQTKTLGTIGYMAPEYGREG-KVSR-KCDVYSYGIMLMETFTKKKPTDEIFAGEMSL 972 (1049)
Q Consensus 895 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~-~~DvwslG~il~elltg~~p~~~~~~~~~~~ 972 (1049)
+.++.+||+|||.+...... ......+++.|+|||++.+. .++. ++||||+||++|||++|..||..........
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~ 262 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELF 262 (348)
T ss_dssp CTTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHH
T ss_pred cCCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHH
Confidence 99999999999999876433 23345689999999999876 5666 9999999999999999999997643322222
Q ss_pred HHhhhhccccCCcchhccccccccc-ccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 973 KRWVGDSLLSCSITEVADANLLNCE-ENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 973 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
........... ........... .........++.++.+++.+||+.||++|||++|++++
T Consensus 263 ~~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 263 NNIRTKNIEYP---LDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp HHHTSCCCCCC---CSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHhccCcCCc---cchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 22111110000 00000000000 00011113456789999999999999999999999985
No 232
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.2e-37 Score=349.05 Aligned_cols=256 Identities=22% Similarity=0.257 Sum_probs=190.5
Q ss_pred hcCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeecccCCCHHHHHHHHHHHhhcC-CCceeeEEeeee--------cC
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEFDGSLESFHAECKVMGSIR-HRNLVKIISSCS--------NN 829 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-hpniv~l~~~~~--------~~ 829 (1049)
..+|++.++||+|+||.||+|++ .+++.||+|++........+.+.+|+.+++++. ||||+++++++. ..
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 34789999999999999999996 478999999987655455677899999999996 999999999983 34
Q ss_pred CeeEEEEeccCCCChhhhhhc--CCCccCHHHHHHHHHHHHHHHHHhHccCCCC--eEEcCCCCCCeeecCCCceEEecc
Q 039290 830 DFKALVLEYMSNGSLEKCLYS--DNYFLDILQRLKIMIDVASALEYLHFGYSTP--IVHCDIKPSNVLLNESMVGHLSDF 905 (1049)
Q Consensus 830 ~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~Dlkp~NIl~~~~~~~kl~Df 905 (1049)
...++||||++ |+|.+++.. ....+++.+++.++.|++.||+||| +.+ |+||||||+||+++.++.+||+||
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~~~ivH~Dikp~NIl~~~~~~~kl~Df 182 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH---RQKPPIIHRDLKVENLLLSNQGTIKLCDF 182 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCCCCCGGGCEECTTSCEEBCCC
T ss_pred ceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCEEEccCCcccEEECCCCCEEEecC
Confidence 46799999996 699888865 3446899999999999999999999 888 999999999999999999999999
Q ss_pred cCceecCCCccc-----------cccccccccCccccccc---CCCCcCcccchHHHHHHHHHHHhCCCCCCccccccch
Q 039290 906 GIAKILGKEESM-----------RQTKTLGTIGYMAPEYG---REGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMS 971 (1049)
Q Consensus 906 Gla~~~~~~~~~-----------~~~~~~~~~~y~aPE~~---~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~ 971 (1049)
|+++........ ......+|+.|+|||++ .+..++.++||||+||++|||++|+.||.........
T Consensus 183 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~ 262 (337)
T 3ll6_A 183 GSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIV 262 (337)
T ss_dssp TTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---------
T ss_pred ccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHhh
Confidence 999876543221 11134589999999998 5667899999999999999999999999652211100
Q ss_pred HHHhhhhccccCCcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhh
Q 039290 972 LKRWVGDSLLSCSITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETL 1043 (1049)
Q Consensus 972 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~ 1043 (1049)
. .... .......+..+.+++.+||+.||++|||++|++++|+++....
T Consensus 263 -----~-------------~~~~------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~ 310 (337)
T 3ll6_A 263 -----N-------------GKYS------IPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAAR 310 (337)
T ss_dssp ---------------------CC------CCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred -----c-------------Cccc------CCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 0 0000 0000112334788999999999999999999999999988753
No 233
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=2.8e-37 Score=363.08 Aligned_cols=194 Identities=25% Similarity=0.389 Sum_probs=154.4
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccCC--CHHHHHHHHHHHhhcCCCceeeEEeeeec-----CCe
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFDG--SLESFHAECKVMGSIRHRNLVKIISSCSN-----NDF 831 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~hpniv~l~~~~~~-----~~~ 831 (1049)
.++|++.+.||+|+||+||+|+.. +++.||||++...... ..+++.+|++++++++||||+++++++.. .+.
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 467999999999999999999954 7899999999654322 34678899999999999999999999843 357
Q ss_pred eEEEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceec
Q 039290 832 KALVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKIL 911 (1049)
Q Consensus 832 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~ 911 (1049)
.|+||||++ ++|.+++.... .+++..++.++.||++||+||| +.||+||||||+|||++.++.+||+|||+|+..
T Consensus 132 ~~lv~e~~~-~~L~~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 206 (458)
T 3rp9_A 132 LYVVLEIAD-SDFKKLFRTPV-YLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTV 206 (458)
T ss_dssp EEEEECCCS-EEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred EEEEEeccc-cchhhhcccCC-CCCHHHHHHHHHHHHHHHHHHH---hCCcCCCCCChhhEEECCCCCEeecccccchhc
Confidence 899999984 68999887654 5899999999999999999999 999999999999999999999999999999876
Q ss_pred CCCcc--------------------------ccccccccccCccccccc-CCCCcCcccchHHHHHHHHHHHhC
Q 039290 912 GKEES--------------------------MRQTKTLGTIGYMAPEYG-REGKVSRKCDVYSYGIMLMETFTK 958 (1049)
Q Consensus 912 ~~~~~--------------------------~~~~~~~~~~~y~aPE~~-~~~~~~~~~DvwslG~il~elltg 958 (1049)
..... ......+||+.|+|||++ ....++.++||||+||++|||++|
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp TSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred cCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 43221 122345789999999976 456799999999999999999994
No 234
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=4.9e-37 Score=345.10 Aligned_cols=264 Identities=18% Similarity=0.248 Sum_probs=203.3
Q ss_pred hcCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeecccCCCHHHHHHHHHHHhhcC-CCceeeEEeeeec--CCeeEEE
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEFDGSLESFHAECKVMGSIR-HRNLVKIISSCSN--NDFKALV 835 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-hpniv~l~~~~~~--~~~~~lv 835 (1049)
.++|++.+.||+|+||+||+|+. .+++.||+|+++. ...+.+.+|++++++++ ||||+++++++.+ ....++|
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv 111 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP---VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV 111 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS---CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecc---cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence 46799999999999999999985 5789999999863 34578999999999997 9999999999987 6678999
Q ss_pred EeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCC-ceEEecccCceecCCC
Q 039290 836 LEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESM-VGHLSDFGIAKILGKE 914 (1049)
Q Consensus 836 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~-~~kl~DfGla~~~~~~ 914 (1049)
|||+++++|.+++.. +++.+++.++.|+++||+||| ++||+||||||+||+++.++ .+||+|||+++.....
T Consensus 112 ~e~~~~~~l~~~~~~----~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~ 184 (330)
T 3nsz_A 112 FEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 184 (330)
T ss_dssp EECCCCCCHHHHGGG----CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred EeccCchhHHHHHHh----CCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCC
Confidence 999999999998753 789999999999999999999 99999999999999999766 8999999999876543
Q ss_pred ccccccccccccCcccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhcc-------------
Q 039290 915 ESMRQTKTLGTIGYMAPEYGRE-GKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSL------------- 980 (1049)
Q Consensus 915 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~------------- 980 (1049)
.. .....+++.|+|||++.+ ..++.++||||+||++|||++|+.||..................
T Consensus 185 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 262 (330)
T 3nsz_A 185 QE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI 262 (330)
T ss_dssp CC--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTC
T ss_pred Cc--cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhcc
Confidence 32 234578999999999877 67899999999999999999999999543222111111110000
Q ss_pred -ccCCcchhcccccccccc--cCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 981 -LSCSITEVADANLLNCEE--NDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 981 -~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
......+........... .........+.++.+++.+||+.||++|||++|+++|
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 263 ELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp CCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred ccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 000000000000000000 0011122356789999999999999999999999986
No 235
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.2e-36 Score=355.91 Aligned_cols=264 Identities=19% Similarity=0.230 Sum_probs=212.6
Q ss_pred hcCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeecccCCCHHHHHHHHHHHhhcCC-CceeeEEeeeecCCeeEEEEe
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEFDGSLESFHAECKVMGSIRH-RNLVKIISSCSNNDFKALVLE 837 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h-pniv~l~~~~~~~~~~~lv~e 837 (1049)
.++|++.++||+|+||.||+|+. .+++.||||++..... ..++.+|+++++.++| +++..+..++.+.+..++|||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 46799999999999999999995 5789999998865432 3468899999999976 566667677788889999999
Q ss_pred ccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeee---cCCCceEEecccCceecCCC
Q 039290 838 YMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLL---NESMVGHLSDFGIAKILGKE 914 (1049)
Q Consensus 838 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~---~~~~~~kl~DfGla~~~~~~ 914 (1049)
|+ +++|.+++......+++.+++.|+.||+.||+||| +++|+||||||+|||+ +.++.+||+|||+++.+...
T Consensus 84 ~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (483)
T 3sv0_A 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDT 159 (483)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred CC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCC
Confidence 99 88999999876667999999999999999999999 9999999999999999 58899999999999876543
Q ss_pred ccc------cccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchH-HHhhhhccccCCcch
Q 039290 915 ESM------RQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSL-KRWVGDSLLSCSITE 987 (1049)
Q Consensus 915 ~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~ 987 (1049)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.......... ...+.
T Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~---------- 229 (483)
T 3sv0_A 160 STHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKIS---------- 229 (483)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHH----------
T ss_pred ccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHh----------
Confidence 321 1224678999999999999999999999999999999999999998744332211 11000
Q ss_pred hcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhhh
Q 039290 988 VADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETLS 1044 (1049)
Q Consensus 988 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~~ 1044 (1049)
..... .........++.++.+++.+||+.+|++||++++|++.|+++..+..
T Consensus 230 --~~~~~---~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~~ 281 (483)
T 3sv0_A 230 --EKKVA---TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIREG 281 (483)
T ss_dssp --HHHHH---SCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred --hcccc---ccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHcC
Confidence 00000 00001112356789999999999999999999999999999987653
No 236
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.1e-37 Score=350.85 Aligned_cols=263 Identities=22% Similarity=0.293 Sum_probs=197.4
Q ss_pred hcCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeecccCC--CHHHHHHHHHHHhhcCCCceeeEEeeeecCC------
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEFDG--SLESFHAECKVMGSIRHRNLVKIISSCSNND------ 830 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~------ 830 (1049)
.++|+..+.||+|+||.||+|+. .+|+.||+|++...... ..+++.+|++++++++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 46799999999999999999996 47999999999654332 2467889999999999999999999997653
Q ss_pred eeEEEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCcee
Q 039290 831 FKALVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKI 910 (1049)
Q Consensus 831 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~ 910 (1049)
..|+||||+ +++|.+++... .+++..+..++.|+++||+||| +.||+||||||+||+++.++.+||+|||+++.
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 177 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQ 177 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCHHHEEEcCCCCEEEEeeecccc
Confidence 469999999 78999998763 4899999999999999999999 99999999999999999999999999999987
Q ss_pred cCCCccccccccccccCcccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhc
Q 039290 911 LGKEESMRQTKTLGTIGYMAPEYGRE-GKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVA 989 (1049)
Q Consensus 911 ~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 989 (1049)
.... ....++|+.|+|||++.+ ..++.++||||+||++|||++|+.||.+....+. ...... ...... .+..
T Consensus 178 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-l~~i~~-~~g~~~-~~~~ 250 (367)
T 1cm8_A 178 ADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQ-LKEIMK-VTGTPP-AEFV 250 (367)
T ss_dssp CCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHH-HHCCCC-HHHH
T ss_pred cccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHH-hcCCCC-HHHH
Confidence 6432 234578999999998876 6799999999999999999999999975322211 111100 000000 0000
Q ss_pred c-----------cccccccccCc-hhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 990 D-----------ANLLNCEENDF-SAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 990 ~-----------~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
. ..+.......+ ......+..+.+++.+|++.||++|||++|+++|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 251 QRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp HTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 0 00000000011 1112346778999999999999999999999986
No 237
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=1.3e-37 Score=354.30 Aligned_cols=268 Identities=25% Similarity=0.308 Sum_probs=206.1
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccC-CCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEEe
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFD-GSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVLE 837 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 837 (1049)
.++|++.+.||+|+||+||+|+.. +++.||+|+++.... ...+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 356899999999999999999965 789999999976532 234678999999999999999999999999999999999
Q ss_pred ccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCC-CeEEcCCCCCCeeecCCCceEEecccCceecCCCcc
Q 039290 838 YMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYST-PIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEES 916 (1049)
Q Consensus 838 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~~ 916 (1049)
|+++++|.+++...+ .+++..+..++.|++.|++||| +. ||+||||||+||+++.++.+||+|||++......
T Consensus 112 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lh---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 185 (360)
T 3eqc_A 112 HMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 185 (360)
T ss_dssp CCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH--
T ss_pred CCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccc--
Confidence 999999999997654 4899999999999999999999 75 9999999999999999999999999999755322
Q ss_pred ccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhh---hc--------------
Q 039290 917 MRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVG---DS-------------- 979 (1049)
Q Consensus 917 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~---~~-------------- 979 (1049)
......||+.|+|||++.+..++.++||||+||++|||++|+.||......+........ ..
T Consensus 186 -~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (360)
T 3eqc_A 186 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPL 264 (360)
T ss_dssp -C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC---------------------
T ss_pred -cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcc
Confidence 123357899999999999999999999999999999999999999763322211110000 00
Q ss_pred -------cccCCcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 039290 980 -------LLSCSITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRL 1036 (1049)
Q Consensus 980 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L 1036 (1049)
.......+..+........ ......++.++.+++.+||+.||++|||++|+++|-
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 326 (360)
T 3eqc_A 265 NKFGMDSRPPMAIFELLDYIVNEPPP--KLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHA 326 (360)
T ss_dssp ---------CCCHHHHHHHHHHSCCC--CCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSH
T ss_pred cccccCCCCcccchhhhhHHhccCCC--CCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhCh
Confidence 0000000000000000000 000112456799999999999999999999999874
No 238
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=4.5e-37 Score=375.17 Aligned_cols=250 Identities=21% Similarity=0.273 Sum_probs=207.7
Q ss_pred HhcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecc---cCCCHHHHHHHHHHHhhc-CCCceeeEEeeeecCCeeE
Q 039290 759 ATDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHME---FDGSLESFHAECKVMGSI-RHRNLVKIISSCSNNDFKA 833 (1049)
Q Consensus 759 ~~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~~ 833 (1049)
..++|++.++||+|+||+||+|+.. +++.||||+++.. .....+.+..|.+++..+ +||+|+++++++.+.+..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 4568999999999999999999964 6889999999754 244567788999999987 7999999999999999999
Q ss_pred EEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCC
Q 039290 834 LVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGK 913 (1049)
Q Consensus 834 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~ 913 (1049)
+||||+++|+|.+++...+ .+++.+++.++.||+.||+||| ++||+||||||+|||++.++.+||+|||+|+....
T Consensus 419 lV~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 494 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 494 (674)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTSEECCCCCSTTEEECSSSCEEECCCTTCEECCC
T ss_pred EEEeCcCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEeccCChhhEEEcCCCcEEEeecceeecccc
Confidence 9999999999999998754 4899999999999999999999 99999999999999999999999999999986433
Q ss_pred CccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhccccc
Q 039290 914 EESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANL 993 (1049)
Q Consensus 914 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1049)
... ......||+.|+|||++.+..++.++||||+||++|||++|+.||......+..... . .
T Consensus 495 ~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i-~-------------~--- 556 (674)
T 3pfq_A 495 DGV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSI-M-------------E--- 556 (674)
T ss_dssp TTC-CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH-H-------------S---
T ss_pred CCc-ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHH-H-------------h---
Confidence 222 234567999999999999999999999999999999999999999763222111111 0 0
Q ss_pred ccccccCchhhHHHHHHHHHHHhhccccCCCCCCCH-----HHHHHH
Q 039290 994 LNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISM-----KDVANR 1035 (1049)
Q Consensus 994 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~-----~ell~~ 1035 (1049)
.....+...+.++.+++.+||+.||++||++ +|+++|
T Consensus 557 -----~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h 598 (674)
T 3pfq_A 557 -----HNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 598 (674)
T ss_dssp -----SCCCCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred -----CCCCCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence 0011122356778999999999999999997 777654
No 239
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=2.5e-37 Score=340.27 Aligned_cols=244 Identities=21% Similarity=0.297 Sum_probs=199.5
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccC--CCHHHHHHHHHHHhhc-CCCceeeEEeeeecCCeeEEE
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFD--GSLESFHAECKVMGSI-RHRNLVKIISSCSNNDFKALV 835 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~~lv 835 (1049)
.++|++.+.||+|+||+||+|+.. +++.||+|+++.... ....++.+|+..+..+ +||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 457899999999999999999965 799999999976532 2356788899999999 899999999999999999999
Q ss_pred EeccCCCChhhhhhcCC---CccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecC----------------
Q 039290 836 LEYMSNGSLEKCLYSDN---YFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNE---------------- 896 (1049)
Q Consensus 836 ~e~~~~g~L~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~---------------- 896 (1049)
|||+++++|.+++.... ..+++.+++.++.|+++||+||| ++||+||||||+||+++.
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC-----------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 99999999999987642 45899999999999999999999 999999999999999984
Q ss_pred ---CCceEEecccCceecCCCccccccccccccCcccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCCccccccchH
Q 039290 897 ---SMVGHLSDFGIAKILGKEESMRQTKTLGTIGYMAPEYGREG-KVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSL 972 (1049)
Q Consensus 897 ---~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~ 972 (1049)
...+||+|||.+....... ...+|+.|+|||++.+. .++.++||||+||++|||++|..|+... ...
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~----~~~ 237 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG----DQW 237 (289)
T ss_dssp ---CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS----HHH
T ss_pred cCCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch----hHH
Confidence 4489999999998765432 23589999999998765 5668999999999999999998776431 111
Q ss_pred HHhhhhccccCCcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 973 KRWVGDSLLSCSITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 973 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
....... . ...+..++.++.+++.+||+.||++|||++|+++|
T Consensus 238 ~~~~~~~-------------~-------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 238 HEIRQGR-------------L-------PRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp HHHHTTC-------------C-------CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred HHHHcCC-------------C-------CCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 1111100 0 00112245678999999999999999999999876
No 240
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=1.9e-37 Score=377.38 Aligned_cols=260 Identities=23% Similarity=0.380 Sum_probs=209.2
Q ss_pred HhcCCCCCceecCCCcEEEEEEEeC----CCcEEEEEEeecccC-CCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeE
Q 039290 759 ATDGFSENKLLGMGSFGSVYKGVLP----DGMEIAAKVFHMEFD-GSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKA 833 (1049)
Q Consensus 759 ~~~~~~~~~~lg~G~fg~Vy~a~~~----~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~ 833 (1049)
..++|++.+.||+|+||.||+|++. .+..||+|+++.... ...+.+.+|+.++++++||||+++++++.+ +..+
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~~ 466 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVW 466 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-CceE
Confidence 3467889999999999999999864 245799999865432 234678999999999999999999999854 5689
Q ss_pred EEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCC
Q 039290 834 LVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGK 913 (1049)
Q Consensus 834 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~ 913 (1049)
+||||+++|+|.+++...+..+++..++.++.|+++||+||| ++||+||||||+||+++.++.+||+|||+++....
T Consensus 467 lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~ 543 (656)
T 2j0j_A 467 IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 543 (656)
T ss_dssp EEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC
T ss_pred EEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchHhEEEeCCCCEEEEecCCCeecCC
Confidence 999999999999999877767999999999999999999999 99999999999999999999999999999987754
Q ss_pred CccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCCccccccchHHHhhhhccccCCcchhcccc
Q 039290 914 EESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFT-KKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADAN 992 (1049)
Q Consensus 914 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 992 (1049)
..........+++.|+|||++.+..++.++||||+||++|||++ |..||......+. ...+...
T Consensus 544 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~--~~~i~~~------------- 608 (656)
T 2j0j_A 544 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV--IGRIENG------------- 608 (656)
T ss_dssp ----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH--HHHHHHT-------------
T ss_pred CcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHH--HHHHHcC-------------
Confidence 44333334556789999999988899999999999999999997 9999976432221 1111000
Q ss_pred cccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhh
Q 039290 993 LLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETL 1043 (1049)
Q Consensus 993 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~ 1043 (1049)
.+...+..++..+.+++.+||+.||++|||++|+++.|+++.++.
T Consensus 609 ------~~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~~ 653 (656)
T 2j0j_A 609 ------ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 653 (656)
T ss_dssp ------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ------CCCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 011112345678999999999999999999999999999998754
No 241
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=4.8e-37 Score=350.36 Aligned_cols=264 Identities=19% Similarity=0.186 Sum_probs=195.4
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccC--CCHHHHHHHHHHHhhcCCCceeeEEeeeecCC------
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFD--GSLESFHAECKVMGSIRHRNLVKIISSCSNND------ 830 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~------ 830 (1049)
.++|++.+.||+|+||.||+|... +++.||||++..... ...+.+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 467999999999999999999954 788999999975432 23457889999999999999999999997654
Q ss_pred eeEEEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCcee
Q 039290 831 FKALVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKI 910 (1049)
Q Consensus 831 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~ 910 (1049)
..++||||+++ +|.+.+.. .+++.++..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++.
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred ceEEEEEcCCC-CHHHHHhh---ccCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 78999999975 78887753 3789999999999999999999 99999999999999999999999999999986
Q ss_pred cCCCccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhcccc--------
Q 039290 911 LGKEESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLS-------- 982 (1049)
Q Consensus 911 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~-------- 982 (1049)
..... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.+....+. ...........
T Consensus 177 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~ 253 (371)
T 2xrw_A 177 AGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ-WNKVIEQLGTPCPEFMKKL 253 (371)
T ss_dssp ---------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHC-CCCCCHHHHTTS
T ss_pred ccccc--ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCCHHHHHHh
Confidence 64322 23345789999999999998999999999999999999999999976322211 11110000000
Q ss_pred -----------CC-----cchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 039290 983 -----------CS-----ITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRL 1036 (1049)
Q Consensus 983 -----------~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L 1036 (1049)
.. ........ ............+.++.+++.+|++.||++|||++|+++|-
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 320 (371)
T 2xrw_A 254 QPTVRTYVENRPKYAGYSFEKLFPDV---LFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 320 (371)
T ss_dssp CHHHHHHHHSSCCCCCCCHHHHSCGG---GSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSH
T ss_pred hhHHHHHHhhCccccccchhhhcccc---cCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCc
Confidence 00 00000000 00111122344577899999999999999999999999874
No 242
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=5.4e-38 Score=343.89 Aligned_cols=253 Identities=22% Similarity=0.311 Sum_probs=202.7
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccC--CCHHHHHHHHHHHhhcCCCceeeEEeeee--cCCeeEE
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFD--GSLESFHAECKVMGSIRHRNLVKIISSCS--NNDFKAL 834 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~hpniv~l~~~~~--~~~~~~l 834 (1049)
.++|++.+.||+|+||.||+|+.. +++.||+|++..... ...+.+.+|++++++++||||+++++++. ..+..++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 457889999999999999999965 789999999975432 23467889999999999999999999874 4678899
Q ss_pred EEeccCCCChhhhhhcC---CCccCHHHHHHHHHHHHHHHHHhHccCCCC-----eEEcCCCCCCeeecCCCceEEeccc
Q 039290 835 VLEYMSNGSLEKCLYSD---NYFLDILQRLKIMIDVASALEYLHFGYSTP-----IVHCDIKPSNVLLNESMVGHLSDFG 906 (1049)
Q Consensus 835 v~e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~-----ivH~Dlkp~NIl~~~~~~~kl~DfG 906 (1049)
||||+++++|.+++... ...+++.+++.++.|++.|++||| +.+ |+||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH---RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHC------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHh---cccCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 99999999999998753 335899999999999999999999 777 9999999999999999999999999
Q ss_pred CceecCCCccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcc
Q 039290 907 IAKILGKEESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSIT 986 (1049)
Q Consensus 907 la~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 986 (1049)
.+........ ......+++.|+|||++.+..++.++||||+|+++|||++|+.||......+. ...+.. ..
T Consensus 162 ~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~~i~~----~~-- 232 (279)
T 2w5a_A 162 LARILNHDTS-FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL--AGKIRE----GK-- 232 (279)
T ss_dssp HHHHC---CH-HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHH----TC--
T ss_pred hheeeccccc-cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHH--HHHHhh----cc--
Confidence 9987643322 12235689999999999888899999999999999999999999976432211 111100 00
Q ss_pred hhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 039290 987 EVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLV 1037 (1049)
Q Consensus 987 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~ 1037 (1049)
. ...+..++.++.+++.+||+.||++|||++|+++++.
T Consensus 233 ------~-------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 233 ------F-------RRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp ------C-------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred ------c-------ccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 0 0111234567899999999999999999999998754
No 243
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=3e-37 Score=340.07 Aligned_cols=251 Identities=24% Similarity=0.278 Sum_probs=188.4
Q ss_pred hcCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeecccCC--CHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEE
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEFDG--SLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVL 836 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 836 (1049)
.++|++.+.||+|+||+||+|+. .+++.||+|+++..... ..+.+.++...++.++||||+++++++.+.+..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 45789999999999999999996 57899999999754321 2233445555678889999999999999999999999
Q ss_pred eccCCCChhhhhhc---CCCccCHHHHHHHHHHHHHHHHHhHccCCC-CeEEcCCCCCCeeecCCCceEEecccCceecC
Q 039290 837 EYMSNGSLEKCLYS---DNYFLDILQRLKIMIDVASALEYLHFGYST-PIVHCDIKPSNVLLNESMVGHLSDFGIAKILG 912 (1049)
Q Consensus 837 e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~ 912 (1049)
||+++ +|.+++.. ....+++..++.++.|++.|++||| ++ ||+||||||+||+++.++.+||+|||++....
T Consensus 86 e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 86 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp ECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHSCCCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred ehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 99975 88777654 4556999999999999999999999 87 99999999999999999999999999998764
Q ss_pred CCccccccccccccCccccccc----CCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchh
Q 039290 913 KEESMRQTKTLGTIGYMAPEYG----REGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEV 988 (1049)
Q Consensus 913 ~~~~~~~~~~~~~~~y~aPE~~----~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 988 (1049)
... ......||+.|+|||++ .+..++.++||||+||++|||++|+.||..................
T Consensus 162 ~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-------- 231 (290)
T 3fme_A 162 DDV--AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPS-------- 231 (290)
T ss_dssp ----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCC--------
T ss_pred ccc--cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCC--------
Confidence 432 22334689999999995 5567899999999999999999999999753322222222111100
Q ss_pred cccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 989 ADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 989 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
.. .....++.++.+++.+||+.||++|||++|+++|
T Consensus 232 -----~~------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~h 267 (290)
T 3fme_A 232 -----PQ------LPADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 267 (290)
T ss_dssp -----CC------CCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred -----CC------cccccCCHHHHHHHHHHhhcChhhCcCHHHHHhC
Confidence 00 0012245678999999999999999999999985
No 244
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=2e-37 Score=347.66 Aligned_cols=260 Identities=24% Similarity=0.318 Sum_probs=201.1
Q ss_pred ccHHHHHHHhcCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeecccCCCHHHHHHHHHHHhhc-CCCceeeEEeeeec
Q 039290 751 ISYQDLLRATDGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEFDGSLESFHAECKVMGSI-RHRNLVKIISSCSN 828 (1049)
Q Consensus 751 ~~~~~~~~~~~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~ 828 (1049)
+.+.++....++|++.+.||+|+||.||+|+. .+++.||+|++.... ...+.+.+|+.+++++ +||||+++++++..
T Consensus 14 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 92 (326)
T 2x7f_A 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIK 92 (326)
T ss_dssp --CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEE
T ss_pred ccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEee
Confidence 33444445677899999999999999999996 478999999997543 3457899999999999 79999999999876
Q ss_pred ------CCeeEEEEeccCCCChhhhhhcCC-CccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceE
Q 039290 829 ------NDFKALVLEYMSNGSLEKCLYSDN-YFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGH 901 (1049)
Q Consensus 829 ------~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~k 901 (1049)
.+..++||||+++++|.+++.... ..+++..++.++.|++.||+||| +.||+||||||+||+++.++.+|
T Consensus 93 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~k 169 (326)
T 2x7f_A 93 KNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVK 169 (326)
T ss_dssp CC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEE
T ss_pred ccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCcHHHEEEcCCCCEE
Confidence 467899999999999999997643 46899999999999999999999 99999999999999999999999
Q ss_pred EecccCceecCCCccccccccccccCcccccccC-----CCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhh
Q 039290 902 LSDFGIAKILGKEESMRQTKTLGTIGYMAPEYGR-----EGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWV 976 (1049)
Q Consensus 902 l~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~ 976 (1049)
|+|||++........ ......+++.|+|||++. +..++.++||||+||++|||++|..||......+... ...
T Consensus 170 l~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-~~~ 247 (326)
T 2x7f_A 170 LVDFGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF-LIP 247 (326)
T ss_dssp ECCCTTTC--------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-HHH
T ss_pred EeeCcCceecCcCcc-ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHH-Hhh
Confidence 999999987643221 223456899999999986 5678899999999999999999999996532221111 000
Q ss_pred hhccccCCcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 977 GDSLLSCSITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 977 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
. .. . +. .....++..+.+++.+||+.||++|||++|++++
T Consensus 248 ~-~~----~-----~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 248 R-NP----A-----PR---------LKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp H-SC----C-----CC---------CSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred c-Cc----c-----cc---------CCccccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0 00 0 00 0011235678999999999999999999999986
No 245
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=6.3e-37 Score=351.19 Aligned_cols=272 Identities=23% Similarity=0.266 Sum_probs=200.9
Q ss_pred HHhcCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCceeeEEeeeec--------
Q 039290 758 RATDGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRNLVKIISSCSN-------- 828 (1049)
Q Consensus 758 ~~~~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~-------- 828 (1049)
...++|++.+.||+|+||+||+|+. .+|+.||+|++..... ...+|+++++.++||||+++++++..
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 79 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKP 79 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC-------
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCcccccc
Confidence 3456899999999999999999995 5799999999865432 23479999999999999999999843
Q ss_pred ------------------------------CCeeEEEEeccCCCChhhhhhc---CCCccCHHHHHHHHHHHHHHHHHhH
Q 039290 829 ------------------------------NDFKALVLEYMSNGSLEKCLYS---DNYFLDILQRLKIMIDVASALEYLH 875 (1049)
Q Consensus 829 ------------------------------~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH 875 (1049)
....++||||+++ +|.+.+.. ....+++..++.++.|+++||+|||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH 158 (383)
T 3eb0_A 80 PQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH 158 (383)
T ss_dssp ------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3348899999985 87777653 3456899999999999999999999
Q ss_pred ccCCCCeEEcCCCCCCeeec-CCCceEEecccCceecCCCccccccccccccCcccccccCCC-CcCcccchHHHHHHHH
Q 039290 876 FGYSTPIVHCDIKPSNVLLN-ESMVGHLSDFGIAKILGKEESMRQTKTLGTIGYMAPEYGREG-KVSRKCDVYSYGIMLM 953 (1049)
Q Consensus 876 ~~~~~~ivH~Dlkp~NIl~~-~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~il~ 953 (1049)
+.||+||||||+||+++ .++.+||+|||+|+....... .....+|+.|+|||++.+. .++.++||||+||++|
T Consensus 159 ---~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ 233 (383)
T 3eb0_A 159 ---SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP--SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFG 233 (383)
T ss_dssp ---TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC--CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHH
T ss_pred ---HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC--CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHH
Confidence 99999999999999998 688999999999987654332 2345689999999988764 5899999999999999
Q ss_pred HHHhCCCCCCccccccchHHHhhhhccccCCcchhcc------c-ccccccccC--chhhHHHHHHHHHHHhhccccCCC
Q 039290 954 ETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVAD------A-NLLNCEEND--FSAREQCVSSIFSLAMDCTVDLPE 1024 (1049)
Q Consensus 954 elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~ 1024 (1049)
||++|+.||......+. ....+.. ...+....+.. . ......... ...+..++.++.+++.+||+.||+
T Consensus 234 ell~g~~pf~~~~~~~~-~~~i~~~-~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 311 (383)
T 3eb0_A 234 ELILGKPLFSGETSIDQ-LVRIIQI-MGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPD 311 (383)
T ss_dssp HHHHSSCSSCCSSHHHH-HHHHHHH-HCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGG
T ss_pred HHHhCCCCCCCCChHHH-HHHHHHH-hCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChh
Confidence 99999999976432221 1111110 00000000000 0 000000000 011223567799999999999999
Q ss_pred CCCCHHHHHHH--HHHHHH
Q 039290 1025 KRISMKDVANR--LVRIRE 1041 (1049)
Q Consensus 1025 ~Rpt~~ell~~--L~~i~~ 1041 (1049)
+|||+.|+++| +++++.
T Consensus 312 ~R~t~~e~l~hp~f~~~~~ 330 (383)
T 3eb0_A 312 LRINPYEAMAHPFFDHLRN 330 (383)
T ss_dssp GSCCHHHHHTSGGGHHHHH
T ss_pred hCCCHHHHhcCHHHHHHHh
Confidence 99999999976 555443
No 246
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=6.2e-37 Score=339.13 Aligned_cols=271 Identities=23% Similarity=0.294 Sum_probs=204.1
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeeccc--CCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEE
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEF--DGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVL 836 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 836 (1049)
.++|+..+.||+|+||.||+|+.. +++.||+|+++... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (299)
T 2r3i_A 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF 81 (299)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEE
Confidence 357889999999999999999965 78999999987543 233577889999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCC-CccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCc
Q 039290 837 EYMSNGSLEKCLYSDN-YFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEE 915 (1049)
Q Consensus 837 e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~ 915 (1049)
||++ ++|.+++.... ..+++..++.++.|+++|++||| +.||+||||||+||+++.++.+||+|||.+.......
T Consensus 82 e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~ 157 (299)
T 2r3i_A 82 EFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 157 (299)
T ss_dssp ECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS
T ss_pred Eccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc
Confidence 9997 59999887653 45889999999999999999999 9999999999999999999999999999998764332
Q ss_pred cccccccccccCcccccccCCCC-cCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccC-Ccchh-----
Q 039290 916 SMRQTKTLGTIGYMAPEYGREGK-VSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSC-SITEV----- 988 (1049)
Q Consensus 916 ~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~----- 988 (1049)
. ......+++.|+|||++.+.. ++.++||||+||++|||++|+.||......+.............. .....
T Consensus 158 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (299)
T 2r3i_A 158 R-TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 236 (299)
T ss_dssp B-CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred c-ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCcc
Confidence 2 223356799999999987755 789999999999999999999999764332221111110000000 00000
Q ss_pred cccccccccccCc-hhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 989 ADANLLNCEENDF-SAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 989 ~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
............. ......+.++.+++.+|++.||++|||++|+++|
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~h 284 (299)
T 2r3i_A 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 284 (299)
T ss_dssp CCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0000000000000 1112345788999999999999999999999985
No 247
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=4.1e-37 Score=355.32 Aligned_cols=266 Identities=21% Similarity=0.252 Sum_probs=202.1
Q ss_pred hcCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeecccCCCHHHHHHHHHHHhhcC--------CCceeeEEeeee---
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEFDGSLESFHAECKVMGSIR--------HRNLVKIISSCS--- 827 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~--------hpniv~l~~~~~--- 827 (1049)
.++|++.+.||+|+||+||+|+. .+++.||+|+++.. ....+.+.+|++++++++ ||||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 36799999999999999999985 47889999999743 223567889999999985 788999999987
Q ss_pred -cCCeeEEEEeccCCCChhhhhhc-CCCccCHHHHHHHHHHHHHHHHHhHccCCC-CeEEcCCCCCCeeecCCC------
Q 039290 828 -NNDFKALVLEYMSNGSLEKCLYS-DNYFLDILQRLKIMIDVASALEYLHFGYST-PIVHCDIKPSNVLLNESM------ 898 (1049)
Q Consensus 828 -~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~Dlkp~NIl~~~~~------ 898 (1049)
+....++||||+. +++.+.+.. ....+++..++.++.||+.||+||| ++ ||+||||||+|||++.++
T Consensus 115 ~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~givHrDikp~NIll~~~~~~~~~~ 190 (397)
T 1wak_A 115 VNGTHICMVFEVLG-HHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLH---TKCRIIHTDIKPENILLSVNEQYIRRL 190 (397)
T ss_dssp TTEEEEEEEECCCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECCCCSGGGEEECCCHHHHHHH
T ss_pred CCCceEEEEEeccC-ccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHeeEeccchhhhhh
Confidence 5668899999995 566555544 3456899999999999999999999 88 999999999999998765
Q ss_pred -------------------------------------------ceEEecccCceecCCCccccccccccccCcccccccC
Q 039290 899 -------------------------------------------VGHLSDFGIAKILGKEESMRQTKTLGTIGYMAPEYGR 935 (1049)
Q Consensus 899 -------------------------------------------~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~ 935 (1049)
.+||+|||++...... .....||+.|+|||++.
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~aPE~~~ 266 (397)
T 1wak_A 191 AAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYRSLEVLI 266 (397)
T ss_dssp HHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGCCHHHHH
T ss_pred hhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCcccCChhhc
Confidence 8999999999876432 23457899999999999
Q ss_pred CCCcCcccchHHHHHHHHHHHhCCCCCCccccccch-----HHHhhhhccccCCc---------chhccc----------
Q 039290 936 EGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMS-----LKRWVGDSLLSCSI---------TEVADA---------- 991 (1049)
Q Consensus 936 ~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~-----~~~~~~~~~~~~~~---------~~~~~~---------- 991 (1049)
+..++.++||||+||++|||++|+.||......+.. ...... ....... .+....
T Consensus 267 ~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (397)
T 1wak_A 267 GSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIE-LLGKVPRKLIVAGKYSKEFFTKKGDLKHITKL 345 (397)
T ss_dssp TSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHH-HHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCC
T ss_pred CCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHH-hcCCCChHHhhcccccccccCCcccccccccc
Confidence 989999999999999999999999999764332211 000000 0000000 000000
Q ss_pred ---ccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 992 ---NLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 992 ---~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
............+...+..+.+++.+||+.||++|||++|+++|
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 346 KPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp CCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred CCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 00000011122345677889999999999999999999999975
No 248
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=6.9e-37 Score=338.54 Aligned_cols=253 Identities=23% Similarity=0.307 Sum_probs=205.3
Q ss_pred HhcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccC---------CCHHHHHHHHHHHhhcC-CCceeeEEeeee
Q 039290 759 ATDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFD---------GSLESFHAECKVMGSIR-HRNLVKIISSCS 827 (1049)
Q Consensus 759 ~~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~---------~~~~~~~~e~~~l~~l~-hpniv~l~~~~~ 827 (1049)
..++|++.+.||+|+||.||+|+.. +++.||+|+++.... ...+.+.+|+++++++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 3568999999999999999999965 788999999975431 12356788999999995 999999999999
Q ss_pred cCCeeEEEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccC
Q 039290 828 NNDFKALVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGI 907 (1049)
Q Consensus 828 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGl 907 (1049)
+.+..++||||+++++|.+++.... .+++.+++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||+
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~ 170 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTEKV-TLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGF 170 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred cCCeEEEEEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEcCCCcEEEecccc
Confidence 9999999999999999999987643 4899999999999999999999 99999999999999999999999999999
Q ss_pred ceecCCCccccccccccccCcccccccC------CCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccc
Q 039290 908 AKILGKEESMRQTKTLGTIGYMAPEYGR------EGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLL 981 (1049)
Q Consensus 908 a~~~~~~~~~~~~~~~~~~~y~aPE~~~------~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 981 (1049)
+........ .....+++.|+|||++. ...++.++||||+|+++|||++|..||......+.. .......
T Consensus 171 ~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~-~~~~~~~-- 245 (298)
T 1phk_A 171 SCQLDPGEK--LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLML-RMIMSGN-- 245 (298)
T ss_dssp CEECCTTCC--BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-HHHHHTC--
T ss_pred hhhcCCCcc--cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHH-HHHhcCC--
Confidence 987654332 23456899999999874 456889999999999999999999999753221111 1100000
Q ss_pred cCCcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 982 SCSITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 982 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
.....+....++.++.+++.+||+.||++|||++|++++
T Consensus 246 ---------------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (298)
T 1phk_A 246 ---------------YQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 284 (298)
T ss_dssp ---------------CCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred ---------------cccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhC
Confidence 000011112356779999999999999999999999875
No 249
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=8e-37 Score=341.92 Aligned_cols=252 Identities=23% Similarity=0.296 Sum_probs=198.8
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccC--------CCHHHHHHHHHHHhhcCCCceeeEEeeeecCC
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFD--------GSLESFHAECKVMGSIRHRNLVKIISSCSNND 830 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~ 830 (1049)
.++|++.+.||+|+||.||+|+.. +++.||||++..... .....+.+|++++++++||||+++++++...+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 457999999999999999999964 688999999865321 12345889999999999999999999987765
Q ss_pred eeEEEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCC---ceEEecccC
Q 039290 831 FKALVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESM---VGHLSDFGI 907 (1049)
Q Consensus 831 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~---~~kl~DfGl 907 (1049)
.++||||+++++|.+++.... .+++.+++.++.|+++||+||| ++||+||||||+||+++.++ .+||+|||+
T Consensus 89 -~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~ 163 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGH 163 (322)
T ss_dssp -EEEEEECCTTEETHHHHSTTC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSSSCCEEECCCTT
T ss_pred -eEEEEecCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEecCCCCCeEEEccCcc
Confidence 799999999999999887654 5899999999999999999999 99999999999999998655 499999999
Q ss_pred ceecCCCccccccccccccCcccccccC---CCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCC
Q 039290 908 AKILGKEESMRQTKTLGTIGYMAPEYGR---EGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCS 984 (1049)
Q Consensus 908 a~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 984 (1049)
+....... ......|++.|+|||++. ...++.++||||+||++|||++|..||..................
T Consensus 164 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~---- 237 (322)
T 2ycf_A 164 SKILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKY---- 237 (322)
T ss_dssp CEECCCCH--HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCC----
T ss_pred ceeccccc--ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCcc----
Confidence 98765432 123356899999999863 567899999999999999999999999764332221111110000
Q ss_pred cchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 985 ITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 985 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
.........++.++.+++.+||+.||++|||++|++++
T Consensus 238 -------------~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h 275 (322)
T 2ycf_A 238 -------------NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 275 (322)
T ss_dssp -------------CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred -------------ccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence 00011122356789999999999999999999999865
No 250
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1.8e-37 Score=344.12 Aligned_cols=262 Identities=25% Similarity=0.327 Sum_probs=188.6
Q ss_pred HhcCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeeccc-CCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEE
Q 039290 759 ATDGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEF-DGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVL 836 (1049)
Q Consensus 759 ~~~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 836 (1049)
..++|++.+.||+|+||.||+|.. .+++.||+|++.... ....+++.+|++++++++||||+++++++...+..++||
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM 92 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEE
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEe
Confidence 356899999999999999999995 478999999986543 334567889999999999999999999999999999999
Q ss_pred eccCCCChhhhhhc-------CCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCce
Q 039290 837 EYMSNGSLEKCLYS-------DNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAK 909 (1049)
Q Consensus 837 e~~~~g~L~~~l~~-------~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~ 909 (1049)
||+++++|.+++.. ....+++..++.++.|+++|++||| +.||+||||||+||+++.++.+||+|||++.
T Consensus 93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 169 (303)
T 2vwi_A 93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSA 169 (303)
T ss_dssp ECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCHHHH
T ss_pred hhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCCChhhEEEcCCCCEEEEeccchh
Confidence 99999999999864 2345899999999999999999999 9999999999999999999999999999997
Q ss_pred ecCCCcc----ccccccccccCcccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCC
Q 039290 910 ILGKEES----MRQTKTLGTIGYMAPEYGRE-GKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCS 984 (1049)
Q Consensus 910 ~~~~~~~----~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 984 (1049)
....... .......+++.|+|||++.+ ..++.++||||+||++|||++|+.||......+........... ..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~--~~ 247 (303)
T 2vwi_A 170 FLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPP--SL 247 (303)
T ss_dssp HCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCC--CT
T ss_pred eeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCC--cc
Confidence 6643221 11233568999999998865 56899999999999999999999999764333222111111000 00
Q ss_pred cchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 985 ITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 985 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
.....+ ......++.++.+++.+||+.||++|||++|++++
T Consensus 248 ~~~~~~----------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 248 ETGVQD----------KEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp TC---------------CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred cccccc----------chhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 000000 00112245678999999999999999999999985
No 251
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=6.6e-37 Score=345.48 Aligned_cols=252 Identities=24% Similarity=0.293 Sum_probs=200.2
Q ss_pred HhcCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeecccCC-CHHHHHHHHHH-HhhcCCCceeeEEeeeecCCeeEEE
Q 039290 759 ATDGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEFDG-SLESFHAECKV-MGSIRHRNLVKIISSCSNNDFKALV 835 (1049)
Q Consensus 759 ~~~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~~~-~~~~~~~e~~~-l~~l~hpniv~l~~~~~~~~~~~lv 835 (1049)
..++|+..+.||+|+||.||+|+. .+|+.||||+++..... ...++..|..+ ++.++||||+++++++.+.+..++|
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 128 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 128 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEE
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEE
Confidence 356788899999999999999995 57899999999765322 23455556555 7778999999999999999999999
Q ss_pred EeccCCCChhhhhhc---CCCccCHHHHHHHHHHHHHHHHHhHccCCC-CeEEcCCCCCCeeecCCCceEEecccCceec
Q 039290 836 LEYMSNGSLEKCLYS---DNYFLDILQRLKIMIDVASALEYLHFGYST-PIVHCDIKPSNVLLNESMVGHLSDFGIAKIL 911 (1049)
Q Consensus 836 ~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~ 911 (1049)
|||+++ +|.+++.. ....+++..++.++.||++||+||| ++ ||+||||||+||+++.++.+||+|||++...
T Consensus 129 ~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 204 (340)
T 3an0_A 129 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL 204 (340)
T ss_dssp ECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCSCCSTTEEECSTTCEEECCCSHHHHH
T ss_pred HHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeeCCCceec
Confidence 999976 99888764 4557999999999999999999999 86 9999999999999999999999999999876
Q ss_pred CCCccccccccccccCcccccccC----CCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcch
Q 039290 912 GKEESMRQTKTLGTIGYMAPEYGR----EGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITE 987 (1049)
Q Consensus 912 ~~~~~~~~~~~~~~~~y~aPE~~~----~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 987 (1049)
.... ......||+.|+|||++. ...++.++||||+||++|||++|+.||..................
T Consensus 205 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~------- 275 (340)
T 3an0_A 205 VDSV--AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPS------- 275 (340)
T ss_dssp SCHH--HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCC-------
T ss_pred cccc--ccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHhcCCC-------
Confidence 4322 223356899999999864 347899999999999999999999999753222111111111000
Q ss_pred hcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 988 VADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 988 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
. ......++.++.+++.+||+.||++|||+.|++++
T Consensus 276 ------~------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 276 ------P------QLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp ------C------CCCGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred ------C------CCCcccCCHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 0 00012245679999999999999999999999986
No 252
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=5.9e-37 Score=355.81 Aligned_cols=197 Identities=21% Similarity=0.272 Sum_probs=171.3
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccCCCHHHHHHHHHHHhhc------CCCceeeEEeeeecCCee
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFDGSLESFHAECKVMGSI------RHRNLVKIISSCSNNDFK 832 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l------~hpniv~l~~~~~~~~~~ 832 (1049)
..+|++.+.||+|+||+||+|+.. +++.||||+++... .....+.+|+++++.+ .|+||+++++++...+..
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 357999999999999999999854 68899999997532 2345677888888877 577999999999999999
Q ss_pred EEEEeccCCCChhhhhhcCC-CccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCc--eEEecccCce
Q 039290 833 ALVLEYMSNGSLEKCLYSDN-YFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMV--GHLSDFGIAK 909 (1049)
Q Consensus 833 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~--~kl~DfGla~ 909 (1049)
++||||+. ++|.+++.... ..+++..++.++.||+.||+||| +.+|+||||||+||+++.++. +||+|||+++
T Consensus 175 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~ 250 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250 (429)
T ss_dssp EEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HHTEECSCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEccCCCcceEEeecccce
Confidence 99999996 58999887654 35899999999999999999999 899999999999999998887 9999999998
Q ss_pred ecCCCccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCcc
Q 039290 910 ILGKEESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEI 965 (1049)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~ 965 (1049)
..... .....+|+.|+|||++.+..++.++||||+||++|||++|..||...
T Consensus 251 ~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 251 YEHQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp ETTCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ecCCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 65432 23457899999999999999999999999999999999999999764
No 253
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=1.6e-36 Score=336.85 Aligned_cols=251 Identities=23% Similarity=0.325 Sum_probs=199.5
Q ss_pred hcCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeeccc----CCCHHHHHHHHHHHhhcCCCceeeEEeee--ecCCee
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEF----DGSLESFHAECKVMGSIRHRNLVKIISSC--SNNDFK 832 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~hpniv~l~~~~--~~~~~~ 832 (1049)
.++|++.+.||+|+||.||+|.. .+++.||+|+++... ....+.+.+|++++++++||||+++++++ .+.+..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 46899999999999999999996 478899999997542 33457899999999999999999999998 445688
Q ss_pred EEEEeccCCCChhhhhhc-CCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceec
Q 039290 833 ALVLEYMSNGSLEKCLYS-DNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKIL 911 (1049)
Q Consensus 833 ~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~ 911 (1049)
++||||++++ +.+++.. ....+++.+++.++.|+++|++||| ++||+||||||+||+++.++.+||+|||++...
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~ 159 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEAL 159 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEcCCCcEEeecccccccc
Confidence 9999999876 7666654 3446899999999999999999999 999999999999999999999999999999876
Q ss_pred CCCc-cccccccccccCcccccccCCCC--cCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchh
Q 039290 912 GKEE-SMRQTKTLGTIGYMAPEYGREGK--VSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEV 988 (1049)
Q Consensus 912 ~~~~-~~~~~~~~~~~~y~aPE~~~~~~--~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 988 (1049)
.... ........+++.|+|||++.+.. ++.++||||+|+++|||++|+.||......+ .......
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~i~~---------- 227 (305)
T 2wtk_C 160 HPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYK--LFENIGK---------- 227 (305)
T ss_dssp CTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHHH----------
T ss_pred CccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHH--HHHHHhc----------
Confidence 4322 22223456899999999987643 4789999999999999999999997532111 1110000
Q ss_pred cccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 039290 989 ADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRL 1036 (1049)
Q Consensus 989 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L 1036 (1049)
.....+..++..+.+++.+||+.||++|||++|++++-
T Consensus 228 ----------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 265 (305)
T 2wtk_C 228 ----------GSYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHS 265 (305)
T ss_dssp ----------CCCCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSH
T ss_pred ----------CCCCCCCccCHHHHHHHHHHccCChhhCCCHHHHhcCc
Confidence 00111123456789999999999999999999999873
No 254
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=7e-37 Score=341.98 Aligned_cols=270 Identities=22% Similarity=0.296 Sum_probs=209.0
Q ss_pred cCChhhHHHHHHHHHhcccCCCCcccccC----CCCCCCceeeeEEEcC--------CCCcEEEEEEeccccccccCCCC
Q 039290 26 TNVTTDQFALLALKEHIKHDPSNLLANNW----STTSSVCSWIGVTCGV--------RNRRVTALNISYLGLTGTIPPQL 93 (1049)
Q Consensus 26 ~~~~~d~~all~~k~~~~~~~~~~l~~~w----~~~~~~c~w~gv~c~~--------~~~~v~~l~l~~~~l~g~~~~~~ 93 (1049)
++..+|++||++||+++..||.+++ ++| ....++|.|.||+|+. ...+|+.|+|++++++ .+|+.+
T Consensus 23 ~~~~~~~~aLl~~k~~~~~~~~~~~-~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l 100 (328)
T 4fcg_A 23 TALRPYHDVLSQWQRHYNADRNRWH-SAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQA 100 (328)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCTTHH-HHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCG
T ss_pred ccCchHHHHHHHHHHhccCCchhhh-hhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhh
Confidence 3567899999999999988998876 488 5677899999999953 3467889999998888 888888
Q ss_pred CCcchhhhhhcccCccccccCcccccccCCcEeccccCCccccCcccccccCCccEEEeCCCCccCCCcccccC------
Q 039290 94 GNLSFLAVLAIRNNSFFGSLPEELSHLRGLKYFDFRFNNFHIEIPSWFVSLPRLQHLLLKHNSFVGKIPETIGY------ 167 (1049)
Q Consensus 94 ~~l~~L~~L~l~~n~~~g~~p~~~~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~------ 167 (1049)
+++++|++|+|++|.++ .+|..++++++|++|+|++|++. .+|..|+++++|++|+|++|.+.+.+|..++.
T Consensus 101 ~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~ 178 (328)
T 4fcg_A 101 FRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGE 178 (328)
T ss_dssp GGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCC
T ss_pred hhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhh
Confidence 88888888888888887 78888888888888888888887 77888888888888888888887788877664
Q ss_pred ---CCcccEEcCCCccCccccCCCcccccccCCCCccceEEeeccccCCCCCCCcccccccceecccccccccccCCCCc
Q 039290 168 ---LSLLQELDLSDNQLSGTIPSSIFNISSCQNLPVLEGLFISYNQLTGPIPTNLWKCRELHVVSLAFNKFQGGIPRDIG 244 (1049)
Q Consensus 168 ---l~~L~~L~Ls~N~l~g~ip~~~~~l~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~ 244 (1049)
+++|++|+|++|+++ .+|..+++ +++|++|+|++|++++ +|..+..+++|++|+|++|++.+.+|..++
T Consensus 179 ~~~l~~L~~L~L~~n~l~-~lp~~l~~------l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~ 250 (328)
T 4fcg_A 179 HQGLVNLQSLRLEWTGIR-SLPASIAN------LQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFG 250 (328)
T ss_dssp EEESTTCCEEEEEEECCC-CCCGGGGG------CTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTT
T ss_pred hccCCCCCEEECcCCCcC-cchHhhcC------CCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhc
Confidence 777777777777777 67766543 3457777777777774 566677777777777777777777777777
Q ss_pred cccccceEEeccccccccCccccccccceEEEeeccccCCCccccccccccccceEEeccCcc
Q 039290 245 NLTSVRNLFLGNNSLIGEIPNEIGNLRNLEVLGVQSSNLAGLIPASIFNISTLKELAVTDNDL 307 (1049)
Q Consensus 245 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l 307 (1049)
.+++|++|+|++|++.+.+|..++++++|+.|+|++|++.+.+|..+.++++|+.+++..+.+
T Consensus 251 ~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~ 313 (328)
T 4fcg_A 251 GRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQ 313 (328)
T ss_dssp CCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGS
T ss_pred CCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHH
Confidence 777777777777777777777777777777777777777777777777777777776665544
No 255
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.7e-37 Score=347.11 Aligned_cols=262 Identities=22% Similarity=0.354 Sum_probs=203.0
Q ss_pred HHhcCCCCCceecCCCcEEEEEEEeCCCcEEEEEEeeccc--CCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEE
Q 039290 758 RATDGFSENKLLGMGSFGSVYKGVLPDGMEIAAKVFHMEF--DGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALV 835 (1049)
Q Consensus 758 ~~~~~~~~~~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 835 (1049)
...++|++.+.||+|+||.||+|+..+ .||+|+++... ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 30 i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv 107 (319)
T 2y4i_B 30 IPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAII 107 (319)
T ss_dssp SCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEE
T ss_pred CCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEE
Confidence 345689999999999999999999754 49999987543 23346678899999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCc
Q 039290 836 LEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEE 915 (1049)
Q Consensus 836 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~ 915 (1049)
|||+++++|.+++...+..+++.+++.++.|+++|++||| ++||+||||||+||+++ ++.+||+|||++.......
T Consensus 108 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~ 183 (319)
T 2y4i_B 108 TSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQ 183 (319)
T ss_dssp CBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHH---HTTCCCCCCCSTTEEEC---CCEECCCSCCC------
T ss_pred eecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChhhEEEe-CCCEEEeecCCcccccccc
Confidence 9999999999999887767999999999999999999999 99999999999999998 6799999999987653211
Q ss_pred ----cccccccccccCcccccccCC---------CCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhcccc
Q 039290 916 ----SMRQTKTLGTIGYMAPEYGRE---------GKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLS 982 (1049)
Q Consensus 916 ----~~~~~~~~~~~~y~aPE~~~~---------~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 982 (1049)
........|++.|+|||++.. ..++.++||||+||++|||++|+.||......+..... ....
T Consensus 184 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~--~~~~-- 259 (319)
T 2y4i_B 184 AGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQM--GTGM-- 259 (319)
T ss_dssp ----CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHH--HTTC--
T ss_pred ccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHh--ccCC--
Confidence 112233458899999998864 45788999999999999999999999764322211111 0000
Q ss_pred CCcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHhhhh
Q 039290 983 CSITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRETLSA 1045 (1049)
Q Consensus 983 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~~~~ 1045 (1049)
.+.. . ...++.++.+++.+||+.||++|||++|+++.|+++.++...
T Consensus 260 -------~~~~---~------~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~~ 306 (319)
T 2y4i_B 260 -------KPNL---S------QIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRR 306 (319)
T ss_dssp -------CCCC---C------CSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC------
T ss_pred -------CCCC---C------cCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 0000 0 012345688999999999999999999999999998876543
No 256
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1.5e-36 Score=333.75 Aligned_cols=251 Identities=24% Similarity=0.328 Sum_probs=204.5
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeeccc--CCCHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEE
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEF--DGSLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVL 836 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 836 (1049)
.++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 100 (287)
T 2wei_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (287)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEE
Confidence 457999999999999999999965 78999999997543 345678999999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecC---CCceEEecccCceecCC
Q 039290 837 EYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNE---SMVGHLSDFGIAKILGK 913 (1049)
Q Consensus 837 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~---~~~~kl~DfGla~~~~~ 913 (1049)
||+++++|.+++.... .+++.+++.++.|++.|++||| +.||+||||||+||+++. ++.+||+|||++.....
T Consensus 101 e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~ 176 (287)
T 2wei_A 101 ELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (287)
T ss_dssp CCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCC
T ss_pred EccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChhhEEEecCCCcccEEEeccCcceeecC
Confidence 9999999999887654 4899999999999999999999 999999999999999975 34799999999986643
Q ss_pred CccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhccccc
Q 039290 914 EESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANL 993 (1049)
Q Consensus 914 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1049)
... .....+++.|+|||++.+ .++.++||||+|+++|+|++|..||......+. ........
T Consensus 177 ~~~--~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-~~~~~~~~-------------- 238 (287)
T 2wei_A 177 NTK--MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDI-LKRVETGK-------------- 238 (287)
T ss_dssp CSS--CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHCC--------------
T ss_pred CCc--cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHH-HHHHHcCC--------------
Confidence 322 233468899999998865 589999999999999999999999976322211 11110000
Q ss_pred ccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 994 LNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 994 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
.....+....++.++.+++.+||+.||++|||++|++++
T Consensus 239 ---~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 239 ---YAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp ---CCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred ---CCCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 000011112345678999999999999999999999986
No 257
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=4.6e-37 Score=348.99 Aligned_cols=264 Identities=21% Similarity=0.280 Sum_probs=185.5
Q ss_pred hcCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeecccCC--CHHHHHHHHHHHhhcCCCceeeEEeeeecC------C
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEFDG--SLESFHAECKVMGSIRHRNLVKIISSCSNN------D 830 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~hpniv~l~~~~~~~------~ 830 (1049)
.++|+..+.||+|+||.||+|.. .+|+.||+|++...... ..+.+.+|+++++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 46899999999999999999995 57899999999754322 346788999999999999999999998654 5
Q ss_pred eeEEEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCcee
Q 039290 831 FKALVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKI 910 (1049)
Q Consensus 831 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~ 910 (1049)
..++|+|++ +++|.+++.. ..+++..+..++.||++||+||| +.||+||||||+||+++.++.+||+|||+++.
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~ 181 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH 181 (367)
T ss_dssp CCEEEEECC-CEECC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC------
T ss_pred eEEEEeccc-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHhhEEECCCCCEEEeecccccc
Confidence 679999999 6799998865 34899999999999999999999 99999999999999999999999999999986
Q ss_pred cCCCccccccccccccCcccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCC---cc
Q 039290 911 LGKEESMRQTKTLGTIGYMAPEYGRE-GKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCS---IT 986 (1049)
Q Consensus 911 ~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~ 986 (1049)
.... .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.+....+. ...... ....+. +.
T Consensus 182 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-l~~i~~-~~g~p~~~~~~ 255 (367)
T 2fst_X 182 TADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ-LKLILR-LVGTPGAELLK 255 (367)
T ss_dssp -------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHH-HHCSCCHHHHT
T ss_pred cccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHH-HhCCCCHHHHH
Confidence 5432 234578999999999876 6789999999999999999999999976332211 111111 000000 00
Q ss_pred hhcc-------cccccccccCc-hhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 987 EVAD-------ANLLNCEENDF-SAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 987 ~~~~-------~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
.+.. ..+...+...+ ......+..+.+++.+|++.||++|||++|+++|
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 256 KISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp TCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 0000 00000011111 0112345678999999999999999999999986
No 258
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.5e-36 Score=345.64 Aligned_cols=268 Identities=22% Similarity=0.259 Sum_probs=202.8
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccC-CCHHHHHHHHHHHhhcCCCceeeEEeeeecC-----Cee
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFD-GSLESFHAECKVMGSIRHRNLVKIISSCSNN-----DFK 832 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~-----~~~ 832 (1049)
.++|++.+.||+|+||.||+|+.. +++.||+|++..... ...+.+.+|++++++++||||+++++++... ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 457999999999999999999954 788999999974332 2346788999999999999999999998654 468
Q ss_pred EEEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecC
Q 039290 833 ALVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILG 912 (1049)
Q Consensus 833 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~ 912 (1049)
++||||+++ +|.+++... .+++.+++.++.|++.||+||| ++||+||||||+||+++.++.+||+|||++....
T Consensus 106 ~iv~e~~~~-~L~~~l~~~--~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 179 (364)
T 3qyz_A 106 YIVQDLMET-DLYKLLKTQ--HLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179 (364)
T ss_dssp EEEEECCSE-EHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEcccCc-CHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChHhEEECCCCCEEEEeCcceEecC
Confidence 999999975 999988764 3899999999999999999999 9999999999999999999999999999998775
Q ss_pred CCccc--cccccccccCcccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchh-
Q 039290 913 KEESM--RQTKTLGTIGYMAPEYGRE-GKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEV- 988 (1049)
Q Consensus 913 ~~~~~--~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~- 988 (1049)
..... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+.. ....+ .........+
T Consensus 180 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~-~~i~~-~~~~~~~~~~~ 257 (364)
T 3qyz_A 180 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL-NHILG-ILGSPSQEDLN 257 (364)
T ss_dssp GGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHH-HHHHH-HHCSCCHHHHH
T ss_pred CCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHH-HHHHH-HhCCCCHHHHH
Confidence 43321 1234578999999998654 45899999999999999999999999764332221 11110 0000000000
Q ss_pred --cc----cccccccc-cC---chhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 989 --AD----ANLLNCEE-ND---FSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 989 --~~----~~~~~~~~-~~---~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
.+ ......+. .. .......+.++.+++.+|++.||++|||++|+++|
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 258 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp TCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00 00000000 00 01112345778999999999999999999999986
No 259
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=1.1e-36 Score=337.64 Aligned_cols=252 Identities=25% Similarity=0.335 Sum_probs=195.0
Q ss_pred hcCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCceeeEEeeeec----------
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRNLVKIISSCSN---------- 828 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~---------- 828 (1049)
.++|++.+.||+|+||.||+|+. .+++.||+|++... ....+.+.+|++++++++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 45789999999999999999996 47899999999653 2345678899999999999999999998754
Q ss_pred ---CCeeEEEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecc
Q 039290 829 ---NDFKALVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDF 905 (1049)
Q Consensus 829 ---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Df 905 (1049)
.+..++||||+++|+|.+++......+++.+++.++.|+++|++||| ++||+||||||+||+++.++.+||+||
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dlkp~Nil~~~~~~~kl~df 160 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDF 160 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCC
T ss_pred cccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHH---hCCeecccCCHHhEEEcCCCCEEEeeC
Confidence 45779999999999999999877777899999999999999999999 999999999999999999999999999
Q ss_pred cCceecCCCc-------------cccccccccccCcccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCCccccccch
Q 039290 906 GIAKILGKEE-------------SMRQTKTLGTIGYMAPEYGREG-KVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMS 971 (1049)
Q Consensus 906 Gla~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~ 971 (1049)
|++....... ........+++.|+|||++.+. .++.++||||+||++|||++ ||.........
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~ 237 (303)
T 1zy4_A 161 GLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNI 237 (303)
T ss_dssp CCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHH
T ss_pred cchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHHH
Confidence 9998664321 1122345689999999998764 68999999999999999998 55432111111
Q ss_pred HHHhhhhccccCCcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 972 LKRWVGDSLLSCSITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 972 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
........ .. . ........+..+.+++.+||+.||++|||++|++++
T Consensus 238 ~~~~~~~~---~~--------~------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 238 LKKLRSVS---IE--------F------PPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp HHHHHSTT---CC--------C------CTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred HHhccccc---cc--------c------CccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 11111000 00 0 001112345678999999999999999999999986
No 260
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=1.1e-36 Score=349.96 Aligned_cols=264 Identities=24% Similarity=0.281 Sum_probs=195.2
Q ss_pred cCCCCCceecCCCcEEEEEEEeCCCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCceeeEEeeeecCC------eeEE
Q 039290 761 DGFSENKLLGMGSFGSVYKGVLPDGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRNLVKIISSCSNND------FKAL 834 (1049)
Q Consensus 761 ~~~~~~~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~------~~~l 834 (1049)
.+|+..+.||+|+||+||+|+...+..||+|++..... ...+|+++++.++||||+++++++...+ ..++
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 115 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL 115 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence 46889999999999999999988777899998865432 2247999999999999999999985433 3789
Q ss_pred EEeccCCCChhhhh--hcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeec-CCCceEEecccCceec
Q 039290 835 VLEYMSNGSLEKCL--YSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLN-ESMVGHLSDFGIAKIL 911 (1049)
Q Consensus 835 v~e~~~~g~L~~~l--~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~-~~~~~kl~DfGla~~~ 911 (1049)
||||++++.+.... ......+++..++.++.|+++||+||| ++||+||||||+||+++ .++.+||+|||+|+..
T Consensus 116 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~ 192 (394)
T 4e7w_A 116 VLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL 192 (394)
T ss_dssp EEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccc
Confidence 99999875443332 123456899999999999999999999 99999999999999999 7999999999999876
Q ss_pred CCCccccccccccccCcccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcc---h
Q 039290 912 GKEESMRQTKTLGTIGYMAPEYGREG-KVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSIT---E 987 (1049)
Q Consensus 912 ~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~ 987 (1049)
..... .....+|+.|+|||++.+. .++.++||||+||++|||++|+.||.+....+. ........ ..+... .
T Consensus 193 ~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~-l~~i~~~~-g~p~~~~~~~ 268 (394)
T 4e7w_A 193 IAGEP--NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQ-LVEIIKVL-GTPSREQIKT 268 (394)
T ss_dssp CTTCC--CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHHH-CCCCHHHHHH
T ss_pred cCCCC--CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHh-CCCCHHHHHh
Confidence 44332 2345789999999988664 589999999999999999999999976432221 11111100 000000 0
Q ss_pred hc----ccccccccccCc--hhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 988 VA----DANLLNCEENDF--SAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 988 ~~----~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
.. ...........+ ..+...+.++.+++.+||+.||++|||+.|+++|
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 269 MNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp HCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 00 000000000000 0112356789999999999999999999999987
No 261
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.1e-36 Score=340.71 Aligned_cols=269 Identities=20% Similarity=0.252 Sum_probs=196.2
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCceeeEEeeee-----------
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRNLVKIISSCS----------- 827 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~----------- 827 (1049)
.++|++.+.||+|+||.||+|+.. +++.||+|++........+++.+|++++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 357899999999999999999975 58999999997665455678899999999999999999999873
Q ss_pred ---cCCeeEEEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeec-CCCceEEe
Q 039290 828 ---NNDFKALVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLN-ESMVGHLS 903 (1049)
Q Consensus 828 ---~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~-~~~~~kl~ 903 (1049)
+.+..++||||++ |+|.+++... .+++..++.++.|+++||+||| ++||+||||||+||+++ +++.+||+
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl~ 163 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQG--PLLEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLVLKIG 163 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTTEEEEC
T ss_pred cccccCceeEEeeccC-CCHHHHhhcC--CccHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCeEEEc
Confidence 4467899999997 5999988653 4889999999999999999999 99999999999999997 56799999
Q ss_pred cccCceecCCCcc--ccccccccccCcccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhcc
Q 039290 904 DFGIAKILGKEES--MRQTKTLGTIGYMAPEYGRE-GKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSL 980 (1049)
Q Consensus 904 DfGla~~~~~~~~--~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 980 (1049)
|||+++....... .......++..|+|||.+.+ ..++.++||||+||++|||++|+.||......+. .........
T Consensus 164 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~ 242 (320)
T 2i6l_A 164 DFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQ-MQLILESIP 242 (320)
T ss_dssp CCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHHSC
T ss_pred cCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhcC
Confidence 9999987643221 12233457889999998765 6789999999999999999999999976432211 111111000
Q ss_pred cc--CCcchh-------cccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 981 LS--CSITEV-------ADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 981 ~~--~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
.. ....+. ..................++.++.+++.+||+.||++|||++|+++|
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 243 VVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp CCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred CCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 00 000000 00000000000011112356789999999999999999999999986
No 262
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=3e-36 Score=338.08 Aligned_cols=270 Identities=23% Similarity=0.262 Sum_probs=204.0
Q ss_pred HhcCCCCCceecCCCcEEEEEEEe--CCCcEEEEEEeecccC--CCHHHHHHHHHHHhhc---CCCceeeEEeeee----
Q 039290 759 ATDGFSENKLLGMGSFGSVYKGVL--PDGMEIAAKVFHMEFD--GSLESFHAECKVMGSI---RHRNLVKIISSCS---- 827 (1049)
Q Consensus 759 ~~~~~~~~~~lg~G~fg~Vy~a~~--~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l---~hpniv~l~~~~~---- 827 (1049)
..++|++.+.||+|+||.||+|+. .+++.||+|+++.... .....+.+|+.+++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 346899999999999999999997 4688999999975432 2234667788777766 8999999999987
Q ss_pred -cCCeeEEEEeccCCCChhhhhhcCC-CccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecc
Q 039290 828 -NNDFKALVLEYMSNGSLEKCLYSDN-YFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDF 905 (1049)
Q Consensus 828 -~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Df 905 (1049)
.....++||||++ |+|.+++.... ..+++.+++.++.|+++||+||| +.||+||||||+||+++.++.+||+||
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~gi~H~dlkp~Nili~~~~~~kl~Df 164 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADF 164 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECSC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHHHeEEcCCCCEEEecC
Confidence 5567899999997 59999987653 35899999999999999999999 999999999999999999999999999
Q ss_pred cCceecCCCccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccc--cC
Q 039290 906 GIAKILGKEESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLL--SC 983 (1049)
Q Consensus 906 Gla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~--~~ 983 (1049)
|++....... ......+++.|+|||++.+..++.++||||+||++|||++|+.||......+. .......... ..
