BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039291
(362 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 126/266 (47%), Gaps = 23/266 (8%)
Query: 14 IGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLECFGE 73
IG+GSFG VF + + +Q+E V + P+V + +G
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCD-SPYVTKYYGS 93
Query: 74 EITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGY 133
+ + +++EY GG+ DL+E L E + R IL+G+ ++H
Sbjct: 94 YLK-----DTKLWIIMEYLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSEKK 145
Query: 134 VHCDVKPDNILLVATQSGKFVAKIADLGVAKR--SRHCKRQKFDPSMRGTPLYLAPETVV 191
+H D+K N+LL ++ G+ K+AD GVA + KR F GTP ++APE +
Sbjct: 146 IHRDIKAANVLL--SEHGE--VKLADFGVAGQLTDTQIKRNTF----VGTPFWMAPEVIK 197
Query: 192 QHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEAR 251
Q ++ +DIW+LG +E+ G E + LF I +++ P + SK +
Sbjct: 198 QSAYDSKADIWSLGITAIELARGEPPH--SELHPMKVLFLI--PKNNPPTLEGNYSKPLK 253
Query: 252 DFLRRCFVRKPAFRFTAEMLLDDPFV 277
+F+ C ++P+FR TA+ LL F+
Sbjct: 254 EFVEACLNKEPSFRPTAKELLKHKFI 279
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 126/266 (47%), Gaps = 23/266 (8%)
Query: 14 IGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLECFGE 73
IG+GSFG VF + + +Q+E V + P+V + +G
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCD-SPYVTKYYGS 73
Query: 74 EITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGY 133
+ + +++EY GG+ DL+E L E + R IL+G+ ++H
Sbjct: 74 YLK-----DTKLWIIMEYLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSEKK 125
Query: 134 VHCDVKPDNILLVATQSGKFVAKIADLGVAKR--SRHCKRQKFDPSMRGTPLYLAPETVV 191
+H D+K N+LL ++ G+ K+AD GVA + KR F GTP ++APE +
Sbjct: 126 IHRDIKAANVLL--SEHGE--VKLADFGVAGQLTDTQIKRNTF----VGTPFWMAPEVIK 177
Query: 192 QHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEAR 251
Q ++ +DIW+LG +E+ G E + LF I +++ P + SK +
Sbjct: 178 QSAYDSKADIWSLGITAIELARGEPPH--SELHPMKVLFLI--PKNNPPTLEGNYSKPLK 233
Query: 252 DFLRRCFVRKPAFRFTAEMLLDDPFV 277
+F+ C ++P+FR TA+ LL F+
Sbjct: 234 EFVEACLNKEPSFRPTAKELLKHKFI 259
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 126/266 (47%), Gaps = 23/266 (8%)
Query: 14 IGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLECFGE 73
IG+GSFG VF + + +Q+E V + P+V + +G
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCD-SPYVTKYYGS 88
Query: 74 EITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGY 133
+ + +++EY GG+ DL+E L E + R IL+G+ ++H
Sbjct: 89 YLK-----DTKLWIIMEYLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSEKK 140
Query: 134 VHCDVKPDNILLVATQSGKFVAKIADLGVAKR--SRHCKRQKFDPSMRGTPLYLAPETVV 191
+H D+K N+LL ++ G+ K+AD GVA + KR F GTP ++APE +
Sbjct: 141 IHRDIKAANVLL--SEHGE--VKLADFGVAGQLTDTQIKRNXF----VGTPFWMAPEVIK 192
Query: 192 QHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEAR 251
Q ++ +DIW+LG +E+ G E + LF I +++ P + SK +
Sbjct: 193 QSAYDSKADIWSLGITAIELARGEPPH--SELHPMKVLFLI--PKNNPPTLEGNYSKPLK 248
Query: 252 DFLRRCFVRKPAFRFTAEMLLDDPFV 277
+F+ C ++P+FR TA+ LL F+
Sbjct: 249 EFVEACLNKEPSFRPTAKELLKHKFI 274
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 126/266 (47%), Gaps = 23/266 (8%)
Query: 14 IGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLECFGE 73
IG+GSFG VF + + +Q+E V + P+V + +G
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCD-SPYVTKYYGS 73
Query: 74 EITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGY 133
+ + +++EY GG+ DL+E L E + R IL+G+ ++H
Sbjct: 74 YLK-----DTKLWIIMEYLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSEKK 125
Query: 134 VHCDVKPDNILLVATQSGKFVAKIADLGVAKR--SRHCKRQKFDPSMRGTPLYLAPETVV 191
+H D+K N+LL ++ G+ K+AD GVA + KR F GTP ++APE +
Sbjct: 126 IHRDIKAANVLL--SEHGE--VKLADFGVAGQLTDTQIKRNXF----VGTPFWMAPEVIK 177
Query: 192 QHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEAR 251
Q ++ +DIW+LG +E+ G E + LF I +++ P + SK +
Sbjct: 178 QSAYDSKADIWSLGITAIELARGEPPH--SELHPMKVLFLI--PKNNPPTLEGNYSKPLK 233
Query: 252 DFLRRCFVRKPAFRFTAEMLLDDPFV 277
+F+ C ++P+FR TA+ LL F+
Sbjct: 234 EFVEACLNKEPSFRPTAKELLKHKFI 259
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 101/192 (52%), Gaps = 13/192 (6%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
+L+E+ GG L D++ + N E+ + +L+ + ++H G +H D+K D+ILL
Sbjct: 119 VLMEFLQGGALTDIVSQVRLN---EEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILL- 174
Query: 147 ATQSGKFVAKIADLGV-AKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALG 205
T G+ K++D G A+ S+ ++K + GTP ++APE + + + DIW+LG
Sbjct: 175 -TLDGR--VKLSDFGFCAQISKDVPKRK---XLVGTPYWMAPEVISRSLYATEVDIWSLG 228
Query: 206 CVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFR 265
+V+EM+ G + D + + + + +VS RDFL R VR P R
Sbjct: 229 IMVIEMVDGEPPYF--SDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQER 286
Query: 266 FTAEMLLDDPFV 277
TA+ LLD PF+
Sbjct: 287 ATAQELLDHPFL 298
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 134/275 (48%), Gaps = 29/275 (10%)
Query: 13 VIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLECFG 72
V+G+G++G V+ + SN + + L +E + +L +++ G
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIA-IKEIPERDSRYSQPLHEEIALHKHLK-HKNIVQYLG 86
Query: 73 EEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKD----VRHFTRCILEGIGHI 128
+ ENG + + +E GG+L L+ G P KD + +T+ ILEG+ ++
Sbjct: 87 ---SFSENGFI--KIFMEQVPGGSLSALLRSKWG---PLKDNEQTIGFYTKQILEGLKYL 138
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDP---SMRGTPLYL 185
HD+ VH D+K DN+ L+ T SG V KI+D G +KR +P + GT Y+
Sbjct: 139 HDNQIVHRDIKGDNV-LINTYSG--VLKISDFGTSKR-----LAGINPCTETFTGTLQYM 190
Query: 186 APETVVQHMQ--EAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIP 243
APE + + + +DIW+LGC ++EM +G+ + E +G PEIP
Sbjct: 191 APEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFY--ELGEPQAAMFKVGMFKVHPEIP 248
Query: 244 SRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVK 278
+S EA+ F+ +CF P R A LL D F+K
Sbjct: 249 ESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLK 283
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 134/275 (48%), Gaps = 29/275 (10%)
Query: 13 VIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLECFG 72
V+G+G++G V+ + SN + + L +E + +L +++ G
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIA-IKEIPERDSRYSQPLHEEIALHKHLK-HKNIVQYLG 72
Query: 73 EEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKD----VRHFTRCILEGIGHI 128
+ ENG + + +E GG+L L+ G P KD + +T+ ILEG+ ++
Sbjct: 73 ---SFSENGFI--KIFMEQVPGGSLSALLRSKWG---PLKDNEQTIGFYTKQILEGLKYL 124
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDP---SMRGTPLYL 185
HD+ VH D+K DN+ L+ T SG V KI+D G +KR +P + GT Y+
Sbjct: 125 HDNQIVHRDIKGDNV-LINTYSG--VLKISDFGTSKR-----LAGINPCTETFTGTLQYM 176
Query: 186 APETVVQHMQ--EAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIP 243
APE + + + +DIW+LGC ++EM +G+ + E +G PEIP
Sbjct: 177 APEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFY--ELGEPQAAMFKVGMFKVHPEIP 234
Query: 244 SRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVK 278
+S EA+ F+ +CF P R A LL D F+K
Sbjct: 235 ESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLK 269
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 124/269 (46%), Gaps = 20/269 (7%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSSFLPPLM--XXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
G ++G+GSF V+ A+ + M +Q E ++ L P +L
Sbjct: 16 GNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH-PSIL 74
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
E + E+ Y L+LE G + + K E + RHF I+ G+ ++
Sbjct: 75 ELYN----YFEDSNYVY-LVLEMCHNGEMNRYL-KNRVKPFSENEARHFMHQIITGMLYL 128
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
H G +H D+ N+LL + KIAD G+A + + + + ++ GTP Y++PE
Sbjct: 129 HSHGILHRDLTLSNLLLTRNMN----IKIADFGLATQLKMPHEKHY--TLCGTPNYISPE 182
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSK 248
+ SD+W+LGC+ +L GR + D + L ++ ++ E+PS +S
Sbjct: 183 IATRSAHGLESDVWSLGCMFYTLLIGRPPF--DTDTVKNTLNKVVLADY---EMPSFLSI 237
Query: 249 EARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
EA+D + + R PA R + +LD PF+
Sbjct: 238 EAKDLIHQLLRRNPADRLSLSSVLDHPFM 266
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 104/192 (54%), Gaps = 9/192 (4%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
L++EY GG L D I + N L E D F + I EGI H+H +H D+KP+NIL V
Sbjct: 163 LVMEYVDGGELFDRIIDESYN-LTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCV 221
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGC 206
+ + KI D G+A+R + R+K + GTP +LAPE V P+D+W++G
Sbjct: 222 NRDAKQI--KIIDFGLARRYK--PREKLKVNF-GTPEFLAPEVVNYDFVSFPTDMWSVGV 276
Query: 207 VVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLP-EIPSRVSKEARDFLRRCFVRKPAFR 265
+ +LSG ++ D + L +I+ L E +S+EA++F+ + +++ ++R
Sbjct: 277 IAYMLLSGLSPFLGDNDA--ETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWR 334
Query: 266 FTAEMLLDDPFV 277
+A L P++
Sbjct: 335 ISASEALKHPWL 346
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 104/198 (52%), Gaps = 7/198 (3%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
L+LEYAAGG + L + E DV + ILEG+ ++H + VH D+KP NILL
Sbjct: 106 LILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLS 165
Query: 147 ATQSGKFVAKIADLGVAKRSRH-CKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALG 205
+ + KI D G++++ H C+ ++ + GTP YLAPE + +D+W +G
Sbjct: 166 SIYPLGDI-KIVDFGMSRKIGHACELRE----IMGTPEYLAPEILNYDPITTATDMWNIG 220
Query: 206 CVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFR 265
+ +L+ +V +++ S + ++S E S VS+ A DF++ V+ P R
Sbjct: 221 IIAYMLLTHTSPFVGEDNQETYLNISQVNVDYS-EETFSSVSQLATDFIQSLLVKNPEKR 279
Query: 266 FTAEMLLDDPFVKGVDEE 283
TAE+ L +++ D E
Sbjct: 280 PTAEICLSHSWLQQWDFE 297
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 101/204 (49%), Gaps = 10/204 (4%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
L+LE AGG L D + L E++ F + IL G+ ++H H D+KP+NI+L+
Sbjct: 91 LILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL 148
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGC 206
K KI D G+A + K ++ GTP ++APE V +D+W++G
Sbjct: 149 DRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPAFVAPEIVNYEPLGLEADMWSIGV 205
Query: 207 VVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLP-EIPSRVSKEARDFLRRCFVRKPAFR 265
+ +LSG ++ D + L ++ + E S S A+DF+RR V+ P R
Sbjct: 206 ITYILLSGASPFL--GDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
Query: 266 FTAEMLLDDPFVKGVDEE--LSRE 287
T + L P++K D + LSR+
Sbjct: 264 MTIQDSLQHPWIKPKDTQQALSRK 287
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 128/260 (49%), Gaps = 25/260 (9%)
Query: 12 RVIGQGSFGCVF----IAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
+V+GQGSFG VF + +P S + ++ + E+++ ++N PFV
Sbjct: 34 KVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVN-HPFV 92
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGL-PEKDVRHFTRCILEGIG 126
++ T G+ L+L++ GG DL + + + E+DV+ + + G+
Sbjct: 93 VKLHYAFQTEGK-----LYLILDFLRGG---DLFTRLSKEVMFTEEDVKFYLAELALGLD 144
Query: 127 HIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLA 186
H+H G ++ D+KP+NILL + G K+ D G++K + +++ + S GT Y+A
Sbjct: 145 HLHSLGIIYRDLKPENILL--DEEGHI--KLTDFGLSKEAIDHEKKAY--SFCGTVEYMA 198
Query: 187 PETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRV 246
PE V + +D W+ G ++ EML+G + K+ L I+ + +P+ +
Sbjct: 199 PEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTL--ILKAKLGMPQF---L 253
Query: 247 SKEARDFLRRCFVRKPAFRF 266
S EA+ LR F R PA R
Sbjct: 254 STEAQSLLRALFKRNPANRL 273
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 118/261 (45%), Gaps = 15/261 (5%)
Query: 8 WFRGRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
W + +G+G++G V +A + + + ++KE + LN V
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNH-ENV 66
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ +G G + Y L LEY +GG L D IE G+PE D + F ++ G+ +
Sbjct: 67 VKFYGHR----REGNIQY-LFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVY 119
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H G H D+KP+N+LL + KI+D G+A R+ R++ M GT Y+AP
Sbjct: 120 LHGIGITHRDIKPENLLLDERDN----LKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 188 ETVVQH-MQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRV 246
E + + P D+W+ G V+ ML+G W D Q +S ++ + ++
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC--QEYSDWKEKKTYLNPWKKI 233
Query: 247 SKEARDFLRRCFVRKPAFRFT 267
L + V P+ R T
Sbjct: 234 DSAPLALLHKILVENPSARIT 254
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 101/204 (49%), Gaps = 10/204 (4%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
L+LE AGG L D + L E++ F + IL G+ ++H H D+KP+NI+L+
Sbjct: 91 LILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL 148
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGC 206
K KI D G+A + K ++ GTP ++APE V +D+W++G
Sbjct: 149 DRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 207 VVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLP-EIPSRVSKEARDFLRRCFVRKPAFR 265
+ +LSG ++ D + L ++ + E S S A+DF+RR V+ P R
Sbjct: 206 ITYILLSGASPFL--GDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
Query: 266 FTAEMLLDDPFVKGVDEE--LSRE 287
T + L P++K D + LSR+
Sbjct: 264 MTIQDSLQHPWIKPKDTQQALSRK 287
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 101/204 (49%), Gaps = 10/204 (4%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
L+LE AGG L D + L E++ F + IL G+ ++H H D+KP+NI+L+
Sbjct: 91 LILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL 148
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGC 206
K KI D G+A + K ++ GTP ++APE V +D+W++G
Sbjct: 149 DRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 207 VVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLP-EIPSRVSKEARDFLRRCFVRKPAFR 265
+ +LSG ++ D + L ++ + E S S A+DF+RR V+ P R
Sbjct: 206 ITYILLSGASPFL--GDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
Query: 266 FTAEMLLDDPFVKGVDEE--LSRE 287
T + L P++K D + LSR+
Sbjct: 264 MTIQDSLQHPWIKPKDTQQALSRK 287
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 118/262 (45%), Gaps = 15/262 (5%)
Query: 7 SWFRGRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPF 66
W + +G+G++G V +A + + + ++KE + LN
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNH-EN 66
Query: 67 VLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIG 126
V++ +G G + Y L LEY +GG L D IE G+PE D + F ++ G+
Sbjct: 67 VVKFYGHR----REGNIQY-LFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVV 119
Query: 127 HIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLA 186
++H G H D+KP+N+LL + KI+D G+A R+ R++ M GT Y+A
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDN----LKISDFGLATVFRYNNRERLLNKMXGTLPYVA 175
Query: 187 PETVVQH-MQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSR 245
PE + + P D+W+ G V+ ML+G W D Q +S ++ + +
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC--QEYSDWKEKKTYLNPWKK 233
Query: 246 VSKEARDFLRRCFVRKPAFRFT 267
+ L + V P+ R T
Sbjct: 234 IDSAPLALLHKILVENPSARIT 255
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 101/204 (49%), Gaps = 10/204 (4%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
L+LE AGG L D + L E++ F + IL G+ ++H H D+KP+NI+L+
Sbjct: 91 LILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL 148
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGC 206
K KI D G+A + K ++ GTP ++APE V +D+W++G
Sbjct: 149 DRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 207 VVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLP-EIPSRVSKEARDFLRRCFVRKPAFR 265
+ +LSG ++ D + L ++ + E S S A+DF+RR V+ P R
Sbjct: 206 ITYILLSGASPFL--GDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
Query: 266 FTAEMLLDDPFVKGVDEE--LSRE 287
T + L P++K D + LSR+
Sbjct: 264 MTIQDSLQHPWIKPKDTQQALSRK 287
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 97/198 (48%), Gaps = 8/198 (4%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
L+LE AGG L D + L E++ F + IL G+ ++H H D+KP+NI+L+
Sbjct: 90 LILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL 147
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGC 206
K KI D G+A + K ++ GTP ++APE V +D+W++G
Sbjct: 148 DRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGV 204
Query: 207 VVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLP-EIPSRVSKEARDFLRRCFVRKPAFR 265
+ +LSG ++ D + L ++ + E S S A+DF+RR V+ P R
Sbjct: 205 ITYILLSGASPFL--GDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 262
Query: 266 FTAEMLLDDPFVKGVDEE 283
T + L P++K D +
Sbjct: 263 MTIQDSLQHPWIKPKDTQ 280
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 97/198 (48%), Gaps = 8/198 (4%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
L+LE AGG L D + L E++ F + IL G+ ++H H D+KP+NI+L+
Sbjct: 90 LILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL 147
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGC 206
K KI D G+A + K ++ GTP ++APE V +D+W++G
Sbjct: 148 DRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGV 204
Query: 207 VVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLP-EIPSRVSKEARDFLRRCFVRKPAFR 265
+ +LSG ++ D + L ++ + E S S A+DF+RR V+ P R
Sbjct: 205 ITYILLSGASPFL--GDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 262
Query: 266 FTAEMLLDDPFVKGVDEE 283
T + L P++K D +
Sbjct: 263 MTIQDSLQHPWIKPKDTQ 280
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 97/198 (48%), Gaps = 8/198 (4%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
L+LE AGG L D + L E++ F + IL G+ ++H H D+KP+NI+L+
Sbjct: 91 LILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL 148
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGC 206
K KI D G+A + K ++ GTP ++APE V +D+W++G
Sbjct: 149 DRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 207 VVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLP-EIPSRVSKEARDFLRRCFVRKPAFR 265
+ +LSG ++ D + L ++ + E S S A+DF+RR V+ P R
Sbjct: 206 ITYILLSGASPFL--GDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
Query: 266 FTAEMLLDDPFVKGVDEE 283
T + L P++K D +
Sbjct: 264 MTIQDSLQHPWIKPKDTQ 281
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 101/204 (49%), Gaps = 10/204 (4%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
L+LE AGG L D + L E++ F + IL G+ ++H H D+KP+NI+L+
Sbjct: 91 LILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL 148
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGC 206
K KI D G+A + K ++ GTP ++APE V +D+W++G
Sbjct: 149 DRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 207 VVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLP-EIPSRVSKEARDFLRRCFVRKPAFR 265
+ +LSG ++ D + L ++ + E S S A+DF+RR V+ P R
Sbjct: 206 ITYILLSGASPFL--GDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
Query: 266 FTAEMLLDDPFVKGVDEE--LSRE 287
T + L P++K D + LSR+
Sbjct: 264 MTIQDSLQHPWIKPKDTQQALSRK 287
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 97/198 (48%), Gaps = 8/198 (4%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
L+LE AGG L D + L E++ F + IL G+ ++H H D+KP+NI+L+
Sbjct: 91 LILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL 148
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGC 206
K KI D G+A + K ++ GTP ++APE V +D+W++G
Sbjct: 149 DRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 207 VVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLP-EIPSRVSKEARDFLRRCFVRKPAFR 265
+ +LSG ++ D + L ++ + E S S A+DF+RR V+ P R
Sbjct: 206 ITYILLSGASPFL--GDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
Query: 266 FTAEMLLDDPFVKGVDEE 283
T + L P++K D +
Sbjct: 264 MTIQDSLQHPWIKPKDTQ 281
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 97/198 (48%), Gaps = 8/198 (4%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
L+LE AGG L D + L E++ F + IL G+ ++H H D+KP+NI+L+
Sbjct: 91 LILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL 148
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGC 206
K KI D G+A + K ++ GTP ++APE V +D+W++G
Sbjct: 149 DRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 207 VVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLP-EIPSRVSKEARDFLRRCFVRKPAFR 265
+ +LSG ++ D + L ++ + E S S A+DF+RR V+ P R
Sbjct: 206 ITYILLSGASPFL--GDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
Query: 266 FTAEMLLDDPFVKGVDEE 283
T + L P++K D +
Sbjct: 264 MTIQDSLQHPWIKPKDTQ 281
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 97/198 (48%), Gaps = 8/198 (4%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
L+LE AGG L D + L E++ F + IL G+ ++H H D+KP+NI+L+
Sbjct: 91 LILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL 148
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGC 206
K KI D G+A + K ++ GTP ++APE V +D+W++G
Sbjct: 149 DRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 207 VVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLP-EIPSRVSKEARDFLRRCFVRKPAFR 265
+ +LSG ++ D + L ++ + E S S A+DF+RR V+ P R
Sbjct: 206 ITYILLSGASPFL--GDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
Query: 266 FTAEMLLDDPFVKGVDEE 283
T + L P++K D +
Sbjct: 264 MTIQDSLQHPWIKPKDTQ 281
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 118/261 (45%), Gaps = 15/261 (5%)
Query: 8 WFRGRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
W + +G+G++G V +A + + + ++KE + LN V
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH-ENV 66
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ +G G + Y L LEY +GG L D IE G+PE D + F ++ G+ +
Sbjct: 67 VKFYGHR----REGNIQY-LFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVY 119
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H G H D+KP+N+LL + KI+D G+A R+ R++ M GT Y+AP
Sbjct: 120 LHGIGITHRDIKPENLLLDERDN----LKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 188 ETVVQH-MQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRV 246
E + + P D+W+ G V+ ML+G W D Q +S ++ + ++
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSX--QEYSDWKEKKTYLNPWKKI 233
Query: 247 SKEARDFLRRCFVRKPAFRFT 267
L + V P+ R T
Sbjct: 234 DSAPLALLHKILVENPSARIT 254
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 95/193 (49%), Gaps = 8/193 (4%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
L+LE AGG L D + L E++ F + IL G+ ++H H D+KP+NI+L+
Sbjct: 91 LILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL 148
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGC 206
K KI D G+A + K ++ GTP ++APE V +D+W++G
Sbjct: 149 DRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 207 VVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLP-EIPSRVSKEARDFLRRCFVRKPAFR 265
+ +LSG ++ D + L ++ + E S S A+DF+RR V+ P R
Sbjct: 206 ITYILLSGASPFL--GDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
Query: 266 FTAEMLLDDPFVK 278
T + L P++K
Sbjct: 264 MTIQDSLQHPWIK 276
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 121/266 (45%), Gaps = 23/266 (8%)
Query: 14 IGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLECFGE 73
IG+GSFG V+ + + +Q+E V + P++ FG
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCD-SPYITRYFGS 85
Query: 74 EITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGY 133
+ +++EY GG+ DL++ L E + R IL+G+ ++H
Sbjct: 86 YLK-----STKLWIIMEYLGGGSALDLLKP---GPLEETYIATILREILKGLDYLHSERK 137
Query: 134 VHCDVKPDNILLVATQSGKFVAKIADLGVAKR--SRHCKRQKFDPSMRGTPLYLAPETVV 191
+H D+K N+LL ++ G K+AD GVA + KR F GTP ++APE +
Sbjct: 138 IHRDIKAANVLL--SEQGD--VKLADFGVAGQLTDTQIKRNXF----VGTPFWMAPEVIK 189
Query: 192 QHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEAR 251
Q + +DIW+LG +E+ G D ++ +I ++S P + + SK +
Sbjct: 190 QSAYDFKADIWSLGITAIELAKGEPP---NSDLHPMRVLFLI-PKNSPPTLEGQHSKPFK 245
Query: 252 DFLRRCFVRKPAFRFTAEMLLDDPFV 277
+F+ C + P FR TA+ LL F+
Sbjct: 246 EFVEACLNKDPRFRPTAKELLKHKFI 271
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 95/193 (49%), Gaps = 8/193 (4%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
L+LE AGG L D + L E++ F + IL G+ ++H H D+KP+NI+L+
Sbjct: 91 LILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL 148
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGC 206
K KI D G+A + K ++ GTP ++APE V +D+W++G
Sbjct: 149 DRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 207 VVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLP-EIPSRVSKEARDFLRRCFVRKPAFR 265
+ +LSG ++ D + L ++ + E S S A+DF+RR V+ P R
Sbjct: 206 ITYILLSGASPFL--GDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
Query: 266 FTAEMLLDDPFVK 278
T + L P++K
Sbjct: 264 MTIQDSLQHPWIK 276