T Consensus 165 g~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~i~~~~~~~~~~ 241 (326)
T 1blx_A 165 GLARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQ-LGKILDVIGLPGEE 241 (326)
T ss_dssp CSCCCCCGGG--GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCCCGG
T ss_pred cccccccCCC--CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHH-HHHHHHHcCCCCcc
Confidence 9998764332 23345689999999999988999999999999999999999999976432221 1111110000 00
Q ss_pred Ccchhcc---cccccc-cccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 984 SITEVAD---ANLLNC-EENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 984 ~~~~~~~---~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
.+..... ...... ..........++..+.+++.+||+.||++|||+.|+++|
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 242 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp GSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0000000 000000 000011123356778999999999999999999999975
No 263
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=2.2e-36 Score=350.23 Aligned_cols=263 Identities=23% Similarity=0.295 Sum_probs=194.5
Q ss_pred cCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCceeeEEeeeecC------CeeE
Q 039290 761 DGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRNLVKIISSCSNN------DFKA 833 (1049)
Q Consensus 761 ~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~------~~~~ 833 (1049)
.+|+..+.||+|+||+||+|++. +++.||||++.... ....+|++++++++||||+++++++... ...+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 35888899999999999999975 68999999986542 2234799999999999999999988431 2467
Q ss_pred EEEeccCCCChhhhhh---cCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCC-CceEEecccCce
Q 039290 834 LVLEYMSNGSLEKCLY---SDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNES-MVGHLSDFGIAK 909 (1049)
Q Consensus 834 lv~e~~~~g~L~~~l~---~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~-~~~kl~DfGla~ 909 (1049)
+||||+++ ++.+.+. .....+++..++.++.||++||+||| +.||+||||||+|||++.+ +.+||+|||+++
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 99999986 6665543 24456899999999999999999999 9999999999999999954 678999999998
Q ss_pred ecCCCccccccccccccCcccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchh
Q 039290 910 ILGKEESMRQTKTLGTIGYMAPEYGREG-KVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEV 988 (1049)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 988 (1049)
....... .....+|+.|+|||++.+. .++.++||||+||++|||++|+.||.+....+ ......... .......+
T Consensus 206 ~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~-~l~~i~~~l-g~p~~~~~ 281 (420)
T 1j1b_A 206 QLVRGEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD-QLVEIIKVL-GTPTREQI 281 (420)
T ss_dssp ECCTTCC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHH-CSCCHHHH
T ss_pred hcccCCC--ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHh-CCCCHHHH
Confidence 7644332 2345789999999998764 78999999999999999999999997643221 111111100 00000000
Q ss_pred c--cc-----ccccccccCch--hhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 989 A--DA-----NLLNCEENDFS--AREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 989 ~--~~-----~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
. .+ .........+. .+...+.++.+++.+||+.||++|||+.|+++|
T Consensus 282 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 282 REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp HHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 0 00 00000000000 112345789999999999999999999999976
No 264
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=6.4e-37 Score=341.30 Aligned_cols=260 Identities=23% Similarity=0.342 Sum_probs=200.7
Q ss_pred cHHHHHHHhcCCCCCceecCCCcEEEEEEEeCCCcEEEEEEeecccC--CCHHHHHHHHHHHhhcC--CCceeeEEeeee
Q 039290 752 SYQDLLRATDGFSENKLLGMGSFGSVYKGVLPDGMEIAAKVFHMEFD--GSLESFHAECKVMGSIR--HRNLVKIISSCS 827 (1049)
Q Consensus 752 ~~~~~~~~~~~~~~~~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~--hpniv~l~~~~~ 827 (1049)
.++.+....++|++.+.||+|+||.||+|+..+++.||+|++..... ...+.+.+|++++++++ ||||+++++++.
T Consensus 19 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~ 98 (313)
T 3cek_A 19 YFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI 98 (313)
T ss_dssp -CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEE
T ss_pred CeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEee
Confidence 33334444567999999999999999999988899999999975432 23467899999999997 599999999999
Q ss_pred cCCeeEEEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccC
Q 039290 828 NNDFKALVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGI 907 (1049)
Q Consensus 828 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGl 907 (1049)
+.+..++||| +.+++|.+++.... .+++.+++.++.|+++||+||| +.+|+||||||+||++++ +.+||+|||+
T Consensus 99 ~~~~~~lv~e-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~-~~~kL~Dfg~ 172 (313)
T 3cek_A 99 TDQYIYMVME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVD-GMLKLIDFGI 172 (313)
T ss_dssp CSSEEEEEEC-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEET-TEEEECCCSS
T ss_pred cCCEEEEEEe-cCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEEEC-CeEEEeeccc
Confidence 9999999999 55789999998754 5899999999999999999999 999999999999999975 8999999999
Q ss_pred ceecCCCcc-ccccccccccCcccccccCC-----------CCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHh
Q 039290 908 AKILGKEES-MRQTKTLGTIGYMAPEYGRE-----------GKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRW 975 (1049)
Q Consensus 908 a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~-----------~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~ 975 (1049)
+........ .......|++.|+|||++.+ ..++.++||||+||++|||++|+.||.............
T Consensus 173 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~ 252 (313)
T 3cek_A 173 ANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 252 (313)
T ss_dssp SCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHH
T ss_pred cccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHH
Confidence 987644322 12234568999999999865 468889999999999999999999997543222111111
Q ss_pred hhhccccCCcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 039290 976 VGDSLLSCSITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRL 1036 (1049)
Q Consensus 976 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L 1036 (1049)
.. ... ....+...+.++.+++.+||+.||++|||++|++++-
T Consensus 253 ~~-------------~~~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~ 294 (313)
T 3cek_A 253 ID-------------PNH------EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 294 (313)
T ss_dssp HC-------------TTS------CCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred Hh-------------ccc------ccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCc
Confidence 11 000 0001111245789999999999999999999999874
No 265
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=2.4e-36 Score=344.59 Aligned_cols=264 Identities=19% Similarity=0.230 Sum_probs=198.3
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccCC--CHHHHHHHHHHHhhcCCCceeeEEeeeecCCee----
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFDG--SLESFHAECKVMGSIRHRNLVKIISSCSNNDFK---- 832 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~---- 832 (1049)
.++|...+.||+|+||.||+|+.. +|+.||+|++...... ..+.+.+|+.+++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 468999999999999999999954 7899999999764332 246788999999999999999999999877654
Q ss_pred --EEEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCcee
Q 039290 833 --ALVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKI 910 (1049)
Q Consensus 833 --~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~ 910 (1049)
++||||++ ++|.+.+.. .+++.+++.++.|++.|++||| +.||+||||||+||+++.++.+||+|||+++.
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 193 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGM---EFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARH 193 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECSTTCC--
T ss_pred eEEEEEcccc-ccHHHHhhc---CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCcCHHHeEECCCCCEEEEecCcccc
Confidence 99999997 588887643 3899999999999999999999 99999999999999999999999999999986
Q ss_pred cCCCccccccccccccCcccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhcccc--CCcch
Q 039290 911 LGKEESMRQTKTLGTIGYMAPEYGRE-GKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLS--CSITE 987 (1049)
Q Consensus 911 ~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~ 987 (1049)
.... .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||......+.. .......... .....
T Consensus 194 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~-~~i~~~~~~~~~~~~~~ 268 (371)
T 4exu_A 194 ADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQL-TQILKVTGVPGTEFVQK 268 (371)
T ss_dssp ----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHH-HHHHHHHCCCCHHHHTT
T ss_pred cccC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHH-HHHHHHhCCCcHHHHHH
Confidence 5432 234568999999999877 67899999999999999999999999763322111 1110000000 00000
Q ss_pred hc-------ccccccccccC-chhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 988 VA-------DANLLNCEEND-FSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 988 ~~-------~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
+. ........... ......++.++.+++.+|++.||++|||++|++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 269 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp CSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 00 00000000001 11112346789999999999999999999999986
No 266
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=4.4e-36 Score=341.77 Aligned_cols=276 Identities=21% Similarity=0.232 Sum_probs=193.1
Q ss_pred HHHHHHhcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCceeeEEeeeecCC--
Q 039290 754 QDLLRATDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRNLVKIISSCSNND-- 830 (1049)
Q Consensus 754 ~~~~~~~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~-- 830 (1049)
.......++|++.+.||+|+||+||+|+.. +++.||||++.... .....+.+|++.++.++||||+++++++...+
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 345567789999999999999999999964 78999999986543 33456778888999999999999999986533
Q ss_pred -----eeEEEEeccCCCChhhhhh---cCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecC-CCceE
Q 039290 831 -----FKALVLEYMSNGSLEKCLY---SDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNE-SMVGH 901 (1049)
Q Consensus 831 -----~~~lv~e~~~~g~L~~~l~---~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~-~~~~k 901 (1049)
..++||||+++ ++.+.+. .....+++..++.++.|++.|++||| .++.||+||||||+||+++. ++.+|
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH-~~~~~ivH~Dlkp~NIll~~~~~~~k 172 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLH-LPSVNVCHRDIKPHNVLVNEADGTLK 172 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHT-STTTCCBCSCCCGGGEEEETTTTEEE
T ss_pred cccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHh-CCCCCeecCcCCHHHEEEeCCCCcEE
Confidence 27899999986 5544433 24446889999999999999999999 44789999999999999996 89999
Q ss_pred EecccCceecCCCccccccccccccCcccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhcc
Q 039290 902 LSDFGIAKILGKEESMRQTKTLGTIGYMAPEYGREG-KVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSL 980 (1049)
Q Consensus 902 l~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 980 (1049)
|+|||+++....... .....||+.|+|||++.+. .++.++||||+||++|||++|+.||......+. .........
T Consensus 173 l~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~-~~~~~~~~~ 249 (360)
T 3e3p_A 173 LCDFGSAKKLSPSEP--NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQ-LHEIVRVLG 249 (360)
T ss_dssp ECCCTTCBCCCTTSC--CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHHHC
T ss_pred EeeCCCceecCCCCC--cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHH-HHHHHHHcC
Confidence 999999987654332 2345689999999988654 489999999999999999999999976432221 111111000
Q ss_pred cc-----------CCcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 981 LS-----------CSITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 981 ~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
.. ....+..+.................+.++.+++.+||+.||.+|||++|+++|
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 250 CPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp CCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 00 00000000000000000001111246789999999999999999999999986
No 267
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=2.8e-35 Score=338.70 Aligned_cols=347 Identities=20% Similarity=0.227 Sum_probs=201.7
Q ss_pred ccCCCCCCCce-eeeEEEcCCCCcEEEEEEeccccccccCCCCCCcchhhhhhcccCccccccCcc-cccccCCcEeccc
Q 039290 52 NNWSTTSSVCS-WIGVTCGVRNRRVTALNISYLGLTGTIPPQLGNLSFLAVLAIRNNSFFGSLPEE-LSHLRGLKYFDFR 129 (1049)
Q Consensus 52 ~~w~~~~~~c~-w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~l~~n~~~g~~p~~-~~~L~~L~~L~l~ 129 (1049)
++|..+.+||. |.+..|.....++ ............-..++.+++|++++|.+. .+|.. +.++++|++|+++
T Consensus 4 ~~~~~~~~C~~~~~~~~c~~~~~~i-----~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~-~l~~~~~~~l~~L~~L~L~ 77 (390)
T 3o6n_A 4 KPRQPEYKCIDSNLQYDCVFYDVHI-----DMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLN 77 (390)
T ss_dssp ---CCEECBCC------EEEESCEE-----CSSCCCCEESCSSGGGCCCSEEEEESCEES-EECTHHHHHCCCCSEEECT
T ss_pred CCCCCccceehhhhhhccceeeeee-----ecccccccccccccccCCceEEEecCCchh-hCChhHhcccccCcEEECC
Confidence 47988888885 5555553222111 221212122222334567777777777765 45554 4677777777777
Q ss_pred cCCccccCcccccccCCccEEEeCCCCccCCCcccccCCCcccEEcCCCccCccccCCCcccccccCCCCccceEEeecc
Q 039290 130 FNNFHIEIPSWFVSLPRLQHLLLKHNSFVGKIPETIGYLSLLQELDLSDNQLSGTIPSSIFNISSCQNLPVLEGLFISYN 209 (1049)
Q Consensus 130 ~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~l~~l~~L~~L~l~~N 209 (1049)
+|++.+..|..|..+++|++|+|++|.+++..|..++.+++|++|+|++|+++ .+|..++ .++++|++|++++|
T Consensus 78 ~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~-----~~l~~L~~L~L~~n 151 (390)
T 3o6n_A 78 DLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIF-----HNTPKLTTLSMSNN 151 (390)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTT-----TTCTTCCEEECCSS
T ss_pred CCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccC-cCCHHHh-----cCCCCCcEEECCCC
Confidence 77777666667777777777777777777666666777777777777777776 5555432 23445666666666
Q ss_pred ccCCCCCCCcccccccceecccccccccccCCCCccccccceEEeccccccccCccccccccceEEEeeccccCCCcccc
Q 039290 210 QLTGPIPTNLWKCRELHVVSLAFNKFQGGIPRDIGNLTSVRNLFLGNNSLIGEIPNEIGNLRNLEVLGVQSSNLAGLIPA 289 (1049)
Q Consensus 210 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~ 289 (1049)
++++..|..+..+++|+.|++++|++++. .++.+++|+.|++++|.++ +.
T Consensus 152 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~------------------------~~--- 201 (390)
T 3o6n_A 152 NLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLS------------------------TL--- 201 (390)
T ss_dssp CCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCS------------------------EE---
T ss_pred ccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeeccccccc------------------------cc---
Confidence 66654455555555555555555555432 2334444555555555443 22
Q ss_pred ccccccccceEEeccCccCCCCCCcccCCCCCccEEEcCCCCCCCCCCccccCCCCCceeecccCccccCcccccccccc
Q 039290 290 SIFNISTLKELAVTDNDLLGSLPSSIDLGLPNLERLFLGENNFSGTIPSSLTNISELSVLDFGFNSFSGLIPTTFGNLRS 369 (1049)
Q Consensus 290 ~~~~l~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 369 (1049)
...++|++|++++|.+.. +|... .++|+.|++++|++++. ..+..+++|++|++++|.+.+..|..|..+++
T Consensus 202 --~~~~~L~~L~l~~n~l~~-~~~~~---~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~ 273 (390)
T 3o6n_A 202 --AIPIAVEELDASHNSINV-VRGPV---NVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQR 273 (390)
T ss_dssp --ECCSSCSEEECCSSCCCE-EECCC---CSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSS
T ss_pred --CCCCcceEEECCCCeeee-ccccc---cccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHcccccc
Confidence 122355566666665542 23322 35677777777777643 46777777888888888877777777777788
Q ss_pred cceeecccccccCCCCCcccccccccCCCCcEEEccCCccccCCCCccccccccccEEEccCCccccCCCCCCCCCCCcc
Q 039290 370 LKLLSLAGNVLTSPTPDLSFLSSLTSCRNLEIIYLSENPINGILPSSIGNFSISMKSLSMESCNISGGIPKELGNINNLT 449 (1049)
Q Consensus 370 L~~L~L~~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~~~~l~~L~ 449 (1049)
|++|++++|.+++++.. +..+++|++|++++|+++++ | ..+..+++|+
T Consensus 274 L~~L~L~~n~l~~~~~~------~~~l~~L~~L~L~~n~l~~~-~-------------------------~~~~~l~~L~ 321 (390)
T 3o6n_A 274 LERLYISNNRLVALNLY------GQPIPTLKVLDLSHNHLLHV-E-------------------------RNQPQFDRLE 321 (390)
T ss_dssp CCEEECCSSCCCEEECS------SSCCTTCCEEECCSSCCCCC-G-------------------------GGHHHHTTCS
T ss_pred CCEEECCCCcCcccCcc------cCCCCCCCEEECCCCcceec-C-------------------------ccccccCcCC
Confidence 88888888877765432 34566677777777766532 2 2233344555
Q ss_pred EEEccCCcccccCCccccCcCCCcceEeeccccC
Q 039290 450 VIRLGNNELTGTIPVTLGRLQKLQGLYLQNNKLE 483 (1049)
Q Consensus 450 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 483 (1049)
.|+|++|.+++. + +..+++|++|++++|++.
T Consensus 322 ~L~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~ 352 (390)
T 3o6n_A 322 NLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWD 352 (390)
T ss_dssp EEECCSSCCCCC-C--CCTTCCCSEEECCSSCEE
T ss_pred EEECCCCcccee-C--chhhccCCEEEcCCCCcc
Confidence 555555555532 2 444555555555555554
No 268
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=2.1e-36 Score=343.34 Aligned_cols=269 Identities=22% Similarity=0.240 Sum_probs=200.6
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccC-CCHHHHHHHHHHHhhcCCCceeeEEeeeecC-----Cee
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFD-GSLESFHAECKVMGSIRHRNLVKIISSCSNN-----DFK 832 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~-----~~~ 832 (1049)
.++|++.+.||+|+||.||+|+.. +|+.||||++..... .....+.+|++++++++||||+++++++... ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 457899999999999999999965 788999999964322 2345678999999999999999999987654 678
Q ss_pred EEEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecC
Q 039290 833 ALVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILG 912 (1049)
Q Consensus 833 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~ 912 (1049)
++||||++ ++|.+++... .+++.+++.++.|+++||+||| +.||+||||||+||+++.++.+||+|||++....
T Consensus 90 ~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQ--MLSDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIID 163 (353)
T ss_dssp EEEECCCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEeccC-ccHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence 99999997 5899988764 4899999999999999999999 9999999999999999999999999999998765
Q ss_pred CCccc---------cccccccccCcccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccc-
Q 039290 913 KEESM---------RQTKTLGTIGYMAPEYGRE-GKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLL- 981 (1049)
Q Consensus 913 ~~~~~---------~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~- 981 (1049)
..... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+.. ....+....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~~~~~~~~~ 242 (353)
T 2b9h_A 164 ESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQL-LLIFGIIGTP 242 (353)
T ss_dssp ----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH-HHHHHHHCCC
T ss_pred cccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHH-HHHHHHhCCC
Confidence 32211 1223468999999998754 67899999999999999999999999764322111 111100000
Q ss_pred --cCCcchhcccc-------cccccccC-chhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 982 --SCSITEVADAN-------LLNCEEND-FSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 982 --~~~~~~~~~~~-------~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
........... +....... ......++.++.+++.+||+.||++|||++|+++|
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 243 HSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp CSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred chhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00000000000 00000000 01112456788999999999999999999999986
No 269
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.3e-36 Score=347.98 Aligned_cols=267 Identities=19% Similarity=0.227 Sum_probs=183.0
Q ss_pred CCC-CceecCCCcEEEEEEEeC---CCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCceeeEEeeee--cCCeeEEEE
Q 039290 763 FSE-NKLLGMGSFGSVYKGVLP---DGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRNLVKIISSCS--NNDFKALVL 836 (1049)
Q Consensus 763 ~~~-~~~lg~G~fg~Vy~a~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~--~~~~~~lv~ 836 (1049)
|++ .++||+|+||+||+|+.. +++.||+|++... .....+.+|++++++++||||+++++++. .....++||
T Consensus 22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~ 99 (405)
T 3rgf_A 22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF 99 (405)
T ss_dssp EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSS--SCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEE
T ss_pred hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCC--CCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEE
Confidence 554 468999999999999965 5788999999644 33467889999999999999999999994 467899999
Q ss_pred eccCCCChhhhhhcC--------CCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeee----cCCCceEEec
Q 039290 837 EYMSNGSLEKCLYSD--------NYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLL----NESMVGHLSD 904 (1049)
Q Consensus 837 e~~~~g~L~~~l~~~--------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~----~~~~~~kl~D 904 (1049)
||+++ +|.+++... ...+++..++.++.||+.||+||| +.||+||||||+||++ +.++.+||+|
T Consensus 100 e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~D 175 (405)
T 3rgf_A 100 DYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIAD 175 (405)
T ss_dssp ECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECCSSTTTTCEEECC
T ss_pred eCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeCCCcCHHHeEEecCCCCCCcEEEEE
Confidence 99975 787776532 124899999999999999999999 9999999999999999 6778999999
Q ss_pred ccCceecCCCcc--ccccccccccCcccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCCcccccc--------chHH
Q 039290 905 FGIAKILGKEES--MRQTKTLGTIGYMAPEYGRE-GKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGE--------MSLK 973 (1049)
Q Consensus 905 fGla~~~~~~~~--~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~--------~~~~ 973 (1049)
||+|+....... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... ....
T Consensus 176 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~ 255 (405)
T 3rgf_A 176 MGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLD 255 (405)
T ss_dssp TTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHH
T ss_pred CCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHH
Confidence 999987653221 22334678999999999877 458999999999999999999999997533210 0111
Q ss_pred Hhhhhc--cccCCcchhcc--------cccccccccCchhh-------HHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 974 RWVGDS--LLSCSITEVAD--------ANLLNCEENDFSAR-------EQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 974 ~~~~~~--~~~~~~~~~~~--------~~~~~~~~~~~~~~-------~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
...... .....+..+.. .............. ...+.++.+++.+||+.||++|||++|+++|
T Consensus 256 ~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~h 334 (405)
T 3rgf_A 256 RIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 334 (405)
T ss_dssp HHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 111000 00000000000 00000000000000 0114568899999999999999999999986
No 270
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=5.8e-36 Score=337.66 Aligned_cols=265 Identities=20% Similarity=0.250 Sum_probs=203.4
Q ss_pred hcCCCCCceecCCCcEEEEEEEe--CCCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCC------ceeeEEeeeecCCe
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVL--PDGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHR------NLVKIISSCSNNDF 831 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~--~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hp------niv~l~~~~~~~~~ 831 (1049)
.++|++.+.||+|+||+||+|.. .+++.||+|+++.. ....+.+.+|+++++.++|+ +++++++++.+.+.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 35799999999999999999986 36889999999643 23356788999999988765 49999999999999
Q ss_pred eEEEEeccCCCChhhhhhcCC-CccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecC--------------
Q 039290 832 KALVLEYMSNGSLEKCLYSDN-YFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNE-------------- 896 (1049)
Q Consensus 832 ~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~-------------- 896 (1049)
.++||||+ +++|.+++...+ ..+++.+++.++.|+++||+||| ++||+||||||+||+++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~ 167 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEAYNPKIKRD 167 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCCCEEEEEC----CE
T ss_pred EEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeccccccccCCccccc
Confidence 99999999 889999987654 36889999999999999999999 999999999999999987
Q ss_pred -----CCceEEecccCceecCCCccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccch
Q 039290 897 -----SMVGHLSDFGIAKILGKEESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMS 971 (1049)
Q Consensus 897 -----~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~ 971 (1049)
++.+||+|||++...... .....||+.|+|||++.+..++.++||||+||++|||++|..||......+..
T Consensus 168 ~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~ 243 (339)
T 1z57_A 168 ERTLINPDIKVVDFGSATYDDEH----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHL 243 (339)
T ss_dssp EEEESCCCEEECCCSSCEETTSC----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHH
T ss_pred cccccCCCceEeeCcccccCccc----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence 668999999999875432 23356899999999999989999999999999999999999999764322211
Q ss_pred HHHhhhhccccCCc--------chhcccc----------------cccccccCchhhHHHHHHHHHHHhhccccCCCCCC
Q 039290 972 LKRWVGDSLLSCSI--------TEVADAN----------------LLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRI 1027 (1049)
Q Consensus 972 ~~~~~~~~~~~~~~--------~~~~~~~----------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp 1027 (1049)
.... ......+. ....... ..............+++++.+++.+||+.||++||
T Consensus 244 -~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rp 321 (339)
T 1z57_A 244 -AMME-RILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRI 321 (339)
T ss_dssp -HHHH-HHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSC
T ss_pred -HHHH-HHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCccccc
Confidence 1100 00000000 0000000 00000000111234577899999999999999999
Q ss_pred CHHHHHHH
Q 039290 1028 SMKDVANR 1035 (1049)
Q Consensus 1028 t~~ell~~ 1035 (1049)
|++|++++
T Consensus 322 t~~ell~h 329 (339)
T 1z57_A 322 TLREALKH 329 (339)
T ss_dssp CHHHHTTS
T ss_pred CHHHHhcC
Confidence 99999976
No 271
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.7e-36 Score=337.67 Aligned_cols=245 Identities=22% Similarity=0.285 Sum_probs=192.9
Q ss_pred HHHHhcCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeecccCC------CHHHHHHHHHHHhhc----CCCceeeEEe
Q 039290 756 LLRATDGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEFDG------SLESFHAECKVMGSI----RHRNLVKIIS 824 (1049)
Q Consensus 756 ~~~~~~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l----~hpniv~l~~ 824 (1049)
.....++|++.+.||+|+||.||+|+. .+++.||+|+++..... ....+.+|+.++.++ +||||+++++
T Consensus 26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~ 105 (312)
T 2iwi_A 26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD 105 (312)
T ss_dssp -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence 334467899999999999999999985 47889999999754321 223456789999988 8999999999
Q ss_pred eeecCCeeEEEEec-cCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeec-CCCceEE
Q 039290 825 SCSNNDFKALVLEY-MSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLN-ESMVGHL 902 (1049)
Q Consensus 825 ~~~~~~~~~lv~e~-~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~-~~~~~kl 902 (1049)
++.+.+..++|||| +.+++|.+++.... .+++.+++.++.|+++||+||| +.||+||||||+||+++ .++.+||
T Consensus 106 ~~~~~~~~~~v~e~~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl 181 (312)
T 2iwi_A 106 WFETQEGFMLVLERPLPAQDLFDYITEKG-PLGEGPSRCFFGQVVAAIQHCH---SRGVVHRDIKDENILIDLRRGCAKL 181 (312)
T ss_dssp EC-----CEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHTEECCCCSGGGEEEETTTTEEEE
T ss_pred EEecCCeEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChhhEEEeCCCCeEEE
Confidence 99999999999999 78999999997654 4899999999999999999999 99999999999999999 8899999
Q ss_pred ecccCceecCCCccccccccccccCcccccccCCCCc-CcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccc
Q 039290 903 SDFGIAKILGKEESMRQTKTLGTIGYMAPEYGREGKV-SRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLL 981 (1049)
Q Consensus 903 ~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 981 (1049)
+|||++....... .....++..|+|||++.+..+ +.++||||+||++|||++|+.||..... ....
T Consensus 182 ~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------~~~~--- 248 (312)
T 2iwi_A 182 IDFGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE-------ILEA--- 248 (312)
T ss_dssp CCCSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-------HHHT---
T ss_pred EEcchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH-------Hhhh---
Confidence 9999998765432 234568999999998877666 4589999999999999999999965210 0000
Q ss_pred cCCcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 982 SCSITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 982 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
....+..++.++.+++.+||+.||++|||++|++++
T Consensus 249 ------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 249 ------------------ELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp ------------------CCCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ------------------ccCCcccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000112245678999999999999999999999985
No 272
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=9e-36 Score=334.95 Aligned_cols=253 Identities=22% Similarity=0.259 Sum_probs=175.1
Q ss_pred hcCCCCCc-eecCCCcEEEEEEEeC-CCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCceeeEEeeeec----CCeeE
Q 039290 760 TDGFSENK-LLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRNLVKIISSCSN----NDFKA 833 (1049)
Q Consensus 760 ~~~~~~~~-~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~----~~~~~ 833 (1049)
.++|.+.+ .||+|+||+||+|+.. +++.||+|++... .....+....++.++||||+++++++.. ....+
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 102 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS----PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLL 102 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEE
Confidence 45788854 6999999999999965 7899999998643 2222333344566799999999999876 45689
Q ss_pred EEEeccCCCChhhhhhcCC-CccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecC---CCceEEecccCce
Q 039290 834 LVLEYMSNGSLEKCLYSDN-YFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNE---SMVGHLSDFGIAK 909 (1049)
Q Consensus 834 lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~---~~~~kl~DfGla~ 909 (1049)
+||||+++|+|.+++.... ..+++.+++.++.|+++||+||| ++||+||||||+||+++. ++.+||+|||++.
T Consensus 103 lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH---~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~ 179 (336)
T 3fhr_A 103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK 179 (336)
T ss_dssp EEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred EEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEEecCCCceEEEeccccce
Confidence 9999999999999998654 36899999999999999999999 999999999999999975 4569999999998
Q ss_pred ecCCCccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhc
Q 039290 910 ILGKEESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVA 989 (1049)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 989 (1049)
...... .....+|+.|+|||++.+..++.++||||+||++|+|++|..||............... +
T Consensus 180 ~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~----------~- 245 (336)
T 3fhr_A 180 ETTQNA---LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRR----------I- 245 (336)
T ss_dssp EC-------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------------
T ss_pred eccccc---cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHh----------h-
Confidence 664322 23456799999999998889999999999999999999999999764322211000000 0
Q ss_pred ccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 039290 990 DANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRL 1036 (1049)
Q Consensus 990 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L 1036 (1049)
..............++.++.+++.+||+.||++|||++|++++-
T Consensus 246 ---~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 289 (336)
T 3fhr_A 246 ---RLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHP 289 (336)
T ss_dssp --------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSH
T ss_pred ---hccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 00000000111123567789999999999999999999999864
No 273
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=7.9e-36 Score=347.10 Aligned_cols=250 Identities=24% Similarity=0.323 Sum_probs=189.5
Q ss_pred CCCCCceecCCCcEEEEEEEeCCCcEEEEEEeecccCCCHHHHHHHHHHHhhc-CCCceeeEEeeeecCCeeEEEEeccC
Q 039290 762 GFSENKLLGMGSFGSVYKGVLPDGMEIAAKVFHMEFDGSLESFHAECKVMGSI-RHRNLVKIISSCSNNDFKALVLEYMS 840 (1049)
Q Consensus 762 ~~~~~~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~~ 840 (1049)
.|...+.||+|+||+||.+...+|+.||||++... ..+.+.+|+++++++ +||||+++++++.+.+..++||||++
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~ 92 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN 92 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC
Confidence 45556889999999998777778999999998754 245678999999887 89999999999999999999999996
Q ss_pred CCChhhhhhcCCCc------cCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCC-------------CceE
Q 039290 841 NGSLEKCLYSDNYF------LDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNES-------------MVGH 901 (1049)
Q Consensus 841 ~g~L~~~l~~~~~~------~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~-------------~~~k 901 (1049)
|+|.+++...... .++..++.++.||+.||+||| +.||+||||||+||+++.+ +.+|
T Consensus 93 -gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~k 168 (434)
T 2rio_A 93 -LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRIL 168 (434)
T ss_dssp -EEHHHHHHTC------------CCHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEE
T ss_pred -CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCcccccccccCCCceEEE
Confidence 5999999765431 123345789999999999999 9999999999999999754 4899
Q ss_pred EecccCceecCCCccc---cccccccccCcccccccCC-------CCcCcccchHHHHHHHHHHHh-CCCCCCccccccc
Q 039290 902 LSDFGIAKILGKEESM---RQTKTLGTIGYMAPEYGRE-------GKVSRKCDVYSYGIMLMETFT-KKKPTDEIFAGEM 970 (1049)
Q Consensus 902 l~DfGla~~~~~~~~~---~~~~~~~~~~y~aPE~~~~-------~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~ 970 (1049)
|+|||++......... ......||+.|+|||++.+ ..++.++||||+||++|||++ |..||......+.
T Consensus 169 L~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~ 248 (434)
T 2rio_A 169 ISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES 248 (434)
T ss_dssp ECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHH
T ss_pred EcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHH
Confidence 9999999987543321 1234578999999999865 578999999999999999999 9999975432221
Q ss_pred hHHHhhhhccccCCcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 971 SLKRWVGDSLLSCSITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 971 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
.. ........ .........++.++.+++.+||+.||++|||+.|+++|
T Consensus 249 ~i---~~~~~~~~--------------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 296 (434)
T 2rio_A 249 NI---IRGIFSLD--------------EMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 296 (434)
T ss_dssp HH---HHTCCCCC--------------CCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HH---hcCCCCcc--------------cccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhC
Confidence 11 11110000 00111124567889999999999999999999999875
No 274
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=9.9e-36 Score=341.10 Aligned_cols=200 Identities=25% Similarity=0.314 Sum_probs=171.0
Q ss_pred HhcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccCCCHHHHHHHHHHHhhcC-CC-----ceeeEEeeeecCCe
Q 039290 759 ATDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFDGSLESFHAECKVMGSIR-HR-----NLVKIISSCSNNDF 831 (1049)
Q Consensus 759 ~~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-hp-----niv~l~~~~~~~~~ 831 (1049)
..++|++.+.||+|+||+||+|+.. +++.||||+++... .....+.+|+++++.++ |+ +|+++++++...+.
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~ 130 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNH 130 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTE
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCc
Confidence 3568999999999999999999965 68899999997432 23456778888888874 44 59999999999999
Q ss_pred eEEEEeccCCCChhhhhhcCC-CccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeec--CCCceEEecccCc
Q 039290 832 KALVLEYMSNGSLEKCLYSDN-YFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLN--ESMVGHLSDFGIA 908 (1049)
Q Consensus 832 ~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~--~~~~~kl~DfGla 908 (1049)
.++||||+++ +|.+++.... ..+++..+..++.|++.|++||| .++.||+||||||+||+++ .++.+||+|||++
T Consensus 131 ~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH-~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a 208 (382)
T 2vx3_A 131 LCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLA-TPELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 208 (382)
T ss_dssp EEEEEECCCC-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHT-STTTCEECCCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred eEEEEecCCC-CHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhc-cCCCCEEcCCCCcccEEEecCCCCcEEEEeccCc
Confidence 9999999964 9999987654 45899999999999999999999 2247899999999999995 4788999999999
Q ss_pred eecCCCccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCcc
Q 039290 909 KILGKEESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEI 965 (1049)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~ 965 (1049)
+..... .....+|+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 209 ~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 209 CQLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp EETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred eecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 876432 23457899999999999999999999999999999999999999864
No 275
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=4e-36 Score=343.87 Aligned_cols=267 Identities=17% Similarity=0.209 Sum_probs=200.5
Q ss_pred hcCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeecccCCCHHHHHHHHHHHhhcC-----------CCceeeEEeeee
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEFDGSLESFHAECKVMGSIR-----------HRNLVKIISSCS 827 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----------hpniv~l~~~~~ 827 (1049)
.++|++.+.||+|+||+||+|+. .+++.||+|++.... ...+.+.+|++++++++ ||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 35799999999999999999995 578999999997432 23467888999998886 899999999987
Q ss_pred cCC----eeEEEEeccCCCChhhhhhcCC-CccCHHHHHHHHHHHHHHHHHhHccCCC-CeEEcCCCCCCeeec------
Q 039290 828 NND----FKALVLEYMSNGSLEKCLYSDN-YFLDILQRLKIMIDVASALEYLHFGYST-PIVHCDIKPSNVLLN------ 895 (1049)
Q Consensus 828 ~~~----~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~Dlkp~NIl~~------ 895 (1049)
..+ ..++||||+ +++|.+++.... ..+++..++.++.||+.||+||| ++ ||+||||||+||+++
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~~ivH~Dikp~NIll~~~~~~~ 172 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMH---RRCGIIHTDIKPENVLMEIVDSPE 172 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECSCCSGGGEEEEEEETTT
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChHHeEEeccCCCc
Confidence 644 789999999 889999987643 45899999999999999999999 87 999999999999994
Q ss_pred CCCceEEecccCceecCCCccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccc-----
Q 039290 896 ESMVGHLSDFGIAKILGKEESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEM----- 970 (1049)
Q Consensus 896 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~----- 970 (1049)
..+.+||+|||++...... .....+|+.|+|||++.+..++.++||||+||++|||++|+.||........
T Consensus 173 ~~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~ 248 (373)
T 1q8y_A 173 NLIQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDD 248 (373)
T ss_dssp TEEEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHH
T ss_pred CcceEEEcccccccccCCC----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHH
Confidence 3458999999999876432 2335689999999999998999999999999999999999999975432111
Q ss_pred hHHHhhhhccc-----------------cC-Ccchhcc---cccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCH
Q 039290 971 SLKRWVGDSLL-----------------SC-SITEVAD---ANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISM 1029 (1049)
Q Consensus 971 ~~~~~~~~~~~-----------------~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~ 1029 (1049)
........... .. ....+.. .............+...+.++.+++.+||+.||++|||+
T Consensus 249 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 328 (373)
T 1q8y_A 249 HIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADA 328 (373)
T ss_dssp HHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCH
T ss_pred HHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCH
Confidence 11111100000 00 0000000 000000111223345678899999999999999999999
Q ss_pred HHHHHH
Q 039290 1030 KDVANR 1035 (1049)
Q Consensus 1030 ~ell~~ 1035 (1049)
+|+++|
T Consensus 329 ~ell~h 334 (373)
T 1q8y_A 329 GGLVNH 334 (373)
T ss_dssp HHHHTC
T ss_pred HHHhhC
Confidence 999986
No 276
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=4.8e-36 Score=336.43 Aligned_cols=254 Identities=26% Similarity=0.270 Sum_probs=179.0
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccC-CCHHHHHHHHH-HHhhcCCCceeeEEeeeecCCeeEEEE
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFD-GSLESFHAECK-VMGSIRHRNLVKIISSCSNNDFKALVL 836 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~-~l~~l~hpniv~l~~~~~~~~~~~lv~ 836 (1049)
.++|+..+.||+|+||.||+|... +++.||+|+++.... ....++..|+. +++.++||||+++++++.+.+..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 467889999999999999999964 789999999976532 22344555555 677789999999999999999999999
Q ss_pred eccCCCChhhhhhc----CCCccCHHHHHHHHHHHHHHHHHhHccCCC-CeEEcCCCCCCeeecCCCceEEecccCceec
Q 039290 837 EYMSNGSLEKCLYS----DNYFLDILQRLKIMIDVASALEYLHFGYST-PIVHCDIKPSNVLLNESMVGHLSDFGIAKIL 911 (1049)
Q Consensus 837 e~~~~g~L~~~l~~----~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~ 911 (1049)
||+++ +|.+++.. ....+++..+..++.|+++|++||| +. ||+||||||+||+++.++.+||+|||++...
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 176 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK---ENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQL 176 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH---HHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHh---ccCCEeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence 99986 88777653 2456899999999999999999999 87 9999999999999999999999999999876
Q ss_pred CCCccccccccccccCccccccc----CCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcch
Q 039290 912 GKEESMRQTKTLGTIGYMAPEYG----REGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITE 987 (1049)
Q Consensus 912 ~~~~~~~~~~~~~~~~y~aPE~~----~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 987 (1049)
.... ......|++.|+|||++ .+..++.++||||+||++|||++|+.||.............
T Consensus 177 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~------------ 242 (327)
T 3aln_A 177 VDSI--AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQV------------ 242 (327)
T ss_dssp -------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCC------------
T ss_pred cccc--ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHH------------
Confidence 4332 22334689999999998 45678999999999999999999999997532111111000
Q ss_pred hcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 988 VADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 988 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
........ .......++..+.+++.+||+.||++|||++|++++
T Consensus 243 -~~~~~~~~---~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 243 -VKGDPPQL---SNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp -CCSCCCCC---CCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred -hcCCCCCC---CCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 00000000 000112245678999999999999999999999886
No 277
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=5.5e-35 Score=354.92 Aligned_cols=345 Identities=20% Similarity=0.231 Sum_probs=207.5
Q ss_pred ccCCCCCCCce----eeeEEEcCCCCcEEEEEEeccccccccCCCCCCcchhhhhhcccCccccccCc-ccccccCCcEe
Q 039290 52 NNWSTTSSVCS----WIGVTCGVRNRRVTALNISYLGLTGTIPPQLGNLSFLAVLAIRNNSFFGSLPE-ELSHLRGLKYF 126 (1049)
Q Consensus 52 ~~w~~~~~~c~----w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~l~~n~~~g~~p~-~~~~L~~L~~L 126 (1049)
++|.++.+||. |.++.|+.. ++-....+. .+..-..++.++.|++++|.+. .+|. .++++++|++|
T Consensus 10 ~~~~~~~~C~~~~~~~~c~~~~~~------i~~~~~~~~--~~~~~l~l~~l~~l~l~~~~l~-~lp~~~~~~l~~L~~L 80 (597)
T 3oja_B 10 KPRQPEYKCIDSNLQYDCVFYDVH------IDMQTQDVY--FGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQVELL 80 (597)
T ss_dssp -CCCSEECCCCC--CCSEEECSCE------ECSSCCCCE--ESCSSGGGCCCSEEEESSCEES-EECTHHHHHCCCCSEE
T ss_pred cCCCCCCcCcccCcCceeEecCce------ecccccccc--cCcccccCCCceEEEeeCCCCC-CcCHHHHccCCCCcEE
Confidence 48988888884 776666421 111111111 1111223456666666666665 3443 34566666666
Q ss_pred ccccCCccccCcccccccCCccEEEeCCCCccCCCcccccCCCcccEEcCCCccCccccCCCcccccccCCCCccceEEe
Q 039290 127 DFRFNNFHIEIPSWFVSLPRLQHLLLKHNSFVGKIPETIGYLSLLQELDLSDNQLSGTIPSSIFNISSCQNLPVLEGLFI 206 (1049)
Q Consensus 127 ~l~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~l~~l~~L~~L~l 206 (1049)
+|++|++.+..|..|+.+++|++|+|++|.+++..|..|+.+++|++|+|++|+++ .+|+.++ .++++|++|+|
T Consensus 81 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~-----~~l~~L~~L~L 154 (597)
T 3oja_B 81 NLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIF-----HNTPKLTTLSM 154 (597)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTT-----TTCTTCCEEEC
T ss_pred ECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCC-CCCHHHh-----ccCCCCCEEEe
Confidence 66666666666666666666666666666666666666666666666666666666 4444331 22344555666
Q ss_pred eccccCCCCCCCcccccccceecccccccccccCCCCccccccceEEeccccccccCccccccccceEEEeeccccCCCc
Q 039290 207 SYNQLTGPIPTNLWKCRELHVVSLAFNKFQGGIPRDIGNLTSVRNLFLGNNSLIGEIPNEIGNLRNLEVLGVQSSNLAGL 286 (1049)
Q Consensus 207 ~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~ 286 (1049)
++|.+++..|..+..+++|+.|+|++|++++. . ++.+++|+.|++++|.+.+.
T Consensus 155 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~------------------------~~~l~~L~~L~l~~n~l~~l 207 (597)
T 3oja_B 155 SNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---D------------------------LSLIPSLFHANVSYNLLSTL 207 (597)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC---C------------------------GGGCTTCSEEECCSSCCSEE
T ss_pred eCCcCCCCChhhhhcCCcCcEEECcCCCCCCc---C------------------------hhhhhhhhhhhcccCccccc
Confidence 65555554444455555555555555544432 1 33344445555555544432
Q ss_pred cccccccccccceEEeccCccCCCCCCcccCCCCCccEEEcCCCCCCCCCCccccCCCCCceeecccCccccCccccccc
Q 039290 287 IPASIFNISTLKELAVTDNDLLGSLPSSIDLGLPNLERLFLGENNFSGTIPSSLTNISELSVLDFGFNSFSGLIPTTFGN 366 (1049)
Q Consensus 287 ~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 366 (1049)
...++|++|++++|.+. .+|..+ .++|+.|+|++|.+++ +..+..+++|+.|+|++|.+.+..|..|+.
T Consensus 208 -----~~~~~L~~L~ls~n~l~-~~~~~~---~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~ 276 (597)
T 3oja_B 208 -----AIPIAVEELDASHNSIN-VVRGPV---NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVK 276 (597)
T ss_dssp -----ECCTTCSEEECCSSCCC-EEECSC---CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTT
T ss_pred -----cCCchhheeeccCCccc-cccccc---CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcC
Confidence 22335666666666654 233222 2577888888888875 366778888888888888888877888888
Q ss_pred ccccceeecccccccCCCCCcccccccccCCCCcEEEccCCccccCCCCccccccccccEEEccCCccccCCCCCCCCCC
Q 039290 367 LRSLKLLSLAGNVLTSPTPDLSFLSSLTSCRNLEIIYLSENPINGILPSSIGNFSISMKSLSMESCNISGGIPKELGNIN 446 (1049)
Q Consensus 367 l~~L~~L~L~~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~~~~l~ 446 (1049)
+++|+.|+|++|.+++++.. +..+++|+.|+|++|.++. +|..+..++
T Consensus 277 l~~L~~L~Ls~N~l~~l~~~------~~~l~~L~~L~Ls~N~l~~--------------------------i~~~~~~l~ 324 (597)
T 3oja_B 277 MQRLERLYISNNRLVALNLY------GQPIPTLKVLDLSHNHLLH--------------------------VERNQPQFD 324 (597)
T ss_dssp CSSCCEEECTTSCCCEEECS------SSCCTTCCEEECCSSCCCC--------------------------CGGGHHHHT
T ss_pred ccCCCEEECCCCCCCCCCcc------cccCCCCcEEECCCCCCCc--------------------------cCcccccCC
Confidence 88888888888888775432 3456667777777776652 333445566
Q ss_pred CccEEEccCCcccccCCccccCcCCCcceEeeccccCC
Q 039290 447 NLTVIRLGNNELTGTIPVTLGRLQKLQGLYLQNNKLEG 484 (1049)
Q Consensus 447 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 484 (1049)
+|+.|+|++|.+++. | +..+++|+.|+|++|.+.+
T Consensus 325 ~L~~L~L~~N~l~~~-~--~~~~~~L~~L~l~~N~~~~ 359 (597)
T 3oja_B 325 RLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDC 359 (597)
T ss_dssp TCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEH
T ss_pred CCCEEECCCCCCCCc-C--hhhcCCCCEEEeeCCCCCC
Confidence 777777777777643 2 5566777777888777764
No 278
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=2.3e-36 Score=337.52 Aligned_cols=242 Identities=23% Similarity=0.301 Sum_probs=200.6
Q ss_pred HhcCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeecccCC------CHHHHHHHHHHHhhcC--CCceeeEEeeeecC
Q 039290 759 ATDGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEFDG------SLESFHAECKVMGSIR--HRNLVKIISSCSNN 829 (1049)
Q Consensus 759 ~~~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~--hpniv~l~~~~~~~ 829 (1049)
..++|++.+.||+|+||.||+|+. .+++.||+|++...... ..+.+.+|+.++++++ ||||+++++++.+.
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~ 120 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 120 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence 456799999999999999999995 57889999999765422 2356778999999996 59999999999999
Q ss_pred CeeEEEEeccCC-CChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeec-CCCceEEecccC
Q 039290 830 DFKALVLEYMSN-GSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLN-ESMVGHLSDFGI 907 (1049)
Q Consensus 830 ~~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~-~~~~~kl~DfGl 907 (1049)
+..++|||++.+ ++|.+++.... .+++..++.++.|+++||+||| +.||+||||||+||+++ .++.+||+|||+
T Consensus 121 ~~~~lv~e~~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~ 196 (320)
T 3a99_A 121 DSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGS 196 (320)
T ss_dssp SEEEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTT
T ss_pred CcEEEEEEcCCCCccHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCcEeCCCCHHHEEEeCCCCCEEEeeCcc
Confidence 999999999986 89999987644 4899999999999999999999 99999999999999999 789999999999
Q ss_pred ceecCCCccccccccccccCcccccccCCCCc-CcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcc
Q 039290 908 AKILGKEESMRQTKTLGTIGYMAPEYGREGKV-SRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSIT 986 (1049)
Q Consensus 908 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 986 (1049)
+....... .....||+.|+|||++.+..+ +.++||||+||++|||++|+.||..... ......
T Consensus 197 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-------~~~~~~------ 260 (320)
T 3a99_A 197 GALLKDTV---YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-------IIRGQV------ 260 (320)
T ss_dssp CEECCSSC---BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-------HHHCCC------
T ss_pred cccccccc---ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh-------hhcccc------
Confidence 98765432 233568999999999877665 6889999999999999999999965210 000000
Q ss_pred hhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 987 EVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 987 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
..+..++.++.+++.+||+.||++|||++|++++
T Consensus 261 ---------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 261 ---------------FFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp ---------------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ---------------cccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0011235678999999999999999999999875
No 279
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=9.8e-36 Score=337.62 Aligned_cols=264 Identities=20% Similarity=0.247 Sum_probs=197.6
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccCC--CHHHHHHHHHHHhhcCCCceeeEEeeeecCCe-----
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFDG--SLESFHAECKVMGSIRHRNLVKIISSCSNNDF----- 831 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~----- 831 (1049)
.++|...+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|+.++++++||||+++++++...+.
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 357889999999999999999964 7899999999764322 24678899999999999999999999987654
Q ss_pred -eEEEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCcee
Q 039290 832 -KALVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKI 910 (1049)
Q Consensus 832 -~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~ 910 (1049)
.++||||++ ++|.+++.. .+++.+++.++.|+++||+||| ++||+||||||+||+++.++.+||+|||++..
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGL---KFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred eEEEEecccc-CCHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEeECCCCcEEEeecccccC
Confidence 499999997 588887643 3899999999999999999999 99999999999999999999999999999986
Q ss_pred cCCCccccccccccccCcccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhcccc--CCcch
Q 039290 911 LGKEESMRQTKTLGTIGYMAPEYGRE-GKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLS--CSITE 987 (1049)
Q Consensus 911 ~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~ 987 (1049)
.... .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||......+. ........... .....
T Consensus 176 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~ 250 (353)
T 3coi_A 176 ADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ-LTQILKVTGVPGTEFVQK 250 (353)
T ss_dssp ------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHH-HHHHHHHHCBCCHHHHTT
T ss_pred CCCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCCHHHHHH
Confidence 5332 233568999999998876 6789999999999999999999999976332211 11111000000 00000
Q ss_pred hcc-------cccccccccC-chhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 988 VAD-------ANLLNCEEND-FSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 988 ~~~-------~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
+.+ ..+....... ......++.++.+++.+|++.||++|||++|+++|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 251 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp CSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 000 0000000000 11112456789999999999999999999999976
No 280
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.4e-36 Score=347.19 Aligned_cols=249 Identities=22% Similarity=0.333 Sum_probs=190.4
Q ss_pred cCCCCCceecCCCcEEEEEEEeCCCcEEEEEEeecccCCCHHHHHHHHHHHhhc-CCCceeeEEeeeecCCeeEEEEecc
Q 039290 761 DGFSENKLLGMGSFGSVYKGVLPDGMEIAAKVFHMEFDGSLESFHAECKVMGSI-RHRNLVKIISSCSNNDFKALVLEYM 839 (1049)
Q Consensus 761 ~~~~~~~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~ 839 (1049)
.+|...++||+|+||+||.....+++.||||++.... ...+.+|+++++++ +|||||++++++.+.+..++||||+
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~ 100 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC 100 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT---EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECC
Confidence 4588889999999999765556689999999986432 23467899999999 7999999999999999999999999
Q ss_pred CCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecC-----CCceEEecccCceecCCC
Q 039290 840 SNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNE-----SMVGHLSDFGIAKILGKE 914 (1049)
Q Consensus 840 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~-----~~~~kl~DfGla~~~~~~ 914 (1049)
+ |+|.+++........+.+++.++.||++||+||| +.||+||||||+||+++. ...+||+|||+++.....
T Consensus 101 ~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~ 176 (432)
T 3p23_A 101 A-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVG 176 (432)
T ss_dssp S-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHH---HTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC---
T ss_pred C-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHH---HCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCC
Confidence 6 5999999877665666677899999999999999 999999999999999953 336889999999876533
Q ss_pred cc--ccccccccccCcccccccC---CCCcCcccchHHHHHHHHHHHh-CCCCCCccccccchHHHhhhhccccCCcchh
Q 039290 915 ES--MRQTKTLGTIGYMAPEYGR---EGKVSRKCDVYSYGIMLMETFT-KKKPTDEIFAGEMSLKRWVGDSLLSCSITEV 988 (1049)
Q Consensus 915 ~~--~~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 988 (1049)
.. .......||+.|+|||++. ...++.++||||+||++|||++ |..||........ ....... .
T Consensus 177 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~--~~~~~~~----~---- 246 (432)
T 3p23_A 177 RHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA--NILLGAC----S---- 246 (432)
T ss_dssp ---------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHH--HHHTTCC----C----
T ss_pred CcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHH--HHHhccC----C----
Confidence 21 2233467999999999987 4567889999999999999999 8999864322111 1110000 0
Q ss_pred cccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 989 ADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 989 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
..........+..+.+++.+||+.||++|||++|+++|
T Consensus 247 ---------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~h 284 (432)
T 3p23_A 247 ---------LDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKH 284 (432)
T ss_dssp ---------CTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ---------ccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence 00001112345668899999999999999999999965
No 281
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=4.7e-35 Score=336.85 Aligned_cols=336 Identities=19% Similarity=0.227 Sum_probs=243.6
Q ss_pred cccccceEEeccCccCCCCCCcccCCCCCccEEEcCCCCCCCCCCccccCCCCCceeecccCccccCcccccccccccce
Q 039290 293 NISTLKELAVTDNDLLGSLPSSIDLGLPNLERLFLGENNFSGTIPSSLTNISELSVLDFGFNSFSGLIPTTFGNLRSLKL 372 (1049)
Q Consensus 293 ~l~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 372 (1049)
.+++++.|++++|.+. .+|..++..+++|++|+|++|++++..+..|..+++|++|++++|.+.+..|..|+++++|++
T Consensus 43 ~l~~l~~l~l~~~~l~-~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 121 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTV 121 (390)
T ss_dssp GGCCCSEEEEESCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred ccCCceEEEecCCchh-hCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCE
Confidence 4567778888877765 566666666777888888888777666667777777777888777777776777777777777
Q ss_pred eecccccccCCCCCcccccccccCCCCcEEEccCCccccCCCCccccccccccEEEccCCccccCCCCCCCCCCCccEEE
Q 039290 373 LSLAGNVLTSPTPDLSFLSSLTSCRNLEIIYLSENPINGILPSSIGNFSISMKSLSMESCNISGGIPKELGNINNLTVIR 452 (1049)
Q Consensus 373 L~L~~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~ 452 (1049)
|++++|.++.++... +..+++|++|++++|.+++ ..|..+.++++|++|+
T Consensus 122 L~L~~n~l~~l~~~~-----~~~l~~L~~L~L~~n~l~~-------------------------~~~~~~~~l~~L~~L~ 171 (390)
T 3o6n_A 122 LVLERNDLSSLPRGI-----FHNTPKLTTLSMSNNNLER-------------------------IEDDTFQATTSLQNLQ 171 (390)
T ss_dssp EECCSSCCCCCCTTT-----TTTCTTCCEEECCSSCCCB-------------------------CCTTTTSSCTTCCEEE
T ss_pred EECCCCccCcCCHHH-----hcCCCCCcEEECCCCccCc-------------------------cChhhccCCCCCCEEE
Confidence 777777777665542 4555666666666655554 4455566667777777
Q ss_pred ccCCcccccCCccccCcCCCcceEeeccccCCCCCcccccccccceEEeeCcccCCcCchhccCcccCCceeecCccccc
Q 039290 453 LGNNELTGTIPVTLGRLQKLQGLYLQNNKLEGSIPEDLCHLYRLANLYLGDNKLSGRLPACLGNLTSLRDLSLGSNALTS 532 (1049)
Q Consensus 453 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 532 (1049)
+++|.+++. .++.+++|+.|++++|.+++ +....+|++|++++|.+.. +|.. ..++|+.|++++|++++
T Consensus 172 l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~-----~~~~~~L~~L~l~~n~l~~-~~~~--~~~~L~~L~l~~n~l~~ 240 (390)
T 3o6n_A 172 LSSNRLTHV---DLSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINV-VRGP--VNVELTILKLQHNNLTD 240 (390)
T ss_dssp CCSSCCSBC---CGGGCTTCSEEECCSSCCSE-----EECCSSCSEEECCSSCCCE-EECC--CCSSCCEEECCSSCCCC
T ss_pred CCCCcCCcc---ccccccccceeecccccccc-----cCCCCcceEEECCCCeeee-cccc--ccccccEEECCCCCCcc
Confidence 777777643 24556677777777777653 2334567777777777763 3432 24677888888888876
Q ss_pred ccCcccccccccccccccCCccCCCCccCcCCCcceeEeecccccccccccccccCCCcccEEEeecccccCCccccccC
Q 039290 533 IIPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALSGVIPVTIGGLQGLQLLSLRYNRLQGPIPESFGG 612 (1049)
Q Consensus 533 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 612 (1049)
. ..+..+++|++|++++|.+++..|..+..+++|++|+|++|++++ +|..+..+++|+.|+|++|+++ .+|..+..
T Consensus 241 ~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~ 316 (390)
T 3o6n_A 241 T--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQ 316 (390)
T ss_dssp C--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHH
T ss_pred c--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccc
Confidence 3 467777888888888888887777788888888888888888885 5667788899999999999999 56777888
Q ss_pred ccCCcEEeccCccccCCcccccccccccceeeccCCcccccCCCCCCccccccccccCCccccCCC
Q 039290 613 LKSLNFVDMSNNNLSGTIPKSMEALSYLKHLNLSFNQLEGEIPTRGPFITFSAESFLGNQALCGSP 678 (1049)
Q Consensus 613 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~cg~~ 678 (1049)
+++|++|+|++|+++. +| +..+++|+.|++++|+|.|.+.. ..+..+....+.+++..|+.+
T Consensus 317 l~~L~~L~L~~N~i~~-~~--~~~~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~c~~~ 378 (390)
T 3o6n_A 317 FDRLENLYLDHNSIVT-LK--LSTHHTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKID 378 (390)
T ss_dssp HTTCSEEECCSSCCCC-CC--CCTTCCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCSCCCTT
T ss_pred cCcCCEEECCCCccce-eC--chhhccCCEEEcCCCCccchhHH-HHHHHHHhhcccccCceeccc
Confidence 9999999999999984 44 77888999999999999986543 223344555677787888765
No 282
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=5.9e-36 Score=334.38 Aligned_cols=252 Identities=23% Similarity=0.256 Sum_probs=183.2
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccCC--CHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEE
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFDG--SLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVL 836 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 836 (1049)
.++|+..+.||+|+||.||+|+.. +++.||+|++...... ..+.+.++..+++.++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 457888999999999999999965 7899999999765322 1233445556778889999999999999999999999
Q ss_pred eccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCC-CeEEcCCCCCCeeecCCCceEEecccCceecCCCc
Q 039290 837 EYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYST-PIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEE 915 (1049)
Q Consensus 837 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~ 915 (1049)
||+ ++.+..+.......+++..++.++.|+++|++||| ++ ||+||||||+||+++.++.+||+|||++.......
T Consensus 104 e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLK---EKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK 179 (318)
T ss_dssp CCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HHHCCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred ecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc
Confidence 999 55666666554556899999999999999999999 85 99999999999999999999999999997664332
Q ss_pred cccccccccccCcccccccC-----CCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhcc
Q 039290 916 SMRQTKTLGTIGYMAPEYGR-----EGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVAD 990 (1049)
Q Consensus 916 ~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1049)
......+++.|+|||++. ...++.++||||+||++|||++|+.||..................
T Consensus 180 --~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~---------- 247 (318)
T 2dyl_A 180 --AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEP---------- 247 (318)
T ss_dssp ---------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCC----------
T ss_pred --cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCC----------
Confidence 223356899999999984 456889999999999999999999999753222221111111000
Q ss_pred cccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 039290 991 ANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANR 1035 (1049)
Q Consensus 991 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~ 1035 (1049)
...+....++.++.+++.+||+.||.+|||++|++++
T Consensus 248 --------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 248 --------PLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp --------CCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred --------CCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 0000111245678999999999999999999999986
No 283
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=1.8e-35 Score=335.95 Aligned_cols=265 Identities=19% Similarity=0.223 Sum_probs=199.8
Q ss_pred hcCCCCCceecCCCcEEEEEEEeC-CC-cEEEEEEeecccCCCHHHHHHHHHHHhhcCCCc------eeeEEeeeecCCe
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLP-DG-MEIAAKVFHMEFDGSLESFHAECKVMGSIRHRN------LVKIISSCSNNDF 831 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~-~~-~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpn------iv~l~~~~~~~~~ 831 (1049)
.++|++.+.||+|+||+||+|+.. ++ +.||+|+++.. ....+.+.+|+++++.++|++ ++.+++++...+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 467999999999999999999964 44 68999999643 233567888999999997665 9999999999999
Q ss_pred eEEEEeccCCCChhhhhhcCC-CccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeee----------------
Q 039290 832 KALVLEYMSNGSLEKCLYSDN-YFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLL---------------- 894 (1049)
Q Consensus 832 ~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~---------------- 894 (1049)
.++||||+ ++++.+++.... ..+++.+++.++.||++||+||| ++||+||||||+||++
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~ 172 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSCE 172 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEESCCCEEEEECCC-CCC
T ss_pred EEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeccccccccccccccc
Confidence 99999999 556666665543 46899999999999999999999 9999999999999999
Q ss_pred ---cCCCceEEecccCceecCCCccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccch
Q 039290 895 ---NESMVGHLSDFGIAKILGKEESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMS 971 (1049)
Q Consensus 895 ---~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~ 971 (1049)
+.++.+||+|||++....... ....||+.|+|||++.+..++.++||||+||++|||++|..||......+..
T Consensus 173 ~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~ 248 (355)
T 2eu9_A 173 EKSVKNTSIRVADFGSATFDHEHH----TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 248 (355)
T ss_dssp EEEESCCCEEECCCTTCEETTSCC----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred ccccCCCcEEEeecCccccccccc----cCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 567899999999998654322 3457899999999999989999999999999999999999999764322111
Q ss_pred HHHhhhhccccCCc--------chhccc-c------------c---ccccccCchhhHHHHHHHHHHHhhccccCCCCCC
Q 039290 972 LKRWVGDSLLSCSI--------TEVADA-N------------L---LNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRI 1027 (1049)
Q Consensus 972 ~~~~~~~~~~~~~~--------~~~~~~-~------------~---~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp 1027 (1049)
.. ........+. ...... . . ..............+.++.+++.+||+.||++||
T Consensus 249 -~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rp 326 (355)
T 2eu9_A 249 -VM-MEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRI 326 (355)
T ss_dssp -HH-HHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSC
T ss_pred -HH-HHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCc
Confidence 10 0000000000 000000 0 0 0000000011123456899999999999999999
Q ss_pred CHHHHHHH
Q 039290 1028 SMKDVANR 1035 (1049)
Q Consensus 1028 t~~ell~~ 1035 (1049)
|++|+++|
T Consensus 327 t~~e~l~h 334 (355)
T 2eu9_A 327 TLAEALLH 334 (355)
T ss_dssp CHHHHTTS
T ss_pred CHHHHhcC
Confidence 99999875
No 284
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=9.2e-35 Score=352.96 Aligned_cols=335 Identities=19% Similarity=0.228 Sum_probs=246.7
Q ss_pred ccccceEEeccCccCCCCCCcccCCCCCccEEEcCCCCCCCCCCccccCCCCCceeecccCccccCccccccccccccee
Q 039290 294 ISTLKELAVTDNDLLGSLPSSIDLGLPNLERLFLGENNFSGTIPSSLTNISELSVLDFGFNSFSGLIPTTFGNLRSLKLL 373 (1049)
Q Consensus 294 l~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 373 (1049)
+++++.|++++|.+. .+|..++..+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|+++++|++|
T Consensus 50 l~~l~~l~l~~~~l~-~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 50 LNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 128 (597)
T ss_dssp GCCCSEEEESSCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCceEEEeeCCCCC-CcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEE
Confidence 566777777777765 5666665567777777777777776666677777777777777777777666667777777777
Q ss_pred ecccccccCCCCCcccccccccCCCCcEEEccCCccccCCCCccccccccccEEEccCCccccCCCCCCCCCCCccEEEc
Q 039290 374 SLAGNVLTSPTPDLSFLSSLTSCRNLEIIYLSENPINGILPSSIGNFSISMKSLSMESCNISGGIPKELGNINNLTVIRL 453 (1049)
Q Consensus 374 ~L~~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L 453 (1049)
+|++|.|+.+++.. |..+++|++|+|++|.++ +..|..|+++++|++|+|
T Consensus 129 ~L~~n~l~~l~~~~-----~~~l~~L~~L~Ls~N~l~-------------------------~~~~~~~~~l~~L~~L~L 178 (597)
T 3oja_B 129 VLERNDLSSLPRGI-----FHNTPKLTTLSMSNNNLE-------------------------RIEDDTFQATTSLQNLQL 178 (597)
T ss_dssp ECCSSCCCCCCTTT-----TTTCTTCCEEECCSSCCC-------------------------BCCTTTTTTCTTCCEEEC
T ss_pred EeeCCCCCCCCHHH-----hccCCCCCEEEeeCCcCC-------------------------CCChhhhhcCCcCcEEEC
Confidence 77777776655432 445555555555555554 455556667777777777
Q ss_pred cCCcccccCCccccCcCCCcceEeeccccCCCCCcccccccccceEEeeCcccCCcCchhccCcccCCceeecCcccccc
Q 039290 454 GNNELTGTIPVTLGRLQKLQGLYLQNNKLEGSIPEDLCHLYRLANLYLGDNKLSGRLPACLGNLTSLRDLSLGSNALTSI 533 (1049)
Q Consensus 454 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 533 (1049)
++|.+++. .++.+++|+.|++++|.+++ +....+|+.|++++|.++. +|..+ .++|+.|+|++|.+++
T Consensus 179 ~~N~l~~~---~~~~l~~L~~L~l~~n~l~~-----l~~~~~L~~L~ls~n~l~~-~~~~~--~~~L~~L~L~~n~l~~- 246 (597)
T 3oja_B 179 SSNRLTHV---DLSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINV-VRGPV--NVELTILKLQHNNLTD- 246 (597)
T ss_dssp TTSCCSBC---CGGGCTTCSEEECCSSCCSE-----EECCTTCSEEECCSSCCCE-EECSC--CSCCCEEECCSSCCCC-
T ss_pred cCCCCCCc---ChhhhhhhhhhhcccCcccc-----ccCCchhheeeccCCcccc-ccccc--CCCCCEEECCCCCCCC-
Confidence 77777753 24556777777777777763 3344567777888877763 33322 2578888888888876
Q ss_pred cCcccccccccccccccCCccCCCCccCcCCCcceeEeecccccccccccccccCCCcccEEEeecccccCCccccccCc
Q 039290 534 IPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALSGVIPVTIGGLQGLQLLSLRYNRLQGPIPESFGGL 613 (1049)
Q Consensus 534 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 613 (1049)
+..+..+++|+.|+|++|.+++..|..|+.+++|++|+|++|++++ +|..+..+++|+.|+|++|+++ .+|..+..+
T Consensus 247 -~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l 323 (597)
T 3oja_B 247 -TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQF 323 (597)
T ss_dssp -CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHH
T ss_pred -ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccC
Confidence 3677788888888888888888778888888888888999988886 5777788999999999999999 578888999
Q ss_pred cCCcEEeccCccccCCcccccccccccceeeccCCcccccCCCCCCccccccccccCCccccCCC
Q 039290 614 KSLNFVDMSNNNLSGTIPKSMEALSYLKHLNLSFNQLEGEIPTRGPFITFSAESFLGNQALCGSP 678 (1049)
Q Consensus 614 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~cg~~ 678 (1049)
++|++|+|++|++++. | +..+++|+.|++++|+|.|.++. ..+..+....+.++...|+.+
T Consensus 324 ~~L~~L~L~~N~l~~~-~--~~~~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~C~~~ 384 (597)
T 3oja_B 324 DRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKID 384 (597)
T ss_dssp TTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCCCCCTT
T ss_pred CCCCEEECCCCCCCCc-C--hhhcCCCCEEEeeCCCCCChhHH-HHHHHHhhhccccccccCCcc
Confidence 9999999999999854 3 67788999999999999998643 234455566678888899875
No 285
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=1.6e-35 Score=352.55 Aligned_cols=272 Identities=25% Similarity=0.303 Sum_probs=202.7
Q ss_pred hcCCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeeccc-CCCHHHHHHHHHHHhhcCCCceeeEEeeeec------CCe
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEF-DGSLESFHAECKVMGSIRHRNLVKIISSCSN------NDF 831 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~------~~~ 831 (1049)
.++|++.+.||+|+||.||+|.. .+|+.||+|+++... ....+.+.+|++++++++||||+++++++.. .+.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 36899999999999999999996 478999999987543 2235678899999999999999999998765 677
Q ss_pred eEEEEeccCCCChhhhhhcCCC--ccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCc---eEEeccc
Q 039290 832 KALVLEYMSNGSLEKCLYSDNY--FLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMV---GHLSDFG 906 (1049)
Q Consensus 832 ~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~---~kl~DfG 906 (1049)
.++||||+++|+|.+++..... .+++..++.++.|++.|++||| +.||+||||||+||+++.++. +||+|||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLH---s~gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHH---HTTBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 8999999999999999986442 5888999999999999999999 999999999999999996654 9999999
Q ss_pred CceecCCCccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcc
Q 039290 907 IAKILGKEESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSIT 986 (1049)
Q Consensus 907 la~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 986 (1049)
++....... ......||+.|+|||++.+..++.++||||+||++|||++|..||..... ...|...........
T Consensus 170 ~a~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~----~~~~~~~i~~~~~~~ 243 (676)
T 3qa8_A 170 YAKELDQGE--LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ----PVQWHGKVREKSNEH 243 (676)
T ss_dssp CCCBTTSCC--CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH----HHHSSTTCC------
T ss_pred ccccccccc--ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc----hhhhhhhhhcccchh
Confidence 998765433 22345789999999999999999999999999999999999999965321 122222111111000
Q ss_pred hhccccccc------ccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHH-----HHHHHHHH
Q 039290 987 EVADANLLN------CEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDV-----ANRLVRIR 1040 (1049)
Q Consensus 987 ~~~~~~~~~------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~el-----l~~L~~i~ 1040 (1049)
......... ............+..+.+++.+|+++||++|||++|+ .+.++++.