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 118/261 (45%), Gaps = 15/261 (5%)
Query: 8 WFRGRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
W + +G+G++G V +A + + + ++KE + LN V
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNH-ENV 66
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ +G G + Y L LEY +GG L D IE G+PE D + F ++ G+ +
Sbjct: 67 VKFYGHR----REGNIQY-LFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVY 119
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H G H D+KP+N+LL + KI+D G+A R+ R++ M GT Y+AP
Sbjct: 120 LHGIGITHRDIKPENLLLDERDN----LKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 188 ETVVQH-MQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRV 246
E + + P D+W+ G V+ ML+G W D Q +S ++ + ++
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC--QEYSDWKEKKTYLNPWKKI 233
Query: 247 SKEARDFLRRCFVRKPAFRFT 267
L + V P+ R T
Sbjct: 234 DSAPLALLHKILVENPSARIT 254
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 118/262 (45%), Gaps = 15/262 (5%)
Query: 7 SWFRGRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPF 66
W + +G+G++G V +A + + + ++KE + LN
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH-EN 65
Query: 67 VLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIG 126
V++ +G G + Y L LEY +GG L D IE G+PE D + F ++ G+
Sbjct: 66 VVKFYGHR----REGNIQY-LFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVV 118
Query: 127 HIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLA 186
++H G H D+KP+N+LL + KI+D G+A R+ R++ M GT Y+A
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDN----LKISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 187 PETVVQH-MQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSR 245
PE + + P D+W+ G V+ ML+G W D Q +S ++ + +
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC--QEYSDWKEKKTYLNPWKK 232
Query: 246 VSKEARDFLRRCFVRKPAFRFT 267
+ L + V P+ R T
Sbjct: 233 IDSAPLALLHKILVENPSARIT 254
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 125/269 (46%), Gaps = 26/269 (9%)
Query: 14 IGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGC--PFVLECF 71
+G+GS+G V+ A K + LQ+ + + C P V++ +
Sbjct: 37 LGEGSYGSVYKAIHKETGQIV------AIKQVPVESDLQEIIKEISIMQQCDSPHVVKYY 90
Query: 72 GEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDS 131
G + +N ++ +++EY G++ D+I + L E ++ + L+G+ ++H
Sbjct: 91 G---SYFKNTDLW--IVMEYCGAGSVSDII-RLRNKTLTEDEIATILQSTLKGLEYLHFM 144
Query: 132 GYVHCDVKPDNILLVATQSGKFVAKIADLGVAKR--SRHCKRQKFDPSMRGTPLYLAPET 189
+H D+K NILL + + AK+AD GVA + KR + GTP ++APE
Sbjct: 145 RKIHRDIKAGNILL----NTEGHAKLADFGVAGQLTDXMAKRN----XVIGTPFWMAPEV 196
Query: 190 VVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKE 249
+ + +DIW+LG +EM G+ + + + +F I + P S
Sbjct: 197 IQEIGYNCVADIWSLGITAIEMAEGKPPYA--DIHPMRAIFMIPTNPPPTFRKPELWSDN 254
Query: 250 ARDFLRRCFVRKPAFRFTAEMLLDDPFVK 278
DF+++C V+ P R TA LL PFV+
Sbjct: 255 FTDFVKQCLVKSPEQRATATQLLQHPFVR 283
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 118/261 (45%), Gaps = 15/261 (5%)
Query: 8 WFRGRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
W + +G+G++G V +A + + + ++KE + LN V
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH-ENV 66
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ +G G + Y L LEY +GG L D IE G+PE D + F ++ G+ +
Sbjct: 67 VKFYGHR----REGNIQY-LFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVY 119
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H G H D+KP+N+LL + KI+D G+A R+ R++ M GT Y+AP
Sbjct: 120 LHGIGITHRDIKPENLLLDERDN----LKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 188 ETVVQH-MQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRV 246
E + + P D+W+ G V+ ML+G W D Q +S ++ + ++
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC--QEYSDWKEKKTYLNPWKKI 233
Query: 247 SKEARDFLRRCFVRKPAFRFT 267
L + V P+ R T
Sbjct: 234 DSAPLALLHKILVENPSARIT 254
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 103/212 (48%), Gaps = 10/212 (4%)
Query: 75 ITMGENGEMAYNLLL--EYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSG 132
IT+ E E +++L E AGG L D + L E++ F + IL G+ ++H
Sbjct: 77 ITLHEVYENKTDVILIGELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 133 YVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQ 192
H D+KP+NI+L+ K KI D G+A + K ++ GTP ++APE V
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNY 191
Query: 193 HMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLP-EIPSRVSKEAR 251
+D+W++G + +LSG ++ D + L ++ + E S S A+
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFL--GDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 252 DFLRRCFVRKPAFRFTAEMLLDDPFVKGVDEE 283
DF+RR V+ P R T + L P++K D +
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQ 281
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 118/261 (45%), Gaps = 15/261 (5%)
Query: 8 WFRGRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
W + +G+G++G V +A + + + ++KE + LN V
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH-ENV 66
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ +G G + Y L LEY +GG L D IE G+PE D + F ++ G+ +
Sbjct: 67 VKFYGHR----REGNIQY-LFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVY 119
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H G H D+KP+N+LL + KI+D G+A R+ R++ M GT Y+AP
Sbjct: 120 LHGIGITHRDIKPENLLLDERDN----LKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 188 ETVVQH-MQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRV 246
E + + P D+W+ G V+ ML+G W D Q +S ++ + ++
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC--QEYSDWKEKKTYLNPWKKI 233
Query: 247 SKEARDFLRRCFVRKPAFRFT 267
L + V P+ R T
Sbjct: 234 DSAPLALLHKILVENPSARIT 254
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 118/261 (45%), Gaps = 15/261 (5%)
Query: 8 WFRGRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
W + +G+G++G V +A + + + ++KE + LN V
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH-ENV 67
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ +G G + Y L LEY +GG L D IE G+PE D + F ++ G+ +
Sbjct: 68 VKFYGHR----REGNIQY-LFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVY 120
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H G H D+KP+N+LL + KI+D G+A R+ R++ M GT Y+AP
Sbjct: 121 LHGIGITHRDIKPENLLLDERDN----LKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 188 ETVVQH-MQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRV 246
E + + P D+W+ G V+ ML+G W D Q +S ++ + ++
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC--QEYSDWKEKKTYLNPWKKI 234
Query: 247 SKEARDFLRRCFVRKPAFRFT 267
L + V P+ R T
Sbjct: 235 DSAPLALLHKILVENPSARIT 255
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 118/262 (45%), Gaps = 15/262 (5%)
Query: 7 SWFRGRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPF 66
W + +G+G++G V +A + + + ++KE + LN
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH-EN 66
Query: 67 VLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIG 126
V++ +G G + Y L LEY +GG L D IE G+PE D + F ++ G+
Sbjct: 67 VVKFYGHR----REGNIQY-LFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVV 119
Query: 127 HIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLA 186
++H G H D+KP+N+LL + KI+D G+A R+ R++ M GT Y+A
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDN----LKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 187 PETVVQH-MQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSR 245
PE + + P D+W+ G V+ ML+G W D Q +S ++ + +
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC--QEYSDWKEKKTYLNPWKK 233
Query: 246 VSKEARDFLRRCFVRKPAFRFT 267
+ L + V P+ R T
Sbjct: 234 IDSAPLALLHKILVENPSARIT 255
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 118/261 (45%), Gaps = 15/261 (5%)
Query: 8 WFRGRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
W + +G+G++G V +A + + + ++KE + LN V
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH-ENV 67
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ +G G + Y L LEY +GG L D IE G+PE D + F ++ G+ +
Sbjct: 68 VKFYGHR----REGNIQY-LFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVY 120
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H G H D+KP+N+LL + KI+D G+A R+ R++ M GT Y+AP
Sbjct: 121 LHGIGITHRDIKPENLLLDERDN----LKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 188 ETVVQH-MQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRV 246
E + + P D+W+ G V+ ML+G W D Q +S ++ + ++
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC--QEYSDWKEKKTYLNPWKKI 234
Query: 247 SKEARDFLRRCFVRKPAFRFT 267
L + V P+ R T
Sbjct: 235 DSAPLALLHKILVENPSARIT 255
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 118/261 (45%), Gaps = 15/261 (5%)
Query: 8 WFRGRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
W + +G+G++G V +A + + + ++KE + LN V
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH-ENV 67
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ +G G + Y L LEY +GG L D IE G+PE D + F ++ G+ +
Sbjct: 68 VKFYGHR----REGNIQY-LFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVY 120
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H G H D+KP+N+LL + KI+D G+A R+ R++ M GT Y+AP
Sbjct: 121 LHGIGITHRDIKPENLLLDERDN----LKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 188 ETVVQH-MQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRV 246
E + + P D+W+ G V+ ML+G W D Q +S ++ + ++
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC--QEYSDWKEKKTYLNPWKKI 234
Query: 247 SKEARDFLRRCFVRKPAFRFT 267
L + V P+ R T
Sbjct: 235 DSAPLALLHKILVENPSARIT 255
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 118/261 (45%), Gaps = 15/261 (5%)
Query: 8 WFRGRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
W + +G+G++G V +A + + + ++KE + LN V
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH-ENV 67
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ +G G + Y L LEY +GG L D IE G+PE D + F ++ G+ +
Sbjct: 68 VKFYGHR----REGNIQY-LFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVY 120
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H G H D+KP+N+LL + KI+D G+A R+ R++ M GT Y+AP
Sbjct: 121 LHGIGITHRDIKPENLLLDERDN----LKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 188 ETVVQH-MQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRV 246
E + + P D+W+ G V+ ML+G W D Q +S ++ + ++
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC--QEYSDWKEKKTYLNPWKKI 234
Query: 247 SKEARDFLRRCFVRKPAFRFT 267
L + V P+ R T
Sbjct: 235 DSAPLALLHKILVENPSARIT 255
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 118/262 (45%), Gaps = 15/262 (5%)
Query: 7 SWFRGRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPF 66
W + +G+G++G V +A + + + ++KE + LN
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH-EN 65
Query: 67 VLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIG 126
V++ +G G + Y L LEY +GG L D IE G+PE D + F ++ G+
Sbjct: 66 VVKFYGHR----REGNIQY-LFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVV 118
Query: 127 HIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLA 186
++H G H D+KP+N+LL + KI+D G+A R+ R++ M GT Y+A
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDN----LKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 187 PETVVQH-MQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSR 245
PE + + P D+W+ G V+ ML+G W D Q +S ++ + +
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC--QEYSDWKEKKTYLNPWKK 232
Query: 246 VSKEARDFLRRCFVRKPAFRFT 267
+ L + V P+ R T
Sbjct: 233 IDSAPLALLHKILVENPSARIT 254
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 118/261 (45%), Gaps = 15/261 (5%)
Query: 8 WFRGRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
W + +G+G++G V +A + + + ++KE + LN V
Sbjct: 7 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH-ENV 65
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ +G G + Y L LEY +GG L D IE G+PE D + F ++ G+ +
Sbjct: 66 VKFYGHR----REGNIQY-LFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVY 118
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H G H D+KP+N+LL + KI+D G+A R+ R++ M GT Y+AP
Sbjct: 119 LHGIGITHRDIKPENLLLDERDN----LKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 174
Query: 188 ETVVQH-MQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRV 246
E + + P D+W+ G V+ ML+G W D Q +S ++ + ++
Sbjct: 175 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC--QEYSDWKEKKTYLNPWKKI 232
Query: 247 SKEARDFLRRCFVRKPAFRFT 267
L + V P+ R T
Sbjct: 233 DSAPLALLHKILVENPSARIT 253
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 118/262 (45%), Gaps = 15/262 (5%)
Query: 7 SWFRGRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPF 66
W + +G+G++G V +A + + + ++KE + LN
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH-EN 65
Query: 67 VLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIG 126
V++ +G G + Y L LEY +GG L D IE G+PE D + F ++ G+
Sbjct: 66 VVKFYGHR----REGNIQY-LFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVV 118
Query: 127 HIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLA 186
++H G H D+KP+N+LL + KI+D G+A R+ R++ M GT Y+A
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDN----LKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 187 PETVVQH-MQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSR 245
PE + + P D+W+ G V+ ML+G W D Q +S ++ + +
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC--QEYSDWKEKKTYLNPWKK 232
Query: 246 VSKEARDFLRRCFVRKPAFRFT 267
+ L + V P+ R T
Sbjct: 233 IDSAPLALLHKILVENPSARIT 254
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 117/251 (46%), Gaps = 19/251 (7%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSS--FLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
G+++G+GSF V +A+ + S + L + +E++V L+ PF +
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFV 95
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
+ + T ++ ++ + L YA G L I K E R +T I+ + ++
Sbjct: 96 KLY---FTFQDDEKLYFGL--SYAKNGCLLKYIRKIGS--FDETCTRFYTAEIVSALEYL 148
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
H G +H D+KP+NILL + +I D G AK +Q S GT Y++PE
Sbjct: 149 HGKGIIHRDLKPENILL----NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 204
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSK 248
+ + SD+WALGC++ ++++G + + I Q II E+ PE +
Sbjct: 205 LLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ--KIIKLEYDFPE---KFFP 259
Query: 249 EARDFLRRCFV 259
+ARD + + V
Sbjct: 260 KARDLVEKLLV 270
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 118/261 (45%), Gaps = 15/261 (5%)
Query: 8 WFRGRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
W + +G+G++G V +A + + + ++KE + LN V
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH-ENV 66
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ +G G + Y L LEY +GG L D IE G+PE D + F ++ G+ +
Sbjct: 67 VKFYGHR----REGNIQY-LFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVY 119
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H G H D+KP+N+LL + KI+D G+A R+ R++ M GT Y+AP
Sbjct: 120 LHGIGITHRDIKPENLLLDERDN----LKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 188 ETVVQH-MQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRV 246
E + + P D+W+ G V+ ML+G W D Q +S ++ + ++
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC--QEYSDWKEKKTYLNPWKKI 233
Query: 247 SKEARDFLRRCFVRKPAFRFT 267
L + V P+ R T
Sbjct: 234 DSAPLALLHKILVENPSARIT 254
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 128/262 (48%), Gaps = 25/262 (9%)
Query: 12 RVIGQGSFGCVFIAKPKSNSS----FLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
+V+GQGSFG VF+ K S S + ++ + E+++ +N PF+
Sbjct: 31 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN-HPFI 89
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGL-PEKDVRHFTRCILEGIG 126
++ T G+ L+L++ GG DL + + + E+DV+ + + +
Sbjct: 90 VKLHYAFQTEGK-----LYLILDFLRGG---DLFTRLSKEVMFTEEDVKFYLAELALALD 141
Query: 127 HIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLA 186
H+H G ++ D+KP+NILL + G K+ D G++K S +++ + S GT Y+A
Sbjct: 142 HLHSLGIIYRDLKPENILL--DEEGHI--KLTDFGLSKESIDHEKKAY--SFCGTVEYMA 195
Query: 187 PETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRV 246
PE V + +D W+ G ++ EML+G + K+ + + I+ + +P+ +
Sbjct: 196 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRK--ETMTMILKAKLGMPQF---L 250
Query: 247 SKEARDFLRRCFVRKPAFRFTA 268
S EA+ LR F R PA R A
Sbjct: 251 SPEAQSLLRMLFKRNPANRLGA 272
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 118/262 (45%), Gaps = 15/262 (5%)
Query: 7 SWFRGRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPF 66
W + +G+G++G V +A + + + ++KE + LN
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH-EN 65
Query: 67 VLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIG 126
V++ +G G + Y L LEY +GG L D IE G+PE D + F ++ G+
Sbjct: 66 VVKFYGHR----REGNIQY-LFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVV 118
Query: 127 HIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLA 186
++H G H D+KP+N+LL + KI+D G+A R+ R++ M GT Y+A
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDN----LKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 187 PETVVQH-MQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSR 245
PE + + P D+W+ G V+ ML+G W D Q +S ++ + +
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC--QEYSDWKEKKTYLNPWKK 232
Query: 246 VSKEARDFLRRCFVRKPAFRFT 267
+ L + V P+ R T
Sbjct: 233 IDSAPLALLHKILVENPSARIT 254
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 118/262 (45%), Gaps = 15/262 (5%)
Query: 7 SWFRGRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPF 66
W + +G+G++G V +A + + + ++KE + LN
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH-EN 65
Query: 67 VLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIG 126
V++ +G G + Y L LEY +GG L D IE G+PE D + F ++ G+
Sbjct: 66 VVKFYGHR----REGNIQY-LFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVV 118
Query: 127 HIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLA 186
++H G H D+KP+N+LL + KI+D G+A R+ R++ M GT Y+A
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDN----LKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 187 PETVVQH-MQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSR 245
PE + + P D+W+ G V+ ML+G W D Q +S ++ + +
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC--QEYSDWKEKKTYLNPWKK 232
Query: 246 VSKEARDFLRRCFVRKPAFRFT 267
+ L + V P+ R T
Sbjct: 233 IDSAPLALLHKILVENPSARIT 254
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 128/262 (48%), Gaps = 25/262 (9%)
Query: 12 RVIGQGSFGCVFIAKPKSNSS----FLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
+V+GQGSFG VF+ K S S + ++ + E+++ +N PF+
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN-HPFI 88
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGL-PEKDVRHFTRCILEGIG 126
++ T G+ L+L++ GG DL + + + E+DV+ + + +
Sbjct: 89 VKLHYAFQTEGK-----LYLILDFLRGG---DLFTRLSKEVMFTEEDVKFYLAELALALD 140
Query: 127 HIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLA 186
H+H G ++ D+KP+NILL + G K+ D G++K S +++ + S GT Y+A
Sbjct: 141 HLHSLGIIYRDLKPENILL--DEEGHI--KLTDFGLSKESIDHEKKAY--SFCGTVEYMA 194
Query: 187 PETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRV 246
PE V + +D W+ G ++ EML+G + K+ + + I+ + +P+ +
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRK--ETMTMILKAKLGMPQF---L 249
Query: 247 SKEARDFLRRCFVRKPAFRFTA 268
S EA+ LR F R PA R A
Sbjct: 250 SPEAQSLLRMLFKRNPANRLGA 271
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 128/262 (48%), Gaps = 25/262 (9%)
Query: 12 RVIGQGSFGCVFIAKPKSNSS----FLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
+V+GQGSFG VF+ K S S + ++ + E+++ +N PF+
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN-HPFI 88
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGL-PEKDVRHFTRCILEGIG 126
++ T G+ L+L++ GG DL + + + E+DV+ + + +
Sbjct: 89 VKLHYAFQTEGK-----LYLILDFLRGG---DLFTRLSKEVMFTEEDVKFYLAELALALD 140
Query: 127 HIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLA 186
H+H G ++ D+KP+NILL + G K+ D G++K S +++ + S GT Y+A
Sbjct: 141 HLHSLGIIYRDLKPENILL--DEEGHI--KLTDFGLSKESIDHEKKAY--SFCGTVEYMA 194
Query: 187 PETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRV 246
PE V + +D W+ G ++ EML+G + K+ + + I+ + +P+ +
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRK--ETMTMILKAKLGMPQF---L 249
Query: 247 SKEARDFLRRCFVRKPAFRFTA 268
S EA+ LR F R PA R A
Sbjct: 250 SPEAQSLLRMLFKRNPANRLGA 271
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 118/262 (45%), Gaps = 15/262 (5%)
Query: 7 SWFRGRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPF 66
W + +G+G++G V +A + + + ++KE + LN
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH-EN 66
Query: 67 VLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIG 126
V++ +G G + Y L LEY +GG L D IE G+PE D + F ++ G+
Sbjct: 67 VVKFYGHR----REGNIQY-LFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVV 119
Query: 127 HIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLA 186
++H G H D+KP+N+LL + KI+D G+A R+ R++ M GT Y+A
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDN----LKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 187 PETVVQH-MQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSR 245
PE + + P D+W+ G V+ ML+G W D Q +S ++ + +
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC--QEYSDWKEKKTYLNPWKK 233
Query: 246 VSKEARDFLRRCFVRKPAFRFT 267
+ L + V P+ R T
Sbjct: 234 IDSAPLALLHKILVENPSARIT 255
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 118/262 (45%), Gaps = 15/262 (5%)
Query: 7 SWFRGRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPF 66
W + +G+G++G V +A + + + ++KE + LN
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNH-EN 66
Query: 67 VLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIG 126
V++ +G G + Y L LEY +GG L D IE G+PE D + F ++ G+
Sbjct: 67 VVKFYGHR----REGNIQY-LFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVV 119
Query: 127 HIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLA 186
++H G H D+KP+N+LL + KI+D G+A R+ R++ M GT Y+A
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDN----LKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 187 PETVVQH-MQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSR 245
PE + + P D+W+ G V+ ML+G W D Q +S ++ + +
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC--QEYSDWKEKKTYLNPWKK 233
Query: 246 VSKEARDFLRRCFVRKPAFRFT 267
+ L + V P+ R T
Sbjct: 234 IDSAPLALLHKILVENPSARIT 255
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 91/188 (48%), Gaps = 10/188 (5%)
Query: 81 GEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKP 140
G + Y L LEY +GG L D IE G+PE D + F ++ G+ ++H G H D+KP
Sbjct: 76 GNIQY-LFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 132
Query: 141 DNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQH-MQEAPS 199
+N+LL + KI+D G+A R+ R++ M GT Y+APE + + P
Sbjct: 133 ENLLLDERDN----LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 188
Query: 200 DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFV 259
D+W+ G V+ ML+G W D Q +S ++ + ++ L + V
Sbjct: 189 DVWSCGIVLTAMLAGELPWDQPSDSC--QEYSDWKEKKTYLNPWKKIDSAPLALLHKILV 246
Query: 260 RKPAFRFT 267
P+ R T
Sbjct: 247 ENPSARIT 254
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 117/251 (46%), Gaps = 19/251 (7%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSS--FLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
G+++G+GSF V +A+ + S + L + +E++V L+ PF +
Sbjct: 34 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFV 92
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
+ + T ++ ++ + L YA G L I K E R +T I+ + ++
Sbjct: 93 KLY---FTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYL 145
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
H G +H D+KP+NILL + +I D G AK +Q S GT Y++PE
Sbjct: 146 HGKGIIHRDLKPENILL----NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 201
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSK 248
+ + SD+WALGC++ ++++G + + I Q II E+ PE +
Sbjct: 202 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ--KIIKLEYDFPE---KFFP 256
Query: 249 EARDFLRRCFV 259
+ARD + + V
Sbjct: 257 KARDLVEKLLV 267
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 122/266 (45%), Gaps = 23/266 (8%)
Query: 14 IGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLECFGE 73
IG+GSFG VF + + +Q+E V + +V + +G
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSS-YVTKYYGS 89
Query: 74 EITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGY 133
+ G + +++EY GG+ DL+ E + + IL+G+ ++H
Sbjct: 90 YL----KGSKLW-IIMEYLGGGSALDLLR---AGPFDEFQIATMLKEILKGLDYLHSEKK 141
Query: 134 VHCDVKPDNILLVATQSGKFVAKIADLGVAKR--SRHCKRQKFDPSMRGTPLYLAPETVV 191
+H D+K N+LL ++ G K+AD GVA + KR F GTP ++APE +
Sbjct: 142 IHRDIKAANVLL--SEQGD--VKLADFGVAGQLTDTQIKRNTF----VGTPFWMAPEVIQ 193
Query: 192 QHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEAR 251
Q ++ +DIW+LG +E+ G D ++ +I +++ P + +K +
Sbjct: 194 QSAYDSKADIWSLGITAIELAKGEPP---NSDMHPMRVLFLI-PKNNPPTLVGDFTKSFK 249
Query: 252 DFLRRCFVRKPAFRFTAEMLLDDPFV 277
+F+ C + P+FR TA+ LL F+
Sbjct: 250 EFIDACLNKDPSFRPTAKELLKHKFI 275
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 117/251 (46%), Gaps = 19/251 (7%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSS--FLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
G+++G+GSF V +A+ + S + L + +E++V L+ PF +
Sbjct: 38 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFV 96
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
+ + T ++ ++ + L YA G L I K E R +T I+ + ++
Sbjct: 97 KLY---FTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYL 149
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
H G +H D+KP+NILL + +I D G AK +Q S GT Y++PE
Sbjct: 150 HGKGIIHRDLKPENILL----NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 205
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSK 248
+ + SD+WALGC++ ++++G + + I Q II E+ PE +
Sbjct: 206 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ--KIIKLEYDFPE---KFFP 260
Query: 249 EARDFLRRCFV 259
+ARD + + V
Sbjct: 261 KARDLVEKLLV 271
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 114/216 (52%), Gaps = 17/216 (7%)
Query: 85 YNLLLEYAAGGTLGDLIEKCNGNG-LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNI 143
Y ++LE GG +L +K GN L E + + +L + ++H++G +H D+KP+N+
Sbjct: 89 YYIVLELMEGG---ELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENV 145
Query: 144 LLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS---D 200
LL ++Q + KI D G S+ ++ GTP YLAPE +V + D
Sbjct: 146 LL-SSQEEDCLIKITDFG---HSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVD 201
Query: 201 IWALGCVVLEMLSGRQAWVV-KEDCSI-DQLFSIIGDEHSLPEIPSRVSKEARDFLRRCF 258
W+LG ++ LSG + + S+ DQ+ S G + +PE+ + VS++A D +++
Sbjct: 202 CWSLGVILFICLSGYPPFSEHRTQVSLKDQITS--GKYNFIPEVWAEVSEKALDLVKKLL 259
Query: 259 VRKPAFRFTAEMLLDDPFVKGVDEELSRELEGDYSQ 294
V P RFT E L P+++ DE++ R+ + S+
Sbjct: 260 VVDPKARFTTEEALRHPWLQ--DEDMKRKFQDLLSE 293
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 114/216 (52%), Gaps = 17/216 (7%)
Query: 85 YNLLLEYAAGGTLGDLIEKCNGNG-LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNI 143
Y ++LE GG +L +K GN L E + + +L + ++H++G +H D+KP+N+
Sbjct: 89 YYIVLELMEGG---ELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENV 145
Query: 144 LLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS---D 200
LL ++Q + KI D G S+ ++ GTP YLAPE +V + D
Sbjct: 146 LL-SSQEEDCLIKITDFG---HSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVD 201
Query: 201 IWALGCVVLEMLSGRQAWVV-KEDCSI-DQLFSIIGDEHSLPEIPSRVSKEARDFLRRCF 258
W+LG ++ LSG + + S+ DQ+ S G + +PE+ + VS++A D +++
Sbjct: 202 CWSLGVILFICLSGYPPFSEHRTQVSLKDQITS--GKYNFIPEVWAEVSEKALDLVKKLL 259
Query: 259 VRKPAFRFTAEMLLDDPFVKGVDEELSRELEGDYSQ 294
V P RFT E L P+++ DE++ R+ + S+
Sbjct: 260 VVDPKARFTTEEALRHPWLQ--DEDMKRKFQDLLSE 293
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 114/216 (52%), Gaps = 17/216 (7%)
Query: 85 YNLLLEYAAGGTLGDLIEKCNGNG-LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNI 143
Y ++LE GG +L +K GN L E + + +L + ++H++G +H D+KP+N+
Sbjct: 88 YYIVLELMEGG---ELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENV 144
Query: 144 LLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS---D 200
LL ++Q + KI D G S+ ++ GTP YLAPE +V + D
Sbjct: 145 LL-SSQEEDCLIKITDFG---HSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVD 200
Query: 201 IWALGCVVLEMLSGRQAWVV-KEDCSI-DQLFSIIGDEHSLPEIPSRVSKEARDFLRRCF 258
W+LG ++ LSG + + S+ DQ+ S G + +PE+ + VS++A D +++
Sbjct: 201 CWSLGVILFICLSGYPPFSEHRTQVSLKDQITS--GKYNFIPEVWAEVSEKALDLVKKLL 258
Query: 259 VRKPAFRFTAEMLLDDPFVKGVDEELSRELEGDYSQ 294
V P RFT E L P+++ DE++ R+ + S+
Sbjct: 259 VVDPKARFTTEEALRHPWLQ--DEDMKRKFQDLLSE 292
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 100/198 (50%), Gaps = 23/198 (11%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
+++E+ GG L D++ N E+ + +L + ++H+ G +H D+K D+ILL
Sbjct: 119 VVMEFLEGGALTDIVTHTRMN---EEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILL- 174
Query: 147 ATQSGKFVAKIADLGV-AKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALG 205
T G+ K++D G A+ S+ ++K + GTP ++APE + + DIW+LG
Sbjct: 175 -TSDGRI--KLSDFGFCAQVSKEVPKRK---XLVGTPYWMAPEVISRLPYGTEVDIWSLG 228
Query: 206 CVVLEMLSGRQAWVVKEDCSI-----DQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVR 260
+V+EM+ G + + D L + D H +VS R FL VR
Sbjct: 229 IMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPRVKDLH-------KVSSVLRGFLDLMLVR 281
Query: 261 KPAFRFTAEMLLDDPFVK 278
+P+ R TA+ LL PF+K
Sbjct: 282 EPSQRATAQELLGHPFLK 299
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 114/216 (52%), Gaps = 17/216 (7%)
Query: 85 YNLLLEYAAGGTLGDLIEKCNGNG-LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNI 143
Y ++LE GG +L +K GN L E + + +L + ++H++G +H D+KP+N+
Sbjct: 89 YYIVLELMEGG---ELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENV 145
Query: 144 LLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS---D 200
LL ++Q + KI D G S+ ++ GTP YLAPE +V + D
Sbjct: 146 LL-SSQEEDCLIKITDFG---HSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVD 201
Query: 201 IWALGCVVLEMLSGRQAWVV-KEDCSI-DQLFSIIGDEHSLPEIPSRVSKEARDFLRRCF 258
W+LG ++ LSG + + S+ DQ+ S G + +PE+ + VS++A D +++
Sbjct: 202 CWSLGVILFICLSGYPPFSEHRTQVSLKDQITS--GKYNFIPEVWAEVSEKALDLVKKLL 259
Query: 259 VRKPAFRFTAEMLLDDPFVKGVDEELSRELEGDYSQ 294
V P RFT E L P+++ DE++ R+ + S+
Sbjct: 260 VVDPKARFTTEEALRHPWLQ--DEDMKRKFQDLLSE 293
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 112/211 (53%), Gaps = 17/211 (8%)
Query: 85 YNLLLEYAAGGTLGDLIEKCNGNG-LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNI 143
Y ++LE GG +L +K GN L E + + +L + ++H++G +H D+KP+N+
Sbjct: 228 YYIVLELMEGG---ELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENV 284
Query: 144 LLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS---D 200
LL ++Q + KI D G S+ ++ GTP YLAPE +V + D
Sbjct: 285 LL-SSQEEDCLIKITDFG---HSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVD 340
Query: 201 IWALGCVVLEMLSGRQAWVV-KEDCSI-DQLFSIIGDEHSLPEIPSRVSKEARDFLRRCF 258
W+LG ++ LSG + + S+ DQ+ S G + +PE+ + VS++A D +++
Sbjct: 341 CWSLGVILFICLSGYPPFSEHRTQVSLKDQITS--GKYNFIPEVWAEVSEKALDLVKKLL 398
Query: 259 VRKPAFRFTAEMLLDDPFVKGVDEELSRELE 289
V P RFT E L P+++ DE++ R+ +
Sbjct: 399 VVDPKARFTTEEALRHPWLQ--DEDMKRKFQ 427
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 114/216 (52%), Gaps = 17/216 (7%)
Query: 85 YNLLLEYAAGGTLGDLIEKCNGNG-LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNI 143
Y ++LE GG +L +K GN L E + + +L + ++H++G +H D+KP+N+
Sbjct: 95 YYIVLELMEGG---ELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENV 151
Query: 144 LLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS---D 200
LL ++Q + KI D G S+ ++ GTP YLAPE +V + D
Sbjct: 152 LL-SSQEEDCLIKITDFG---HSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVD 207
Query: 201 IWALGCVVLEMLSGRQAWVV-KEDCSI-DQLFSIIGDEHSLPEIPSRVSKEARDFLRRCF 258
W+LG ++ LSG + + S+ DQ+ S G + +PE+ + VS++A D +++
Sbjct: 208 CWSLGVILFICLSGYPPFSEHRTQVSLKDQITS--GKYNFIPEVWAEVSEKALDLVKKLL 265
Query: 259 VRKPAFRFTAEMLLDDPFVKGVDEELSRELEGDYSQ 294
V P RFT E L P+++ DE++ R+ + S+
Sbjct: 266 VVDPKARFTTEEALRHPWLQ--DEDMKRKFQDLLSE 299
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 133/294 (45%), Gaps = 30/294 (10%)
Query: 14 IGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLECFGE 73
+G G+FG V+ A+ K S + E+E+ D + + C
Sbjct: 45 LGDGAFGKVYKAQNKETSVL----------AAAKVIDTKSEEELEDYMVEIDILASCDHP 94
Query: 74 EITMGENGEMAYN---LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHD 130
I + N +L+E+ AGG + ++ + L E ++ + L+ + ++HD
Sbjct: 95 NIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE-RPLTESQIQVVCKQTLDALNYLHD 153
Query: 131 SGYVHCDVKPDNILLVATQSGKFVAKIADLGV-AKRSRHCKRQKFDPSMRGTPLYLAPET 189
+ +H D+K NIL T G K+AD GV AK +R +R+ S GTP ++APE
Sbjct: 154 NKIIHRDLKAGNILF--TLDGDI--KLADFGVSAKNTRXIQRRD---SFIGTPYWMAPEV 206
Query: 190 VV-QHMQEAP----SDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPS 244
V+ + ++ P +D+W+LG ++EM E + L I E PS
Sbjct: 207 VMCETSKDRPYDYKADVWSLGITLIEMAEIEPPH--HELNPMRVLLKIAKSEPPTLAQPS 264
Query: 245 RVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGVDEELSRELEGDYSQGEVT 298
R S +DFL++C + R+T LL PFV + REL + ++ EVT
Sbjct: 265 RWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKPIRELIAE-AKAEVT 317
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 123/273 (45%), Gaps = 36/273 (13%)
Query: 14 IGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLECFGE 73
IG+GS G V IA +S+ + L+K++ N + + E
Sbjct: 159 IGEGSTGIVCIATVRSSGKLV----------AVKKMDLRKQQRRELLFNEVVIMRDYQHE 208
Query: 74 EITMGENGEMAYN---LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHD 130
+ N + + +++E+ GG L D++ N E+ + +L+ + +H
Sbjct: 209 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMN---EEQIAAVCLAVLQALSVLHA 265
Query: 131 SGYVHCDVKPDNILLVATQSGKFVAKIADLGV-AKRSRHCKRQKFDPSMRGTPLYLAPET 189
G +H D+K D+ILL T G+ K++D G A+ S+ R+K + GTP ++APE
Sbjct: 266 QGVIHRDIKSDSILL--THDGR--VKLSDFGFCAQVSKEVPRRK---XLVGTPYWMAPEL 318
Query: 190 VVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSI-----DQLFSIIGDEHSLPEIPS 244
+ + DIW+LG +V+EM+ G + + D L + + H
Sbjct: 319 ISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLH------- 371
Query: 245 RVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
+VS + FL R VR PA R TA LL PF+
Sbjct: 372 KVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 404
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 112/211 (53%), Gaps = 17/211 (8%)
Query: 85 YNLLLEYAAGGTLGDLIEKCNGNG-LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNI 143
Y ++LE GG +L +K GN L E + + +L + ++H++G +H D+KP+N+
Sbjct: 214 YYIVLELMEGG---ELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENV 270
Query: 144 LLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS---D 200
LL ++Q + KI D G S+ ++ GTP YLAPE +V + D
Sbjct: 271 LL-SSQEEDCLIKITDFG---HSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVD 326
Query: 201 IWALGCVVLEMLSGRQAWVV-KEDCSI-DQLFSIIGDEHSLPEIPSRVSKEARDFLRRCF 258
W+LG ++ LSG + + S+ DQ+ S G + +PE+ + VS++A D +++
Sbjct: 327 CWSLGVILFICLSGYPPFSEHRTQVSLKDQITS--GKYNFIPEVWAEVSEKALDLVKKLL 384
Query: 259 VRKPAFRFTAEMLLDDPFVKGVDEELSRELE 289
V P RFT E L P+++ DE++ R+ +
Sbjct: 385 VVDPKARFTTEEALRHPWLQ--DEDMKRKFQ 413
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 133/294 (45%), Gaps = 30/294 (10%)
Query: 14 IGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLECFGE 73
+G G+FG V+ A+ K S + E+E+ D + + C
Sbjct: 45 LGDGAFGKVYKAQNKETSVL----------AAAKVIDTKSEEELEDYMVEIDILASCDHP 94
Query: 74 EITMGENGEMAYN---LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHD 130
I + N +L+E+ AGG + ++ + L E ++ + L+ + ++HD
Sbjct: 95 NIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE-RPLTESQIQVVCKQTLDALNYLHD 153
Query: 131 SGYVHCDVKPDNILLVATQSGKFVAKIADLGV-AKRSRHCKRQKFDPSMRGTPLYLAPET 189
+ +H D+K NIL T G K+AD GV AK +R +R+ S GTP ++APE
Sbjct: 154 NKIIHRDLKAGNILF--TLDGDI--KLADFGVSAKNTRTIQRRD---SFIGTPYWMAPEV 206
Query: 190 VV-QHMQEAP----SDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPS 244
V+ + ++ P +D+W+LG ++EM E + L I E PS
Sbjct: 207 VMCETSKDRPYDYKADVWSLGITLIEMAEIEPPH--HELNPMRVLLKIAKSEPPTLAQPS 264
Query: 245 RVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGVDEELSRELEGDYSQGEVT 298
R S +DFL++C + R+T LL PFV + REL + ++ EVT
Sbjct: 265 RWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKPIRELIAE-AKAEVT 317
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 125/270 (46%), Gaps = 30/270 (11%)
Query: 14 IGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLECFGE 73
IG+GS G V IA +S+ + L+K++ N + + E
Sbjct: 39 IGEGSTGIVCIATVRSSGKLV----------AVKKMDLRKQQRRELLFNEVVIMRDYQHE 88
Query: 74 EITMGENGEMAYN---LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHD 130
+ N + + +++E+ GG L D++ N E+ + +L+ + +H
Sbjct: 89 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMN---EEQIAAVCLAVLQALSVLHA 145
Query: 131 SGYVHCDVKPDNILLVATQSGKFVAKIADLGV-AKRSRHCKRQKFDPSMRGTPLYLAPET 189
G +H D+K D+ILL T G+ K++D G A+ S+ R+K + GTP ++APE
Sbjct: 146 QGVIHRDIKSDSILL--THDGR--VKLSDFGFCAQVSKEVPRRK---XLVGTPYWMAPEL 198
Query: 190 VVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPS--RVS 247
+ + DIW+LG +V+EM+ G + + ++ ++ P + + +VS
Sbjct: 199 ISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR----DNLPPRLKNLHKVS 254
Query: 248 KEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
+ FL R VR PA R TA LL PF+
Sbjct: 255 PSLKGFLDRLLVRDPAQRATAAELLKHPFL 284
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 125/270 (46%), Gaps = 30/270 (11%)
Query: 14 IGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLECFGE 73
IG+GS G V IA +S+ + L+K++ N + + E
Sbjct: 37 IGEGSTGIVCIATVRSSGKLV----------AVKKMDLRKQQRRELLFNEVVIMRDYQHE 86
Query: 74 EITMGENGEMAYN---LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHD 130
+ N + + +++E+ GG L D++ N E+ + +L+ + +H
Sbjct: 87 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMN---EEQIAAVCLAVLQALSVLHA 143
Query: 131 SGYVHCDVKPDNILLVATQSGKFVAKIADLGV-AKRSRHCKRQKFDPSMRGTPLYLAPET 189
G +H D+K D+ILL T G+ K++D G A+ S+ R+K + GTP ++APE
Sbjct: 144 QGVIHRDIKSDSILL--THDGR--VKLSDFGFCAQVSKEVPRRK---XLVGTPYWMAPEL 196
Query: 190 VVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPS--RVS 247
+ + DIW+LG +V+EM+ G + + ++ ++ P + + +VS
Sbjct: 197 ISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR----DNLPPRLKNLHKVS 252
Query: 248 KEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
+ FL R VR PA R TA LL PF+
Sbjct: 253 PSLKGFLDRLLVRDPAQRATAAELLKHPFL 282
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 125/270 (46%), Gaps = 30/270 (11%)
Query: 14 IGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLECFGE 73
IG+GS G V IA +S+ + L+K++ N + + E
Sbjct: 28 IGEGSTGIVCIATVRSSGKLV----------AVKKMDLRKQQRRELLFNEVVIMRDYQHE 77
Query: 74 EITMGENGEMAYN---LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHD 130
+ N + + +++E+ GG L D++ N E+ + +L+ + +H
Sbjct: 78 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMN---EEQIAAVCLAVLQALSVLHA 134
Query: 131 SGYVHCDVKPDNILLVATQSGKFVAKIADLGV-AKRSRHCKRQKFDPSMRGTPLYLAPET 189
G +H D+K D+ILL T G+ K++D G A+ S+ R+K + GTP ++APE
Sbjct: 135 QGVIHRDIKSDSILL--THDGR--VKLSDFGFCAQVSKEVPRRK---XLVGTPYWMAPEL 187
Query: 190 VVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPS--RVS 247
+ + DIW+LG +V+EM+ G + + ++ ++ P + + +VS
Sbjct: 188 ISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR----DNLPPRLKNLHKVS 243
Query: 248 KEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
+ FL R VR PA R TA LL PF+
Sbjct: 244 PSLKGFLDRLLVRDPAQRATAAELLKHPFL 273
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 123/273 (45%), Gaps = 36/273 (13%)
Query: 14 IGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLECFGE 73
IG+GS G V IA +S+ + L+K++ N + + E
Sbjct: 82 IGEGSTGIVCIATVRSSGKLV----------AVKKMDLRKQQRRELLFNEVVIMRDYQHE 131
Query: 74 EITMGENGEMAYN---LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHD 130
+ N + + +++E+ GG L D++ N E+ + +L+ + +H
Sbjct: 132 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMN---EEQIAAVCLAVLQALSVLHA 188
Query: 131 SGYVHCDVKPDNILLVATQSGKFVAKIADLGV-AKRSRHCKRQKFDPSMRGTPLYLAPET 189
G +H D+K D+ILL T G+ K++D G A+ S+ R+K + GTP ++APE
Sbjct: 189 QGVIHRDIKSDSILL--THDGR--VKLSDFGFCAQVSKEVPRRK---XLVGTPYWMAPEL 241
Query: 190 VVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSI-----DQLFSIIGDEHSLPEIPS 244
+ + DIW+LG +V+EM+ G + + D L + + H
Sbjct: 242 ISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLH------- 294
Query: 245 RVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
+VS + FL R VR PA R TA LL PF+
Sbjct: 295 KVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 327
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 125/270 (46%), Gaps = 30/270 (11%)
Query: 14 IGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLECFGE 73
IG+GS G V IA +S+ + L+K++ N + + E
Sbjct: 32 IGEGSTGIVCIATVRSSGKLV----------AVKKMDLRKQQRRELLFNEVVIMRDYQHE 81
Query: 74 EITMGENGEMAYN---LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHD 130
+ N + + +++E+ GG L D++ N E+ + +L+ + +H
Sbjct: 82 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMN---EEQIAAVCLAVLQALSVLHA 138
Query: 131 SGYVHCDVKPDNILLVATQSGKFVAKIADLGV-AKRSRHCKRQKFDPSMRGTPLYLAPET 189
G +H D+K D+ILL T G+ K++D G A+ S+ R+K + GTP ++APE
Sbjct: 139 QGVIHRDIKSDSILL--THDGR--VKLSDFGFCAQVSKEVPRRK---XLVGTPYWMAPEL 191
Query: 190 VVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPS--RVS 247
+ + DIW+LG +V+EM+ G + + ++ ++ P + + +VS
Sbjct: 192 ISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR----DNLPPRLKNLHKVS 247
Query: 248 KEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
+ FL R VR PA R TA LL PF+
Sbjct: 248 PSLKGFLDRLLVRDPAQRATAAELLKHPFL 277
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 117/251 (46%), Gaps = 19/251 (7%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSS--FLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
G+++G+GSF V +A+ + S + L + +E++V L+ PF +
Sbjct: 35 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFV 93
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
+ + T ++ ++ + L YA G L I K E R +T I+ + ++
Sbjct: 94 KLY---FTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYL 146
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
H G +H D+KP+NILL + +I D G AK +Q + GT Y++PE
Sbjct: 147 HGKGIIHRDLKPENILL----NEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPE 202
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSK 248
+ + SD+WALGC++ ++++G + + I Q II E+ PE +
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ--KIIKLEYDFPE---KFFP 257
Query: 249 EARDFLRRCFV 259
+ARD + + V
Sbjct: 258 KARDLVEKLLV 268
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 98/199 (49%), Gaps = 18/199 (9%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
L++E+ G++ DLI+ GN L E+ + + R IL G+ H+H +H D+K N+LL
Sbjct: 104 LVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLT 163
Query: 147 ATQSGKFVAKIADLGV-AKRSRHCKRQKFDPSMRGTPLYLAPETVV-----QHMQEAPSD 200
K V D GV A+ R R+ + GTP ++APE + + SD
Sbjct: 164 ENAEVKLV----DFGVSAQLDRTVGRRN---TFIGTPYWMAPEVIACDENPDATYDFKSD 216
Query: 201 IWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRV-SKEARDFLRRCFV 259
+W+LG +EM G A + + + LF I + P + S+ SK+ + F+ C V
Sbjct: 217 LWSLGITAIEMAEG--APPLCDMHPMRALFLI--PRNPAPRLKSKKWSKKFQSFIESCLV 272
Query: 260 RKPAFRFTAEMLLDDPFVK 278
+ + R E L+ PF++
Sbjct: 273 KNHSQRPATEQLMKHPFIR 291
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 95/195 (48%), Gaps = 8/195 (4%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
L+LE +GG L D + L E + F + IL+G+ ++H H D+KP+NI+L+
Sbjct: 85 LILELVSGGELFDFL--AEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLL 142
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGC 206
K+ D G+A + K ++ GTP ++APE V +D+W++G
Sbjct: 143 DKNVPNPRIKLIDFGIAHKIEAGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGV 199
Query: 207 VVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSL-PEIPSRVSKEARDFLRRCFVRKPAFR 265
+ +LSG ++ + + L +I + E S S+ A+DF+RR V+ P R
Sbjct: 200 ITYILLSGASPFL--GETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRR 257
Query: 266 FTAEMLLDDPFVKGV 280
T L+ ++K +
Sbjct: 258 MTIAQSLEHSWIKAI 272
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 129/274 (47%), Gaps = 25/274 (9%)
Query: 14 IGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGC--PFVLECF 71
+G G+FG V+ AK K + L L+ + L C P++++
Sbjct: 27 LGDGAFGKVYKAKNKETGA----LAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLL 82
Query: 72 GEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDS 131
G +G++ +++E+ GG + ++ + + GL E ++ R +LE + +H
Sbjct: 83 G---AYYHDGKLW--IMIEFCPGGAVDAIMLELD-RGLTEPQIQVVCRQMLEALNFLHSK 136
Query: 132 GYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVV 191
+H D+K N+L+ T G ++AD GV+ +++ K + S GTP ++APE V+
Sbjct: 137 RIIHRDLKAGNVLM--TLEGDI--RLADFGVS--AKNLKTLQKRDSFIGTPYWMAPEVVM 190
Query: 192 -QHMQEAP----SDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRV 246
+ M++ P +DIW+LG ++EM E + L I + PS+
Sbjct: 191 CETMKDTPYDYKADIWSLGITLIEMAQIEPPH--HELNPMRVLLKIAKSDPPTLLTPSKW 248
Query: 247 SKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGV 280
S E RDFL+ + P R +A LL+ PFV +
Sbjct: 249 SVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSI 282
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 116/251 (46%), Gaps = 19/251 (7%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSS--FLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
G+++G+GSF V +A+ + S + L + +E++V L+ PF +
Sbjct: 35 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFV 93
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
+ + T ++ ++ + L YA G L I K E R +T I+ + ++
Sbjct: 94 KLY---FTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYL 146
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
H G +H D+KP+NILL + +I D G AK +Q GT Y++PE
Sbjct: 147 HGKGIIHRDLKPENILL----NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSK 248
+ + SD+WALGC++ ++++G + + I Q II E+ PE +
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ--KIIKLEYDFPE---KFFP 257
Query: 249 EARDFLRRCFV 259
+ARD + + V
Sbjct: 258 KARDLVEKLLV 268
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 116/251 (46%), Gaps = 19/251 (7%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSS--FLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
G+++G+GSF V +A+ + S + L + +E++V L+ PF +
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFV 95
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
+ + T ++ ++ + L YA G L I K E R +T I+ + ++
Sbjct: 96 KLY---FTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYL 148
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
H G +H D+KP+NILL + +I D G AK +Q GT Y++PE
Sbjct: 149 HGKGIIHRDLKPENILL----NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSK 248
+ + SD+WALGC++ ++++G + + I Q II E+ PE +
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ--KIIKLEYDFPE---KFFP 259
Query: 249 EARDFLRRCFV 259
+ARD + + V
Sbjct: 260 KARDLVEKLLV 270
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 129/274 (47%), Gaps = 25/274 (9%)
Query: 14 IGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGC--PFVLECF 71
+G G+FG V+ AK K + L L+ + L C P++++
Sbjct: 19 LGDGAFGKVYKAKNKETGA----LAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLL 74
Query: 72 GEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDS 131
G +G++ +++E+ GG + ++ + + GL E ++ R +LE + +H
Sbjct: 75 G---AYYHDGKLW--IMIEFCPGGAVDAIMLELD-RGLTEPQIQVVCRQMLEALNFLHSK 128
Query: 132 GYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVV 191
+H D+K N+L+ T G ++AD GV+ ++ QK D S GTP ++APE V+
Sbjct: 129 RIIHRDLKAGNVLM--TLEGDI--RLADFGVSAKNLKT-LQKRD-SFIGTPYWMAPEVVM 182
Query: 192 -QHMQEAP----SDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRV 246
+ M++ P +DIW+LG ++EM E + L I + PS+
Sbjct: 183 CETMKDTPYDYKADIWSLGITLIEMAQIEPPH--HELNPMRVLLKIAKSDPPTLLTPSKW 240
Query: 247 SKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGV 280
S E RDFL+ + P R +A LL+ PFV +
Sbjct: 241 SVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSI 274
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 116/251 (46%), Gaps = 19/251 (7%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSS--FLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
G+++G+GSF V +A+ + S + L + +E++V L+ PF +
Sbjct: 35 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFV 93
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
+ + T ++ ++ + L YA G L I K E R +T I+ + ++