T Consensus 244 ~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL 308 (676)
T 3qa8_A 244 IVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSIL 308 (676)
T ss_dssp CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHH
T ss_pred hhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHH
Confidence 000000000 0000111223467889999999999999999999984 44455444
No 286
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=6.1e-35 Score=324.35 Aligned_cols=255 Identities=33% Similarity=0.566 Sum_probs=234.8
Q ss_pred cccEEEccCCcccc--CCCCCCCCCCCccEEEccC-CcccccCCccccCcCCCcceEeeccccCCCCCcccccccccceE
Q 039290 423 SMKSLSMESCNISG--GIPKELGNINNLTVIRLGN-NELTGTIPVTLGRLQKLQGLYLQNNKLEGSIPEDLCHLYRLANL 499 (1049)
Q Consensus 423 ~L~~L~L~~n~i~~--~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 499 (1049)
+++.|+|++|++++ .+|..|.++++|++|+|++ |.+++.+|..|+.+++|++|+|++|++++.+|..+..+++|++|
T Consensus 51 ~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 130 (313)
T 1ogq_A 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTL 130 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEE
T ss_pred eEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEE
Confidence 67778888888887 7888899999999999995 99998899999999999999999999998899999999999999
Q ss_pred EeeCcccCCcCchhccCcccCCceeecCcccccccCccccccc-ccccccccCCccCCCCccCcCCCcceeEeecccccc
Q 039290 500 YLGDNKLSGRLPACLGNLTSLRDLSLGSNALTSIIPSTLWNLK-DILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNAL 578 (1049)
Q Consensus 500 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 578 (1049)
++++|.+++.+|..++++++|++|++++|++++.+|..+..++ +|++|++++|++++.+|..+..++ |++|++++|++
T Consensus 131 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l 209 (313)
T 1ogq_A 131 DFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNML 209 (313)
T ss_dssp ECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEE
T ss_pred eCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcc
Confidence 9999999988999999999999999999999988999999988 899999999999988899998887 99999999999
Q ss_pred cccccccccCCCcccEEEeecccccCCccccccCccCCcEEeccCccccCCcccccccccccceeeccCCcccccCCCCC
Q 039290 579 SGVIPVTIGGLQGLQLLSLRYNRLQGPIPESFGGLKSLNFVDMSNNNLSGTIPKSMEALSYLKHLNLSFNQLEGEIPTRG 658 (1049)
Q Consensus 579 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~ 658 (1049)
++..|..|..+++|+.|+|++|++++.+|. +..+++|++|+|++|++++.+|..+..+++|+.|++++|+++|.+|...
T Consensus 210 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~ 288 (313)
T 1ogq_A 210 EGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGG 288 (313)
T ss_dssp EECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCST
T ss_pred cCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCc
Confidence 999999999999999999999999977666 8889999999999999999999999999999999999999999999988
Q ss_pred CccccccccccCCccccCCCC
Q 039290 659 PFITFSAESFLGNQALCGSPK 679 (1049)
Q Consensus 659 ~~~~~~~~~~~~n~~~cg~~~ 679 (1049)
.+..+....+.+|+++||.|.
T Consensus 289 ~l~~L~~l~l~~N~~lc~~p~ 309 (313)
T 1ogq_A 289 NLQRFDVSAYANNKCLCGSPL 309 (313)
T ss_dssp TGGGSCGGGTCSSSEEESTTS
T ss_pred cccccChHHhcCCCCccCCCC
Confidence 888888899999999999874
No 287
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=2.2e-34 Score=315.33 Aligned_cols=232 Identities=12% Similarity=0.047 Sum_probs=186.3
Q ss_pred cCCCCCceecCCCcEEEEEEEeC-CCcEEEEEEeecccCCC---HHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEEE
Q 039290 761 DGFSENKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFDGS---LESFHAECKVMGSIRHRNLVKIISSCSNNDFKALVL 836 (1049)
Q Consensus 761 ~~~~~~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 836 (1049)
++|++.+.||+|+||.||+|+.. +++.||+|++....... .+.+.+|++++++++||||+++++++.+.+..|+||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 57999999999999999999975 58999999997654332 367899999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCcc
Q 039290 837 EYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEES 916 (1049)
Q Consensus 837 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~~ 916 (1049)
||+++++|.+++... ....++.+++.|+++||+||| ++||+||||||+||+++.++.+||+++|
T Consensus 111 e~~~g~~L~~~l~~~---~~~~~~~~i~~ql~~aL~~lH---~~givH~Dikp~NIll~~~g~~kl~~~~---------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAAH---RAGVALSIDHPSRVRVSIDGDVVLAYPA---------- 174 (286)
T ss_dssp ECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEETTSCEEECSCC----------
T ss_pred EecCCCCHHHHHhcC---CChHHHHHHHHHHHHHHHHHH---HCCCccCCCCcccEEEcCCCCEEEEecc----------
Confidence 999999999998543 356678899999999999999 9999999999999999999999997543
Q ss_pred ccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhcccccccc
Q 039290 917 MRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLLNC 996 (1049)
Q Consensus 917 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1049)
|++ .++.++||||+||++|||++|+.||......+..... .......
T Consensus 175 -----------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~---------------~~~~~~~ 221 (286)
T 3uqc_A 175 -----------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA---------------ERDTAGQ 221 (286)
T ss_dssp -----------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC---------------CBCTTSC
T ss_pred -----------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH---------------HHHhccC
Confidence 333 3688999999999999999999999763322110000 0000000
Q ss_pred cccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHh
Q 039290 997 EENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRLVRIRET 1042 (1049)
Q Consensus 997 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L~~i~~~ 1042 (1049)
..........++.++.+++.+||+.||++| |++|+++.|+++...
T Consensus 222 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~ 266 (286)
T 3uqc_A 222 PIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAV 266 (286)
T ss_dssp BCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC-
T ss_pred CCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhcc
Confidence 000011123456789999999999999999 999999999988754
No 288
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.6e-33 Score=318.69 Aligned_cols=307 Identities=23% Similarity=0.368 Sum_probs=224.4
Q ss_pred cccccccceEEeccCccCCCCCCcccCCCCCccEEEcCCCCCCCCCCccccCCCCCceeecccCccccCccccccccccc
Q 039290 291 IFNISTLKELAVTDNDLLGSLPSSIDLGLPNLERLFLGENNFSGTIPSSLTNISELSVLDFGFNSFSGLIPTTFGNLRSL 370 (1049)
Q Consensus 291 ~~~l~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 370 (1049)
+..+++|++|++++|.+. .+|. ...+++|++|++++|++++. +. +..+++|++|++++|.+... ..|..+++|
T Consensus 40 ~~~l~~L~~L~l~~~~i~-~~~~--~~~~~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L 112 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVA-SIQG--IEYLTNLEYLNLNGNQITDI-SP-LSNLVKLTNLYIGTNKITDI--SALQNLTNL 112 (347)
T ss_dssp HHHHTTCSEEECCSSCCC-CCTT--GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCC--GGGTTCTTC
T ss_pred chhcccccEEEEeCCccc-cchh--hhhcCCccEEEccCCccccc-hh-hhcCCcCCEEEccCCcccCc--hHHcCCCcC
Confidence 345667777777777765 3443 23466777777777777643 32 66667777777777766643 246666666
Q ss_pred ceeecccccccCCCCCcccccccccCCCCcEEEccCCccccCCCCccccccccccEEEccCCccccCCCCCCCCCCCccE
Q 039290 371 KLLSLAGNVLTSPTPDLSFLSSLTSCRNLEIIYLSENPINGILPSSIGNFSISMKSLSMESCNISGGIPKELGNINNLTV 450 (1049)
Q Consensus 371 ~~L~L~~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~~~~l~~L~~ 450 (1049)
++|++++|.++.+++ +..+++|+.|++++|... ..+ ..+..+++|++
T Consensus 113 ~~L~l~~n~i~~~~~-------~~~l~~L~~L~l~~n~~~-------------------------~~~-~~~~~l~~L~~ 159 (347)
T 4fmz_A 113 RELYLNEDNISDISP-------LANLTKMYSLNLGANHNL-------------------------SDL-SPLSNMTGLNY 159 (347)
T ss_dssp SEEECTTSCCCCCGG-------GTTCTTCCEEECTTCTTC-------------------------CCC-GGGTTCTTCCE
T ss_pred CEEECcCCcccCchh-------hccCCceeEEECCCCCCc-------------------------ccc-cchhhCCCCcE
Confidence 666666666655332 445555555555555432 222 23667778888
Q ss_pred EEccCCcccccCCccccCcCCCcceEeeccccCCCCCcccccccccceEEeeCcccCCcCchhccCcccCCceeecCccc
Q 039290 451 IRLGNNELTGTIPVTLGRLQKLQGLYLQNNKLEGSIPEDLCHLYRLANLYLGDNKLSGRLPACLGNLTSLRDLSLGSNAL 530 (1049)
Q Consensus 451 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 530 (1049)
|++++|.+++..+ +..+++|++|++++|++.+. +. +..+++|+.|++++|.+++..+ +..+++|++|++++|++
T Consensus 160 L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l 233 (347)
T 4fmz_A 160 LTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDI-SP-LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKI 233 (347)
T ss_dssp EECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCC-GG-GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCC
T ss_pred EEecCCCcCCchh--hccCCCCCEEEccCCccccc-cc-ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCcc
Confidence 8888888775433 77788888888888888743 33 7778888888888888875443 77888888888888888
Q ss_pred ccccCcccccccccccccccCCccCCCCccCcCCCcceeEeecccccccccccccccCCCcccEEEeecccccCCccccc
Q 039290 531 TSIIPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALSGVIPVTIGGLQGLQLLSLRYNRLQGPIPESF 610 (1049)
Q Consensus 531 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 610 (1049)
++..+ +..+++|++|++++|.+++. +.+..+++|++|++++|++++. ..+..+++|+.|++++|++++..|..|
T Consensus 234 ~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l 307 (347)
T 4fmz_A 234 TDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVI 307 (347)
T ss_dssp CCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHH
T ss_pred CCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHh
Confidence 87554 77888888888888888763 5688888999999999999865 468889999999999999998889999
Q ss_pred cCccCCcEEeccCccccCCcccccccccccceeeccCCccc
Q 039290 611 GGLKSLNFVDMSNNNLSGTIPKSMEALSYLKHLNLSFNQLE 651 (1049)
Q Consensus 611 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~N~l~ 651 (1049)
+++++|++|+|++|++++..| +..+++|++|++++|+++
T Consensus 308 ~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 308 GGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp HTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred hccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 999999999999999997666 888999999999999875
No 289
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=7.4e-34 Score=314.14 Aligned_cols=231 Identities=21% Similarity=0.300 Sum_probs=181.7
Q ss_pred cCCCCC-ceecCCCcEEEEEEEe-CCCcEEEEEEeecccCCCHHHHHHHHHHH-hhcCCCceeeEEeeeec----CCeeE
Q 039290 761 DGFSEN-KLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEFDGSLESFHAECKVM-GSIRHRNLVKIISSCSN----NDFKA 833 (1049)
Q Consensus 761 ~~~~~~-~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l-~~l~hpniv~l~~~~~~----~~~~~ 833 (1049)
++|.+. +.||+|+||.||+|.. .+++.||+|+++.. ..+.+|++++ +..+||||+++++++.. .+..+
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 91 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 91 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence 456666 7899999999999996 57899999998642 5678899888 55589999999999876 67789
Q ss_pred EEEeccCCCChhhhhhcCC-CccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecC---CCceEEecccCce
Q 039290 834 LVLEYMSNGSLEKCLYSDN-YFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNE---SMVGHLSDFGIAK 909 (1049)
Q Consensus 834 lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~---~~~~kl~DfGla~ 909 (1049)
+||||+++|+|.+++.... ..+++.+++.++.|++.||+||| +.||+||||||+||+++. ++.+||+|||++.
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 168 (299)
T 3m2w_A 92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 168 (299)
T ss_dssp EEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEecCCCCCcEEEecccccc
Confidence 9999999999999998754 36899999999999999999999 999999999999999997 7899999999987
Q ss_pred ecCCCccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhc
Q 039290 910 ILGKEESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVA 989 (1049)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 989 (1049)
... +..++.++||||+||++|||++|..||......+.... ..
T Consensus 169 ~~~-----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~--------------~~ 211 (299)
T 3m2w_A 169 ETT-----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG--------------MK 211 (299)
T ss_dssp ECT-----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CC--------------SC
T ss_pred ccc-----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHH--------------HH
Confidence 532 13567899999999999999999999975322111000 00
Q ss_pred ccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 039290 990 DANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVANRL 1036 (1049)
Q Consensus 990 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~~L 1036 (1049)
.................++.++.+++.+||+.||++|||++|+++|-
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp 258 (299)
T 3m2w_A 212 TRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP 258 (299)
T ss_dssp CSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred HHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcCh
Confidence 00000000001111134567899999999999999999999999873
No 290
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=2.2e-34 Score=332.64 Aligned_cols=248 Identities=17% Similarity=0.181 Sum_probs=186.9
Q ss_pred CCCCCceecCCCcEEEEEEEe-CCCcEEEEEEeecccC---CCHHHHHHHHHHHhhcCC-Cceee---------------
Q 039290 762 GFSENKLLGMGSFGSVYKGVL-PDGMEIAAKVFHMEFD---GSLESFHAECKVMGSIRH-RNLVK--------------- 821 (1049)
Q Consensus 762 ~~~~~~~lg~G~fg~Vy~a~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h-pniv~--------------- 821 (1049)
.|...+.||+|+||+||+|++ .+|+.||||+++.... ...+.+.+|+.+++.++| ++...
T Consensus 79 ~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 158 (413)
T 3dzo_A 79 TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVK 158 (413)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEE
T ss_pred eEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcc
Confidence 467778999999999999994 5799999999874332 235789999999999976 22111
Q ss_pred ------EEeeeec-----CCeeEEEEeccCCCChhhhhh------cCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEE
Q 039290 822 ------IISSCSN-----NDFKALVLEYMSNGSLEKCLY------SDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVH 884 (1049)
Q Consensus 822 ------l~~~~~~-----~~~~~lv~e~~~~g~L~~~l~------~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH 884 (1049)
++.++.. ....+++|+++ +++|.+++. .....+++..++.++.|+++||+||| ++||+|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~iiH 234 (413)
T 3dzo_A 159 DPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGLVH 234 (413)
T ss_dssp CCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTEEC
T ss_pred cCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH---hCCccc
Confidence 1111111 12356777776 579999884 33456888899999999999999999 999999
Q ss_pred cCCCCCCeeecCCCceEEecccCceecCCCccccccccccccCccccccc----------CCCCcCcccchHHHHHHHHH
Q 039290 885 CDIKPSNVLLNESMVGHLSDFGIAKILGKEESMRQTKTLGTIGYMAPEYG----------REGKVSRKCDVYSYGIMLME 954 (1049)
Q Consensus 885 ~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~----------~~~~~~~~~DvwslG~il~e 954 (1049)
|||||+|||++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++||||+||++||
T Consensus 235 rDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~e 309 (413)
T 3dzo_A 235 TYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYW 309 (413)
T ss_dssp SCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHH
T ss_pred CCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHH
Confidence 999999999999999999999999875432 334567 999999998 55678899999999999999
Q ss_pred HHhCCCCCCccccccchHHHhhhhccccCCcchhcccccccccccCchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 039290 955 TFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRISMKDVAN 1034 (1049)
Q Consensus 955 lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ell~ 1034 (1049)
|++|+.||......+... .+ .... ..+++++.+++.+||+.||++|||+.|+++
T Consensus 310 lltg~~Pf~~~~~~~~~~--------------~~----~~~~--------~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 310 IWCADLPNTDDAALGGSE--------------WI----FRSC--------KNIPQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp HHHSSCCCCTTGGGSCSG--------------GG----GSSC--------CCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHCCCCCCCcchhhhHH--------------HH----Hhhc--------ccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 999999997532221100 00 0000 123467899999999999999999999987
Q ss_pred H--HHHHHHhhh
Q 039290 1035 R--LVRIRETLS 1044 (1049)
Q Consensus 1035 ~--L~~i~~~~~ 1044 (1049)
+ ++++.+.+.
T Consensus 364 ~~~~~~~~~~~~ 375 (413)
T 3dzo_A 364 TPEYEQLRTELS 375 (413)
T ss_dssp SHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 6 565555543
No 291
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.1e-34 Score=353.09 Aligned_cols=242 Identities=21% Similarity=0.312 Sum_probs=196.1
Q ss_pred cCCCCCceecCCCcEEEEEEEeC--CCcEEEEEEeecccC-CCHHHHHHHHHHHhhcCCCceeeEEeeeecCCe-----e
Q 039290 761 DGFSENKLLGMGSFGSVYKGVLP--DGMEIAAKVFHMEFD-GSLESFHAECKVMGSIRHRNLVKIISSCSNNDF-----K 832 (1049)
Q Consensus 761 ~~~~~~~~lg~G~fg~Vy~a~~~--~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~-----~ 832 (1049)
++|++.+.||+|+||+||+|.+. +++.||||++..... ...+.+.+|++++++++||||+++++++.+.+. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 67999999999999999999965 689999999865432 234578899999999999999999999987655 6
Q ss_pred EEEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecC
Q 039290 833 ALVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILG 912 (1049)
Q Consensus 833 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~ 912 (1049)
|+||||+++++|.+++.. .+++.+++.++.||++||+||| ++||+||||||+||+++.+ .+||+|||+++...
T Consensus 160 ~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH---~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~ 232 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLH---SIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRIN 232 (681)
T ss_dssp EEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSS-CEEECCCTTCEETT
T ss_pred EEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHH---HCCCeecccChHHeEEeCC-cEEEEecccchhcc
Confidence 999999999999987654 5899999999999999999999 9999999999999999986 89999999998764
Q ss_pred CCccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCccccccchHHHhhhhccccCCcchhcccc
Q 039290 913 KEESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADAN 992 (1049)
Q Consensus 913 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 992 (1049)
.. ....||+.|+|||++.+. ++.++|||||||++|||++|..||........
T Consensus 233 ~~-----~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~---------------------- 284 (681)
T 2pzi_A 233 SF-----GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDGL---------------------- 284 (681)
T ss_dssp CC-----SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSSC----------------------
T ss_pred cC-----CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccccccc----------------------
Confidence 33 335689999999988664 48899999999999999999888764211100
Q ss_pred cccccccCchhhHHHHHHHHHHHhhccccCCCCCC-CHHHHHHHHHHHHHhh
Q 039290 993 LLNCEENDFSAREQCVSSIFSLAMDCTVDLPEKRI-SMKDVANRLVRIRETL 1043 (1049)
Q Consensus 993 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-t~~ell~~L~~i~~~~ 1043 (1049)
. ........+..+.+++.+||+.||++|| +++++.+.+..+.++.
T Consensus 285 ----~--~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~ 330 (681)
T 2pzi_A 285 ----P--EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLREV 330 (681)
T ss_dssp ----C--TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHHHH
T ss_pred ----c--ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHHHh
Confidence 0 0011123456789999999999999999 5677777777766543
No 292
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=7.8e-33 Score=313.14 Aligned_cols=308 Identities=25% Similarity=0.402 Sum_probs=249.5
Q ss_pred ccccccceEEEeeccccCCCccccccccccccceEEeccCccCCCCCCcccCCCCCccEEEcCCCCCCCCCCccccCCCC
Q 039290 266 EIGNLRNLEVLGVQSSNLAGLIPASIFNISTLKELAVTDNDLLGSLPSSIDLGLPNLERLFLGENNFSGTIPSSLTNISE 345 (1049)
Q Consensus 266 ~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 345 (1049)
.+..+++|+.|++++|.+... | .+..+++|++|++++|++.+ +|. +..+++|++|++++|.+++ +| .+..+++
T Consensus 39 ~~~~l~~L~~L~l~~~~i~~~-~-~~~~~~~L~~L~l~~n~i~~-~~~--~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~ 111 (347)
T 4fmz_A 39 TQEELESITKLVVAGEKVASI-Q-GIEYLTNLEYLNLNGNQITD-ISP--LSNLVKLTNLYIGTNKITD-IS-ALQNLTN 111 (347)
T ss_dssp CHHHHTTCSEEECCSSCCCCC-T-TGGGCTTCCEEECCSSCCCC-CGG--GTTCTTCCEEECCSSCCCC-CG-GGTTCTT
T ss_pred cchhcccccEEEEeCCccccc-h-hhhhcCCccEEEccCCcccc-chh--hhcCCcCCEEEccCCcccC-ch-HHcCCCc
Confidence 467899999999999999865 4 48899999999999999984 554 5589999999999999985 44 6999999
Q ss_pred CceeecccCccccCcccccccccccceeecccccccCCCCCcccccccccCCCCcEEEccCCccccCCCCcccccccccc
Q 039290 346 LSVLDFGFNSFSGLIPTTFGNLRSLKLLSLAGNVLTSPTPDLSFLSSLTSCRNLEIIYLSENPINGILPSSIGNFSISMK 425 (1049)
Q Consensus 346 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~~~~~L~ 425 (1049)
|++|++++|.+.+..+ +..+++|++|++++|...... ..+..+++|++|++++|.+.+..+
T Consensus 112 L~~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~------~~~~~l~~L~~L~l~~~~~~~~~~----------- 172 (347)
T 4fmz_A 112 LRELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDL------SPLSNMTGLNYLTVTESKVKDVTP----------- 172 (347)
T ss_dssp CSEEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCC------GGGTTCTTCCEEECCSSCCCCCGG-----------
T ss_pred CCEEECcCCcccCchh--hccCCceeEEECCCCCCcccc------cchhhCCCCcEEEecCCCcCCchh-----------
Confidence 9999999999997643 899999999999999654422 236778888888888887764321
Q ss_pred EEEccCCccccCCCCCCCCCCCccEEEccCCcccccCCccccCcCCCcceEeeccccCCCCCcccccccccceEEeeCcc
Q 039290 426 SLSMESCNISGGIPKELGNINNLTVIRLGNNELTGTIPVTLGRLQKLQGLYLQNNKLEGSIPEDLCHLYRLANLYLGDNK 505 (1049)
Q Consensus 426 ~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 505 (1049)
+..+++|++|++++|.+++..+ +..+++|+.|++++|++++..+ +..+++|++|++++|+
T Consensus 173 ----------------~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~ 232 (347)
T 4fmz_A 173 ----------------IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNK 232 (347)
T ss_dssp ----------------GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSC
T ss_pred ----------------hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCc
Confidence 5566777777777777774333 7777888888888888775433 7777888888888888
Q ss_pred cCCcCchhccCcccCCceeecCcccccccCcccccccccccccccCCccCCCCccCcCCCcceeEeeccccccccccccc
Q 039290 506 LSGRLPACLGNLTSLRDLSLGSNALTSIIPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALSGVIPVT 585 (1049)
Q Consensus 506 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 585 (1049)
+++..+ +..+++|++|++++|++++. ..+..+++|++|++++|++++. +.+..+++|++|++++|++++..|..
T Consensus 233 l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~ 306 (347)
T 4fmz_A 233 ITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEV 306 (347)
T ss_dssp CCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHH
T ss_pred cCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhH
Confidence 875433 77888888888888888874 4677888888888888888874 46888899999999999999999999
Q ss_pred ccCCCcccEEEeecccccCCccccccCccCCcEEeccCcccc
Q 039290 586 IGGLQGLQLLSLRYNRLQGPIPESFGGLKSLNFVDMSNNNLS 627 (1049)
Q Consensus 586 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 627 (1049)
|+.+++|+.|+|++|++++..| +..+++|++||+++|+|+
T Consensus 307 l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 307 IGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp HHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred hhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 9999999999999999998777 889999999999999986
No 293
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=5.8e-32 Score=303.67 Aligned_cols=288 Identities=24% Similarity=0.312 Sum_probs=172.2
Q ss_pred ccceEEeccCccCCCCCCcccCCCCCccEEEcCCCCCCCCCCccccCCCCCceeecccCccccCcccccccccccceeec
Q 039290 296 TLKELAVTDNDLLGSLPSSIDLGLPNLERLFLGENNFSGTIPSSLTNISELSVLDFGFNSFSGLIPTTFGNLRSLKLLSL 375 (1049)
Q Consensus 296 ~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 375 (1049)
+++.+++++|.+. .+|..++ ++|+.|++++|++++..|..|.++++|++|++++|++++..|..|+++++|++|++
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~---~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 109 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS---PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYI 109 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC---TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEEC
T ss_pred cCCEEECCCCCcc-ccCCCCC---CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEEC
Confidence 5677777777765 5666543 56777777777777655666777777777777777777666666666666666666
Q ss_pred ccccccCCCCCcccccccccCCCCcEEEccCCccccCCCCccccccccccEEEccCCccccCCCCCCCCCCCccEEEccC
Q 039290 376 AGNVLTSPTPDLSFLSSLTSCRNLEIIYLSENPINGILPSSIGNFSISMKSLSMESCNISGGIPKELGNINNLTVIRLGN 455 (1049)
Q Consensus 376 ~~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~ 455 (1049)
++|.++.++... . .+|++|++++|++++..+..|.++++|+.|++++
T Consensus 110 ~~n~l~~l~~~~------------------------------~---~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~ 156 (332)
T 2ft3_A 110 SKNHLVEIPPNL------------------------------P---SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGG 156 (332)
T ss_dssp CSSCCCSCCSSC------------------------------C---TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCS
T ss_pred CCCcCCccCccc------------------------------c---ccCCEEECCCCccCccCHhHhCCCccCCEEECCC
Confidence 666665544321 1 1444444444444444444566677777777777
Q ss_pred Ccccc--cCCccccCcCCCcceEeeccccCCCCCcccccccccceEEeeCcccCCcCchhccCcccCCceeecCcccccc
Q 039290 456 NELTG--TIPVTLGRLQKLQGLYLQNNKLEGSIPEDLCHLYRLANLYLGDNKLSGRLPACLGNLTSLRDLSLGSNALTSI 533 (1049)
Q Consensus 456 N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 533 (1049)
|.++. ..|..+..+ +|++|++++|++++ +|..+. ++ |++|++++|++++.
T Consensus 157 n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~------------------------L~~L~l~~n~i~~~ 208 (332)
T 2ft3_A 157 NPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ET------------------------LNELHLDHNKIQAI 208 (332)
T ss_dssp CCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SS------------------------CSCCBCCSSCCCCC
T ss_pred CccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CC------------------------CCEEECCCCcCCcc
Confidence 77752 555666666 66666666666663 343332 34 44455555555544
Q ss_pred cCcccccccccccccccCCccCCCCccCcCCCcceeEeecccccccccccccccCCCcccEEEeecccccCCccccccCc
Q 039290 534 IPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALSGVIPVTIGGLQGLQLLSLRYNRLQGPIPESFGGL 613 (1049)
Q Consensus 534 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 613 (1049)
.|..+..+++|++|++++|++++..+..+..+++|++|+|++|+++ .+|..+..+++|+.|++++|+|++..+..|...
T Consensus 209 ~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~ 287 (332)
T 2ft3_A 209 ELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPV 287 (332)
T ss_dssp CTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCS
T ss_pred CHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHcccc
Confidence 4445555555555555555555544445555555566666666665 455556666666666666666666555555443
Q ss_pred ------cCCcEEeccCcccc--CCcccccccccccceeeccCCc
Q 039290 614 ------KSLNFVDMSNNNLS--GTIPKSMEALSYLKHLNLSFNQ 649 (1049)
Q Consensus 614 ------~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~l~l~~N~ 649 (1049)
.+|+.|++++|++. +..|..+..+++|+.+++++|+
T Consensus 288 ~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 288 GFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp SCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred ccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 45677777777766 4566667777777777777664
No 294
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=6.6e-32 Score=303.22 Aligned_cols=297 Identities=25% Similarity=0.304 Sum_probs=229.3
Q ss_pred cceEEEeeccccCCCccccccccccccceEEeccCccCCCCCCcccCCCCCccEEEcCCCCCCCCCCccccCCCCCceee
Q 039290 271 RNLEVLGVQSSNLAGLIPASIFNISTLKELAVTDNDLLGSLPSSIDLGLPNLERLFLGENNFSGTIPSSLTNISELSVLD 350 (1049)
Q Consensus 271 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 350 (1049)
.+++.++++++.+.. +|..+. ++|+.|++++|++.+..|.. +..+++|++|+|++|++++..|..|+++++|++|+
T Consensus 33 c~l~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~i~~~~~~~-~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 108 (332)
T 2ft3_A 33 CHLRVVQCSDLGLKA-VPKEIS--PDTTLLDLQNNDISELRKDD-FKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLY 108 (332)
T ss_dssp EETTEEECCSSCCSS-CCSCCC--TTCCEEECCSSCCCEECTTT-TTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEE
T ss_pred ccCCEEECCCCCccc-cCCCCC--CCCeEEECCCCcCCccCHhH-hhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEE
Confidence 478999999999884 566553 68999999999998544444 45899999999999999988899999999999999
Q ss_pred cccCccccCcccccccccccceeecccccccCCCCCcccccccccCCCCcEEEccCCccccCCCCccccccccccEEEcc
Q 039290 351 FGFNSFSGLIPTTFGNLRSLKLLSLAGNVLTSPTPDLSFLSSLTSCRNLEIIYLSENPINGILPSSIGNFSISMKSLSME 430 (1049)
Q Consensus 351 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~~~~~L~~L~L~ 430 (1049)
+++|++.. +|..+. ++|++|++++|.++.+++. .+..+++|+.|++++|.++.
T Consensus 109 L~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~-----~~~~l~~L~~L~l~~n~l~~------------------- 161 (332)
T 2ft3_A 109 ISKNHLVE-IPPNLP--SSLVELRIHDNRIRKVPKG-----VFSGLRNMNCIEMGGNPLEN------------------- 161 (332)
T ss_dssp CCSSCCCS-CCSSCC--TTCCEEECCSSCCCCCCSG-----GGSSCSSCCEEECCSCCCBG-------------------
T ss_pred CCCCcCCc-cCcccc--ccCCEEECCCCccCccCHh-----HhCCCccCCEEECCCCcccc-------------------
Confidence 99999995 455554 8999999999999887654 26667777777777776642
Q ss_pred CCccccCCCCCCCCCCCccEEEccCCcccccCCccccCcCCCcceEeeccccCCCCCcccccccccceEEeeCcccCCcC
Q 039290 431 SCNISGGIPKELGNINNLTVIRLGNNELTGTIPVTLGRLQKLQGLYLQNNKLEGSIPEDLCHLYRLANLYLGDNKLSGRL 510 (1049)
Q Consensus 431 ~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 510 (1049)
.+..|..+..+ +|++|++++|++++ +|..+. ++|++|++++|++++..+..+..+++|+.|++++|++++..
T Consensus 162 ----~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~ 233 (332)
T 2ft3_A 162 ----SGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIE 233 (332)
T ss_dssp ----GGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCC
T ss_pred ----CCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCC
Confidence 13677888888 99999999999995 666554 79999999999999877788888888888888888888777
Q ss_pred chhccCcccCCceeecCcccccccCcccccccccccccccCCccCCCCccCcCCCcceeEeecccccccccccccccCCC
Q 039290 511 PACLGNLTSLRDLSLGSNALTSIIPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALSGVIPVTIGGLQ 590 (1049)
Q Consensus 511 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 590 (1049)
+..+..+++|++|++++|+++. +|..+..+++|++|++++|++++..+..|.... + -....
T Consensus 234 ~~~~~~l~~L~~L~L~~N~l~~-lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~----------------~--~~~~~ 294 (332)
T 2ft3_A 234 NGSLSFLPTLRELHLDNNKLSR-VPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVG----------------F--GVKRA 294 (332)
T ss_dssp TTGGGGCTTCCEEECCSSCCCB-CCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSS----------------C--CSSSC
T ss_pred hhHhhCCCCCCEEECCCCcCee-cChhhhcCccCCEEECCCCCCCccChhHccccc----------------c--ccccc
Confidence 7778888888888888888874 566677777777777777777655444443211 0 01135
Q ss_pred cccEEEeeccccc--CCccccccCccCCcEEeccCcc
Q 039290 591 GLQLLSLRYNRLQ--GPIPESFGGLKSLNFVDMSNNN 625 (1049)
Q Consensus 591 ~L~~L~Ls~N~l~--~~~~~~~~~l~~L~~L~Ls~N~ 625 (1049)
.|+.|++++|.+. +..|..|..+++|+.+++++|+
T Consensus 295 ~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 295 YYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred cccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 6777888888776 5677778888888888888774
No 295
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=1e-33 Score=318.72 Aligned_cols=245 Identities=16% Similarity=0.171 Sum_probs=186.2
Q ss_pred hcCCCCCceecCCCcEEEEEEEeCCCcEEEEEEeecccC--------CCHHHHHHHHHHHhhcC---------CCceeeE
Q 039290 760 TDGFSENKLLGMGSFGSVYKGVLPDGMEIAAKVFHMEFD--------GSLESFHAECKVMGSIR---------HRNLVKI 822 (1049)
Q Consensus 760 ~~~~~~~~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~---------hpniv~l 822 (1049)
.++|++.+.||+|+||+||+|+. +|+.||||+++.... ...+.+.+|+++++.++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 35688899999999999999998 789999999976532 23478899999999886 6666655
Q ss_pred Eee-----------------eec-------------CCeeEEEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHH
Q 039290 823 ISS-----------------CSN-------------NDFKALVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALE 872 (1049)
Q Consensus 823 ~~~-----------------~~~-------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ 872 (1049)
.++ +.+ .+..++||||+++|++.+.+.. ..+++.+++.++.||+.||+
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL~ 175 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTASLA 175 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHHHH
Confidence 554 333 6789999999999976666643 35799999999999999999
Q ss_pred HhHccCCCCeEEcCCCCCCeeecCCC--------------------ceEEecccCceecCCCccccccccccccCccccc
Q 039290 873 YLHFGYSTPIVHCDIKPSNVLLNESM--------------------VGHLSDFGIAKILGKEESMRQTKTLGTIGYMAPE 932 (1049)
Q Consensus 873 ~LH~~~~~~ivH~Dlkp~NIl~~~~~--------------------~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE 932 (1049)
|||+ ++||+||||||+|||++.++ .+||+|||+|+..... ..+||+.|+|||
T Consensus 176 ~lH~--~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~y~aPE 247 (336)
T 2vuw_A 176 VAEA--SLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDVSMDED 247 (336)
T ss_dssp HHHH--HHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCCTTCSG
T ss_pred HHHH--hCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeecccChh
Confidence 9992 37899999999999999876 8999999999876432 347899999999
Q ss_pred ccCCCCcCcccchHHHHHH-HHHHHhCCCCCCccccccchHHHhhhhccccCCcchhcccccccccccCchhhHHHHHHH
Q 039290 933 YGREGKVSRKCDVYSYGIM-LMETFTKKKPTDEIFAGEMSLKRWVGDSLLSCSITEVADANLLNCEENDFSAREQCVSSI 1011 (1049)
Q Consensus 933 ~~~~~~~~~~~DvwslG~i-l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1011 (1049)
++.+.. +.++||||+|++ .+++++|..||... .|..... ..+.... ..............++++
T Consensus 248 ~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~--------~~~~~~~-----~~~~~~~-~~~~~~~~~~~~~~s~~~ 312 (336)
T 2vuw_A 248 LFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNV--------LWLHYLT-----DKMLKQM-TFKTKCNTPAMKQIKRKI 312 (336)
T ss_dssp GGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH--------HHHHHHH-----HHHHHTC-CCSSCCCSHHHHHHHHHH
T ss_pred hhcCCC-ccceehhhhhCCCCcccccccCCCcch--------hhhhHHH-----Hhhhhhh-ccCcccchhhhhhcCHHH
Confidence 998765 899999998777 77889999998541 1100000 0000000 000111223445688899
Q ss_pred HHHHhhccccCCCCCCCHHHHH-HH
Q 039290 1012 FSLAMDCTVDLPEKRISMKDVA-NR 1035 (1049)
Q Consensus 1012 ~~li~~cl~~dP~~Rpt~~ell-~~ 1035 (1049)
.+++.+||+.| |++|++ +|
T Consensus 313 ~dli~~~L~~d-----sa~e~l~~H 332 (336)
T 2vuw_A 313 QEFHRTMLNFS-----SATDLLCQH 332 (336)
T ss_dssp HHHHHHGGGSS-----SHHHHHHHC
T ss_pred HHHHHHHhccC-----CHHHHHhcC
Confidence 99999999976 999998 64
No 296
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.98 E-value=1.1e-31 Score=301.12 Aligned_cols=288 Identities=21% Similarity=0.282 Sum_probs=173.0
Q ss_pred ccceEEeccCccCCCCCCcccCCCCCccEEEcCCCCCCCCCCccccCCCCCceeecccCccccCcccccccccccceeec
Q 039290 296 TLKELAVTDNDLLGSLPSSIDLGLPNLERLFLGENNFSGTIPSSLTNISELSVLDFGFNSFSGLIPTTFGNLRSLKLLSL 375 (1049)
Q Consensus 296 ~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 375 (1049)
+++.++++++.+. .+|..+. ++|+.|+|++|++++..+..|.++++|++|++++|.+++..|..|+++++|++|++
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~---~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP---PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC---TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCeEEEecCCCcc-ccCccCC---CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEEC
Confidence 5667777777665 5665543 57788888888888766667888888888888888888777777888888888887
Q ss_pred ccccccCCCCCcccccccccCCCCcEEEccCCccccCCCCccccccccccEEEccCCccccCCCCCCCCCCCccEEEccC
Q 039290 376 AGNVLTSPTPDLSFLSSLTSCRNLEIIYLSENPINGILPSSIGNFSISMKSLSMESCNISGGIPKELGNINNLTVIRLGN 455 (1049)
Q Consensus 376 ~~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~ 455 (1049)
++|.++.++... .++|++| ++++|.+++..+..|.++++|++|++++
T Consensus 108 s~n~l~~l~~~~--------~~~L~~L-------------------------~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 154 (330)
T 1xku_A 108 SKNQLKELPEKM--------PKTLQEL-------------------------RVHENEITKVRKSVFNGLNQMIVVELGT 154 (330)
T ss_dssp CSSCCSBCCSSC--------CTTCCEE-------------------------ECCSSCCCBBCHHHHTTCTTCCEEECCS
T ss_pred CCCcCCccChhh--------cccccEE-------------------------ECCCCcccccCHhHhcCCccccEEECCC
Confidence 777776654431 0334444 4444444444444556666777777777
Q ss_pred Ccccc--cCCccccCcCCCcceEeeccccCCCCCcccccccccceEEeeCcccCCcCchhccCcccCCceeecCcccccc
Q 039290 456 NELTG--TIPVTLGRLQKLQGLYLQNNKLEGSIPEDLCHLYRLANLYLGDNKLSGRLPACLGNLTSLRDLSLGSNALTSI 533 (1049)
Q Consensus 456 N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 533 (1049)
|.++. ..+..+..+++|++|++++|+++ .+|..+. ++|++|++++|++++..|..+.++++|++|++++|++++.
T Consensus 155 n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~ 231 (330)
T 1xku_A 155 NPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAV 231 (330)
T ss_dssp SCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEE
T ss_pred CcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCcee
Confidence 76643 45566666677777777777666 3444333 5566666666666655556666666666666666666655
Q ss_pred cCcccccccccccccccCCccCCCCccCcCCCcceeEeecccccccccccccccCCCcccEEEeecccccCCccccccC-
Q 039290 534 IPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALSGVIPVTIGGLQGLQLLSLRYNRLQGPIPESFGG- 612 (1049)
Q Consensus 534 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~- 612 (1049)
.+..+..+++|++|++++|+++ .+|..+..+++|+.|+|++|+|++..+..|..
T Consensus 232 ~~~~~~~l~~L~~L~L~~N~l~-------------------------~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~ 286 (330)
T 1xku_A 232 DNGSLANTPHLRELHLNNNKLV-------------------------KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPP 286 (330)
T ss_dssp CTTTGGGSTTCCEEECCSSCCS-------------------------SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCS
T ss_pred ChhhccCCCCCCEEECCCCcCc-------------------------cCChhhccCCCcCEEECCCCcCCccChhhcCCc
Confidence 5555555555555555555554 33344444444444444444444444444432
Q ss_pred -----ccCCcEEeccCccccC--CcccccccccccceeeccCC
Q 039290 613 -----LKSLNFVDMSNNNLSG--TIPKSMEALSYLKHLNLSFN 648 (1049)
Q Consensus 613 -----l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~l~l~~N 648 (1049)
...|+.|++++|++.. ..|..+..+.+++.++|++|
T Consensus 287 ~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N 329 (330)
T 1xku_A 287 GYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNY 329 (330)
T ss_dssp SCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC---
T ss_pred ccccccccccceEeecCcccccccCccccccccceeEEEeccc
Confidence 2455556666665542 34445555666666666655
No 297
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.98 E-value=3.2e-31 Score=297.42 Aligned_cols=289 Identities=24% Similarity=0.308 Sum_probs=186.1
Q ss_pred ccceecccccccccccCCCCccccccceEEeccccccccCccccccccceEEEeeccccCCCccccccccccccceEEec
Q 039290 224 ELHVVSLAFNKFQGGIPRDIGNLTSVRNLFLGNNSLIGEIPNEIGNLRNLEVLGVQSSNLAGLIPASIFNISTLKELAVT 303 (1049)
Q Consensus 224 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~ 303 (1049)
++++++++++.++ .+|..+. +++++|+|++|++++..+..|+++++|++|+|++|++++..|..+.++++|++|+++
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 4555555555554 3454443 466677777777776555567777777777777777777667777777777777777
Q ss_pred cCccCCCCCCcccCCCCCccEEEcCCCCCCCCCCccccCCCCCceeecccCcccc--Ccccccccccccceeeccccccc
Q 039290 304 DNDLLGSLPSSIDLGLPNLERLFLGENNFSGTIPSSLTNISELSVLDFGFNSFSG--LIPTTFGNLRSLKLLSLAGNVLT 381 (1049)
Q Consensus 304 ~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~ 381 (1049)
+|++. .+|..++ ++|++|++++|++++..+..+.++++|++|++++|.+.. ..+..|.++++|++|++++|.++
T Consensus 109 ~n~l~-~l~~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~ 184 (330)
T 1xku_A 109 KNQLK-ELPEKMP---KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT 184 (330)
T ss_dssp SSCCS-BCCSSCC---TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC
T ss_pred CCcCC-ccChhhc---ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc
Confidence 77776 5666554 678888888888887777778888888888888888853 56677777888888888888777
Q ss_pred CCCCCcccccccccCCCCcEEEccCCccccCCCCccccccccccEEEccCCccccCCCCCCCCCCCccEEEccCCccccc
Q 039290 382 SPTPDLSFLSSLTSCRNLEIIYLSENPINGILPSSIGNFSISMKSLSMESCNISGGIPKELGNINNLTVIRLGNNELTGT 461 (1049)
Q Consensus 382 ~~~~~~~~l~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 461 (1049)
.++... .++|++|++++|++++ ..|..|..+++|++|+|++|.+++.
T Consensus 185 ~l~~~~--------~~~L~~L~l~~n~l~~-------------------------~~~~~~~~l~~L~~L~Ls~n~l~~~ 231 (330)
T 1xku_A 185 TIPQGL--------PPSLTELHLDGNKITK-------------------------VDAASLKGLNNLAKLGLSFNSISAV 231 (330)
T ss_dssp SCCSSC--------CTTCSEEECTTSCCCE-------------------------ECTGGGTTCTTCCEEECCSSCCCEE
T ss_pred cCCccc--------cccCCEEECCCCcCCc-------------------------cCHHHhcCCCCCCEEECCCCcCcee
Confidence 655432 1445555555555544 4444555555666666666666655
Q ss_pred CCccccCcCCCcceEeeccccCCCCCcccccccccceEEeeCcccCCcCchhccC------cccCCceeecCccccc--c
Q 039290 462 IPVTLGRLQKLQGLYLQNNKLEGSIPEDLCHLYRLANLYLGDNKLSGRLPACLGN------LTSLRDLSLGSNALTS--I 533 (1049)
Q Consensus 462 ~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~------l~~L~~L~L~~N~l~~--~ 533 (1049)
.+..+..+++|++|+|++|+++ .+|..+..+++|++|++++|++++..+..|.. .+.|+.|++++|.+.. +
T Consensus 232 ~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i 310 (330)
T 1xku_A 232 DNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEI 310 (330)
T ss_dssp CTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGS
T ss_pred ChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCccccccc
Confidence 5555666666666666666665 45555666666666666666666544444432 2556677777776653 4
Q ss_pred cCcccccccccccccccCCc
Q 039290 534 IPSTLWNLKDILRFNLSSNS 553 (1049)
Q Consensus 534 ~p~~~~~l~~L~~L~Ls~N~ 553 (1049)
.|..|..+.+++.++|++|+
T Consensus 311 ~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 311 QPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp CGGGGTTCCCGGGEEC----
T ss_pred CccccccccceeEEEecccC
Confidence 55667777777777777764
No 298
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=1.2e-35 Score=350.35 Aligned_cols=385 Identities=20% Similarity=0.171 Sum_probs=217.0
Q ss_pred ccceEEeccccccccCccc-cccccceEEEeeccccCCC----ccccccccccccceEEeccCccCCCCCCcccCCCC--
Q 039290 248 SVRNLFLGNNSLIGEIPNE-IGNLRNLEVLGVQSSNLAG----LIPASIFNISTLKELAVTDNDLLGSLPSSIDLGLP-- 320 (1049)
Q Consensus 248 ~L~~L~L~~N~l~~~~p~~-l~~l~~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~l~-- 320 (1049)
+|++|||++|+++...... +..+++|++|+|++|++.+ .++..+..+++|++|++++|.+....+..+...++
T Consensus 4 ~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~ 83 (461)
T 1z7x_W 4 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 83 (461)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred cceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhC
Confidence 4455555555544322222 4445555555555555543 23444444555555555555554322222222333
Q ss_pred --CccEEEcCCCCCCC----CCCccccCCCCCceeecccCccccCcccccc-----cccccceeecccccccCCCCCccc
Q 039290 321 --NLERLFLGENNFSG----TIPSSLTNISELSVLDFGFNSFSGLIPTTFG-----NLRSLKLLSLAGNVLTSPTPDLSF 389 (1049)
Q Consensus 321 --~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-----~l~~L~~L~L~~N~l~~~~~~~~~ 389 (1049)
+|++|+|++|+++. .++..+..+++|++|++++|.+.+..+..+. ..++|++|++++|.++..... ..
T Consensus 84 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~-~l 162 (461)
T 1z7x_W 84 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCE-PL 162 (461)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHH-HH
T ss_pred CCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHH-HH
Confidence 57777777777773 4577777788888888888887654333332 245677777777776643211 01
Q ss_pred ccccccCCCCcEEEccCCccccCCCCccccccccccEEEccCCccccCCCCCCCCCCCccEEEccCCccccc----CCcc
Q 039290 390 LSSLTSCRNLEIIYLSENPINGILPSSIGNFSISMKSLSMESCNISGGIPKELGNINNLTVIRLGNNELTGT----IPVT 465 (1049)
Q Consensus 390 l~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~ 465 (1049)
...+..+++|+.|++++|.+....+..+..... ...++|++|+|++|.+++. ++..
T Consensus 163 ~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~--------------------~~~~~L~~L~L~~n~l~~~~~~~l~~~ 222 (461)
T 1z7x_W 163 ASVLRAKPDFKELTVSNNDINEAGVRVLCQGLK--------------------DSPCQLEALKLESCGVTSDNCRDLCGI 222 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHH--------------------HSCCCCCEEECTTSCCBTTHHHHHHHH
T ss_pred HHHHhhCCCCCEEECcCCCcchHHHHHHHHHHh--------------------cCCCCceEEEccCCCCcHHHHHHHHHH
Confidence 223455677777777777765432222211000 0123455555555555432 2444
Q ss_pred ccCcCCCcceEeeccccCCCC-----CcccccccccceEEeeCcccCCc----CchhccCcccCCceeecCcccccccCc
Q 039290 466 LGRLQKLQGLYLQNNKLEGSI-----PEDLCHLYRLANLYLGDNKLSGR----LPACLGNLTSLRDLSLGSNALTSIIPS 536 (1049)
Q Consensus 466 ~~~l~~L~~L~L~~N~l~~~~-----~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~ 536 (1049)
+..+++|++|++++|++++.. +..+..+++|++|++++|.++.. ++..+..+++|++|++++|++++..+.
T Consensus 223 l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~ 302 (461)
T 1z7x_W 223 VASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGAR 302 (461)
T ss_dssp HHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHH
T ss_pred HHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHH
Confidence 445555555555555554321 11122355666666666666532 455555566666666666666554443
Q ss_pred ccccc-----cccccccccCCccCCC----CccCcCCCcceeEeecccccccccccccccC-----CCcccEEEeecccc
Q 039290 537 TLWNL-----KDILRFNLSSNSLNGS----LLPDIGNLKVVIEMDLSLNALSGVIPVTIGG-----LQGLQLLSLRYNRL 602 (1049)
Q Consensus 537 ~~~~l-----~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l 602 (1049)
.+... ++|++|++++|.+++. ++..+..+++|++||+++|++++..+..+.. .++|+.|+|++|++
T Consensus 303 ~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i 382 (461)
T 1z7x_W 303 LLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDV 382 (461)
T ss_dssp HHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCC
T ss_pred HHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCC
Confidence 33332 4667777777766654 3444556677777788888777655554443 56888888888888
Q ss_pred cC----CccccccCccCCcEEeccCccccCCcccccc-----cccccceeeccCCccccc
Q 039290 603 QG----PIPESFGGLKSLNFVDMSNNNLSGTIPKSME-----ALSYLKHLNLSFNQLEGE 653 (1049)
Q Consensus 603 ~~----~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-----~l~~L~~l~l~~N~l~~~ 653 (1049)
++ .+|..+..+++|++|||++|++++.-...+. ...+|+.|++.+|.+...
T Consensus 383 ~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~~~~l~~~l~~~~~~L~~L~~~~~~~~~~ 442 (461)
T 1z7x_W 383 SDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSEE 442 (461)
T ss_dssp CHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCCHH
T ss_pred ChhhHHHHHHHHHhCCCccEEECCCCCCCHHHHHHHHHHhccCCcchhheeecccccCHH
Confidence 86 6777788888888888888888754222221 123577777777766543
No 299
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.97 E-value=5.8e-33 Score=310.25 Aligned_cols=235 Identities=23% Similarity=0.341 Sum_probs=121.2
Q ss_pred cCCcEeccccCCccccCcccccccCCccEEEeCCCCccCCCcccccCCCcccEEcCCCccCccccCCCcccccccCCCCc
Q 039290 121 RGLKYFDFRFNNFHIEIPSWFVSLPRLQHLLLKHNSFVGKIPETIGYLSLLQELDLSDNQLSGTIPSSIFNISSCQNLPV 200 (1049)
Q Consensus 121 ~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~l~~l~~ 200 (1049)
.++++|+|++|++. .+|..++++++|++|+|++|.++ .+|..++.+++|++|+|++|+++ .+|..+.+ +++
T Consensus 81 ~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~------l~~ 151 (328)
T 4fcg_A 81 PGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIAS------LNR 151 (328)
T ss_dssp TTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGG------CTT
T ss_pred cceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhc------CcC
Confidence 34455555555554 44555555555555555555555 45555555555555555555555 44544432 233
Q ss_pred cceEEeeccccCCCCCCCcccccccceecccccccccccCCCCccccccceEEeccccccccCccccccccceEEEeecc
Q 039290 201 LEGLFISYNQLTGPIPTNLWKCRELHVVSLAFNKFQGGIPRDIGNLTSVRNLFLGNNSLIGEIPNEIGNLRNLEVLGVQS 280 (1049)
Q Consensus 201 L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~ 280 (1049)
|++|++++|++.+.+|..+... .++..|+++++|++|+|++|+++ .+|..++++++|++|+|++
T Consensus 152 L~~L~L~~n~~~~~~p~~~~~~---------------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~ 215 (328)
T 4fcg_A 152 LRELSIRACPELTELPEPLAST---------------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRN 215 (328)
T ss_dssp CCEEEEEEETTCCCCCSCSEEE---------------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEES
T ss_pred CCEEECCCCCCccccChhHhhc---------------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccC
Confidence 5555555555555555444320 11222334444444444444444 4444444444444444444
Q ss_pred ccCCCccccccccccccceEEeccCccCCCCCCcccCCCCCccEEEcCCCCCCCCCCccccCCCCCceeecccCccccCc
Q 039290 281 SNLAGLIPASIFNISTLKELAVTDNDLLGSLPSSIDLGLPNLERLFLGENNFSGTIPSSLTNISELSVLDFGFNSFSGLI 360 (1049)
Q Consensus 281 n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 360 (1049)
|++++ +|..+..+++|++|++++|++.+.+|..+. .+++|++|+|++|++.+.+|..+.++++|++|+|++|++.+.+
T Consensus 216 N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~-~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~i 293 (328)
T 4fcg_A 216 SPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFG-GRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRL 293 (328)
T ss_dssp SCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTT-CCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCC
T ss_pred CCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhc-CCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhc
Confidence 44443 233344445555555555555544444433 4555666666666666666666666666666666666666666
Q ss_pred ccccccccccceeecccccccC
Q 039290 361 PTTFGNLRSLKLLSLAGNVLTS 382 (1049)
Q Consensus 361 p~~~~~l~~L~~L~L~~N~l~~ 382 (1049)
|..++++++|+.+++..|.+..
T Consensus 294 P~~l~~L~~L~~l~l~~~~~~~ 315 (328)
T 4fcg_A 294 PSLIAQLPANCIILVPPHLQAQ 315 (328)
T ss_dssp CGGGGGSCTTCEEECCGGGSCC
T ss_pred cHHHhhccCceEEeCCHHHHHH
Confidence 6666666666666666665544
No 300
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=1.8e-34 Score=340.24 Aligned_cols=357 Identities=18% Similarity=0.212 Sum_probs=255.0
Q ss_pred ccceEEEeeccccCCCccccc-cccccccceEEeccCccCCC----CCCcccCCCCCccEEEcCCCCCCCCCCcccc-CC
Q 039290 270 LRNLEVLGVQSSNLAGLIPAS-IFNISTLKELAVTDNDLLGS----LPSSIDLGLPNLERLFLGENNFSGTIPSSLT-NI 343 (1049)
Q Consensus 270 l~~L~~L~L~~n~l~~~~p~~-~~~l~~L~~L~l~~N~l~~~----~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l 343 (1049)
+++|+.|+|++|+++...... +..+++|++|++++|.+... ++..+ ..+++|++|+|++|.+++..+..+. .+
T Consensus 2 ~~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l-~~~~~L~~L~Ls~n~l~~~~~~~l~~~l 80 (461)
T 1z7x_W 2 SLDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSAL-RVNPALAELNLRSNELGDVGVHCVLQGL 80 (461)
T ss_dssp CEEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHH-HTCTTCCEEECTTCCCHHHHHHHHHHTT
T ss_pred CccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHH-HhCCCcCEEeCCCCcCChHHHHHHHHHH
Confidence 357888888888887654433 66777888888888776531 22222 2456677777777776543332222 23
Q ss_pred C----CCceeecccCcccc----CcccccccccccceeecccccccCCCCCcccccc-cccCCCCcEEEccCCccccCCC
Q 039290 344 S----ELSVLDFGFNSFSG----LIPTTFGNLRSLKLLSLAGNVLTSPTPDLSFLSS-LTSCRNLEIIYLSENPINGILP 414 (1049)
Q Consensus 344 ~----~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~-l~~l~~L~~L~Ls~N~i~~~~p 414 (1049)
+ +|++|++++|+++. .++..+..+++|++|++++|.++...... .... ....+
T Consensus 81 ~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~-l~~~l~~~~~----------------- 142 (461)
T 1z7x_W 81 QTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQL-LCEGLLDPQC----------------- 142 (461)
T ss_dssp CSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHH-HHHHHTSTTC-----------------
T ss_pred hhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHH-HHHHHhcCCC-----------------
Confidence 3 46667777666663 33555666666666666666554311100 0000 11123
Q ss_pred CccccccccccEEEccCCccccC----CCCCCCCCCCccEEEccCCcccccCCccccC-----cCCCcceEeeccccCCC
Q 039290 415 SSIGNFSISMKSLSMESCNISGG----IPKELGNINNLTVIRLGNNELTGTIPVTLGR-----LQKLQGLYLQNNKLEGS 485 (1049)
Q Consensus 415 ~~~~~~~~~L~~L~L~~n~i~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~L~~N~l~~~ 485 (1049)
+|++|++++|++++. ++..+..+++|++|+|++|.+++..+..+.. .++|++|+|++|++++.
T Consensus 143 --------~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~ 214 (461)
T 1z7x_W 143 --------RLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSD 214 (461)
T ss_dssp --------CCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTT
T ss_pred --------cceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHH
Confidence 355555555555442 3445666789999999999998655555443 56999999999999864
Q ss_pred ----CCcccccccccceEEeeCcccCCcC-----chhccCcccCCceeecCcccccc----cCcccccccccccccccCC
Q 039290 486 ----IPEDLCHLYRLANLYLGDNKLSGRL-----PACLGNLTSLRDLSLGSNALTSI----IPSTLWNLKDILRFNLSSN 552 (1049)
Q Consensus 486 ----~~~~~~~l~~L~~L~L~~N~l~~~~-----p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N 552 (1049)
++..+..+++|++|++++|++++.. +..+..+++|++|++++|++++. ++..+..+++|++|++++|
T Consensus 215 ~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n 294 (461)
T 1z7x_W 215 NCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGN 294 (461)
T ss_dssp HHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTC
T ss_pred HHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCC
Confidence 5777888999999999999987543 33344689999999999999975 5777888999999999999
Q ss_pred ccCCCCccCcCC-----CcceeEeeccccccccc----ccccccCCCcccEEEeecccccCCccccccC-----ccCCcE
Q 039290 553 SLNGSLLPDIGN-----LKVVIEMDLSLNALSGV----IPVTIGGLQGLQLLSLRYNRLQGPIPESFGG-----LKSLNF 618 (1049)
Q Consensus 553 ~l~~~~~~~~~~-----l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-----l~~L~~ 618 (1049)
.+++..+..+.. .++|++|++++|.+++. ++..+..+++|+.|+|++|++++..+..+.. .++|++
T Consensus 295 ~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~ 374 (461)
T 1z7x_W 295 ELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRV 374 (461)
T ss_dssp CCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCE
T ss_pred CCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEE
Confidence 997654444433 36999999999999976 5677888899999999999999766655543 679999
Q ss_pred EeccCccccC----CcccccccccccceeeccCCccccc
Q 039290 619 VDMSNNNLSG----TIPKSMEALSYLKHLNLSFNQLEGE 653 (1049)
Q Consensus 619 L~Ls~N~l~~----~~p~~~~~l~~L~~l~l~~N~l~~~ 653 (1049)
|+|++|++++ .+|..+..+++|++|++++|++++.
T Consensus 375 L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~ 413 (461)
T 1z7x_W 375 LWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDA 413 (461)
T ss_dssp EECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHH
T ss_pred EECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHH
Confidence 9999999996 7888999999999999999999864
No 301
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=1.2e-30 Score=295.50 Aligned_cols=288 Identities=20% Similarity=0.190 Sum_probs=198.0
Q ss_pred cCCCCCCCceeeeEEEcCCCCcEEEEEEeccccccccCCCCCCcchhhhhhcccCccccccCcccccccCCcEeccccCC
Q 039290 53 NWSTTSSVCSWIGVTCGVRNRRVTALNISYLGLTGTIPPQLGNLSFLAVLAIRNNSFFGSLPEELSHLRGLKYFDFRFNN 132 (1049)
Q Consensus 53 ~w~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~l~~n~~~g~~p~~~~~L~~L~~L~l~~n~ 132 (1049)
.|.....+|.|.|+ |+. ++++++ .+|..+. +.|++|++++|++++..+..++++++|++|++++|+
T Consensus 22 ~~~~~~~~C~~~~~-c~~----------~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 87 (353)
T 2z80_A 22 SSNQASLSCDRNGI-CKG----------SSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNG 87 (353)
T ss_dssp -----CCEECTTSE-EEC----------CSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSC
T ss_pred CCCccCCCCCCCeE-eeC----------CCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCc
Confidence 45555678999998 754 455666 7887665 488999999999886555588899999999999999
Q ss_pred ccccCcccccccCCccEEEeCCCCccCCCcccccCCCcccEEcCCCccCccccCC-CcccccccCCCCccceEEeeccc-
Q 039290 133 FHIEIPSWFVSLPRLQHLLLKHNSFVGKIPETIGYLSLLQELDLSDNQLSGTIPS-SIFNISSCQNLPVLEGLFISYNQ- 210 (1049)
Q Consensus 133 ~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~-~~~~l~~l~~l~~L~~L~l~~N~- 210 (1049)
+++..|..|+++++|++|+|++|++++..+..++.+++|++|+|++|+++ .+|. .. +..+++|++|++++|+
T Consensus 88 l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~-----~~~l~~L~~L~l~~n~~ 161 (353)
T 2z80_A 88 INTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSL-----FSHLTKLQILRVGNMDT 161 (353)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCS-----CTTCTTCCEEEEEESSS
T ss_pred cCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhh-----hccCCCCcEEECCCCcc
Confidence 98888888999999999999999998655555888999999999999988 5665 22 2345678888888884
Q ss_pred cCCCCCCCcccccccceecccccccccccCCCCccccccceEEeccccccccCccccccccceEEEeeccccCCCccccc
Q 039290 211 LTGPIPTNLWKCRELHVVSLAFNKFQGGIPRDIGNLTSVRNLFLGNNSLIGEIPNEIGNLRNLEVLGVQSSNLAGLIPAS 290 (1049)
Q Consensus 211 l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~ 290 (1049)
+++..|..+..+++|+.|++++|++++..|..++++++|++|++++|+++...+..++.+++|+.|++++|++++..+..
T Consensus 162 ~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~ 241 (353)
T 2z80_A 162 FTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSE 241 (353)
T ss_dssp CCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC-
T ss_pred ccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccc
Confidence 66555666777777777777777777777777777777777777777776333333445777777777777776654433
Q ss_pred cccccccceEEeccCccCCCCCCcccCCCCCccEEEcCCCCCCC----CCCccccCCCCCceeecccCccccCccccccc
Q 039290 291 IFNISTLKELAVTDNDLLGSLPSSIDLGLPNLERLFLGENNFSG----TIPSSLTNISELSVLDFGFNSFSGLIPTTFGN 366 (1049)
Q Consensus 291 ~~~l~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 366 (1049)
+... ...+.++.++|+++.+++ .+|..+..+++|++|++++|+++...+..|..
T Consensus 242 l~~~----------------------~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~ 299 (353)
T 2z80_A 242 LSTG----------------------ETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDR 299 (353)
T ss_dssp ---------------------------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred cccc----------------------cccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhc
Confidence 3210 112345555555555553 24556666667777777777776443333566
Q ss_pred ccccceeecccccccC
Q 039290 367 LRSLKLLSLAGNVLTS 382 (1049)
Q Consensus 367 l~~L~~L~L~~N~l~~ 382 (1049)
+++|++|++++|.++.
T Consensus 300 l~~L~~L~L~~N~~~~ 315 (353)
T 2z80_A 300 LTSLQKIWLHTNPWDC 315 (353)
T ss_dssp CTTCCEEECCSSCBCC
T ss_pred CCCCCEEEeeCCCccC
Confidence 7777777777776654
No 302
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=6.1e-30 Score=289.84 Aligned_cols=281 Identities=19% Similarity=0.219 Sum_probs=193.6
Q ss_pred CCCCCceeecccCccccCcccccccccccceeecccccccCCCCCcccccccccCCCCcEEEccCCccccCCCCcccccc
Q 039290 342 NISELSVLDFGFNSFSGLIPTTFGNLRSLKLLSLAGNVLTSPTPDLSFLSSLTSCRNLEIIYLSENPINGILPSSIGNFS 421 (1049)
Q Consensus 342 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~~~ 421 (1049)
.++.....++++|.++. +|..+. ++|++|++++|.++.++++ .+..+++
T Consensus 29 ~C~~~~~c~~~~~~l~~-iP~~~~--~~L~~L~l~~n~i~~~~~~-----~~~~l~~----------------------- 77 (353)
T 2z80_A 29 SCDRNGICKGSSGSLNS-IPSGLT--EAVKSLDLSNNRITYISNS-----DLQRCVN----------------------- 77 (353)
T ss_dssp EECTTSEEECCSTTCSS-CCTTCC--TTCCEEECTTSCCCEECTT-----TTTTCTT-----------------------
T ss_pred CCCCCeEeeCCCCCccc-cccccc--ccCcEEECCCCcCcccCHH-----HhccCCC-----------------------
Confidence 34445556666666663 344333 3555556655555544332 1344444
Q ss_pred ccccEEEccCCccccCCCCCCCCCCCccEEEccCCcccccCCccccCcCCCcceEeeccccCCCCC-cccccccccceEE
Q 039290 422 ISMKSLSMESCNISGGIPKELGNINNLTVIRLGNNELTGTIPVTLGRLQKLQGLYLQNNKLEGSIP-EDLCHLYRLANLY 500 (1049)
Q Consensus 422 ~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~ 500 (1049)
|++|++++|++++..|..|.++++|++|+|++|++++..+..|+.+++|++|+|++|++++..+ ..+..+++|++|+
T Consensus 78 --L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~ 155 (353)
T 2z80_A 78 --LQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILR 155 (353)
T ss_dssp --CCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEE
T ss_pred --CCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEE
Confidence 5555555555555555667777777777777777775444457777777777777777774333 3677777777777
Q ss_pred eeCc-ccCCcCchhccCcccCCceeecCcccccccCcccccccccccccccCCccCCCCccCcCCCcceeEeeccccccc
Q 039290 501 LGDN-KLSGRLPACLGNLTSLRDLSLGSNALTSIIPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALS 579 (1049)
Q Consensus 501 L~~N-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 579 (1049)
+++| .+.+..+..++++++|++|++++|++++..|..+..+++|++|++++|.++......+..+++|++|++++|+++
T Consensus 156 l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~ 235 (353)
T 2z80_A 156 VGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLD 235 (353)
T ss_dssp EEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCT
T ss_pred CCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccc
Confidence 7777 455555667777777777777777777777777777777777777777776543334455777888888888887
Q ss_pred cccccccc---CCCcccEEEeecccccC----CccccccCccCCcEEeccCccccCCcccc-cccccccceeeccCCccc
Q 039290 580 GVIPVTIG---GLQGLQLLSLRYNRLQG----PIPESFGGLKSLNFVDMSNNNLSGTIPKS-MEALSYLKHLNLSFNQLE 651 (1049)
Q Consensus 580 ~~~p~~~~---~l~~L~~L~Ls~N~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~l~l~~N~l~ 651 (1049)
+..+..+. ....++.++|++|.+++ .+|..+.++++|++|||++|+++ .+|.. +..+++|++|++++|++.
T Consensus 236 ~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~ 314 (353)
T 2z80_A 236 TFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWD 314 (353)
T ss_dssp TCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBC
T ss_pred cccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCcc
Confidence 66554433 35678888999988876 47888999999999999999999 56655 589999999999999999
Q ss_pred ccCCC
Q 039290 652 GEIPT 656 (1049)
Q Consensus 652 ~~~p~ 656 (1049)
|.+|.
T Consensus 315 ~~~~~ 319 (353)
T 2z80_A 315 CSCPR 319 (353)
T ss_dssp CCHHH
T ss_pred CcCCC
Confidence 98873
No 303
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=1.1e-29 Score=281.78 Aligned_cols=252 Identities=23% Similarity=0.252 Sum_probs=157.4
Q ss_pred CceeeeEEEcCCCCcEEEEEEeccccccccCCCCCCcchhhhhhcccCccccccCcc-cccccCCcEeccccCCcc--cc
Q 039290 60 VCSWIGVTCGVRNRRVTALNISYLGLTGTIPPQLGNLSFLAVLAIRNNSFFGSLPEE-LSHLRGLKYFDFRFNNFH--IE 136 (1049)
Q Consensus 60 ~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~l~~n~~~g~~p~~-~~~L~~L~~L~l~~n~~~--~~ 136 (1049)
.|.|.+|.|+.. +++ .+|..+. +.|++|+|++|+++ .+|.. ++++++|++|+|++|++. +.