Sbjct: 94 KLY---FTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYL 146
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
H G +H D+KP+NILL + +I D G AK +Q GT Y++PE
Sbjct: 147 HGKGIIHRDLKPENILL----NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSK 248
+ + SD+WALGC++ ++++G + + I Q II E+ PE +
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ--KIIKLEYDFPE---KFFP 257
Query: 249 EARDFLRRCFV 259
+ARD + + V
Sbjct: 258 KARDLVEKLLV 268
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 116/251 (46%), Gaps = 19/251 (7%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSS--FLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
G+++G+GSF V +A+ + S + L + +E++V L+ PF +
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFV 95
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
+ + T ++ ++ + L YA G L I K E R +T I+ + ++
Sbjct: 96 KLY---FTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYL 148
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
H G +H D+KP+NILL + +I D G AK +Q GT Y++PE
Sbjct: 149 HGKGIIHRDLKPENILL----NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSK 248
+ + SD+WALGC++ ++++G + + I Q II E+ PE +
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ--KIIKLEYDFPE---KFFP 259
Query: 249 EARDFLRRCFV 259
+ARD + + V
Sbjct: 260 KARDLVEKLLV 270
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 116/251 (46%), Gaps = 19/251 (7%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSS--FLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
G+++G+GSF V +A+ + S + L + +E++V L+ PF +
Sbjct: 19 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFV 77
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
+ + T ++ ++ + L YA G L I K E R +T I+ + ++
Sbjct: 78 KLY---FTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYL 130
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
H G +H D+KP+NILL + +I D G AK +Q GT Y++PE
Sbjct: 131 HGKGIIHRDLKPENILL----NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 186
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSK 248
+ + SD+WALGC++ ++++G + + I Q II E+ PE +
Sbjct: 187 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ--KIIKLEYDFPE---KFFP 241
Query: 249 EARDFLRRCFV 259
+ARD + + V
Sbjct: 242 KARDLVEKLLV 252
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 116/251 (46%), Gaps = 19/251 (7%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSS--FLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
G+++G+GSF V +A+ + S + L + +E++V L+ PF +
Sbjct: 12 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFV 70
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
+ + T ++ ++ + L YA G L I K E R +T I+ + ++
Sbjct: 71 KLY---FTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYL 123
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
H G +H D+KP+NILL + +I D G AK +Q GT Y++PE
Sbjct: 124 HGKGIIHRDLKPENILL----NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 179
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSK 248
+ + SD+WALGC++ ++++G + + I Q II E+ PE +
Sbjct: 180 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ--KIIKLEYDFPE---KFFP 234
Query: 249 EARDFLRRCFV 259
+ARD + + V
Sbjct: 235 KARDLVEKLLV 245
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 116/251 (46%), Gaps = 19/251 (7%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSS--FLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
G+++G+GSF V +A+ + S + L + +E++V L+ PF +
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFV 95
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
+ + T ++ ++ + L YA G L I K E R +T I+ + ++
Sbjct: 96 KLY---FTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYL 148
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
H G +H D+KP+NILL + +I D G AK +Q GT Y++PE
Sbjct: 149 HGKGIIHRDLKPENILL----NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSK 248
+ + SD+WALGC++ ++++G + + I Q II E+ PE +
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ--KIIKLEYDFPE---KFFP 259
Query: 249 EARDFLRRCFV 259
+ARD + + V
Sbjct: 260 KARDLVEKLLV 270
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 116/251 (46%), Gaps = 19/251 (7%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSS--FLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
G+++G+GSF V +A+ + S + L + +E++V L+ PF +
Sbjct: 34 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFV 92
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
+ + T ++ ++ + L YA G L I K E R +T I+ + ++
Sbjct: 93 KLY---FTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYL 145
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
H G +H D+KP+NILL + +I D G AK +Q GT Y++PE
Sbjct: 146 HGKGIIHRDLKPENILL----NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 201
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSK 248
+ + SD+WALGC++ ++++G + + I Q II E+ PE +
Sbjct: 202 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ--KIIKLEYDFPE---KFFP 256
Query: 249 EARDFLRRCFV 259
+ARD + + V
Sbjct: 257 KARDLVEKLLV 267
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 116/251 (46%), Gaps = 19/251 (7%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSS--FLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
G+++G+GSF V +A+ + S + L + +E++V L+ PF +
Sbjct: 38 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFV 96
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
+ + T ++ ++ + L YA G L I K E R +T I+ + ++
Sbjct: 97 KLY---FTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYL 149
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
H G +H D+KP+NILL + +I D G AK +Q GT Y++PE
Sbjct: 150 HGKGIIHRDLKPENILL----NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 205
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSK 248
+ + SD+WALGC++ ++++G + + I Q II E+ PE +
Sbjct: 206 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ--KIIKLEYDFPE---KFFP 260
Query: 249 EARDFLRRCFV 259
+ARD + + V
Sbjct: 261 KARDLVEKLLV 271
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 116/251 (46%), Gaps = 19/251 (7%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSS--FLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
G+++G+GSF V +A+ + S + L + +E++V L+ PF +
Sbjct: 13 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFV 71
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
+ + T ++ ++ + L YA G L I K E R +T I+ + ++
Sbjct: 72 KLY---FTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYL 124
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
H G +H D+KP+NILL + +I D G AK +Q GT Y++PE
Sbjct: 125 HGKGIIHRDLKPENILL----NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 180
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSK 248
+ + SD+WALGC++ ++++G + + I Q II E+ PE +
Sbjct: 181 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ--KIIKLEYDFPE---KFFP 235
Query: 249 EARDFLRRCFV 259
+ARD + + V
Sbjct: 236 KARDLVEKLLV 246
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 116/251 (46%), Gaps = 19/251 (7%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSS--FLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
G+++G+GSF V +A+ + S + L + +E++V L+ PF +
Sbjct: 15 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFV 73
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
+ + T ++ ++ + L YA G L I K E R +T I+ + ++
Sbjct: 74 KLY---FTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYL 126
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
H G +H D+KP+NILL + +I D G AK +Q GT Y++PE
Sbjct: 127 HGKGIIHRDLKPENILL----NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 182
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSK 248
+ + SD+WALGC++ ++++G + + I Q II E+ PE +
Sbjct: 183 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ--KIIKLEYDFPE---KFFP 237
Query: 249 EARDFLRRCFV 259
+ARD + + V
Sbjct: 238 KARDLVEKLLV 248
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 116/251 (46%), Gaps = 19/251 (7%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSS--FLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
G+++G+GSF V +A+ + S + L + +E++V L+ PF +
Sbjct: 14 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFV 72
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
+ + T ++ ++ + L YA G L I K E R +T I+ + ++
Sbjct: 73 KLY---FTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYL 125
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
H G +H D+KP+NILL + +I D G AK +Q GT Y++PE
Sbjct: 126 HGKGIIHRDLKPENILL----NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 181
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSK 248
+ + SD+WALGC++ ++++G + + I Q II E+ PE +
Sbjct: 182 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ--KIIKLEYDFPE---KFFP 236
Query: 249 EARDFLRRCFV 259
+ARD + + V
Sbjct: 237 KARDLVEKLLV 247
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 115/251 (45%), Gaps = 19/251 (7%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSS--FLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
G+++G+GSF V +A+ + S + L + +E++V L+ PF +
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFV 95
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
+ + T ++ ++ + L YA G L I K E R +T I+ + ++
Sbjct: 96 KLY---FTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYL 148
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
H G +H D+KP+NILL + +I D G AK +Q GT Y++PE
Sbjct: 149 HGKGIIHRDLKPENILL----NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSK 248
+ + SD+WALGC++ ++++G + + I II E+ PE +
Sbjct: 205 LLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLI--FAKIIKLEYDFPE---KFFP 259
Query: 249 EARDFLRRCFV 259
+ARD + + V
Sbjct: 260 KARDLVEKLLV 270
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 132/294 (44%), Gaps = 30/294 (10%)
Query: 14 IGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLECFGE 73
+G G+FG V+ A+ K S + E+E+ D + + C
Sbjct: 45 LGDGAFGKVYKAQNKETSVL----------AAAKVIDTKSEEELEDYMVEIDILASCDHP 94
Query: 74 EITMGENGEMAYN---LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHD 130
I + N +L+E+ AGG + ++ + L E ++ + L+ + ++HD
Sbjct: 95 NIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE-RPLTESQIQVVCKQTLDALNYLHD 153
Query: 131 SGYVHCDVKPDNILLVATQSGKFVAKIADLGV-AKRSRHCKRQKFDPSMRGTPLYLAPET 189
+ +H D+K NIL T G K+AD GV AK +R +R+ GTP ++APE
Sbjct: 154 NKIIHRDLKAGNILF--TLDGDI--KLADFGVSAKNTRXIQRRD---XFIGTPYWMAPEV 206
Query: 190 VV-QHMQEAP----SDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPS 244
V+ + ++ P +D+W+LG ++EM E + L I E PS
Sbjct: 207 VMCETSKDRPYDYKADVWSLGITLIEMAEIEPPH--HELNPMRVLLKIAKSEPPTLAQPS 264
Query: 245 RVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGVDEELSRELEGDYSQGEVT 298
R S +DFL++C + R+T LL PFV + REL + ++ EVT
Sbjct: 265 RWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKPIRELIAE-AKAEVT 317
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 95/195 (48%), Gaps = 17/195 (8%)
Query: 87 LLLEYAAGGTLGDLI-EKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILL 145
+++EY AGG+L D++ E C + E + R L+ + +H + +H D+K DNILL
Sbjct: 94 VVMEYLAGGSLTDVVTETC----MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL 149
Query: 146 VATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALG 205
S K+ D G ++ Q +M GTP ++APE V + DIW+LG
Sbjct: 150 GMDGS----VKLTDFGFC--AQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLG 203
Query: 206 CVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEI--PSRVSKEARDFLRRCFVRKPA 263
+ +EM+ G ++ + L + G PE+ P ++S RDFL RC
Sbjct: 204 IMAIEMIEGEPPYLNENPLRALYLIATNGT----PELQNPEKLSAIFRDFLNRCLDMDVE 259
Query: 264 FRFTAEMLLDDPFVK 278
R +A+ LL F+K
Sbjct: 260 KRGSAKELLQHQFLK 274
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 98/198 (49%), Gaps = 8/198 (4%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
L+LE +GG L D + L E++ F + IL+G+ ++H H D+KP+NI+L+
Sbjct: 92 LILELVSGGELFDFL--AQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLL 149
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGC 206
K+ D G+A K ++ GTP ++APE V +D+W++G
Sbjct: 150 DKNIPIPHIKLIDFGLAHEIEDGVEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGV 206
Query: 207 VVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSL-PEIPSRVSKEARDFLRRCFVRKPAFR 265
+ +LSG ++ D + L +I + E S+ S+ A+DF+R+ V++ R
Sbjct: 207 ITYILLSGASPFL--GDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKR 264
Query: 266 FTAEMLLDDPFVKGVDEE 283
T + L P++ VD +
Sbjct: 265 LTIQEALRHPWITPVDNQ 282
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 98/198 (49%), Gaps = 8/198 (4%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
L+LE +GG L D + L E++ F + IL+G+ ++H H D+KP+NI+L+
Sbjct: 92 LILELVSGGELFDFL--AQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLL 149
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGC 206
K+ D G+A K ++ GTP ++APE V +D+W++G
Sbjct: 150 DKNIPIPHIKLIDFGLAHEIEDGVEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGV 206
Query: 207 VVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSL-PEIPSRVSKEARDFLRRCFVRKPAFR 265
+ +LSG ++ D + L +I + E S+ S+ A+DF+R+ V++ R
Sbjct: 207 ITYILLSGASPFL--GDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKR 264
Query: 266 FTAEMLLDDPFVKGVDEE 283
T + L P++ VD +
Sbjct: 265 LTIQEALRHPWITPVDNQ 282
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 120/258 (46%), Gaps = 24/258 (9%)
Query: 12 RVIGQGSFGCVFIAKPKSNSSF--LPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLE 69
+++G+GSFG VF+A+ K + F + L EK V PF+
Sbjct: 24 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 83
Query: 70 CFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIH 129
F T + + ++EY GG L I+ C+ L + I+ G+ +H
Sbjct: 84 MF---CTFQTKENLFF--VMEYLNGGDLMYHIQSCHKFDLSR--ATFYAAEIILGLQFLH 136
Query: 130 DSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSR--HCKRQKFDPSMRGTPLYLAP 187
G V+ D+K DNILL + G KIAD G+ K + K +F GTP Y+AP
Sbjct: 137 SKGIVYRDLKLDNILL--DKDGH--IKIADFGMCKENMLGDAKTNEF----CGTPDYIAP 188
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E ++ D W+ G ++ EML G+ + +++ ++LF I ++ P P +
Sbjct: 189 EILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE---EELFHSIRMDN--PFYPRWLE 243
Query: 248 KEARDFLRRCFVRKPAFR 265
KEA+D L + FVR+P R
Sbjct: 244 KEAKDLLVKLFVREPEKR 261
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 94/195 (48%), Gaps = 17/195 (8%)
Query: 87 LLLEYAAGGTLGDLI-EKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILL 145
+++EY AGG+L D++ E C + E + R L+ + +H + +H D+K DNILL
Sbjct: 94 VVMEYLAGGSLTDVVTETC----MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL 149
Query: 146 VATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALG 205
S K+ D G ++ Q M GTP ++APE V + DIW+LG
Sbjct: 150 GMDGS----VKLTDFGFC--AQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLG 203
Query: 206 CVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEI--PSRVSKEARDFLRRCFVRKPA 263
+ +EM+ G ++ + L + G PE+ P ++S RDFL RC
Sbjct: 204 IMAIEMIEGEPPYLNENPLRALYLIATNGT----PELQNPEKLSAIFRDFLNRCLEMDVE 259
Query: 264 FRFTAEMLLDDPFVK 278
R +A+ LL F+K
Sbjct: 260 KRGSAKELLQHQFLK 274
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 97/198 (48%), Gaps = 8/198 (4%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
L+LE +GG L D + L E++ F + IL+G+ ++H H D+KP+NI+L+
Sbjct: 92 LILELVSGGELFDFL--AQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLL 149
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGC 206
K+ D G+A K ++ GTP ++APE V +D+W++G
Sbjct: 150 DKNIPIPHIKLIDFGLAHEIEDGVEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGV 206
Query: 207 VVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSL-PEIPSRVSKEARDFLRRCFVRKPAFR 265
+ +LSG ++ D + L +I + E S S+ A+DF+R+ V++ R
Sbjct: 207 ITYILLSGASPFL--GDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKR 264
Query: 266 FTAEMLLDDPFVKGVDEE 283
T + L P++ VD +
Sbjct: 265 LTIQEALRHPWITPVDNQ 282
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 119/258 (46%), Gaps = 24/258 (9%)
Query: 12 RVIGQGSFGCVFIAKPKSNSSF--LPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLE 69
+++G+GSFG VF+A+ K + F + L EK V PF+
Sbjct: 23 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 82
Query: 70 CFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIH 129
F T + + ++EY GG L I+ C+ L + I+ G+ +H
Sbjct: 83 MF---CTFQTKENLFF--VMEYLNGGDLMYHIQSCHKFDLSR--ATFYAAEIILGLQFLH 135
Query: 130 DSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSR--HCKRQKFDPSMRGTPLYLAP 187
G V+ D+K DNILL + G KIAD G+ K + K F GTP Y+AP
Sbjct: 136 SKGIVYRDLKLDNILL--DKDGH--IKIADFGMCKENMLGDAKTNXF----CGTPDYIAP 187
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E ++ D W+ G ++ EML G+ + +++ ++LF I ++ P P +
Sbjct: 188 EILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE---EELFHSIRMDN--PFYPRWLE 242
Query: 248 KEARDFLRRCFVRKPAFR 265
KEA+D L + FVR+P R
Sbjct: 243 KEAKDLLVKLFVREPEKR 260
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 94/195 (48%), Gaps = 17/195 (8%)
Query: 87 LLLEYAAGGTLGDLI-EKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILL 145
+++EY AGG+L D++ E C + E + R L+ + +H + +H D+K DNILL
Sbjct: 94 VVMEYLAGGSLTDVVTETC----MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL 149
Query: 146 VATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALG 205
S K+ D G ++ Q M GTP ++APE V + DIW+LG
Sbjct: 150 GMDGS----VKLTDFGFC--AQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLG 203
Query: 206 CVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEI--PSRVSKEARDFLRRCFVRKPA 263
+ +EM+ G ++ + L + G PE+ P ++S RDFL RC
Sbjct: 204 IMAIEMIEGEPPYLNENPLRALYLIATNGT----PELQNPEKLSAIFRDFLNRCLDMDVE 259
Query: 264 FRFTAEMLLDDPFVK 278
R +A+ LL F+K
Sbjct: 260 KRGSAKELLQHQFLK 274
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 97/198 (48%), Gaps = 8/198 (4%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
L+LE +GG L D + L E++ F + IL+G+ ++H H D+KP+NI+L+
Sbjct: 92 LILELVSGGELFDFL--AQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLL 149
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGC 206
K+ D G+A K ++ GTP ++APE V +D+W++G
Sbjct: 150 DKNIPIPHIKLIDFGLAHEIEDGVEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGV 206
Query: 207 VVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSL-PEIPSRVSKEARDFLRRCFVRKPAFR 265
+ +LSG ++ D + L +I + E S S+ A+DF+R+ V++ R
Sbjct: 207 ITYILLSGASPFL--GDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKR 264
Query: 266 FTAEMLLDDPFVKGVDEE 283
T + L P++ VD +
Sbjct: 265 LTIQEALRHPWITPVDNQ 282
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 115/251 (45%), Gaps = 19/251 (7%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSS--FLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
G+++G+GSF +A+ + S + L + +E++V L+ PF +
Sbjct: 35 GKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFV 93
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
+ + T ++ ++ + L YA G L I K E R +T I+ + ++
Sbjct: 94 KLY---FTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYL 146
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
H G +H D+KP+NILL + +I D G AK +Q GT Y++PE
Sbjct: 147 HGKGIIHRDLKPENILL----NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSK 248
+ + SD+WALGC++ ++++G + + I Q II E+ PE +
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ--KIIKLEYDFPE---KFFP 257
Query: 249 EARDFLRRCFV 259
+ARD + + V
Sbjct: 258 KARDLVEKLLV 268
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 97/198 (48%), Gaps = 8/198 (4%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
L+LE +GG L D + L E++ F + IL+G+ ++H H D+KP+NI+L+
Sbjct: 92 LILELVSGGELFDFL--AQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLL 149
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGC 206
K+ D G+A K ++ GTP ++APE V +D+W++G
Sbjct: 150 DKNIPIPHIKLIDFGLAHEIEDGVEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGV 206
Query: 207 VVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSL-PEIPSRVSKEARDFLRRCFVRKPAFR 265
+ +LSG ++ D + L +I + E S S+ A+DF+R+ V++ R
Sbjct: 207 ITYILLSGASPFL--GDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKR 264
Query: 266 FTAEMLLDDPFVKGVDEE 283
T + L P++ VD +
Sbjct: 265 LTIQEALRHPWITPVDNQ 282
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 127/285 (44%), Gaps = 27/285 (9%)
Query: 13 VIGQ-GSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLECF 71
+IG+ G FG V+ A+ K S + E+E+ D + + C
Sbjct: 16 IIGELGDFGKVYKAQNKETSVL----------AAAKVIDTKSEEELEDYMVEIDILASCD 65
Query: 72 GEEITMGENGEMAYN---LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
I + N +L+E+ AGG + ++ + L E ++ + L+ + ++
Sbjct: 66 HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE-RPLTESQIQVVCKQTLDALNYL 124
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
HD+ +H D+K NIL T G K+AD GV+ ++ Q+ D S GTP ++APE
Sbjct: 125 HDNKIIHRDLKAGNILF--TLDGDI--KLADFGVSAKNTRTXIQRRD-SFIGTPYWMAPE 179
Query: 189 TVV-QHMQEAP----SDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIP 243
V+ + ++ P +D+W+LG ++EM E + L I E P
Sbjct: 180 VVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP--HHELNPMRVLLKIAKSEPPTLAQP 237
Query: 244 SRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGVDEELSREL 288
SR S +DFL++C + R+T LL PFV + REL
Sbjct: 238 SRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKPIREL 282
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 97/196 (49%), Gaps = 8/196 (4%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
L+LE +GG L D + L E++ F + IL+G+ ++H H D+KP+NI+L+
Sbjct: 92 LILELVSGGELFDFL--AQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLL 149
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGC 206
K+ D G+A K ++ GTP ++APE V +D+W++G
Sbjct: 150 DKNIPIPHIKLIDFGLAHEIEDGVEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGV 206
Query: 207 VVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSL-PEIPSRVSKEARDFLRRCFVRKPAFR 265
+ +LSG ++ D + L +I + E S+ S+ A+DF+R+ V++ R
Sbjct: 207 ITYILLSGASPFL--GDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKR 264
Query: 266 FTAEMLLDDPFVKGVD 281
T + L P++ VD
Sbjct: 265 LTIQEALRHPWITPVD 280
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 95/194 (48%), Gaps = 8/194 (4%)
Query: 85 YNLLLEYAAGGTL-GDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNI 143
+ L+ + GG L D++ + E D H + ILE + H H +G VH D+KP+N+
Sbjct: 78 HYLVFDLVTGGELFEDIVAR---EYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENL 134
Query: 144 LLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWA 203
LL + G V K+AD G+A + ++ F GTP YL+PE + + P D+WA
Sbjct: 135 LLASKSKGAAV-KLADFGLAIEVQGDQQAWF--GFAGTPGYLSPEVLRKDPYGKPVDMWA 191
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPA 263
G ++ +L G + ++ + Q + PE + V+ EA+D + + PA
Sbjct: 192 CGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDT-VTPEAKDLINKMLTINPA 250
Query: 264 FRFTAEMLLDDPFV 277
R TA L P++
Sbjct: 251 KRITASEALKHPWI 264
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 94/195 (48%), Gaps = 8/195 (4%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
L+LE +GG L D + L E + F + IL+G+ ++H H D+KP+NI+L+
Sbjct: 106 LILELVSGGELFDFL--AEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLL 163
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGC 206
K+ D G+A + K ++ GTP ++APE V +D+W++G
Sbjct: 164 DKNVPNPRIKLIDFGIAHKIEAGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGV 220
Query: 207 VVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSL-PEIPSRVSKEARDFLRRCFVRKPAFR 265
+ +LSG ++ + + L +I + E S S+ A+DF+RR V+ P R
Sbjct: 221 ITYILLSGASPFL--GETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRR 278
Query: 266 FTAEMLLDDPFVKGV 280
L+ ++K +
Sbjct: 279 MXIAQSLEHSWIKAI 293
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 125/270 (46%), Gaps = 25/270 (9%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSSF---LPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
GR +G+G FG V++A+ K NS F L L L++E E+ +L P +
Sbjct: 13 GRPLGKGKFGNVYLAREK-NSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNI 70
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
L +G + Y L+LEYA GT+ ++K + E+ + + + +
Sbjct: 71 LRLYG----YFHDSTRVY-LILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 123
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
H +H D+KP+N+LL +G+ KIAD G + + +R ++ GT YL P