T Consensus 6 ~C~~~~l~c~~~------------~l~-~ip~~~~--~~l~~L~L~~n~l~-~i~~~~~~~l~~L~~L~L~~n~l~~~~~ 69 (306)
T 2z66_A 6 SCSGTEIRCNSK------------GLT-SVPTGIP--SSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGC 69 (306)
T ss_dssp EEETTEEECCSS------------CCS-SCCSCCC--TTCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCEEEE
T ss_pred eeCCCEEEcCCC------------Ccc-cCCCCCC--CCCCEEECCCCccC-ccCHhHhhccccCCEEECCCCccCcccC
Confidence 389999999643 333 5666543 46778888888877 55554 577788888888888776 33
Q ss_pred CcccccccCCccEEEeCCCCccCCCcccccCCCcccEEcCCCccCccccCCCcccccccCCCCccceEEeeccccCCCCC
Q 039290 137 IPSWFVSLPRLQHLLLKHNSFVGKIPETIGYLSLLQELDLSDNQLSGTIPSSIFNISSCQNLPVLEGLFISYNQLTGPIP 216 (1049)
Q Consensus 137 ~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~l~~l~~L~~L~l~~N~l~~~~p 216 (1049)
+|..+..+++|++|+|++|.++ .+|..+..+++|++|++++|++++ +|. ...+..+++|++|++++|++++..|
T Consensus 70 ~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~-~~~----~~~~~~l~~L~~L~l~~n~l~~~~~ 143 (306)
T 2z66_A 70 CSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQ-MSE----FSVFLSLRNLIYLDISHTHTRVAFN 143 (306)
T ss_dssp EEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEES-STT----TTTTTTCTTCCEEECTTSCCEECST
T ss_pred cccccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccc-ccc----chhhhhccCCCEEECCCCcCCccch
Confidence 4666667777888888888777 567777777777888877777773 332 0112334556677777776666666
Q ss_pred CCcccccccceeccccccccc-ccCCCCccccccceEEeccccccccCccccccccceEEEeeccccCCCcccccccccc
Q 039290 217 TNLWKCRELHVVSLAFNKFQG-GIPRDIGNLTSVRNLFLGNNSLIGEIPNEIGNLRNLEVLGVQSSNLAGLIPASIFNIS 295 (1049)
Q Consensus 217 ~~l~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~ 295 (1049)
..+..+++|++|++++|++++ .+|..++.+++|++|+|++|++++..|..|+.+++|+.|+|++|++++..+..+..+
T Consensus 144 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l- 222 (306)
T 2z66_A 144 GIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCL- 222 (306)
T ss_dssp TTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTC-
T ss_pred hhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCc-
Confidence 666666666666666666655 455566666666666666666665555556666666666665555555444444444
Q ss_pred ccceEEeccCccCCCCCCcccCCCCCccEEEcCCCCCCCCCCccccCC-CCCceeecccCcccc
Q 039290 296 TLKELAVTDNDLLGSLPSSIDLGLPNLERLFLGENNFSGTIPSSLTNI-SELSVLDFGFNSFSG 358 (1049)
Q Consensus 296 ~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~ 358 (1049)
++|++|+|++|++++..|..+..+ ++|++|++++|.+.+
T Consensus 223 ------------------------~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 223 ------------------------NSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 262 (306)
T ss_dssp ------------------------TTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEEC
T ss_pred ------------------------ccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeec
Confidence 455555555555555555555554 255555555555543
No 304
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=1.7e-30 Score=288.69 Aligned_cols=253 Identities=20% Similarity=0.235 Sum_probs=152.2
Q ss_pred CcchhhhhhcccCccccccCcccccccCCcEeccccCCc-cccCccccc-------ccCCccEEEeCCCCccCCCcccc-
Q 039290 95 NLSFLAVLAIRNNSFFGSLPEELSHLRGLKYFDFRFNNF-HIEIPSWFV-------SLPRLQHLLLKHNSFVGKIPETI- 165 (1049)
Q Consensus 95 ~l~~L~~L~l~~n~~~g~~p~~~~~L~~L~~L~l~~n~~-~~~~p~~~~-------~l~~L~~L~L~~n~l~~~~p~~~- 165 (1049)
....|+.|++++|.+ .+|..+... |++|+|++|++ .+.+|..+. ++++|++|+|++|.+++.+|..+
T Consensus 41 ~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 116 (312)
T 1wwl_A 41 GGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLL 116 (312)
T ss_dssp EEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSS
T ss_pred cCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHH
Confidence 345566677777776 666666554 66667777666 445665554 56666666666666666666655
Q ss_pred -cCCCcccEEcCCCccCccccCCCcccccccCCCCccceEEeeccccCCCCCCCcccccccceecccccccccccCCCCc
Q 039290 166 -GYLSLLQELDLSDNQLSGTIPSSIFNISSCQNLPVLEGLFISYNQLTGPIPTNLWKCRELHVVSLAFNKFQGGIPRDIG 244 (1049)
Q Consensus 166 -~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~ 244 (1049)
+.+++|++|+|++|++++. |..+.++... .+++|++|+|++|++++.. |..|+
T Consensus 117 ~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~-~~~~L~~L~L~~N~l~~~~------------------------~~~~~ 170 (312)
T 1wwl_A 117 EATGPDLNILNLRNVSWATR-DAWLAELQQW-LKPGLKVLSIAQAHSLNFS------------------------CEQVR 170 (312)
T ss_dssp SCCSCCCSEEEEESCBCSSS-SSHHHHHHTT-CCTTCCEEEEESCSCCCCC------------------------TTTCC
T ss_pred HhcCCCccEEEccCCCCcch-hHHHHHHHHh-hcCCCcEEEeeCCCCccch------------------------HHHhc
Confidence 6666666666666666643 5444433110 1134555555555555444 44445
Q ss_pred cccccceEEecccccccc--Ccccc--ccccceEEEeeccccCCCc--cc-cccccccccceEEeccCccCCCCCCcccC
Q 039290 245 NLTSVRNLFLGNNSLIGE--IPNEI--GNLRNLEVLGVQSSNLAGL--IP-ASIFNISTLKELAVTDNDLLGSLPSSIDL 317 (1049)
Q Consensus 245 ~l~~L~~L~L~~N~l~~~--~p~~l--~~l~~L~~L~L~~n~l~~~--~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 317 (1049)
++++|++|+|++|++.+. +|..+ +.+++|++|+|++|++++. ++ ..+.++++|++|++++|++.+..|...+.
T Consensus 171 ~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 250 (312)
T 1wwl_A 171 VFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCD 250 (312)
T ss_dssp CCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCC
T ss_pred cCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhh
Confidence 555555555555554433 22232 5555555555555555521 12 22345566666677777666655544444
Q ss_pred CCCCccEEEcCCCCCCCCCCccccCCCCCceeecccCccccCcccccccccccceeecccccccC
Q 039290 318 GLPNLERLFLGENNFSGTIPSSLTNISELSVLDFGFNSFSGLIPTTFGNLRSLKLLSLAGNVLTS 382 (1049)
Q Consensus 318 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 382 (1049)
.+++|++|+|++|+++ .+|..+. ++|++|++++|++++. |. +..+++|++|++++|++++
T Consensus 251 ~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 251 WPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred hcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 5677777777777777 6666665 6788888888888765 55 7778888888888887765
No 305
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=3.2e-30 Score=286.44 Aligned_cols=253 Identities=20% Similarity=0.243 Sum_probs=192.2
Q ss_pred cccccCCcEeccccCCccccCcccccccCCccEEEeCCCCc-cCCCccccc-------CCCcccEEcCCCccCccccCCC
Q 039290 117 LSHLRGLKYFDFRFNNFHIEIPSWFVSLPRLQHLLLKHNSF-VGKIPETIG-------YLSLLQELDLSDNQLSGTIPSS 188 (1049)
Q Consensus 117 ~~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~n~l-~~~~p~~~~-------~l~~L~~L~Ls~N~l~g~ip~~ 188 (1049)
++..++|++|++++|++ .+|..+... |++|+|++|.+ .+.+|..+. .+++|++|+|++|+++|.+|..
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHH
Confidence 45566677777777777 666655544 66677777766 345565554 5666666666666666666655
Q ss_pred cccccccCCCCccceEEeeccccCCCCCCCcccccccceecccccccccccCCCCccc-----cccceEEeccccccccC
Q 039290 189 IFNISSCQNLPVLEGLFISYNQLTGPIPTNLWKCRELHVVSLAFNKFQGGIPRDIGNL-----TSVRNLFLGNNSLIGEI 263 (1049)
Q Consensus 189 ~~~l~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~ 263 (1049)
++ +..+++|++|+|++|++++ . |..++.+ ++|++|+|++|++++..
T Consensus 115 ~~----~~~l~~L~~L~Ls~N~l~~------------------------~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~ 165 (312)
T 1wwl_A 115 LL----EATGPDLNILNLRNVSWAT------------------------R-DAWLAELQQWLKPGLKVLSIAQAHSLNFS 165 (312)
T ss_dssp SS----SCCSCCCSEEEEESCBCSS------------------------S-SSHHHHHHTTCCTTCCEEEEESCSCCCCC
T ss_pred HH----HhcCCCccEEEccCCCCcc------------------------h-hHHHHHHHHhhcCCCcEEEeeCCCCccch
Confidence 42 1223445555555555553 3 5555555 89999999999999888
Q ss_pred ccccccccceEEEeeccccCCCc--ccccc--ccccccceEEeccCccCC--CCCCcccCCCCCccEEEcCCCCCCCCCC
Q 039290 264 PNEIGNLRNLEVLGVQSSNLAGL--IPASI--FNISTLKELAVTDNDLLG--SLPSSIDLGLPNLERLFLGENNFSGTIP 337 (1049)
Q Consensus 264 p~~l~~l~~L~~L~L~~n~l~~~--~p~~~--~~l~~L~~L~l~~N~l~~--~~p~~~~~~l~~L~~L~L~~N~l~~~~p 337 (1049)
|..|+++++|++|+|++|++.+. +|..+ ..+++|++|++++|++.+ .++..++..+++|++|+|++|++++..|
T Consensus 166 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 245 (312)
T 1wwl_A 166 CEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAG 245 (312)
T ss_dssp TTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCC
T ss_pred HHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccc
Confidence 89999999999999999998876 34444 889999999999999983 3444555578999999999999998775
Q ss_pred -ccccCCCCCceeecccCccccCcccccccccccceeecccccccCCCCCcccccccccCCCCcEEEccCCccccC
Q 039290 338 -SSLTNISELSVLDFGFNSFSGLIPTTFGNLRSLKLLSLAGNVLTSPTPDLSFLSSLTSCRNLEIIYLSENPINGI 412 (1049)
Q Consensus 338 -~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~i~~~ 412 (1049)
..+..+++|++|+|++|+++ .+|..+. ++|++|++++|+|++++. +..+++|++|++++|++++.
T Consensus 246 ~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~p~-------~~~l~~L~~L~L~~N~l~~~ 311 (312)
T 1wwl_A 246 APSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRNPS-------PDELPQVGNLSLKGNPFLDS 311 (312)
T ss_dssp CSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSCCC-------TTTSCEEEEEECTTCTTTCC
T ss_pred hhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCChh-------HhhCCCCCEEeccCCCCCCC
Confidence 56777899999999999999 5677776 899999999999998732 56789999999999999863
No 306
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=1.1e-28 Score=289.33 Aligned_cols=251 Identities=22% Similarity=0.287 Sum_probs=211.3
Q ss_pred cEEEccCCccccCCCCccccccccccEEEccCCccccCCCCCCCCCCCccEEEccCCcccccCCccccCcCCCcceEeec
Q 039290 400 EIIYLSENPINGILPSSIGNFSISMKSLSMESCNISGGIPKELGNINNLTVIRLGNNELTGTIPVTLGRLQKLQGLYLQN 479 (1049)
Q Consensus 400 ~~L~Ls~N~i~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 479 (1049)
..++.+++.++. +|..+ +.+++.|+|++|+|++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 57 ~~v~c~~~~l~~-iP~~~---~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~ 132 (452)
T 3zyi_A 57 SKVVCTRRGLSE-VPQGI---PSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFD 132 (452)
T ss_dssp CEEECCSSCCSS-CCSCC---CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred cEEEECCCCcCc-cCCCC---CCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCC
Confidence 344444444442 23222 23677777777777777788888888999999999999888888888899999999999
Q ss_pred cccCCCCCcccccccccceEEeeCcccCCcCchhccCcccCCceeecC-cccccccCcccccccccccccccCCccCCCC
Q 039290 480 NKLEGSIPEDLCHLYRLANLYLGDNKLSGRLPACLGNLTSLRDLSLGS-NALTSIIPSTLWNLKDILRFNLSSNSLNGSL 558 (1049)
Q Consensus 480 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 558 (1049)
|+|++..+..|..+++|++|+|++|++++..+..|.++++|++|++++ |.+..+.+..|..+++|++|+|++|++++.
T Consensus 133 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~- 211 (452)
T 3zyi_A 133 NWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM- 211 (452)
T ss_dssp SCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-
T ss_pred CcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-
Confidence 998877677788889999999999998876677888999999999998 566666666788999999999999999864
Q ss_pred ccCcCCCcceeEeecccccccccccccccCCCcccEEEeecccccCCccccccCccCCcEEeccCccccCCccccccccc
Q 039290 559 LPDIGNLKVVIEMDLSLNALSGVIPVTIGGLQGLQLLSLRYNRLQGPIPESFGGLKSLNFVDMSNNNLSGTIPKSMEALS 638 (1049)
Q Consensus 559 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 638 (1049)
+.+..+++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..|..|.++++|++|||++|+|++..+..+..++
T Consensus 212 -~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 290 (452)
T 3zyi_A 212 -PNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLR 290 (452)
T ss_dssp -CCCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCT
T ss_pred -ccccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhcccc
Confidence 4688899999999999999999999999999999999999999998899999999999999999999977778889999
Q ss_pred ccceeeccCCcccccCCC
Q 039290 639 YLKHLNLSFNQLEGEIPT 656 (1049)
Q Consensus 639 ~L~~l~l~~N~l~~~~p~ 656 (1049)
+|+.|+|++|+|.|++..
T Consensus 291 ~L~~L~L~~Np~~CdC~~ 308 (452)
T 3zyi_A 291 YLVELHLHHNPWNCDCDI 308 (452)
T ss_dssp TCCEEECCSSCEECSTTT
T ss_pred CCCEEEccCCCcCCCCCc
Confidence 999999999999998864
No 307
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=4.4e-29 Score=276.89 Aligned_cols=233 Identities=20% Similarity=0.204 Sum_probs=192.8
Q ss_pred cccEEEccCCccccCCCCCCCCCCCccEEEccCCccccc--CCccccCcCCCcceEeeccccCCCCCcccccccccceEE
Q 039290 423 SMKSLSMESCNISGGIPKELGNINNLTVIRLGNNELTGT--IPVTLGRLQKLQGLYLQNNKLEGSIPEDLCHLYRLANLY 500 (1049)
Q Consensus 423 ~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 500 (1049)
++++|+|++|+++...+..|.++++|++|+|++|.++.. .|..+..+++|++|+|++|.++ .+|..+..+++|++|+
T Consensus 29 ~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~ 107 (306)
T 2z66_A 29 SATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLD 107 (306)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEE
T ss_pred CCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEEE
Confidence 566667777776654455577888888888888888733 3566777888888888888887 5677788888888888
Q ss_pred eeCcccCCcCc-hhccCcccCCceeecCcccccccCcccccccccccccccCCccCC-CCccCcCCCcceeEeecccccc
Q 039290 501 LGDNKLSGRLP-ACLGNLTSLRDLSLGSNALTSIIPSTLWNLKDILRFNLSSNSLNG-SLLPDIGNLKVVIEMDLSLNAL 578 (1049)
Q Consensus 501 L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l 578 (1049)
+++|++++..+ ..+..+++|++|++++|++++..|..+..+++|++|++++|.+++ ..|..+..+++|++|++++|++
T Consensus 108 l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l 187 (306)
T 2z66_A 108 FQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQL 187 (306)
T ss_dssp CTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCC
T ss_pred CCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCc
Confidence 88888886544 578888888899999888888888888888889999999988876 5677888889999999999999
Q ss_pred cccccccccCCCcccEEEeecccccCCccccccCccCCcEEeccCccccCCccccccccc-ccceeeccCCcccccCCC
Q 039290 579 SGVIPVTIGGLQGLQLLSLRYNRLQGPIPESFGGLKSLNFVDMSNNNLSGTIPKSMEALS-YLKHLNLSFNQLEGEIPT 656 (1049)
Q Consensus 579 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~l~l~~N~l~~~~p~ 656 (1049)
++..|..|..+++|+.|+|++|++++..+..|..+++|++|||++|++++..|..+..++ +|++|++++|+|+|.++.
T Consensus 188 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~ 266 (306)
T 2z66_A 188 EQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEH 266 (306)
T ss_dssp CEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGG
T ss_pred CCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccCh
Confidence 888888899999999999999999987777888899999999999999988888888884 899999999999887753
No 308
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=3.3e-31 Score=322.87 Aligned_cols=379 Identities=16% Similarity=0.091 Sum_probs=228.1
Q ss_pred cccccceEEeccccccccCccccccc--cceEEEeeccccC-CC-ccccccccccccceEEeccCccCCCCCCc---ccC
Q 039290 245 NLTSVRNLFLGNNSLIGEIPNEIGNL--RNLEVLGVQSSNL-AG-LIPASIFNISTLKELAVTDNDLLGSLPSS---IDL 317 (1049)
Q Consensus 245 ~l~~L~~L~L~~N~l~~~~p~~l~~l--~~L~~L~L~~n~l-~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p~~---~~~ 317 (1049)
++++|++|+|++|.+++..+..++.. .+|++|+|++|.. .. .++....++++|++|+|++|.+.+.-..+ +..
T Consensus 110 ~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~ 189 (592)
T 3ogk_B 110 NLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQ 189 (592)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHH
T ss_pred hCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHh
Confidence 66778888888887777666666664 4488888877752 11 12233346788888888888776442211 223
Q ss_pred CCCCccEEEcCCCCCCC----CCCccccCCCCCceeecccCccccCcccccccccccceeecccccccCCCCCccccccc
Q 039290 318 GLPNLERLFLGENNFSG----TIPSSLTNISELSVLDFGFNSFSGLIPTTFGNLRSLKLLSLAGNVLTSPTPDLSFLSSL 393 (1049)
Q Consensus 318 ~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~l 393 (1049)
.+++|++|++++|.+++ .++..+.++++|++|++++|.+.+ +|..+.++++|++|+++++...... ......+
T Consensus 190 ~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~--~~~~~~l 266 (592)
T 3ogk_B 190 HNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGM--PEKYMNL 266 (592)
T ss_dssp HCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTC--TTSSSCC
T ss_pred cCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccch--HHHHHHh
Confidence 57888888888888873 344455678889999999988886 5678888889999988864322111 1123456
Q ss_pred ccCCCCcEEEccCCccccCCCCccccccccccEEEccCCccccCCC-CCCCCCCCccEEEccCCccc-ccCCccccCcCC
Q 039290 394 TSCRNLEIIYLSENPINGILPSSIGNFSISMKSLSMESCNISGGIP-KELGNINNLTVIRLGNNELT-GTIPVTLGRLQK 471 (1049)
Q Consensus 394 ~~l~~L~~L~Ls~N~i~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p-~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~ 471 (1049)
..+++|+.|+++++... .+|..+... .+|++|+|++|.+++... ..+..+++|++|+++ +.+. +.++..+..+++
T Consensus 267 ~~~~~L~~L~l~~~~~~-~l~~~~~~~-~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~ 343 (592)
T 3ogk_B 267 VFPRKLCRLGLSYMGPN-EMPILFPFA-AQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQ 343 (592)
T ss_dssp CCCTTCCEEEETTCCTT-TGGGGGGGG-GGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTT
T ss_pred hccccccccCccccchh-HHHHHHhhc-CCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCC
Confidence 67778888888775322 333333333 367777777776554333 234566777777777 3333 223333455667
Q ss_pred CcceEeec-----------cccCCCC-CcccccccccceEEeeCcccCCcCchhccC-cccCCceeec----Ccccccc-
Q 039290 472 LQGLYLQN-----------NKLEGSI-PEDLCHLYRLANLYLGDNKLSGRLPACLGN-LTSLRDLSLG----SNALTSI- 533 (1049)
Q Consensus 472 L~~L~L~~-----------N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~L~L~----~N~l~~~- 533 (1049)
|++|++++ |.+++.. +..+..+++|++|+++.|.+++..+..++. +++|+.|+++ .|++++.
T Consensus 344 L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p 423 (592)
T 3ogk_B 344 LKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLP 423 (592)
T ss_dssp CCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCC
T ss_pred CCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCch
Confidence 77777772 4444321 112334667777777777776655555554 6667777774 5566542
Q ss_pred ----cCcccccccccccccccCCc--cCCCCccCcC-CCcceeEeecccccccc-cccccccCCCcccEEEeecccccCC
Q 039290 534 ----IPSTLWNLKDILRFNLSSNS--LNGSLLPDIG-NLKVVIEMDLSLNALSG-VIPVTIGGLQGLQLLSLRYNRLQGP 605 (1049)
Q Consensus 534 ----~p~~~~~l~~L~~L~Ls~N~--l~~~~~~~~~-~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~ 605 (1049)
++..+..+++|++|+++.|. +++..+..+. .+++|++|++++|++++ .++..+.++++|+.|+|++|++++.
T Consensus 424 ~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~ 503 (592)
T 3ogk_B 424 LDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSER 503 (592)
T ss_dssp CHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHH
T ss_pred HHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHH
Confidence 23335556666666665432 4433333332 25566666666666654 2334445666666666666666543
Q ss_pred -ccccccCccCCcEEeccCccccCC
Q 039290 606 -IPESFGGLKSLNFVDMSNNNLSGT 629 (1049)
Q Consensus 606 -~~~~~~~l~~L~~L~Ls~N~l~~~ 629 (1049)
++..+..+++|++|+|++|++++.
T Consensus 504 ~~~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 504 AIAAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp HHHHHHHHCSSCCEEEEESCBCCTT
T ss_pred HHHHHHHhcCccCeeECcCCcCCHH
Confidence 333344566666666666666644
No 309
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=1.6e-28 Score=286.91 Aligned_cols=232 Identities=23% Similarity=0.282 Sum_probs=205.8
Q ss_pred cccEEEccCCccccCCCCCCCCCCCccEEEccCCcccccCCccccCcCCCcceEeeccccCCCCCcccccccccceEEee
Q 039290 423 SMKSLSMESCNISGGIPKELGNINNLTVIRLGNNELTGTIPVTLGRLQKLQGLYLQNNKLEGSIPEDLCHLYRLANLYLG 502 (1049)
Q Consensus 423 ~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 502 (1049)
+++.|+|++|+|++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|+
T Consensus 65 ~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 144 (440)
T 3zyj_A 65 NTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLR 144 (440)
T ss_dssp TCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECC
T ss_pred CCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCC
Confidence 66777777777777777888899999999999999998878889999999999999999987767788999999999999
Q ss_pred CcccCCcCchhccCcccCCceeecC-cccccccCcccccccccccccccCCccCCCCccCcCCCcceeEeeccccccccc
Q 039290 503 DNKLSGRLPACLGNLTSLRDLSLGS-NALTSIIPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALSGV 581 (1049)
Q Consensus 503 ~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 581 (1049)
+|+++...+..|.++++|++|++++ |.+..+.+..|.++++|++|++++|+++.. | .+..+++|++|+|++|+|++.
T Consensus 145 ~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~ 222 (440)
T 3zyj_A 145 NNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREI-P-NLTPLIKLDELDLSGNHLSAI 222 (440)
T ss_dssp SCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSC-C-CCTTCSSCCEEECTTSCCCEE
T ss_pred CCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCccc-c-ccCCCcccCEEECCCCccCcc
Confidence 9999877777899999999999998 556666666889999999999999999853 3 588899999999999999999
Q ss_pred ccccccCCCcccEEEeecccccCCccccccCccCCcEEeccCccccCCcccccccccccceeeccCCcccccCCC
Q 039290 582 IPVTIGGLQGLQLLSLRYNRLQGPIPESFGGLKSLNFVDMSNNNLSGTIPKSMEALSYLKHLNLSFNQLEGEIPT 656 (1049)
Q Consensus 582 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~ 656 (1049)
.|..|.++++|+.|+|++|+|++..+..|.++++|++|||++|+|++..+..+..+++|+.|+|++|+|.|++..
T Consensus 223 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~l 297 (440)
T 3zyj_A 223 RPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCDI 297 (440)
T ss_dssp CTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSSTT
T ss_pred ChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCCCc
Confidence 999999999999999999999999999999999999999999999987778889999999999999999998864
No 310
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=2.6e-31 Score=323.70 Aligned_cols=454 Identities=16% Similarity=0.096 Sum_probs=271.2
Q ss_pred CceeeeEEEcCCCCcEEEEEEeccccccccCCCCCCcchhhhhhcccCcc---ccccCcccc------------cccCCc
Q 039290 60 VCSWIGVTCGVRNRRVTALNISYLGLTGTIPPQLGNLSFLAVLAIRNNSF---FGSLPEELS------------HLRGLK 124 (1049)
Q Consensus 60 ~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~l~~n~~---~g~~p~~~~------------~L~~L~ 124 (1049)
|++|.+|.+.. ++ .+.+. +.+....+..+..++.|++|+|+++.. .|.+|..++ ++++|+
T Consensus 41 ck~W~~~~~~~--~~--~l~~~-~~~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~ 115 (592)
T 3ogk_B 41 CRRWFKIDSET--RE--HVTMA-LCYTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLK 115 (592)
T ss_dssp CHHHHHHHHHH--CC--EEEES-CGGGSCHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCC
T ss_pred hHHHHHhhhcc--cc--EEEEe-eccccChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCC
Confidence 44798885432 11 12222 122222233345566677777766421 134443333 677788
Q ss_pred EeccccCCccccCccccccc--CCccEEEeCCCC-cc-CCCcccccCCCcccEEcCCCccCccccCCCcccccccCCCCc
Q 039290 125 YFDFRFNNFHIEIPSWFVSL--PRLQHLLLKHNS-FV-GKIPETIGYLSLLQELDLSDNQLSGTIPSSIFNISSCQNLPV 200 (1049)
Q Consensus 125 ~L~l~~n~~~~~~p~~~~~l--~~L~~L~L~~n~-l~-~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~l~~l~~ 200 (1049)
+|+|++|.+++..+.++..+ ++|++|+|++|. ++ ..++..+..+++|++|+|++|.+++.-+..+..+ ...+++
T Consensus 116 ~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~--~~~~~~ 193 (592)
T 3ogk_B 116 SVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHEL--AQHNTS 193 (592)
T ss_dssp EEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHH--HHHCCC
T ss_pred eEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHH--HhcCCC
Confidence 88888777776666666663 348888887775 21 1123333467778888888877764311111111 123456
Q ss_pred cceEEeeccccCC----CCCCCcccccccceecccccccccccCCCCccccccceEEecccccc---ccCccccccccce
Q 039290 201 LEGLFISYNQLTG----PIPTNLWKCRELHVVSLAFNKFQGGIPRDIGNLTSVRNLFLGNNSLI---GEIPNEIGNLRNL 273 (1049)
Q Consensus 201 L~~L~l~~N~l~~----~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~---~~~p~~l~~l~~L 273 (1049)
|++|++++|.+++ .++..+..+++|+.|++++|.+.+ +|..++++++|++|+++.+... +..+..++.+++|
T Consensus 194 L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L 272 (592)
T 3ogk_B 194 LEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKL 272 (592)
T ss_dssp CCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTC
T ss_pred ccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccc
Confidence 7777888777762 334445567778888888777775 6666777777888877754322 2344566777777
Q ss_pred EEEeeccccCCCccccccccccccceEEeccCccCCCCCCcccCCCCCccEEEcCCCCCCCCCCccccCCCCCceeecc-
Q 039290 274 EVLGVQSSNLAGLIPASIFNISTLKELAVTDNDLLGSLPSSIDLGLPNLERLFLGENNFSGTIPSSLTNISELSVLDFG- 352 (1049)
Q Consensus 274 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls- 352 (1049)
+.|+++++ ..+.+|..+..+++|++|++++|.+.+.....+...+++|++|+++++...+.++..+..+++|++|+++
T Consensus 273 ~~L~l~~~-~~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~ 351 (592)
T 3ogk_B 273 CRLGLSYM-GPNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIER 351 (592)
T ss_dssp CEEEETTC-CTTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEEC
T ss_pred cccCcccc-chhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeec
Confidence 77777664 3345566677777788888877775543332333467777887777332222333444566777888877
Q ss_pred ----------cCccccC-cccccccccccceeecccccccCCCCCcccccccc-cCCCCcEEEcc----CCccccC----
Q 039290 353 ----------FNSFSGL-IPTTFGNLRSLKLLSLAGNVLTSPTPDLSFLSSLT-SCRNLEIIYLS----ENPINGI---- 412 (1049)
Q Consensus 353 ----------~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~l~-~l~~L~~L~Ls----~N~i~~~---- 412 (1049)
.|.+++. ++..+..+++|++|+++.|.++... +..+. .+++|+.|+++ .|.+++.
T Consensus 352 g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~-----~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~ 426 (592)
T 3ogk_B 352 GADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNES-----LESIGTYLKNLCDFRLVLLDREERITDLPLDN 426 (592)
T ss_dssp CCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHH-----HHHHHHHCCSCCEEEEEECSCCSCCSSCCCHH
T ss_pred CccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHH-----HHHHHhhCCCCcEEEEeecCCCccccCchHHH
Confidence 3555532 2222445677788877777665421 12233 36777777775 5566643
Q ss_pred -CCCccccccccccEEEccCCc--cccCCCCCCC-CCCCccEEEccCCccccc-CCccccCcCCCcceEeeccccCCC-C
Q 039290 413 -LPSSIGNFSISMKSLSMESCN--ISGGIPKELG-NINNLTVIRLGNNELTGT-IPVTLGRLQKLQGLYLQNNKLEGS-I 486 (1049)
Q Consensus 413 -~p~~~~~~~~~L~~L~L~~n~--i~~~~p~~~~-~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~-~ 486 (1049)
++..+..+ .+|+.|+++.|. +++..+..+. .+++|++|+|++|++++. ++..+..+++|++|+|++|.+++. +
T Consensus 427 ~~~~~~~~~-~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~ 505 (592)
T 3ogk_B 427 GVRSLLIGC-KKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAI 505 (592)
T ss_dssp HHHHHHHHC-TTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHH
T ss_pred HHHHHHHhC-CCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHH
Confidence 11112222 377888886543 5544444443 377888999998888753 445567788899999999987644 3
Q ss_pred CcccccccccceEEeeCcccCCcCchhc-cCcccCCceeecCc
Q 039290 487 PEDLCHLYRLANLYLGDNKLSGRLPACL-GNLTSLRDLSLGSN 528 (1049)
Q Consensus 487 ~~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~L~~N 528 (1049)
+..+..+++|++|++++|+++......+ ..++.+....+..+
T Consensus 506 ~~~~~~l~~L~~L~ls~n~it~~~~~~l~~~~p~l~~~~~~~~ 548 (592)
T 3ogk_B 506 AAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSR 548 (592)
T ss_dssp HHHHHHCSSCCEEEEESCBCCTTCTTGGGGCCTTEEEEEECCC
T ss_pred HHHHHhcCccCeeECcCCcCCHHHHHHHHHhCCCcEEEEecCc
Confidence 3344568889999999999876533333 24565555555444
No 311
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=6.1e-29 Score=272.58 Aligned_cols=252 Identities=21% Similarity=0.247 Sum_probs=164.2
Q ss_pred cEEEccCCccccCCCCccccccccccEEEccCCccccCCCCCCCCCCCccEEEccCCcccccCCccccCcCCCcceEeec
Q 039290 400 EIIYLSENPINGILPSSIGNFSISMKSLSMESCNISGGIPKELGNINNLTVIRLGNNELTGTIPVTLGRLQKLQGLYLQN 479 (1049)
Q Consensus 400 ~~L~Ls~N~i~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 479 (1049)
+.++.+++.++.+ |..+ ..++++|++++|.+++..+..|..+++|++|+|++|.+++..|..|..+++|++|+|++
T Consensus 14 ~~~~c~~~~l~~i-p~~~---~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 89 (285)
T 1ozn_A 14 VTTSCPQQGLQAV-PVGI---PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSD 89 (285)
T ss_dssp CEEECCSSCCSSC-CTTC---CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred eEEEcCcCCcccC-CcCC---CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCC
Confidence 5677777777743 3322 23677777777777766666777777777777777777766677777777777777777
Q ss_pred cc-cCCCCCcccccccccceEEeeCcccCCcCchhccCcccCCceeecCcccccccCcccccccccccccccCCccCCCC
Q 039290 480 NK-LEGSIPEDLCHLYRLANLYLGDNKLSGRLPACLGNLTSLRDLSLGSNALTSIIPSTLWNLKDILRFNLSSNSLNGSL 558 (1049)
Q Consensus 480 N~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 558 (1049)
|+ ++...|..+..+++|++|++++|.+++..|..+.++++|++|++++|++++..+..+..+++|++|++++|++++..
T Consensus 90 n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 169 (285)
T 1ozn_A 90 NAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVP 169 (285)
T ss_dssp CTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEEC
T ss_pred CCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccC
Confidence 76 66555666777777777777777777666666677777777777777777666666666666666666666666555
Q ss_pred ccCcCCCcceeEeecccccccccccccccCCCcccEEEeecccccCCccccccCccCCcEEeccCccccCCccccccccc
Q 039290 559 LPDIGNLKVVIEMDLSLNALSGVIPVTIGGLQGLQLLSLRYNRLQGPIPESFGGLKSLNFVDMSNNNLSGTIPKSMEALS 638 (1049)
Q Consensus 559 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 638 (1049)
+..+..+++|++|++++|++++..|..|..+++|+.|+|++|++++..+..|..+++|++|+|++|++++..+.. ..+.
T Consensus 170 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~-~~~~ 248 (285)
T 1ozn_A 170 ERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR-PLWA 248 (285)
T ss_dssp TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH-HHHH
T ss_pred HHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH-HHHH
Confidence 555666666666666666666666666666666666666666666655555666666666666666665433321 2223
Q ss_pred ccceeeccCCcccccCCC
Q 039290 639 YLKHLNLSFNQLEGEIPT 656 (1049)
Q Consensus 639 ~L~~l~l~~N~l~~~~p~ 656 (1049)
.++.+..+.|.+.|..|.
T Consensus 249 ~l~~~~~~~~~~~c~~p~ 266 (285)
T 1ozn_A 249 WLQKFRGSSSEVPCSLPQ 266 (285)
T ss_dssp HHHHCCSEECCCBEEESG
T ss_pred HHHhcccccCccccCCch
Confidence 344555556666666554
No 312
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=3.6e-28 Score=266.50 Aligned_cols=252 Identities=23% Similarity=0.230 Sum_probs=210.4
Q ss_pred ccEEEccCCccccCCCCCCCCCCCccEEEccCCcccccCCccccCcCCCcceEeeccccCCCCCcccccccccceEEeeC
Q 039290 424 MKSLSMESCNISGGIPKELGNINNLTVIRLGNNELTGTIPVTLGRLQKLQGLYLQNNKLEGSIPEDLCHLYRLANLYLGD 503 (1049)
Q Consensus 424 L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 503 (1049)
-+.+++++++++ .+|..+ .++|++|+|++|.+++..+..|..+++|++|+|++|++++..|..|..+++|++|++++
T Consensus 13 ~~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 89 (285)
T 1ozn_A 13 KVTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSD 89 (285)
T ss_dssp SCEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CeEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCC
Confidence 357888888887 455544 46899999999999987778899999999999999999887788899999999999999
Q ss_pred cc-cCCcCchhccCcccCCceeecCcccccccCcccccccccccccccCCccCCCCccCcCCCcceeEeecccccccccc
Q 039290 504 NK-LSGRLPACLGNLTSLRDLSLGSNALTSIIPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALSGVI 582 (1049)
Q Consensus 504 N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 582 (1049)
|+ +....|..+..+++|++|++++|++++..|..+..+++|++|++++|++++..+..+..+++|++|+|++|++++..
T Consensus 90 n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 169 (285)
T 1ozn_A 90 NAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVP 169 (285)
T ss_dssp CTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEEC
T ss_pred CCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccC
Confidence 97 77666888999999999999999999888888999999999999999998877777888999999999999998777
Q ss_pred cccccCCCcccEEEeecccccCCccccccCccCCcEEeccCccccCCcccccccccccceeeccCCcccccCCCCCCccc
Q 039290 583 PVTIGGLQGLQLLSLRYNRLQGPIPESFGGLKSLNFVDMSNNNLSGTIPKSMEALSYLKHLNLSFNQLEGEIPTRGPFIT 662 (1049)
Q Consensus 583 p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~ 662 (1049)
+..|..+++|+.|+|++|++++..|..|.++++|++|+|++|++++..+..+..+++|++|++++|+|.|.++....+..
T Consensus 170 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~~~~~~ 249 (285)
T 1ozn_A 170 ERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLWAW 249 (285)
T ss_dssp TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGHHHHHH
T ss_pred HHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcHHHHHH
Confidence 77789999999999999999988888999999999999999999977777788899999999999999988875433333
Q ss_pred cccccccCCccccCCC
Q 039290 663 FSAESFLGNQALCGSP 678 (1049)
Q Consensus 663 ~~~~~~~~n~~~cg~~ 678 (1049)
+.......+...|..|
T Consensus 250 l~~~~~~~~~~~c~~p 265 (285)
T 1ozn_A 250 LQKFRGSSSEVPCSLP 265 (285)
T ss_dssp HHHCCSEECCCBEEES
T ss_pred HHhcccccCccccCCc
Confidence 3333344555666655
No 313
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=2.3e-28 Score=293.43 Aligned_cols=286 Identities=29% Similarity=0.346 Sum_probs=173.0
Q ss_pred ccCCCCCCCceeeeEEEcC------CCCcEEEEEEeccccccccCCCCCCcchhhhhhcccCccccccCcccccccCCcE
Q 039290 52 NNWSTTSSVCSWIGVTCGV------RNRRVTALNISYLGLTGTIPPQLGNLSFLAVLAIRNNSFFGSLPEELSHLRGLKY 125 (1049)
Q Consensus 52 ~~w~~~~~~c~w~gv~c~~------~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~l~~n~~~g~~p~~~~~L~~L~~ 125 (1049)
+.|..+.+||.|+|..|.. ....++.|++++++++ .+|..+. ++|++|+|++|.++ .||. .+++|++
T Consensus 13 ~~W~~~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~ 85 (622)
T 3g06_A 13 SAWRRAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRT 85 (622)
T ss_dssp HHHHHTCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCE
T ss_pred HHHHhcCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCE
Confidence 4788888999998764421 1123667777777777 6776655 56666666666665 4555 4556666
Q ss_pred eccccCCccccCcccccccCCccEEEeCCCCccCCCcccccCCCcccEEcCCCccCccccCCCcccccccCCCCccceEE
Q 039290 126 FDFRFNNFHIEIPSWFVSLPRLQHLLLKHNSFVGKIPETIGYLSLLQELDLSDNQLSGTIPSSIFNISSCQNLPVLEGLF 205 (1049)
Q Consensus 126 L~l~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~l~~l~~L~~L~ 205 (1049)
|||++|+++ .+|. .+++|++|+|++|.+++ +|. .+++|+.|+|++|+++ .+|..+ ++|++|+
T Consensus 86 L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~-~lp~~l---------~~L~~L~ 147 (622)
T 3g06_A 86 LEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLT-SLPVLP---------PGLQELS 147 (622)
T ss_dssp EEECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCS-CCCCCC---------TTCCEEE
T ss_pred EEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCC-cCCCCC---------CCCCEEE
Confidence 666666665 3444 45666666666666653 443 4455666666666665 344321 3455555
Q ss_pred eeccccCCCCCCCcccccccceecccccccccccCCCCccccccceEEeccccccccCccccccccceEEEeeccccCCC
Q 039290 206 ISYNQLTGPIPTNLWKCRELHVVSLAFNKFQGGIPRDIGNLTSVRNLFLGNNSLIGEIPNEIGNLRNLEVLGVQSSNLAG 285 (1049)
Q Consensus 206 l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~ 285 (1049)
+++|++++ +|.. ..+|+.|++++|++++ +| ..+++|+.|++++|++++
T Consensus 148 Ls~N~l~~-l~~~---------------------------~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~ 195 (622)
T 3g06_A 148 VSDNQLAS-LPAL---------------------------PSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS 195 (622)
T ss_dssp CCSSCCSC-CCCC---------------------------CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC
T ss_pred CcCCcCCC-cCCc---------------------------cCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC
Confidence 55555553 2321 2344555555555552 33 334555555555555554
Q ss_pred ccccccccccccceEEeccCccCCCCCCcccCCCCCccEEEcCCCCCCCCCCccccCCCCCceeecccCccccCcccccc
Q 039290 286 LIPASIFNISTLKELAVTDNDLLGSLPSSIDLGLPNLERLFLGENNFSGTIPSSLTNISELSVLDFGFNSFSGLIPTTFG 365 (1049)
Q Consensus 286 ~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 365 (1049)
. |.. +++|+.|++++|.+. .+|. .+++|++|+|++|++++ +| ..+++|+.|++++|+|+. +|.
T Consensus 196 l-~~~---~~~L~~L~L~~N~l~-~l~~----~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~-lp~--- 258 (622)
T 3g06_A 196 L-PTL---PSELYKLWAYNNRLT-SLPA----LPSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS-LPM--- 258 (622)
T ss_dssp C-CCC---CTTCCEEECCSSCCS-SCCC----CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC---
T ss_pred C-CCc---cchhhEEECcCCccc-ccCC----CCCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc-CCc---
Confidence 2 221 355666666666665 4443 23677777777777774 45 345677788888887774 344
Q ss_pred cccccceeecccccccCCCCCcccccccccCCCCcEEEccCCccccCCCCcc
Q 039290 366 NLRSLKLLSLAGNVLTSPTPDLSFLSSLTSCRNLEIIYLSENPINGILPSSI 417 (1049)
Q Consensus 366 ~l~~L~~L~L~~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~i~~~~p~~~ 417 (1049)
.+++|+.|+|++|.|+.++. .+.++++|+.|+|++|++++..|..+
T Consensus 259 ~~~~L~~L~Ls~N~L~~lp~------~l~~l~~L~~L~L~~N~l~~~~~~~l 304 (622)
T 3g06_A 259 LPSGLLSLSVYRNQLTRLPE------SLIHLSSETTVNLEGNPLSERTLQAL 304 (622)
T ss_dssp CCTTCCEEECCSSCCCSCCG------GGGGSCTTCEEECCSCCCCHHHHHHH
T ss_pred ccccCcEEeCCCCCCCcCCH------HHhhccccCEEEecCCCCCCcCHHHH
Confidence 55777888888888776543 25677888888888888887655444
No 314
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=4.2e-27 Score=275.79 Aligned_cols=229 Identities=22% Similarity=0.231 Sum_probs=182.4
Q ss_pred CCcEEEccCCccccCCCCccccccccccEEEccCCccccCCCCCCCCCCCccEEEccCCcccccCCccccCcCCCcceEe
Q 039290 398 NLEIIYLSENPINGILPSSIGNFSISMKSLSMESCNISGGIPKELGNINNLTVIRLGNNELTGTIPVTLGRLQKLQGLYL 477 (1049)
Q Consensus 398 ~L~~L~Ls~N~i~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 477 (1049)
+++.|+|++|.|+++.+..+..+. +|++|+|++|+|++..|..|.++++|++|+|++|++++..+..|..+++|++|+|
T Consensus 76 ~l~~L~L~~n~i~~~~~~~~~~l~-~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 76 NTRYLNLMENNIQMIQADTFRHLH-HLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TCSEEECCSSCCCEECTTTTTTCT-TCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CccEEECcCCcCceECHHHcCCCC-CCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 455555555555555555555544 6666666666666666777788888888888888888766677888888888888
Q ss_pred eccccCCCCCcccccccccceEEeeC-cccCCcCchhccCcccCCceeecCcccccccCcccccccccccccccCCccCC
Q 039290 478 QNNKLEGSIPEDLCHLYRLANLYLGD-NKLSGRLPACLGNLTSLRDLSLGSNALTSIIPSTLWNLKDILRFNLSSNSLNG 556 (1049)
Q Consensus 478 ~~N~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 556 (1049)
++|+|++..+..|..+++|++|++++ |.+....+..|.++++|++|+|++|+++++ | .+..+++|+.|+|++|++++
T Consensus 155 ~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~ 232 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPE 232 (452)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSE
T ss_pred CCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCcc
Confidence 88888866666788888888888888 445433445688888888888888888874 3 47788889999999999988
Q ss_pred CCccCcCCCcceeEeecccccccccccccccCCCcccEEEeecccccCCccccccCccCCcEEeccCccccCC
Q 039290 557 SLLPDIGNLKVVIEMDLSLNALSGVIPVTIGGLQGLQLLSLRYNRLQGPIPESFGGLKSLNFVDMSNNNLSGT 629 (1049)
Q Consensus 557 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 629 (1049)
..+..|..+++|++|+|++|++++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|++...
T Consensus 233 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~Cd 305 (452)
T 3zyi_A 233 IRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCD 305 (452)
T ss_dssp ECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECS
T ss_pred cCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCC
Confidence 8888899999999999999999988899999999999999999999988888899999999999999998753
No 315
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=1.1e-28 Score=274.77 Aligned_cols=258 Identities=19% Similarity=0.179 Sum_probs=177.6
Q ss_pred hhhhcccCccccccCcccccccCCcEeccccCCccccCcccccccCCccEEEeCCCCccCCCcccccCCCcccEEcCCCc
Q 039290 100 AVLAIRNNSFFGSLPEELSHLRGLKYFDFRFNNFHIEIPSWFVSLPRLQHLLLKHNSFVGKIPETIGYLSLLQELDLSDN 179 (1049)
Q Consensus 100 ~~L~l~~n~~~g~~p~~~~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N 179 (1049)
+.++++++.+...++..+..+++|++|||++|++++..|..|.++++|++|+|++|.+++..| ++.+++|++|+|++|
T Consensus 13 ~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n 90 (317)
T 3o53_A 13 KIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNN 90 (317)
T ss_dssp EEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSS
T ss_pred eEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCC
Confidence 344556666654444444566778888888888887777788888888888888888876544 788888888888888
Q ss_pred cCccccCCCcccccccCCCCccceEEeeccccCCCCCCCcccccccceecccccccccccCCCCccccccceEEeccccc
Q 039290 180 QLSGTIPSSIFNISSCQNLPVLEGLFISYNQLTGPIPTNLWKCRELHVVSLAFNKFQGGIPRDIGNLTSVRNLFLGNNSL 259 (1049)
Q Consensus 180 ~l~g~ip~~~~~l~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 259 (1049)
++++ +|. .+.|++|++++|++++..+.. +++|+.|++++|++++..|..++.+++|++|+|++|++
T Consensus 91 ~l~~-l~~----------~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 156 (317)
T 3o53_A 91 YVQE-LLV----------GPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEI 156 (317)
T ss_dssp EEEE-EEE----------CTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCC
T ss_pred cccc-ccC----------CCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCC
Confidence 8873 331 245778888888887654443 45677777777777766666777777777777777777
Q ss_pred cccCccccc-cccceEEEeeccccCCCccccccccccccceEEeccCccCCCCCCcccCCCCCccEEEcCCCCCCCCCCc
Q 039290 260 IGEIPNEIG-NLRNLEVLGVQSSNLAGLIPASIFNISTLKELAVTDNDLLGSLPSSIDLGLPNLERLFLGENNFSGTIPS 338 (1049)
Q Consensus 260 ~~~~p~~l~-~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~ 338 (1049)
++..|..+. .+++|++|+|++|++++. | ....+++|++|++++|++.+ +|..+ ..+++|++|+|++|+++ .+|.
T Consensus 157 ~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~-l~~~~-~~l~~L~~L~L~~N~l~-~l~~ 231 (317)
T 3o53_A 157 DTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAF-MGPEF-QSAAGVTWISLRNNKLV-LIEK 231 (317)
T ss_dssp CEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCE-ECGGG-GGGTTCSEEECTTSCCC-EECT
T ss_pred CcccHHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCc-chhhh-cccCcccEEECcCCccc-chhh
Confidence 766666653 677777777777777665 2 22236677777777777763 44443 35677777777777777 4566
Q ss_pred cccCCCCCceeecccCccc-cCcccccccccccceeecccc
Q 039290 339 SLTNISELSVLDFGFNSFS-GLIPTTFGNLRSLKLLSLAGN 378 (1049)
Q Consensus 339 ~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N 378 (1049)
.+..+++|+.|++++|.+. +.+|..+..+++|+.|+++++
T Consensus 232 ~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~ 272 (317)
T 3o53_A 232 ALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTV 272 (317)
T ss_dssp TCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCc
Confidence 6777777777777777776 556666777777777777643
No 316
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.94 E-value=1.9e-26 Score=269.20 Aligned_cols=245 Identities=23% Similarity=0.265 Sum_probs=156.9
Q ss_pred eecccccccccccCCCCccccccceEEeccccccccCccccccccceEEEeeccccCCCccccccccccccceEEeccCc
Q 039290 227 VVSLAFNKFQGGIPRDIGNLTSVRNLFLGNNSLIGEIPNEIGNLRNLEVLGVQSSNLAGLIPASIFNISTLKELAVTDND 306 (1049)
Q Consensus 227 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~ 306 (1049)
.++.+++.++ .+|..+. ++++.|+|++|++++..+..|+++++|++|+|++|++.+..+..|.++++|++|+|++|+
T Consensus 47 ~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~ 123 (440)
T 3zyj_A 47 KVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNR 123 (440)
T ss_dssp EEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSC
T ss_pred EEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCc
Confidence 3444444443 3444433 355566666666665555566666666666666666665555566666666666666666
Q ss_pred cCCCCCCcccCCCCCccEEEcCCCCCCCCCCccccCCCCCceeecccC-ccccCcccccccccccceeecccccccCCCC
Q 039290 307 LLGSLPSSIDLGLPNLERLFLGENNFSGTIPSSLTNISELSVLDFGFN-SFSGLIPTTFGNLRSLKLLSLAGNVLTSPTP 385 (1049)
Q Consensus 307 l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 385 (1049)
++ .+|...+..+++|++|+|++|++++..+..|..+++|++|++++| .+....+..|.++++|++|+|++|.++.++.
T Consensus 124 l~-~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~ 202 (440)
T 3zyj_A 124 LT-TIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPN 202 (440)
T ss_dssp CS-SCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSCCC
T ss_pred CC-eeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCccccc
Confidence 65 444444445667777777777777555666777777777777773 4444444567777777777777777765432
Q ss_pred CcccccccccCCCCcEEEccCCccccCCCCccccccccccEEEccCCccccCCCCCCCCCCCccEEEccCCcccccCCcc
Q 039290 386 DLSFLSSLTSCRNLEIIYLSENPINGILPSSIGNFSISMKSLSMESCNISGGIPKELGNINNLTVIRLGNNELTGTIPVT 465 (1049)
Q Consensus 386 ~~~~l~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 465 (1049)
+..+++|+.|+|++|+++ +..|..|.++++|+.|+|++|++++..+..
T Consensus 203 -------~~~l~~L~~L~Ls~N~l~-------------------------~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 250 (440)
T 3zyj_A 203 -------LTPLIKLDELDLSGNHLS-------------------------AIRPGSFQGLMHLQKLWMIQSQIQVIERNA 250 (440)
T ss_dssp -------CTTCSSCCEEECTTSCCC-------------------------EECTTTTTTCTTCCEEECTTCCCCEECTTS
T ss_pred -------cCCCcccCEEECCCCccC-------------------------ccChhhhccCccCCEEECCCCceeEEChhh
Confidence 445555555555555554 445566667777777777777777777777
Q ss_pred ccCcCCCcceEeeccccCCCCCcccccccccceEEeeCcccC
Q 039290 466 LGRLQKLQGLYLQNNKLEGSIPEDLCHLYRLANLYLGDNKLS 507 (1049)
Q Consensus 466 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 507 (1049)
|..+++|++|+|++|+|++..+..|..+++|+.|+|++|++.
T Consensus 251 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 251 FDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp STTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred hcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 777777777777777777666666777777888888877765
No 317
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.94 E-value=2.8e-26 Score=275.21 Aligned_cols=269 Identities=26% Similarity=0.349 Sum_probs=165.6
Q ss_pred cccceEEeccCccCCCCCCcccCCCCCccEEEcCCCCCCCCCCccccCCCCCceeecccCccccCcccccccccccceee
Q 039290 295 STLKELAVTDNDLLGSLPSSIDLGLPNLERLFLGENNFSGTIPSSLTNISELSVLDFGFNSFSGLIPTTFGNLRSLKLLS 374 (1049)
Q Consensus 295 ~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 374 (1049)
.+++.|++++|.++ .+|..++ ++|++|+|++|+++ .+|. .+++|++|+|++|+|++ +|. .+++|++|+
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~---~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~ 107 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLP---AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELS 107 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCC---TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEE
T ss_pred CCCcEEEecCCCcC-ccChhhC---CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEE
Confidence 35788888888887 7777664 67888888888887 4554 45778888888888775 343 567777777
Q ss_pred cccccccCCCCCcccccccccCCCCcEEEccCCccccCCCCccccccccccEEEccCCccccCCCCCCCCCCCccEEEcc
Q 039290 375 LAGNVLTSPTPDLSFLSSLTSCRNLEIIYLSENPINGILPSSIGNFSISMKSLSMESCNISGGIPKELGNINNLTVIRLG 454 (1049)
Q Consensus 375 L~~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls 454 (1049)
+++|.++.++. .+++|+.|++++|++++ +|.. +++|++|+|+
T Consensus 108 Ls~N~l~~l~~---------~l~~L~~L~L~~N~l~~--------------------------lp~~---l~~L~~L~Ls 149 (622)
T 3g06_A 108 IFSNPLTHLPA---------LPSGLCKLWIFGNQLTS--------------------------LPVL---PPGLQELSVS 149 (622)
T ss_dssp ECSCCCCCCCC---------CCTTCCEEECCSSCCSC--------------------------CCCC---CTTCCEEECC
T ss_pred CcCCcCCCCCC---------CCCCcCEEECCCCCCCc--------------------------CCCC---CCCCCEEECc
Confidence 77777766543 23556666666666553 2221 2455555555
Q ss_pred CCcccccCCccccCcCCCcceEeeccccCCCCCcccccccccceEEeeCcccCCcCchhccCcccCCceeecCccccccc
Q 039290 455 NNELTGTIPVTLGRLQKLQGLYLQNNKLEGSIPEDLCHLYRLANLYLGDNKLSGRLPACLGNLTSLRDLSLGSNALTSII 534 (1049)
Q Consensus 455 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 534 (1049)
+|++++ +|. .+++|+.|++++|+|++ +| ..+++|+.|++++|.+++ +|.. +++|+.|++++|.++.+
T Consensus 150 ~N~l~~-l~~---~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~l- 216 (622)
T 3g06_A 150 DNQLAS-LPA---LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTSL- 216 (622)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSSC-
T ss_pred CCcCCC-cCC---ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCccccc-
Confidence 555553 232 22445555555555553 33 234555556666665553 3322 34566666666666542
Q ss_pred CcccccccccccccccCCccCCCCccCcCCCcceeEeecccccccccccccccCCCcccEEEeecccccCCccccccCcc
Q 039290 535 PSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALSGVIPVTIGGLQGLQLLSLRYNRLQGPIPESFGGLK 614 (1049)
Q Consensus 535 p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 614 (1049)
|.. +++|+.|++++|+|++ +| ..+++|++|+|++|+|+. +|. .+++|+.|+|++|+|+ .+|..|.+++
T Consensus 217 ~~~---~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~ 284 (622)
T 3g06_A 217 PAL---PSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLS 284 (622)
T ss_dssp CCC---CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSC
T ss_pred CCC---CCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhcc
Confidence 222 3556666666666665 23 334566777777777763 343 4567777777777777 5677777777
Q ss_pred CCcEEeccCccccCCccccccccc
Q 039290 615 SLNFVDMSNNNLSGTIPKSMEALS 638 (1049)
Q Consensus 615 ~L~~L~Ls~N~l~~~~p~~~~~l~ 638 (1049)
+|+.|+|++|++++.+|..+..++
T Consensus 285 ~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 285 SETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp TTCEEECCSCCCCHHHHHHHHHHH
T ss_pred ccCEEEecCCCCCCcCHHHHHhcc
Confidence 777777777777777776666554
No 318
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=2.7e-28 Score=291.06 Aligned_cols=186 Identities=18% Similarity=0.098 Sum_probs=132.8
Q ss_pred eecCCCcEEEEEEE-eCCCcEEEEEEeecccC----------CCHHHHHHHHHHHhhc-CCCceeeEEeeeecCCeeEEE
Q 039290 768 LLGMGSFGSVYKGV-LPDGMEIAAKVFHMEFD----------GSLESFHAECKVMGSI-RHRNLVKIISSCSNNDFKALV 835 (1049)
Q Consensus 768 ~lg~G~fg~Vy~a~-~~~~~~vavK~~~~~~~----------~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~~lv 835 (1049)
..+.|++|.+..++ ...|+.||+|++.+... ...+++.+|+++|+++ .|+||+++++++++++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 35667777666665 34688999999975431 1245799999999999 699999999999999999999
Q ss_pred EeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCc
Q 039290 836 LEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEE 915 (1049)
Q Consensus 836 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~ 915 (1049)
|||++|++|.+++...+. ++.. +|+.||++||+|+| ++|||||||||+|||++++|.+||+|||+|+......
T Consensus 321 MEyv~G~~L~d~i~~~~~-l~~~---~I~~QIl~AL~ylH---~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~ 393 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAGEE-IDRE---KILGSLLRSLAALE---KQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC 393 (569)
T ss_dssp EECCCSEEHHHHHHTTCC-CCHH---HHHHHHHHHHHHHH---HTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---
T ss_pred EecCCCCcHHHHHHhCCC-CCHH---HHHHHHHHHHHHHH---HCCceeccCchHhEEECCCCCEEEeecccCeeCCCCC
Confidence 999999999999987654 5553 58899999999999 9999999999999999999999999999998765433
Q ss_pred cccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCC
Q 039290 916 SMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPT 962 (1049)
Q Consensus 916 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~ 962 (1049)
. .....+||+.|||||++.+ .+..++|+|++|++.+++.++..|+
T Consensus 394 ~-~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 394 S-WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp C-CSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred c-cccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence 2 3345689999999999865 5678899999999998887765443
No 319
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=1.4e-28 Score=273.96 Aligned_cols=267 Identities=20% Similarity=0.224 Sum_probs=194.0
Q ss_pred CCceeecccCccccCcccccccccccceeecccccccCCCCCcccccccccCCCCcEEEccCCccccCCCCccccccccc
Q 039290 345 ELSVLDFGFNSFSGLIPTTFGNLRSLKLLSLAGNVLTSPTPDLSFLSSLTSCRNLEIIYLSENPINGILPSSIGNFSISM 424 (1049)
Q Consensus 345 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~~~~~L 424 (1049)
+++.++++.+.+.......+..+++|++|+|++|.++.++++ .+..+++|++|+|++|.+++.
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~-----~~~~l~~L~~L~Ls~n~l~~~------------ 73 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAA-----DLAPFTKLELLNLSSNVLYET------------ 73 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHH-----HHTTCTTCCEEECTTSCCEEE------------
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHH-----HhhCCCcCCEEECCCCcCCcc------------
Confidence 355667777777655555566666777777777777765432 355666666666666665532
Q ss_pred cEEEccCCccccCCCCCCCCCCCccEEEccCCcccccCCccccCcCCCcceEeeccccCCCCCcccccccccceEEeeCc
Q 039290 425 KSLSMESCNISGGIPKELGNINNLTVIRLGNNELTGTIPVTLGRLQKLQGLYLQNNKLEGSIPEDLCHLYRLANLYLGDN 504 (1049)
Q Consensus 425 ~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 504 (1049)
.+ +..+++|++|+|++|.+++.. ..++|++|++++|++++..+.. +++|++|++++|
T Consensus 74 -------------~~--~~~l~~L~~L~Ls~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N 130 (317)
T 3o53_A 74 -------------LD--LESLSTLRTLDLNNNYVQELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANN 130 (317)
T ss_dssp -------------EE--ETTCTTCCEEECCSSEEEEEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSS
T ss_pred -------------hh--hhhcCCCCEEECcCCcccccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCC
Confidence 22 556677777777777776432 2367777777777777544333 466777888888
Q ss_pred ccCCcCchhccCcccCCceeecCcccccccCcccc-cccccccccccCCccCCCCccCcCCCcceeEeeccccccccccc
Q 039290 505 KLSGRLPACLGNLTSLRDLSLGSNALTSIIPSTLW-NLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALSGVIP 583 (1049)
Q Consensus 505 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 583 (1049)
++++..+..++.+++|++|++++|++++..|..+. .+++|++|++++|.+++. +....+++|++|+|++|+|++. |
T Consensus 131 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~--~~~~~l~~L~~L~Ls~N~l~~l-~ 207 (317)
T 3o53_A 131 KITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV--KGQVVFAKLKTLDLSSNKLAFM-G 207 (317)
T ss_dssp CCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE--ECCCCCTTCCEEECCSSCCCEE-C
T ss_pred CCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc--ccccccccCCEEECCCCcCCcc-h
Confidence 88776666777778888888888888877666664 677888888888887764 2333578889999999999864 4
Q ss_pred ccccCCCcccEEEeecccccCCccccccCccCCcEEeccCcccc-CCcccccccccccceeeccC-CcccccCC
Q 039290 584 VTIGGLQGLQLLSLRYNRLQGPIPESFGGLKSLNFVDMSNNNLS-GTIPKSMEALSYLKHLNLSF-NQLEGEIP 655 (1049)
Q Consensus 584 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~l~l~~-N~l~~~~p 655 (1049)
..|..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+++ +.+|..+..+++|+.+++++ +.+.|..|
T Consensus 208 ~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~ 280 (317)
T 3o53_A 208 PEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNE 280 (317)
T ss_dssp GGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSS
T ss_pred hhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCch
Confidence 45889999999999999999 57888999999999999999998 77888899999999999984 45555544
No 320
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=2.9e-27 Score=278.52 Aligned_cols=236 Identities=20% Similarity=0.182 Sum_probs=155.4
Q ss_pred ccCCcEeccccCCccccCcccccccCCccEEEeCCCCccCCCcccccCCCcccEEcCCCccCccccCCCcccccccCCCC
Q 039290 120 LRGLKYFDFRFNNFHIEIPSWFVSLPRLQHLLLKHNSFVGKIPETIGYLSLLQELDLSDNQLSGTIPSSIFNISSCQNLP 199 (1049)
Q Consensus 120 L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~l~~l~ 199 (1049)
.++|++|+|++|++.+..|..|+.+++|++|+|++|.+++.+| ++.+++|++|||++|++++ +|. .+
T Consensus 33 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~~----------~~ 99 (487)
T 3oja_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQE-LLV----------GP 99 (487)
T ss_dssp GGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEE-EEE----------CT
T ss_pred CCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCC-CCC----------CC
Confidence 3378888888888887777788888888888888888876555 7888888888888888873 332 14
Q ss_pred ccceEEeeccccCCCCCCCcccccccceecccccccccccCCCCccccccceEEeccccccccCccccc-cccceEEEee
Q 039290 200 VLEGLFISYNQLTGPIPTNLWKCRELHVVSLAFNKFQGGIPRDIGNLTSVRNLFLGNNSLIGEIPNEIG-NLRNLEVLGV 278 (1049)
Q Consensus 200 ~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~-~l~~L~~L~L 278 (1049)
+|++|++++|++++..+.. +++|+.|+|++|++++..|..|+++++|++|+|++|.+++.+|..+. .+++|+.|+|
T Consensus 100 ~L~~L~L~~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~L 176 (487)
T 3oja_A 100 SIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNL 176 (487)
T ss_dssp TCCEEECCSSCCCCEEECC---CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEEC
T ss_pred CcCEEECcCCcCCCCCccc---cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEec
Confidence 5777788888777654433 35666677777777666666666777777777777777766666665 5666777777
Q ss_pred ccccCCCccccccccccccceEEeccCccCCCCCCcccCCCCCccEEEcCCCCCCCCCCccccCCCCCceeecccCccc-
Q 039290 279 QSSNLAGLIPASIFNISTLKELAVTDNDLLGSLPSSIDLGLPNLERLFLGENNFSGTIPSSLTNISELSVLDFGFNSFS- 357 (1049)
Q Consensus 279 ~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~- 357 (1049)
++|.+++..+ ...+++|+.|+|++|.+++ +|..+ ..+++|+.|+|++|.+++ +|..+..+++|+.|++++|.+.
T Consensus 177 s~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~-~~~~~-~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c 251 (487)
T 3oja_A 177 QYNFIYDVKG--QVVFAKLKTLDLSSNKLAF-MGPEF-QSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHC 251 (487)
T ss_dssp TTSCCCEEEC--CCCCTTCCEEECCSSCCCE-ECGGG-GGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCH
T ss_pred CCCccccccc--cccCCCCCEEECCCCCCCC-CCHhH-cCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcC
Confidence 7666665522 2235666666666666654 33332 245666666666666663 5555666666666666666665
Q ss_pred cCcccccccccccceeecc
Q 039290 358 GLIPTTFGNLRSLKLLSLA 376 (1049)
Q Consensus 358 ~~~p~~~~~l~~L~~L~L~ 376 (1049)
+.+|..+..+++|+.++++
T Consensus 252 ~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 252 GTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp HHHHHHHTTCHHHHHHHHH
T ss_pred cchHHHHHhCCCCcEEecc
Confidence 4455555666666665554
No 321
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=3.6e-27 Score=277.74 Aligned_cols=234 Identities=21% Similarity=0.247 Sum_probs=144.6
Q ss_pred CCcEEEccCCccccCCCCccccccccccEEEccCCccccCCCCCCCCCCCccEEEccCCcccccCCccccCcCCCcceEe
Q 039290 398 NLEIIYLSENPINGILPSSIGNFSISMKSLSMESCNISGGIPKELGNINNLTVIRLGNNELTGTIPVTLGRLQKLQGLYL 477 (1049)
Q Consensus 398 ~L~~L~Ls~N~i~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 477 (1049)
+|+.|+|++|.+++..|..+..+. +|+.|+|++|.+++..| +..+++|++|+|++|.|++..+ .++|++|++
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L 106 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFT-KLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHA 106 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCT-TCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEEC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCC-CCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEEC
Confidence 344444444444433333333332 44444444444444333 5666677777777777664322 266777777
Q ss_pred eccccCCCCCcccccccccceEEeeCcccCCcCchhccCcccCCceeecCcccccccCcccc-cccccccccccCCccCC
Q 039290 478 QNNKLEGSIPEDLCHLYRLANLYLGDNKLSGRLPACLGNLTSLRDLSLGSNALTSIIPSTLW-NLKDILRFNLSSNSLNG 556 (1049)
Q Consensus 478 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~ 556 (1049)
++|.|++..+. .+++|+.|+|++|.+++..|..++++++|+.|+|++|++++.+|..+. .+++|+.|+|++|.+++
T Consensus 107 ~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~ 183 (487)
T 3oja_A 107 ANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD 183 (487)
T ss_dssp CSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE
T ss_pred cCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcccc
Confidence 77777654443 245677777777777766666677777777777777777776666665 56777777777777665
Q ss_pred CCccCcCCCcceeEeecccccccccccccccCCCcccEEEeecccccCCccccccCccCCcEEeccCcccc-CCcccccc
Q 039290 557 SLLPDIGNLKVVIEMDLSLNALSGVIPVTIGGLQGLQLLSLRYNRLQGPIPESFGGLKSLNFVDMSNNNLS-GTIPKSME 635 (1049)
Q Consensus 557 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~ 635 (1049)
. +....+++|++|+|++|.|++..| .|..+++|+.|+|++|+|++ +|..+..+++|+.|++++|+++ +.+|..+.
T Consensus 184 ~--~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~ 259 (487)
T 3oja_A 184 V--KGQVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFS 259 (487)
T ss_dssp E--ECCCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHT
T ss_pred c--cccccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHH
Confidence 4 223346677777777777775433 46677777777777777774 5666777777777777777776 55666666
Q ss_pred cccccceeecc
Q 039290 636 ALSYLKHLNLS 646 (1049)
Q Consensus 636 ~l~~L~~l~l~ 646 (1049)
.++.|+.++++
T Consensus 260 ~l~~L~~l~~~ 270 (487)
T 3oja_A 260 KNQRVQTVAKQ 270 (487)
T ss_dssp TCHHHHHHHHH
T ss_pred hCCCCcEEecc
Confidence 67777766665
No 322
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=4.1e-26 Score=248.83 Aligned_cols=211 Identities=20% Similarity=0.205 Sum_probs=152.8
Q ss_pred CCccEEEccCCcccccCCccccCcCCCcceEeeccccCCCCCcccccccccceEEeeCcccCCcCchhccCcccCCceee
Q 039290 446 NNLTVIRLGNNELTGTIPVTLGRLQKLQGLYLQNNKLEGSIPEDLCHLYRLANLYLGDNKLSGRLPACLGNLTSLRDLSL 525 (1049)
Q Consensus 446 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 525 (1049)
++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|++++|++++..+..+.++++|++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 35666666666666555556666666666666666666555555666666666666666666555566666666777777
Q ss_pred cCcccccccCcccccccccccccccCCccCCC-CccCcCCCcceeEeecccccccccccccccCCCccc----EEEeecc
Q 039290 526 GSNALTSIIPSTLWNLKDILRFNLSSNSLNGS-LLPDIGNLKVVIEMDLSLNALSGVIPVTIGGLQGLQ----LLSLRYN 600 (1049)
Q Consensus 526 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~----~L~Ls~N 600 (1049)
++|++++..+..+..+++|++|++++|.+++. +|..+..+++|++|++++|++++..+..|..+.+|+ .|++++|
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n 187 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSS
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCC
Confidence 77777666665666777777777777777653 466777778888888888888877777777777777 8999999
Q ss_pred cccCCccccccCccCCcEEeccCccccCCcccccccccccceeeccCCcccccCCCC
Q 039290 601 RLQGPIPESFGGLKSLNFVDMSNNNLSGTIPKSMEALSYLKHLNLSFNQLEGEIPTR 657 (1049)
Q Consensus 601 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~ 657 (1049)
++++..+..+.. .+|++|+|++|++++..+..+..+++|+.|++++|+|.|.+|.-
T Consensus 188 ~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~l 243 (276)
T 2z62_A 188 PMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 243 (276)
T ss_dssp CCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTTT
T ss_pred cccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCCch
Confidence 999666665554 48999999999999766667889999999999999999998853
No 323
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.93 E-value=2.9e-30 Score=314.69 Aligned_cols=206 Identities=14% Similarity=0.174 Sum_probs=116.2
Q ss_pred CceeeeEEEcCCCCcEEEEEEeccccccccCC-CCCCcchhhhhhcccCcccccc---C------------cccccccCC
Q 039290 60 VCSWIGVTCGVRNRRVTALNISYLGLTGTIPP-QLGNLSFLAVLAIRNNSFFGSL---P------------EELSHLRGL 123 (1049)
Q Consensus 60 ~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~-~~~~l~~L~~L~l~~n~~~g~~---p------------~~~~~L~~L 123 (1049)
|++|.++.. .....+++.+.. +..|. .+..++.|+.|+++++.....+ | .-...+++|
T Consensus 34 ck~W~~~~~----~~~~~l~~~~~~--~~~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L 107 (594)
T 2p1m_B 34 CKSWYEIER----WCRRKVFIGNCY--AVSPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWL 107 (594)
T ss_dssp CHHHHHHHH----HHCCEEEESSTT--SSCHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTC
T ss_pred HHHHHHhhh----hhceEEeecccc--ccCHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCC
Confidence 457888821 122344454321 12221 2345567777888776432211 1 112467788
Q ss_pred cEeccccCCccccCccccc-ccCCccEEEeCCC-CccCC-CcccccCCCcccEEcCCCccCccccCCCcccccccCCCCc
Q 039290 124 KYFDFRFNNFHIEIPSWFV-SLPRLQHLLLKHN-SFVGK-IPETIGYLSLLQELDLSDNQLSGTIPSSIFNISSCQNLPV 200 (1049)
Q Consensus 124 ~~L~l~~n~~~~~~p~~~~-~l~~L~~L~L~~n-~l~~~-~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~l~~l~~ 200 (1049)
++|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+..+++|++|+|++|.+++..+..+..+. ..+++
T Consensus 108 ~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~--~~~~~ 185 (594)
T 2p1m_B 108 EEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFP--DTYTS 185 (594)
T ss_dssp CEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSC--TTCCC
T ss_pred CeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHh--hcCCc
Confidence 8888888888777776665 6788888888888 44422 455555788888888888887765544443322 24566
Q ss_pred cceEEeeccccCCCCCC-C----cccccccceecccccccccccCCCCccccccceEEeccc-------cccccCccccc
Q 039290 201 LEGLFISYNQLTGPIPT-N----LWKCRELHVVSLAFNKFQGGIPRDIGNLTSVRNLFLGNN-------SLIGEIPNEIG 268 (1049)
Q Consensus 201 L~~L~l~~N~l~~~~p~-~----l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N-------~l~~~~p~~l~ 268 (1049)
|++|++++|. +.++. . ...+++|+.|++++|...+.+|..+.++++|++|+++.+ .+.+ ++..++
T Consensus 186 L~~L~l~~~~--~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l~~~l~ 262 (594)
T 2p1m_B 186 LVSLNISCLA--SEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSG-LSVALS 262 (594)
T ss_dssp CCEEECTTCC--SCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHH-HHHHHH
T ss_pred CcEEEecccC--CcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHH-HHHHHh
Confidence 7788887776 22221 1 223466666666666222225555556666666663322 2332 233445
Q ss_pred cccceEEE
Q 039290 269 NLRNLEVL 276 (1049)
Q Consensus 269 ~l~~L~~L 276 (1049)
++++|+.|
T Consensus 263 ~~~~L~~L 270 (594)
T 2p1m_B 263 GCKELRCL 270 (594)
T ss_dssp TCTTCCEE
T ss_pred cCCCcccc
Confidence 55555555
No 324
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=6.4e-26 Score=246.17 Aligned_cols=217 Identities=22% Similarity=0.250 Sum_probs=121.4
Q ss_pred CCCceeeeEEEcCCCCcEEEEEEeccccccccCCCCCCcchhhhhhcccCccccccCcccccccCCcEeccccCCccccC
Q 039290 58 SSVCSWIGVTCGVRNRRVTALNISYLGLTGTIPPQLGNLSFLAVLAIRNNSFFGSLPEELSHLRGLKYFDFRFNNFHIEI 137 (1049)
Q Consensus 58 ~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~l~~n~~~g~~p~~~~~L~~L~~L~l~~n~~~~~~ 137 (1049)
.++|.|.|+.|.-. ..++.+++++++++ .+|..+. +.|++|+|++|++++..|..++++++|++|++++|+++...
T Consensus 2 ~~~C~~~~~~C~c~-~~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~ 77 (270)
T 2o6q_A 2 EALCKKDGGVCSCN-NNKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLP 77 (270)
T ss_dssp CCCBGGGTCSBEEE-TTTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCC
T ss_pred CccCCCCCCCCEeC-CCCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeC
Confidence 47899999998542 23456778887777 4665443 34555555555554333334455555555555555554333
Q ss_pred cccccccCCccEEEeCCCCccCCCcccccCCCcccEEcCCCccCccccCCCcccccccCCCCccceEEeeccccCCCCCC
Q 039290 138 PSWFVSLPRLQHLLLKHNSFVGKIPETIGYLSLLQELDLSDNQLSGTIPSSIFNISSCQNLPVLEGLFISYNQLTGPIPT 217 (1049)
Q Consensus 138 p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~l~~l~~L~~L~l~~N~l~~~~p~ 217 (1049)
+..|.++++|++|+|++|.+++..+..++.+++|++| ++++|++++..|.
T Consensus 78 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L------------------------------~l~~n~l~~~~~~ 127 (270)
T 2o6q_A 78 AGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAEL------------------------------RLDRNQLKSLPPR 127 (270)
T ss_dssp TTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEE------------------------------ECCSSCCCCCCTT
T ss_pred hhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEE------------------------------ECCCCccCeeCHH
Confidence 3334445555555555555443333344444444444 4544444444444
Q ss_pred CcccccccceecccccccccccCCCCccccccceEEeccccccccCccccccccceEEEeeccccCCCcccccccccccc
Q 039290 218 NLWKCRELHVVSLAFNKFQGGIPRDIGNLTSVRNLFLGNNSLIGEIPNEIGNLRNLEVLGVQSSNLAGLIPASIFNISTL 297 (1049)
Q Consensus 218 ~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L 297 (1049)
.+..+++|++|+|++|++++..+..|+.+++|++|+|++|++++..+..|.++++|+.|+|++|++++..+..+..+++|
T Consensus 128 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 207 (270)
T 2o6q_A 128 VFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKL 207 (270)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTC
T ss_pred HhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCC
Confidence 44455555555555555554444445566666666666666665555556666666666666666665555556666666
Q ss_pred ceEEeccCccC
Q 039290 298 KELAVTDNDLL 308 (1049)
Q Consensus 298 ~~L~l~~N~l~ 308 (1049)
+.|++++|.+.
T Consensus 208 ~~L~l~~N~~~ 218 (270)
T 2o6q_A 208 KMLQLQENPWD 218 (270)
T ss_dssp CEEECCSSCBC
T ss_pred CEEEecCCCee
Confidence 66666666654
No 325
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.93 E-value=7.1e-29 Score=302.39 Aligned_cols=208 Identities=15% Similarity=0.110 Sum_probs=120.6
Q ss_pred CCCCCCccEEEccCCccccc-CCccccCcCCCcceEeec---------cccCCCCCcccc-cccccceEEeeCcccCCcC
Q 039290 442 LGNINNLTVIRLGNNELTGT-IPVTLGRLQKLQGLYLQN---------NKLEGSIPEDLC-HLYRLANLYLGDNKLSGRL 510 (1049)
Q Consensus 442 ~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L~~---------N~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~ 510 (1049)
+..+++|+.|++++| ++.. ++.....+++|++|++++ +.+++.....+. .+++|+.|.++.|.+++..
T Consensus 310 ~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~ 388 (594)
T 2p1m_B 310 LCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAA 388 (594)
T ss_dssp HTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHH
T ss_pred HhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHH
Confidence 345566666666666 3321 112222456666666633 333322222222 3566777777777766555
Q ss_pred chhcc-CcccCCceeec--C----cccccc-----cCcccccccccccccccCCccCCCCccCcCC-CcceeEeeccccc
Q 039290 511 PACLG-NLTSLRDLSLG--S----NALTSI-----IPSTLWNLKDILRFNLSSNSLNGSLLPDIGN-LKVVIEMDLSLNA 577 (1049)
Q Consensus 511 p~~~~-~l~~L~~L~L~--~----N~l~~~-----~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L~Ls~N~ 577 (1049)
+..+. .+++|+.|+++ + |.+++. ++..+..+++|++|++++ .+++..+..+.. +++|++|+|++|.
T Consensus 389 ~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~ 467 (594)
T 2p1m_B 389 LITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAG 467 (594)
T ss_dssp HHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCC
T ss_pred HHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCC
Confidence 44444 46677777777 3 455421 122245566777777766 555444444444 6777788888887
Q ss_pred ccccccccc-cCCCcccEEEeecccccCCccc-cccCccCCcEEeccCccccCCccccc-ccccccceeeccCCccc
Q 039290 578 LSGVIPVTI-GGLQGLQLLSLRYNRLQGPIPE-SFGGLKSLNFVDMSNNNLSGTIPKSM-EALSYLKHLNLSFNQLE 651 (1049)
Q Consensus 578 l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~l~l~~N~l~ 651 (1049)
+++..+..+ .++++|+.|+|++|++++.... ....+++|++|++++|+++..-...+ ..+++|+...+..+.-.
T Consensus 468 i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~~~ 544 (594)
T 2p1m_B 468 DSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERGAP 544 (594)
T ss_dssp SSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSSSCG
T ss_pred CcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCCcc
Confidence 766555544 5678888888888888654433 44557888888888887754433333 45566666666655443
No 326
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=5.2e-25 Score=238.99 Aligned_cols=206 Identities=24% Similarity=0.287 Sum_probs=145.5
Q ss_pred ccEEEccCCcccccCCccccCcCCCcceEeeccccCCCCCcccccccccceEEeeCcccCCcCchhccCcccCCceeecC
Q 039290 448 LTVIRLGNNELTGTIPVTLGRLQKLQGLYLQNNKLEGSIPEDLCHLYRLANLYLGDNKLSGRLPACLGNLTSLRDLSLGS 527 (1049)
Q Consensus 448 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 527 (1049)
.+.+++++|+++ .+|..+. ++|++|+|++|++++..+..|..+++|++|++++|.++...+..|.++++|++|++++
T Consensus 18 ~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~ 94 (270)
T 2o6q_A 18 KNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTD 94 (270)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCS
T ss_pred CCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCC
Confidence 445555555555 2443332 3455555555555544444555566666666666666544444456666666666666
Q ss_pred cccccccCcccccccccccccccCCccCCCCccCcCCCcceeEeecccccccccccccccCCCcccEEEeecccccCCcc
Q 039290 528 NALTSIIPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALSGVIPVTIGGLQGLQLLSLRYNRLQGPIP 607 (1049)
Q Consensus 528 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~ 607 (1049)
|+++++.+..+..+++|++|++++|++++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|++++..+
T Consensus 95 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 174 (270)
T 2o6q_A 95 NKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPE 174 (270)
T ss_dssp SCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeCh
Confidence 66666666666666777777777777776666667777788888888888887766778888889999999998888777
Q ss_pred ccccCccCCcEEeccCccccCCcccccccccccceeeccCCcccccCCC
Q 039290 608 ESFGGLKSLNFVDMSNNNLSGTIPKSMEALSYLKHLNLSFNQLEGEIPT 656 (1049)
Q Consensus 608 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~ 656 (1049)
..|.++++|++|+|++|++++..+..+..+++|+.|++++|+|.|.++.
T Consensus 175 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 223 (270)
T 2o6q_A 175 GAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCNG 223 (270)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSSS
T ss_pred hHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCcc
Confidence 7888889999999999999866666788889999999999999888764
No 327
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=8.3e-25 Score=238.42 Aligned_cols=208 Identities=23% Similarity=0.275 Sum_probs=133.8
Q ss_pred cccEEEccCCccccCCCCCCCCCCCccEEEccCCcccccCCccccCcCCCcceEeeccccCCCCCcccccccccceEEee
Q 039290 423 SMKSLSMESCNISGGIPKELGNINNLTVIRLGNNELTGTIPVTLGRLQKLQGLYLQNNKLEGSIPEDLCHLYRLANLYLG 502 (1049)
Q Consensus 423 ~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 502 (1049)
++++|++++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|++++..+..+..+++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 44455555555554444455555556666666665555555555555566666666666555555555555666666666
Q ss_pred CcccCCcCchhccCcccCCceeecCcccccc-cCcccccccccccccccCCccCCCCccCcCCCccee----Eeeccccc
Q 039290 503 DNKLSGRLPACLGNLTSLRDLSLGSNALTSI-IPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVI----EMDLSLNA 577 (1049)
Q Consensus 503 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~----~L~Ls~N~ 577 (1049)
+|.+++..+..++++++|++|++++|++++. +|..+..+++|++|++++|++++..+..+..+.+|+ +|++++|+
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~ 188 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSC
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCc
Confidence 6665544444555566666666666666553 355566666666666666666555555555554444 78888888
Q ss_pred ccccccccccCCCcccEEEeecccccCCccccccCccCCcEEeccCccccCCcc
Q 039290 578 LSGVIPVTIGGLQGLQLLSLRYNRLQGPIPESFGGLKSLNFVDMSNNNLSGTIP 631 (1049)
Q Consensus 578 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 631 (1049)
+++..+..+.. .+|+.|+|++|++++..+..|.++++|++|+|++|++++..|
T Consensus 189 l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 189 MNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp CCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred ccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 88665555554 489999999999998877888999999999999999986543
No 328
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=7.8e-25 Score=239.64 Aligned_cols=207 Identities=26% Similarity=0.245 Sum_probs=156.9
Q ss_pred CCCCCCccEEEccCCcccccCCccccCcCCCcceEeeccccCCCCCcccccccccceEEeeCcccCCcCchhccCcccCC
Q 039290 442 LGNINNLTVIRLGNNELTGTIPVTLGRLQKLQGLYLQNNKLEGSIPEDLCHLYRLANLYLGDNKLSGRLPACLGNLTSLR 521 (1049)
Q Consensus 442 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 521 (1049)
+.++++++++++++|+++ .+|..+. ++++.|+|++|+|++..+..|..+++|++|+|++|.+++ ++.. +.+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~-~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQVD-GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EECC-SCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCc-ccCC-CCCCcCC
Confidence 345566666666666666 3444433 466677777777766666666677777777777777764 3322 6677777
Q ss_pred ceeecCcccccccCcccccccccccccccCCccCCCCccCcCCCcceeEeecccccccccccccccCCCcccEEEeeccc
Q 039290 522 DLSLGSNALTSIIPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALSGVIPVTIGGLQGLQLLSLRYNR 601 (1049)
Q Consensus 522 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 601 (1049)
+|++++|+++. +|..+..+++|++|++++|++++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+
T Consensus 81 ~L~Ls~N~l~~-l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 159 (290)
T 1p9a_G 81 TLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (290)
T ss_dssp EEECCSSCCSS-CCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred EEECCCCcCCc-CchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCc
Confidence 77777777774 56677777788888888888877777778888888888888888887777788888999999999999
Q ss_pred ccCCccccccCccCCcEEeccCccccCCcccccccccccceeeccCCcccccCC
Q 039290 602 LQGPIPESFGGLKSLNFVDMSNNNLSGTIPKSMEALSYLKHLNLSFNQLEGEIP 655 (1049)
Q Consensus 602 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p 655 (1049)
|++..+..|.++++|++|+|++|+|+ .+|..+..+.+|+.++|++|+|.|.+.
T Consensus 160 l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~c~ 212 (290)
T 1p9a_G 160 LTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCNCE 212 (290)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCSGG
T ss_pred CCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCcCc
Confidence 99777778888999999999999998 788888888899999999999988763
No 329
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=2e-24 Score=234.55 Aligned_cols=231 Identities=22% Similarity=0.232 Sum_probs=130.2
Q ss_pred CcchhhhhhcccCccccccCcccccccCCcEeccccCCccccCcccccccCCccEEEeCCCCccCCCcccccCCCcccEE
Q 039290 95 NLSFLAVLAIRNNSFFGSLPEELSHLRGLKYFDFRFNNFHIEIPSWFVSLPRLQHLLLKHNSFVGKIPETIGYLSLLQEL 174 (1049)
Q Consensus 95 ~l~~L~~L~l~~n~~~g~~p~~~~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 174 (1049)
.+..+..+++..+.+... ..+..+++|+.|++++|.+. .++ .+..+++|++|+|++|.+++ + +.++.+++|++|
T Consensus 17 ~~~~l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~-~~~-~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L 90 (272)
T 3rfs_A 17 AFAETIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIK-SVQ-GIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYL 90 (272)
T ss_dssp HHHHHHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCC-CCT-TGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEE
T ss_pred hHHHHHHHHhcCcccccc--cccccccceeeeeeCCCCcc-ccc-ccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEE
Confidence 344566667777666533 23556677777777777665 232 46667777777777777664 3 356666777777
Q ss_pred cCCCccCccccCCCcccccccCCCCccceEEeeccccCCCCCCCcccccccceecccccccccccCCCCccccccceEEe
Q 039290 175 DLSDNQLSGTIPSSIFNISSCQNLPVLEGLFISYNQLTGPIPTNLWKCRELHVVSLAFNKFQGGIPRDIGNLTSVRNLFL 254 (1049)
Q Consensus 175 ~Ls~N~l~g~ip~~~~~l~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 254 (1049)
+|++|++++..|..+. ++++|++|++++|++++..|..+..+++|++|++++|++++..|..++.+++|++|+|
T Consensus 91 ~L~~n~l~~~~~~~~~------~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 164 (272)
T 3rfs_A 91 ILTGNQLQSLPNGVFD------KLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDL 164 (272)
T ss_dssp ECTTSCCCCCCTTTTT------TCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred ECCCCccCccChhHhc------CCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEEC
Confidence 7777766633332222 2344556666666655444444444555555555555554444444444444444444
Q ss_pred ccccccccCccccccccceEEEeeccccCCCccccccccccccceEEeccCccCCCCCCcccCCCCCccEEEcCCCCCCC
Q 039290 255 GNNSLIGEIPNEIGNLRNLEVLGVQSSNLAGLIPASIFNISTLKELAVTDNDLLGSLPSSIDLGLPNLERLFLGENNFSG 334 (1049)
Q Consensus 255 ~~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~ 334 (1049)
++| ++++..+..+..+++|++|++++|++.+ +|...+..+++|++|++++|.+.+
T Consensus 165 ~~n------------------------~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~l~~N~~~~ 219 (272)
T 3rfs_A 165 SYN------------------------QLQSLPEGVFDKLTQLKDLRLYQNQLKS-VPDGVFDRLTSLQYIWLHDNPWDC 219 (272)
T ss_dssp CSS------------------------CCCCCCTTTTTTCTTCCEEECCSSCCSC-CCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCC------------------------CcCccCHHHhcCCccCCEEECCCCcCCc-cCHHHHhCCcCCCEEEccCCCccc
Confidence 444 4444444444455555555555555553 222333355666666666666553
Q ss_pred CCCccccCCCCCceeecccCccccCcccccccccc
Q 039290 335 TIPSSLTNISELSVLDFGFNSFSGLIPTTFGNLRS 369 (1049)
Q Consensus 335 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 369 (1049)
. +++|+.|+++.|.++|.+|..++.+..
T Consensus 220 ~-------~~~l~~l~~~~n~~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 220 T-------CPGIRYLSEWINKHSGVVRNSAGSVAP 247 (272)
T ss_dssp C-------TTTTHHHHHHHHHTGGGBBCTTSCBCG
T ss_pred c-------CcHHHHHHHHHHhCCCcccCcccccCC
Confidence 3 346777777777777777777766654
No 330
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=1.4e-24 Score=235.72 Aligned_cols=160 Identities=26% Similarity=0.294 Sum_probs=99.2
Q ss_pred cccccccceEEeeCcccCCcCchhccCcccCCceeecCcccccccCcccccccccccccccCCccCCCCccCcCCCccee
Q 039290 490 LCHLYRLANLYLGDNKLSGRLPACLGNLTSLRDLSLGSNALTSIIPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVI 569 (1049)
Q Consensus 490 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 569 (1049)
+..+++|++|++++|.+++..+..++++++|++|++++|++++..+..+..+++|++|++++|++++..+..++.+++|+
T Consensus 81 l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 160 (272)
T 3rfs_A 81 LKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLT 160 (272)
T ss_dssp GTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred hcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCC
Confidence 33444444444444444433334444444555555555555544444455555555555555555554444555666666
Q ss_pred EeecccccccccccccccCCCcccEEEeecccccCCccccccCccCCcEEeccCccccCCcccccccccccceeeccCCc
Q 039290 570 EMDLSLNALSGVIPVTIGGLQGLQLLSLRYNRLQGPIPESFGGLKSLNFVDMSNNNLSGTIPKSMEALSYLKHLNLSFNQ 649 (1049)
Q Consensus 570 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~N~ 649 (1049)
+|++++|++++..+..|+.+++|+.|+|++|++++..|..|..+++|++|+|++|++++. +++|++++++.|.
T Consensus 161 ~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~ 233 (272)
T 3rfs_A 161 ELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINK 233 (272)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHH
T ss_pred EEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHh
Confidence 666666666666666677777778888888887777777777788888888888877654 3457777888888
Q ss_pred ccccCCC
Q 039290 650 LEGEIPT 656 (1049)
Q Consensus 650 l~~~~p~ 656 (1049)
++|.+|.
T Consensus 234 ~~g~ip~ 240 (272)
T 3rfs_A 234 HSGVVRN 240 (272)
T ss_dssp TGGGBBC
T ss_pred CCCcccC
Confidence 8888775
No 331
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.91 E-value=1.4e-24 Score=257.53 Aligned_cols=185 Identities=15% Similarity=0.177 Sum_probs=146.2
Q ss_pred CCCceecCCCcEEEEEEEeCCCcEEEEEEeecccCC--------CHHHHHHHHHHHhhcCCCceeeEEeeeecCCeeEEE
Q 039290 764 SENKLLGMGSFGSVYKGVLPDGMEIAAKVFHMEFDG--------SLESFHAECKVMGSIRHRNLVKIISSCSNNDFKALV 835 (1049)
Q Consensus 764 ~~~~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~~~--------~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 835 (1049)
...+.||+|+||+||+|+. .++.+++|+....... ..+++.+|++++++++||||+++..++...+..++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 4467899999999999954 6788999886543221 134579999999999999999666666677778999
Q ss_pred EeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCc
Q 039290 836 LEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEE 915 (1049)
Q Consensus 836 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~ 915 (1049)
|||+++++|.+++.. +..++.|+++|++||| +++|+||||||+||+++. .+||+|||+++......
T Consensus 418 mE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH---~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~ 483 (540)
T 3en9_A 418 MSYINGKLAKDVIED---------NLDIAYKIGEIVGKLH---KNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDE 483 (540)
T ss_dssp EECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHH---HTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHH
T ss_pred EECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHH---HCcCccCCCCHHHEEECC--eEEEEECccCEECCCcc
Confidence 999999999998875 5689999999999999 999999999999999999 99999999999875533
Q ss_pred ccc------ccccccccCcccccccCC--CCcCcccchHHHHHHHHHHHhCCCCCC
Q 039290 916 SMR------QTKTLGTIGYMAPEYGRE--GKVSRKCDVYSYGIMLMETFTKKKPTD 963 (1049)
Q Consensus 916 ~~~------~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslG~il~elltg~~p~~ 963 (1049)
... .....||+.|||||++.. ..|+..+|+|+..+-..+...++.+|.
T Consensus 484 ~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 484 DKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred ccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 211 234679999999999976 568888999999998888888777664
No 332
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.90 E-value=2.4e-23 Score=227.84 Aligned_cols=205 Identities=24% Similarity=0.266 Sum_probs=138.9
Q ss_pred cccCCCCcEEEccCCccccCCCCccccccccccEEEccCCccccCCCCCCCCCCCccEEEccCCcccccCCccccCcCCC
Q 039290 393 LTSCRNLEIIYLSENPINGILPSSIGNFSISMKSLSMESCNISGGIPKELGNINNLTVIRLGNNELTGTIPVTLGRLQKL 472 (1049)
Q Consensus 393 l~~l~~L~~L~Ls~N~i~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 472 (1049)
+..+++++.+++++|.++.+ |. .+. ++++.|+|++|.+++..|..|..+++|
T Consensus 6 ~~~l~~l~~l~~~~~~l~~i-p~-------------------------~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L 57 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLTAL-PP-------------------------DLP--KDTTILHLSENLLYTFSLATLMPYTRL 57 (290)
T ss_dssp EECSTTCCEEECTTSCCSSC-CS-------------------------CCC--TTCCEEECTTSCCSEEEGGGGTTCTTC
T ss_pred ccccCCccEEECCCCCCCcC-CC-------------------------CCC--CCCCEEEcCCCcCCccCHHHhhcCCCC
Confidence 45566677777777776632 22 221 345555555555555445555555555
Q ss_pred cceEeeccccCCCCCcccccccccceEEeeCcccCCcCchhccCcccCCceeecCcccccccCcccccccccccccccCC
Q 039290 473 QGLYLQNNKLEGSIPEDLCHLYRLANLYLGDNKLSGRLPACLGNLTSLRDLSLGSNALTSIIPSTLWNLKDILRFNLSSN 552 (1049)
Q Consensus 473 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 552 (1049)
++|+|++|+|++. +.. ..+++|++|++++|+++ .+|..+..+++|++|++++|+++++.|..|..+++|++|+|++|
T Consensus 58 ~~L~L~~n~l~~~-~~~-~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N 134 (290)
T 1p9a_G 58 TQLNLDRAELTKL-QVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGN 134 (290)
T ss_dssp CEEECTTSCCCEE-ECC-SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTS
T ss_pred CEEECCCCccCcc-cCC-CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCC
Confidence 5555555555532 221 45556666666666665 45556666667777777777777666666777777777777777
Q ss_pred ccCCCCccCcCCCcceeEeecccccccccccccccCCCcccEEEeecccccCCccccccCccCCcEEeccCccccCC
Q 039290 553 SLNGSLLPDIGNLKVVIEMDLSLNALSGVIPVTIGGLQGLQLLSLRYNRLQGPIPESFGGLKSLNFVDMSNNNLSGT 629 (1049)
Q Consensus 553 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 629 (1049)
++++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+.+|+.|+|++|++.+.
T Consensus 135 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 135 ELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp CCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred CCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCc
Confidence 777666666777788888888888888766677788889999999999998 6777777888999999999998753
No 333
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.90 E-value=4.6e-26 Score=256.21 Aligned_cols=268 Identities=18% Similarity=0.212 Sum_probs=156.4
Q ss_pred CCCceeeeEEEcCCCCcEEEEEEeccccccccCCCCCCc--chhhhhhcccCccccccCcccccccCCcEeccccCCccc
Q 039290 58 SSVCSWIGVTCGVRNRRVTALNISYLGLTGTIPPQLGNL--SFLAVLAIRNNSFFGSLPEELSHLRGLKYFDFRFNNFHI 135 (1049)
Q Consensus 58 ~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~~~~l--~~L~~L~l~~n~~~g~~p~~~~~L~~L~~L~l~~n~~~~ 135 (1049)
.-|.+|.++.|+.. .+..++++++.+. |..++.+ +.++.|++++|.+.+..|. +.++++|++|++++|++.+
T Consensus 34 ~vc~~W~~~~~~~~--~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~ 107 (336)
T 2ast_B 34 GVCKRWYRLASDES--LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEV 107 (336)
T ss_dssp SSCHHHHHHHTCST--TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECH
T ss_pred HHHHHHHHHhcCch--hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCH
Confidence 34558999998643 4567788777665 2334444 5666777777776655443 4566777777777776665
Q ss_pred c-CcccccccCCccEEEeCCCCccCCCcccccCCCcccEEcCCCc-cCccc-cCCCcccccccCCCCccceEEeecc-cc
Q 039290 136 E-IPSWFVSLPRLQHLLLKHNSFVGKIPETIGYLSLLQELDLSDN-QLSGT-IPSSIFNISSCQNLPVLEGLFISYN-QL 211 (1049)
Q Consensus 136 ~-~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N-~l~g~-ip~~~~~l~~l~~l~~L~~L~l~~N-~l 211 (1049)
. +|..+..+++|++|+|++|.+++..|..++.+++|++|+|++| .+++. +|..+. ++++|++|++++| .+
T Consensus 108 ~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~------~~~~L~~L~l~~~~~l 181 (336)
T 2ast_B 108 STLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLS------SCSRLDELNLSWCFDF 181 (336)
T ss_dssp HHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHH------HCTTCCEEECCCCTTC
T ss_pred HHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHh------cCCCCCEEcCCCCCCc
Confidence 4 6666666777777777777666666666666777777777766 45542 333222 2344555555555 55
Q ss_pred CCCCCCCcccccccceecccccccccccCCCCcccc-ccceEEeccc--ccc-ccCccccccccceEEEeecccc-CCCc
Q 039290 212 TGPIPTNLWKCRELHVVSLAFNKFQGGIPRDIGNLT-SVRNLFLGNN--SLI-GEIPNEIGNLRNLEVLGVQSSN-LAGL 286 (1049)
Q Consensus 212 ~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N--~l~-~~~p~~l~~l~~L~~L~L~~n~-l~~~ 286 (1049)
++. .++..+..++ +|++|+|++| .++ +.+|..++++++|+.|++++|. +++.
T Consensus 182 ~~~-----------------------~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~ 238 (336)
T 2ast_B 182 TEK-----------------------HVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKND 238 (336)
T ss_dssp CHH-----------------------HHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGG
T ss_pred ChH-----------------------HHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHH
Confidence 432 1334444455 5555555555 233 3444455555555555555555 4444
Q ss_pred cccccccccccceEEeccCccCCCCCCc--ccCCCCCccEEEcCCCCCCCCCCccccCC-CCCceeecccCccccCcccc
Q 039290 287 IPASIFNISTLKELAVTDNDLLGSLPSS--IDLGLPNLERLFLGENNFSGTIPSSLTNI-SELSVLDFGFNSFSGLIPTT 363 (1049)
Q Consensus 287 ~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~ 363 (1049)
.+..+.++++|++|++++|. +..+.. ....+++|++|++++| ++ ...+..+ .++..|++++|++++..|..
T Consensus 239 ~~~~l~~l~~L~~L~l~~~~--~~~~~~~~~l~~~~~L~~L~l~~~-i~---~~~~~~l~~~l~~L~l~~n~l~~~~~~~ 312 (336)
T 2ast_B 239 CFQEFFQLNYLQHLSLSRCY--DIIPETLLELGEIPTLKTLQVFGI-VP---DGTLQLLKEALPHLQINCSHFTTIARPT 312 (336)
T ss_dssp GGGGGGGCTTCCEEECTTCT--TCCGGGGGGGGGCTTCCEEECTTS-SC---TTCHHHHHHHSTTSEESCCCSCCTTCSS
T ss_pred HHHHHhCCCCCCEeeCCCCC--CCCHHHHHHHhcCCCCCEEeccCc-cC---HHHHHHHHhhCcceEEecccCccccCCc
Confidence 45555555666666666654 111111 1224677777777777 32 2233344 34777778888888877777
Q ss_pred ccc
Q 039290 364 FGN 366 (1049)
Q Consensus 364 ~~~ 366 (1049)
++.
T Consensus 313 ~~~ 315 (336)
T 2ast_B 313 IGN 315 (336)
T ss_dssp CSS
T ss_pred ccc
Confidence 664
No 334
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.89 E-value=1.5e-23 Score=224.73 Aligned_cols=190 Identities=21% Similarity=0.266 Sum_probs=108.8
Q ss_pred CCceeeeEEEcCCCCcEEEEEEeccccccccCCCCCCcchhhhhhcccCccccccCcccccccCCcEeccccCCccccCc
Q 039290 59 SVCSWIGVTCGVRNRRVTALNISYLGLTGTIPPQLGNLSFLAVLAIRNNSFFGSLPEELSHLRGLKYFDFRFNNFHIEIP 138 (1049)
Q Consensus 59 ~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~l~~n~~~g~~p~~~~~L~~L~~L~l~~n~~~~~~p 138 (1049)
+||.|.|.+|... ...+++++++++ .+|..+. +.++.|+|++|++.+..|..++++++|++|+|++|++.+..|
T Consensus 3 ~Cp~~~gC~C~~~---~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 76 (251)
T 3m19_A 3 TCETVTGCTCNEG---KKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSA 76 (251)
T ss_dssp -CHHHHSSEEEGG---GTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCT
T ss_pred cCCCCCceEcCCC---CeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCH
Confidence 6889999999532 235788888887 6776554 456666666666665555566666666666666666666555
Q ss_pred ccccccCCccEEEeCCCCccCCCcccccCCCcccEEcCCCccCccccCCCcccccccCCCCccceEEeeccccCCCCCCC
Q 039290 139 SWFVSLPRLQHLLLKHNSFVGKIPETIGYLSLLQELDLSDNQLSGTIPSSIFNISSCQNLPVLEGLFISYNQLTGPIPTN 218 (1049)
Q Consensus 139 ~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~l~~l~~L~~L~l~~N~l~~~~p~~ 218 (1049)
..|..+++|++|+|++|.+++..|..++.+++|++|+|++|+++ .+|...+ .++++|++|+|++|++++..+..
T Consensus 77 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~-----~~l~~L~~L~Ls~N~l~~~~~~~ 150 (251)
T 3m19_A 77 GVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLK-SLPSGVF-----DRLTKLKELRLNTNQLQSIPAGA 150 (251)
T ss_dssp TTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTT-----TTCTTCCEEECCSSCCCCCCTTT
T ss_pred hHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCC-CcChhHh-----ccCCcccEEECcCCcCCccCHHH
Confidence 55666666666666666666555555566666666666666665 3333221 12344555555555555433334
Q ss_pred cccccccceecccccccccccCCCCccccccceEEecccccc
Q 039290 219 LWKCRELHVVSLAFNKFQGGIPRDIGNLTSVRNLFLGNNSLI 260 (1049)
Q Consensus 219 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 260 (1049)
+..+++|++|+|++|++++..|..|..+++|++|+|++|.+.
T Consensus 151 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 192 (251)
T 3m19_A 151 FDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFD 192 (251)
T ss_dssp TTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBC
T ss_pred cCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCcee
Confidence 444444444444444444443444444444444444444444
No 335
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.89 E-value=7.1e-24 Score=251.12 Aligned_cols=208 Identities=25% Similarity=0.369 Sum_probs=171.8
Q ss_pred cCCCCCCCc-----eeeeE-EEcCCCCcEEEEEEeccccccccCCCCCCcchhhhhhcccCccccccCcccccccCCcEe
Q 039290 53 NWSTTSSVC-----SWIGV-TCGVRNRRVTALNISYLGLTGTIPPQLGNLSFLAVLAIRNNSFFGSLPEELSHLRGLKYF 126 (1049)
Q Consensus 53 ~w~~~~~~c-----~w~gv-~c~~~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~l~~n~~~g~~p~~~~~L~~L~~L 126 (1049)
+|..+.++| .|.|+ .|.. ++++.|+|+++++++ +|+.+. ++|++|+|++|.++ .+| ..+++|++|
T Consensus 35 ~W~~~~~~~~~~~~~~~~l~~C~~--~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L 105 (571)
T 3cvr_A 35 KWEKQALPGENRNEAVSLLKECLI--NQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYL 105 (571)
T ss_dssp HHHTTCCTTCCHHHHHHHHHHHHH--TTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEE
T ss_pred HHhccCCccccccchhhhcccccc--CCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEE
Confidence 566666777 79999 7863 478999999999996 888775 78999999999998 788 567899999
Q ss_pred ccccCCccccCcccccccCCccEEEeCCCCccCCCcccccCCCcccEEcCCCccCccccCCCcccccccCCCCccceEEe
Q 039290 127 DFRFNNFHIEIPSWFVSLPRLQHLLLKHNSFVGKIPETIGYLSLLQELDLSDNQLSGTIPSSIFNISSCQNLPVLEGLFI 206 (1049)
Q Consensus 127 ~l~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~l~~l~~L~~L~l 206 (1049)
+|++|++++ +|. +.+ +|++|+|++|.+++ +|. .+++|++|+|++|++++ +|. .+++|++|+|
T Consensus 106 ~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---------~l~~L~~L~L 167 (571)
T 3cvr_A 106 DACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---------LPTSLEVLSV 167 (571)
T ss_dssp ECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---------CCTTCCEEEC
T ss_pred EccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---------cCCCcCEEEC
Confidence 999999987 787 665 89999999999986 777 68899999999999984 776 1356889999
Q ss_pred eccccCCCCCCCcccccccceecccccccccccCCCCcccccc-------ceEEeccccccccCccccccccceEEEeec
Q 039290 207 SYNQLTGPIPTNLWKCRELHVVSLAFNKFQGGIPRDIGNLTSV-------RNLFLGNNSLIGEIPNEIGNLRNLEVLGVQ 279 (1049)
Q Consensus 207 ~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L-------~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~ 279 (1049)
++|++++ +|. +. ++|+.|+|++|+|+ .+|. |.. +| +.|+|++|+|+ .+|..+..+++|+.|+|+
T Consensus 168 s~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~ 238 (571)
T 3cvr_A 168 RNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILE 238 (571)
T ss_dssp CSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECC
T ss_pred CCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEee
Confidence 9999986 777 55 88999999999988 6777 655 67 88999999988 678888888899999999
Q ss_pred cccCCCccccccccccc
Q 039290 280 SSNLAGLIPASIFNIST 296 (1049)
Q Consensus 280 ~n~l~~~~p~~~~~l~~ 296 (1049)
+|++++.+|..+..++.
T Consensus 239 ~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 239 DNPLSSRIRESLSQQTA 255 (571)
T ss_dssp SSSCCHHHHHHHHHHHH
T ss_pred CCcCCCcCHHHHHHhhc
Confidence 99888888887776554
No 336
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=5e-23 Score=219.08 Aligned_cols=196 Identities=22% Similarity=0.254 Sum_probs=104.4
Q ss_pred cccEEEccCCccccCCCCCCCCCCCccEEEccCCc-ccccCCccccCcCCCcceEeec-cccCCCCCcccccccccceEE
Q 039290 423 SMKSLSMESCNISGGIPKELGNINNLTVIRLGNNE-LTGTIPVTLGRLQKLQGLYLQN-NKLEGSIPEDLCHLYRLANLY 500 (1049)
Q Consensus 423 ~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~ 500 (1049)
++++|++++|++++..+..|.++++|++|++++|+ +++..+..|.++++|++|++++ |++++..+..|..+++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 55555555555555444455555555555555554 5544444555555555555555 555544444555555555555
Q ss_pred eeCcccCCcCchhccCcccCC---ceeecCc-ccccccCcccccccccccccccCCccCCCCccCcCCCccee-Eeeccc
Q 039290 501 LGDNKLSGRLPACLGNLTSLR---DLSLGSN-ALTSIIPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVI-EMDLSL 575 (1049)
Q Consensus 501 L~~N~l~~~~p~~~~~l~~L~---~L~L~~N-~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~-~L~Ls~ 575 (1049)
+++|++++ +|. +..+++|+ +|++++| +++++. +..|..+++|+ +|++++
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~------------------------~~~~~~l~~L~~~L~l~~ 165 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIP------------------------VNAFQGLCNETLTLKLYN 165 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEEC------------------------TTTTTTTBSSEEEEECCS
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchhhcC------------------------cccccchhcceeEEEcCC
Confidence 55555553 333 44444444 5555554 444443 44455555555 555555
Q ss_pred ccccccccccccCCCcccEEEeeccc-ccCCccccccCc-cCCcEEeccCccccCCcccccccccccceeeccCC
Q 039290 576 NALSGVIPVTIGGLQGLQLLSLRYNR-LQGPIPESFGGL-KSLNFVDMSNNNLSGTIPKSMEALSYLKHLNLSFN 648 (1049)
Q Consensus 576 N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~N 648 (1049)
|+++...+..|.. ++|+.|+|++|+ +++..+..|.++ ++|++|||++|+++ .+|.. .+++|+.|+++++
T Consensus 166 n~l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~-~l~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 166 NGFTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT-ALPSK--GLEHLKELIARNT 236 (239)
T ss_dssp CCCCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCC-CCCCT--TCTTCSEEECTTC
T ss_pred CCCcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccc-cCChh--HhccCceeeccCc
Confidence 5555332233333 566666666663 665555566666 66666666666666 33332 4555666666554
No 337
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=2.7e-23 Score=230.41 Aligned_cols=201 Identities=19% Similarity=0.193 Sum_probs=133.8
Q ss_pred CCccEEEccCCcccccCCccc--cCcCCCcceEeeccccCCCCC----cccccccccceEEeeCcccCCcCchhccCccc
Q 039290 446 NNLTVIRLGNNELTGTIPVTL--GRLQKLQGLYLQNNKLEGSIP----EDLCHLYRLANLYLGDNKLSGRLPACLGNLTS 519 (1049)
Q Consensus 446 ~~L~~L~Ls~N~l~~~~p~~~--~~l~~L~~L~L~~N~l~~~~~----~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 519 (1049)
++|++|+|++|.+++..|..+ ..+++|++|+|++|++++..+ ..+..+++|++|++++|++++..|..++++++
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 446666666666666666655 666666666666666665443 23345666666677766666666666666677
Q ss_pred CCceeecCcccccc---c-CcccccccccccccccCCccCCCCcc----CcCCCcceeEeecccccccccccccccCC--
Q 039290 520 LRDLSLGSNALTSI---I-PSTLWNLKDILRFNLSSNSLNGSLLP----DIGNLKVVIEMDLSLNALSGVIPVTIGGL-- 589 (1049)
Q Consensus 520 L~~L~L~~N~l~~~---~-p~~~~~l~~L~~L~Ls~N~l~~~~~~----~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-- 589 (1049)
|++|+|++|++.+. . +..+..+++|++|+|++|+++. ++. .+..+++|++|||++|+|++..|..+..+
T Consensus 171 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ 249 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMW 249 (310)
T ss_dssp CCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCC
T ss_pred CCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccC
Confidence 77777777766542 1 2223566677777777777653 222 24566777777777777777767666666
Q ss_pred -CcccEEEeecccccCCccccccCccCCcEEeccCccccCCcccccccccccceeeccCCcccc
Q 039290 590 -QGLQLLSLRYNRLQGPIPESFGGLKSLNFVDMSNNNLSGTIPKSMEALSYLKHLNLSFNQLEG 652 (1049)
Q Consensus 590 -~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~ 652 (1049)
++|+.|+|++|+|+ .+|..+. ++|++|||++|+|++. |. +..+++|+.|++++|+++.
T Consensus 250 ~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 250 SSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred cCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 58888888888888 5566654 6888888888888853 33 6777888888888888764
No 338
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=1.3e-24 Score=246.74 Aligned_cols=111 Identities=19% Similarity=0.179 Sum_probs=66.6
Q ss_pred hhcccCccccccCcccccccCCcEeccccCCccccCc----ccccccC-CccEEEeCCCCccCCCcccccCC-----Ccc
Q 039290 102 LAIRNNSFFGSLPEELSHLRGLKYFDFRFNNFHIEIP----SWFVSLP-RLQHLLLKHNSFVGKIPETIGYL-----SLL 171 (1049)
Q Consensus 102 L~l~~n~~~g~~p~~~~~L~~L~~L~l~~n~~~~~~p----~~~~~l~-~L~~L~L~~n~l~~~~p~~~~~l-----~~L 171 (1049)
+.++.|+++|.+|..+...++|++|||++|++.+..+ ..|.+++ +|++|+|++|.+++..+..+..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 3566677777777666666667777777777665555 5566666 67777777777766656655554 666
Q ss_pred cEEcCCCccCccccCCCcccccccCCC-CccceEEeeccccCCC
Q 039290 172 QELDLSDNQLSGTIPSSIFNISSCQNL-PVLEGLFISYNQLTGP 214 (1049)
Q Consensus 172 ~~L~Ls~N~l~g~ip~~~~~l~~l~~l-~~L~~L~l~~N~l~~~ 214 (1049)
++|||++|++++..+..++.. ++.+ ++|++|+|++|++++.
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~--l~~~~~~L~~L~Ls~N~l~~~ 124 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKT--LAAIPFTITVLDLGWNDFSSK 124 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHH--HHTSCTTCCEEECCSSCGGGS
T ss_pred cEEECcCCcCChHHHHHHHHH--HHhCCCCccEEECcCCcCCcH
Confidence 667776666665444433321 1122 3455555555555543
No 339
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.88 E-value=1.2e-24 Score=247.06 Aligned_cols=251 Identities=19% Similarity=0.204 Sum_probs=168.2
Q ss_pred EEccCCccccCCCCccccccccccEEEccCCccccCCC----CCCCCCC-CccEEEccCCcccccCCccccCc-----CC
Q 039290 402 IYLSENPINGILPSSIGNFSISMKSLSMESCNISGGIP----KELGNIN-NLTVIRLGNNELTGTIPVTLGRL-----QK 471 (1049)
Q Consensus 402 L~Ls~N~i~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p----~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l-----~~ 471 (1049)
+++++|.+++.+|..+.. ..+|++|+|++|.+++..+ ..+..++ +|++|+|++|.+++..+..+..+ ++
T Consensus 3 ~~ls~n~~~~~~~~~~~~-~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSI-PHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EECCCCTTCCHHHHHHTS-CTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred cccccccchHHHHHHHhC-CCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 345555555544433322 2246666666666665554 5566666 77777887777776666666664 77
Q ss_pred CcceEeeccccCCCCCcccccc-----cccceEEeeCcccCCcCchhccC-----cccCCceeecCcccccccC----cc
Q 039290 472 LQGLYLQNNKLEGSIPEDLCHL-----YRLANLYLGDNKLSGRLPACLGN-----LTSLRDLSLGSNALTSIIP----ST 537 (1049)
Q Consensus 472 L~~L~L~~N~l~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~-----l~~L~~L~L~~N~l~~~~p----~~ 537 (1049)
|++|+|++|++++..+..++.. ++|++|++++|++++..+..+.. .++|++|+|++|++++..+ ..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 8888888888776666554443 67888888888877665554433 2578888888888875333 33
Q ss_pred ccccc-ccccccccCCccCCCCccCcC----CC-cceeEeeccccccccc----ccccccC-CCcccEEEeecccccCCc
Q 039290 538 LWNLK-DILRFNLSSNSLNGSLLPDIG----NL-KVVIEMDLSLNALSGV----IPVTIGG-LQGLQLLSLRYNRLQGPI 606 (1049)
Q Consensus 538 ~~~l~-~L~~L~Ls~N~l~~~~~~~~~----~l-~~L~~L~Ls~N~l~~~----~p~~~~~-l~~L~~L~Ls~N~l~~~~ 606 (1049)
+...+ +|++|+|++|++++..+..+. .+ ++|++|||++|.|++. ++..+.. .++|+.|+|++|+|++..
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 241 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPS 241 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCC
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHH
Confidence 34444 788888888888766554433 33 5888888888888863 4455555 358888999988888755
Q ss_pred c----ccccCccCCcEEeccCccccCC-------cccccccccccceeeccCCccccc
Q 039290 607 P----ESFGGLKSLNFVDMSNNNLSGT-------IPKSMEALSYLKHLNLSFNQLEGE 653 (1049)
Q Consensus 607 ~----~~~~~l~~L~~L~Ls~N~l~~~-------~p~~~~~l~~L~~l~l~~N~l~~~ 653 (1049)
+ ..+..+++|++|+|++|++++. ++..+..+++|+.||+++|++...
T Consensus 242 ~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 242 LENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp HHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred HHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 4 4456778889999998885533 334566778888899999988765
No 340
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=1.3e-22 Score=217.44 Aligned_cols=180 Identities=23% Similarity=0.253 Sum_probs=102.4
Q ss_pred CccEEEccCCcccccCCccccCcCCCcceEeeccccCCCCCcccccccccceEEeeCcccCCcCchhccCcccCCceeec
Q 039290 447 NLTVIRLGNNELTGTIPVTLGRLQKLQGLYLQNNKLEGSIPEDLCHLYRLANLYLGDNKLSGRLPACLGNLTSLRDLSLG 526 (1049)
Q Consensus 447 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 526 (1049)
+.++++++++.++ .+|..+. ++|+.|+|++|++++..+..|..+++|++|+|++|.+++..|..|.++++|++|+|+
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 4556666666666 4454443 456666666666665555555555666666666666555555555555555555555
Q ss_pred CcccccccCcccccccccccccccCCccCCCCccCcCCCcceeEeecccccccccccccccCCCcccEEEeecccccCCc
Q 039290 527 SNALTSIIPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALSGVIPVTIGGLQGLQLLSLRYNRLQGPI 606 (1049)
Q Consensus 527 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 606 (1049)
+|+++++.+..|..+ ++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..
T Consensus 92 ~n~l~~~~~~~~~~l------------------------~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 147 (251)
T 3m19_A 92 NNQLASLPLGVFDHL------------------------TQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIP 147 (251)
T ss_dssp TSCCCCCCTTTTTTC------------------------TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CCcccccChhHhccc------------------------CCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccC
Confidence 555555444444444 44555555555555444444555555666666666655555
Q ss_pred cccccCccCCcEEeccCccccCCcccccccccccceeeccCCccccc
Q 039290 607 PESFGGLKSLNFVDMSNNNLSGTIPKSMEALSYLKHLNLSFNQLEGE 653 (1049)
Q Consensus 607 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~ 653 (1049)
+..|+++++|++|+|++|++++..+..+..+++|+.|++++|+|+|.
T Consensus 148 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 148 AGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred HHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 55555566666666666666554444555566666666666666555
No 341
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.88 E-value=3.1e-23 Score=229.92 Aligned_cols=201 Identities=21% Similarity=0.257 Sum_probs=163.7
Q ss_pred cccEEEccCCccccCCCCCC--CCCCCccEEEccCCcccccCC----ccccCcCCCcceEeeccccCCCCCccccccccc
Q 039290 423 SMKSLSMESCNISGGIPKEL--GNINNLTVIRLGNNELTGTIP----VTLGRLQKLQGLYLQNNKLEGSIPEDLCHLYRL 496 (1049)
Q Consensus 423 ~L~~L~L~~n~i~~~~p~~~--~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 496 (1049)
+|++|++++|.+.+..|..+ ..+++|++|+|++|.+++..+ ..+..+++|++|+|++|++.+..+..+..+++|
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 171 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPAL 171 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTC
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCC
Confidence 47777777777777777777 788889999999998887555 345578899999999999988888888899999
Q ss_pred ceEEeeCcccCCc--C--chhccCcccCCceeecCcccccccC--c-ccccccccccccccCCccCCCCccCcCCC---c
Q 039290 497 ANLYLGDNKLSGR--L--PACLGNLTSLRDLSLGSNALTSIIP--S-TLWNLKDILRFNLSSNSLNGSLLPDIGNL---K 566 (1049)
Q Consensus 497 ~~L~L~~N~l~~~--~--p~~~~~l~~L~~L~L~~N~l~~~~p--~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l---~ 566 (1049)
++|+|++|++.+. + +..++.+++|++|+|++|+++...+ . .+..+++|++|+|++|++++..|+.+..+ +
T Consensus 172 ~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~ 251 (310)
T 4glp_A 172 TSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSS 251 (310)
T ss_dssp CEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCT
T ss_pred CEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcC
Confidence 9999999987642 2 2334788999999999999975322 1 35678999999999999998878777776 6
Q ss_pred ceeEeecccccccccccccccCCCcccEEEeecccccCCccccccCccCCcEEeccCccccC
Q 039290 567 VVIEMDLSLNALSGVIPVTIGGLQGLQLLSLRYNRLQGPIPESFGGLKSLNFVDMSNNNLSG 628 (1049)
Q Consensus 567 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 628 (1049)
+|++|+|++|+|+ .+|..+. ++|+.|+|++|+|++. |. +..+++|++|+|++|+++.
T Consensus 252 ~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 252 ALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp TCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred cCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 9999999999999 5677765 7999999999999964 43 6888999999999999974
No 342
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.88 E-value=1.7e-22 Score=214.84 Aligned_cols=197 Identities=21% Similarity=0.227 Sum_probs=157.0
Q ss_pred CCCcEEEccCCccccCCCCccccccccccEEEccCCc-cccCCCCCCCCCCCccEEEccC-CcccccCCccccCcCCCcc
Q 039290 397 RNLEIIYLSENPINGILPSSIGNFSISMKSLSMESCN-ISGGIPKELGNINNLTVIRLGN-NELTGTIPVTLGRLQKLQG 474 (1049)
Q Consensus 397 ~~L~~L~Ls~N~i~~~~p~~~~~~~~~L~~L~L~~n~-i~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~ 474 (1049)
++|++|++++|+++++.+..+..+. +|++|++++|+ +++..+..|.++++|++|+|++ |++++..+..|.++++|++
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~-~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~ 109 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLP-NISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKF 109 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCT-TCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCE
T ss_pred CcccEEEEeCCcceEECHHHccCCC-CCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCE
Confidence 4899999999999988887887775 99999999997 8877778999999999999999 9999888889999999999
Q ss_pred eEeeccccCCCCCcccccccccc---eEEeeCc-ccCCcCchhccCcccCC-ceeecCcccccccCcccccccccccccc
Q 039290 475 LYLQNNKLEGSIPEDLCHLYRLA---NLYLGDN-KLSGRLPACLGNLTSLR-DLSLGSNALTSIIPSTLWNLKDILRFNL 549 (1049)
Q Consensus 475 L~L~~N~l~~~~~~~~~~l~~L~---~L~L~~N-~l~~~~p~~~~~l~~L~-~L~L~~N~l~~~~p~~~~~l~~L~~L~L 549 (1049)
|++++|++++ +|. +..+++|+ +|++++| .+++..+..|.++++|+ +|++++|+++.+.+..+.. +
T Consensus 110 L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~------- 179 (239)
T 2xwt_C 110 LGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-T------- 179 (239)
T ss_dssp EEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-C-------
T ss_pred EeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-C-------
Confidence 9999999996 666 88888888 9999999 99977777899999999 9999999998543333322 4
Q ss_pred cCCccCCCCccCcCCCcceeEeeccccc-ccccccccccCC-CcccEEEeecccccCCccccccCccCCcEEeccCc
Q 039290 550 SSNSLNGSLLPDIGNLKVVIEMDLSLNA-LSGVIPVTIGGL-QGLQLLSLRYNRLQGPIPESFGGLKSLNFVDMSNN 624 (1049)
Q Consensus 550 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 624 (1049)
+|++|++++|+ +++..+..|.++ ++|+.|++++|+|++..+. .+++|+.|+++++
T Consensus 180 -----------------~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 180 -----------------KLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp -----------------EEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred -----------------CCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 45555555553 554555566666 6777777777777643333 4566777777665
No 343
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=3.7e-25 Score=253.74 Aligned_cols=243 Identities=19% Similarity=0.206 Sum_probs=113.3
Q ss_pred ccCcccccccCCcEeccccCCccccCc----ccccccCCccEEEeCCC---CccCCCcccc-------cCCCcccEEcCC
Q 039290 112 SLPEELSHLRGLKYFDFRFNNFHIEIP----SWFVSLPRLQHLLLKHN---SFVGKIPETI-------GYLSLLQELDLS 177 (1049)
Q Consensus 112 ~~p~~~~~L~~L~~L~l~~n~~~~~~p----~~~~~l~~L~~L~L~~n---~l~~~~p~~~-------~~l~~L~~L~Ls 177 (1049)
.++..+.++++|++|+|++|++....+ ..+..+++|++|+|++| ++++.+|..+ ..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 344455555555555555555554322 22445555555555553 3334444433 455555555555
Q ss_pred CccCcc----ccCCCcccccccCCCCccceEEeeccccCCCCCCCc----ccc---------cccceecccccccc-ccc
Q 039290 178 DNQLSG----TIPSSIFNISSCQNLPVLEGLFISYNQLTGPIPTNL----WKC---------RELHVVSLAFNKFQ-GGI 239 (1049)
Q Consensus 178 ~N~l~g----~ip~~~~~l~~l~~l~~L~~L~l~~N~l~~~~p~~l----~~l---------~~L~~L~L~~N~l~-~~~ 239 (1049)
+|++++ .+|..+. .+++|++|+|++|++++..+..+ ..+ ++|+.|+|++|+++ +.+
T Consensus 103 ~n~l~~~~~~~l~~~l~------~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~ 176 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLS------KHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSM 176 (386)
T ss_dssp SCCCCTTTHHHHHHHHH------HCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGH
T ss_pred CCcCCHHHHHHHHHHHH------hCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHH
Confidence 555553 2333332 22334555555555442222222 122 44445555555444 223
Q ss_pred C---CCCccccccceEEecccccc--c---cCccccccccceEEEeeccccCC----CccccccccccccceEEeccCcc
Q 039290 240 P---RDIGNLTSVRNLFLGNNSLI--G---EIPNEIGNLRNLEVLGVQSSNLA----GLIPASIFNISTLKELAVTDNDL 307 (1049)
Q Consensus 240 p---~~~~~l~~L~~L~L~~N~l~--~---~~p~~l~~l~~L~~L~L~~n~l~----~~~p~~~~~l~~L~~L~l~~N~l 307 (1049)
| ..+..+++|++|+|++|+++ | ..|..+..+++|+.|+|++|.++ +.+|..+..+++|++|+|++|.+
T Consensus 177 ~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i 256 (386)
T 2ca6_A 177 KEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLL 256 (386)
T ss_dssp HHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCC
T ss_pred HHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCC
Confidence 3 23444455555555555554 1 22334555555555555555553 33444455555555555555554
Q ss_pred CCC----CCCccc-CCCCCccEEEcCCCCCCC----CCCccc-cCCCCCceeecccCccccCc
Q 039290 308 LGS----LPSSID-LGLPNLERLFLGENNFSG----TIPSSL-TNISELSVLDFGFNSFSGLI 360 (1049)
Q Consensus 308 ~~~----~p~~~~-~~l~~L~~L~L~~N~l~~----~~p~~~-~~l~~L~~L~Ls~N~l~~~~ 360 (1049)
.+. +|..+. ..+++|++|+|++|.+++ .+|..+ .++++|++|++++|.+++..
T Consensus 257 ~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 257 SARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp CHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred chhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 432 222211 124555555555555554 244444 44555666666666555443
No 344
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=3.4e-25 Score=254.02 Aligned_cols=248 Identities=22% Similarity=0.278 Sum_probs=205.3
Q ss_pred ccCCCCCCcchhhhhhcccCccccc----cCcccccccCCcEeccccC---CccccCcccc-------cccCCccEEEeC
Q 039290 88 TIPPQLGNLSFLAVLAIRNNSFFGS----LPEELSHLRGLKYFDFRFN---NFHIEIPSWF-------VSLPRLQHLLLK 153 (1049)
Q Consensus 88 ~~~~~~~~l~~L~~L~l~~n~~~g~----~p~~~~~L~~L~~L~l~~n---~~~~~~p~~~-------~~l~~L~~L~L~ 153 (1049)
.++..+..++.|++|+|++|.+.+. ++..+.++++|++|+|++| ++.+.+|..+ ..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 4666677788899999999999876 4445778999999999984 6667788766 688999999999
Q ss_pred CCCccC----CCcccccCCCcccEEcCCCccCccccCCCcccccccCCC---------CccceEEeeccccC-CCCC---
Q 039290 154 HNSFVG----KIPETIGYLSLLQELDLSDNQLSGTIPSSIFNISSCQNL---------PVLEGLFISYNQLT-GPIP--- 216 (1049)
Q Consensus 154 ~n~l~~----~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~l~~l---------~~L~~L~l~~N~l~-~~~p--- 216 (1049)
+|.+++ .+|..+..+++|++|+|++|++++..+..+... +..+ ++|++|+|++|+++ +.+|
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~--l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~ 180 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARA--LQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWA 180 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHH--HHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHH
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHH--HHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHH
Confidence 999987 488899999999999999999975444444321 2223 67999999999998 4555
Q ss_pred CCcccccccceecccccccc--c---ccCCCCccccccceEEecccccc----ccCccccccccceEEEeeccccCCCc-
Q 039290 217 TNLWKCRELHVVSLAFNKFQ--G---GIPRDIGNLTSVRNLFLGNNSLI----GEIPNEIGNLRNLEVLGVQSSNLAGL- 286 (1049)
Q Consensus 217 ~~l~~l~~L~~L~L~~N~l~--~---~~p~~~~~l~~L~~L~L~~N~l~----~~~p~~l~~l~~L~~L~L~~n~l~~~- 286 (1049)
..+..+++|+.|+|++|+++ | .+|..+..+++|++|+|++|.++ +.+|..+..+++|+.|+|++|.+++.
T Consensus 181 ~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~ 260 (386)
T 2ca6_A 181 KTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARG 260 (386)
T ss_dssp HHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHH
T ss_pred HHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhh
Confidence 46778899999999999998 3 45668899999999999999996 67899999999999999999999876
Q ss_pred ---cccccc--cccccceEEeccCccCC----CCCCcccCCCCCccEEEcCCCCCCCCCC
Q 039290 287 ---IPASIF--NISTLKELAVTDNDLLG----SLPSSIDLGLPNLERLFLGENNFSGTIP 337 (1049)
Q Consensus 287 ---~p~~~~--~l~~L~~L~l~~N~l~~----~~p~~~~~~l~~L~~L~L~~N~l~~~~p 337 (1049)
+|..+. .+++|++|+|++|.+.+ .+|..+...+++|++|+|++|.+++..+
T Consensus 261 ~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 261 AAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp HHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred HHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 566664 48999999999999987 4888776578999999999999997664
No 345
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.87 E-value=9.1e-24 Score=237.46 Aligned_cols=249 Identities=17% Similarity=0.141 Sum_probs=193.7
Q ss_pred CcEeccccCCccccCccccccc--CCccEEEeCCCCccCCCcccccCCCcccEEcCCCccCccc-cCCCcccccccCCCC
Q 039290 123 LKYFDFRFNNFHIEIPSWFVSL--PRLQHLLLKHNSFVGKIPETIGYLSLLQELDLSDNQLSGT-IPSSIFNISSCQNLP 199 (1049)
Q Consensus 123 L~~L~l~~n~~~~~~p~~~~~l--~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~-ip~~~~~l~~l~~l~ 199 (1049)
++.+|+++|++. |..+..+ +++++|++++|.+.+.+|. +..+++|++|+|++|++++. +|..+. .++
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~------~~~ 118 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILS------QCS 118 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHT------TBC
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHh------hCC
Confidence 667777777665 5566666 7788888888887765554 55678888888888877754 555443 355
Q ss_pred ccceEEeeccccCCCCCCCcccccccceeccccc-cccc-ccCCCCccccccceEEeccc-ccccc-Ccccccccc-ceE
Q 039290 200 VLEGLFISYNQLTGPIPTNLWKCRELHVVSLAFN-KFQG-GIPRDIGNLTSVRNLFLGNN-SLIGE-IPNEIGNLR-NLE 274 (1049)
Q Consensus 200 ~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N-~l~~-~~p~~~~~l~~L~~L~L~~N-~l~~~-~p~~l~~l~-~L~ 274 (1049)
+|++|++++|++++.+|..+..+++|++|+|++| .+++ .+|..+.++++|++|+|++| .+++. ++..++.++ +|+
T Consensus 119 ~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~ 198 (336)
T 2ast_B 119 KLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETIT 198 (336)
T ss_dssp CCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCC
T ss_pred CCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCC
Confidence 6788888888877777777778888888888888 6775 36777889999999999999 99864 688899999 999
Q ss_pred EEeeccc--cCC-CccccccccccccceEEeccCc-cCCCCCCcccCCCCCccEEEcCCCC-CCCCCCccccCCCCCcee
Q 039290 275 VLGVQSS--NLA-GLIPASIFNISTLKELAVTDND-LLGSLPSSIDLGLPNLERLFLGENN-FSGTIPSSLTNISELSVL 349 (1049)
Q Consensus 275 ~L~L~~n--~l~-~~~p~~~~~l~~L~~L~l~~N~-l~~~~p~~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L 349 (1049)
+|++++| .++ +.+|..+.++++|++|++++|. +++..+..+. .+++|++|++++|. +.......++++++|+.|
T Consensus 199 ~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~-~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L 277 (336)
T 2ast_B 199 QLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFF-QLNYLQHLSLSRCYDIIPETLLELGEIPTLKTL 277 (336)
T ss_dssp EEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGG-GCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEE
T ss_pred EEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHh-CCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEE
Confidence 9999999 566 5678888899999999999999 6656666554 68999999999996 332222368889999999
Q ss_pred ecccCccccCccccccccc-ccceeecccccccCCCCC
Q 039290 350 DFGFNSFSGLIPTTFGNLR-SLKLLSLAGNVLTSPTPD 386 (1049)
Q Consensus 350 ~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~~~ 386 (1049)
++++| +. ...+..+. +|+.|++++|.+++..+.
T Consensus 278 ~l~~~-i~---~~~~~~l~~~l~~L~l~~n~l~~~~~~ 311 (336)
T 2ast_B 278 QVFGI-VP---DGTLQLLKEALPHLQINCSHFTTIARP 311 (336)
T ss_dssp ECTTS-SC---TTCHHHHHHHSTTSEESCCCSCCTTCS
T ss_pred eccCc-cC---HHHHHHHHhhCcceEEecccCccccCC
Confidence 99999 43 33455563 588999999999987665
No 346
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.87 E-value=4.7e-22 Score=219.80 Aligned_cols=190 Identities=25% Similarity=0.379 Sum_probs=95.6
Q ss_pred cccEEEccCCccccCCCCCCCCCCCccEEEccCCcccccCCccccCcCCCcceEeeccccCCCCCcccccccccceEEee
Q 039290 423 SMKSLSMESCNISGGIPKELGNINNLTVIRLGNNELTGTIPVTLGRLQKLQGLYLQNNKLEGSIPEDLCHLYRLANLYLG 502 (1049)
Q Consensus 423 ~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 502 (1049)
+|++|++++|.+.. +| .+..+++|++|+|++|.+++..+ +..+++|++|+|++|++++ + +.+..+++|++|+++
T Consensus 42 ~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~-~~~~~l~~L~~L~l~ 115 (308)
T 1h6u_A 42 GITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-V-SAIAGLQSIKTLDLT 115 (308)
T ss_dssp TCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-C-GGGTTCTTCCEEECT
T ss_pred CcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-c-hhhcCCCCCCEEECC
Confidence 45555555555543 22 34455555555555555553222 5555555555555555543 1 234445555555555
Q ss_pred CcccCCcCchhccCcccCCceeecCcccccccCcccccccccccccccCCccCCCCccCcCCCcceeEeecccccccccc
Q 039290 503 DNKLSGRLPACLGNLTSLRDLSLGSNALTSIIPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALSGVI 582 (1049)
Q Consensus 503 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 582 (1049)
+|++++ ++. +..+++|++|++++|++++..+ +..+++|++|++++|++++..
T Consensus 116 ~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--------------------------l~~l~~L~~L~l~~n~l~~~~ 167 (308)
T 1h6u_A 116 STQITD-VTP-LAGLSNLQVLYLDLNQITNISP--------------------------LAGLTNLQYLSIGNAQVSDLT 167 (308)
T ss_dssp TSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--------------------------GGGCTTCCEEECCSSCCCCCG
T ss_pred CCCCCC-chh-hcCCCCCCEEECCCCccCcCcc--------------------------ccCCCCccEEEccCCcCCCCh
Confidence 555543 221 4444455555555554444322 444555555555555555432
Q ss_pred cccccCCCcccEEEeecccccCCccccccCccCCcEEeccCccccCCcccccccccccceeeccCCcccc
Q 039290 583 PVTIGGLQGLQLLSLRYNRLQGPIPESFGGLKSLNFVDMSNNNLSGTIPKSMEALSYLKHLNLSFNQLEG 652 (1049)
Q Consensus 583 p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~ 652 (1049)
+ +..+++|+.|+|++|++++..+ +..+++|++|+|++|++++..| +..+++|+.|++++|++++
T Consensus 168 ~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 168 P--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp G--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred h--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 2 5555555555555555554333 5555556666666665553332 5555556666666665544
No 347
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.87 E-value=1e-21 Score=221.64 Aligned_cols=201 Identities=18% Similarity=0.141 Sum_probs=110.7
Q ss_pred EeccccCCccccCcccccccCCccEEEeCCCCccCCCcccccCCCcccEEcCCCccCccccCCCcccccccCCCCccc-e
Q 039290 125 YFDFRFNNFHIEIPSWFVSLPRLQHLLLKHNSFVGKIPETIGYLSLLQELDLSDNQLSGTIPSSIFNISSCQNLPVLE-G 203 (1049)
Q Consensus 125 ~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~l~~l~~L~-~ 203 (1049)
.++.++++++ .||..+ .+++++|+|++|+|+...+..|+++++|++|||++|++.+.+|...+ .+++++. .
T Consensus 13 ~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f-----~~L~~l~~~ 84 (350)
T 4ay9_X 13 VFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVF-----SNLPKLHEI 84 (350)
T ss_dssp EEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSB-----CSCTTCCEE
T ss_pred EEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHh-----hcchhhhhh
Confidence 4455555555 455544 24566666666666633334566666666666666666555655432 2233333 3
Q ss_pred EEeeccccCCCCCCCcccccccceecccccccccccCCCCccccccceEEecc-ccccccCcccccccc-ceEEEeeccc
Q 039290 204 LFISYNQLTGPIPTNLWKCRELHVVSLAFNKFQGGIPRDIGNLTSVRNLFLGN-NSLIGEIPNEIGNLR-NLEVLGVQSS 281 (1049)
Q Consensus 204 L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~l~~l~-~L~~L~L~~n 281 (1049)
+.++.|++++..|..+..+++|++|++++|++++..+..+....++..|++.+ |++....+..|..+. .++.|+|++|
T Consensus 85 l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N 164 (350)
T 4ay9_X 85 RIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKN 164 (350)
T ss_dssp EEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSS
T ss_pred hcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccc
Confidence 55556666655555566666666666666666655454555555666666644 345544444455543 4666666666
Q ss_pred cCCCccccccccccccceEEeccCccCCCCCCcccCCCCCccEEEcCCCCCCC
Q 039290 282 NLAGLIPASIFNISTLKELAVTDNDLLGSLPSSIDLGLPNLERLFLGENNFSG 334 (1049)
Q Consensus 282 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~ 334 (1049)
+++.+ |...+...+|++|++++|+..+.+|...+.++++|++|+|++|+|+.