Sbjct: 124 CHSKKVIHRDIKPENLLL--GSAGEL--KIADFGWSVHAPSSRRA----ALCGTLDYLPP 175
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E + M + D+W+LG + E L G+ + + + D I E + P+ V+
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQDTYKRISRVEFTFPDF---VT 230
Query: 248 KEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
+ ARD + R P+ R +L+ P++
Sbjct: 231 EGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 94/195 (48%), Gaps = 17/195 (8%)
Query: 87 LLLEYAAGGTLGDLI-EKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILL 145
+++EY AGG+L D++ E C + E + R L+ + +H + +H D+K DNILL
Sbjct: 95 VVMEYLAGGSLTDVVTETC----MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL 150
Query: 146 VATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALG 205
S K+ D G ++ Q M GTP ++APE V + DIW+LG
Sbjct: 151 GMDGS----VKLTDFGFC--AQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLG 204
Query: 206 CVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEI--PSRVSKEARDFLRRCFVRKPA 263
+ +EM+ G ++ + L + G PE+ P ++S RDFL RC
Sbjct: 205 IMAIEMIEGEPPYLNENPLRALYLIATNGT----PELQNPEKLSAIFRDFLNRCLEMDVE 260
Query: 264 FRFTAEMLLDDPFVK 278
R +A+ L+ F+K
Sbjct: 261 KRGSAKELIQHQFLK 275
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 115/251 (45%), Gaps = 19/251 (7%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSS--FLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
G+++G+GSF V +A+ + S + L + +E++V L+ PF +
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFV 95
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
+ + T ++ ++ + L YA G L I K E R +T I+ + ++
Sbjct: 96 KLY---FTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYL 148
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
H G +H D+KP+NILL + +I D G AK +Q GT Y++PE
Sbjct: 149 HGKGIIHRDLKPENILL----NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSK 248
+ + SD+WALGC++ ++++G + + I II E+ PE +
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLI--FAKIIKLEYDFPE---KFFP 259
Query: 249 EARDFLRRCFV 259
+ARD + + V
Sbjct: 260 KARDLVEKLLV 270
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 95/194 (48%), Gaps = 8/194 (4%)
Query: 85 YNLLLEYAAGGTL-GDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNI 143
+ L+ + GG L D++ + E D H + ILE + H H +G VH D+KP+N+
Sbjct: 78 HYLVFDLVTGGELFEDIVAR---EYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENL 134
Query: 144 LLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWA 203
LL + G V K+AD G+A + ++ F GTP YL+PE + + P D+WA
Sbjct: 135 LLASKSKGAAV-KLADFGLAIEVQGDQQAWF--GFAGTPGYLSPEVLRKDPYGKPVDMWA 191
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPA 263
G ++ +L G + ++ + Q + PE + V+ EA+D + + PA
Sbjct: 192 CGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDT-VTPEAKDLINKMLTINPA 250
Query: 264 FRFTAEMLLDDPFV 277
R TA L P++
Sbjct: 251 KRITASEALKHPWI 264
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 8/194 (4%)
Query: 85 YNLLLEYAAGGTL-GDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNI 143
+ L+ + GG L D++ + E D H ILE + HIH VH D+KP+N+
Sbjct: 105 HYLVFDLVTGGELFEDIVAR---EYYSEADASHCIHQILESVNHIHQHDIVHRDLKPENL 161
Query: 144 LLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWA 203
LL + G V K+AD G+A + ++ F GTP YL+PE + + P DIWA
Sbjct: 162 LLASKCKGAAV-KLADFGLAIEVQGEQQAWF--GFAGTPGYLSPEVLRKDPYGKPVDIWA 218
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPA 263
G ++ +L G + ++ + Q + PE + V+ EA++ + + PA
Sbjct: 219 CGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDT-VTPEAKNLINQMLTINPA 277
Query: 264 FRFTAEMLLDDPFV 277
R TA+ L P+V
Sbjct: 278 KRITADQALKHPWV 291
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 116/251 (46%), Gaps = 19/251 (7%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSS--FLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
G+++G+GSF V +A+ + S + L + +E++V L+ PF +
Sbjct: 40 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFV 98
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
+ + T ++ ++ + L YA G L I K E R +T I+ + ++
Sbjct: 99 KLY---FTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYL 151
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
H G +H D+KP+NILL + +I D G AK +Q GT Y++PE
Sbjct: 152 HGKGIIHRDLKPENILL----NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 207
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSK 248
+ + SD+WALGC++ ++++G + + I Q II E+ + P+
Sbjct: 208 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ--KIIKLEY---DFPAAFFP 262
Query: 249 EARDFLRRCFV 259
+ARD + + V
Sbjct: 263 KARDLVEKLLV 273
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 115/254 (45%), Gaps = 25/254 (9%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSS--FLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
G+++G+GSF V +A+ + S + L + +E++V L+ PF +
Sbjct: 42 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFV 100
Query: 69 E---CFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGI 125
+ CF ++ E Y L YA G L I K E R +T I+ +
Sbjct: 101 KLYFCF-------QDDEKLY-FGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSAL 150
Query: 126 GHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYL 185
++H G +H D+KP+NILL + +I D G AK +Q GT Y+
Sbjct: 151 EYLHGKGIIHRDLKPENILL----NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 206
Query: 186 APETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSR 245
+PE + + SD+WALGC++ ++++G + + I Q II E+ PE +
Sbjct: 207 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ--KIIKLEYDFPE---K 261
Query: 246 VSKEARDFLRRCFV 259
+ARD + + V
Sbjct: 262 FFPKARDLVEKLLV 275
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 93/194 (47%), Gaps = 8/194 (4%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
L+LE +GG L D + L E + F + IL+G+ ++H H D+KP+NI+L+
Sbjct: 92 LILELVSGGELFDFL--AEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLL 149
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGC 206
K+ D G+A + K ++ GTP ++APE V +D+W++G
Sbjct: 150 DKNVPNPRIKLIDFGIAHKIEAGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGV 206
Query: 207 VVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSL-PEIPSRVSKEARDFLRRCFVRKPAFR 265
+ +LSG ++ + + L +I + E S S+ A+DF+RR V+ P R
Sbjct: 207 ITYILLSGASPFL--GETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRR 264
Query: 266 FTAEMLLDDPFVKG 279
L+ ++K
Sbjct: 265 MXIAQSLEHSWIKA 278
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 126/273 (46%), Gaps = 17/273 (6%)
Query: 13 VIGQGSFGCVFIAKPK-SNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLECF 71
++G+GSFG V K + + + ++ + +E E+ L+ P +++ F
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH-PNIMKLF 87
Query: 72 GEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDS 131
EI + ++ ++ E GG L D I K E D + + GI ++H
Sbjct: 88 --EILEDSS---SFYIVGELYTGGELFDEIIK--RKRFSEHDAARIIKQVFSGITYMHKH 140
Query: 132 GYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMR-GTPLYLAPETV 190
VH D+KP+NILL + + + KI D G++ C +Q R GT Y+APE V
Sbjct: 141 NIVHRDLKPENILLESKEKDCDI-KIIDFGLST----CFQQNTKMKDRIGTAYYIAPE-V 194
Query: 191 VQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEA 250
++ + D+W+ G ++ +LSG + K + I + LP+ + +S +A
Sbjct: 195 LRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRT-ISDDA 253
Query: 251 RDFLRRCFVRKPAFRFTAEMLLDDPFVKGVDEE 283
+D +R+ P+ R TA L+ P+++ E
Sbjct: 254 KDLIRKMLTFHPSLRITATQCLEHPWIQKYSSE 286
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 125/270 (46%), Gaps = 25/270 (9%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSSFL--PPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
GR +G+G FG V++A+ K + L L L++E E+ +L P +L
Sbjct: 14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNIL 72
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
+G + Y L+LEYA GT+ ++K + E+ + + + +
Sbjct: 73 RLYG----YFHDATRVY-LILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYC 125
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
H +H D+KP+N+LL + +G+ KIAD G + + +R ++ GT YL PE
Sbjct: 126 HSKRVIHRDIKPENLLLGS--AGEL--KIADFGWSCHAPSSRRT----TLSGTLDYLPPE 177
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGD-EHSLPEIPSRVS 247
+ M + D+W+LG + E L G+ + E + + + I E + P+ V+
Sbjct: 178 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQETYKRISRVEFTFPDF---VT 231
Query: 248 KEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
+ ARD + R P+ R +L+ P++
Sbjct: 232 EGARDLISRLLKHNPSQRPMLREVLEHPWI 261
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 95/195 (48%), Gaps = 17/195 (8%)
Query: 87 LLLEYAAGGTLGDLI-EKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILL 145
+++EY AGG+L D++ E C + E + R L+ + +H + +H ++K DNILL
Sbjct: 95 VVMEYLAGGSLTDVVTETC----MDEGQIAAVCRECLQALEFLHSNQVIHRNIKSDNILL 150
Query: 146 VATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALG 205
S K+ D G ++ Q +M GTP ++APE V + DIW+LG
Sbjct: 151 GMDGS----VKLTDFGFC--AQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLG 204
Query: 206 CVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEI--PSRVSKEARDFLRRCFVRKPA 263
+ +EM+ G ++ + L + G PE+ P ++S RDFL RC
Sbjct: 205 IMAIEMIEGEPPYLNENPLRALYLIATNGT----PELQNPEKLSAIFRDFLNRCLEMDVE 260
Query: 264 FRFTAEMLLDDPFVK 278
R +A+ L+ F+K
Sbjct: 261 KRGSAKELIQHQFLK 275
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 126/273 (46%), Gaps = 17/273 (6%)
Query: 13 VIGQGSFGCVFIAKPK-SNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLECF 71
++G+GSFG V K + + + ++ + +E E+ L+ P +++ F
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH-PNIMKLF 87
Query: 72 GEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDS 131
EI + ++ ++ E GG L D I K E D + + GI ++H
Sbjct: 88 --EILEDSS---SFYIVGELYTGGELFDEIIK--RKRFSEHDAARIIKQVFSGITYMHKH 140
Query: 132 GYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMR-GTPLYLAPETV 190
VH D+KP+NILL + + + KI D G++ C +Q R GT Y+APE V
Sbjct: 141 NIVHRDLKPENILLESKEKDCDI-KIIDFGLST----CFQQNTKMKDRIGTAYYIAPE-V 194
Query: 191 VQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEA 250
++ + D+W+ G ++ +LSG + K + I + LP+ + +S +A
Sbjct: 195 LRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRT-ISDDA 253
Query: 251 RDFLRRCFVRKPAFRFTAEMLLDDPFVKGVDEE 283
+D +R+ P+ R TA L+ P+++ E
Sbjct: 254 KDLIRKMLTFHPSLRITATQCLEHPWIQKYSSE 286
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 126/273 (46%), Gaps = 17/273 (6%)
Query: 13 VIGQGSFGCVFIAKPK-SNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLECF 71
++G+GSFG V K + + + ++ + +E E+ L+ P +++ F
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH-PNIMKLF 87
Query: 72 GEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDS 131
EI + ++ ++ E GG L D I K E D + + GI ++H
Sbjct: 88 --EILEDSS---SFYIVGELYTGGELFDEIIK--RKRFSEHDAARIIKQVFSGITYMHKH 140
Query: 132 GYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMR-GTPLYLAPETV 190
VH D+KP+NILL + + + KI D G++ C +Q R GT Y+APE V
Sbjct: 141 NIVHRDLKPENILLESKEKDCDI-KIIDFGLST----CFQQNTKMKDRIGTAYYIAPE-V 194
Query: 191 VQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEA 250
++ + D+W+ G ++ +LSG + K + I + LP+ + +S +A
Sbjct: 195 LRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRT-ISDDA 253
Query: 251 RDFLRRCFVRKPAFRFTAEMLLDDPFVKGVDEE 283
+D +R+ P+ R TA L+ P+++ E
Sbjct: 254 KDLIRKMLTFHPSLRITATQCLEHPWIQKYSSE 286
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 8/194 (4%)
Query: 85 YNLLLEYAAGGTL-GDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNI 143
+ L+ + GG L D++ + E D H + ILE + H H G VH D+KP+N+
Sbjct: 78 HYLVFDLVTGGELFEDIVAR---EYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENL 134
Query: 144 LLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWA 203
LL + G V K+AD G+A + ++ F GTP YL+PE + + P DIWA
Sbjct: 135 LLASKCKGAAV-KLADFGLAIEVQGDQQAWF--GFAGTPGYLSPEVLRKEAYGKPVDIWA 191
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPA 263
G ++ +L G + ++ + Q + PE + V+ EA++ + + PA
Sbjct: 192 CGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDT-VTPEAKNLINQMLTINPA 250
Query: 264 FRFTAEMLLDDPFV 277
R TA L P+V
Sbjct: 251 KRITAHEALKHPWV 264
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 23/211 (10%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGL--------------PEKDVRHFTRCILEGIGHIHDSG 132
LL Y++ G L + E +G L E H+ R ILE + + HD+
Sbjct: 91 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN 150
Query: 133 YVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQ 192
+H DVKP+N+LL + ++ V K+ D GVA + + GTP ++APE V +
Sbjct: 151 IIHRDVKPENVLLASKENSAPV-KLGDFGVAIQL--GESGLVAGGRVGTPHFMAPEVVKR 207
Query: 193 HMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFS-IIGDEHSL-PEIPSRVSKEA 250
P D+W G ++ +LSG + + ++LF II ++ + P S +S+ A
Sbjct: 208 EPYGKPVDVWGCGVILFILLSGCLPFY----GTKERLFEGIIKGKYKMNPRQWSHISESA 263
Query: 251 RDFLRRCFVRKPAFRFTAEMLLDDPFVKGVD 281
+D +RR + PA R T L+ P++K D
Sbjct: 264 KDLVRRMLMLDPAERITVYEALNHPWLKERD 294
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 125/270 (46%), Gaps = 25/270 (9%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSSFL--PPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
GR +G+G FG V++A+ K + L L L++E E+ +L P +L
Sbjct: 39 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNIL 97
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
+G + Y L+LEYA GT+ ++K + E+ + + + +
Sbjct: 98 RLYG----YFHDATRVY-LILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYC 150
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
H +H D+KP+N+LL + +G+ KIAD G + + +R ++ GT YL PE
Sbjct: 151 HSKRVIHRDIKPENLLLGS--AGEL--KIADFGWSVHAPSSRRT----TLCGTLDYLPPE 202
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGD-EHSLPEIPSRVS 247
+ M + D+W+LG + E L G+ + E + + + I E + P+ V+
Sbjct: 203 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQETYKRISRVEFTFPDF---VT 256
Query: 248 KEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
+ ARD + R P+ R +L+ P++
Sbjct: 257 EGARDLISRLLKHNPSQRPMLREVLEHPWI 286
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 125/270 (46%), Gaps = 25/270 (9%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSSFL--PPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
GR +G+G FG V++A+ K + L L L++E E+ +L P +L
Sbjct: 30 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNIL 88
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
+G + Y L+LEYA GT+ ++K + E+ + + + +
Sbjct: 89 RLYG----YFHDATRVY-LILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYC 141
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
H +H D+KP+N+LL + +G+ KIAD G + + +R ++ GT YL PE
Sbjct: 142 HSKRVIHRDIKPENLLLGS--AGEL--KIADFGWSVHAPSSRRT----TLCGTLDYLPPE 193
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGD-EHSLPEIPSRVS 247
+ M + D+W+LG + E L G+ + E + + + I E + P+ V+
Sbjct: 194 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQETYKRISRVEFTFPDF---VT 247
Query: 248 KEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
+ ARD + R P+ R +L+ P++
Sbjct: 248 EGARDLISRLLKHNPSQRPMLREVLEHPWI 277
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 125/270 (46%), Gaps = 25/270 (9%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSSFL--PPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
GR +G+G FG V++A+ K + L L L++E E+ +L P +L
Sbjct: 14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNIL 72
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
+G + Y L+LEYA GT+ ++K + E+ + + + +
Sbjct: 73 RLYG----YFHDATRVY-LILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYC 125
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
H +H D+KP+N+LL + +G+ KIAD G + + +R ++ GT YL PE
Sbjct: 126 HSKRVIHRDIKPENLLLGS--AGEL--KIADFGWSVHAPSSRRD----TLCGTLDYLPPE 177
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGD-EHSLPEIPSRVS 247
+ M + D+W+LG + E L G+ + E + + + I E + P+ V+
Sbjct: 178 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQETYKRISRVEFTFPDF---VT 231
Query: 248 KEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
+ ARD + R P+ R +L+ P++
Sbjct: 232 EGARDLISRLLKHNPSQRPMLREVLEHPWI 261
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 125/270 (46%), Gaps = 25/270 (9%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSSFL--PPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
GR +G+G FG V++A+ K + L L L++E E+ +L P +L
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNIL 76
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
+G + Y L+LEYA GT+ ++K + E+ + + + +
Sbjct: 77 RLYG----YFHDATRVY-LILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYC 129
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
H +H D+KP+N+LL + +G+ KIAD G + + +R ++ GT YL PE
Sbjct: 130 HSKRVIHRDIKPENLLLGS--AGEL--KIADFGWSVHAPSSRRT----TLCGTLDYLPPE 181
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGD-EHSLPEIPSRVS 247
+ M + D+W+LG + E L G+ + E + + + I E + P+ V+
Sbjct: 182 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQETYKRISRVEFTFPDF---VT 235
Query: 248 KEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
+ ARD + R P+ R +L+ P++
Sbjct: 236 EGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 125/270 (46%), Gaps = 25/270 (9%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSSFL--PPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
GR +G+G FG V++A+ K + L L L++E E+ +L P +L
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNIL 71
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
+G + Y L+LEYA GT+ ++K + E+ + + + +
Sbjct: 72 RLYG----YFHDATRVY-LILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYC 124
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
H +H D+KP+N+LL + +G+ KIAD G + + +R ++ GT YL PE
Sbjct: 125 HSKRVIHRDIKPENLLLGS--AGEL--KIADFGWSVHAPSSRRT----TLCGTLDYLPPE 176
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGD-EHSLPEIPSRVS 247
+ M + D+W+LG + E L G+ + E + + + I E + P+ V+
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQETYKRISRVEFTFPDF---VT 230
Query: 248 KEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
+ ARD + R P+ R +L+ P++
Sbjct: 231 EGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 125/270 (46%), Gaps = 25/270 (9%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSSFL--PPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
GR +G+G FG V++A+ K + L L L++E E+ +L P +L
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNIL 74
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
+G + Y L+LEYA GT+ ++K + E+ + + + +
Sbjct: 75 RLYG----YFHDATRVY-LILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYC 127
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
H +H D+KP+N+LL + +G+ KIAD G + + +R ++ GT YL PE
Sbjct: 128 HSKRVIHRDIKPENLLLGS--AGEL--KIADFGWSVHAPSSRRT----TLCGTLDYLPPE 179
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGD-EHSLPEIPSRVS 247
+ M + D+W+LG + E L G+ + E + + + I E + P+ V+
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQETYKRISRVEFTFPDF---VT 233
Query: 248 KEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
+ ARD + R P+ R +L+ P++
Sbjct: 234 EGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 130/272 (47%), Gaps = 22/272 (8%)
Query: 14 IGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLECFGE 73
+G G+ G VF K + + + + +E +V N P+++ +G
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN-SPYIVGFYGA 75
Query: 74 EITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGY 133
+ GE ++ +E+ GG+L +++K +PE+ + + +++G+ ++ +
Sbjct: 76 FYSDGE-----ISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREKHK 128
Query: 134 V-HCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQ 192
+ H DVKP NIL+ + + K+ D GV+ + +F GT Y++PE +
Sbjct: 129 IMHRDVKPSNILV----NSRGEIKLCDFGVSGQLIDEMANEF----VGTRSYMSPERLQG 180
Query: 193 HMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRV-SKEAR 251
SDIW++G ++EM GR + +I +L I +E P++PS V S E +
Sbjct: 181 THYSVQSDIWSMGLSLVEMAVGRYP---RPPMAIFELLDYIVNEPP-PKLPSAVFSLEFQ 236
Query: 252 DFLRRCFVRKPAFRFTAEMLLDDPFVKGVDEE 283
DF+ +C ++ PA R + L+ F+K D E
Sbjct: 237 DFVNKCLIKNPAERADLKQLMVHAFIKRSDAE 268
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 124/270 (45%), Gaps = 25/270 (9%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSSFL--PPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
GR +G+G FG V++A+ K + L L L++E E+ +L P +L
Sbjct: 39 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNIL 97
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
+G + Y L+LEYA GT+ ++K + E+ + + + +
Sbjct: 98 RLYG----YFHDATRVY-LILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYC 150
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
H +H D+KP+N+LL + +G+ KIAD G + + +R + GT YL PE
Sbjct: 151 HSKRVIHRDIKPENLLLGS--AGEL--KIADFGWSVHAPSSRRD----DLCGTLDYLPPE 202
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGD-EHSLPEIPSRVS 247
+ M + D+W+LG + E L G+ + E + + + I E + P+ V+
Sbjct: 203 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQETYKRISRVEFTFPDF---VT 256
Query: 248 KEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
+ ARD + R P+ R +L+ P++
Sbjct: 257 EGARDLISRLLKHNPSQRPMLREVLEHPWI 286
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 125/270 (46%), Gaps = 25/270 (9%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSSFL--PPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
GR +G+G FG V++A+ K + L L L++E E+ +L P +L
Sbjct: 17 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNIL 75
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
+G + Y L+LEYA GT+ ++K + E+ + + + +
Sbjct: 76 RLYG----YFHDATRVY-LILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYC 128
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
H +H D+KP+N+LL + +G+ KIAD G + + +R ++ GT YL PE
Sbjct: 129 HSKRVIHRDIKPENLLLGS--AGEL--KIADFGWSVHAPSSRRT----TLCGTLDYLPPE 180
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGD-EHSLPEIPSRVS 247
+ M + D+W+LG + E L G+ + E + + + I E + P+ V+
Sbjct: 181 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQETYKRISRVEFTFPDF---VT 234
Query: 248 KEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
+ ARD + R P+ R +L+ P++
Sbjct: 235 EGARDLISRLLKHNPSQRPMLREVLEHPWI 264
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 125/270 (46%), Gaps = 25/270 (9%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSSFL--PPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
GR +G+G FG V++A+ K + L L L++E E+ +L P +L
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNIL 74
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
+G + Y L+LEYA GT+ ++K + E+ + + + +
Sbjct: 75 RLYG----YFHDATRVY-LILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYC 127
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
H +H D+KP+N+LL + +G+ KIAD G + + +R ++ GT YL PE
Sbjct: 128 HSKRVIHRDIKPENLLLGS--AGEL--KIADFGWSVHAPSSRRT----TLCGTLDYLPPE 179
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGD-EHSLPEIPSRVS 247
+ M + D+W+LG + E L G+ + E + + + I E + P+ V+
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQETYKRISRVEFTFPDF---VT 233
Query: 248 KEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
+ ARD + R P+ R +L+ P++
Sbjct: 234 EGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 125/270 (46%), Gaps = 25/270 (9%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSSFL--PPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
GR +G+G FG V++A+ K + L L L++E E+ +L P +L
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNIL 71
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
+G + Y L+LEYA GT+ ++K + E+ + + + +
Sbjct: 72 RLYG----YFHDATRVY-LILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYC 124
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
H +H D+KP+N+LL + +G+ KIAD G + + +R + + GT YL PE
Sbjct: 125 HSKRVIHRDIKPENLLLGS--AGEL--KIADFGWSVHAPSSRRTE----LCGTLDYLPPE 176
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGD-EHSLPEIPSRVS 247
+ M + D+W+LG + E L G+ + E + + + I E + P+ V+
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQETYKRISRVEFTFPDF---VT 230
Query: 248 KEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
+ ARD + R P+ R +L+ P++
Sbjct: 231 EGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 117/270 (43%), Gaps = 21/270 (7%)
Query: 13 VIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV-LECF 71
V+G G+F VF+ K + L L+ E V + V LE
Sbjct: 16 VLGSGAFSEVFLVKQRLTGKLFA-LKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDI 74