T Consensus 165 ~i~~i-~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~ 216 (350)
T 4ay9_X 165 GIQEI-HNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHS 216 (350)
T ss_dssp CCCEE-CTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCC
T ss_pred cccCC-ChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCc
Confidence 66543 33334445566666655444445555555555556666666665553
No 348
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.87 E-value=3e-22 Score=221.43 Aligned_cols=211 Identities=25% Similarity=0.378 Sum_probs=140.9
Q ss_pred CCceeecccCccccCcccccccccccceeecccccccCCCCCcccccccccCCCCcEEEccCCccccCCCCccccccccc
Q 039290 345 ELSVLDFGFNSFSGLIPTTFGNLRSLKLLSLAGNVLTSPTPDLSFLSSLTSCRNLEIIYLSENPINGILPSSIGNFSISM 424 (1049)
Q Consensus 345 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~~~~~L 424 (1049)
++..+.+..+.+.+.+ .+..+++|++|++++|.++.++ .+..+++|++|++++|.++
T Consensus 20 ~~~~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~l~-------~~~~l~~L~~L~L~~n~i~-------------- 76 (308)
T 1h6u_A 20 NAIKIAAGKSNVTDTV--TQADLDGITTLSAFGTGVTTIE-------GVQYLNNLIGLELKDNQIT-------------- 76 (308)
T ss_dssp HHHHHHTTCSSTTSEE--CHHHHHTCCEEECTTSCCCCCT-------TGGGCTTCCEEECCSSCCC--------------
T ss_pred HHHHHHhCCCCcCcee--cHHHcCCcCEEEeeCCCccCch-------hhhccCCCCEEEccCCcCC--------------
Confidence 3444555666655432 2455667777777777666543 1444555555555555544
Q ss_pred cEEEccCCccccCCCCCCCCCCCccEEEccCCcccccCCccccCcCCCcceEeeccccCCCCCcccccccccceEEeeCc
Q 039290 425 KSLSMESCNISGGIPKELGNINNLTVIRLGNNELTGTIPVTLGRLQKLQGLYLQNNKLEGSIPEDLCHLYRLANLYLGDN 504 (1049)
Q Consensus 425 ~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 504 (1049)
+..+ +..+++|++|+|++|.+++. ..+..+++|++|+|++|++++ ++ .+..+++|++|++++|
T Consensus 77 -----------~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~l~~n 139 (308)
T 1h6u_A 77 -----------DLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKTLDLTSTQITD-VT-PLAGLSNLQVLYLDLN 139 (308)
T ss_dssp -----------CCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCEEECTTSCCCC-CG-GGTTCTTCCEEECCSS
T ss_pred -----------CChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCCEEECCCCCCCC-ch-hhcCCCCCCEEECCCC
Confidence 3333 78899999999999999964 479999999999999999986 44 3899999999999999
Q ss_pred ccCCcCchhccCcccCCceeecCcccccccCcccccccccccccccCCccCCCCccCcCCCcceeEeecccccccccccc
Q 039290 505 KLSGRLPACLGNLTSLRDLSLGSNALTSIIPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALSGVIPV 584 (1049)
Q Consensus 505 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 584 (1049)
.+++..+ ++.+++|+.|++++|++++..+ +..+++|+.|++++|++++..+ +..+++|++|+|++|++++..+
T Consensus 140 ~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~- 212 (308)
T 1h6u_A 140 QITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP- 212 (308)
T ss_dssp CCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG-
T ss_pred ccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc-
Confidence 9996543 8899999999999999987544 6666777777776666664322 4444444444444444443321
Q ss_pred cccCCCcccEEEeeccccc
Q 039290 585 TIGGLQGLQLLSLRYNRLQ 603 (1049)
Q Consensus 585 ~~~~l~~L~~L~Ls~N~l~ 603 (1049)
+..+++|+.|+|++|+++
T Consensus 213 -l~~l~~L~~L~l~~N~i~ 230 (308)
T 1h6u_A 213 -LANTSNLFIVTLTNQTIT 230 (308)
T ss_dssp -GTTCTTCCEEEEEEEEEE
T ss_pred -ccCCCCCCEEEccCCeee
Confidence 344444444444444443
No 349
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.86 E-value=4.6e-22 Score=235.62 Aligned_cols=192 Identities=24% Similarity=0.338 Sum_probs=112.1
Q ss_pred CCcEeccccCCccccCcccccccCCccEEEeCCCCccCCCcccccCCCcccEEcCCCccCccccCCCcccccccCCCCcc
Q 039290 122 GLKYFDFRFNNFHIEIPSWFVSLPRLQHLLLKHNSFVGKIPETIGYLSLLQELDLSDNQLSGTIPSSIFNISSCQNLPVL 201 (1049)
Q Consensus 122 ~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~l~~l~~L 201 (1049)
+|++|+|++|++++ +|..+. ++|++|+|++|.++ .+| +.+++|++|+|++|+|++ ||. +.+ +|
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--------~L 122 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--------SL 122 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--------TC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--------CC
Confidence 56666666666654 555442 55666666666665 455 335566666666666653 554 321 35
Q ss_pred ceEEeeccccCCCCCCCcccccccceecccccccccccCCCCccccccceEEeccccccccCccccccccceEEEeeccc
Q 039290 202 EGLFISYNQLTGPIPTNLWKCRELHVVSLAFNKFQGGIPRDIGNLTSVRNLFLGNNSLIGEIPNEIGNLRNLEVLGVQSS 281 (1049)
Q Consensus 202 ~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n 281 (1049)
++|+|++|++++ +|. .++ +|+.|+|++|++++ +|. .+++|+.|+|++|
T Consensus 123 ~~L~Ls~N~l~~-lp~---~l~------------------------~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N 170 (571)
T 3cvr_A 123 KHLDVDNNQLTM-LPE---LPA------------------------LLEYINADNNQLTM-LPE---LPTSLEVLSVRNN 170 (571)
T ss_dssp CEEECCSSCCSC-CCC---CCT------------------------TCCEEECCSSCCSC-CCC---CCTTCCEEECCSS
T ss_pred CEEECCCCcCCC-CCC---cCc------------------------cccEEeCCCCccCc-CCC---cCCCcCEEECCCC
Confidence 555555555554 443 344 44455555555443 333 3444555555555
Q ss_pred cCCCccccccccccccceEEeccCccCCCCCCcccC----CCCCccEEEcCCCCCCCCCCccccCCCCCceeecccCccc
Q 039290 282 NLAGLIPASIFNISTLKELAVTDNDLLGSLPSSIDL----GLPNLERLFLGENNFSGTIPSSLTNISELSVLDFGFNSFS 357 (1049)
Q Consensus 282 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~----~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 357 (1049)
++++ +|. +. ++|+.|+|++|+++ .+|. +.. ..+.|+.|+|++|+|+ .+|..+..+++|+.|+|++|.++
T Consensus 171 ~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~ 243 (571)
T 3cvr_A 171 QLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPVRNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLS 243 (571)
T ss_dssp CCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC--------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCC
T ss_pred CCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHHhhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCC
Confidence 5544 333 33 55555555555555 4554 321 1123388999999988 57888888999999999999998
Q ss_pred cCcccccccccc
Q 039290 358 GLIPTTFGNLRS 369 (1049)
Q Consensus 358 ~~~p~~~~~l~~ 369 (1049)
+.+|..++.+.+
T Consensus 244 ~~~p~~l~~l~~ 255 (571)
T 3cvr_A 244 SRIRESLSQQTA 255 (571)
T ss_dssp HHHHHHHHHHHH
T ss_pred CcCHHHHHHhhc
Confidence 888888777654
No 350
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.86 E-value=1.4e-21 Score=202.94 Aligned_cols=185 Identities=23% Similarity=0.242 Sum_probs=119.6
Q ss_pred CceeeeEEEcCCCCcEEEEEEeccccccccCCCCCCcchhhhhhcccCccccccCcccccccCCcEeccccCCccccCcc
Q 039290 60 VCSWIGVTCGVRNRRVTALNISYLGLTGTIPPQLGNLSFLAVLAIRNNSFFGSLPEELSHLRGLKYFDFRFNNFHIEIPS 139 (1049)
Q Consensus 60 ~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~l~~n~~~g~~p~~~~~L~~L~~L~l~~n~~~~~~p~ 139 (1049)
.|.|.+|.|+.. +++ .+|..+ .+.|++|++++|++++..+..++++++|++|++++|++.+..+.
T Consensus 6 ~C~~~~v~c~~~------------~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 70 (208)
T 2o6s_A 6 SCSGTTVECYSQ------------GRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNG 70 (208)
T ss_dssp EEETTEEECCSS------------CCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTT
T ss_pred EECCCEEEecCC------------Ccc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChh
Confidence 489999999643 222 455443 24677777777777754445567777777777777777755555
Q ss_pred cccccCCccEEEeCCCCccCCCcccccCCCcccEEcCCCccCccccCCCcccccccCCCCccceEEeeccccCCCCCCCc
Q 039290 140 WFVSLPRLQHLLLKHNSFVGKIPETIGYLSLLQELDLSDNQLSGTIPSSIFNISSCQNLPVLEGLFISYNQLTGPIPTNL 219 (1049)
Q Consensus 140 ~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~l~~l~~L~~L~l~~N~l~~~~p~~l 219 (1049)
.|..+++|++|+|++|.+++..+..++.+++|++|+|++|++++ +|... +..+++|++|++++|++++..+..+
T Consensus 71 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~-----~~~l~~L~~L~l~~N~l~~~~~~~~ 144 (208)
T 2o6s_A 71 VFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQS-LPDGV-----FDKLTQLKDLRLYQNQLKSVPDGVF 144 (208)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTT-----TTTCTTCCEEECCSSCCSCCCTTTT
T ss_pred hcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcc-cCHhH-----hccCCcCCEEECCCCccceeCHHHh
Confidence 66777777777777777775555556777777777777777773 33332 1234557777777777775544456
Q ss_pred ccccccceecccccccccccCCCCccccccceEEeccccccccCccccccccc
Q 039290 220 WKCRELHVVSLAFNKFQGGIPRDIGNLTSVRNLFLGNNSLIGEIPNEIGNLRN 272 (1049)
Q Consensus 220 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 272 (1049)
..+++|+.|++++|.+.+ .+++|+.|+++.|+++|.+|++++.++.
T Consensus 145 ~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 145 DRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp TTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred ccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 666666666666666553 2345666666666666666666665544
No 351
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.86 E-value=1.8e-21 Score=219.63 Aligned_cols=223 Identities=17% Similarity=0.140 Sum_probs=104.6
Q ss_pred eEEEeeccccCCCccccccccccccceEEeccCccCCCCCCcccCCCCCccE-EEcCCCCCCCCCCccccCCCCCceeec
Q 039290 273 LEVLGVQSSNLAGLIPASIFNISTLKELAVTDNDLLGSLPSSIDLGLPNLER-LFLGENNFSGTIPSSLTNISELSVLDF 351 (1049)
Q Consensus 273 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~-L~L~~N~l~~~~p~~~~~l~~L~~L~L 351 (1049)
+++|+|++|+++.+.+.+|.++++|++|+|++|++.+.+|...+.+++++.+ +.++.|+++...|..|..+++|++|++
T Consensus 32 l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l 111 (350)
T 4ay9_X 32 AIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLI 111 (350)
T ss_dssp CSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEE
T ss_pred CCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccccc
Confidence 3344444444333323334444444444444444433444444444444432 444455555555555666666666666
Q ss_pred ccCccccCcccccccccccceeeccc-ccccCCCCCcccccccccCCCCcEEEccCCccccCCCCccccccccccEEEcc
Q 039290 352 GFNSFSGLIPTTFGNLRSLKLLSLAG-NVLTSPTPDLSFLSSLTSCRNLEIIYLSENPINGILPSSIGNFSISMKSLSME 430 (1049)
Q Consensus 352 s~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~~~~~L~~L~L~ 430 (1049)
++|++.+..+..+....++..|++.+ |.++.++. ..+......++.|+|+
T Consensus 112 ~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~-----------------------------~~f~~~~~~l~~L~L~ 162 (350)
T 4ay9_X 112 SNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIER-----------------------------NSFVGLSFESVILWLN 162 (350)
T ss_dssp EEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECT-----------------------------TSSTTSBSSCEEEECC
T ss_pred cccccccCCchhhcccchhhhhhhccccccccccc-----------------------------cchhhcchhhhhhccc
Confidence 66666655444444444455555433 33333332 2222222234444444
Q ss_pred CCccccCCCCCCCCCCCccEEEccC-CcccccCCccccCcCCCcceEeeccccCCCCCcccccccccceEEeeCcccCCc
Q 039290 431 SCNISGGIPKELGNINNLTVIRLGN-NELTGTIPVTLGRLQKLQGLYLQNNKLEGSIPEDLCHLYRLANLYLGDNKLSGR 509 (1049)
Q Consensus 431 ~n~i~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 509 (1049)
+|+|+. +|.......+|+.|++++ |.++...+..|.++++|++|+|++|+|+...+..+.+ |+.|.+.++.--..
T Consensus 163 ~N~i~~-i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~---L~~L~~l~~~~l~~ 238 (350)
T 4ay9_X 163 KNGIQE-IHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLEN---LKKLRARSTYNLKK 238 (350)
T ss_dssp SSCCCE-ECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTT---CCEEECTTCTTCCC
T ss_pred cccccC-CChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhcc---chHhhhccCCCcCc
Confidence 444442 233333344566666653 4455333345666666666666666666333333333 33333333222224
Q ss_pred CchhccCcccCCceeecCcc
Q 039290 510 LPACLGNLTSLRDLSLGSNA 529 (1049)
Q Consensus 510 ~p~~~~~l~~L~~L~L~~N~ 529 (1049)
+| .+.++++|+.++++++.
T Consensus 239 lP-~l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 239 LP-TLEKLVALMEASLTYPS 257 (350)
T ss_dssp CC-CTTTCCSCCEEECSCHH
T ss_pred CC-CchhCcChhhCcCCCCc
Confidence 45 35666666666665543
No 352
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.85 E-value=5.6e-22 Score=215.40 Aligned_cols=165 Identities=16% Similarity=0.128 Sum_probs=128.5
Q ss_pred HHHHHHHhcCCCCCceecCCCcEEEEEEEeCCCcEEEEEEeecccCC------------------CHHHHHHHHHHHhhc
Q 039290 753 YQDLLRATDGFSENKLLGMGSFGSVYKGVLPDGMEIAAKVFHMEFDG------------------SLESFHAECKVMGSI 814 (1049)
Q Consensus 753 ~~~~~~~~~~~~~~~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~~~------------------~~~~~~~e~~~l~~l 814 (1049)
...+......|.+.+.||+|+||.||+|+..+|+.||+|+++..... ....+.+|+++++++
T Consensus 82 l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l 161 (282)
T 1zar_A 82 LHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL 161 (282)
T ss_dssp HHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhc
Confidence 34444555667788999999999999999978999999999643211 245688999999999
Q ss_pred CCCceeeEEeeeecCCeeEEEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeee
Q 039290 815 RHRNLVKIISSCSNNDFKALVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLL 894 (1049)
Q Consensus 815 ~hpniv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~ 894 (1049)
+ | +++.+++.. +..++||||++|++|.+ +.. .+...++.|+++|++||| +.||+||||||+|||+
T Consensus 162 ~--~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~-------~~~~~i~~qi~~~l~~lH---~~giiHrDlkp~NILl 226 (282)
T 1zar_A 162 Q--G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV-------ENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVLV 226 (282)
T ss_dssp T--T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC-------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEE
T ss_pred c--C-CCcCeEEec-cceEEEEEecCCCcHHH-cch-------hhHHHHHHHHHHHHHHHH---HCCCEeCCCCHHHEEE
Confidence 8 4 555555443 55699999999999998 422 224579999999999999 9999999999999999
Q ss_pred cCCCceEEecccCceecCCCccccccccccccCcccccccCC----------CCcCcccchHH
Q 039290 895 NESMVGHLSDFGIAKILGKEESMRQTKTLGTIGYMAPEYGRE----------GKVSRKCDVYS 947 (1049)
Q Consensus 895 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~----------~~~~~~~Dvws 947 (1049)
+ ++.+||+|||+|+. +..|+|||++.+ .++..++|+|.
T Consensus 227 ~-~~~vkl~DFG~a~~--------------~~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~ 274 (282)
T 1zar_A 227 S-EEGIWIIDFPQSVE--------------VGEEGWREILERDVRNIITYFSRTYRTEKDINS 274 (282)
T ss_dssp E-TTEEEECCCTTCEE--------------TTSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_pred E-CCcEEEEECCCCeE--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCChHH
Confidence 9 99999999999873 345788988743 34555566654
No 353
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.83 E-value=7.3e-22 Score=243.05 Aligned_cols=228 Identities=18% Similarity=0.144 Sum_probs=108.5
Q ss_pred CChhhHHHHHHHHHhcccCCCCcccccCC-CCCCCceeeeEEEcCCCCcEEEEEEeccccccccCCCCCCcchhhhhhcc
Q 039290 27 NVTTDQFALLALKEHIKHDPSNLLANNWS-TTSSVCSWIGVTCGVRNRRVTALNISYLGLTGTIPPQLGNLSFLAVLAIR 105 (1049)
Q Consensus 27 ~~~~d~~all~~k~~~~~~~~~~l~~~w~-~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~l~ 105 (1049)
....+++||+++......+.+.. .+.|. ..+..+.|.+++++. .+++.|+|.++++.+ +|. ..|+.++|+
T Consensus 129 ~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~--~~~~~l~L~~n~~~~-~~~-----~~l~~l~Ls 199 (727)
T 4b8c_D 129 LVDCTKQALMEMADTLTDSKTAK-KQQPTGDSTPSGTATNSAVST--PLTPKIELFANGKDE-ANQ-----ALLQHKKLS 199 (727)
T ss_dssp ---CCCHHHHHHHHHHHHHHTTC---------------------------------------------------------
T ss_pred ccccchhhhhhhhhhcccccCcc-cCCCcCCCCccccCCCceecC--CccceEEeeCCCCCc-chh-----hHhhcCccC
Confidence 34678899999998875443332 23553 344567899999864 579999999888875 333 245566666
Q ss_pred cCccccccCcccccccCCcEeccccCCccccCcccccccCCccEEEeCCCCccCCCcccccCCCcccEEcCCCccCcccc
Q 039290 106 NNSFFGSLPEELSHLRGLKYFDFRFNNFHIEIPSWFVSLPRLQHLLLKHNSFVGKIPETIGYLSLLQELDLSDNQLSGTI 185 (1049)
Q Consensus 106 ~n~~~g~~p~~~~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~i 185 (1049)
.|.+. .++++.|++. ..|..|..++.|++|+|++|.+. .+|..+..+++|++|+|++|+|+ .+
T Consensus 200 ~~~i~--------------~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~l 262 (727)
T 4b8c_D 200 QYSID--------------EDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-EL 262 (727)
T ss_dssp -------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CC
T ss_pred ccccc--------------Ccccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-cc
Confidence 66553 3455566665 56777888888888888888887 77877778888888888888888 77
Q ss_pred CCCcccccccCCCCccceEEeeccccCCCCCCCcccccccceecccccccccccCCCCccccccceEEeccccccccCcc
Q 039290 186 PSSIFNISSCQNLPVLEGLFISYNQLTGPIPTNLWKCRELHVVSLAFNKFQGGIPRDIGNLTSVRNLFLGNNSLIGEIPN 265 (1049)
Q Consensus 186 p~~~~~l~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 265 (1049)
|.++++ +++|++|+|++|+|+ .+|..+..+++|++|+|++|.|+ .+|..|+++++|++|+|++|.+++.+|.
T Consensus 263 p~~~~~------l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~ 334 (727)
T 4b8c_D 263 PAEIKN------LSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLK 334 (727)
T ss_dssp CGGGGG------GTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHH
T ss_pred ChhhhC------CCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChH
Confidence 776654 344777777777777 66777777777777777777665 5666677777777777777777666666
Q ss_pred ccccccce-EEEeeccccCCCccc
Q 039290 266 EIGNLRNL-EVLGVQSSNLAGLIP 288 (1049)
Q Consensus 266 ~l~~l~~L-~~L~L~~n~l~~~~p 288 (1049)
.++.+... ..|+|++|.+++.+|
T Consensus 335 ~~~~~~~~~~~l~l~~N~l~~~~p 358 (727)
T 4b8c_D 335 ILTEKSVTGLIFYLRDNRPEIPLP 358 (727)
T ss_dssp HHHHHHHHHHHHHHHHCCCCCCCC
T ss_pred HHhhcchhhhHHhhccCcccCcCc
Confidence 66544221 224455555554444
No 354
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.82 E-value=6.9e-21 Score=199.22 Aligned_cols=157 Identities=24% Similarity=0.324 Sum_probs=122.7
Q ss_pred ceEEeeCcccCCcCchhccCcccCCceeecCcccccccC-cccccccccccccccCCccCCCCccCcCCCcceeEeeccc
Q 039290 497 ANLYLGDNKLSGRLPACLGNLTSLRDLSLGSNALTSIIP-STLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSL 575 (1049)
Q Consensus 497 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 575 (1049)
+.+++++|.++ .+|..+. ..+++|+|++|+++++.| ..|..+++|++|+|++|+|++..+..|..+++|++|+|++
T Consensus 14 ~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 45666666665 3454442 235677777777776644 4466777777777777777776666778888888888888
Q ss_pred ccccccccccccCCCcccEEEeecccccCCccccccCccCCcEEeccCccccCCcccccccccccceeeccCCcccccCC
Q 039290 576 NALSGVIPVTIGGLQGLQLLSLRYNRLQGPIPESFGGLKSLNFVDMSNNNLSGTIPKSMEALSYLKHLNLSFNQLEGEIP 655 (1049)
Q Consensus 576 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p 655 (1049)
|+|++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..+..+++|+.|++++|+|.|.++
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 88887778888888999999999999998888889999999999999999988778889999999999999999998887
Q ss_pred C
Q 039290 656 T 656 (1049)
Q Consensus 656 ~ 656 (1049)
.
T Consensus 171 l 171 (220)
T 2v70_A 171 L 171 (220)
T ss_dssp G
T ss_pred h
Confidence 4
No 355
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.82 E-value=9e-23 Score=243.29 Aligned_cols=216 Identities=21% Similarity=0.211 Sum_probs=101.7
Q ss_pred CCcchhhhhhcccCccccccCcccccccCCcEeccccCCccccCcccccccCCccEEEeCCCCccCCCcccccCCCcccE
Q 039290 94 GNLSFLAVLAIRNNSFFGSLPEELSHLRGLKYFDFRFNNFHIEIPSWFVSLPRLQHLLLKHNSFVGKIPETIGYLSLLQE 173 (1049)
Q Consensus 94 ~~l~~L~~L~l~~n~~~g~~p~~~~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 173 (1049)
..++.|+.|+|++|+++ .||++|++|++|+.|++++|.....+|..+ ..+.+.+.+|..++.+++|+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll-----------~~~~~~~~~~~~l~~l~~L~~ 413 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLM-----------RALDPLLYEKETLQYFSTLKA 413 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHH-----------HHHCTGGGHHHHHHHHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHH-----------HhcccccCCHHHHHHHHhccc
Confidence 34555556666666554 556666666666666654443111111000 001144556666666666666
Q ss_pred Ec-CCCccCccccCCCcccccccCCCCccceEEeeccccCCCCCCCcccccccceecccccccccccCCCCccccccceE
Q 039290 174 LD-LSDNQLSGTIPSSIFNISSCQNLPVLEGLFISYNQLTGPIPTNLWKCRELHVVSLAFNKFQGGIPRDIGNLTSVRNL 252 (1049)
Q Consensus 174 L~-Ls~N~l~g~ip~~~~~l~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 252 (1049)
|| ++.|.+. .|+.+++++|.+++..+ ..|+.|+|++|++++ +|. |+++++|+.|
T Consensus 414 L~~l~~n~~~-----------------~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L 468 (567)
T 1dce_A 414 VDPMRAAYLD-----------------DLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHL 468 (567)
T ss_dssp HCGGGHHHHH-----------------HHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEE
T ss_pred Ccchhhcccc-----------------hhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEe
Confidence 66 5555443 13333344444432111 124444444444443 343 4455555555
Q ss_pred EeccccccccCccccccccceEEEeeccccCCCccccccccccccceEEeccCccCCCC-CCcccCCCCCccEEEcCCCC
Q 039290 253 FLGNNSLIGEIPNEIGNLRNLEVLGVQSSNLAGLIPASIFNISTLKELAVTDNDLLGSL-PSSIDLGLPNLERLFLGENN 331 (1049)
Q Consensus 253 ~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~-p~~~~~~l~~L~~L~L~~N~ 331 (1049)
+|++|+++ .+|..|+++++|+.|+|++|++++ +| .+.++++|++|+|++|++++.. |..+. .+++|+.|+|++|.
T Consensus 469 ~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~-~l~~L~~L~L~~N~ 544 (567)
T 1dce_A 469 DLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLV-SCPRLVLLNLQGNS 544 (567)
T ss_dssp ECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGG-GCTTCCEEECTTSG
T ss_pred ecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHh-cCCCCCEEEecCCc
Confidence 55555554 444455555555555555555544 23 4455555555555555554433 43333 45555555555555
Q ss_pred CCCCCCcc---ccCCCCCceee
Q 039290 332 FSGTIPSS---LTNISELSVLD 350 (1049)
Q Consensus 332 l~~~~p~~---~~~l~~L~~L~ 350 (1049)
+++.+|.. +..+++|+.|+
T Consensus 545 l~~~~~~~~~l~~~lp~L~~L~ 566 (567)
T 1dce_A 545 LCQEEGIQERLAEMLPSVSSIL 566 (567)
T ss_dssp GGGSSSCTTHHHHHCTTCSEEE
T ss_pred CCCCccHHHHHHHHCcccCccC
Confidence 55433321 22355666654
No 356
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.82 E-value=2.7e-20 Score=193.28 Aligned_cols=161 Identities=25% Similarity=0.277 Sum_probs=78.3
Q ss_pred CccEEEccCCcccccCCccccCcCCCcceEeeccccCCCCCcccccccccceEEeeCcccCCcCchhccCcccCCceeec
Q 039290 447 NLTVIRLGNNELTGTIPVTLGRLQKLQGLYLQNNKLEGSIPEDLCHLYRLANLYLGDNKLSGRLPACLGNLTSLRDLSLG 526 (1049)
Q Consensus 447 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 526 (1049)
+|++|+|++|++++..+..|+.+++|++|++++|++++..+..|..+++|++|++++|++++..+..+.++++|++|+++
T Consensus 29 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 108 (208)
T 2o6s_A 29 QTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALN 108 (208)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcC
Confidence 45555555555554444444445555555555555443333334444444444444444443333333444444444444
Q ss_pred CcccccccCcccccccccccccccCCccCCCCccCcCCCcceeEeecccccccccccccccCCCcccEEEeecccccCCc
Q 039290 527 SNALTSIIPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALSGVIPVTIGGLQGLQLLSLRYNRLQGPI 606 (1049)
Q Consensus 527 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 606 (1049)
+|+++++ .+..+..+++|++|++++|++++..+..|..+++|+.|+|++|.+.+
T Consensus 109 ~N~l~~~------------------------~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-- 162 (208)
T 2o6s_A 109 TNQLQSL------------------------PDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-- 162 (208)
T ss_dssp SSCCCCC------------------------CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC--
T ss_pred CCcCccc------------------------CHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec--
Confidence 4444433 33334444444445555555544444445555556666666665543
Q ss_pred cccccCccCCcEEeccCccccCCccccccccc
Q 039290 607 PESFGGLKSLNFVDMSNNNLSGTIPKSMEALS 638 (1049)
Q Consensus 607 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 638 (1049)
.+++|++|+++.|+++|.+|..++.++
T Consensus 163 -----~~~~l~~L~~~~n~~~g~ip~~~~~l~ 189 (208)
T 2o6s_A 163 -----TCPGIRYLSEWINKHSGVVRNSAGSVA 189 (208)
T ss_dssp -----CTTTTHHHHHHHHHCTTTBBCTTSSBC
T ss_pred -----CCCCHHHHHHHHHhCCceeeccCcccc
Confidence 234566666666666666666655554
No 357
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.82 E-value=1.1e-20 Score=197.52 Aligned_cols=157 Identities=20% Similarity=0.297 Sum_probs=109.0
Q ss_pred ceEEeeCcccCCcCchhccCcccCCceeecCcccccccCcccccccccccccccCCccCCCCccCcCCCcceeEeecccc
Q 039290 497 ANLYLGDNKLSGRLPACLGNLTSLRDLSLGSNALTSIIPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLN 576 (1049)
Q Consensus 497 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 576 (1049)
+.+++++|.++ .+|..+. ++|+.|+|++|+++++.+..|..+++|++|+|++|++++..|..|..+++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 34555555555 3444332 45666666666666655556666666666666666666656666666777777777777
Q ss_pred cccccccccccCCCcccEEEeecccccCCccccccCccCCcEEeccCccccCCcccccccccccceeeccCCcccccCCC
Q 039290 577 ALSGVIPVTIGGLQGLQLLSLRYNRLQGPIPESFGGLKSLNFVDMSNNNLSGTIPKSMEALSYLKHLNLSFNQLEGEIPT 656 (1049)
Q Consensus 577 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~ 656 (1049)
+|+...+..|.++++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..+..+++|++|++++|+|.|.++.
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~l 170 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHL 170 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSGGG
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCCcc
Confidence 77766566677778888888888888877777888888888888888888866666777788888888888888877653
No 358
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.81 E-value=2.5e-20 Score=211.08 Aligned_cols=180 Identities=24% Similarity=0.189 Sum_probs=107.7
Q ss_pred cEEEccCCcccccCCccccCcCCCcceEeeccccCCCCCcccc-cccccceEEeeCcccCCcCchhccCcccCCceeecC
Q 039290 449 TVIRLGNNELTGTIPVTLGRLQKLQGLYLQNNKLEGSIPEDLC-HLYRLANLYLGDNKLSGRLPACLGNLTSLRDLSLGS 527 (1049)
Q Consensus 449 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 527 (1049)
+.+++++|+++ .+|..+. +.++.|+|++|+|++..+..+. .+++|+.|+|++|+|++..+..|.++++|++|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 46666666666 3454432 2355666666666544444444 555555555555555544444455555555555555
Q ss_pred cccccccCcccccccccccccccCCccCCCCccCcCCCcceeEeecccccccccccccccCCCcccEEEeecccccCCcc
Q 039290 528 NALTSIIPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALSGVIPVTIGGLQGLQLLSLRYNRLQGPIP 607 (1049)
Q Consensus 528 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~ 607 (1049)
|++++ ..+..|..+++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+
T Consensus 98 N~l~~------------------------~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~ 153 (361)
T 2xot_A 98 NHLHT------------------------LDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPV 153 (361)
T ss_dssp SCCCE------------------------ECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCG
T ss_pred CcCCc------------------------CCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCH
Confidence 55544 444445555566666666666665666667777777777777777775555
Q ss_pred ccc---cCccCCcEEeccCccccCCcccccccccc--cceeeccCCcccccCC
Q 039290 608 ESF---GGLKSLNFVDMSNNNLSGTIPKSMEALSY--LKHLNLSFNQLEGEIP 655 (1049)
Q Consensus 608 ~~~---~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~--L~~l~l~~N~l~~~~p 655 (1049)
..| ..+++|+.|||++|+|++..+..+..++. ++.|+|++|+|.|.+.
T Consensus 154 ~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~C~ 206 (361)
T 2xot_A 154 ELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECDCK 206 (361)
T ss_dssp GGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECCHH
T ss_pred HHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccCCcC
Confidence 555 45777777777777777555566666666 3777888888877664
No 359
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.81 E-value=6.1e-20 Score=193.36 Aligned_cols=164 Identities=25% Similarity=0.333 Sum_probs=95.2
Q ss_pred CCCCCCCceeeeEEEcCCCCcEEEEEEeccccccccCCCCCCcchhhhhhcccCccccccCcccccccCCcEeccccCCc
Q 039290 54 WSTTSSVCSWIGVTCGVRNRRVTALNISYLGLTGTIPPQLGNLSFLAVLAIRNNSFFGSLPEELSHLRGLKYFDFRFNNF 133 (1049)
Q Consensus 54 w~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~l~~n~~~g~~p~~~~~L~~L~~L~l~~n~~ 133 (1049)
|..+...|+|++|.|+.. ++. .+|..+. ++|++|+|++|++
T Consensus 12 ~~~~~~~Cs~~~v~c~~~------------~l~-~ip~~~~--------------------------~~L~~L~Ls~n~i 52 (229)
T 3e6j_A 12 ACPSQCSCSGTTVDCRSK------------RHA-SVPAGIP--------------------------TNAQILYLHDNQI 52 (229)
T ss_dssp CCCTTCEEETTEEECTTS------------CCS-SCCSCCC--------------------------TTCSEEECCSSCC
T ss_pred cCCCCCEEeCCEeEccCC------------CcC-ccCCCCC--------------------------CCCCEEEcCCCcc
Confidence 455778899999999642 222 4554332 3445555555555
Q ss_pred cccCcccccccCCccEEEeCCCCccCCCcccccCCCcccEEcCCCccCccccCCCcccccccCCCCccceEEeeccccCC
Q 039290 134 HIEIPSWFVSLPRLQHLLLKHNSFVGKIPETIGYLSLLQELDLSDNQLSGTIPSSIFNISSCQNLPVLEGLFISYNQLTG 213 (1049)
Q Consensus 134 ~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~l~~l~~L~~L~l~~N~l~~ 213 (1049)
++..|..|.++++|++|+|++|++++..+..|+.+++|++|+|++|+++ .+|...+ ..+++|++|+|++|+++
T Consensus 53 ~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~-----~~l~~L~~L~Ls~N~l~- 125 (229)
T 3e6j_A 53 TKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLT-VLPSAVF-----DRLVHLKELFMCCNKLT- 125 (229)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTT-----TTCTTCCEEECCSSCCC-
T ss_pred CccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCC-ccChhHh-----CcchhhCeEeccCCccc-
Confidence 5555555555555555555555554333344455555555555555555 3333221 23344555566666555
Q ss_pred CCCCCcccccccceecccccccccccCCCCccccccceEEeccccccccC
Q 039290 214 PIPTNLWKCRELHVVSLAFNKFQGGIPRDIGNLTSVRNLFLGNNSLIGEI 263 (1049)
Q Consensus 214 ~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 263 (1049)
.+|..+..+++|++|+|++|++++..+..|..+++|+.|+|++|.+....
T Consensus 126 ~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 126 ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTB
T ss_pred ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCc
Confidence 55556666666666666666666555556777777777777777776543
No 360
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.79 E-value=3.5e-19 Score=213.54 Aligned_cols=192 Identities=19% Similarity=0.282 Sum_probs=141.9
Q ss_pred CcchhhhhhcccCccccccCcccccccCCcEeccccCCccccCcccccccCCccEEEeCCCCccCCCcccccCCCcccEE
Q 039290 95 NLSFLAVLAIRNNSFFGSLPEELSHLRGLKYFDFRFNNFHIEIPSWFVSLPRLQHLLLKHNSFVGKIPETIGYLSLLQEL 174 (1049)
Q Consensus 95 ~l~~L~~L~l~~n~~~g~~p~~~~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 174 (1049)
.+..+..+.++.+.+...++ +..|.+|++|++++|.+. .+| .|..+++|++|+|++|.+++..| ++.+++|++|
T Consensus 19 ~l~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L 92 (605)
T 1m9s_A 19 AFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWL 92 (605)
T ss_dssp HHHHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEE
T ss_pred HHHHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEE
Confidence 35567777888887765443 568888999999998887 344 58888999999999999886544 8888999999
Q ss_pred cCCCccCccccCCCcccccccCCCCccceEEeeccccCCCCCCCcccccccceecccccccccccCCCCccccccceEEe
Q 039290 175 DLSDNQLSGTIPSSIFNISSCQNLPVLEGLFISYNQLTGPIPTNLWKCRELHVVSLAFNKFQGGIPRDIGNLTSVRNLFL 254 (1049)
Q Consensus 175 ~Ls~N~l~g~ip~~~~~l~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 254 (1049)
+|++|++++ +| .+ ..+++|++|+|++|++++ + +.+..+++|+.|+|++|++++. ..++.+++|+.|+|
T Consensus 93 ~Ls~N~l~~-l~-~l------~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~L 160 (605)
T 1m9s_A 93 FLDENKIKD-LS-SL------KDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSL 160 (605)
T ss_dssp ECCSSCCCC-CT-TS------TTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEEC
T ss_pred ECcCCCCCC-Ch-hh------ccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEEC
Confidence 999998873 44 23 456678888888888885 3 4577777777777777777754 56777777777777
Q ss_pred ccccccccCccccccccceEEEeeccccCCCccccccccccccceEEeccCccC
Q 039290 255 GNNSLIGEIPNEIGNLRNLEVLGVQSSNLAGLIPASIFNISTLKELAVTDNDLL 308 (1049)
Q Consensus 255 ~~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~ 308 (1049)
++|++++..| +..+++|+.|+|++|++.+. ..+..+++|+.|+|++|.+.
T Consensus 161 s~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~ 210 (605)
T 1m9s_A 161 EDNQISDIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECL 210 (605)
T ss_dssp CSSCCCCCGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEE
T ss_pred cCCcCCCchh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCc
Confidence 7777776555 77777777777777777764 34666677777777777665
No 361
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.79 E-value=3.1e-19 Score=195.32 Aligned_cols=172 Identities=27% Similarity=0.448 Sum_probs=91.9
Q ss_pred CCCCCccEEEccCCcccccCCccccCcCCCcceEeeccccCCCCCcccccccccceEEeeCcccCCcCchhccCcccCCc
Q 039290 443 GNINNLTVIRLGNNELTGTIPVTLGRLQKLQGLYLQNNKLEGSIPEDLCHLYRLANLYLGDNKLSGRLPACLGNLTSLRD 522 (1049)
Q Consensus 443 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 522 (1049)
..+++|+.|++++|.++.. + .+..+++|++|+|++|++++..+ +..+++|++|++++|++++ +| .+..+++|++
T Consensus 43 ~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~ 116 (291)
T 1h6t_A 43 NELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKS 116 (291)
T ss_dssp HHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCE
T ss_pred hhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCE
Confidence 3456666666666666633 2 35556666666666666664322 5566666666666666653 22 2555556666
Q ss_pred eeecCcccccccCcccccccccccccccCCccCCCCccCcCCCcceeEeecccccccccccccccCCCcccEEEeecccc
Q 039290 523 LSLGSNALTSIIPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALSGVIPVTIGGLQGLQLLSLRYNRL 602 (1049)
Q Consensus 523 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 602 (1049)
|++++|+++++ ..+..+++|+.|++++|++++ . ..++.+++|+.|+|++|+|
T Consensus 117 L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~------------------------~--~~l~~l~~L~~L~L~~N~l 168 (291)
T 1h6t_A 117 LSLEHNGISDI--NGLVHLPQLESLYLGNNKITD------------------------I--TVLSRLTKLDTLSLEDNQI 168 (291)
T ss_dssp EECTTSCCCCC--GGGGGCTTCCEEECCSSCCCC------------------------C--GGGGGCTTCSEEECCSSCC
T ss_pred EECCCCcCCCC--hhhcCCCCCCEEEccCCcCCc------------------------c--hhhccCCCCCEEEccCCcc
Confidence 66666655542 234445555555555555443 3 3445555555555555555
Q ss_pred cCCccccccCccCCcEEeccCccccCCcccccccccccceeeccCCcccc
Q 039290 603 QGPIPESFGGLKSLNFVDMSNNNLSGTIPKSMEALSYLKHLNLSFNQLEG 652 (1049)
Q Consensus 603 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~ 652 (1049)
++..| +..+++|++|+|++|++++ +| .+..+++|+.|++++|++..
T Consensus 169 ~~~~~--l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 169 SDIVP--LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CCCGG--GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEEC
T ss_pred ccchh--hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCcccC
Confidence 54333 5555555555555555542 22 24555555555555555543
No 362
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.78 E-value=4.4e-19 Score=186.82 Aligned_cols=155 Identities=23% Similarity=0.274 Sum_probs=106.3
Q ss_pred ceEEeeCcccCCcCchhccCcccCCceeecCcccccccCcccccccccccccccCCccCCCCccCcCCCcceeEeecccc
Q 039290 497 ANLYLGDNKLSGRLPACLGNLTSLRDLSLGSNALTSIIPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLN 576 (1049)
Q Consensus 497 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 576 (1049)
+.++.+++.++ .+|..+. ++|++|+|++|+++++.|..|..+++|++|+|++|+|+...+..|..+++|++|+|++|
T Consensus 22 ~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N 98 (229)
T 3e6j_A 22 TTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTN 98 (229)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCC
Confidence 44555555554 3443332 55666666666666655666666666666666666665555555666777777777777
Q ss_pred cccccccccccCCCcccEEEeecccccCCccccccCccCCcEEeccCccccCCcccccccccccceeeccCCcccccCC
Q 039290 577 ALSGVIPVTIGGLQGLQLLSLRYNRLQGPIPESFGGLKSLNFVDMSNNNLSGTIPKSMEALSYLKHLNLSFNQLEGEIP 655 (1049)
Q Consensus 577 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p 655 (1049)
+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|++|+|++|+|++..+..+..+++|+.|++++|+|.|.++
T Consensus 99 ~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 99 QLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred cCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 777666666777788888888888887 567777788888888888888876666667778888888888888887776
No 363
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.78 E-value=3.8e-19 Score=194.64 Aligned_cols=168 Identities=27% Similarity=0.390 Sum_probs=127.3
Q ss_pred ccccEEEccCCccccCCCCCCCCCCCccEEEccCCcccccCCccccCcCCCcceEeeccccCCCCCcccccccccceEEe
Q 039290 422 ISMKSLSMESCNISGGIPKELGNINNLTVIRLGNNELTGTIPVTLGRLQKLQGLYLQNNKLEGSIPEDLCHLYRLANLYL 501 (1049)
Q Consensus 422 ~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 501 (1049)
.+|+.|++++|.+... + .+..+++|++|+|++|++++..+ +..+++|++|+|++|++++ + +.+..+++|++|++
T Consensus 46 ~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L 119 (291)
T 1h6t_A 46 NSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-L-SSLKDLKKLKSLSL 119 (291)
T ss_dssp HTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-G-GGGTTCTTCCEEEC
T ss_pred CcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-C-hhhccCCCCCEEEC
Confidence 3899999999999854 3 48899999999999999997554 9999999999999999985 3 35999999999999
Q ss_pred eCcccCCcCchhccCcccCCceeecCcccccccCcccccccccccccccCCccCCCCccCcCCCcceeEeeccccccccc
Q 039290 502 GDNKLSGRLPACLGNLTSLRDLSLGSNALTSIIPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALSGV 581 (1049)
Q Consensus 502 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 581 (1049)
++|++++. ..+..+++|+.|++++|+++++ ..+..+++|+.|++++|++++..+ +..+++|++|++++|+|++.
T Consensus 120 ~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l 193 (291)
T 1h6t_A 120 EHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL 193 (291)
T ss_dssp TTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC
T ss_pred CCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCCC
Confidence 99999853 4689999999999999999985 567777777777777777765333 44555555555555555432
Q ss_pred ccccccCCCcccEEEeeccccc
Q 039290 582 IPVTIGGLQGLQLLSLRYNRLQ 603 (1049)
Q Consensus 582 ~p~~~~~l~~L~~L~Ls~N~l~ 603 (1049)
| .+..+++|+.|++++|+++
T Consensus 194 -~-~l~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 194 -R-ALAGLKNLDVLELFSQECL 213 (291)
T ss_dssp -G-GGTTCTTCSEEEEEEEEEE
T ss_pred -h-hhccCCCCCEEECcCCccc
Confidence 1 2444444444444444444
No 364
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.78 E-value=3.7e-19 Score=213.34 Aligned_cols=183 Identities=25% Similarity=0.335 Sum_probs=155.4
Q ss_pred CCCcchhhhhhcccCccccccCcccccccCCcEeccccCCccccCcccccccCCccEEEeCCCCccCCCcccccCCCccc
Q 039290 93 LGNLSFLAVLAIRNNSFFGSLPEELSHLRGLKYFDFRFNNFHIEIPSWFVSLPRLQHLLLKHNSFVGKIPETIGYLSLLQ 172 (1049)
Q Consensus 93 ~~~l~~L~~L~l~~n~~~g~~p~~~~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 172 (1049)
+..|+.|+.|++++|.+. .+| .++.|++|++|+|++|++.+..| +..+++|++|+|++|.+++ +| .++.+++|+
T Consensus 39 ~~~L~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~ 112 (605)
T 1m9s_A 39 QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLK 112 (605)
T ss_dssp HHHHTTCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCC
T ss_pred hhcCCCCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCC
Confidence 456788999999999987 455 68999999999999999997655 8999999999999999984 44 799999999
Q ss_pred EEcCCCccCccccCCCcccccccCCCCccceEEeeccccCCCCCCCcccccccceecccccccccccCCCCccccccceE
Q 039290 173 ELDLSDNQLSGTIPSSIFNISSCQNLPVLEGLFISYNQLTGPIPTNLWKCRELHVVSLAFNKFQGGIPRDIGNLTSVRNL 252 (1049)
Q Consensus 173 ~L~Ls~N~l~g~ip~~~~~l~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 252 (1049)
+|+|++|++++ +| . +..+++|+.|+|++|++++. ..+..+++|+.|+|++|++++..| +..+++|+.|
T Consensus 113 ~L~Ls~N~l~~-l~-~------l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L 180 (605)
T 1m9s_A 113 SLSLEHNGISD-IN-G------LVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNL 180 (605)
T ss_dssp EEECTTSCCCC-CG-G------GGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEE
T ss_pred EEEecCCCCCC-Cc-c------ccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEE
Confidence 99999999984 43 2 34567899999999999964 678899999999999999998777 9999999999
Q ss_pred EeccccccccCccccccccceEEEeeccccCCCcccccccccc
Q 039290 253 FLGNNSLIGEIPNEIGNLRNLEVLGVQSSNLAGLIPASIFNIS 295 (1049)
Q Consensus 253 ~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~ 295 (1049)
+|++|++++. ..+..+++|+.|+|++|++.+.....+..+.
T Consensus 181 ~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p~~~~~~l~ 221 (605)
T 1m9s_A 181 YLSKNHISDL--RALAGLKNLDVLELFSQECLNKPINHQSNLV 221 (605)
T ss_dssp ECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCCCCCCSSCE
T ss_pred ECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCcccccccEE
Confidence 9999999864 4699999999999999999876444444433
No 365
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.78 E-value=5.6e-19 Score=184.68 Aligned_cols=135 Identities=23% Similarity=0.273 Sum_probs=97.9
Q ss_pred ceEEeeCcccCCcCc-hhccCcccCCceeecCcccccccCcccccccccccccccCCccCCCCccCcCCCcceeEeeccc
Q 039290 497 ANLYLGDNKLSGRLP-ACLGNLTSLRDLSLGSNALTSIIPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSL 575 (1049)
Q Consensus 497 ~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 575 (1049)
++|+|++|++++..| ..|.++++|++|+|++|+++++.+..|..+++|++|+|++|++++..+..|..+++|++|+|++
T Consensus 35 ~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 114 (220)
T 2v70_A 35 AELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRS 114 (220)
T ss_dssp SEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTT
T ss_pred CEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCC
Confidence 445555555543322 3355566666666666666665556666666666666666666666666677777777888888
Q ss_pred ccccccccccccCCCcccEEEeecccccCCccccccCccCCcEEeccCccccCCcc
Q 039290 576 NALSGVIPVTIGGLQGLQLLSLRYNRLQGPIPESFGGLKSLNFVDMSNNNLSGTIP 631 (1049)
Q Consensus 576 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 631 (1049)
|+|++..|..|.++++|+.|+|++|+|++..|..|..+++|++|+|++|++++..+
T Consensus 115 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 115 NRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 88887778888888899999999999998888899999999999999999987554
No 366
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.78 E-value=6.3e-19 Score=184.29 Aligned_cols=134 Identities=19% Similarity=0.277 Sum_probs=95.5
Q ss_pred ccceEEeeCcccCCcCchhccCcccCCceeecCcccccccCcccccccccccccccCCccCCCCccCcCCCcceeEeecc
Q 039290 495 RLANLYLGDNKLSGRLPACLGNLTSLRDLSLGSNALTSIIPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLS 574 (1049)
Q Consensus 495 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 574 (1049)
+|+.|++++|+|++..+..|..+++|++|+|++|+++++.|..|..+++|++|+|++|+|+...+..|..+++|++|+|+
T Consensus 33 ~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 112 (220)
T 2v9t_B 33 TITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLN 112 (220)
T ss_dssp TCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECC
Confidence 44555555555554444455555566666666666665556666666666666666666665555556777777777777
Q ss_pred cccccccccccccCCCcccEEEeecccccCCccccccCccCCcEEeccCccccC
Q 039290 575 LNALSGVIPVTIGGLQGLQLLSLRYNRLQGPIPESFGGLKSLNFVDMSNNNLSG 628 (1049)
Q Consensus 575 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 628 (1049)
+|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|++|+|++|++.+
T Consensus 113 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 113 ANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 888877778888888889999999999988888888889999999999998875
No 367
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.78 E-value=5.3e-21 Score=227.99 Aligned_cols=220 Identities=19% Similarity=0.142 Sum_probs=127.6
Q ss_pred cccCCccEEEeCCCCccCCCcccccCCCcccEEcCCCccCccccCCCcccccccCCCCccceEEeeccccCCCCCCCccc
Q 039290 142 VSLPRLQHLLLKHNSFVGKIPETIGYLSLLQELDLSDNQLSGTIPSSIFNISSCQNLPVLEGLFISYNQLTGPIPTNLWK 221 (1049)
Q Consensus 142 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~l~~l~~L~~L~l~~N~l~~~~p~~l~~ 221 (1049)
...++|+.|+|++|+++ .+|++|+++++|+.|++++|.....+|.. +..+.+.+.+|..+..
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~l-----------------l~~~~~~~~~~~~l~~ 407 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILL-----------------MRALDPLLYEKETLQY 407 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHH-----------------HHHHCTGGGHHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHH-----------------HHhcccccCCHHHHHH
Confidence 56778888888888887 78888888888888888776521122110 0112233445555555
Q ss_pred ccccceec-ccccccccccCCCCccccccceEEeccccccccCccccccccceEEEeeccccCCCccccccccccccceE
Q 039290 222 CRELHVVS-LAFNKFQGGIPRDIGNLTSVRNLFLGNNSLIGEIPNEIGNLRNLEVLGVQSSNLAGLIPASIFNISTLKEL 300 (1049)
Q Consensus 222 l~~L~~L~-L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 300 (1049)
+++|+.|+ ++.|.+ .+|+.+.+++|.+++..+ ..|+.|+|++|++++ +|. +..+++|+.|
T Consensus 408 l~~L~~L~~l~~n~~-----------~~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L 468 (567)
T 1dce_A 408 FSTLKAVDPMRAAYL-----------DDLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHL 468 (567)
T ss_dssp HHHHHHHCGGGHHHH-----------HHHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEE
T ss_pred HHhcccCcchhhccc-----------chhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEe
Confidence 56666665 444433 234444455555442211 125555555555554 243 5555555666
Q ss_pred EeccCccCCCCCCcccCCCCCccEEEcCCCCCCCCCCccccCCCCCceeecccCccccCc-ccccccccccceeeccccc
Q 039290 301 AVTDNDLLGSLPSSIDLGLPNLERLFLGENNFSGTIPSSLTNISELSVLDFGFNSFSGLI-PTTFGNLRSLKLLSLAGNV 379 (1049)
Q Consensus 301 ~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~ 379 (1049)
+|++|+++ .+|..+. .+++|+.|+|++|+|++ +| .++.+++|++|+|++|+|++.. |..|+.+++|+.|+|++|.
T Consensus 469 ~Ls~N~l~-~lp~~~~-~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~ 544 (567)
T 1dce_A 469 DLSHNRLR-ALPPALA-ALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNS 544 (567)
T ss_dssp ECCSSCCC-CCCGGGG-GCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSG
T ss_pred ecCccccc-ccchhhh-cCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCc
Confidence 66666555 5555443 56666666666666664 45 5666667777777777776655 6666777777777777777
Q ss_pred ccCCCCCcccccccccCCCCcEEEc
Q 039290 380 LTSPTPDLSFLSSLTSCRNLEIIYL 404 (1049)
Q Consensus 380 l~~~~~~~~~l~~l~~l~~L~~L~L 404 (1049)
+++.++... ..+..+++|+.|++
T Consensus 545 l~~~~~~~~--~l~~~lp~L~~L~l 567 (567)
T 1dce_A 545 LCQEEGIQE--RLAEMLPSVSSILT 567 (567)
T ss_dssp GGGSSSCTT--HHHHHCTTCSEEEC
T ss_pred CCCCccHHH--HHHHHCcccCccCC
Confidence 766654321 11334666776653
No 368
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.77 E-value=3.1e-19 Score=202.01 Aligned_cols=181 Identities=23% Similarity=0.228 Sum_probs=142.9
Q ss_pred ccEEEccCCccccCCCCCCCCCCCccEEEccCCcccccCCcccc-CcCCCcceEeeccccCCCCCcccccccccceEEee
Q 039290 424 MKSLSMESCNISGGIPKELGNINNLTVIRLGNNELTGTIPVTLG-RLQKLQGLYLQNNKLEGSIPEDLCHLYRLANLYLG 502 (1049)
Q Consensus 424 L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 502 (1049)
-+.+++++++++. +|..+. +.++.|+|++|+|++..+..|. .+++|++|+|++|+|++..+..|..+++|++|+|+
T Consensus 20 ~~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 96 (361)
T 2xot_A 20 SNILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLS 96 (361)
T ss_dssp TTEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECC
Confidence 4689999999984 676654 4689999999999988888888 99999999999999998888899999999999999
Q ss_pred CcccCCcCchhccCcccCCceeecCcccccccCcccccccccccccccCCccCCCCccCcCCCcceeEeecccccccccc
Q 039290 503 DNKLSGRLPACLGNLTSLRDLSLGSNALTSIIPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALSGVI 582 (1049)
Q Consensus 503 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 582 (1049)
+|+|++..+..|.++++|++|+|++|+++++.|..|..+++|+.|+|++|+|++..+..|..
T Consensus 97 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~------------------ 158 (361)
T 2xot_A 97 SNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKD------------------ 158 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC-------------------
T ss_pred CCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcC------------------
Confidence 99999877788999999999999999999887888877777777777777776533332210
Q ss_pred cccccCCCcccEEEeecccccCCccccccCccC--CcEEeccCccccC
Q 039290 583 PVTIGGLQGLQLLSLRYNRLQGPIPESFGGLKS--LNFVDMSNNNLSG 628 (1049)
Q Consensus 583 p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~--L~~L~Ls~N~l~~ 628 (1049)
+..+++|+.|+|++|+|++..+..|..++. |+.|+|++|++..
T Consensus 159 ---~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 159 ---GNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp ------CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEEC
T ss_pred ---cccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccC
Confidence 144566666677777766555566666665 3667777777764
No 369
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.75 E-value=4.6e-19 Score=190.76 Aligned_cols=168 Identities=24% Similarity=0.359 Sum_probs=84.4
Q ss_pred CCCccEEEccCCcccccCCccccCcCCCcceEeeccccCCCCCcccccccccceEEeeCcccCCcCchhccCcccCCcee
Q 039290 445 INNLTVIRLGNNELTGTIPVTLGRLQKLQGLYLQNNKLEGSIPEDLCHLYRLANLYLGDNKLSGRLPACLGNLTSLRDLS 524 (1049)
Q Consensus 445 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 524 (1049)
+.++..+++++|.+++.. .+..+++|++|++++|+|+ .++ .+..+++|++|++++|++++..+ +.++++|++|+
T Consensus 18 l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~ 91 (263)
T 1xeu_A 18 LANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELS 91 (263)
T ss_dssp HHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEE
T ss_pred HHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEE
Confidence 445555566666665322 4555666666666666665 333 45556666666666666654332 56666666666
Q ss_pred ecCcccccccCcccccccccccccccCCccCCCCccCcCCCcceeEeecccccccccccccccCCCcccEEEeecccccC
Q 039290 525 LGSNALTSIIPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALSGVIPVTIGGLQGLQLLSLRYNRLQG 604 (1049)
Q Consensus 525 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 604 (1049)
|++|+++++.+ .. . ++|++|++++|++++. +.+..+++|++|+|++|+|++. + .++.+++|+.|+|++|+|++
T Consensus 92 L~~N~l~~l~~-~~-~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~ 164 (263)
T 1xeu_A 92 VNRNRLKNLNG-IP-S-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITN 164 (263)
T ss_dssp CCSSCCSCCTT-CC-C-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCB
T ss_pred CCCCccCCcCc-cc-c-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcc
Confidence 66666655321 11 1 4455555555554432 2244444444444444444432 1 34444444444444444443
Q ss_pred CccccccCccCCcEEeccCcccc
Q 039290 605 PIPESFGGLKSLNFVDMSNNNLS 627 (1049)
Q Consensus 605 ~~~~~~~~l~~L~~L~Ls~N~l~ 627 (1049)
. ..+..+++|+.|++++|+++
T Consensus 165 ~--~~l~~l~~L~~L~l~~N~~~ 185 (263)
T 1xeu_A 165 T--GGLTRLKKVNWIDLTGQKCV 185 (263)
T ss_dssp C--TTSTTCCCCCEEEEEEEEEE
T ss_pred h--HHhccCCCCCEEeCCCCccc
Confidence 3 33444444444444444444
No 370
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.74 E-value=2.8e-18 Score=184.60 Aligned_cols=171 Identities=20% Similarity=0.282 Sum_probs=118.6
Q ss_pred CcchhhhhhcccCccccccCcccccccCCcEeccccCCccccCcccccccCCccEEEeCCCCccCCCcccccCCCcccEE
Q 039290 95 NLSFLAVLAIRNNSFFGSLPEELSHLRGLKYFDFRFNNFHIEIPSWFVSLPRLQHLLLKHNSFVGKIPETIGYLSLLQEL 174 (1049)
Q Consensus 95 ~l~~L~~L~l~~n~~~g~~p~~~~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 174 (1049)
++..+..+++++|.++ .++ .+..+++|++|++++|++. .+| .+..+++|++|+|++|.+++. |. ++.+++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~-~~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~-~~-l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVT-DLV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDL-SP-LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTT-SEE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCcc-ccc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCC-hh-hccCCCCCEE
Confidence 5778888899998887 455 6788899999999999887 566 688889999999999998854 44 8888999999
Q ss_pred cCCCccCccccCCCcccccccCCCCccceEEeeccccCCCCCCCcccccccceecccccccccccCCCCccccccceEEe
Q 039290 175 DLSDNQLSGTIPSSIFNISSCQNLPVLEGLFISYNQLTGPIPTNLWKCRELHVVSLAFNKFQGGIPRDIGNLTSVRNLFL 254 (1049)
Q Consensus 175 ~Ls~N~l~g~ip~~~~~l~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 254 (1049)
+|++|+++ .+|... . ++|++|++++|++++ +| .+..+++|+.|+|++|++++. | .++.+++|++|+|
T Consensus 91 ~L~~N~l~-~l~~~~-------~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L 157 (263)
T 1xeu_A 91 SVNRNRLK-NLNGIP-------S-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDL 157 (263)
T ss_dssp ECCSSCCS-CCTTCC-------C-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEEC
T ss_pred ECCCCccC-CcCccc-------c-CcccEEEccCCccCC-Ch-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEEC
Confidence 99999888 455422 1 457788888888775 22 355566666666666666543 2 4555566666666
Q ss_pred ccccccccCccccccccceEEEeeccccCCCc
Q 039290 255 GNNSLIGEIPNEIGNLRNLEVLGVQSSNLAGL 286 (1049)
Q Consensus 255 ~~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~ 286 (1049)
++|++++. ..+..+++|+.|++++|.+...
T Consensus 158 ~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 158 HGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp TTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred CCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 66666543 4455555555555555555443
No 371
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.73 E-value=1.7e-18 Score=176.86 Aligned_cols=131 Identities=21% Similarity=0.292 Sum_probs=80.1
Q ss_pred ceEEeeCcccCCcCchhccCcccCCceeecCcccccccCc-ccccccccccccccCCccCCCCccCcCCCcceeEeeccc
Q 039290 497 ANLYLGDNKLSGRLPACLGNLTSLRDLSLGSNALTSIIPS-TLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSL 575 (1049)
Q Consensus 497 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 575 (1049)
+.+++++|.++ .+|..+.. +|++|++++|+++++.+. .+..+++|++|+|++|+|++..|..|..+++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 66777777775 55654433 677777777777665553 356666666666666666665555666666666666666
Q ss_pred ccccccccccccCCCcccEEEeecccccCCccccccCccCCcEEeccCccccCCc
Q 039290 576 NALSGVIPVTIGGLQGLQLLSLRYNRLQGPIPESFGGLKSLNFVDMSNNNLSGTI 630 (1049)
Q Consensus 576 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 630 (1049)
|+|++..|..|.++++|+.|+|++|+|++.+|..|..+++|++|+|++|++++..
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 142 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNC 142 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcC
Confidence 6666555555555666666666666665555555555555666666665555443
No 372
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.73 E-value=6.1e-18 Score=173.70 Aligned_cols=153 Identities=17% Similarity=0.220 Sum_probs=76.2
Q ss_pred cCcCCCcceEeeccccCCCCCcccccccccceEEeeCcccCCcCchhccCcccCCceeecCcccccccCccccccccccc
Q 039290 467 GRLQKLQGLYLQNNKLEGSIPEDLCHLYRLANLYLGDNKLSGRLPACLGNLTSLRDLSLGSNALTSIIPSTLWNLKDILR 546 (1049)
Q Consensus 467 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 546 (1049)
+.+++|++|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|++++..|..+
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l-------- 108 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNL-------- 108 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCC--------
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhh--------
Confidence 34445555555555554 333 3444555555555555443 12244445555555555555544333334
Q ss_pred ccccCCccCCCCccCcCCCcceeEeecccccccccccccccCCCcccEEEeeccc-ccCCccccccCccCCcEEeccCcc
Q 039290 547 FNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALSGVIPVTIGGLQGLQLLSLRYNR-LQGPIPESFGGLKSLNFVDMSNNN 625 (1049)
Q Consensus 547 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~Ls~N~ 625 (1049)
+.+++|++|++++|++++..|..++.+++|+.|+|++|+ ++ .+| .+..+++|++|++++|+
T Consensus 109 ----------------~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~ 170 (197)
T 4ezg_A 109 ----------------SGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDG 170 (197)
T ss_dssp ----------------TTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBC
T ss_pred ----------------cCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCC
Confidence 444444444444444444445555555555556665555 44 233 45556666666666666
Q ss_pred ccCCcccccccccccceeeccCCccc
Q 039290 626 LSGTIPKSMEALSYLKHLNLSFNQLE 651 (1049)
Q Consensus 626 l~~~~p~~~~~l~~L~~l~l~~N~l~ 651 (1049)
+++ ++ .+..+++|++|++++|++.
T Consensus 171 i~~-~~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 171 VHD-YR-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp CCC-CT-TGGGCSSCCEEEECBC---
T ss_pred CcC-hH-HhccCCCCCEEEeeCcccC
Confidence 653 32 4555666666666666553
No 373
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.73 E-value=8.7e-18 Score=172.53 Aligned_cols=150 Identities=17% Similarity=0.239 Sum_probs=110.7
Q ss_pred CcccCCceeecCcccccccCcccccccccccccccCCccCCCCccCcCCCcceeEeecccccccccccccccCCCcccEE
Q 039290 516 NLTSLRDLSLGSNALTSIIPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALSGVIPVTIGGLQGLQLL 595 (1049)
Q Consensus 516 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 595 (1049)
.+++|+.|++++|.++. +| .+..+++|++|++++|.++ .++.+..+++|++|++++|++++..|..|+.+++|+.|
T Consensus 42 ~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L 117 (197)
T 4ezg_A 42 QMNSLTYITLANINVTD-LT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLL 117 (197)
T ss_dssp HHHTCCEEEEESSCCSC-CT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEE
T ss_pred hcCCccEEeccCCCccC-hH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEE
Confidence 34444444444444443 22 3444555555555555443 23457778888999999999988889999999999999
Q ss_pred EeecccccCCccccccCccCCcEEeccCcc-ccCCcccccccccccceeeccCCcccccCCCCCCccccccccccCCc
Q 039290 596 SLRYNRLQGPIPESFGGLKSLNFVDMSNNN-LSGTIPKSMEALSYLKHLNLSFNQLEGEIPTRGPFITFSAESFLGNQ 672 (1049)
Q Consensus 596 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 672 (1049)
+|++|++++..|..++.+++|++|+|++|+ ++ .+| .+..+++|+.|++++|++++. |.-..+..+....+.+|+
T Consensus 118 ~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~-~~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 118 DISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDY-RGIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp ECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCC-TTGGGCSSCCEEEECBC-
T ss_pred EecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcCh-HHhccCCCCCEEEeeCcc
Confidence 999999998899999999999999999998 65 666 699999999999999999873 333344455555666664
No 374
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.72 E-value=1.1e-18 Score=214.69 Aligned_cols=198 Identities=20% Similarity=0.235 Sum_probs=85.6
Q ss_pred cCCccccCCCCCCCCCCCccEEEccCCcccccCCccccCcCCCcceEeeccccCCCCCcccccccccceEEeeCcccCCc
Q 039290 430 ESCNISGGIPKELGNINNLTVIRLGNNELTGTIPVTLGRLQKLQGLYLQNNKLEGSIPEDLCHLYRLANLYLGDNKLSGR 509 (1049)
Q Consensus 430 ~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 509 (1049)
..|.+. ..|+.+..+++|+.|+|++|.+. .+|..+..+++|++|+|++|+|+ .+|..|+.+++|++|+|++|+|+ .
T Consensus 209 ~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~ 284 (727)
T 4b8c_D 209 IENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-S 284 (727)
T ss_dssp --------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-S
T ss_pred ccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-c
Confidence 334433 44556666667777777777766 45555556666777777777666 56666666666666666666666 5
Q ss_pred CchhccCcccCCceeecCcccccccCcccccccccccccccCCccCCCCccCcCCCcc-eeEeecccccccccccccccC
Q 039290 510 LPACLGNLTSLRDLSLGSNALTSIIPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKV-VIEMDLSLNALSGVIPVTIGG 588 (1049)
Q Consensus 510 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~ 588 (1049)
+|..|+++++|++|+|++|.|+. +|..|..+++|+.|+|++|.|++.+|..+..+.. +..++|++|.+++.+|.
T Consensus 285 lp~~~~~l~~L~~L~L~~N~l~~-lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~---- 359 (727)
T 4b8c_D 285 LPAELGSCFQLKYFYFFDNMVTT-LPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH---- 359 (727)
T ss_dssp CCSSGGGGTTCSEEECCSSCCCC-CCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC----
T ss_pred cChhhcCCCCCCEEECCCCCCCc-cChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc----
Confidence 56666666666666666666653 4555666666666666666655555544433221 12245555555544443
Q ss_pred CCcccEEEeecccccCCccccccCccCCcEEeccCccccCCcccccccccccceeeccCCcccccC
Q 039290 589 LQGLQLLSLRYNRLQGPIPESFGGLKSLNFVDMSNNNLSGTIPKSMEALSYLKHLNLSFNQLEGEI 654 (1049)
Q Consensus 589 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~ 654 (1049)
.|+.|++++|... -..+ +.|.+..+..+..+..+....+++|-+.+..
T Consensus 360 --~l~~l~l~~n~~~---~~~~-------------~~l~~~~~~~~~~l~~~~~~~ls~Nil~~~~ 407 (727)
T 4b8c_D 360 --ERRFIEINTDGEP---QREY-------------DSLQQSTEHLATDLAKRTFTVLSYNTLCQHY 407 (727)
T ss_dssp --C---------------------------------------------------------CCCGGG
T ss_pred --ccceeEeeccccc---cccc-------------CCccccccchhhcccccceeeeecccccccc
Confidence 2333444444100 0011 1333344444555666666777777765433
No 375
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.72 E-value=4.6e-18 Score=182.38 Aligned_cols=138 Identities=18% Similarity=0.201 Sum_probs=107.2
Q ss_pred CCCCCceecCCCcEEEEEEEe-CCCcE--EEEEEeecccCCC------------------------HHHHHHHHHHHhhc
Q 039290 762 GFSENKLLGMGSFGSVYKGVL-PDGME--IAAKVFHMEFDGS------------------------LESFHAECKVMGSI 814 (1049)
Q Consensus 762 ~~~~~~~lg~G~fg~Vy~a~~-~~~~~--vavK~~~~~~~~~------------------------~~~~~~e~~~l~~l 814 (1049)
-|.+.+.||+|+||.||+|.. .+|+. ||||+++...... ...+.+|++++.++
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 366788999999999999997 68889 9999975432110 13678899999999
Q ss_pred CCCce--eeEEeeeecCCeeEEEEeccCC-C----ChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCC
Q 039290 815 RHRNL--VKIISSCSNNDFKALVLEYMSN-G----SLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDI 887 (1049)
Q Consensus 815 ~hpni--v~l~~~~~~~~~~~lv~e~~~~-g----~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dl 887 (1049)
+|+++ +.++++ +..++||||+.+ | +|.+.... .++.++..++.|++.|++|||. +.||+||||
T Consensus 128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH~--~~givHrDl 197 (258)
T 1zth_A 128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRLYQ--EAELVHADL 197 (258)
T ss_dssp HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHHHH--TSCEECSSC
T ss_pred HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHHHH--HCCEEeCCC
Confidence 88754 344432 356899999942 3 66665432 2345678899999999999994 579999999
Q ss_pred CCCCeeecCCCceEEecccCceec
Q 039290 888 KPSNVLLNESMVGHLSDFGIAKIL 911 (1049)
Q Consensus 888 kp~NIl~~~~~~~kl~DfGla~~~ 911 (1049)
||+|||++. .++|+|||+|...
T Consensus 198 kp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 198 SEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp STTSEEESS--SEEECCCTTCEET
T ss_pred CHHHEEEcC--cEEEEECcccccC
Confidence 999999998 9999999999864
No 376
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.71 E-value=2.3e-17 Score=168.48 Aligned_cols=155 Identities=25% Similarity=0.342 Sum_probs=103.8
Q ss_pred CceeecCcccccccCcccccccccccccccCCccCCCCcc-CcCCCcceeEeecccccccccccccccCCCcccEEEeec
Q 039290 521 RDLSLGSNALTSIIPSTLWNLKDILRFNLSSNSLNGSLLP-DIGNLKVVIEMDLSLNALSGVIPVTIGGLQGLQLLSLRY 599 (1049)
Q Consensus 521 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 599 (1049)
+.+++++|+++. +|..+.. ++++|++++|++++..+. .++.+++|++|+|++|+|++..|..|.++++|+.|+|++
T Consensus 11 ~~l~~s~~~l~~-ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLKE-IPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCSS-CCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcCc-CccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 567777777765 4444432 677777777777765553 367777777777777777777777777777777777777
Q ss_pred ccccCCccccccCccCCcEEeccCccccCCcccccccccccceeeccCCcccccCCCCCCccccccccccCCccccCCC
Q 039290 600 NRLQGPIPESFGGLKSLNFVDMSNNNLSGTIPKSMEALSYLKHLNLSFNQLEGEIPTRGPFITFSAESFLGNQALCGSP 678 (1049)
Q Consensus 600 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~cg~~ 678 (1049)
|+|++..+..|.++++|++|+|++|+|++.+|..+..+++|++|++++|+|+|.++...-...+....+.++...|+.|
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P 166 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAP 166 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCC
Confidence 7777766777777777777777777777777777777777777777777777776642111112222344455556655
No 377
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.70 E-value=5.6e-18 Score=189.17 Aligned_cols=260 Identities=15% Similarity=0.111 Sum_probs=118.1
Q ss_pred ccceEEEeeccccCC--CccccccccccccceEEeccCccCCCCCCcccCC--------CCCccEEEcCCCCCCCCCCcc
Q 039290 270 LRNLEVLGVQSSNLA--GLIPASIFNISTLKELAVTDNDLLGSLPSSIDLG--------LPNLERLFLGENNFSGTIPSS 339 (1049)
Q Consensus 270 l~~L~~L~L~~n~l~--~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~--------l~~L~~L~L~~N~l~~~~p~~ 339 (1049)
+++|+.|||++|++. ...+.. ++.++.+.+..| .+|+..+.+ +++|+.|+|.+ .++...+.+
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~---~~~~~~~~~~~~----~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~a 119 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGT---YPNGKFYIYMAN----FVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAA 119 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSS---SGGGCCEEECTT----EECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTT
T ss_pred hccCeEEecCcceeEEecCcccc---cccccccccccc----ccCHHHhcccccccccccCCCcEEECCc-cccchhHHH
Confidence 455666666666655 111111 112334444444 345555555 67777777776 666555566
Q ss_pred ccCCCCCceeecccCccccCcccccccccccceeecccccc----cCCCCCcccccccccCCCCc-EEEccCCccccCCC
Q 039290 340 LTNISELSVLDFGFNSFSGLIPTTFGNLRSLKLLSLAGNVL----TSPTPDLSFLSSLTSCRNLE-IIYLSENPINGILP 414 (1049)
Q Consensus 340 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l----~~~~~~~~~l~~l~~l~~L~-~L~Ls~N~i~~~~p 414 (1049)
|.++++|+.+++++|.+..+.+..|.++.++..+.+..+.. ..+.. .+|..+..|+ .+.+.... .++
T Consensus 120 F~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~-----~~f~~~~~L~~~i~~~~~~---~l~ 191 (329)
T 3sb4_A 120 FKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEH-----FAFIEGEPLETTIQVGAMG---KLE 191 (329)
T ss_dssp TTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTT-----SCEEESCCCEEEEEECTTC---CHH
T ss_pred hhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccc-----cccccccccceeEEecCCC---cHH
Confidence 77777777777777777666666677666666666555322 11111 1244455555 33333211 011
Q ss_pred Cccccc---cccccEEEccCCccccCCCCCCCCCCCccEEEccCCcccccCCccccCcCCCcceEeeccccCCCCCcccc
Q 039290 415 SSIGNF---SISMKSLSMESCNISGGIPKELGNINNLTVIRLGNNELTGTIPVTLGRLQKLQGLYLQNNKLEGSIPEDLC 491 (1049)
Q Consensus 415 ~~~~~~---~~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 491 (1049)
..+... ..++..+.+.++-...........+++|+.|+|++|+++.+.+.+|.++++|+.|+|.+| ++...+..|.
T Consensus 192 ~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~ 270 (329)
T 3sb4_A 192 DEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFS 270 (329)
T ss_dssp HHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTT
T ss_pred HHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhh
Confidence 111000 112233333222110000000011344555555555555444444555555555555544 4433334444
Q ss_pred cccccc-eEEeeCcccCCcCchhccCcccCCceeecCcccccccCcccccccccccc
Q 039290 492 HLYRLA-NLYLGDNKLSGRLPACLGNLTSLRDLSLGSNALTSIIPSTLWNLKDILRF 547 (1049)
Q Consensus 492 ~l~~L~-~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 547 (1049)
++.+|+ .+++.+ .++.+.+.+|.++++|+.+++++|+++.+.+.+|.++++|+.+
T Consensus 271 ~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~l 326 (329)
T 3sb4_A 271 NCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLI 326 (329)
T ss_dssp TCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEE
T ss_pred CChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhh
Confidence 444444 444444 3333334444444444444444444444444444444444433
No 378
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.67 E-value=1.4e-17 Score=185.89 Aligned_cols=101 Identities=13% Similarity=0.102 Sum_probs=50.2
Q ss_pred cccccccccCCccCCCCccCcCCCcceeEeecccccccccccccccCCCccc-EEEeecccccCCccccccCccCCcEEe
Q 039290 542 KDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALSGVIPVTIGGLQGLQ-LLSLRYNRLQGPIPESFGGLKSLNFVD 620 (1049)
Q Consensus 542 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 620 (1049)
++|+.++|++|+++.....+|.++.+|++++|++| ++.+.+.+|.++.+|+ .+++.+ +++.+.+.+|.++++|+.|+
T Consensus 226 ~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~ 303 (329)
T 3sb4_A 226 PNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVL 303 (329)
T ss_dssp TTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEE
T ss_pred CCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEE
Confidence 34444444444444433444444444455555444 4444444555555555 555555 44444445555555555555
Q ss_pred ccCccccCCcccccccccccceee
Q 039290 621 MSNNNLSGTIPKSMEALSYLKHLN 644 (1049)
Q Consensus 621 Ls~N~l~~~~p~~~~~l~~L~~l~ 644 (1049)
+++|+++...+..|.++++|+.++
T Consensus 304 l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 304 ATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp ECSSCCCEECTTTTCTTCCCCEEE
T ss_pred eCCCccCccchhhhcCCcchhhhc
Confidence 555555533344555555555544
No 379
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.66 E-value=6.9e-17 Score=164.79 Aligned_cols=131 Identities=27% Similarity=0.389 Sum_probs=93.3
Q ss_pred ceeecCcccccccCcccccccccccccccCCccCCCCccCcCCCcceeEeecccccccccccccccCCCcccEEEeeccc
Q 039290 522 DLSLGSNALTSIIPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALSGVIPVTIGGLQGLQLLSLRYNR 601 (1049)
Q Consensus 522 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 601 (1049)
.+++++|.++. +|..+. ++|++|++++|.|+ .+|..|..+++|++|+|++|+|++..+..|.++++|+.|+|++|+
T Consensus 14 ~l~~~~~~l~~-ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLKV-LPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCSS-CCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCCc-CCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 34444444443 232221 34555666666665 344566667777777777777777777778888888888888888
Q ss_pred ccCCccccccCccCCcEEeccCccccCCcccccccccccceeeccCCcccccCCC
Q 039290 602 LQGPIPESFGGLKSLNFVDMSNNNLSGTIPKSMEALSYLKHLNLSFNQLEGEIPT 656 (1049)
Q Consensus 602 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~ 656 (1049)
|++..|..|.++++|++|+|++|+|++..+..+..+++|+.|++++|+|.|.+..
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~l 144 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNM 144 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGGG
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCcC
Confidence 8877778888888888888888888865556688888888888888888887753
No 380
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.62 E-value=6.8e-16 Score=153.92 Aligned_cols=133 Identities=19% Similarity=0.187 Sum_probs=98.7
Q ss_pred ccCCceeecCcccc-cccCcccccccccccccccCCccCCCCccCcCCCcceeEeecccccccccccccccCCCcccEEE
Q 039290 518 TSLRDLSLGSNALT-SIIPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALSGVIPVTIGGLQGLQLLS 596 (1049)
Q Consensus 518 ~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 596 (1049)
++|+.|++++|+++ +.+|..+..+++|++|++++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|+.|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 45666666666665 44565666666666666666666654 6677777888888888888876777777788888888
Q ss_pred eecccccCCc-cccccCccCCcEEeccCccccCCcc---cccccccccceeeccCCcccc
Q 039290 597 LRYNRLQGPI-PESFGGLKSLNFVDMSNNNLSGTIP---KSMEALSYLKHLNLSFNQLEG 652 (1049)
Q Consensus 597 Ls~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~l~l~~N~l~~ 652 (1049)
|++|+|++.. +..+..+++|++|++++|++++..+ ..+..+++|++|++++|.+..
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 161 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQE 161 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCB
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhh
Confidence 8888888643 2778888888888888888885544 478888888888888888754
No 381
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.62 E-value=4.5e-16 Score=155.23 Aligned_cols=136 Identities=23% Similarity=0.229 Sum_probs=88.1
Q ss_pred CCCcceEeeccccC-CCCCcccccccccceEEeeCcccCCcCchhccCcccCCceeecCcccccccCccccccccccccc
Q 039290 470 QKLQGLYLQNNKLE-GSIPEDLCHLYRLANLYLGDNKLSGRLPACLGNLTSLRDLSLGSNALTSIIPSTLWNLKDILRFN 548 (1049)
Q Consensus 470 ~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 548 (1049)
++|++|++++|+++ +.+|..+..+++|+.|++++|.+++. ..+..+++|++|++++|++++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 56777777777776 55666666777777777777776643 5566666666666666666665555554455555555
Q ss_pred ccCCccCCCCccCcCCCcceeEeecccccccccc-cccccCCCcccEEEeecccccCCcc---ccccCccCCcEEeccCc
Q 039290 549 LSSNSLNGSLLPDIGNLKVVIEMDLSLNALSGVI-PVTIGGLQGLQLLSLRYNRLQGPIP---ESFGGLKSLNFVDMSNN 624 (1049)
Q Consensus 549 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~~---~~~~~l~~L~~L~Ls~N 624 (1049)
+++|.+ ++.. +..+..+++|+.|++++|++++..+ ..|..+++|++||+++|
T Consensus 102 Ls~N~l------------------------~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n 157 (168)
T 2ell_A 102 LSGNKL------------------------KDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDR 157 (168)
T ss_dssp CBSSSC------------------------CSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEET
T ss_pred ccCCcc------------------------CcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCC
Confidence 555544 4332 2566677777777777777775544 47777788888888888
Q ss_pred cccCCccc
Q 039290 625 NLSGTIPK 632 (1049)
Q Consensus 625 ~l~~~~p~ 632 (1049)
.+. .+|.
T Consensus 158 ~~~-~~~~ 164 (168)
T 2ell_A 158 EDQ-EAPD 164 (168)
T ss_dssp TSC-BCCS
T ss_pred Chh-hccc
Confidence 776 4444
No 382
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.62 E-value=3.4e-16 Score=173.38 Aligned_cols=145 Identities=14% Similarity=0.148 Sum_probs=104.1
Q ss_pred HHHHHHhcCCCCCceecCCCcEEEEEEEeCCCcEEEEEEeecccC--------------CCHHH--------HHHHHHHH
Q 039290 754 QDLLRATDGFSENKLLGMGSFGSVYKGVLPDGMEIAAKVFHMEFD--------------GSLES--------FHAECKVM 811 (1049)
Q Consensus 754 ~~~~~~~~~~~~~~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~~--------------~~~~~--------~~~e~~~l 811 (1049)
..+.....-|++.+.||+|+||.||+|...+|+.||||+++.... ..... ..+|...+
T Consensus 88 ~~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL 167 (397)
T 4gyi_A 88 HTHAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFM 167 (397)
T ss_dssp HHHHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHH
Confidence 334443345899999999999999999998999999999754210 01111 23455666
Q ss_pred hhcCCCcee--eEEeeeecCCeeEEEEeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCC
Q 039290 812 GSIRHRNLV--KIISSCSNNDFKALVLEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKP 889 (1049)
Q Consensus 812 ~~l~hpniv--~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp 889 (1049)
.++.+.++. ..+++ ...++||||++|++|.++... .....++.|++.++.++| +.|||||||||
T Consensus 168 ~rL~~~gv~vp~p~~~----~~~~LVME~i~G~~L~~l~~~-------~~~~~l~~qll~~l~~lH---~~gIVHrDLKp 233 (397)
T 4gyi_A 168 KALYEEGFPVPEPIAQ----SRHTIVMSLVDALPMRQVSSV-------PDPASLYADLIALILRLA---KHGLIHGDFNE 233 (397)
T ss_dssp HHHHHTTCSCCCEEEE----ETTEEEEECCSCEEGGGCCCC-------SCHHHHHHHHHHHHHHHH---HTTEECSCCST
T ss_pred HHHHhcCCCCCeeeec----cCceEEEEecCCccHhhhccc-------HHHHHHHHHHHHHHHHHH---HCCCcCCCCCH
Confidence 666443332 22221 123799999999888765322 234568899999999999 89999999999
Q ss_pred CCeeecCCC----------ceEEecccCceecC
Q 039290 890 SNVLLNESM----------VGHLSDFGIAKILG 912 (1049)
Q Consensus 890 ~NIl~~~~~----------~~kl~DfGla~~~~ 912 (1049)
.|||+++++ .+.|+||+-+....
T Consensus 234 ~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 234 FNILIREEKDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp TSEEEEEEECSSCTTSEEEEEEECCCTTCEETT
T ss_pred HHEEEeCCCCcccccccccceEEEEeCCcccCC
Confidence 999998766 38999999887543
No 383
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.61 E-value=1.2e-15 Score=153.58 Aligned_cols=113 Identities=23% Similarity=0.270 Sum_probs=70.5
Q ss_pred ccccccccCCccCCCCccCcCCCcceeEeecccccccccccccccCCCcccEEEeecccccCCccccccCccCCcEEecc
Q 039290 543 DILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALSGVIPVTIGGLQGLQLLSLRYNRLQGPIPESFGGLKSLNFVDMS 622 (1049)
Q Consensus 543 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 622 (1049)
+|+.|++++|++++..+..+..+++|++|++++|+|++..+..|+.+++|+.|+|++|+|++..+..|.++++|++|+|+
T Consensus 29 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 108 (177)
T 2o6r_A 29 SATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALD 108 (177)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECc
Confidence 44444444444444444445555555556666666655555556666677777777777776666666677777777777
Q ss_pred CccccCCcccccccccccceeeccCCcccccCC
Q 039290 623 NNNLSGTIPKSMEALSYLKHLNLSFNQLEGEIP 655 (1049)
Q Consensus 623 ~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p 655 (1049)
+|++++..+..+..+++|++|++++|++.|.+|
T Consensus 109 ~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 109 TNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 777765444455667777777777777777665
No 384
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.60 E-value=7.7e-16 Score=150.13 Aligned_cols=128 Identities=17% Similarity=0.199 Sum_probs=98.3
Q ss_pred ccCCceeecCcccc-cccCcccccccccccccccCCccCCCCccCcCCCcceeEeecccccccccccccccCCCcccEEE
Q 039290 518 TSLRDLSLGSNALT-SIIPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALSGVIPVTIGGLQGLQLLS 596 (1049)
Q Consensus 518 ~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 596 (1049)
++|+.|++++|.++ +.+|..+..+++|++|++++|.+++. ..++.+++|++|++++|++++.+|..+..+++|+.|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 55666666666666 45666666677777777777777654 6677778888888888888877788888888899999
Q ss_pred eecccccCC-ccccccCccCCcEEeccCccccCCcc---cccccccccceeeccC
Q 039290 597 LRYNRLQGP-IPESFGGLKSLNFVDMSNNNLSGTIP---KSMEALSYLKHLNLSF 647 (1049)
Q Consensus 597 Ls~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~l~l~~ 647 (1049)
+++|++++. .+..++.+++|++|++++|++++..+ ..+..+++|+.|++++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 999988864 34788888999999999999986655 4788888899888863
No 385
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.58 E-value=4e-15 Score=149.76 Aligned_cols=133 Identities=22% Similarity=0.225 Sum_probs=104.0
Q ss_pred cceEEeeCcccCCcCchhccCcccCCceeecCcccccccCcccccccccccccccCCccCCCCccCcCCCcceeEeeccc
Q 039290 496 LANLYLGDNKLSGRLPACLGNLTSLRDLSLGSNALTSIIPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSL 575 (1049)
Q Consensus 496 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 575 (1049)
.+.+++++|.++ .+|..+ .++|+.|++++|+++++.+..+..+++|++|++++|++++..+..+..+++|++|++++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 456666666665 344333 25677777777777776666677777777777777777776666678888888888888
Q ss_pred ccccccccccccCCCcccEEEeecccccCCccccccCccCCcEEeccCccccCCcc
Q 039290 576 NALSGVIPVTIGGLQGLQLLSLRYNRLQGPIPESFGGLKSLNFVDMSNNNLSGTIP 631 (1049)
Q Consensus 576 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 631 (1049)
|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|++|+|++|++++..|
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 88887777788899999999999999997777778999999999999999997665
No 386
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.58 E-value=3.6e-15 Score=152.00 Aligned_cols=129 Identities=26% Similarity=0.362 Sum_probs=94.9
Q ss_pred ceEEeeCcccCCcCchhccCcccCCceeecCcccccccCcccccccccccccccCCccCCCCccCcCCCcceeEeecccc
Q 039290 497 ANLYLGDNKLSGRLPACLGNLTSLRDLSLGSNALTSIIPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLN 576 (1049)
Q Consensus 497 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 576 (1049)
+.+++++|.++ .+|..+. ++|++|+|++|+++. +|..|..+++|++|+|++|.|++..+..|..+++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~~-ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFTL-VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCCS-CCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCch-hHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 34555555555 3443332 356666666666653 4456666666666777777776666667777788888888888
Q ss_pred cccccccccccCCCcccEEEeecccccCCccccccCccCCcEEeccCccccCC
Q 039290 577 ALSGVIPVTIGGLQGLQLLSLRYNRLQGPIPESFGGLKSLNFVDMSNNNLSGT 629 (1049)
Q Consensus 577 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 629 (1049)
+|++..|..|.++++|+.|+|++|+|+...+..|..+++|+.|+|++|++.+.
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecC
Confidence 88878788899999999999999999977777899999999999999999753
No 387
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.58 E-value=1.5e-14 Score=164.86 Aligned_cols=264 Identities=11% Similarity=0.113 Sum_probs=166.7
Q ss_pred CCCceeecccCccccCcccccccccccceeecccccccCCCCCcccccccccCCCCcEEEccCCccccCCCCcccccccc
Q 039290 344 SELSVLDFGFNSFSGLIPTTFGNLRSLKLLSLAGNVLTSPTPDLSFLSSLTSCRNLEIIYLSENPINGILPSSIGNFSIS 423 (1049)
Q Consensus 344 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~~~~~ 423 (1049)
..++.+.+.+ .++.+...+|.+. +|+.+.+..| ++.+... +|.++ +|+.+.+.+
T Consensus 113 ~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~-----aF~~~-~L~~i~lp~----------------- 166 (401)
T 4fdw_A 113 KGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDM-----AFFNS-TVQEIVFPS----------------- 166 (401)
T ss_dssp SSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTT-----TTTTC-CCCEEECCT-----------------
T ss_pred CCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHH-----hcCCC-CceEEEeCC-----------------
Confidence 3444454433 3444445566663 5777776655 5544433 23332 355554443
Q ss_pred ccEEEccCCccccCCCCCCCCCCCccEEEccCCcccccCCccccCcCCCcceEeeccccCCCCCcccccccccceEEeeC
Q 039290 424 MKSLSMESCNISGGIPKELGNINNLTVIRLGNNELTGTIPVTLGRLQKLQGLYLQNNKLEGSIPEDLCHLYRLANLYLGD 503 (1049)
Q Consensus 424 L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 503 (1049)
.+....+.+|.++++|+.++|++|+++.....+|. ..+|+.+.|..+ ++......|.++++|+.+++.+
T Consensus 167 ---------~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~ 235 (401)
T 4fdw_A 167 ---------TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPE 235 (401)
T ss_dssp ---------TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCT
T ss_pred ---------CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCC
Confidence 33334445566666666666666666654445555 466666666633 5545555666666677777665
Q ss_pred cccCCcCchhccCcccCCceeecCcccccccCcccccccccccccccCCccC-----CCCccCcCCCcceeEeecccccc
Q 039290 504 NKLSGRLPACLGNLTSLRDLSLGSNALTSIIPSTLWNLKDILRFNLSSNSLN-----GSLLPDIGNLKVVIEMDLSLNAL 578 (1049)
Q Consensus 504 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-----~~~~~~~~~l~~L~~L~Ls~N~l 578 (1049)
| ++.....+|.+ .+|+.+.+ .+.++.+...+|.++++|+.+++.+|.+. ......|.++.+|+.++|. |.+
T Consensus 236 ~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i 311 (401)
T 4fdw_A 236 N-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESI 311 (401)
T ss_dssp T-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTC
T ss_pred C-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-Cce
Confidence 4 44345556666 56777777 44566666667777777777777666554 3445677778888888887 447
Q ss_pred cccccccccCCCcccEEEeecccccCCccccccCccCCcEEeccCccccCCccccccccc-ccceeeccCCcc
Q 039290 579 SGVIPVTIGGLQGLQLLSLRYNRLQGPIPESFGGLKSLNFVDMSNNNLSGTIPKSMEALS-YLKHLNLSFNQL 650 (1049)
Q Consensus 579 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~l~l~~N~l 650 (1049)
+.+...+|.++.+|+.++|..| ++.+.+.+|.++ +|+.+++++|.+....+..|..++ ++..|++..|.+
T Consensus 312 ~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 312 RILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESV 382 (401)
T ss_dssp CEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGH
T ss_pred EEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHH
Confidence 7666778888888888888555 665667788888 888888888888765566677774 677787777654
No 388
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.58 E-value=3.7e-14 Score=161.47 Aligned_cols=247 Identities=12% Similarity=0.161 Sum_probs=135.1
Q ss_pred CCceeecccCccccCcccccccccccceeecccccccCCCCCcccccccccCCCCcEEEccCCccccCCCCccccccccc
Q 039290 345 ELSVLDFGFNSFSGLIPTTFGNLRSLKLLSLAGNVLTSPTPDLSFLSSLTSCRNLEIIYLSENPINGILPSSIGNFSISM 424 (1049)
Q Consensus 345 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~~~~~L 424 (1049)
+|+.+++..| +..+...+|.+ .+|+.+.+.. .++.+... +|.+|++|+.+++++|.++.+....|. . .+|
T Consensus 136 ~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~-----aF~~c~~L~~l~l~~n~l~~I~~~aF~-~-~~L 205 (401)
T 4fdw_A 136 QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKED-----IFYYCYNLKKADLSKTKITKLPASTFV-Y-AGI 205 (401)
T ss_dssp CCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSS-----TTTTCTTCCEEECTTSCCSEECTTTTT-T-CCC
T ss_pred CccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHH-----HhhCcccCCeeecCCCcceEechhhEe-e-ccc
Confidence 3444444433 33333444444 2455555543 33333332 355555555555555555533333332 1 244
Q ss_pred cEEEccCCccccCCCCCCCCCCCccEEEccCCcccccCCccccCcCCCcceEeeccccCCCCCcccccccccceEEeeCc
Q 039290 425 KSLSMESCNISGGIPKELGNINNLTVIRLGNNELTGTIPVTLGRLQKLQGLYLQNNKLEGSIPEDLCHLYRLANLYLGDN 504 (1049)
Q Consensus 425 ~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 504 (1049)
+.+.+..+ +......+|.++++|+.+++.+| ++.+...+|.+ .+|+.+.+ .|.++......|.++++|+.+++.+|
T Consensus 206 ~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~ 281 (401)
T 4fdw_A 206 EEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGS 281 (401)
T ss_dssp SEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESS
T ss_pred CEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCc
Confidence 55555422 44444555666666666666653 44344455555 55666666 33344344445555555555555555
Q ss_pred ccCCcCchhccCcccCCceeecCcccccccCcccccccccccccccCCccCCCCccCcCCCcceeEeecccccccccccc
Q 039290 505 KLSGRLPACLGNLTSLRDLSLGSNALTSIIPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALSGVIPV 584 (1049)
Q Consensus 505 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 584 (1049)
.+. .+.+..+.+.+|.++++|+.+++. +.++.....+|.++.+|+.++|..| ++.+.+.
T Consensus 282 ~~~-------------------~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~ 340 (401)
T 4fdw_A 282 TFN-------------------DDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFS 340 (401)
T ss_dssp CCC-------------------CCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTT
T ss_pred ccc-------------------CCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHH
Confidence 443 000113444555555566666665 3355445556666677777777444 5556667
Q ss_pred cccCCCcccEEEeecccccCCccccccCcc-CCcEEeccCcccc
Q 039290 585 TIGGLQGLQLLSLRYNRLQGPIPESFGGLK-SLNFVDMSNNNLS 627 (1049)
Q Consensus 585 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~ 627 (1049)
+|.++ +|+.+++++|.+....+..|.+++ +++.|++..|.+.
T Consensus 341 aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 341 AFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp SSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred hCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 78888 888888888887766777787774 6778888777654
No 389
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.56 E-value=3.2e-15 Score=145.77 Aligned_cols=126 Identities=21% Similarity=0.248 Sum_probs=90.2
Q ss_pred cccEEEccCCccc-cCCCCCCCCCCCccEEEccCCcccccCCccccCcCCCcceEeeccccCCCCCcccccccccceEEe
Q 039290 423 SMKSLSMESCNIS-GGIPKELGNINNLTVIRLGNNELTGTIPVTLGRLQKLQGLYLQNNKLEGSIPEDLCHLYRLANLYL 501 (1049)
Q Consensus 423 ~L~~L~L~~n~i~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 501 (1049)
+++.|++++|.++ +.+|..+..+++|++|++++|.+++. ..++.+++|++|+|++|++++.+|..+..+++|++|++
T Consensus 18 ~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l 95 (149)
T 2je0_A 18 DVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNL 95 (149)
T ss_dssp GCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEEC
T ss_pred cCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEEC
Confidence 5666666666666 56667777777888888888887754 66777777888888888777667776777777777777
Q ss_pred eCcccCCc-CchhccCcccCCceeecCcccccccC---ccccccccccccccc
Q 039290 502 GDNKLSGR-LPACLGNLTSLRDLSLGSNALTSIIP---STLWNLKDILRFNLS 550 (1049)
Q Consensus 502 ~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~Ls 550 (1049)
++|++++. .+..++.+++|++|++++|++++..+ ..+..+++|+.|+++
T Consensus 96 s~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 96 SGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp TTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 77777753 23667777777777777777776554 456667777776665
No 390
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.55 E-value=6.3e-17 Score=166.25 Aligned_cols=137 Identities=23% Similarity=0.296 Sum_probs=71.0
Q ss_pred cccccCCcEeccccCCccccCcc------cccccCCccEEEeCCCCccCCCcccccCCCcccEEcCCCccCccccCCCcc
Q 039290 117 LSHLRGLKYFDFRFNNFHIEIPS------WFVSLPRLQHLLLKHNSFVGKIPETIGYLSLLQELDLSDNQLSGTIPSSIF 190 (1049)
Q Consensus 117 ~~~L~~L~~L~l~~n~~~~~~p~------~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~ 190 (1049)
+.....++.++++.+++.|.+|. .|..+++|++|+|++|.+++ +| .++.+++|++|+|++|+++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 33445555666666666655554 56666666666666666653 55 5566666666666666665 4554332
Q ss_pred cccccCCCCccceEEeeccccCCCCCCCcccccccceecccccccccccC-CCCccccccceEEeccccccccCc
Q 039290 191 NISSCQNLPVLEGLFISYNQLTGPIPTNLWKCRELHVVSLAFNKFQGGIP-RDIGNLTSVRNLFLGNNSLIGEIP 264 (1049)
Q Consensus 191 ~l~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p 264 (1049)
. +++|++|++++|++++ +| .+..+++|++|++++|++++..+ ..+..+++|++|++++|.+++.+|
T Consensus 91 ~------~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~ 157 (198)
T 1ds9_A 91 V------ADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYK 157 (198)
T ss_dssp H------HHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHH
T ss_pred c------CCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccc
Confidence 2 2335555555555553 22 34444445555555554442211 234445555555555555544433
No 391
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.54 E-value=1.2e-16 Score=164.11 Aligned_cols=155 Identities=21% Similarity=0.280 Sum_probs=95.1
Q ss_pred ccCcCCCcceEeeccccCCCCCc------ccccccccceEEeeCcccCCcCchhccCcccCCceeecCcccccccCcccc
Q 039290 466 LGRLQKLQGLYLQNNKLEGSIPE------DLCHLYRLANLYLGDNKLSGRLPACLGNLTSLRDLSLGSNALTSIIPSTLW 539 (1049)
Q Consensus 466 ~~~l~~L~~L~L~~N~l~~~~~~------~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 539 (1049)
+.....++.++++.|.+.+.+|. .+..+++|++|++++|.+++ +| .+.++++|++|++++|+++.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~~------- 84 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIKK------- 84 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEECS-------
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCccc-------
Confidence 44556777777777777766554 45555555555555555543 33 44444455555555544442
Q ss_pred cccccccccccCCccCCCCccCcCCCcceeEeecccccccccccccccCCCcccEEEeecccccCCcc-ccccCccCCcE
Q 039290 540 NLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALSGVIPVTIGGLQGLQLLSLRYNRLQGPIP-ESFGGLKSLNF 618 (1049)
Q Consensus 540 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~ 618 (1049)
+|..+..+++|++|++++|++++ +| .+..+++|+.|+|++|+|++..+ ..+..+++|++
T Consensus 85 ------------------l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~ 144 (198)
T 1ds9_A 85 ------------------IENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLED 144 (198)
T ss_dssp ------------------CSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSE
T ss_pred ------------------ccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCE
Confidence 33344445566666666666664 33 56677777777777777775332 46777788888
Q ss_pred EeccCccccCCcccc----------cccccccceeeccCCccc
Q 039290 619 VDMSNNNLSGTIPKS----------MEALSYLKHLNLSFNQLE 651 (1049)
Q Consensus 619 L~Ls~N~l~~~~p~~----------~~~l~~L~~l~l~~N~l~ 651 (1049)
|++++|++++.+|.. +..+++|+.|| +|+++
T Consensus 145 L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 145 LLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp EEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred EEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 888888877665542 67777888776 66654
No 392
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.53 E-value=2e-13 Score=156.17 Aligned_cols=310 Identities=14% Similarity=0.079 Sum_probs=135.4
Q ss_pred CCCccccccceEEeccccccccCccccccccceEEEeeccccCCCccccccccccccceEEeccCccCCCCCCcccCCCC
Q 039290 241 RDIGNLTSVRNLFLGNNSLIGEIPNEIGNLRNLEVLGVQSSNLAGLIPASIFNISTLKELAVTDNDLLGSLPSSIDLGLP 320 (1049)
Q Consensus 241 ~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~l~ 320 (1049)
.+|.++++|+.+.|..+ ++..-..+|.++++|+.+++..+ +...-..+|.++++|+.+.+..+ +. .+....+.+..
T Consensus 65 ~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~-~i~~~aF~~~~ 140 (394)
T 4fs7_A 65 AAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LK-SIGVEAFKGCD 140 (394)
T ss_dssp TTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CC-EECTTTTTTCC
T ss_pred HHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-ee-eecceeeeccc
Confidence 34555555555555432 44333445555566666555432 33333345555555555554433 11 23333333333
Q ss_pred CccEEEcCCCCCCCCCCccccCCCCCceeecccCccccCcccccccccccceeecccccccCCCCCcccccccccCCCCc
Q 039290 321 NLERLFLGENNFSGTIPSSLTNISELSVLDFGFNSFSGLIPTTFGNLRSLKLLSLAGNVLTSPTPDLSFLSSLTSCRNLE 400 (1049)
Q Consensus 321 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~l~~l~~L~ 400 (1049)
.++....... ...-...|.++++|+.+.+..+- ..+....|.++.+|+.+.+..| ++.+... +|.++..|+
T Consensus 141 ~~~~~~~~~~--~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~-----~F~~~~~L~ 211 (394)
T 4fs7_A 141 FKEITIPEGV--TVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDY-----CFAECILLE 211 (394)
T ss_dssp CSEEECCTTC--CEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTT-----TTTTCTTCC
T ss_pred ccccccCccc--cccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCch-----hhccccccc
Confidence 2222222221 11234456666777777765443 2244556666677777766654 3333322 355556665
Q ss_pred EEEccCCccccCCCCccccccccccEEEccCCccccCCCCCCCCCCCccEEEccCCcccccCCccccCcCCCcceEeecc
Q 039290 401 IIYLSENPINGILPSSIGNFSISMKSLSMESCNISGGIPKELGNINNLTVIRLGNNELTGTIPVTLGRLQKLQGLYLQNN 480 (1049)
Q Consensus 401 ~L~Ls~N~i~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 480 (1049)
.+.+..+... +.+......+|+.+.+..+ ++......|..+.+|+.+.+..+
T Consensus 212 ~i~~~~~~~~---------------------------i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~ 263 (394)
T 4fs7_A 212 NMEFPNSLYY---------------------------LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNN 263 (394)
T ss_dssp BCCCCTTCCE---------------------------ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCT
T ss_pred eeecCCCceE---------------------------eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCC
Confidence 5554443321 1111222233444444322 12223334444445555554444
Q ss_pred ccCCCCCcccccccccceEEeeCcccCCcCchhccCcccCCceeecCcccccccCcccccccccccccccCCccCCCCcc
Q 039290 481 KLEGSIPEDLCHLYRLANLYLGDNKLSGRLPACLGNLTSLRDLSLGSNALTSIIPSTLWNLKDILRFNLSSNSLNGSLLP 560 (1049)
Q Consensus 481 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~ 560 (1049)
... .....|..+..++.+....+.+. ..+|..+.+|+.+.+.++ ++.+...+|.++.+|+.+++.++ ++.....
T Consensus 264 ~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~ 337 (394)
T 4fs7_A 264 KLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKR 337 (394)
T ss_dssp TCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTT
T ss_pred cce-eeccccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHH
Confidence 322 33334444444444444433321 233444555555554432 33333344444444444444322 2222233
Q ss_pred CcCCCcceeEeecccccccccccccccCCCcccEEEee
Q 039290 561 DIGNLKVVIEMDLSLNALSGVIPVTIGGLQGLQLLSLR 598 (1049)
Q Consensus 561 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 598 (1049)
+|.++.+|+.+++..| ++.+...+|.++.+|+.+++.
T Consensus 338 aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp 374 (394)
T 4fs7_A 338 SFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELP 374 (394)
T ss_dssp TTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEE
T ss_pred hccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEEC
Confidence 3334444444444333 332333344444444444443
No 393
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.52 E-value=6.7e-15 Score=147.86 Aligned_cols=133 Identities=17% Similarity=0.184 Sum_probs=92.6
Q ss_pred ccCcccCCceeecCcccccccCcccccc-cccccccccCCccCCCCccCcCCCcceeEeecccccccccccccccCCCcc
Q 039290 514 LGNLTSLRDLSLGSNALTSIIPSTLWNL-KDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALSGVIPVTIGGLQGL 592 (1049)
Q Consensus 514 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 592 (1049)
+.++.+|+.|++++|+++.+ |. +..+ ++|++|++++|.+++. +.+..+++|++|+|++|+|++..+..|+.+++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~~i-~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPVI-EN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EECTTSCEEEECTTSCCCSC-CC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred cCCcCCceEEEeeCCCCchh-HH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 33445555555555555542 32 2232 2566666666666543 456677777788888888876655556888888
Q ss_pred cEEEeecccccCCccc--cccCccCCcEEeccCccccCCcccc----cccccccceeeccCCcccc
Q 039290 593 QLLSLRYNRLQGPIPE--SFGGLKSLNFVDMSNNNLSGTIPKS----MEALSYLKHLNLSFNQLEG 652 (1049)
Q Consensus 593 ~~L~Ls~N~l~~~~~~--~~~~l~~L~~L~Ls~N~l~~~~p~~----~~~l~~L~~l~l~~N~l~~ 652 (1049)
+.|+|++|+|+ .+|. .+..+++|++|++++|+++ .+|.. +..+++|+.||+++|....
T Consensus 91 ~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 91 TELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp CEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred CEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 88888888887 4554 7888888999999999987 55654 8888899999998887653
No 394
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.49 E-value=3.7e-13 Score=154.04 Aligned_cols=335 Identities=12% Similarity=0.102 Sum_probs=179.9
Q ss_pred ccccCccccccccceEEEeeccccCCCccccccccccccceEEeccCccCCCCCCcccCCCCCccEEEcCCCCCCCCCCc
Q 039290 259 LIGEIPNEIGNLRNLEVLGVQSSNLAGLIPASIFNISTLKELAVTDNDLLGSLPSSIDLGLPNLERLFLGENNFSGTIPS 338 (1049)
Q Consensus 259 l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~p~ 338 (1049)
++..-..+|.++++|+.+.+.. +++..-..+|.++++|+.+++.++ +. .++...+.++.+|+.+.+..+ +...-..
T Consensus 59 VtsIg~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~c~~L~~i~~p~~-l~~i~~~ 134 (394)
T 4fs7_A 59 VVSIGYAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VK-MIGRCTFSGCYALKSILLPLM-LKSIGVE 134 (394)
T ss_dssp EEEECTTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCTTCCCCCCCTT-CCEECTT
T ss_pred EeEhHHHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ce-EccchhhcccccchhhcccCc-eeeecce
Confidence 4434455677777888777753 355444556666777777766544 22 455555555555555544433 2223333
Q ss_pred cccCCCCCceeecccCccccCcccccccccccceeecccccccCCCCCcccccccccCCCCcEEEccCCccccCCCCccc
Q 039290 339 SLTNISELSVLDFGFNSFSGLIPTTFGNLRSLKLLSLAGNVLTSPTPDLSFLSSLTSCRNLEIIYLSENPINGILPSSIG 418 (1049)
Q Consensus 339 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~i~~~~p~~~~ 418 (1049)
.|.++..+......... .....+|.++.+|+.+.+.++. +.+... +|.++.+
T Consensus 135 aF~~~~~~~~~~~~~~~--~i~~~aF~~c~~L~~i~l~~~~-~~I~~~-----~F~~c~~-------------------- 186 (394)
T 4fs7_A 135 AFKGCDFKEITIPEGVT--VIGDEAFATCESLEYVSLPDSM-ETLHNG-----LFSGCGK-------------------- 186 (394)
T ss_dssp TTTTCCCSEEECCTTCC--EECTTTTTTCTTCCEEECCTTC-CEECTT-----TTTTCTT--------------------
T ss_pred eeecccccccccCcccc--ccchhhhcccCCCcEEecCCcc-ceeccc-----cccCCCC--------------------
Confidence 44444322222221111 1122344444444444443321 111111 1333333
Q ss_pred cccccccEEEccCCccccCCCCCCCCCCCccEEEccCCcccccCCccccCcCCCcceEeeccccCCCCCcccccccccce
Q 039290 419 NFSISMKSLSMESCNISGGIPKELGNINNLTVIRLGNNELTGTIPVTLGRLQKLQGLYLQNNKLEGSIPEDLCHLYRLAN 498 (1049)
Q Consensus 419 ~~~~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 498 (1049)
|+.+.+..+ +.......|.++..|+.+.+..+... +...+....+|+.+.+..+ ++......+..+..|+.
T Consensus 187 -----L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~ 257 (394)
T 4fs7_A 187 -----LKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLES 257 (394)
T ss_dssp -----CCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCE
T ss_pred -----ceEEEcCCC-ceEeCchhhccccccceeecCCCceE--eehhhcccCCCceEEECCC-ceeccccccccccccee
Confidence 333333332 22233445666667776666655433 2233334456777776543 33244456667777777
Q ss_pred EEeeCcccCCcCchhccCcccCCceeecCcccccccCcccccccccccccccCCccCCCCccCcCCCcceeEeecccccc
Q 039290 499 LYLGDNKLSGRLPACLGNLTSLRDLSLGSNALTSIIPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNAL 578 (1049)
Q Consensus 499 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 578 (1049)
+.+..+... ....+|..+..++.+....+.+ ....|....+|+.+.+.++ ++.....+|.++.+|+.+++..+ +
T Consensus 258 ~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v 331 (394)
T 4fs7_A 258 ISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-V 331 (394)
T ss_dssp EEECCTTCE-ECSCTTTTCTTCCEEEECSSEE---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-C
T ss_pred EEcCCCcce-eeccccccccccceeccCceee---ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-c
Confidence 777766543 5556677777777776665543 2345666677777776554 44444556777777777777543 5
Q ss_pred cccccccccCCCcccEEEeecccccCCccccccCccCCcEEeccCccccCCccccccccccccee
Q 039290 579 SGVIPVTIGGLQGLQLLSLRYNRLQGPIPESFGGLKSLNFVDMSNNNLSGTIPKSMEALSYLKHL 643 (1049)
Q Consensus 579 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l 643 (1049)
+.+...+|.++.+|+.+++..| ++.+...+|.++.+|+.+++..+ ++ .+...|.++++|+++
T Consensus 332 ~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 332 EEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp CEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred cEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcEE
Confidence 5455566777777777777655 55455567777777777777544 33 334456666665543
No 395
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.48 E-value=5.1e-14 Score=140.30 Aligned_cols=109 Identities=21% Similarity=0.214 Sum_probs=75.0
Q ss_pred ccccccCCccCCCCccCcCCCcceeEeecccccccccccccccCCCcccEEEeecccccCCccccccCccCCcEEeccCc
Q 039290 545 LRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALSGVIPVTIGGLQGLQLLSLRYNRLQGPIPESFGGLKSLNFVDMSNN 624 (1049)
Q Consensus 545 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 624 (1049)
+.+++++|.++. +|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 12 ~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 344455555443 333332 55666777777777666777777777777777777777766677777777888888888
Q ss_pred cccCCcccccccccccceeeccCCcccccCCC
Q 039290 625 NLSGTIPKSMEALSYLKHLNLSFNQLEGEIPT 656 (1049)
Q Consensus 625 ~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p~ 656 (1049)
+|++..+..+..+++|++|+|++|+|.|.++.
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~~ 120 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACSD 120 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBGG
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCchh
Confidence 77765555677777788888888888777663
No 396
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.48 E-value=4.3e-14 Score=141.90 Aligned_cols=133 Identities=18% Similarity=0.161 Sum_probs=76.4
Q ss_pred ccCCCCcEEEccCCccccCCCCccccccccccEEEccCCccccCCCCCCCCCCCccEEEccCCcccccCCccccCcCCCc
Q 039290 394 TSCRNLEIIYLSENPINGILPSSIGNFSISMKSLSMESCNISGGIPKELGNINNLTVIRLGNNELTGTIPVTLGRLQKLQ 473 (1049)
Q Consensus 394 ~~l~~L~~L~Ls~N~i~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 473 (1049)
..+.+|+.|++++|.++.+ | .+.....+|+.|++++|.+++. ..+..+++|++|+|++|.+++..+..|..+++|+
T Consensus 16 ~~~~~L~~L~l~~n~l~~i-~-~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 91 (176)
T 1a9n_A 16 TNAVRDRELDLRGYKIPVI-E-NLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 91 (176)
T ss_dssp ECTTSCEEEECTTSCCCSC-C-CGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred CCcCCceEEEeeCCCCchh-H-HhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCC
Confidence 3444555555555555532 2 2223223455555555555543 4566667777777777777755444556677777
Q ss_pred ceEeeccccCCCCCc--ccccccccceEEeeCcccCCcCchh----ccCcccCCceeecCccccc
Q 039290 474 GLYLQNNKLEGSIPE--DLCHLYRLANLYLGDNKLSGRLPAC----LGNLTSLRDLSLGSNALTS 532 (1049)
Q Consensus 474 ~L~L~~N~l~~~~~~--~~~~l~~L~~L~L~~N~l~~~~p~~----~~~l~~L~~L~L~~N~l~~ 532 (1049)
+|+|++|+|+ .+|. .+..+++|+.|++++|+++ .+|.. +..+++|+.||+++|.+..
T Consensus 92 ~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 92 ELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp EEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred EEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 7777777775 3444 5666666666666666665 34442 5666666666666665543
No 397
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.44 E-value=1.5e-13 Score=137.27 Aligned_cols=90 Identities=23% Similarity=0.261 Sum_probs=59.4
Q ss_pred cceeEeecccccccccccccccCCCcccEEEeecccccCCccccccCccCCcEEeccCccccCCcccccccccccceeec
Q 039290 566 KVVIEMDLSLNALSGVIPVTIGGLQGLQLLSLRYNRLQGPIPESFGGLKSLNFVDMSNNNLSGTIPKSMEALSYLKHLNL 645 (1049)
Q Consensus 566 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l 645 (1049)
++|++|+|++|+|++..|..|+++++|+.|+|++|+|++..+..|.++++|++|+|++|+|++..+..+..+++|++|+|
T Consensus 33 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L 112 (174)
T 2r9u_A 33 TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYL 112 (174)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEe
Confidence 45566666666666666666666667777777777776655556666777777777777776544445666777777777
Q ss_pred cCCcccccCC
Q 039290 646 SFNQLEGEIP 655 (1049)
Q Consensus 646 ~~N~l~~~~p 655 (1049)
++|+|.|.++
T Consensus 113 ~~N~~~c~~~ 122 (174)
T 2r9u_A 113 YNNPWDCECR 122 (174)
T ss_dssp CSSCBCTTBG
T ss_pred CCCCcccccc
Confidence 7777766654
No 398
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.42 E-value=4.9e-13 Score=133.12 Aligned_cols=109 Identities=22% Similarity=0.217 Sum_probs=81.5
Q ss_pred CCceeecCcccccccCcccccccccccccccCCccCCCCccCcCCCcceeEeecccccccccccccccCCCcccEEEeec
Q 039290 520 LRDLSLGSNALTSIIPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALSGVIPVTIGGLQGLQLLSLRY 599 (1049)
Q Consensus 520 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 599 (1049)
.+.+++++|+++. +|..+ .++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|.++++|+.|+|++
T Consensus 11 ~~~l~~s~n~l~~-ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCc-cCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 3455566666554 33333 25566677777777766677777777788888888888877777788889999999999
Q ss_pred ccccCCccccccCccCCcEEeccCccccCCcc
Q 039290 600 NRLQGPIPESFGGLKSLNFVDMSNNNLSGTIP 631 (1049)
Q Consensus 600 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 631 (1049)
|+|++..+..|.++++|++|+|++|++++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 99998777789999999999999999986543
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.37 E-value=7.1e-13 Score=132.42 Aligned_cols=106 Identities=22% Similarity=0.214 Sum_probs=75.2
Q ss_pred CceeecCcccccccCcccccccccccccccCCccCCCCccCcCCCcceeEeecccccccccccccccCCCcccEEEeecc
Q 039290 521 RDLSLGSNALTSIIPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALSGVIPVTIGGLQGLQLLSLRYN 600 (1049)
Q Consensus 521 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 600 (1049)
+.+++++|+++. +|..+. ++|++|+|++|+|++..|..|..+++|++|+|++|+|++..+..|.++++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~~-iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLAS-VPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCCc-cCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 345555555543 333332 45666666666666666666777777777777777777666666788888888888888
Q ss_pred cccCCccccccCccCCcEEeccCccccCC
Q 039290 601 RLQGPIPESFGGLKSLNFVDMSNNNLSGT 629 (1049)
Q Consensus 601 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 629 (1049)
+|++..+..|.++++|++|+|++|++...
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccc
Confidence 88877777788899999999999998843
No 400
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.29 E-value=4.4e-14 Score=159.33 Aligned_cols=170 Identities=19% Similarity=0.198 Sum_probs=82.5
Q ss_pred CCccEEEccCCcccccCCccccCc-----CCCcceEeeccccCCCCCcccc-cccccceEEeeCcccCCcCchhcc----
Q 039290 446 NNLTVIRLGNNELTGTIPVTLGRL-----QKLQGLYLQNNKLEGSIPEDLC-HLYRLANLYLGDNKLSGRLPACLG---- 515 (1049)
Q Consensus 446 ~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~p~~~~---- 515 (1049)
+.|+.|+|++|.++......+... ++|++|+|++|.|+......+. .+.+|+.|+|++|.++......+.
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 456666777666664333333222 4566666666655432222221 234455555555555432222221
Q ss_pred -CcccCCceeecCcccccccCcccccccccccccccCCccCCCCccCcCCCcceeEeeccccccccc----ccccccCCC
Q 039290 516 -NLTSLRDLSLGSNALTSIIPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALSGV----IPVTIGGLQ 590 (1049)
Q Consensus 516 -~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~ 590 (1049)
..++|++|+|++|.++..... .++..+..+++|++|||++|.|++. ++..+...+
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~--------------------~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~ 211 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVA--------------------VLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNR 211 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHH--------------------HHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCS
T ss_pred hcCCccceeeCCCCCCChHHHH--------------------HHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCC
Confidence 223444444444444321111 1112223344555555555555532 244455566
Q ss_pred cccEEEeecccccCC----ccccccCccCCcEEeccCccccCCcccccc
Q 039290 591 GLQLLSLRYNRLQGP----IPESFGGLKSLNFVDMSNNNLSGTIPKSME 635 (1049)
Q Consensus 591 ~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 635 (1049)
+|+.|+|++|+|++. ++..+...++|++|||++|.|+..-...+.
T Consensus 212 ~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~ 260 (372)
T 3un9_A 212 QLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVLR 260 (372)
T ss_dssp CCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHHH
T ss_pred CcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHHH
Confidence 677777777777642 233444556777777777777654443333
No 401
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.29 E-value=3.1e-12 Score=143.72 Aligned_cols=92 Identities=21% Similarity=0.216 Sum_probs=53.9
Q ss_pred cCcccccccCCcEecccc-CCccccCcccccccCCccEEEeCCCCccCCCcccccCCCcccEEcCCCccCccccCCCccc
Q 039290 113 LPEELSHLRGLKYFDFRF-NNFHIEIPSWFVSLPRLQHLLLKHNSFVGKIPETIGYLSLLQELDLSDNQLSGTIPSSIFN 191 (1049)
Q Consensus 113 ~p~~~~~L~~L~~L~l~~-n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~ 191 (1049)
||. |..+++|++|+|++ |++.+..|..|++|++|++|+|++|+|++..|..|+.|++|++|||++|+|+ .+|+.++.
T Consensus 24 ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~~~~~ 101 (347)
T 2ifg_A 24 LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALE-SLSWKTVQ 101 (347)
T ss_dssp TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCS-CCCSTTTC
T ss_pred cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccc-eeCHHHcc
Confidence 444 55555556666654 5555555556666666666666666666666666666666666666666666 44444332
Q ss_pred ccccCCCCccceEEeeccccC
Q 039290 192 ISSCQNLPVLEGLFISYNQLT 212 (1049)
Q Consensus 192 l~~l~~l~~L~~L~l~~N~l~ 212 (1049)
.++ |+.|+|.+|.+.
T Consensus 102 -----~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 102 -----GLS-LQELVLSGNPLH 116 (347)
T ss_dssp -----SCC-CCEEECCSSCCC
T ss_pred -----cCC-ceEEEeeCCCcc
Confidence 122 666666666665
No 402
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.26 E-value=2.4e-13 Score=153.23 Aligned_cols=135 Identities=21% Similarity=0.260 Sum_probs=93.8
Q ss_pred ccCCceeecCcccccccCcccc-cccccccccccCCccCCCCccCc-----CCCcceeEeeccccccccc----cccccc
Q 039290 518 TSLRDLSLGSNALTSIIPSTLW-NLKDILRFNLSSNSLNGSLLPDI-----GNLKVVIEMDLSLNALSGV----IPVTIG 587 (1049)
Q Consensus 518 ~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~~~~~-----~~l~~L~~L~Ls~N~l~~~----~p~~~~ 587 (1049)
++|++|+|++|.++......+. .+++|+.|+|++|.++......+ ....+|++|+|++|.|++. ++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 4555555555555443222222 34556666666666654333332 2356788889999988753 445567
Q ss_pred CCCcccEEEeecccccCC----ccccccCccCCcEEeccCccccCC----cccccccccccceeeccCCcccc
Q 039290 588 GLQGLQLLSLRYNRLQGP----IPESFGGLKSLNFVDMSNNNLSGT----IPKSMEALSYLKHLNLSFNQLEG 652 (1049)
Q Consensus 588 ~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~l~l~~N~l~~ 652 (1049)
.+++|++|+|++|+|++. ++..+...++|++|||++|.|+.. +...+...++|++|+|++|++..
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCH
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCH
Confidence 889999999999999863 366778889999999999999853 34445567899999999999864
No 403
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.26 E-value=9.9e-11 Score=133.78 Aligned_cols=64 Identities=6% Similarity=0.057 Sum_probs=29.0
Q ss_pred ccCcCCCcceeEeecccccccccccccccCCCcccEEEeecccccCCccccccCccCCcEEeccCccc
Q 039290 559 LPDIGNLKVVIEMDLSLNALSGVIPVTIGGLQGLQLLSLRYNRLQGPIPESFGGLKSLNFVDMSNNNL 626 (1049)
Q Consensus 559 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 626 (1049)
..+|.++.+|+++.+..+ ++.+...+|.++.+|+.+++.+|... -..|....+|+.+.+..|.+
T Consensus 327 ~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~---~~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 327 DDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQ---WNAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp TTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHH---HHTCBCCCCC----------
T ss_pred HhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceee---hhhhhccCCCCEEEeCCCCE
Confidence 334555555555555432 44344556666666666666665443 13455556666666665544
No 404
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.25 E-value=1.9e-11 Score=131.45 Aligned_cols=146 Identities=16% Similarity=0.112 Sum_probs=116.1
Q ss_pred HHHhcCCCCCceecCCCcEEEEEEEeCCCcEEEEEEeecccCCCHHHHHHHHHHHhhcC-CCceeeEEeeeecCCeeEEE
Q 039290 757 LRATDGFSENKLLGMGSFGSVYKGVLPDGMEIAAKVFHMEFDGSLESFHAECKVMGSIR-HRNLVKIISSCSNNDFKALV 835 (1049)
Q Consensus 757 ~~~~~~~~~~~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-hpniv~l~~~~~~~~~~~lv 835 (1049)
....++|+.....+.|+.+.||++... ++.+++|+...........+.+|+++++.+. +..+.++++++.+.+..|+|
T Consensus 10 ~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv 88 (263)
T 3tm0_A 10 KKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLL 88 (263)
T ss_dssp HHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEE
T ss_pred HHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEE
Confidence 344567888888999999999999864 6899999987543334457899999999984 67788999999888899999
Q ss_pred EeccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHcc--------------------------------------
Q 039290 836 LEYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFG-------------------------------------- 877 (1049)
Q Consensus 836 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~-------------------------------------- 877 (1049)
|||++|.++.+.+.. ..+...++.+++++++.||..
T Consensus 89 ~e~i~G~~l~~~~~~------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (263)
T 3tm0_A 89 MSEADGVLCSEEYED------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDT 162 (263)
T ss_dssp EECCSSEEHHHHCCT------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTC
T ss_pred EEecCCeehhhccCC------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccc
Confidence 999999998875321 122347889999999999941
Q ss_pred ------------------CCCCeEEcCCCCCCeeecCCCceEEecccCce
Q 039290 878 ------------------YSTPIVHCDIKPSNVLLNESMVGHLSDFGIAK 909 (1049)
Q Consensus 878 ------------------~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~ 909 (1049)
....++|||++|.||++++++.+.|+||+.+.
T Consensus 163 ~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 163 PFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp SSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred cCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 01458999999999999876667799999775
No 405
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.24 E-value=2.6e-10 Score=130.27 Aligned_cols=331 Identities=11% Similarity=0.127 Sum_probs=186.4
Q ss_pred ccccccc-cccceEEeccCccCCCCCCcccCCCCCccEEEcCCCC---CCCCCCccccCCCCCceeecccCccccCcccc
Q 039290 288 PASIFNI-STLKELAVTDNDLLGSLPSSIDLGLPNLERLFLGENN---FSGTIPSSLTNISELSVLDFGFNSFSGLIPTT 363 (1049)
Q Consensus 288 p~~~~~l-~~L~~L~l~~N~l~~~~p~~~~~~l~~L~~L~L~~N~---l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 363 (1049)
..+|.++ ..|+.+.+.++ ++ .|.+..|.++.+|+.+.+..|. ++..-..+|..+.+|+.+.+..+ +..+....
T Consensus 56 ~~aF~~~~~~L~sI~iP~s-vt-~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~a 132 (394)
T 4gt6_A 56 DRVFCNYKYVLTSVQIPDT-VT-EIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEA 132 (394)
T ss_dssp TTTTTTCCSCCCEEEECTT-CC-EECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTT
T ss_pred HhhccCCCCcCEEEEECCC-ee-EEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhh
Confidence 3456665 35788877754 33 5666667777777777777653 44334556777777777766544 44344566
Q ss_pred cccccccceeecccccccCCCCCcccccccccCCCCcEEEccCCccccCCCCccccccccccEEEccCCccccCCCCCCC
Q 039290 364 FGNLRSLKLLSLAGNVLTSPTPDLSFLSSLTSCRNLEIIYLSENPINGILPSSIGNFSISMKSLSMESCNISGGIPKELG 443 (1049)
Q Consensus 364 ~~~l~~L~~L~L~~N~l~~~~~~~~~l~~l~~l~~L~~L~Ls~N~i~~~~p~~~~~~~~~L~~L~L~~n~i~~~~p~~~~ 443 (1049)
|..+.+|+.+.+..+ ++.+... +|..+..|+.+.+..+ ++.+....|.. ..|+.+.+..+-.. .....|.
T Consensus 133 F~~c~~L~~i~lp~~-~~~I~~~-----~F~~c~~L~~i~~~~~-~~~I~~~aF~~--~~l~~i~ip~~~~~-i~~~af~ 202 (394)
T 4gt6_A 133 FHHCEELDTVTIPEG-VTSVADG-----MFSYCYSLHTVTLPDS-VTAIEERAFTG--TALTQIHIPAKVTR-IGTNAFS 202 (394)
T ss_dssp TTTCTTCCEEECCTT-CCEECTT-----TTTTCTTCCEEECCTT-CCEECTTTTTT--CCCSEEEECTTCCE-ECTTTTT
T ss_pred hhhhcccccccccce-eeeeccc-----ceecccccccccccce-eeEeccccccc--cceeEEEECCcccc-cccchhh
Confidence 777777777777543 3333222 3566666776666544 22222222221 13444444433221 2333444
Q ss_pred CCCCccEEEccCCcccccCCccccCcCCCcceEeeccccCCCCCcccccccccceEEeeCcccCCcCchhccCcccCCce
Q 039290 444 NINNLTVIRLGNNELTGTIPVTLGRLQKLQGLYLQNNKLEGSIPEDLCHLYRLANLYLGDNKLSGRLPACLGNLTSLRDL 523 (1049)
Q Consensus 444 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 523 (1049)
++.+++......+.... ....+.......... ...+.....+..+.+.+ .++.....+|.++..|+.+
T Consensus 203 ~c~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~ip~-~v~~i~~~aF~~c~~L~~i 270 (394)
T 4gt6_A 203 ECFALSTITSDSESYPA-IDNVLYEKSANGDYA----------LIRYPSQREDPAFKIPN-GVARIETHAFDSCAYLASV 270 (394)
T ss_dssp TCTTCCEEEECCSSSCB-SSSCEEEECTTSCEE----------EEECCTTCCCSEEECCT-TEEEECTTTTTTCSSCCEE
T ss_pred hccccceeccccccccc-ccceeeccccccccc----------ccccccccccceEEcCC-cceEcccceeeecccccEE
Confidence 44444444444333321 111110000000000 00011122333444432 2333445677888888888
Q ss_pred eecCcccccccCcccccccccccccccCCccCCCCccCcCCCcceeEeecccccccccccccccCCCcccEEEeeccccc
Q 039290 524 SLGSNALTSIIPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALSGVIPVTIGGLQGLQLLSLRYNRLQ 603 (1049)
Q Consensus 524 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 603 (1049)
.+.++.. .+...+|.+++.|+.+.+. +.++.....+|.++.+|+.+++..+ ++.+...+|.++.+|+.+.+..+ ++
T Consensus 271 ~lp~~~~-~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~ 346 (394)
T 4gt6_A 271 KMPDSVV-SIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VT 346 (394)
T ss_dssp ECCTTCC-EECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CC
T ss_pred ecccccc-eecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cC
Confidence 8865543 4566778888888888886 4455555677888888888888764 66566778999999999999755 77
Q ss_pred CCccccccCccCCcEEeccCccccCCcccccccccccceeeccCCcc
Q 039290 604 GPIPESFGGLKSLNFVDMSNNNLSGTIPKSMEALSYLKHLNLSFNQL 650 (1049)
Q Consensus 604 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~N~l 650 (1049)
.+...+|.++++|+.+++.+|.... ..+....+|+.+.+..|.+
T Consensus 347 ~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 347 KIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp BCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC----------
T ss_pred EEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCCE
Confidence 6777899999999999999886541 3566677788887766644
No 406
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.23 E-value=1e-11 Score=139.59 Aligned_cols=103 Identities=22% Similarity=0.242 Sum_probs=54.9
Q ss_pred ceeecCc-ccccccCcccccccccccccccC-CccCCCCccCcCCCcceeEeecccccccccccccccCCCcccEEEeec
Q 039290 522 DLSLGSN-ALTSIIPSTLWNLKDILRFNLSS-NSLNGSLLPDIGNLKVVIEMDLSLNALSGVIPVTIGGLQGLQLLSLRY 599 (1049)
Q Consensus 522 ~L~L~~N-~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 599 (1049)
.++++++ +|++ +|. +..+++|+.|+|++ |.|++..+..|..+++|++|+|++|+|++..|..|.++++|+.|+|++
T Consensus 12 ~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 3455555 5654 344 55555555555554 555554445555555555555555555555555555555555555555
Q ss_pred ccccCCccccccCccCCcEEeccCcccc
Q 039290 600 NRLQGPIPESFGGLKSLNFVDMSNNNLS 627 (1049)
Q Consensus 600 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 627 (1049)
|+|++..+..|..++ |+.|+|++|++.
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 555544444444443 555555555554
No 407
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=99.12 E-value=1.9e-12 Score=136.67 Aligned_cols=149 Identities=20% Similarity=0.211 Sum_probs=101.0
Q ss_pred CceeeeEEEcCCCCcEEEEEEec---cccccccCC-CCCCcchhhhhhcccCccccccCcc-cccccCCcE--eccccCC
Q 039290 60 VCSWIGVTCGVRNRRVTALNISY---LGLTGTIPP-QLGNLSFLAVLAIRNNSFFGSLPEE-LSHLRGLKY--FDFRFNN 132 (1049)
Q Consensus 60 ~c~w~gv~c~~~~~~v~~l~l~~---~~l~g~~~~-~~~~l~~L~~L~l~~n~~~g~~p~~-~~~L~~L~~--L~l~~n~ 132 (1049)
.|+|.|+.|+..+.+|+.+-..+ ..+.|.+++ .+..+.. .|..+.|...+.++-+ +.....|+. ++++.|+
T Consensus 77 l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~ 154 (267)
T 3rw6_A 77 LKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNR 154 (267)
T ss_dssp HHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTS
T ss_pred HHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCCH
Confidence 58999999998777888777766 455666653 2333333 4555666666655532 555556665 6777774
Q ss_pred c---cccCcccccccCCccEEEeCCCCccC--CCcccccCCCcccEEcCCCccCccccCCCcccccccCCCCccceEEee
Q 039290 133 F---HIEIPSWFVSLPRLQHLLLKHNSFVG--KIPETIGYLSLLQELDLSDNQLSGTIPSSIFNISSCQNLPVLEGLFIS 207 (1049)
Q Consensus 133 ~---~~~~p~~~~~l~~L~~L~L~~n~l~~--~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~l~~l~~L~~L~l~ 207 (1049)
. .+.++....++++|++|+|++|++++ .+|..++.+++|+.|+|++|+|++. ..+. .++.+ .|++|+|+
T Consensus 155 ~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~---~l~~l-~L~~L~L~ 228 (267)
T 3rw6_A 155 RSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELD---KIKGL-KLEELWLD 228 (267)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGG---GGTTS-CCSEEECT
T ss_pred HHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhh---hcccC-CcceEEcc
Confidence 3 22233333568899999999999987 5667788899999999999999843 2233 33344 67888888
Q ss_pred ccccCCCCC
Q 039290 208 YNQLTGPIP 216 (1049)
Q Consensus 208 ~N~l~~~~p 216 (1049)
+|.+.+.+|
T Consensus 229 ~Npl~~~~~ 237 (267)
T 3rw6_A 229 GNSLCDTFR 237 (267)
T ss_dssp TSTTGGGCS
T ss_pred CCcCccccC
Confidence 888877665
No 408
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.07 E-value=1.4e-10 Score=124.42 Aligned_cols=137 Identities=14% Similarity=0.092 Sum_probs=101.5
Q ss_pred CCCCCceecCCCcEEEEEEEeCCCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCc--eeeEEeeeecCCeeEEEEecc
Q 039290 762 GFSENKLLGMGSFGSVYKGVLPDGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRN--LVKIISSCSNNDFKALVLEYM 839 (1049)
Q Consensus 762 ~~~~~~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpn--iv~l~~~~~~~~~~~lv~e~~ 839 (1049)
+|......+.|..+.||++...+|..+++|+.... ....+.+|+++++.+++.+ +.+++++...++..++||||+
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i 97 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEV 97 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECC
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEec
Confidence 44443333466679999998877888999997643 2356788999999885434 566888888888889999999
Q ss_pred CCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccC-----------------------------------------
Q 039290 840 SNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGY----------------------------------------- 878 (1049)
Q Consensus 840 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~----------------------------------------- 878 (1049)
+|.++. ... .+ ...++.++++.++.+|...
T Consensus 98 ~G~~l~--~~~----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (264)
T 1nd4_A 98 PGQDLL--SSH----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPA 168 (264)
T ss_dssp SSEETT--TSC----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHH
T ss_pred CCcccC--cCc----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHH
Confidence 998884 211 11 2357788888888888321
Q ss_pred --------------CCCeEEcCCCCCCeeecCCCceEEecccCcee
Q 039290 879 --------------STPIVHCDIKPSNVLLNESMVGHLSDFGIAKI 910 (1049)
Q Consensus 879 --------------~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~ 910 (1049)
...++|||++|.||++++++.+.|+|||.+..
T Consensus 169 ~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 169 ELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 11299999999999998776677999998763
No 409
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.92 E-value=8e-11 Score=131.36 Aligned_cols=161 Identities=14% Similarity=0.227 Sum_probs=96.4
Q ss_pred CcccccccCCccEEEeCCCCccCCCcccccCCCcccEEcCCCccCccccCCCcccccccCCCCccceEEeec--cccCCC
Q 039290 137 IPSWFVSLPRLQHLLLKHNSFVGKIPETIGYLSLLQELDLSDNQLSGTIPSSIFNISSCQNLPVLEGLFISY--NQLTGP 214 (1049)
Q Consensus 137 ~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~l~~l~~L~~L~l~~--N~l~~~ 214 (1049)
++..+..+++|+.|+|++|.-. .+|. +. +++|++|+|+.|.++......+. ...+|+|++|+|+. |...|.
T Consensus 164 L~~ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~----~~~lp~L~~L~L~~~~~~~~~~ 236 (362)
T 2ra8_A 164 LSPVLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSVVEDIL----GSDLPNLEKLVLYVGVEDYGFD 236 (362)
T ss_dssp CHHHHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHHHHHHH----HSBCTTCCEEEEECBCGGGTCC
T ss_pred HHHHHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHHHHHHH----HccCCCCcEEEEeccccccccc
Confidence 4455566677777777766311 2333 32 67777777777666532221221 02456677777753 222111
Q ss_pred -----CCCCc--ccccccceecccccccccccCCCC---ccccccceEEecccccccc----CccccccccceEEEeecc
Q 039290 215 -----IPTNL--WKCRELHVVSLAFNKFQGGIPRDI---GNLTSVRNLFLGNNSLIGE----IPNEIGNLRNLEVLGVQS 280 (1049)
Q Consensus 215 -----~p~~l--~~l~~L~~L~L~~N~l~~~~p~~~---~~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~L~~ 280 (1049)
+...+ ..+++|++|+|++|.++...+..+ ..+++|++|+|+.|.+.+. ++..+.++++|+.|+|++
T Consensus 237 ~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~ 316 (362)
T 2ra8_A 237 GDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKY 316 (362)
T ss_dssp SCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCS
T ss_pred hhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCC
Confidence 11112 236788888888887765433333 2578899999999998763 455556788999999999
Q ss_pred ccCCCcccccccc-ccccceEEeccCc
Q 039290 281 SNLAGLIPASIFN-ISTLKELAVTDND 306 (1049)
Q Consensus 281 n~l~~~~p~~~~~-l~~L~~L~l~~N~ 306 (1049)
|.++...-..+.. + ..+++++.++
T Consensus 317 n~i~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 317 NYLSDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp BBCCHHHHHHHHHHC--CSEEECCSBC
T ss_pred CcCCHHHHHHHHHHc--CCEEEecCCc
Confidence 9877543333332 2 3668888876
No 410
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.91 E-value=4.3e-08 Score=111.27 Aligned_cols=108 Identities=12% Similarity=0.086 Sum_probs=51.9
Q ss_pred CCCCCCCCccEEEccCCcccccCCccccCcCCCcceEeeccccCCCCCcccccccccceEEeeCcccCCcCchhccCccc
Q 039290 440 KELGNINNLTVIRLGNNELTGTIPVTLGRLQKLQGLYLQNNKLEGSIPEDLCHLYRLANLYLGDNKLSGRLPACLGNLTS 519 (1049)
Q Consensus 440 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 519 (1049)
..+....+|+.+.+..+ ++.....+|.++.+|+.+.+..+ ++..-...|.++.+|+.+.+..+ +......+|.++++
T Consensus 211 ~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~ 287 (379)
T 4h09_A 211 YGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSN 287 (379)
T ss_dssp TTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTT
T ss_pred cccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccc
Confidence 34444555555555433 22234445555555555555443 33233344555555555555432 33233344555555
Q ss_pred CCceeecCcccccccCccccccccccccccc
Q 039290 520 LRDLSLGSNALTSIIPSTLWNLKDILRFNLS 550 (1049)
Q Consensus 520 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 550 (1049)
|+.+.+.++.++.+...+|.++.+|+.+.|.
T Consensus 288 L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp 318 (379)
T 4h09_A 288 LTKVVMDNSAIETLEPRVFMDCVKLSSVTLP 318 (379)
T ss_dssp CCEEEECCTTCCEECTTTTTTCTTCCEEECC
T ss_pred cccccccccccceehhhhhcCCCCCCEEEcC
Confidence 5555555555554444445444444444443
No 411
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.91 E-value=1.6e-08 Score=114.77 Aligned_cols=163 Identities=12% Similarity=0.077 Sum_probs=85.1
Q ss_pred CCCccEEEccCCcccccCCccccCcCCCcceEeeccccCCCCCcccccccccceEEeeCcccCCcCchhccCcccCCcee
Q 039290 445 INNLTVIRLGNNELTGTIPVTLGRLQKLQGLYLQNNKLEGSIPEDLCHLYRLANLYLGDNKLSGRLPACLGNLTSLRDLS 524 (1049)
Q Consensus 445 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 524 (1049)
...+..+.+..+.-. .....+....+|+.+.+..+ +.......|.++..|+.+.+..+ ++.....+|.++.+|+.+.
T Consensus 193 ~~~~~~~~~~~~~~~-i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~ 269 (379)
T 4h09_A 193 AKTGTEFTIPSTVKT-VTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLN 269 (379)
T ss_dssp TCCCSEEECCTTCCE-ECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEE
T ss_pred cccccccccccceeE-Eeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccc
Confidence 344444444333222 34445555566666665443 22233344555555555555443 3333344455555555554
Q ss_pred ecCcccccccCcccccccccccccccCCccCCCCccCcCCCcceeEeecccccccccccccccCCCcccEEEeecccccC
Q 039290 525 LGSNALTSIIPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALSGVIPVTIGGLQGLQLLSLRYNRLQG 604 (1049)
Q Consensus 525 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 604 (1049)
+..+ ++. .....|.++.+|+.+++.++.++.+...+|.++.+|+.+.|..+ ++.
T Consensus 270 l~~~-i~~------------------------i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~ 323 (379)
T 4h09_A 270 FYAK-VKT------------------------VPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKT 323 (379)
T ss_dssp ECCC-CSE------------------------ECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCE
T ss_pred cccc-cee------------------------ccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccE
Confidence 4322 332 23345555666666666666665555566777777777777544 554
Q ss_pred CccccccCccCCcEEeccCccccCCcccccccc
Q 039290 605 PIPESFGGLKSLNFVDMSNNNLSGTIPKSMEAL 637 (1049)
Q Consensus 605 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 637 (1049)
+...+|.++.+|+.+.+..+ ++..-...|.+.