Query: 72 GEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDS 131
E T Y L+++ +GG L D I EKD + +L + ++H++
Sbjct: 75 YESTT-------HYYLVMQLVSGGELFDRI--LERGVYTEKDASLVIQQVLSAVKYLHEN 125
Query: 132 GYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVV 191
G VH D+KP+N+L + + + I D G++K ++ + GTP Y+APE +
Sbjct: 126 GIVHRDLKPENLLYLTPEENSKIM-ITDFGLSK----MEQNGIMSTACGTPGYVAPEVLA 180
Query: 192 QHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIP--SRVSKE 249
Q D W++G + +L G + + + +LF I + + E P +S+
Sbjct: 181 QKPYSKAVDCWSIGVITYILLCGYPPFYEETE---SKLFEKIKEGYYEFESPFWDDISES 237
Query: 250 ARDFLRRCFVRKPAFRFTAEMLLDDPFVKG 279
A+DF+ + P R+T E L P++ G
Sbjct: 238 AKDFICHLLEKDPNERYTCEKALSHPWIDG 267
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 123/270 (45%), Gaps = 25/270 (9%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSSFL--PPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
GR +G+G FG V++A+ K + L L L++E E+ +L P +L
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNIL 76
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
+G + Y L+LEYA G + ++K + E+ + + + +
Sbjct: 77 RLYG----YFHDATRVY-LILEYAPRGEVYKELQKLSK--FDEQRTATYITELANALSYC 129
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
H +H D+KP+N+LL + +G+ KIAD G + + +R + GT YL PE
Sbjct: 130 HSKRVIHRDIKPENLLLGS--AGEL--KIADFGWSVHAPSSRRX----XLXGTLDYLPPE 181
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGD-EHSLPEIPSRVS 247
+ M + D+W+LG + E L G+ + E + + + I E + P+ V+
Sbjct: 182 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQETYKRISRVEFTFPDF---VT 235
Query: 248 KEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
+ ARD + R P+ R +L+ P++
Sbjct: 236 EGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 125/270 (46%), Gaps = 25/270 (9%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSSFLP--PLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
GR +G+G FG V++A+ K + L L L++E E+ +L P +L
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNIL 74
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
+G + Y L+LEYA GT+ ++K + E+ + + + +
Sbjct: 75 RLYG----YFHDATRVY-LILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYC 127
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
H +H D+KP+N+LL + +G+ KIAD G + + +R ++ GT YL PE
Sbjct: 128 HSKRVIHRDIKPENLLLGS--AGEL--KIADFGWSVHAPSSRR----AALCGTLDYLPPE 179
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGD-EHSLPEIPSRVS 247
+ M + D+W+LG + E L G+ + E + + + I E + P+ V+
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQETYKRISRVEFTFPDF---VT 233
Query: 248 KEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
+ ARD + R P+ R +L+ P++
Sbjct: 234 EGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 125/270 (46%), Gaps = 25/270 (9%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSSFL--PPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
GR +G+G FG V++A+ K + L L L++E E+ +L P +L
Sbjct: 12 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNIL 70
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
+G + Y L+LEYA GT+ ++K + E+ + + + +
Sbjct: 71 RLYG----YFHDATRVY-LILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYC 123
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
H +H D+KP+N+LL + +G+ KIAD G + + +R ++ GT YL PE
Sbjct: 124 HSKRVIHRDIKPENLLLGS--AGEL--KIADFGWSVHAPSSRRT----TLCGTLDYLPPE 175
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGD-EHSLPEIPSRVS 247
+ M + D+W+LG + E L G+ + E + + + I E + P+ V+
Sbjct: 176 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQETYKRISRVEFTFPDF---VT 229
Query: 248 KEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
+ ARD + R P+ R +L+ P++
Sbjct: 230 EGARDLISRLLKHNPSQRPMLREVLEHPWI 259
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 124/270 (45%), Gaps = 25/270 (9%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSSFL--PPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
GR +G+G FG V++A+ K + L L L++E E+ +L P +L
Sbjct: 14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNIL 72
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
+G + Y L+LEYA GT+ ++K + E+ + + + +
Sbjct: 73 RLYG----YFHDATRVY-LILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYC 125
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
H +H D+KP+N+LL + +G+ KIAD G + + +R + GT YL PE
Sbjct: 126 HSKRVIHRDIKPENLLLGS--AGEL--KIADFGWSVHAPSSRRT----DLCGTLDYLPPE 177
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGD-EHSLPEIPSRVS 247
+ M + D+W+LG + E L G+ + E + + + I E + P+ V+
Sbjct: 178 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQETYKRISRVEFTFPDF---VT 231
Query: 248 KEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
+ ARD + R P+ R +L+ P++
Sbjct: 232 EGARDLISRLLKHNPSQRPMLREVLEHPWI 261
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 124/270 (45%), Gaps = 25/270 (9%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSSFL--PPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
GR +G+G FG V++A+ K + L L L++E E+ +L P +L
Sbjct: 15 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNIL 73
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
+G + Y L+LEYA GT+ ++K + E+ + + + +
Sbjct: 74 RLYG----YFHDATRVY-LILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYC 126
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
H +H D+KP+N+LL + +G+ KIAD G + + +R + GT YL PE
Sbjct: 127 HSKRVIHRDIKPENLLLGS--AGEL--KIADFGWSVHAPSSRRX----XLCGTLDYLPPE 178
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGD-EHSLPEIPSRVS 247
+ M + D+W+LG + E L G+ + E + + + I E + P+ V+
Sbjct: 179 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQETYKRISRVEFTFPDF---VT 232
Query: 248 KEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
+ ARD + R P+ R +L+ P++
Sbjct: 233 EGARDLISRLLKHNPSQRPMLREVLEHPWI 262
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 124/270 (45%), Gaps = 25/270 (9%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSSFL--PPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
GR +G+G FG V++A+ K + L L L++E E+ +L P +L
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNIL 71
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
+G + Y L+LEYA GT+ ++K + E+ + + + +
Sbjct: 72 RLYG----YFHDATRVY-LILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYC 124
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
H +H D+KP+N+LL +G+ KIAD G + + +R ++ GT YL PE
Sbjct: 125 HSKRVIHRDIKPENLLL--GSAGEL--KIADFGWSVHAPSSRRA----ALCGTLDYLPPE 176
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGD-EHSLPEIPSRVS 247
+ M + D+W+LG + E L G+ + E + + + I E + P+ V+
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQETYKRISRVEFTFPDF---VT 230
Query: 248 KEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
+ ARD + R P+ R +L+ P++
Sbjct: 231 EGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 124/270 (45%), Gaps = 25/270 (9%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSSFL--PPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
GR +G+G FG V++A+ K + L L L++E E+ +L P +L
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNIL 76
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
+G + Y L+LEYA GT+ ++K + E+ + + + +
Sbjct: 77 RLYG----YFHDATRVY-LILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYC 129
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
H +H D+KP+N+LL + +G+ KIAD G + + +R + GT YL PE
Sbjct: 130 HSKRVIHRDIKPENLLLGS--AGEL--KIADFGWSVHAPSSRRT----DLCGTLDYLPPE 181
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGD-EHSLPEIPSRVS 247
+ M + D+W+LG + E L G+ + E + + + I E + P+ V+
Sbjct: 182 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQETYKRISRVEFTFPDF---VT 235
Query: 248 KEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
+ ARD + R P+ R +L+ P++
Sbjct: 236 EGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 124/270 (45%), Gaps = 25/270 (9%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSSFLP--PLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
GR +G+G FG V++A+ K L L L++E E+ +L P +L
Sbjct: 10 GRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNIL 68
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
+G + Y L+LEYA GT+ ++K + E+ + + + +
Sbjct: 69 RLYG----YFHDATRVY-LILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYC 121
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
H +H D+KP+N+LL + +G+ KIAD G + + +R ++ GT YL PE
Sbjct: 122 HSKRVIHRDIKPENLLLGS--AGEL--KIADFGWSVHAPSSRRT----TLCGTLDYLPPE 173
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGD-EHSLPEIPSRVS 247
+ M + D+W+LG + E L G+ + E + + + I E + P+ V+
Sbjct: 174 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQETYKRISRVEFTFPDF---VT 227
Query: 248 KEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
+ ARD + R P+ R +L+ P++
Sbjct: 228 EGARDLISRLLKHNPSQRPMLREVLEHPWI 257
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 124/270 (45%), Gaps = 25/270 (9%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSSFL--PPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
GR +G+G FG V++A+ K + L L L++E E+ +L P +L
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNIL 71
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
+G + Y L+LEYA GT+ ++K + E+ + + + +
Sbjct: 72 RLYG----YFHDATRVY-LILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYC 124
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
H +H D+KP+N+LL + +G+ KIAD G + + +R + GT YL PE
Sbjct: 125 HSKRVIHRDIKPENLLLGS--AGEL--KIADFGWSVHAPSSRRT----DLCGTLDYLPPE 176
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGD-EHSLPEIPSRVS 247
+ M + D+W+LG + E L G+ + E + + + I E + P+ V+
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQETYKRISRVEFTFPDF---VT 230
Query: 248 KEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
+ ARD + R P+ R +L+ P++
Sbjct: 231 EGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 94/197 (47%), Gaps = 8/197 (4%)
Query: 82 EMAYNLLLEYAAGGTL-GDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKP 140
E + L+ + GG L D++ + E D H + ILE + H H G VH D+KP
Sbjct: 93 EGHHYLIFDLVTGGELFEDIVAR---EYYSEADASHCIQQILEAVLHCHQMGVVHRDLKP 149
Query: 141 DNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSD 200
+N+LL + G V K+AD G+A ++ F GTP YL+PE + + P D
Sbjct: 150 ENLLLASKLKGAAV-KLADFGLAIEVEGEQQAWF--GFAGTPGYLSPEVLRKDPYGKPVD 206
Query: 201 IWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVR 260
+WA G ++ +L G + ++ + Q + PE + V+ EA+D + +
Sbjct: 207 LWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDT-VTPEAKDLINKMLTI 265
Query: 261 KPAFRFTAEMLLDDPFV 277
P+ R TA L P++
Sbjct: 266 NPSKRITAAEALKHPWI 282
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 125/272 (45%), Gaps = 25/272 (9%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSSFLP--PLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
GR +G+G FG V++A+ + + L L L++E E+ +L P +L
Sbjct: 17 GRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH-PNIL 75
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
+G + Y L+LEYA GT+ ++K + E+ + + + +
Sbjct: 76 RLYG----YFHDATRVY-LILEYAPLGTVYRELQKLSR--FDEQRTATYITELANALSYC 128
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
H +H D+KP+N+LL + +G+ KIAD G + + +R ++ GT YL PE
Sbjct: 129 HSKRVIHRDIKPENLLLGS--NGEL--KIADFGWSVHAPSSRRT----TLCGTLDYLPPE 180
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGD-EHSLPEIPSRVS 247
+ M + D+W+LG + E L G + E + + + I E + P+ V+
Sbjct: 181 MIEGRMHDEKVDLWSLGVLCYEFLVGMPPF---EAHTYQETYRRISRVEFTFPDF---VT 234
Query: 248 KEARDFLRRCFVRKPAFRFTAEMLLDDPFVKG 279
+ ARD + R + R T +L+ P++K
Sbjct: 235 EGARDLISRLLKHNASQRLTLAEVLEHPWIKA 266
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 124/270 (45%), Gaps = 25/270 (9%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSSFL--PPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
GR +G+G FG V++A+ K + L L L++E E+ +L P +L
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNIL 71
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
+G + Y L+LEYA GT+ ++K + E+ + + + +
Sbjct: 72 RLYG----YFHDATRVY-LILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYC 124
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
H +H D+KP+N+LL + +G+ KIAD G + + +R + GT YL PE
Sbjct: 125 HSKRVIHRDIKPENLLLGS--AGEL--KIADFGWSVHAPSSRRT----DLCGTLDYLPPE 176
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGD-EHSLPEIPSRVS 247
+ M + D+W+LG + E L G+ + E + + + I E + P+ V+
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQETYKRISRVEFTFPDF---VT 230
Query: 248 KEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
+ ARD + R P+ R +L+ P++
Sbjct: 231 EGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 125/272 (45%), Gaps = 25/272 (9%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSSFLP--PLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
GR +G+G FG V++A+ + + L L L++E E+ +L P +L
Sbjct: 17 GRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH-PNIL 75
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
+G + Y L+LEYA GT+ ++K + E+ + + + +
Sbjct: 76 RLYG----YFHDATRVY-LILEYAPLGTVYRELQKLSR--FDEQRTATYITELANALSYC 128
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
H +H D+KP+N+LL + +G+ KIAD G + + +R ++ GT YL PE
Sbjct: 129 HSKRVIHRDIKPENLLLGS--NGEL--KIADFGWSVHAPSSRRD----TLCGTLDYLPPE 180
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGD-EHSLPEIPSRVS 247
+ M + D+W+LG + E L G + E + + + I E + P+ V+
Sbjct: 181 MIEGRMHDEKVDLWSLGVLCYEFLVGMPPF---EAHTYQETYRRISRVEFTFPDF---VT 234
Query: 248 KEARDFLRRCFVRKPAFRFTAEMLLDDPFVKG 279
+ ARD + R + R T +L+ P++K
Sbjct: 235 EGARDLISRLLKHNASQRLTLAEVLEHPWIKA 266
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 124/270 (45%), Gaps = 25/270 (9%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSSFL--PPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
GR +G+G FG V++A+ K + L L L++E E+ +L P +L
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNIL 71
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
+G + Y L+LEYA GT+ ++K + E+ + + + +
Sbjct: 72 RLYG----YFHDATRVY-LILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYC 124
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
H +H D+KP+N+LL + +G+ KIAD G + + +R + GT YL PE
Sbjct: 125 HSKRVIHRDIKPENLLLGS--AGEL--KIADFGWSVHAPSSRRX----XLCGTLDYLPPE 176
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGD-EHSLPEIPSRVS 247
+ M + D+W+LG + E L G+ + E + + + I E + P+ V+
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQETYKRISRVEFTFPDF---VT 230
Query: 248 KEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
+ ARD + R P+ R +L+ P++
Sbjct: 231 EGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 124/270 (45%), Gaps = 25/270 (9%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSSFL--PPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
GR +G+G FG V++A+ K + L L L++E E+ +L P +L
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNIL 76
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
+G + Y L+LEYA G + ++K + E+ + + + +
Sbjct: 77 RLYG----YFHDATRVY-LILEYAPRGEVYKELQKLSK--FDEQRTATYITELANALSYC 129
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
H +H D+KP+N+LL + +G+ KIAD G + + +R ++ GT YL PE
Sbjct: 130 HSKRVIHRDIKPENLLLGS--AGEL--KIADFGWSVHAPSSRRT----TLCGTLDYLPPE 181
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGD-EHSLPEIPSRVS 247
+ M + D+W+LG + E L G+ + E + + + I E + P+ V+
Sbjct: 182 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQETYKRISRVEFTFPDF---VT 235
Query: 248 KEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
+ ARD + R P+ R +L+ P++
Sbjct: 236 EGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 129/291 (44%), Gaps = 34/291 (11%)
Query: 8 WFRGRVIGQGSFG-CVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPF 66
+ R + IG+GSFG + + + ++ + ++E V N+ P
Sbjct: 26 YVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKH-PN 84
Query: 67 VLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIG 126
+++ + E + ENG + ++++Y GG L I G E + + I +
Sbjct: 85 IVQ-YRE--SFEENGSLY--IVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALK 139
Query: 127 HIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAK-------RSRHCKRQKFDPSMR 179
H+HD +H D+K NI L T+ G ++ D G+A+ +R C
Sbjct: 140 HVHDRKILHRDIKSQNIFL--TKDG--TVQLGDFGIARVLNSTVELARACI--------- 186
Query: 180 GTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQL-FSIIGDEHS 238
GTP YL+PE SDIWALGCV+ E+ + + A+ E S+ L II S
Sbjct: 187 GTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAF---EAGSMKNLVLKIISG--S 241
Query: 239 LPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFV-KGVDEELSREL 288
P + S + R + + F R P R + +L+ F+ K +++ LS +L
Sbjct: 242 FPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKRIEKFLSPQL 292
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 124/270 (45%), Gaps = 25/270 (9%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSSFL--PPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
GR +G+G FG V++A+ K + L L L++E E+ +L P +L
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNIL 71
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
+G + Y L+LEYA GT+ ++K + E+ + + + +
Sbjct: 72 RLYG----YFHDATRVY-LILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYC 124
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
H +H D+KP+N+LL + +G+ KIAD G + + +R + GT YL PE
Sbjct: 125 HSKRVIHRDIKPENLLLGS--AGEL--KIADFGWSVHAPSSRRT----XLCGTLDYLPPE 176
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGD-EHSLPEIPSRVS 247
+ M + D+W+LG + E L G+ + E + + + I E + P+ V+
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQETYKRISRVEFTFPDF---VT 230
Query: 248 KEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
+ ARD + R P+ R +L+ P++
Sbjct: 231 EGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 124/270 (45%), Gaps = 25/270 (9%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSSFL--PPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
GR +G+G FG V++A+ K + L L L++E E+ +L P +L
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNIL 74
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
+G + Y L+LEYA GT+ ++K + E+ + + + +
Sbjct: 75 RLYG----YFHDATRVY-LILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYC 127
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
H +H D+KP+N+LL + +G+ KIAD G + + +R + GT YL PE
Sbjct: 128 HSKRVIHRDIKPENLLLGS--AGEL--KIADFGWSVHAPSSRRD----DLCGTLDYLPPE 179
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGD-EHSLPEIPSRVS 247
+ M + D+W+LG + E L G+ + E + + + I E + P+ V+
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQETYKRISRVEFTFPDF---VT 233
Query: 248 KEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
+ ARD + R P+ R +L+ P++
Sbjct: 234 EGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 131/279 (46%), Gaps = 26/279 (9%)
Query: 14 IGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLECFGE 73
+G G+ G VF K + + + + +E +V N P+++ +G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN-SPYIVGFYGA 72
Query: 74 EITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGY 133
+ GE ++ +E+ GG+L +++K +PE+ + + +++G+ ++ +
Sbjct: 73 FYSDGE-----ISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREKHK 125
Query: 134 V-HCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQ 192
+ H DVKP NIL+ + + K+ D GV+ + F GT Y++PE +
Sbjct: 126 IMHRDVKPSNILV----NSRGEIKLCDFGVSGQLIDSMANSF----VGTRSYMSPERLQG 177
Query: 193 HMQEAPSDIWALGCVVLEMLSGRQAWV---VKEDC----SIDQLFSIIGDEHSLPEIPSR 245
SDIW++G ++EM GR KED +I +L I +E P++PS
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPP-PKLPSG 236
Query: 246 V-SKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGVDEE 283
V S E +DF+ +C ++ PA R + L+ F+K D E
Sbjct: 237 VFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAE 275
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 97/198 (48%), Gaps = 14/198 (7%)
Query: 86 NLLLEYAAGGTLGD-LIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNIL 144
+L+LE GG L D ++EK E+D + ILE + ++H++G VH D+KP+N L
Sbjct: 124 SLVLELVTGGELFDRIVEK---GYYSERDAADAVKQILEAVAYLHENGIVHRDLKPEN-L 179
Query: 145 LVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWAL 204
L AT + KIAD G++K H Q ++ GTP Y APE + D+W++
Sbjct: 180 LYATPAPDAPLKIADFGLSKIVEH---QVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSV 236
Query: 205 GCVVLEMLSGRQAWVVKEDCSIDQLF--SIIGDEHS-LPEIPSRVSKEARDFLRRCFVRK 261
G + +L G + + D DQ I+ E+ + VS A+D +R+ V
Sbjct: 237 GIITYILLCGFEPFY---DERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLD 293
Query: 262 PAFRFTAEMLLDDPFVKG 279
P R T L P+V G
Sbjct: 294 PKKRLTTFQALQHPWVTG 311
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 132/299 (44%), Gaps = 39/299 (13%)
Query: 12 RVIGQGSFGCVFIAKPKSNSSF--LPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLE 69
+VIG+G+FG V + K K+ + L ++E++V N C ++
Sbjct: 96 KVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVN-GDCQWI-- 152
Query: 70 CFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIH 129
+ E L+++Y GG L L+ K + LPE R + ++ I IH
Sbjct: 153 ---TALHYAFQDENHLYLVMDYYVGGDLLTLLSKFE-DKLPEDMARFYIGEMVLAIDSIH 208
Query: 130 DSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMR-----GTPLY 184
YVH D+KPDN+LL ++AD G C + D +++ GTP Y
Sbjct: 209 QLHYVHRDIKPDNVLLDVNGH----IRLADFG------SCLKMNDDGTVQSSVAVGTPDY 258
Query: 185 LAPETVVQHMQEAPS------DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHS 238
++PE ++Q M++ D W+LG + EML G + + S+ + + I +
Sbjct: 259 ISPE-ILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAE---SLVETYGKIMNHEE 314
Query: 239 LPEIPSR---VSKEARDFLRR--CFVRKPAFRFTAEMLLDDPFVKGVDEELSRELEGDY 292
+ PS VS+EA+D ++R C + + E F +G++ E R LE Y
Sbjct: 315 RFQFPSHVTDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGLNWENIRNLEAPY 373
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 125/270 (46%), Gaps = 25/270 (9%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSSFL--PPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
GR +G+G FG V++A+ K + L L L++E E+ +L P +L
Sbjct: 15 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNIL 73
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
+G + Y L+LEYA GT+ ++K + E+ + + + +
Sbjct: 74 RLYG----YFHDATRVY-LILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYC 126
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
H +H D+KP+N+LL + +G+ KIA+ G + + +R ++ GT YL PE
Sbjct: 127 HSKRVIHRDIKPENLLLGS--AGEL--KIANFGWSVHAPSSRRT----TLCGTLDYLPPE 178
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGD-EHSLPEIPSRVS 247
+ M + D+W+LG + E L G+ + E + + + I E + P+ V+
Sbjct: 179 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQETYKRISRVEFTFPDF---VT 232
Query: 248 KEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
+ ARD + R P+ R +L+ P++
Sbjct: 233 EGARDLISRLLKHNPSQRPMLREVLEHPWI 262
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 124/270 (45%), Gaps = 25/270 (9%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSSFL--PPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
GR +G+G FG V++A+ K + L L L++E E+ +L P +L
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNIL 74
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
+G + Y L+LEYA GT+ ++K + E+ + + + +
Sbjct: 75 RLYG----YFHDATRVY-LILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYC 127
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
H +H D+KP+N+LL + +G+ KIAD G + + +R + GT YL PE
Sbjct: 128 HSKRVIHRDIKPENLLLGS--AGEL--KIADFGWSVHAPSSRRX----XLCGTLDYLPPE 179
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGD-EHSLPEIPSRVS 247
+ M + D+W+LG + E L G+ + E + + + I E + P+ V+
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQETYKRISRVEFTFPDF---VT 233
Query: 248 KEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
+ ARD + R P+ R +L+ P++
Sbjct: 234 EGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 125/270 (46%), Gaps = 25/270 (9%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSSFL--PPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
GR +G+G FG V++A+ K + L L L++E E+ +L P +L
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNIL 74
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
+G + Y L+LEYA GT+ ++K + E+ + + + +
Sbjct: 75 RLYG----YFHDATRVY-LILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYC 127