T Consensus 324 I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c 355 (379)
T 4h09_A 324 IQVYAFKNCKALSTISYPKS-ITLIESGAFEGS 355 (379)
T ss_dssp ECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTS
T ss_pred EHHHHhhCCCCCCEEEECCc-cCEEchhHhhCC
Confidence 55567777777777776544 442223344443
No 412
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.87 E-value=4.6e-09 Score=118.29 Aligned_cols=143 Identities=17% Similarity=0.187 Sum_probs=107.4
Q ss_pred CCceecCCCcEEEEEEEeCCCcEEEEEEee--ccc-CCCHHHHHHHHHHHhhcC--CCceeeEEeeeecC---CeeEEEE
Q 039290 765 ENKLLGMGSFGSVYKGVLPDGMEIAAKVFH--MEF-DGSLESFHAECKVMGSIR--HRNLVKIISSCSNN---DFKALVL 836 (1049)
Q Consensus 765 ~~~~lg~G~fg~Vy~a~~~~~~~vavK~~~--~~~-~~~~~~~~~e~~~l~~l~--hpniv~l~~~~~~~---~~~~lv~ 836 (1049)
..+.++.|.++.||++... +..+++|+.. ... ......+.+|+++++.+. +..++++++++.+. +..++||
T Consensus 42 ~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred eEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 4578999999999999875 4688888875 322 122457888999999996 45688899888776 4589999
Q ss_pred eccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccC--------------------------------------
Q 039290 837 EYMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGY-------------------------------------- 878 (1049)
Q Consensus 837 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~-------------------------------------- 878 (1049)
||++|..+.+.. ...++..++..++.+++++|+.||...
T Consensus 121 e~v~G~~l~~~~---~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (359)
T 3dxp_A 121 EFVSGRVLWDQS---LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAM 197 (359)
T ss_dssp ECCCCBCCCCTT---CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHH
T ss_pred EecCCeecCCCc---cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHH
Confidence 999998775421 123678888899999999999999420
Q ss_pred -----------------CCCeEEcCCCCCCeeecCCCc--eEEecccCceec
Q 039290 879 -----------------STPIVHCDIKPSNVLLNESMV--GHLSDFGIAKIL 911 (1049)
Q Consensus 879 -----------------~~~ivH~Dlkp~NIl~~~~~~--~kl~DfGla~~~ 911 (1049)
...++|||+++.||+++.++. +.|+||+.+..-
T Consensus 198 ~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 198 DSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp HHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred HHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 257999999999999997653 689999998753
No 413
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.84 E-value=9.5e-10 Score=122.65 Aligned_cols=84 Identities=18% Similarity=0.221 Sum_probs=49.1
Q ss_pred CCcceeEeeccccccccccccccc---CCCcccEEEeecccccCC----ccccccCccCCcEEeccCccccCCccccccc
Q 039290 564 NLKVVIEMDLSLNALSGVIPVTIG---GLQGLQLLSLRYNRLQGP----IPESFGGLKSLNFVDMSNNNLSGTIPKSMEA 636 (1049)
Q Consensus 564 ~l~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 636 (1049)
.+++|++|+|++|.+.+..+..+. .+++|+.|+|+.|.|++. ++..+..+++|+.|+|++|.++...-..+..
T Consensus 250 ~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~ 329 (362)
T 2ra8_A 250 RFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQK 329 (362)
T ss_dssp TCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHH
T ss_pred CCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHH
Confidence 356677777777766643333332 466777777777777753 2333345677777777777776433333332
Q ss_pred -ccccceeeccCCc
Q 039290 637 -LSYLKHLNLSFNQ 649 (1049)
Q Consensus 637 -l~~L~~l~l~~N~ 649 (1049)
+ ...+++++|+
T Consensus 330 al--g~~~~~~~~~ 341 (362)
T 2ra8_A 330 SL--PMKIDVSDSQ 341 (362)
T ss_dssp HC--CSEEECCSBC
T ss_pred Hc--CCEEEecCCc
Confidence 2 2446676665
No 414
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.78 E-value=2.7e-09 Score=117.15 Aligned_cols=187 Identities=15% Similarity=0.133 Sum_probs=123.9
Q ss_pred CceecCCCcEEEEEEEeCCCcEEEEEEeecccCCCHHHHHHHHHHHhhcC-CCc--eeeEEeeeecCC---eeEEEEecc
Q 039290 766 NKLLGMGSFGSVYKGVLPDGMEIAAKVFHMEFDGSLESFHAECKVMGSIR-HRN--LVKIISSCSNND---FKALVLEYM 839 (1049)
Q Consensus 766 ~~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-hpn--iv~l~~~~~~~~---~~~lv~e~~ 839 (1049)
.+.++.|....||++. ..+++|+.... .....+.+|+++++.+. +.. +.+++......+ ..|+|||++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4568999999999863 56888886532 23467889999998883 322 445555544333 358899999
Q ss_pred CCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHcc------------------------------------------
Q 039290 840 SNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFG------------------------------------------ 877 (1049)
Q Consensus 840 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~------------------------------------------ 877 (1049)
+|.++.+... ..++..++..++.++++.++.||..
T Consensus 99 ~G~~l~~~~~---~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 175 (304)
T 3sg8_A 99 KGVPLTPLLL---NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDD 175 (304)
T ss_dssp CCEECCHHHH---HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHH
T ss_pred CCeECCcccc---ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHH
Confidence 9988865332 1357778888899999999998841
Q ss_pred -------------CCCCeEEcCCCCCCeeecC--CCceEEecccCceecCCCcccccccc----cc---------ccCcc
Q 039290 878 -------------YSTPIVHCDIKPSNVLLNE--SMVGHLSDFGIAKILGKEESMRQTKT----LG---------TIGYM 929 (1049)
Q Consensus 878 -------------~~~~ivH~Dlkp~NIl~~~--~~~~kl~DfGla~~~~~~~~~~~~~~----~~---------~~~y~ 929 (1049)
....++|+|++|.||++++ +..+.|+||+.+..-.+......... .+ ..++.
T Consensus 176 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~ 255 (304)
T 3sg8_A 176 FYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHK 255 (304)
T ss_dssp HHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTCS
T ss_pred HHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCCC
Confidence 0135799999999999997 56688999999875433211100000 00 00111
Q ss_pred c-ccccCCCCcCcccchHHHHHHHHHHHhCCCCCC
Q 039290 930 A-PEYGREGKVSRKCDVYSYGIMLMETFTKKKPTD 963 (1049)
Q Consensus 930 a-PE~~~~~~~~~~~DvwslG~il~elltg~~p~~ 963 (1049)
. |+... ......+.|++|.++|++.+|..+|-
T Consensus 256 ~~~~~~~--r~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 256 DIPTVLE--KYRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp CHHHHHH--HHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred CcHHHHH--HHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 1 22111 11223689999999999999987754
No 415
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.47 E-value=5e-07 Score=99.66 Aligned_cols=138 Identities=16% Similarity=0.174 Sum_probs=103.3
Q ss_pred CCCCCceecCCCcEEEEEEEeCCCcEEEEEEeecccCCCHHHHHHHHHHHhhcCC----CceeeEEeeeecCCeeEEEEe
Q 039290 762 GFSENKLLGMGSFGSVYKGVLPDGMEIAAKVFHMEFDGSLESFHAECKVMGSIRH----RNLVKIISSCSNNDFKALVLE 837 (1049)
Q Consensus 762 ~~~~~~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h----pniv~l~~~~~~~~~~~lv~e 837 (1049)
.+...+.++.|....||++ +..+++|+.... .....+.+|.++++.+.+ ..+.+++++ +..++|||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme 107 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMK 107 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEe
Confidence 5667789999999999998 677888886432 123568899999988865 234555554 45689999
Q ss_pred ccCCCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccC---------------------------------------
Q 039290 838 YMSNGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGY--------------------------------------- 878 (1049)
Q Consensus 838 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~--------------------------------------- 878 (1049)
|++|.++.+.... .++..+...++.++++.++.||...
T Consensus 108 ~i~G~~l~~~~~~---~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (320)
T 3r70_A 108 YIKGERITYEQYH---KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDE 184 (320)
T ss_dssp CCCCBCCCHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHH
T ss_pred ecCCccccccccc---cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccccccc
Confidence 9999888643221 2566777788888888888888321
Q ss_pred ---------------------CCCeEEcCCCCCCeeecCCCceEEecccCceecC
Q 039290 879 ---------------------STPIVHCDIKPSNVLLNESMVGHLSDFGIAKILG 912 (1049)
Q Consensus 879 ---------------------~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~ 912 (1049)
...++|+|++|.||+++.++.+.|+||+.+..-.
T Consensus 185 ~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~~ 239 (320)
T 3r70_A 185 MLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGD 239 (320)
T ss_dssp HHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEEC
T ss_pred chHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccCC
Confidence 1235999999999999987667999999987543
No 416
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.42 E-value=3.3e-08 Score=104.27 Aligned_cols=93 Identities=20% Similarity=0.191 Sum_probs=73.6
Q ss_pred CCCcchhhh--hhcccCcc---ccccCcccccccCCcEeccccCCccc--cCcccccccCCccEEEeCCCCccCCCcccc
Q 039290 93 LGNLSFLAV--LAIRNNSF---FGSLPEELSHLRGLKYFDFRFNNFHI--EIPSWFVSLPRLQHLLLKHNSFVGKIPETI 165 (1049)
Q Consensus 93 ~~~l~~L~~--L~l~~n~~---~g~~p~~~~~L~~L~~L~l~~n~~~~--~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~ 165 (1049)
+...+.|.. ++++.|.. .+.++..-.++.+|+.|+|++|++++ .+|..+..+++|++|+|++|++++. +.+
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l 214 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--REL 214 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhh
Confidence 566667777 67777743 22233333578899999999999998 6778889999999999999999964 446
Q ss_pred cCCC--cccEEcCCCccCccccCC
Q 039290 166 GYLS--LLQELDLSDNQLSGTIPS 187 (1049)
Q Consensus 166 ~~l~--~L~~L~Ls~N~l~g~ip~ 187 (1049)
+.+. +|++|+|++|.+++.+|.
T Consensus 215 ~~l~~l~L~~L~L~~Npl~~~~~~ 238 (267)
T 3rw6_A 215 DKIKGLKLEELWLDGNSLCDTFRD 238 (267)
T ss_dssp GGGTTSCCSEEECTTSTTGGGCSS
T ss_pred hhcccCCcceEEccCCcCccccCc
Confidence 6666 999999999999988874
No 417
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.38 E-value=1.8e-06 Score=93.17 Aligned_cols=76 Identities=14% Similarity=0.116 Sum_probs=61.6
Q ss_pred CCceecCCCcEEEEEEEeCCCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCC---ceeeEEeeeecCCeeEEEEeccCC
Q 039290 765 ENKLLGMGSFGSVYKGVLPDGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHR---NLVKIISSCSNNDFKALVLEYMSN 841 (1049)
Q Consensus 765 ~~~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hp---niv~l~~~~~~~~~~~lv~e~~~~ 841 (1049)
..+.++.|.++.||+++..+|+.++||+...........+.+|++.++.+++. .+++++++. ..++||||+++
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g 94 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEeccc
Confidence 35689999999999999889999999997543333457889999999999764 577787763 35899999999
Q ss_pred CCh
Q 039290 842 GSL 844 (1049)
Q Consensus 842 g~L 844 (1049)
+.+
T Consensus 95 ~~~ 97 (288)
T 3d1u_A 95 RPP 97 (288)
T ss_dssp CCC
T ss_pred CCC
Confidence 875
No 418
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.32 E-value=5.8e-08 Score=97.57 Aligned_cols=122 Identities=15% Similarity=0.142 Sum_probs=69.4
Q ss_pred CchhccCcccCCceeecCc-ccccccCcccccccccccccccCCccCCCCccCcCCCcceeEeeccccccccc----ccc
Q 039290 510 LPACLGNLTSLRDLSLGSN-ALTSIIPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLNALSGV----IPV 584 (1049)
Q Consensus 510 ~p~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~----~p~ 584 (1049)
+...+...++|++|+|++| .+.......+ ...+...+.|++|+|++|.|.+. +..
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l--------------------~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~ 87 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKAC--------------------AEALKTNTYVKKFSIVGTRSNDPVAFALAE 87 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHH--------------------HHHHTTCCSCCEEECTTSCCCHHHHHHHHH
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHH--------------------HHHHHhCCCcCEEECcCCCCChHHHHHHHH
Confidence 3455666777777887777 7764211111 11222334455555555555432 223
Q ss_pred cccCCCcccEEEeecccccCC----ccccccCccCCcEEec--cCccccCC----cccccccccccceeeccCCccc
Q 039290 585 TIGGLQGLQLLSLRYNRLQGP----IPESFGGLKSLNFVDM--SNNNLSGT----IPKSMEALSYLKHLNLSFNQLE 651 (1049)
Q Consensus 585 ~~~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~L--s~N~l~~~----~p~~~~~l~~L~~l~l~~N~l~ 651 (1049)
.+...++|++|+|++|+|++. +...+...++|++|+| ++|.|+.. +...+...++|++|+|++|.+.
T Consensus 88 ~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 88 MLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 344456677777777777642 3455666667777777 66777643 2334445567777777777664
No 419
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.32 E-value=2.7e-06 Score=91.31 Aligned_cols=135 Identities=17% Similarity=0.071 Sum_probs=99.2
Q ss_pred eecCCCcE-EEEEEEeC-CCcEEEEEEeecccCCCHHHHHHHHHHHhhcC-CCceeeEEeeeecCCeeEEEEeccCCCCh
Q 039290 768 LLGMGSFG-SVYKGVLP-DGMEIAAKVFHMEFDGSLESFHAECKVMGSIR-HRNLVKIISSCSNNDFKALVLEYMSNGSL 844 (1049)
Q Consensus 768 ~lg~G~fg-~Vy~a~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-hpniv~l~~~~~~~~~~~lv~e~~~~g~L 844 (1049)
.+..|..+ .||+.... ++..+++|+-... ....+.+|+..++.+. +--+.++++++.+.+..++|||+++|.++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence 45555554 68988754 5678999987533 3567888999998884 33477888999988999999999999888
Q ss_pred hhhhhcCCCccCHHHHHHHHHHHHHHHHHhHcc-----------------------------------------------
Q 039290 845 EKCLYSDNYFLDILQRLKIMIDVASALEYLHFG----------------------------------------------- 877 (1049)
Q Consensus 845 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~----------------------------------------------- 877 (1049)
.+..... ......++.++++.++.||..
T Consensus 108 ~~~~~~~-----~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (272)
T 4gkh_A 108 FQVLEEY-----PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKE 182 (272)
T ss_dssp HHHHHHC-----GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHH
T ss_pred cccccCC-----HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHH
Confidence 7754432 123345667777777777730
Q ss_pred --------CCCCeEEcCCCCCCeeecCCCceEEecccCcee
Q 039290 878 --------YSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKI 910 (1049)
Q Consensus 878 --------~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~ 910 (1049)
....++|+|+.+.||+++.++.+-|+||+.+..
T Consensus 183 l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 183 MHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 012378999999999999887778999998763
No 420
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.31 E-value=4.6e-08 Score=98.35 Aligned_cols=121 Identities=12% Similarity=0.054 Sum_probs=77.9
Q ss_pred CcccccccccceEEeeCc-ccCCc----CchhccCcccCCceeecCcccccccCcccccccccccccccCCccCCCCccC
Q 039290 487 PEDLCHLYRLANLYLGDN-KLSGR----LPACLGNLTSLRDLSLGSNALTSIIPSTLWNLKDILRFNLSSNSLNGSLLPD 561 (1049)
Q Consensus 487 ~~~~~~l~~L~~L~L~~N-~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~ 561 (1049)
...+...+.|++|+|++| .+... +...+...++|++|+|++|++.......+.. .
T Consensus 29 ~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~--------------------~ 88 (185)
T 1io0_A 29 KRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAE--------------------M 88 (185)
T ss_dssp HHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHH--------------------H
T ss_pred HHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHH--------------------H
Confidence 345667789999999999 88743 4455667788999999999887532222211 1
Q ss_pred cCCCcceeEeeccccccccc----ccccccCCCcccEEEe--ecccccCC----ccccccCccCCcEEeccCcccc
Q 039290 562 IGNLKVVIEMDLSLNALSGV----IPVTIGGLQGLQLLSL--RYNRLQGP----IPESFGGLKSLNFVDMSNNNLS 627 (1049)
Q Consensus 562 ~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L--s~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~ 627 (1049)
+...+.|++|+|++|.|++. +...+...+.|+.|+| ++|.|+.. +...+...++|++|+|++|.+.
T Consensus 89 L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 89 LKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 12223344455555555432 3445666677888888 77887753 3345555678888888888875
No 421
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.27 E-value=3.1e-06 Score=92.53 Aligned_cols=136 Identities=15% Similarity=0.128 Sum_probs=96.6
Q ss_pred CceecCCCcEEEEEEEeCCCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCC---ceeeEEeeee-cCCeeEEEEeccCC
Q 039290 766 NKLLGMGSFGSVYKGVLPDGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHR---NLVKIISSCS-NNDFKALVLEYMSN 841 (1049)
Q Consensus 766 ~~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hp---niv~l~~~~~-~~~~~~lv~e~~~~ 841 (1049)
.+.++.|....||+. +..+++|+... ......+.+|+++++.+.+. .+.+++.+.. ..+..++||||++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 457889999999998 57788888532 12346788999999999642 3566777664 45667899999999
Q ss_pred CChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHcc--------------------------------------------
Q 039290 842 GSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFG-------------------------------------------- 877 (1049)
Q Consensus 842 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~-------------------------------------------- 877 (1049)
..+.+.... .++..+...++.++++.++.||..
T Consensus 98 ~~l~~~~~~---~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 174 (306)
T 3tdw_A 98 QILGEDGMA---VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTL 174 (306)
T ss_dssp EECHHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHH
T ss_pred eECchhhhh---hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHH
Confidence 888663211 134555556666666666666621
Q ss_pred -------------CCCCeEEcCCCCCCeeecC---CCc-eEEecccCcee
Q 039290 878 -------------YSTPIVHCDIKPSNVLLNE---SMV-GHLSDFGIAKI 910 (1049)
Q Consensus 878 -------------~~~~ivH~Dlkp~NIl~~~---~~~-~kl~DfGla~~ 910 (1049)
....++|+|++|.||+++. ++. +.|+||+.+..
T Consensus 175 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 175 RFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 1335799999999999987 355 58999998864
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.24 E-value=4.5e-06 Score=93.39 Aligned_cols=77 Identities=10% Similarity=0.087 Sum_probs=58.7
Q ss_pred CCCCceecCCCcEEEEEEEeCCCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCC--ceeeEEeeeecC-CeeEEEEecc
Q 039290 763 FSENKLLGMGSFGSVYKGVLPDGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHR--NLVKIISSCSNN-DFKALVLEYM 839 (1049)
Q Consensus 763 ~~~~~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hp--niv~l~~~~~~~-~~~~lv~e~~ 839 (1049)
....+.++.|....+|+... ++..+++|+.... ..+.+|+.+++.+... .+.++++++.+. +..++||||+
T Consensus 43 ~~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l 116 (362)
T 3ovc_A 43 VSDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRA 116 (362)
T ss_dssp CEEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECC
T ss_pred CceEEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEec
Confidence 34457789999999999886 6788999987432 3688999999988643 356677776654 6689999999
Q ss_pred CCCChh
Q 039290 840 SNGSLE 845 (1049)
Q Consensus 840 ~~g~L~ 845 (1049)
+|.++.
T Consensus 117 ~G~~l~ 122 (362)
T 3ovc_A 117 QGVTLQ 122 (362)
T ss_dssp CSEETT
T ss_pred CCCCcc
Confidence 986654
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.17 E-value=3.5e-06 Score=94.44 Aligned_cols=80 Identities=6% Similarity=-0.051 Sum_probs=57.2
Q ss_pred cee-cCCCcEEEEEEEeC-------CCcEEEEEEeeccc---CCCHHHHHHHHHHHhhcC-C--CceeeEEeeeecC---
Q 039290 767 KLL-GMGSFGSVYKGVLP-------DGMEIAAKVFHMEF---DGSLESFHAECKVMGSIR-H--RNLVKIISSCSNN--- 829 (1049)
Q Consensus 767 ~~l-g~G~fg~Vy~a~~~-------~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~-h--pniv~l~~~~~~~--- 829 (1049)
+.| +.|....+|+.... +++.+++|+..... ......+.+|+.+++.+. + -.+.++++++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 567 88999999998764 26789999875432 111256788888888884 2 3567788877655
Q ss_pred CeeEEEEeccCCCChhh
Q 039290 830 DFKALVLEYMSNGSLEK 846 (1049)
Q Consensus 830 ~~~~lv~e~~~~g~L~~ 846 (1049)
+..++||||++|..+.+
T Consensus 106 g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp SSCEEEEECCCCBCCCB
T ss_pred CCceEEEEecCCCChhh
Confidence 45689999999877654
No 424
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.80 E-value=8.7e-05 Score=84.31 Aligned_cols=75 Identities=12% Similarity=0.100 Sum_probs=50.4
Q ss_pred CceecCCCcEEEEEEEeC-CCcEEEEEEeecccC-------CCHHHHHHHHHHHhhcCC--Cc-eeeEEeeeecCCeeEE
Q 039290 766 NKLLGMGSFGSVYKGVLP-DGMEIAAKVFHMEFD-------GSLESFHAECKVMGSIRH--RN-LVKIISSCSNNDFKAL 834 (1049)
Q Consensus 766 ~~~lg~G~fg~Vy~a~~~-~~~~vavK~~~~~~~-------~~~~~~~~e~~~l~~l~h--pn-iv~l~~~~~~~~~~~l 834 (1049)
.+.+|.|.++.||++... +++.|++|....... ...+++..|+++++.+.. |. +.+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 468999999999999854 568899998653211 234567889999888742 43 4455544 3344689
Q ss_pred EEeccCCC
Q 039290 835 VLEYMSNG 842 (1049)
Q Consensus 835 v~e~~~~g 842 (1049)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999764
No 425
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.80 E-value=1.2e-05 Score=78.51 Aligned_cols=83 Identities=17% Similarity=0.115 Sum_probs=45.6
Q ss_pred ceeEeecccccccccccccccCCCcccEEEeeccc-ccCCccccccCc----cCCcEEeccCcc-ccCCccccccccccc
Q 039290 567 VVIEMDLSLNALSGVIPVTIGGLQGLQLLSLRYNR-LQGPIPESFGGL----KSLNFVDMSNNN-LSGTIPKSMEALSYL 640 (1049)
Q Consensus 567 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l----~~L~~L~Ls~N~-l~~~~p~~~~~l~~L 640 (1049)
.|++||++++.|++..-..+.++++|+.|+|++|. |++.--..++.+ ++|++|+|++|. +|..--..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 45666666665555444555566666666666663 554433444443 256666666653 554333445556666
Q ss_pred ceeeccCCc
Q 039290 641 KHLNLSFNQ 649 (1049)
Q Consensus 641 ~~l~l~~N~ 649 (1049)
+.|++++++
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 666666554
No 426
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.76 E-value=9.8e-05 Score=82.03 Aligned_cols=138 Identities=14% Similarity=0.107 Sum_probs=80.2
Q ss_pred ceecCCCcEEEEEEEeCCCcEEEEEEeecccCCCHHHHHHHHHHHhhcCC--CceeeEEe------eeecCCeeEEEEec
Q 039290 767 KLLGMGSFGSVYKGVLPDGMEIAAKVFHMEFDGSLESFHAECKVMGSIRH--RNLVKIIS------SCSNNDFKALVLEY 838 (1049)
Q Consensus 767 ~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h--pniv~l~~------~~~~~~~~~lv~e~ 838 (1049)
+.++.|..+.||++...+| .+++|+.... ..++..|..+++.+.. -.+.+++. +....+..++||||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 4566677899999987555 5899998642 2445556666665531 12333333 12345678899999
Q ss_pred cCCCChh-----h------h---hhc--C----C-------CccCHHHH-------------------------------
Q 039290 839 MSNGSLE-----K------C---LYS--D----N-------YFLDILQR------------------------------- 860 (1049)
Q Consensus 839 ~~~g~L~-----~------~---l~~--~----~-------~~~~~~~~------------------------------- 860 (1049)
++|..+. + . ++. . . ....|...
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 9986542 0 0 111 0 0 00112110
Q ss_pred HHHHHHHHHHHHHhHc----------cCCCCeEEcCCCCCCeeecCCCceEEecccCce
Q 039290 861 LKIMIDVASALEYLHF----------GYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAK 909 (1049)
Q Consensus 861 ~~i~~~i~~~l~~LH~----------~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~ 909 (1049)
..+...+.+++++++. .....++|||+++.||+++.++.+.|+||+.+.
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 1111223345556652 125789999999999999888899999999875
No 427
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.72 E-value=4.7e-05 Score=87.21 Aligned_cols=80 Identities=10% Similarity=0.049 Sum_probs=50.1
Q ss_pred CCCeEEcCCCCCCeeecCCCceEEecccCceecCCCccccccccccccCcccccccCCC---CcCcccchHHHHHHHHHH
Q 039290 879 STPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEESMRQTKTLGTIGYMAPEYGREG---KVSRKCDVYSYGIMLMET 955 (1049)
Q Consensus 879 ~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~DvwslG~il~el 955 (1049)
...++|||++|.|||++.++ ++++||+.+..-.+.......-......|.+|+..... ......++......+|+.
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL 309 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence 67899999999999999776 99999999875432221111000012346666654321 122334556778888887
Q ss_pred HhCC
Q 039290 956 FTKK 959 (1049)
Q Consensus 956 ltg~ 959 (1049)
+++.
T Consensus 310 y~~~ 313 (420)
T 2pyw_A 310 FNKR 313 (420)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7653
No 428
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.69 E-value=0.00012 Score=79.08 Aligned_cols=78 Identities=14% Similarity=0.118 Sum_probs=58.0
Q ss_pred CCCCceecCCCcEEEEEEEeCCCcEEEEEEeecccCCCHHHHHHHHHHHhhcCC---CceeeEEeeeecCCeeEEEEecc
Q 039290 763 FSENKLLGMGSFGSVYKGVLPDGMEIAAKVFHMEFDGSLESFHAECKVMGSIRH---RNLVKIISSCSNNDFKALVLEYM 839 (1049)
Q Consensus 763 ~~~~~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h---pniv~l~~~~~~~~~~~lv~e~~ 839 (1049)
....+.+|.|..+.||+.+..+|+.|++|+...........+.+|++.++.+.- --+.+++++. ..++||||+
T Consensus 17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l 92 (288)
T 3f7w_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWV 92 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECC
T ss_pred eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEee
Confidence 344578999999999999999999999998765544445678899999998842 2345555542 237899999
Q ss_pred CCCCh
Q 039290 840 SNGSL 844 (1049)
Q Consensus 840 ~~g~L 844 (1049)
+++..
T Consensus 93 ~~~~~ 97 (288)
T 3f7w_A 93 DERPP 97 (288)
T ss_dssp CCCCC
T ss_pred cccCC
Confidence 87643
No 429
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.67 E-value=0.00028 Score=76.53 Aligned_cols=136 Identities=12% Similarity=0.073 Sum_probs=92.5
Q ss_pred CceecCCCcEEEEEEEeCCCcEEEEEEeecccCCCHHHHHHHHHHHhhcC---CCceeeEEeeeecCCeeEEEEeccCCC
Q 039290 766 NKLLGMGSFGSVYKGVLPDGMEIAAKVFHMEFDGSLESFHAECKVMGSIR---HRNLVKIISSCSNNDFKALVLEYMSNG 842 (1049)
Q Consensus 766 ~~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---hpniv~l~~~~~~~~~~~lv~e~~~~g 842 (1049)
.+.++.|....+|+... ++..+++|+.... ....+.+|++.++.+. ...+++++++....+..++||||+++.
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~ 116 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS 116 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence 46799999999999986 5678999987643 3567889999998883 367888999888888899999999987
Q ss_pred Chhh-----------hhhcCCC---------------------ccCHHHHH---HHHH----------------HHHHHH
Q 039290 843 SLEK-----------CLYSDNY---------------------FLDILQRL---KIMI----------------DVASAL 871 (1049)
Q Consensus 843 ~L~~-----------~l~~~~~---------------------~~~~~~~~---~i~~----------------~i~~~l 871 (1049)
.+.. .++.... .-+|.... ++.. .+.+.+
T Consensus 117 ~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l 196 (312)
T 3jr1_A 117 KNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIV 196 (312)
T ss_dssp CCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 6421 1121100 11343322 1111 111111
Q ss_pred -HHhH-ccCCCCeEEcCCCCCCeeecCCCceEEeccc
Q 039290 872 -EYLH-FGYSTPIVHCDIKPSNVLLNESMVGHLSDFG 906 (1049)
Q Consensus 872 -~~LH-~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfG 906 (1049)
..|. ......++|+|+.+.||+++.++ +.|.|+.
T Consensus 197 ~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 197 ADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 2232 12256799999999999999887 8899974
No 430
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.67 E-value=1.2e-05 Score=78.47 Aligned_cols=85 Identities=8% Similarity=0.087 Sum_probs=54.7
Q ss_pred ccccccccCCccCCCCccCcCCCcceeEeecccc-cccccccccccCC----CcccEEEeeccc-ccCCccccccCccCC
Q 039290 543 DILRFNLSSNSLNGSLLPDIGNLKVVIEMDLSLN-ALSGVIPVTIGGL----QGLQLLSLRYNR-LQGPIPESFGGLKSL 616 (1049)
Q Consensus 543 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l----~~L~~L~Ls~N~-l~~~~~~~~~~l~~L 616 (1049)
.|+.||++++.++..-...+..+++|++|+|++| .|++..-..++.+ ++|+.|+|++|. |++.--..+.++++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 4555555555555444455566667777777776 3665444455554 368888888874 776555667778888
Q ss_pred cEEeccCcc-cc
Q 039290 617 NFVDMSNNN-LS 627 (1049)
Q Consensus 617 ~~L~Ls~N~-l~ 627 (1049)
++|+|+++. ++
T Consensus 142 ~~L~L~~c~~It 153 (176)
T 3e4g_A 142 KYLFLSDLPGVK 153 (176)
T ss_dssp CEEEEESCTTCC
T ss_pred CEEECCCCCCCC
Confidence 888888874 44
No 431
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.32 E-value=0.00052 Score=75.33 Aligned_cols=156 Identities=13% Similarity=0.143 Sum_probs=88.3
Q ss_pred ccHHHHHHHhcCCCC-----CceecCCCcEEEEEEEeCCCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCc--eeeEE
Q 039290 751 ISYQDLLRATDGFSE-----NKLLGMGSFGSVYKGVLPDGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRN--LVKII 823 (1049)
Q Consensus 751 ~~~~~~~~~~~~~~~-----~~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpn--iv~l~ 823 (1049)
++.+++.....+|.. .+.++.|....+|+....+| .+++|+.... ...+.+..|+.+++.+...+ +.+++
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~~~ 83 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLPL 83 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCccc
Confidence 455556555556654 24567788899999987655 6888988652 12345667888877764212 33333
Q ss_pred ee------eecCCeeEEEEeccCCCChhh-----h---------hhcC--C--Cc----c---CHHHHHH----------
Q 039290 824 SS------CSNNDFKALVLEYMSNGSLEK-----C---------LYSD--N--YF----L---DILQRLK---------- 862 (1049)
Q Consensus 824 ~~------~~~~~~~~lv~e~~~~g~L~~-----~---------l~~~--~--~~----~---~~~~~~~---------- 862 (1049)
.. ....+..+++|+|++|..+.. + ++.. . .. . .|.....
T Consensus 84 ~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 163 (322)
T 2ppq_A 84 PRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVE 163 (322)
T ss_dssp CBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTS
T ss_pred CCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhh
Confidence 21 122356789999999865321 0 1110 0 00 0 1111000
Q ss_pred --HHHHHHHHHHHhHc----cCCCCeEEcCCCCCCeeecCCCceEEecccCce
Q 039290 863 --IMIDVASALEYLHF----GYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAK 909 (1049)
Q Consensus 863 --i~~~i~~~l~~LH~----~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~ 909 (1049)
+...+.+.+++++. ....+++|+|+.+.||+++.++.+.++||+.+.
T Consensus 164 ~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 164 KGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp TTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 00113344555542 124579999999999999987666899999776
No 432
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.28 E-value=0.00028 Score=65.66 Aligned_cols=60 Identities=22% Similarity=0.309 Sum_probs=41.6
Q ss_pred EEEeeccccc-CCccccccCccCCcEEeccCccccCCcccccccccccceeeccCCcccccCC
Q 039290 594 LLSLRYNRLQ-GPIPESFGGLKSLNFVDMSNNNLSGTIPKSMEALSYLKHLNLSFNQLEGEIP 655 (1049)
Q Consensus 594 ~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~p 655 (1049)
.++.++++++ ..+|..+. ++|++|||++|+|+...+..|..+++|+.|+|++|+|.|.+-
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC~ 72 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDCR 72 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSGG
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccCc
Confidence 5667777776 23443322 357788888888886556667778888888888888887664
No 433
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.13 E-value=0.0013 Score=71.22 Aligned_cols=132 Identities=11% Similarity=0.103 Sum_probs=77.6
Q ss_pred CCCCceecCCCcEEEEEEEeCCCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCce-eeEEeeeecCCeeEEEEecc-C
Q 039290 763 FSENKLLGMGSFGSVYKGVLPDGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRNL-VKIISSCSNNDFKALVLEYM-S 840 (1049)
Q Consensus 763 ~~~~~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpni-v~l~~~~~~~~~~~lv~e~~-~ 840 (1049)
+.-.+.++.|....+|+. ..+++|+....... .....+|+.+++.+...++ .+++++.. +.-++|+||+ +
T Consensus 20 ~~~i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~~--~~~~~v~e~i~~ 91 (301)
T 3dxq_A 20 YTGPLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVDP--ATGVMVTRYIAG 91 (301)
T ss_dssp CCSCEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEECT--TTCCEEEECCTT
T ss_pred ccceeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEEC--CCCEEEEeecCC
Confidence 333678999999999998 56888887643221 1223567777777642222 46665543 3346899999 6
Q ss_pred CCChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHc--------------------------------------------
Q 039290 841 NGSLEKCLYSDNYFLDILQRLKIMIDVASALEYLHF-------------------------------------------- 876 (1049)
Q Consensus 841 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~-------------------------------------------- 876 (1049)
|.++...-... ...++.++++.|+-+|.
T Consensus 92 g~~l~~~~~~~--------~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 163 (301)
T 3dxq_A 92 AQTMSPEKFKT--------RPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVR 163 (301)
T ss_dssp CEECCHHHHHH--------STTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHH
T ss_pred CccCCHhhHhh--------hHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHH
Confidence 54443200000 00122222222222321
Q ss_pred ------cCCCCeEEcCCCCCCeeecCCCceEEecccCceec
Q 039290 877 ------GYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKIL 911 (1049)
Q Consensus 877 ------~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~ 911 (1049)
.....++|+|+.+.||+ ..++.+.++||..+..-
T Consensus 164 ~~l~~~~~~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~g 203 (301)
T 3dxq_A 164 SALAAHPLPLAACHCDPLCENFL-DTGERMWIVDWEYSGMN 203 (301)
T ss_dssp HHHHSSCCCCEEECSCCCGGGEE-ECSSCEEECCCTTCEEE
T ss_pred HHHHhcCCCceeeccCCCcCCEE-ECCCCEEEEecccccCC
Confidence 11345799999999999 55667899999988753
No 434
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.05 E-value=0.00012 Score=72.90 Aligned_cols=88 Identities=20% Similarity=0.143 Sum_probs=51.4
Q ss_pred cCCCcceeEeecccccccccc----cccccCCCcccEEEeecccccCC----ccccccCccCCcEEeccCc---cccC--
Q 039290 562 IGNLKVVIEMDLSLNALSGVI----PVTIGGLQGLQLLSLRYNRLQGP----IPESFGGLKSLNFVDMSNN---NLSG-- 628 (1049)
Q Consensus 562 ~~~l~~L~~L~Ls~N~l~~~~----p~~~~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N---~l~~-- 628 (1049)
+...+.|+.|+|++|+|.+.. ...+..-+.|+.|+|++|+|++. +-+++..-+.|++|+|++| .+..
T Consensus 66 L~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g 145 (197)
T 1pgv_A 66 ACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQV 145 (197)
T ss_dssp HTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHH
T ss_pred HhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHH
Confidence 344455666666666665332 23344556777777777777742 3345555567888888765 3332
Q ss_pred --CcccccccccccceeeccCCc
Q 039290 629 --TIPKSMEALSYLKHLNLSFNQ 649 (1049)
Q Consensus 629 --~~p~~~~~l~~L~~l~l~~N~ 649 (1049)
.+-..+..-+.|+.|+++.|.
T Consensus 146 ~~~ia~aL~~N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 146 EMDMMMAIEENESLLRVGISFAS 168 (197)
T ss_dssp HHHHHHHHHHCSSCCEEECCCCC
T ss_pred HHHHHHHHHhCCCcCeEeccCCC
Confidence 133445555677777776554
No 435
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.01 E-value=0.0042 Score=68.33 Aligned_cols=140 Identities=14% Similarity=0.063 Sum_probs=74.2
Q ss_pred ceecCCCcEE-EEEEEeCCCcEEEEEEeecccCCCHHHHHHHHHHHhhcC-C-CceeeEEeeeecCCeeEEEEeccCCCC
Q 039290 767 KLLGMGSFGS-VYKGVLPDGMEIAAKVFHMEFDGSLESFHAECKVMGSIR-H-RNLVKIISSCSNNDFKALVLEYMSNGS 843 (1049)
Q Consensus 767 ~~lg~G~fg~-Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h-pniv~l~~~~~~~~~~~lv~e~~~~g~ 843 (1049)
+.++.|+... +|+....++..+++|....... +.+..|+.+++.+. + -.+.+++.+..+.+ +++||++.+..
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~ 98 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL 98 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence 3455554444 6677664477888876543321 33455666666663 2 23556666644333 68999997766
Q ss_pred hhhhhhcCC-------------------------CccCHHHHH-------H-H------------HHHHHHHHHHhH---
Q 039290 844 LEKCLYSDN-------------------------YFLDILQRL-------K-I------------MIDVASALEYLH--- 875 (1049)
Q Consensus 844 L~~~l~~~~-------------------------~~~~~~~~~-------~-i------------~~~i~~~l~~LH--- 875 (1049)
+.+.+.... ..++..... . + ...+.+.++.+.
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 654332110 011111100 0 0 001111222221
Q ss_pred ccCCCCeEEcCCCCCCeeecCC----CceEEecccCceec
Q 039290 876 FGYSTPIVHCDIKPSNVLLNES----MVGHLSDFGIAKIL 911 (1049)
Q Consensus 876 ~~~~~~ivH~Dlkp~NIl~~~~----~~~kl~DfGla~~~ 911 (1049)
......++|||+.+.|||++.+ +.+.|+||+.+..-
T Consensus 179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 1125679999999999999874 68899999988754
No 436
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.00 E-value=0.0024 Score=71.10 Aligned_cols=140 Identities=13% Similarity=0.124 Sum_probs=84.0
Q ss_pred CceecCCCcEEEEEEEeC--------CCcEEEEEEeecccCCCHHHHHHHHHHHhhcC-CCceeeEEeeeecCCeeEEEE
Q 039290 766 NKLLGMGSFGSVYKGVLP--------DGMEIAAKVFHMEFDGSLESFHAECKVMGSIR-HRNLVKIISSCSNNDFKALVL 836 (1049)
Q Consensus 766 ~~~lg~G~fg~Vy~a~~~--------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-hpniv~l~~~~~~~~~~~lv~ 836 (1049)
.+.+..|-...+|++... +++.|++|+.... ........+|.++++.+. +.-..++++++.+ .+||
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~ 129 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE 129 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence 356777888999999864 3578999986332 234566778999998884 3334667766654 3899
Q ss_pred eccCCCChhhh-----------------hhcC----CCccC--HHHHHHHHHHHHH-------------------HHHHh
Q 039290 837 EYMSNGSLEKC-----------------LYSD----NYFLD--ILQRLKIMIDVAS-------------------ALEYL 874 (1049)
Q Consensus 837 e~~~~g~L~~~-----------------l~~~----~~~~~--~~~~~~i~~~i~~-------------------~l~~L 874 (1049)
||++|..+..- ++.- .+... +.++.++..++.. .++.+
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 209 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL 209 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence 99998655311 1111 11111 3444444433321 12222
Q ss_pred ----Hc-cCCCCeEEcCCCCCCeeecCC----CceEEecccCcee
Q 039290 875 ----HF-GYSTPIVHCDIKPSNVLLNES----MVGHLSDFGIAKI 910 (1049)
Q Consensus 875 ----H~-~~~~~ivH~Dlkp~NIl~~~~----~~~kl~DfGla~~ 910 (1049)
.. .....++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 21 123468899999999999876 7899999998763
No 437
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.99 E-value=0.0018 Score=73.97 Aligned_cols=72 Identities=14% Similarity=0.150 Sum_probs=50.7
Q ss_pred ceecCCCcEEEEEEEeCC--------CcEEEEEEeecccCCCHHHHHHHHHHHhhcC-CCceeeEEeeeecCCeeEEEEe
Q 039290 767 KLLGMGSFGSVYKGVLPD--------GMEIAAKVFHMEFDGSLESFHAECKVMGSIR-HRNLVKIISSCSNNDFKALVLE 837 (1049)
Q Consensus 767 ~~lg~G~fg~Vy~a~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-hpniv~l~~~~~~~~~~~lv~e 837 (1049)
+.|+.|....||++...+ +..+++|+.... ...+.+.+|..+++.+. +.-..++++.+.+ .+|+|
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e 152 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEE 152 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEEC
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEE
Confidence 578889999999998753 578999988432 22256678999988884 3333567766543 38999
Q ss_pred ccCCCCh
Q 039290 838 YMSNGSL 844 (1049)
Q Consensus 838 ~~~~g~L 844 (1049)
|++|.++
T Consensus 153 ~l~G~~l 159 (429)
T 1nw1_A 153 YIPSRPL 159 (429)
T ss_dssp CCCEEEC
T ss_pred EeCCccc
Confidence 9987443
No 438
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.97 E-value=0.0032 Score=69.14 Aligned_cols=157 Identities=11% Similarity=0.103 Sum_probs=89.9
Q ss_pred cccHHHHHHHhcCCC-----CCceecCCCcEEEEEEEeCCCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCC--ceeeE
Q 039290 750 RISYQDLLRATDGFS-----ENKLLGMGSFGSVYKGVLPDGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHR--NLVKI 822 (1049)
Q Consensus 750 ~~~~~~~~~~~~~~~-----~~~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hp--niv~l 822 (1049)
.++.+++......|. ..+.++ |....||+....+|+.+++|..... ....+.+..|..+++.+... .++++
T Consensus 10 ~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~-~~~~~~~~~E~~~~~~L~~~g~~vp~~ 87 (328)
T 1zyl_A 10 TLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPE-RWTADQILEEHQFALQLVNDEVPVAAP 87 (328)
T ss_dssp CCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTT-TSCHHHHHHHHHHHHHHHHTTCSBCCC
T ss_pred CCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCC-CCCHHHHHHHHHHHHHHHHcCCeecce
Confidence 344444444443332 234677 8888999988777888999998633 22456777888888877421 23444
Q ss_pred Eee-----eecCCeeEEEEeccCCCChh-----hh---------hhc----C----CCccCHHHH----HHH--------
Q 039290 823 ISS-----CSNNDFKALVLEYMSNGSLE-----KC---------LYS----D----NYFLDILQR----LKI-------- 863 (1049)
Q Consensus 823 ~~~-----~~~~~~~~lv~e~~~~g~L~-----~~---------l~~----~----~~~~~~~~~----~~i-------- 863 (1049)
+.. ....+..+++|||++|..+. .+ ++. . ....+.... ..+
T Consensus 88 ~~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 167 (328)
T 1zyl_A 88 VAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIP 167 (328)
T ss_dssp CCBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSC
T ss_pred eecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCC
Confidence 433 12245667899999875432 11 110 0 011222111 000
Q ss_pred -------HHHHHHHHHHhHc----cCCCCeEEcCCCCCCeeecCCCceEEecccCcee
Q 039290 864 -------MIDVASALEYLHF----GYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKI 910 (1049)
Q Consensus 864 -------~~~i~~~l~~LH~----~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~ 910 (1049)
...+.+.++.+.. .....++|||+++.||+++ + .+.++||+.+..
T Consensus 168 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 168 SGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 1111112222221 1245688999999999999 4 899999998764
No 439
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.93 E-value=0.0001 Score=73.31 Aligned_cols=116 Identities=15% Similarity=0.090 Sum_probs=63.5
Q ss_pred cccccceEEeeCc-ccCCc----CchhccCcccCCceeecCcccccccCcccccccccccccccCCccCCCCccCcCCCc
Q 039290 492 HLYRLANLYLGDN-KLSGR----LPACLGNLTSLRDLSLGSNALTSIIPSTLWNLKDILRFNLSSNSLNGSLLPDIGNLK 566 (1049)
Q Consensus 492 ~l~~L~~L~L~~N-~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 566 (1049)
+-+.|++|+|++| .|... +..++..-+.|+.|+|++|++.......+ .+.+...+
T Consensus 39 ~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~al--------------------A~aL~~N~ 98 (197)
T 1pgv_A 39 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGL--------------------IELIETSP 98 (197)
T ss_dssp TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTH--------------------HHHHHHCS
T ss_pred cCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHH--------------------HHHHhcCC
Confidence 3456666777664 55421 33444555566666666666654322221 22233345
Q ss_pred ceeEeeccccccccc----ccccccCCCcccEEEeecc---cccC----CccccccCccCCcEEeccCcccc
Q 039290 567 VVIEMDLSLNALSGV----IPVTIGGLQGLQLLSLRYN---RLQG----PIPESFGGLKSLNFVDMSNNNLS 627 (1049)
Q Consensus 567 ~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N---~l~~----~~~~~~~~l~~L~~L~Ls~N~l~ 627 (1049)
.|++|+|+.|.|.+. +...+..-+.|+.|+|++| .+.. .+.+.+..-+.|+.|+++.|.+.
T Consensus 99 tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 99 SLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp SCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred ccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 566666666666532 2234455566888888765 3332 23445566678888888877653
No 440
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.65 E-value=0.0059 Score=69.91 Aligned_cols=73 Identities=15% Similarity=0.151 Sum_probs=48.0
Q ss_pred ceecCCCcEEEEEEEeCC-CcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCce-eeEEeeeecCCeeEEEEeccCCCCh
Q 039290 767 KLLGMGSFGSVYKGVLPD-GMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRNL-VKIISSCSNNDFKALVLEYMSNGSL 844 (1049)
Q Consensus 767 ~~lg~G~fg~Vy~a~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpni-v~l~~~~~~~~~~~lv~e~~~~g~L 844 (1049)
+.|+.|-...+|++...+ +..+++|+....... ..+-.+|..+++.+...++ .++++++. + ..||||++|.++
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~-~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE-IINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYAL 188 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCS-CSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEEC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhh-hcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCccC
Confidence 578889999999999765 578899987533221 1122578888888864433 56777663 2 359999987544
No 441
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.60 E-value=0.0055 Score=60.99 Aligned_cols=102 Identities=15% Similarity=0.061 Sum_probs=67.6
Q ss_pred ChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEcCCCCCCeeecCCCceEEecccCceecCCCcccccccc
Q 039290 843 SLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHCDIKPSNVLLNESMVGHLSDFGIAKILGKEESMRQTKT 922 (1049)
Q Consensus 843 ~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~~~~~~~~ 922 (1049)
+|.+.+...+.+++++++|.+++|.+++|.-.-. .+.-..+=+.|..|++..+|.|...+ +.+.
T Consensus 34 SL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~--~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~------------- 97 (229)
T 2yle_A 34 SLEEILRLYNQPINEEQAWAVCYQCCGSLRAAAR--RRQPRHRVRSAAQIRVWRDGAVTLAP-AADD------------- 97 (229)
T ss_dssp EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCSGGGEEEETTSCEEECC-C----------------
T ss_pred cHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhh--cccCCceecCCcceEEecCCceeccc-cccc-------------
Confidence 7999999988999999999999999999887721 11111222356888888888888753 1110
Q ss_pred ccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCC
Q 039290 923 LGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKP 961 (1049)
Q Consensus 923 ~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p 961 (1049)
.....+.|||... ...+.+.=|||+|+++|.-+--..|
T Consensus 98 ~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp ---------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 1123466888764 3556788999999999998874443
No 442
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.50 E-value=0.0024 Score=59.23 Aligned_cols=57 Identities=19% Similarity=0.205 Sum_probs=43.2
Q ss_pred Eeeccccccc-ccccccccCCCcccEEEeecccccCCccccccCccCCcEEeccCccccC
Q 039290 570 EMDLSLNALS-GVIPVTIGGLQGLQLLSLRYNRLQGPIPESFGGLKSLNFVDMSNNNLSG 628 (1049)
Q Consensus 570 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 628 (1049)
.+|.+++.++ ..+|..+. .+|+.|+|++|+|+...+..|..+++|++|+|++|.+..
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~C 69 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRC 69 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeec
Confidence 5666666665 23454333 468899999999998778888999999999999998864
No 443
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.37 E-value=0.0052 Score=68.72 Aligned_cols=73 Identities=14% Similarity=0.225 Sum_probs=44.4
Q ss_pred ceecCCCcEEEEEEEeCC---------CcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCc-eeeEEeeeecCCeeEEEE
Q 039290 767 KLLGMGSFGSVYKGVLPD---------GMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRN-LVKIISSCSNNDFKALVL 836 (1049)
Q Consensus 767 ~~lg~G~fg~Vy~a~~~~---------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpn-iv~l~~~~~~~~~~~lv~ 836 (1049)
+.++.|....+|+....+ +..+++|+....... ..+...|.++++.+...+ +.++++.. . -++||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~ 113 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIE 113 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEE
Confidence 567888888999998654 268888987543211 122467888888774223 44666544 2 26899
Q ss_pred eccCCCCh
Q 039290 837 EYMSNGSL 844 (1049)
Q Consensus 837 e~~~~g~L 844 (1049)
||++|..+
T Consensus 114 e~i~G~~l 121 (369)
T 3c5i_A 114 EWLYGDPL 121 (369)
T ss_dssp ECCCSEEC
T ss_pred EEecCCcC
Confidence 99987543
No 444
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.35 E-value=0.025 Score=62.14 Aligned_cols=67 Identities=9% Similarity=0.077 Sum_probs=43.6
Q ss_pred CCCcEEEEEEEeCCCcEEEEEEeecccCCCHHHHHHHHHHHhhcC---CCceeeEEee------eecCCeeEEEEeccCC
Q 039290 771 MGSFGSVYKGVLPDGMEIAAKVFHMEFDGSLESFHAECKVMGSIR---HRNLVKIISS------CSNNDFKALVLEYMSN 841 (1049)
Q Consensus 771 ~G~fg~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---hpniv~l~~~------~~~~~~~~lv~e~~~~ 841 (1049)
.|....||+....+| .+++|+...... .+|+.+++.+. -|.+++++.. ....+..+++|||++|
T Consensus 33 ~g~~N~vy~v~~~~g-~~vLK~~~~~~~------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~G 105 (339)
T 3i1a_A 33 ADTNAFAYQADSESK-SYFIKLKYGYHD------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIHA 105 (339)
T ss_dssp SCSSCEEEEEECSSC-EEEEEEEECSSC------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCCC
T ss_pred CccccceEEEEeCCC-CEEEEEecCccc------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccCC
Confidence 334689999997777 999998765431 34555555552 2334555432 2335677999999998
Q ss_pred CCh
Q 039290 842 GSL 844 (1049)
Q Consensus 842 g~L 844 (1049)
..+
T Consensus 106 ~~~ 108 (339)
T 3i1a_A 106 PNG 108 (339)
T ss_dssp CBT
T ss_pred CcC
Confidence 755
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.09 E-value=0.015 Score=65.00 Aligned_cols=139 Identities=16% Similarity=0.157 Sum_probs=82.7
Q ss_pred ceecCCCcEEEEEEEeCC--------CcEEEEEEeecccCC------------------CHHHHHHHHHHHhhcC-CCce
Q 039290 767 KLLGMGSFGSVYKGVLPD--------GMEIAAKVFHMEFDG------------------SLESFHAECKVMGSIR-HRNL 819 (1049)
Q Consensus 767 ~~lg~G~fg~Vy~a~~~~--------~~~vavK~~~~~~~~------------------~~~~~~~e~~~l~~l~-hpni 819 (1049)
+.+..|-...+|++...+ +..|.+++.-...+. ..+....|..+++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 567778889999998754 368888887432211 0112335888888874 4445
Q ss_pred eeEEeeeecCCeeEEEEeccCCCChhh--h---------------hhcC----CCccC--HHHHHHHHHHHH--------
Q 039290 820 VKIISSCSNNDFKALVLEYMSNGSLEK--C---------------LYSD----NYFLD--ILQRLKIMIDVA-------- 868 (1049)
Q Consensus 820 v~l~~~~~~~~~~~lv~e~~~~g~L~~--~---------------l~~~----~~~~~--~~~~~~i~~~i~-------- 868 (1049)
.++++++.. .+|+||++|.+|.. + ++.. ..... +.++.++..++.
T Consensus 138 Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 677777653 28999999755421 1 0111 11112 223333332221
Q ss_pred --------------HHH----HHhHc-cCCCCeEEcCCCCCCeeecCC------CceEEecccCce
Q 039290 869 --------------SAL----EYLHF-GYSTPIVHCDIKPSNVLLNES------MVGHLSDFGIAK 909 (1049)
Q Consensus 869 --------------~~l----~~LH~-~~~~~ivH~Dlkp~NIl~~~~------~~~kl~DfGla~ 909 (1049)
.-+ +++.. .....++|+|+.+.||+++.+ +.+.++||..|.
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 112 22321 224468899999999999876 789999998875
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.42 E-value=0.021 Score=64.50 Aligned_cols=74 Identities=12% Similarity=0.143 Sum_probs=49.2
Q ss_pred CceecCCCcEEEEEEEeCC--------CcEEEEEEeecccCCCHHHHHHHHHHHhhcC-CCceeeEEeeeecCCeeEEEE
Q 039290 766 NKLLGMGSFGSVYKGVLPD--------GMEIAAKVFHMEFDGSLESFHAECKVMGSIR-HRNLVKIISSCSNNDFKALVL 836 (1049)
Q Consensus 766 ~~~lg~G~fg~Vy~a~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-hpniv~l~~~~~~~~~~~lv~ 836 (1049)
.+.+..|-...+|+....+ +..|++|+...... ...+..+|.++++.+. +.-..++++.+. -+.||
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~-~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~ 149 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVG-KFYDSKVELDVFRYLSNINIAPNIIADFP----EGRIE 149 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcc-hhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEE
Confidence 3577788889999998753 67899998754321 2223467888888774 333455665432 26899
Q ss_pred eccCCCCh
Q 039290 837 EYMSNGSL 844 (1049)
Q Consensus 837 e~~~~g~L 844 (1049)
||++|..+
T Consensus 150 efI~G~~l 157 (424)
T 3mes_A 150 EFIDGEPL 157 (424)
T ss_dssp ECCCSEEC
T ss_pred EEeCCccC
Confidence 99998654
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=92.45 E-value=0.37 Score=54.14 Aligned_cols=30 Identities=30% Similarity=0.361 Sum_probs=25.1
Q ss_pred CeEEcCCCCCCeee------cCCCceEEecccCcee
Q 039290 881 PIVHCDIKPSNVLL------NESMVGHLSDFGIAKI 910 (1049)
Q Consensus 881 ~ivH~Dlkp~NIl~------~~~~~~kl~DfGla~~ 910 (1049)
.++|+|+.+.||++ +++..++++||-+|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 35699999999999 4567899999998864
No 448
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=78.75 E-value=4.1 Score=40.49 Aligned_cols=130 Identities=11% Similarity=0.194 Sum_probs=84.5
Q ss_pred HHHHHhhcCCCceeeEEeeeecCCeeEEEEeccCCC-ChhhhhhcCCCccCHHHHHHHHHHHHHHHHHhHccCCCCeEEc
Q 039290 807 ECKVMGSIRHRNLVKIISSCSNNDFKALVLEYMSNG-SLEKCLYSDNYFLDILQRLKIMIDVASALEYLHFGYSTPIVHC 885 (1049)
Q Consensus 807 e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g-~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~ 885 (1049)
|+..+.. .||+.+.. .+-.+.+.+.+.++.-+.+ ++.. +. ..+...+++++..|+...++++ .=+|-
T Consensus 36 el~LL~~-~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-ik----~~~~~eKlr~l~ni~~l~~~~~-----~r~tf 103 (215)
T 4ann_A 36 LMYLLEQ-HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-IK----SFTKNEKLRYLLNIKNLEEVNR-----TRYTF 103 (215)
T ss_dssp GGGGGGS-CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-GG----GSCHHHHHHHHHHGGGGGGGGG-----SSEEC
T ss_pred HHHHHhc-cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-HH----hcCHHHHHHHHHHHHHHHHHhc-----CceEE
Confidence 3444432 68888876 4666667666656554422 3332 22 3678899999999998886555 24678
Q ss_pred CCCCCCeeecCCCceEEecccCceecCCCccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCcc
Q 039290 886 DIKPSNVLLNESMVGHLSDFGIAKILGKEESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDEI 965 (1049)
Q Consensus 886 Dlkp~NIl~~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~~ 965 (1049)
-+.|+|++++.++.+++.=.|+...+ +|. ..+...=.-.+=|++..+++++..|+..
T Consensus 104 ~L~P~NL~f~~~~~p~i~~RGik~~l------------------~P~-----~~~ee~fL~qyKAliiall~~K~~Fe~l 160 (215)
T 4ann_A 104 VLAPDELFFTRDGLPIAKTRGLQNVV------------------DPL-----PVSEAEFLTRYKALVICAFNEKQSFDAL 160 (215)
T ss_dssp CCSGGGEEECTTSCEEESCCEETTTB------------------SCC-----CCCHHHHHHHHHHHHHHHHCTTCCHHHH
T ss_pred EEecceEEEcCCCCEEEEEccCccCC------------------CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHHHH
Confidence 89999999999999999766653322 121 1122222334678999999999998775
Q ss_pred ccccch
Q 039290 966 FAGEMS 971 (1049)
Q Consensus 966 ~~~~~~ 971 (1049)
..|...
T Consensus 161 ~~G~le 166 (215)
T 4ann_A 161 VEGNLE 166 (215)
T ss_dssp HHSCGG
T ss_pred HcChHh
Confidence 555443
No 449
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=75.61 E-value=1.3 Score=31.38 Aligned_cols=8 Identities=38% Similarity=0.646 Sum_probs=3.1
Q ss_pred HHHHHHHH
Q 039290 716 TAKLVRRR 723 (1049)
Q Consensus 716 ~~~~~rrr 723 (1049)
++++.|+|
T Consensus 31 ~~~~~RRr 38 (44)
T 2ks1_B 31 IGLFMRRR 38 (44)
T ss_dssp HHHHHHTT
T ss_pred HHHHhhhh
Confidence 33344433
No 450
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=64.90 E-value=0.75 Score=52.49 Aligned_cols=60 Identities=10% Similarity=0.027 Sum_probs=17.2
Q ss_pred CCceecCCCcEEEEEEEeCC-CcEEEE------EEeeccc--CCCHHHHHHHHHHHhhcCCCceeeEEeeee
Q 039290 765 ENKLLGMGSFGSVYKGVLPD-GMEIAA------KVFHMEF--DGSLESFHAECKVMGSIRHRNLVKIISSCS 827 (1049)
Q Consensus 765 ~~~~lg~G~fg~Vy~a~~~~-~~~vav------K~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~l~~~~~ 827 (1049)
..+.+| ||.||+|.+.. ..+||+ |..+... ......+.+|..+++..+|||+++.+++..
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 345666 99999999754 467888 6654322 222346788899999999999999987653
No 451
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=63.63 E-value=15 Score=36.56 Aligned_cols=115 Identities=12% Similarity=0.132 Sum_probs=76.3
Q ss_pred CCCceeeEEeeeecCCeeEEEEeccCCC-ChhhhhhcCCCccCHHHHHHHHHHHHHHHH-HhHccCCCCeEEcCCCCCCe
Q 039290 815 RHRNLVKIISSCSNNDFKALVLEYMSNG-SLEKCLYSDNYFLDILQRLKIMIDVASALE-YLHFGYSTPIVHCDIKPSNV 892 (1049)
Q Consensus 815 ~hpniv~l~~~~~~~~~~~lv~e~~~~g-~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~-~LH~~~~~~ivH~Dlkp~NI 892 (1049)
.||++ -..+-.+++.+.+.++.-+++ +... +. ..+...+++++..++...+ +++ .-+|--+.|+|+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~-i~----~~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P~NL 115 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAA-IR----KTTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCPENL 115 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHH-HH----TSCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCGGGE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHH-HH----hcCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeCceE
Confidence 67888 444556777777777765443 3332 22 3678889999998887665 444 456788999999
Q ss_pred eecCCCceEEecccCceecCCCccccccccccccCcccccccCCCCcCcccchHHHHHHHHHHHhCCCCCCc
Q 039290 893 LLNESMVGHLSDFGIAKILGKEESMRQTKTLGTIGYMAPEYGREGKVSRKCDVYSYGIMLMETFTKKKPTDE 964 (1049)
Q Consensus 893 l~~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~elltg~~p~~~ 964 (1049)
+++.++.+++.-.|+-.. ++|.- .+...=.-.+=|++..++.++..|+.
T Consensus 116 ~f~~~~~p~i~hRGi~~~------------------lpP~e-----~~ee~fl~qyKali~all~~K~~Fe~ 164 (219)
T 4ano_A 116 MFNRALEPFFLHVGVKES------------------LPPDE-----WDDERLLREVKATVLALTEGEYRFDE 164 (219)
T ss_dssp EECTTCCEEESCCEETTT------------------BSSCS-----CCHHHHHHHHHHHHHHHTTCSSCHHH
T ss_pred EEeCCCcEEEEEcCCccc------------------CCCCC-----CCHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 999999999987765332 22221 11111123466888899998888765
No 452
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=57.04 E-value=6.1 Score=27.98 Aligned_cols=8 Identities=50% Similarity=0.584 Sum_probs=3.1
Q ss_pred HHHHHHHH
Q 039290 716 TAKLVRRR 723 (1049)
Q Consensus 716 ~~~~~rrr 723 (1049)
+++++|+|
T Consensus 30 ~~~~~RRR 37 (44)
T 2l2t_A 30 FAVYVRRK 37 (44)
T ss_dssp HHHHHHTT
T ss_pred HHHHhhhh
Confidence 33343433
No 453
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=43.75 E-value=1.9e+02 Score=34.19 Aligned_cols=25 Identities=28% Similarity=0.206 Sum_probs=22.9
Q ss_pred cCCCCCCeeecCCCceEEecccCce
Q 039290 885 CDIKPSNVLLNESMVGHLSDFGIAK 909 (1049)
Q Consensus 885 ~Dlkp~NIl~~~~~~~kl~DfGla~ 909 (1049)
+|=.++|||++.+|.+.-+|||.+.
T Consensus 551 GDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 551 GDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred CCCCCcceEEeCCCCEEEEeehhhh
Confidence 5888999999999999999999875
No 454
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=40.73 E-value=2.5e+02 Score=32.58 Aligned_cols=82 Identities=12% Similarity=0.137 Sum_probs=48.9
Q ss_pred eeEEeeeecCCeeEEEEeccCCCChhhhhhcCCC----------------ccCHHHHHHHHHHHH--HHHHHhHccCCCC
Q 039290 820 VKIISSCSNNDFKALVLEYMSNGSLEKCLYSDNY----------------FLDILQRLKIMIDVA--SALEYLHFGYSTP 881 (1049)
Q Consensus 820 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~----------------~~~~~~~~~i~~~i~--~~l~~LH~~~~~~ 881 (1049)
++.+.+...+.... +.|++++.++.+.+...+. ...+..+..++..+| +.+.|+= |
T Consensus 402 i~~Y~Vipls~~~G-lIE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YIL-----G 475 (614)
T 3ls8_A 402 LTPYKVLATSTKHG-FMQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYIL-----G 475 (614)
T ss_dssp CCCCCEEESSSSEE-EEECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHH-----T
T ss_pred eeccEEEEecCCCc-eEEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheee-----e
Confidence 44455555555444 4677776555554432110 112344455555443 2444444 2
Q ss_pred eEEcCCCCCCeeecCCCceEEecccCce
Q 039290 882 IVHCDIKPSNVLLNESMVGHLSDFGIAK 909 (1049)
Q Consensus 882 ivH~Dlkp~NIl~~~~~~~kl~DfGla~ 909 (1049)
| +|=.++|||++.+|++.=+|||...
T Consensus 476 i--gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 476 V--GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp C--CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred c--cCCCCcceeEcCCCCEeeeehHHhh
Confidence 2 5778999999999999999999874
No 455
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=30.96 E-value=53 Score=23.27 Aligned_cols=30 Identities=27% Similarity=0.313 Sum_probs=19.5
Q ss_pred eehhHHHHHHHHHHHHHHHHHHHhhhhhcc
Q 039290 701 IVLPLVSALTMIVVLTAKLVRRRRRRRRRQ 730 (1049)
Q Consensus 701 i~~~~v~~~~~~~~l~~~~~rrrrr~~~~~ 730 (1049)
|++.++.++++++++....+...||+++++
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~~RRr~~~~ 42 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLFMRRRHIVR 42 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHTTTCCS
T ss_pred EEeehhHHHHHHHHHHHHHHHHhhhhHhhc
Confidence 455556666666666677777777776544
No 456
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=28.87 E-value=56 Score=23.13 Aligned_cols=31 Identities=19% Similarity=0.361 Sum_probs=19.4
Q ss_pred eehhHHHHHHHHHHHHHHHHHHHhhhhhccc
Q 039290 701 IVLPLVSALTMIVVLTAKLVRRRRRRRRRQK 731 (1049)
Q Consensus 701 i~~~~v~~~~~~~~l~~~~~rrrrr~~~~~~ 731 (1049)
|++.++.++++++++....+...||++++++
T Consensus 12 IA~gVVgGv~~v~ii~~~~~~~~RRRr~~~k 42 (44)
T 2l2t_A 12 IAAGVIGGLFILVIVGLTFAVYVRRKSIKKK 42 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCSSCC
T ss_pred EEEeehHHHHHHHHHHHHHHHHhhhhhhhhc
Confidence 4455555566666666667777777766544
No 457
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=26.74 E-value=1e+02 Score=26.21 Aligned_cols=44 Identities=14% Similarity=0.061 Sum_probs=19.9
Q ss_pred ccccCCccccCcCCCcceEeeccccCCCCCcccccccccceEEee
Q 039290 458 LTGTIPVTLGRLQKLQGLYLQNNKLEGSIPEDLCHLYRLANLYLG 502 (1049)
Q Consensus 458 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 502 (1049)
++.+-..+|.++.+|+.+.+-.+ ++.+-...|.++.+|+.+.+.
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~ 51 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILT 51 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEEC
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEc
Confidence 33333445555555555555433 222333344444444444443
No 458
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=25.91 E-value=1.4e+02 Score=25.19 Aligned_cols=48 Identities=13% Similarity=0.056 Sum_probs=37.6
Q ss_pred ccccCCCCCCCCCCCccEEEccCCcccccCCccccCcCCCcceEeeccc
Q 039290 433 NISGGIPKELGNINNLTVIRLGNNELTGTIPVTLGRLQKLQGLYLQNNK 481 (1049)
Q Consensus 433 ~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 481 (1049)
.++.+-..+|.++.+|+.+.+-.+ ++.+...+|.++.+|+.+.+.+..
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~~ 54 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGED 54 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCSC
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCCC
Confidence 445556678899999999999875 454667899999999999997643
No 459
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=23.27 E-value=1.1e+02 Score=32.33 Aligned_cols=135 Identities=17% Similarity=0.107 Sum_probs=67.0
Q ss_pred ceecCCCcEEEEEEEeCCCcEEEEEEeecccCCCHHHHHHHHHHHhhcCCCceeeEEee---------------------
Q 039290 767 KLLGMGSFGSVYKGVLPDGMEIAAKVFHMEFDGSLESFHAECKVMGSIRHRNLVKIISS--------------------- 825 (1049)
Q Consensus 767 ~~lg~G~fg~Vy~a~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~--------------------- 825 (1049)
+..-.|..|.++.+. ++..|+||... .-..+.+-.++...=.+.-|+..-+.-.
T Consensus 75 ~~s~~Gstgvff~~t--d~~~~VVK~s~---~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~~~~~l 149 (342)
T 1cja_A 75 ERSEKGTEGLFFVET--ESGVFIVKRST---NIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDKSFRVI 149 (342)
T ss_dssp EECCSTTSCEEEEEE--SSCEEEEECCT---THHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCSSSCHH
T ss_pred EeccCCCCCeEEEEe--CCCEEEEeCcH---HHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhhhhHHH
Confidence 444556655444444 57789999541 1122333334444434455553222111
Q ss_pred -eecCCeeEEEEeccCCCChhhhhhcC-CCccCHHHHHHHHHHHHH--HHHHhH-ccCCCCeEE-cCCCCCCeeecCCCc
Q 039290 826 -CSNNDFKALVLEYMSNGSLEKCLYSD-NYFLDILQRLKIMIDVAS--ALEYLH-FGYSTPIVH-CDIKPSNVLLNESMV 899 (1049)
Q Consensus 826 -~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~--~l~~LH-~~~~~~ivH-~Dlkp~NIl~~~~~~ 899 (1049)
........++|||++|..|.+.-... ...+... .+.++.+ ++.... ..++-..+. ..-.+.|||+++++.
T Consensus 150 ~~l~~~~~~l~meyv~G~~L~e~~~~~~~~~f~~~----~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~ 225 (342)
T 1cja_A 150 TTLANQANILLMELVRGITLNKLTTTSAPEVLTKS----TMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGA 225 (342)
T ss_dssp HHHTTCSEEEEEECCCEEESTTCCSSSHHHHSCHH----HHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTT
T ss_pred HHhhcccceehhhhcCCCccccchhhhhhhhcCHH----HHHhhchhheehhhhcCCccCcccccCCCChhheEEeCCCC
Confidence 00122456999999976665431110 0112222 2333322 333433 332332221 125789999986554
Q ss_pred -eEEecccCcee
Q 039290 900 -GHLSDFGIAKI 910 (1049)
Q Consensus 900 -~kl~DfGla~~ 910 (1049)
+.++|-+.+..
T Consensus 226 ~~~~IDhn~af~ 237 (342)
T 1cja_A 226 TVVPIDSKIIPL 237 (342)
T ss_dssp CEEECSCCCCCC
T ss_pred eEEEEcCCcccc
Confidence 88999998864
No 460
>3ox7_P MH027; urokinase-type plasminogen activator, peptidyl inhibitor, pharmacophore, hydrolase, hydrolase-hydrolase inhibitor COM; HET: PG4; 1.58A {Homo sapiens} PDB: 3oy5_P 3oy6_P
Probab=21.48 E-value=20 Score=20.30 Aligned_cols=9 Identities=44% Similarity=1.269 Sum_probs=7.1
Q ss_pred CCceeeeEE
Q 039290 59 SVCSWIGVT 67 (1049)
Q Consensus 59 ~~c~w~gv~ 67 (1049)
..|+|+|..
T Consensus 6 gacswrgle 14 (23)
T 3ox7_P 6 GACSWRGLE 14 (26)
T ss_pred cccccccch
Confidence 469999975
Done!