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
H +H D+KP+N+LL + +G+ KIA+ G + + +R ++ GT YL PE
Sbjct: 128 HSKRVIHRDIKPENLLLGS--AGEL--KIANFGWSVHAPSSRRT----TLCGTLDYLPPE 179
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGD-EHSLPEIPSRVS 247
+ M + D+W+LG + E L G+ + E + + + I E + P+ V+
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQETYKRISRVEFTFPDF---VT 233
Query: 248 KEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
+ ARD + R P+ R +L+ P++
Sbjct: 234 EGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 132/299 (44%), Gaps = 39/299 (13%)
Query: 12 RVIGQGSFGCVFIAKPKSNSSF--LPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLE 69
+VIG+G+FG V + K K+ + L ++E++V N C ++
Sbjct: 80 KVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVN-GDCQWI-- 136
Query: 70 CFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIH 129
+ E L+++Y GG L L+ K + LPE R + ++ I IH
Sbjct: 137 ---TALHYAFQDENHLYLVMDYYVGGDLLTLLSKFE-DKLPEDMARFYIGEMVLAIDSIH 192
Query: 130 DSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMR-----GTPLY 184
YVH D+KPDN+LL ++AD G C + D +++ GTP Y
Sbjct: 193 QLHYVHRDIKPDNVLLDVNGH----IRLADFG------SCLKMNDDGTVQSSVAVGTPDY 242
Query: 185 LAPETVVQHMQEAPS------DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHS 238
++PE ++Q M++ D W+LG + EML G + + S+ + + I +
Sbjct: 243 ISPE-ILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAE---SLVETYGKIMNHEE 298
Query: 239 LPEIPSR---VSKEARDFLRR--CFVRKPAFRFTAEMLLDDPFVKGVDEELSRELEGDY 292
+ PS VS+EA+D ++R C + + E F +G++ E R LE Y
Sbjct: 299 RFQFPSHVTDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGLNWENIRNLEAPY 357
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 126/284 (44%), Gaps = 40/284 (14%)
Query: 8 WFRGRVIGQGSFG-C----------VFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKE 56
+ RGR +G+G F C VF K S L P + E
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKP---------HQKEKMSTEIA 94
Query: 57 VFDNLNGCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRH 116
+ +L+ P V+ G E+ + Y ++LE +L +L ++ PE R+
Sbjct: 95 IHKSLDN-PHVVGFHG----FFEDDDFVY-VVLEICRRRSLLELHKRRKAVTEPE--ARY 146
Query: 117 FTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDP 176
F R ++G+ ++H++ +H D+K N+ L + KI D G+A + +K D
Sbjct: 147 FMRQTIQGVQYLHNNRVIHRDLKLGNLFL----NDDMDVKIGDFGLATKIEFDGERKKD- 201
Query: 177 SMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDE 236
+ GTP Y+APE + + DIW+LGC++ +L G+ + + C + I +E
Sbjct: 202 -LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF--ETSCLKETYIRIKKNE 258
Query: 237 HSLPEIPSRVSKEARDFLRRCFVRKPAFRFT-AEMLLDDPFVKG 279
+S +P ++ A +RR P R + AE+L D+ F G
Sbjct: 259 YS---VPRHINPVASALIRRMLHADPTLRPSVAELLTDEFFTSG 299
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 122/289 (42%), Gaps = 28/289 (9%)
Query: 13 VIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLECFG 72
V+G G+F V +A+ K + ++ E V + P ++
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKH-PNIVAL-- 81
Query: 73 EEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSG 132
+ E+G Y L+++ +GG L D I E+D +L+ + ++HD G
Sbjct: 82 --DDIYESGGHLY-LIMQLVSGGELFDRI--VEKGFYTERDASRLIFQVLDAVKYLHDLG 136
Query: 133 YVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDP-----SMRGTPLYLAP 187
VH D+KP+N+L + + I+D G++K DP + GTP Y+AP
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIM-ISDFGLSKME--------DPGSVLSTACGTPGYVAP 187
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIP--SR 245
E + Q D W++G + +L G + + D +LF I + P
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDA---KLFEQILKAEYEFDSPYWDD 244
Query: 246 VSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGVDEELSRELEGDYSQ 294
+S A+DF+R + P RFT E L P++ G D L + + S+
Sbjct: 245 ISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAG-DTALDKNIHQSVSE 292
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 124/289 (42%), Gaps = 28/289 (9%)
Query: 13 VIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLECFG 72
V+G G+F V +A+ K + ++ E V + P ++
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKH-PNIVAL-- 81
Query: 73 EEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSG 132
++I E+G Y L+++ +GG L D I E+D +L+ + ++HD G
Sbjct: 82 DDIY--ESGGHLY-LIMQLVSGGELFDRI--VEKGFYTERDASRLIFQVLDAVKYLHDLG 136
Query: 133 YVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDP-----SMRGTPLYLAP 187
VH D+KP+N+L + + I+D G++K DP + GTP Y+AP
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIM-ISDFGLSKME--------DPGSVLSTACGTPGYVAP 187
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIP--SR 245
E + Q D W++G + +L G + + D +LF I + P
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDA---KLFEQILKAEYEFDSPYWDD 244
Query: 246 VSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGVDEELSRELEGDYSQ 294
+S A+DF+R + P RFT E L P++ G D L + + S+
Sbjct: 245 ISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAG-DTALDKNIHQSVSE 292
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 122/289 (42%), Gaps = 28/289 (9%)
Query: 13 VIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLECFG 72
V+G G+F V +A+ K + ++ E V + P ++
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKH-PNIVAL-- 81
Query: 73 EEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSG 132
+ E+G Y L+++ +GG L D I E+D +L+ + ++HD G
Sbjct: 82 --DDIYESGGHLY-LIMQLVSGGELFDRI--VEKGFYTERDASRLIFQVLDAVKYLHDLG 136
Query: 133 YVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDP-----SMRGTPLYLAP 187
VH D+KP+N+L + + I+D G++K DP + GTP Y+AP
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIM-ISDFGLSKME--------DPGSVLSTACGTPGYVAP 187
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIP--SR 245
E + Q D W++G + +L G + + D +LF I + P
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDA---KLFEQILKAEYEFDSPYWDD 244
Query: 246 VSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGVDEELSRELEGDYSQ 294
+S A+DF+R + P RFT E L P++ G D L + + S+
Sbjct: 245 ISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAG-DTALDKNIHQSVSE 292
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 127/284 (44%), Gaps = 40/284 (14%)
Query: 8 WFRGRVIGQGSFG-C----------VFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKE 56
+ RGR +G+G F C VF K S L P + E
Sbjct: 28 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKP---------HQKEKMSTEIA 78
Query: 57 VFDNLNGCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRH 116
+ +L+ P V+ G E+ + Y ++LE +L +L ++ + E + R+
Sbjct: 79 IHKSLDN-PHVVGFHG----FFEDDDFVY-VVLEICRRRSLLELHKR--RKAVTEPEARY 130
Query: 117 FTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDP 176
F R ++G+ ++H++ +H D+K N+ L + KI D G+A + +K D
Sbjct: 131 FMRQTIQGVQYLHNNRVIHRDLKLGNLFL----NDDMDVKIGDFGLATKIEFDGERKKD- 185
Query: 177 SMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDE 236
+ GTP Y+APE + + DIW+LGC++ +L G+ + + C + I +E
Sbjct: 186 -LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF--ETSCLKETYIRIKKNE 242
Query: 237 HSLPEIPSRVSKEARDFLRRCFVRKPAFRFT-AEMLLDDPFVKG 279
+S +P ++ A +RR P R + AE+L D+ F G
Sbjct: 243 YS---VPRHINPVASALIRRMLHADPTLRPSVAELLTDEFFTSG 283
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 124/270 (45%), Gaps = 25/270 (9%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSSFL--PPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
GR +G+G FG V++A+ K + L L L++E E+ +L P +L
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNIL 76
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
+G + Y L+LEYA GT+ ++K + E+ + + + +
Sbjct: 77 RLYG----YFHDATRVY-LILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYC 129
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
H +H D+KP+N+LL + +G+ KIAD G + + +R ++ GT YL PE
Sbjct: 130 HSKRVIHRDIKPENLLLGS--AGEL--KIADFGWSVHAPSSRRT----TLCGTLDYLPPE 181
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGD-EHSLPEIPSRVS 247
+ + D+W+LG + E L G+ + E + + + I E + P+ V+
Sbjct: 182 XIEGRXHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQETYKRISRVEFTFPDF---VT 235
Query: 248 KEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
+ ARD + R P+ R +L+ P++
Sbjct: 236 EGARDLISRLLKHNPSQRPXLREVLEHPWI 265
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 116/274 (42%), Gaps = 27/274 (9%)
Query: 13 VIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLECFG 72
V+G G+F V +A+ K + ++ E V + P ++
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKH-PNIVAL-- 81
Query: 73 EEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSG 132
+ E+G Y L+++ +GG L D I E+D +L+ + ++HD G
Sbjct: 82 --DDIYESGGHLY-LIMQLVSGGELFDRI--VEKGFYTERDASRLIFQVLDAVKYLHDLG 136
Query: 133 YVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDP-----SMRGTPLYLAP 187
VH D+KP+N+L + + I+D G++K DP + GTP Y+AP
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIM-ISDFGLSKME--------DPGSVLSTACGTPGYVAP 187
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIP--SR 245
E + Q D W++G + +L G + + D +LF I + P
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDA---KLFEQILKAEYEFDSPYWDD 244
Query: 246 VSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKG 279
+S A+DF+R + P RFT E L P++ G
Sbjct: 245 ISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAG 278
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 111/236 (47%), Gaps = 41/236 (17%)
Query: 85 YNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNIL 144
+ L+ E+ L DL + NGL + V+ + I+ GIG H +H D+KP+NIL
Sbjct: 99 WYLVFEFVDHTILDDL--ELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENIL 156
Query: 145 LVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWA 203
+ +QSG V K+ D G A R+ + +D + T Y APE +V ++ + D+WA
Sbjct: 157 V--SQSG--VVKLCDFGFA-RTLAAPGEVYDDEV-ATRWYRAPELLVGDVKYGKAVDVWA 210
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQLFSI---IGD---EHS-------------LPEIPS 244
+GC+V EM G + D IDQL+ I +G+ H LPEI
Sbjct: 211 IGCLVTEMFMGEPLF--PGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKE 268
Query: 245 RVSKEAR---------DFLRRCFVRKPAFR-FTAEMLLDDPF-VKGVDEELSRELE 289
R E R D ++C P R F AE+L D F + G E S+EL+
Sbjct: 269 REPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMDGFAERFSQELQ 324
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 97/205 (47%), Gaps = 13/205 (6%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
L+LE+ +GG L D I + E +V ++ R EG+ H+H+ VH D+KP+NI+
Sbjct: 125 LILEFLSGGELFDRI-AAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCE 183
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGC 206
++ KI D G+A + + T + APE V + +D+WA+G
Sbjct: 184 TKKASS--VKIIDFGLATK---LNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGV 238
Query: 207 VVLEMLSGRQAWVVKEDCSIDQLFSIIG---DEHSLPEIPSRVSKEARDFLRRCFVRKPA 263
+ +LSG + ++D Q DE + S VS EA+DF++ ++P
Sbjct: 239 LGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAF----SSVSPEAKDFIKNLLQKEPR 294
Query: 264 FRFTAEMLLDDPFVKGVDEELSREL 288
R T L+ P++KG L+ +
Sbjct: 295 KRLTVHDALEHPWLKGDHSNLTSRI 319
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 128/273 (46%), Gaps = 20/273 (7%)
Query: 14 IGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLECFGE 73
+G G+ G VF K + + + + +E +V N P+++ +G
Sbjct: 33 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN-SPYIVGFYGA 91
Query: 74 EITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGY 133
+ GE ++ +E+ GG+L +++K +PE+ + + +++G+ ++ +
Sbjct: 92 FYSDGE-----ISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREKHK 144
Query: 134 V-HCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQ 192
+ H DVKP NIL+ + + K+ D GV+ + F GT Y++PE +
Sbjct: 145 IMHRDVKPSNILV----NSRGEIKLCDFGVSGQLIDSMANSF----VGTRSYMSPERLQG 196
Query: 193 HMQEAPSDIWALGCVVLEMLSGRQAWVVKE-DCSIDQLFSIIGDEHSLPEIPSRV-SKEA 250
SDIW++G ++EM GR +I +L I +E P++PS V S E
Sbjct: 197 THYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPP-PKLPSGVFSLEF 255
Query: 251 RDFLRRCFVRKPAFRFTAEMLLDDPFVKGVDEE 283
+DF+ +C ++ PA R + L+ F+K D E
Sbjct: 256 QDFVNKCLIKNPAERADLKQLMVHAFIKRSDAE 288
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 94/197 (47%), Gaps = 8/197 (4%)
Query: 82 EMAYNLLLEYAAGGTL-GDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKP 140
E + L+ + GG L D++ + E D H + ILE + H H G VH ++KP
Sbjct: 82 EGHHYLIFDLVTGGELFEDIVAR---EYYSEADASHCIQQILEAVLHCHQMGVVHRNLKP 138
Query: 141 DNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSD 200
+N+LL + G V K+AD G+A ++ F GTP YL+PE + + P D
Sbjct: 139 ENLLLASKLKGAAV-KLADFGLAIEVEGEQQAWF--GFAGTPGYLSPEVLRKDPYGKPVD 195
Query: 201 IWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVR 260
+WA G ++ +L G + ++ + Q + PE + V+ EA+D + +
Sbjct: 196 LWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDT-VTPEAKDLINKMLTI 254
Query: 261 KPAFRFTAEMLLDDPFV 277
P+ R TA L P++
Sbjct: 255 NPSKRITAAEALKHPWI 271
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 124/296 (41%), Gaps = 38/296 (12%)
Query: 14 IGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQ--KEKEVFDNLNGC--PFVLE 69
IG+G++G VF A+ N L L +E V +L P V+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 70 CFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIH 129
F + E L+ E+ L ++K G+P + ++ +L G+ +H
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 130 DSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPET 189
VH D+KP NIL+ T SG+ K+AD G+A R Q S+ T Y APE
Sbjct: 138 SHRVVHRDLKPQNILV--TSSGQI--KLADFGLA---RIYSFQMALTSVVVTLWYRAPEV 190
Query: 190 VVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSII------GDE------- 236
++Q P D+W++GC+ EM R+ + + +DQL I+ G+E
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMF--RRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVA 248
Query: 237 ------HSLPEIP-----SRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGVD 281
HS P + + + +D L +C PA R +A L P+ + ++
Sbjct: 249 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLE 304
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 115/266 (43%), Gaps = 29/266 (10%)
Query: 12 RVIGQGSFGCVFIAKPKSNSSF--LPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL- 68
RVIG+GS+ V + + K + + +Q EK VF+ + PF++
Sbjct: 58 RVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 117
Query: 69 --ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIG 126
CF E + ++EY GG L + LPE+ R ++ I +
Sbjct: 118 LHSCFQTESRLF--------FVIEYVNGGDL--MFHMQRQRKLPEEHARFYSAEISLALN 167
Query: 127 HIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLA 186
++H+ G ++ D+K DN+LL + K+ D G+ K + + GTP Y+A
Sbjct: 168 YLHERGIIYRDLKLDNVLLDSEGH----IKLTDYGMCKEG--LRPGDTTSTFCGTPNYIA 221
Query: 187 PETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVV------KEDCSIDQLFSIIGDEHSLP 240
PE + D WALG ++ EM++GR + + + + D LF +I ++
Sbjct: 222 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-- 279
Query: 241 EIPSRVSKEARDFLRRCFVRKPAFRF 266
IP +S +A L+ + P R
Sbjct: 280 RIPRSLSVKAASVLKSFLNKDPKERL 305
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 127/284 (44%), Gaps = 40/284 (14%)
Query: 8 WFRGRVIGQGSFG-C----------VFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKE 56
+ RGR +G+G F C VF K S L P + E
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKP---------HQKEKMSTEIA 94
Query: 57 VFDNLNGCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRH 116
+ +L+ P V+ G E+ + Y ++LE +L +L ++ + E + R+
Sbjct: 95 IHKSLDN-PHVVGFHG----FFEDDDFVY-VVLEICRRRSLLELHKR--RKAVTEPEARY 146
Query: 117 FTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDP 176
F R ++G+ ++H++ +H D+K N+ L + KI D G+A + +K
Sbjct: 147 FMRQTIQGVQYLHNNRVIHRDLKLGNLFL----NDDMDVKIGDFGLATKIEFDGERK--K 200
Query: 177 SMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDE 236
++ GTP Y+APE + + DIW+LGC++ +L G+ + + C + I +E
Sbjct: 201 TLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF--ETSCLKETYIRIKKNE 258
Query: 237 HSLPEIPSRVSKEARDFLRRCFVRKPAFRFT-AEMLLDDPFVKG 279
+S +P ++ A +RR P R + AE+L D+ F G
Sbjct: 259 YS---VPRHINPVASALIRRMLHADPTLRPSVAELLTDEFFTSG 299
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 124/296 (41%), Gaps = 38/296 (12%)
Query: 14 IGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQ--KEKEVFDNLNGC--PFVLE 69
IG+G++G VF A+ N L L +E V +L P V+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 70 CFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIH 129
F + E L+ E+ L ++K G+P + ++ +L G+ +H
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 130 DSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPET 189
VH D+KP NIL+ T SG+ K+AD G+A R Q S+ T Y APE
Sbjct: 138 SHRVVHRDLKPQNILV--TSSGQI--KLADFGLA---RIYSFQMALTSVVVTLWYRAPEV 190
Query: 190 VVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSII------GDE------- 236
++Q P D+W++GC+ EM R+ + + +DQL I+ G+E
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMF--RRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVA 248
Query: 237 ------HSLPEIP-----SRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGVD 281
HS P + + + +D L +C PA R +A L P+ + ++
Sbjct: 249 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLE 304
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 118/276 (42%), Gaps = 61/276 (22%)
Query: 12 RVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLECF 71
+VIG+G+F V + K K + K EV CF
Sbjct: 67 KVIGRGAFSEVAVVKMKQTGQ-------VYAMKIMNKWDMLKRGEV-----------SCF 108
Query: 72 GEEITMGENGEMAY--------------NLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHF 117
EE + NG+ + L++EY GG L L+ K G +P + R +
Sbjct: 109 REERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKF-GERIPAEMARFY 167
Query: 118 TRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPS 177
I+ I +H GYVH D+KPDNILL + G ++AD G C + + D +
Sbjct: 168 LAEIVMAIDSVHRLGYVHRDIKPDNILL--DRCGHI--RLADFG------SCLKLRADGT 217
Query: 178 MR-----GTPLYLAPETVVQHMQEAPS--------DIWALGCVVLEMLSGRQAWVVKEDC 224
+R GTP YL+PE ++Q + P D WALG EM G+ + D
Sbjct: 218 VRSLVAVGTPDYLSPE-ILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYA--DS 274
Query: 225 SIDQLFSIIG-DEH-SLPEIPSRVSKEARDFLRRCF 258
+ + I+ EH SLP + V +EARDF++R
Sbjct: 275 TAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLL 310
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 93/184 (50%), Gaps = 11/184 (5%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
+++EYA+GG L + I CN E + R F + ++ G+ + H H D+K +N LL
Sbjct: 92 IVMEYASGGELFERI--CNAGRFSEDEARFFFQQLISGVSYAHAMQVAHRDLKLENTLLD 149
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAP-SDIWALG 205
+ + + KIAD G +K S + K S GTP Y+APE +++ + +D+W+ G
Sbjct: 150 GSPAPRL--KIADFGYSKASVLHSQPK---SAVGTPAYIAPEVLLKKEYDGKVADVWSCG 204
Query: 206 CVVLEMLSGRQAWVVKEDCS--IDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPA 263
+ ML G + E+ + I+ ++++P+ +S E R + R FV PA
Sbjct: 205 VTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDY-VHISPECRHLISRIFVADPA 263
Query: 264 FRFT 267
R +
Sbjct: 264 KRIS 267
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 108/248 (43%), Gaps = 24/248 (9%)
Query: 10 RGRVIGQGSFGCVFIAKPKS--NSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
R R +G GSFG V + K K N + L EK + +N PF+
Sbjct: 46 RIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVN-FPFL 104
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ E + +N + ++LEYA GG + + + E R + I+ +
Sbjct: 105 VKL---EFSFKDNSNLY--MVLEYAPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEY 157
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H ++ D+KP+N+L+ Q G K+AD G AKR + + GTP YLAP
Sbjct: 158 LHSLDLIYRDLKPENLLI--DQQG--YIKVADFGFAKRVKGRTW-----XLCGTPEYLAP 208
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E ++ D WALG ++ EM +G + + I + I+ + PS S
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE--KIVSGK---VRFPSHFS 263
Query: 248 KEARDFLR 255
+ +D LR
Sbjct: 264 SDLKDLLR 271
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 122/293 (41%), Gaps = 38/293 (12%)
Query: 14 IGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQ--KEKEVFDNLNGC--PFVLE 69
IG+G++G VF A+ N L L +E V +L P V+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 70 CFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIH 129
F + E L+ E+ L ++K G+P + ++ +L G+ +H
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 130 DSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPET 189
VH D+KP NIL+ T SG+ K+AD G+A R Q S+ T Y APE
Sbjct: 138 SHRVVHRDLKPQNILV--TSSGQI--KLADFGLA---RIYSFQMALTSVVVTLWYRAPEV 190
Query: 190 VVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSII------GDE------- 236
++Q P D+W++GC+ EM R+ + + +DQL I+ G+E
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMF--RRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVA 248
Query: 237 ------HSLPEIP-----SRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVK 278
HS P + + + +D L +C PA R +A L P+ +
Sbjct: 249 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 114/266 (42%), Gaps = 29/266 (10%)
Query: 12 RVIGQGSFGCVFIAKPKSNSSF--LPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL- 68
RVIG+GS+ V + + K + + +Q EK VF+ + PF++
Sbjct: 26 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 85
Query: 69 --ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIG 126
CF E + ++EY GG L + LPE+ R ++ I +
Sbjct: 86 LHSCFQTESRLF--------FVIEYVNGGDL--MFHMQRQRKLPEEHARFYSAEISLALN 135
Query: 127 HIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLA 186
++H+ G ++ D+K DN+LL + K+ D G+ K + GTP Y+A
Sbjct: 136 YLHERGIIYRDLKLDNVLLDSEGH----IKLTDYGMCKEG--LRPGDTTSXFCGTPNYIA 189
Query: 187 PETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVV------KEDCSIDQLFSIIGDEHSLP 240
PE + D WALG ++ EM++GR + + + + D LF +I ++
Sbjct: 190 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-- 247
Query: 241 EIPSRVSKEARDFLRRCFVRKPAFRF 266
IP +S +A L+ + P R
Sbjct: 248 RIPRSMSVKAASVLKSFLNKDPKERL 273
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 104/208 (50%), Gaps = 18/208 (8%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
+++EYA+GG L + I CN E + R F + +L G+ + H H D+K +N LL
Sbjct: 93 IIMEYASGGELYERI--CNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLD 150
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAP-SDIWALG 205
+ + + KI D G +K S + K S GTP Y+APE +++ + +D+W+ G
Sbjct: 151 GSPAPRL--KICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLLRQEYDGKIADVWSCG 205
Query: 206 CVVLEMLSGRQAWVVKEDC-----SIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVR 260
+ ML G + E+ +I ++ S+ ++S+P+ R+S E + R FV
Sbjct: 206 VTLYVMLVGAYPFEDPEEPRDYRKTIQRILSV---KYSIPD-DIRISPECCHLISRIFVA 261
Query: 261 KPAFRFT-AEMLLDDPFVKGVDEELSRE 287
PA R + E+ F+K + +L E
Sbjct: 262 DPATRISIPEIKTHSWFLKNLPADLMNE 289
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 114/266 (42%), Gaps = 29/266 (10%)
Query: 12 RVIGQGSFGCVFIAKPKSNSSF--LPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL- 68
RVIG+GS+ V + + K + + +Q EK VF+ + PF++
Sbjct: 11 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 70
Query: 69 --ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIG 126
CF E + ++EY GG L + LPE+ R ++ I +
Sbjct: 71 LHSCFQTESRLF--------FVIEYVNGGDL--MFHMQRQRKLPEEHARFYSAEISLALN 120
Query: 127 HIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLA 186
++H+ G ++ D+K DN+LL + K+ D G+ K + GTP Y+A
Sbjct: 121 YLHERGIIYRDLKLDNVLLDSEGH----IKLTDYGMCKEG--LRPGDTTSXFCGTPNYIA 174
Query: 187 PETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVV------KEDCSIDQLFSIIGDEHSLP 240
PE + D WALG ++ EM++GR + + + + D LF +I ++
Sbjct: 175 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-- 232
Query: 241 EIPSRVSKEARDFLRRCFVRKPAFRF 266
IP +S +A L+ + P R
Sbjct: 233 RIPRSLSVKAASVLKSFLNKDPKERL 258
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 120/251 (47%), Gaps = 25/251 (9%)
Query: 12 RVIGQGSFGCVFIAKPKSNSSF--LPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLE 69
+VIG+G+FG V + + KS + L +E+++ N P+V++
Sbjct: 75 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN-SPWVVQ 133
Query: 70 CFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIH 129
F ++ Y +++EY GG DL+ + +PEK R +T ++ + IH
Sbjct: 134 LF----YAFQDDRYLY-MVMEYMPGG---DLVNLMSNYDVPEKWARFYTAEVVLALDAIH 185
Query: 130 DSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPET 189
G++H DVKPDN+LL +SG K+AD G + + D ++ GTP Y++PE
Sbjct: 186 SMGFIHRDVKPDNMLL--DKSGHL--KLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEV 240
Query: 190 VVQHMQEAPS----DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSL--PEIP 243
+ + D W++G + EML G + D + I+ ++SL P+
Sbjct: 241 LKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA--DSLVGTYSKIMNHKNSLTFPD-D 297
Query: 244 SRVSKEARDFL 254
+ +SKEA++ +
Sbjct: 298 NDISKEAKNLI 308
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 106/216 (49%), Gaps = 17/216 (7%)
Query: 53 KEKEVFDNLNGCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIE--KCNGNGLP 110
KE ++ LN P V++ + I E+ E+ N++LE A G L +I+ K +P
Sbjct: 81 KEIDLLKQLNH-PNVIKYYASFI---EDNEL--NIVLELADAGDLSRMIKHFKKQKRLIP 134
Query: 111 EKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCK 170
E+ V + + + H+H +H D+KP N+ + AT V K+ DLG+ +
Sbjct: 135 ERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATG----VVKLGDLGLGRF--FSS 188
Query: 171 RQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLF 230
+ S+ GTP Y++PE + ++ SDIW+LGC++ EM + Q+ + ++ L
Sbjct: 189 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEM-AALQSPFYGDKMNLYSLC 247
Query: 231 SIIGDEHSLPEIPS-RVSKEARDFLRRCFVRKPAFR 265
I ++ P +PS S+E R + C P R
Sbjct: 248 KKI-EQCDYPPLPSDHYSEELRQLVNMCINPDPEKR 282
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 120/251 (47%), Gaps = 25/251 (9%)
Query: 12 RVIGQGSFGCVFIAKPKSNSSF--LPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLE 69
+VIG+G+FG V + + KS + L +E+++ N P+V++
Sbjct: 80 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN-SPWVVQ 138
Query: 70 CFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIH 129
F ++ Y +++EY GG DL+ + +PEK R +T ++ + IH
Sbjct: 139 LF----YAFQDDRYLY-MVMEYMPGG---DLVNLMSNYDVPEKWARFYTAEVVLALDAIH 190
Query: 130 DSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPET 189
G++H DVKPDN+LL +SG K+AD G + + D ++ GTP Y++PE
Sbjct: 191 SMGFIHRDVKPDNMLL--DKSGHL--KLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEV 245
Query: 190 VVQHMQEAPS----DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSL--PEIP 243
+ + D W++G + EML G + D + I+ ++SL P+
Sbjct: 246 LKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA--DSLVGTYSKIMNHKNSLTFPD-D 302
Query: 244 SRVSKEARDFL 254
+ +SKEA++ +
Sbjct: 303 NDISKEAKNLI 313
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 120/251 (47%), Gaps = 25/251 (9%)
Query: 12 RVIGQGSFGCVFIAKPKSNSSF--LPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLE 69
+VIG+G+FG V + + KS + L +E+++ N P+V++
Sbjct: 80 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN-SPWVVQ 138
Query: 70 CFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIH 129
F ++ Y +++EY GG DL+ + +PEK R +T ++ + IH
Sbjct: 139 LF----YAFQDDRYLY-MVMEYMPGG---DLVNLMSNYDVPEKWARFYTAEVVLALDAIH 190
Query: 130 DSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPET 189
G++H DVKPDN+LL +SG K+AD G + + D ++ GTP Y++PE
Sbjct: 191 SMGFIHRDVKPDNMLL--DKSGHL--KLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEV 245
Query: 190 VVQHMQEAPS----DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSL--PEIP 243
+ + D W++G + EML G + D + I+ ++SL P+
Sbjct: 246 LKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA--DSLVGTYSKIMNHKNSLTFPD-D 302
Query: 244 SRVSKEARDFL 254
+ +SKEA++ +
Sbjct: 303 NDISKEAKNLI 313
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 126/284 (44%), Gaps = 40/284 (14%)
Query: 8 WFRGRVIGQGSFG-C----------VFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKE 56
+ RGR +G+G F C VF K S L P + E
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKP---------HQKEKMSTEIA 94
Query: 57 VFDNLNGCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRH 116
+ +L+ P V+ G E+ + Y ++LE +L +L ++ + E + R+
Sbjct: 95 IHKSLDN-PHVVGFHG----FFEDDDFVY-VVLEICRRRSLLELHKR--RKAVTEPEARY 146
Query: 117 FTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDP 176
F R ++G+ ++H++ +H D+K N+ L + KI D G+A + +K
Sbjct: 147 FMRQTIQGVQYLHNNRVIHRDLKLGNLFL----NDDMDVKIGDFGLATKIEFDGERK--K 200
Query: 177 SMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDE 236
+ GTP Y+APE + + DIW+LGC++ +L G+ + + C + I +E
Sbjct: 201 XLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF--ETSCLKETYIRIKKNE 258
Query: 237 HSLPEIPSRVSKEARDFLRRCFVRKPAFRFT-AEMLLDDPFVKG 279
+S +P ++ A +RR P R + AE+L D+ F G
Sbjct: 259 YS---VPRHINPVASALIRRMLHADPTLRPSVAELLTDEFFTSG 299
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 123/274 (44%), Gaps = 16/274 (5%)
Query: 12 RVIGQGSFGCVFIAKPKSNSS--FLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLE 69
RV+G+GSFG V + K K + + L +E ++ L+ P +++
Sbjct: 38 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH-PNIMK 96
Query: 70 CFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIH 129
+ E+ Y L+ E GG L D E + E D R +L GI ++H
Sbjct: 97 LY----EFFEDKGYFY-LVGEVYTGGELFD--EIISRKRFSEVDAARIIRQVLSGITYMH 149
Query: 130 DSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPET 189
+ VH D+KP+N+LL ++S +I D G++ K+ K GT Y+APE
Sbjct: 150 KNKIVHRDLKPENLLL-ESKSKDANIRIIDFGLSTHFEASKKMK---DKIGTAYYIAPE- 204
Query: 190 VVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKE 249
V+ + D+W+ G ++ +LSG + + I + LP+ +VS+
Sbjct: 205 VLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW-KKVSES 263
Query: 250 ARDFLRRCFVRKPAFRFTAEMLLDDPFVKGVDEE 283
A+D +R+ P+ R +A LD +++ +E
Sbjct: 264 AKDLIRKMLTYVPSMRISARDALDHEWIQTYTKE 297
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 114/266 (42%), Gaps = 29/266 (10%)
Query: 12 RVIGQGSFGCVFIAKPKSNSSF--LPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL- 68
RVIG+GS+ V + + K + + +Q EK VF+ + PF++
Sbjct: 15 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 74
Query: 69 --ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIG 126
CF E + ++EY GG L + LPE+ R ++ I +
Sbjct: 75 LHSCFQTESRLF--------FVIEYVNGGDL--MFHMQRQRKLPEEHARFYSAEISLALN 124
Query: 127 HIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLA 186
++H+ G ++ D+K DN+LL + K+ D G+ K + GTP Y+A
Sbjct: 125 YLHERGIIYRDLKLDNVLLDSEGH----IKLTDYGMCKEG--LRPGDTTSXFCGTPNYIA 178
Query: 187 PETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVV------KEDCSIDQLFSIIGDEHSLP 240
PE + D WALG ++ EM++GR + + + + D LF +I ++
Sbjct: 179 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-- 236
Query: 241 EIPSRVSKEARDFLRRCFVRKPAFRF 266
IP +S +A L+ + P R
Sbjct: 237 RIPRSLSVKAASVLKSFLNKDPKERL 262
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 130/280 (46%), Gaps = 21/280 (7%)
Query: 9 FRG-RVIGQGSFGCVFIAKPKSNSS--FLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCP 65
++G RV+G+GSFG V + K K + + L +E ++ L+ P
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH-P 86
Query: 66 FVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGI 125
+++ + E+ Y L+ E GG L D E + E D R +L GI
Sbjct: 87 NIMKLY----EFFEDKGYFY-LVGEVYTGGELFD--EIISRKRFSEVDAARIIRQVLSGI 139
Query: 126 GHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYL 185
++H + VH D+KP+N+LL ++S +I D G++ K+ K GT Y+
Sbjct: 140 TYMHKNKIVHRDLKPENLLL-ESKSKDANIRIIDFGLSTHFEASKKMK---DKIGTAYYI 195
Query: 186 APETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPS- 244
APE V+ + D+W+ G ++ +LSG + + I L + +++ E+P
Sbjct: 196 APE-VLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDI--LKKVEKGKYTF-ELPQW 251
Query: 245 -RVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGVDEE 283
+VS+ A+D +R+ P+ R +A LD +++ +E
Sbjct: 252 KKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKE 291
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 130/280 (46%), Gaps = 21/280 (7%)
Query: 9 FRG-RVIGQGSFGCVFIAKPKSNSS--FLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCP 65
++G RV+G+GSFG V + K K + + L +E ++ L+ P
Sbjct: 51 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HP 109
Query: 66 FVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGI 125
+++ + E+ Y L+ E GG L D I + E D R +L GI
Sbjct: 110 NIMKLY----EFFEDKGYFY-LVGEVYTGGELFDEI--ISRKRFSEVDAARIIRQVLSGI 162
Query: 126 GHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYL 185
++H + VH D+KP+N+LL ++S +I D G++ K+ K GT Y+
Sbjct: 163 TYMHKNKIVHRDLKPENLLL-ESKSKDANIRIIDFGLSTHFEASKKMK---DKIGTAYYI 218
Query: 186 APETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPS- 244
APE V+ + D+W+ G ++ +LSG + + I L + +++ E+P
Sbjct: 219 APE-VLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDI--LKKVEKGKYTF-ELPQW 274
Query: 245 -RVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGVDEE 283
+VS+ A+D +R+ P+ R +A LD +++ +E
Sbjct: 275 KKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKE 314
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 130/280 (46%), Gaps = 21/280 (7%)
Query: 9 FRG-RVIGQGSFGCVFIAKPKSNSS--FLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCP 65
++G RV+G+GSFG V + K K + + L +E ++ L+ P
Sbjct: 52 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HP 110
Query: 66 FVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGI 125
+++ + E+ Y L+ E GG L D I + E D R +L GI
Sbjct: 111 NIMKLY----EFFEDKGYFY-LVGEVYTGGELFDEI--ISRKRFSEVDAARIIRQVLSGI 163
Query: 126 GHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYL 185
++H + VH D+KP+N+LL ++S +I D G++ K+ K GT Y+
Sbjct: 164 TYMHKNKIVHRDLKPENLLL-ESKSKDANIRIIDFGLSTHFEASKKMK---DKIGTAYYI 219
Query: 186 APETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPS- 244
APE V+ + D+W+ G ++ +LSG + + I L + +++ E+P
Sbjct: 220 APE-VLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDI--LKKVEKGKYTF-ELPQW 275
Query: 245 -RVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGVDEE 283
+VS+ A+D +R+ P+ R +A LD +++ +E
Sbjct: 276 KKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKE 315
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 107/250 (42%), Gaps = 24/250 (9%)
Query: 10 RGRVIGQGSFGCVFIAKPKS--NSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
R + +G GSFG V + K K N + L EK + +N PF+
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFL 103
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ E + +N + +++EY AGG + + + E R + I+ +
Sbjct: 104 VKL---EFSFKDNSNLY--MVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEY 156
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H ++ D+KP+N+L+ Q G ++ D G AKR + + GTP YLAP
Sbjct: 157 LHSLDLIYRDLKPENLLI--DQQG--YIQVTDFGFAKRVKGRTW-----XLXGTPEYLAP 207
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E ++ D WALG ++ EM +G + + I + I+ + PS S
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE--KIVSGK---VRFPSHFS 262
Query: 248 KEARDFLRRC 257
+ +D LR
Sbjct: 263 SDLKDLLRNL 272
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 108/250 (43%), Gaps = 24/250 (9%)
Query: 10 RGRVIGQGSFGCVFIAKPKS--NSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
R + +G GSFG V + K K N + L EK + +N PF+
Sbjct: 66 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFL 124
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ E + +N + +++EY AGG + + + E R + I+ +
Sbjct: 125 VKL---EFSFKDNSNLY--MVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEY 177
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H ++ D+KP+N+L+ Q G ++ D G AKR + ++ GTP YLAP
Sbjct: 178 LHSLDLIYRDLKPENLLI--DQQG--YIQVTDFGFAKRVKGATW-----TLCGTPEYLAP 228
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E ++ D WALG ++ EM +G + + I + I+ + PS S
Sbjct: 229 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE--KIVSGK---VRFPSHFS 283
Query: 248 KEARDFLRRC 257
+ +D LR
Sbjct: 284 SDLKDLLRNL 293
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 18/219 (8%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
L+++ +GG L D I EKD R +L+ + ++H G VH D+KP+N LL
Sbjct: 97 LVMQLVSGGELFDRI--VEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPEN-LLY 153
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGC 206
+Q + I+D G++K + + GTP Y+APE + Q D W++G
Sbjct: 154 YSQDEESKIMISDFGLSKME---GKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGV 210
Query: 207 VVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIP--SRVSKEARDFLRRCFVRKPAF 264
+ +L G + + D +LF I + P +S A+DF+R + P
Sbjct: 211 IAYILLCGYPPFYDENDS---KLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPNK 267
Query: 265 RFTAEMLLDDPFVKG-------VDEELSRELEGDYSQGE 296
R+T E P++ G + E +S ++ ++++ +
Sbjct: 268 RYTCEQAARHPWIAGDTALNKNIHESVSAQIRKNFAKSK 306
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 107/250 (42%), Gaps = 24/250 (9%)
Query: 10 RGRVIGQGSFGCVFIAKPKS--NSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
R + +G GSFG V + K K N + L EK + +N PF+
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFL 103
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ E + +N + +++EY AGG + + + E R + I+ +
Sbjct: 104 VKL---EFSFKDNSNLY--MVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEY 156
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H ++ D+KP+N+L+ Q G ++ D G AKR + + GTP YLAP
Sbjct: 157 LHSLDLIYRDLKPENLLI--DQQG--YIQVTDFGFAKRVKGRTW-----XLAGTPEYLAP 207
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E ++ D WALG ++ EM +G + + I + I+ + PS S
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE--KIVSGK---VRFPSHFS 262
Query: 248 KEARDFLRRC 257
+ +D LR
Sbjct: 263 SDLKDLLRNL 272
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 107/248 (43%), Gaps = 24/248 (9%)
Query: 10 RGRVIGQGSFGCVFIAKPKS--NSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
R + +G GSFG V + K K N + L EK + +N PF+
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFL 103
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ E + +N + +++EY AGG + + + E R + I+ +
Sbjct: 104 VKL---EFSFKDNSNLY--MVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEY 156
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H ++ D+KP+N+L+ Q G ++ D G AKR + + GTP YLAP
Sbjct: 157 LHSLDLIYRDLKPENLLI--DQQG--YIQVTDFGFAKRVKGRTW-----XLCGTPEYLAP 207
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E ++ D WALG ++ EM +G + E I + I+ + PS S
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYE--KIVSGK---VRFPSHFS 262
Query: 248 KEARDFLR 255
+ +D LR
Sbjct: 263 SDLKDLLR 270
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 144/312 (46%), Gaps = 39/312 (12%)
Query: 12 RVIGQGSFGCVFIAKPKSNSS----FLPPLMXXXXXXXXX--XXXLQKEKEVFDNLNGCP 65
RV+G+G +G VF + + ++ F ++ + E+ + + + P
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVK-HP 81
Query: 66 FVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRC-ILEG 124
F+++ I + G Y L+LEY +GG L +E+ G+ +D F I
Sbjct: 82 FIVDL----IYAFQTGGKLY-LILEYLSGGELFMQLER---EGIFMEDTACFYLAEISMA 133
Query: 125 IGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLY 184
+GH+H G ++ D+KP+NI+L G K+ D G+ K S H + GT Y
Sbjct: 134 LGHLHQKGIIYRDLKPENIML--NHQGH--VKLTDFGLCKESIH--DGTVTHTFCGTIEY 187
Query: 185 LAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVK-EDCSIDQLFSIIGDEHSLPEIP 243
+APE +++ D W+LG ++ +ML+G + + +ID++ + +P
Sbjct: 188 MAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLN------LP 241
Query: 244 SRVSKEARDFLRRCFVRKPAFRF-----TAEMLLDDPFVKGVDEE--LSRELEGDYS--- 293
+++EARD L++ R A R A + PF + ++ E L+R++E +
Sbjct: 242 PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFKPLL 301
Query: 294 QGEVTLSNADAE 305
Q E +S D++
Sbjct: 302 QSEEDVSQFDSK 313
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 131/304 (43%), Gaps = 25/304 (8%)
Query: 14 IGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEV-FDNLNGCPFVLECFG 72
+G+GSFG V +A + ++ E+E+ + L P +++ +
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLY- 75
Query: 73 EEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSG 132
+ IT + M ++EYA G ++EK + E + R F + I+ I + H
Sbjct: 76 DVITTPTDIVM----VIEYAGGELFDYIVEK---KRMTEDEGRRFFQQIICAIEYCHRHK 128
Query: 133 YVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQ 192
VH D+KP+N+LL KIAD G+ S F + G+P Y APE +
Sbjct: 129 IVHRDLKPENLLL----DDNLNVKIADFGL---SNIMTDGNFLKTSCGSPNYAAPEVING 181
Query: 193 HMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEAR 251
+ P D+W+ G V+ ML GR + +D I LF + + +P +S A+
Sbjct: 182 KLYAGPEVDVWSCGIVLYVMLVGRLPF---DDEFIPNLFKKVNS--CVYVMPDFLSPGAQ 236
Query: 252 DFLRRCFVRKPAFRFTAEMLLDDPFVKGVDEELSR---ELEGDYSQGEVTLSNADAESCS 308
+RR V P R T + + DP+ + R E++G Y+ + +A S
Sbjct: 237 SLIRRMIVADPMQRITIQEIRRDPWFNVNLPDYLRPMEEVQGSYADSRIVSKLGEAMGFS 296
Query: 309 PECI 312
+ I
Sbjct: 297 EDYI 300
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 92/184 (50%), Gaps = 11/184 (5%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
+++EYA+GG L + I CN E + R F + ++ G+ + H H D+K +N LL
Sbjct: 92 IVMEYASGGELFERI--CNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLD 149
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAP-SDIWALG 205
+ + + KI D G +K S + K S GTP Y+APE +++ + +D+W+ G
Sbjct: 150 GSPAPRL--KICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLLKKEYDGKVADVWSCG 204
Query: 206 CVVLEMLSGRQAWVVKEDCS--IDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPA 263
+ ML G + E+ + I+ ++++P+ +S E R + R FV PA
Sbjct: 205 VTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDY-VHISPECRHLISRIFVADPA 263
Query: 264 FRFT 267
R +
Sbjct: 264 KRIS 267
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 86/176 (48%), Gaps = 11/176 (6%)
Query: 85 YNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNIL 144
Y L++EY G TL + IE + L +FT IL+GI H HD VH D+KP NIL
Sbjct: 86 YYLVMEYIEGPTLSEYIE--SHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNIL 143
Query: 145 LVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWAL 204
+ + ++ KI D G+AK + + + GT Y +PE + +DI+++
Sbjct: 144 IDSNKT----LKIFDFGIAKALSETSLTQTNHVL-GTVQYFSPEQAKGEATDECTDIYSI 198
Query: 205 GCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVR 260
G V+ EML G + + SI +I + S+P + + V K+ L +R
Sbjct: 199 GIVLYEMLVGEPPFNGETAVSI----AIKHIQDSVPNVTTDVRKDIPQSLSNVILR 250
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 92/184 (50%), Gaps = 11/184 (5%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
+++EYA+GG L + I CN E + R F + ++ G+ + H H D+K +N LL
Sbjct: 91 IVMEYASGGELFERI--CNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLD 148
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAP-SDIWALG 205
+ + + KI D G +K S + K S GTP Y+APE +++ + +D+W+ G
Sbjct: 149 GSPAPRL--KICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLLKKEYDGKVADVWSCG 203
Query: 206 CVVLEMLSGRQAWVVKEDCS--IDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPA 263
+ ML G + E+ + I+ ++++P+ +S E R + R FV PA
Sbjct: 204 VTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDY-VHISPECRHLISRIFVADPA 262
Query: 264 FRFT 267
R +
Sbjct: 263 KRIS 266
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 106/248 (42%), Gaps = 24/248 (9%)
Query: 10 RGRVIGQGSFGCVFIAKPKS--NSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
R + +G GSFG V + K K N + L EK + +N PF+
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFL 103
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ E + +N + +++EY AGG + + + E R + I+ +
Sbjct: 104 VKL---EFSFKDNSNLY--MVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEY 156
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H ++ D+KP+N L+ Q G ++ D G AKR + + GTP YLAP
Sbjct: 157 LHSLDLIYRDLKPEN--LIIDQQG--YIQVTDFGFAKRVKGRTW-----XLCGTPEYLAP 207
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E ++ D WALG ++ EM +G + + I + I+ + PS S
Sbjct: 208 EIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE--KIVSGK---VRFPSHFS 262
Query: 248 KEARDFLR 255
+ +D LR
Sbjct: 263 SDLKDLLR 270
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 107/248 (43%), Gaps = 24/248 (9%)
Query: 10 RGRVIGQGSFGCVFIAKPKS--NSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
R + +G GSFG V + K K N + L EK + +N PF+
Sbjct: 46 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFL 104
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ E + +N + +++EY AGG + + + E R + I+ +
Sbjct: 105 VKL---EFSFKDNSNLY--MVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEY 157
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H ++ D+KP+N+L+ Q G ++ D G AKR + + GTP YLAP
Sbjct: 158 LHSLDLIYRDLKPENLLI--DQQG--YIQVTDFGFAKRVKGRTW-----XLCGTPEYLAP 208
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E ++ D WALG ++ EM +G + + I + I+ + PS S
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE--KIVSGK---VRFPSHFS 263
Query: 248 KEARDFLR 255
+ +D LR
Sbjct: 264 SDLKDLLR 271
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 107/248 (43%), Gaps = 24/248 (9%)
Query: 10 RGRVIGQGSFGCVFIAKPKS--NSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
R + +G GSFG V + K K N + L EK + +N PF+
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFL 103
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ E + +N + +++EY AGG + + + P R + I+ +
Sbjct: 104 VKL---EFSFKDNSNLY--MVMEYVAGGEMFSHLRRIGRFAEPH--ARFYAAQIVLTFEY 156
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H ++ D+KP+N+L+ Q G ++ D G AKR + + GTP YLAP
Sbjct: 157 LHSLDLIYRDLKPENLLI--DQQG--YIQVTDFGFAKRVKGRTW-----XLCGTPEYLAP 207
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E ++ D WALG ++ EM +G + + I + I+ + PS S
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE--KIVSGK---VRFPSHFS 262
Query: 248 KEARDFLR 255
+ +D LR
Sbjct: 263 SDLKDLLR 270
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 107/248 (43%), Gaps = 24/248 (9%)
Query: 10 RGRVIGQGSFGCVFIAKPKS--NSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
R + +G GSFG V + K K N + L EK + +N PF+
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFL 103
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ E + +N + +++EY AGG + + + E R + I+ +
Sbjct: 104 VKL---EFSFKDNSNLY--MVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEY 156
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H ++ D+KP+N+L+ Q G ++ D G AKR + + GTP YLAP
Sbjct: 157 LHSLDLIYRDLKPENLLI--DQQG--YIQVTDFGFAKRVKGRTW-----XLCGTPEYLAP 207
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E ++ D WALG ++ EM +G + + I + I+ + PS S
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE--KIVSGK---VRFPSHFS 262
Query: 248 KEARDFLR 255
+ +D LR
Sbjct: 263 SDLKDLLR 270
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 107/250 (42%), Gaps = 24/250 (9%)
Query: 10 RGRVIGQGSFGCVFIAKPKS--NSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
R + +G GSFG V + K K N + L EK + +N PF+
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFL 103
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ E + +N + +++EY AGG + + + E R + I+ +
Sbjct: 104 VKL---EFSFKDNSNLY--MVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEY 156
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H ++ D+KP+N+L+ Q G ++ D G AKR + + GTP YLAP
Sbjct: 157 LHSLDLIYRDLKPENLLI--DQQG--YIQVTDFGFAKRVKGRTW-----XLCGTPEYLAP 207
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E ++ D WALG ++ EM +G + + I + I+ + PS S
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE--KIVSGK---VRFPSHFS 262
Query: 248 KEARDFLRRC 257
+ +D LR
Sbjct: 263 SDLKDLLRNL 272
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 128/280 (45%), Gaps = 21/280 (7%)
Query: 9 FRG-RVIGQGSFGCVFIAKPKSNSS--FLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCP 65
++G RV+G+GSFG V + K K + + L +E ++ L+ P
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HP 86
Query: 66 FVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGI 125
+ + + E+ Y L+ E GG L D I + E D R +L GI
Sbjct: 87 NIXKLY----EFFEDKGYFY-LVGEVYTGGELFDEI--ISRKRFSEVDAARIIRQVLSGI 139
Query: 126 GHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYL 185
+ H + VH D+KP+N+LL ++S +I D G+ S H + K GT Y+
Sbjct: 140 TYXHKNKIVHRDLKPENLLL-ESKSKDANIRIIDFGL---STHFEASKKXKDKIGTAYYI 195
Query: 186 APETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPS- 244
APE V+ + D+W+ G ++ +LSG + + I L + +++ E+P
Sbjct: 196 APE-VLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDI--LKKVEKGKYTF-ELPQW 251
Query: 245 -RVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGVDEE 283
+VS+ A+D +R+ P+ R +A LD +++ +E
Sbjct: 252 KKVSESAKDLIRKXLTYVPSXRISARDALDHEWIQTYTKE 291
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 107/248 (43%), Gaps = 24/248 (9%)
Query: 10 RGRVIGQGSFGCVFIAKPKS--NSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
R + +G GSFG V + K K N + L EK + +N PF+
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFL 103
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ E + +N + +++EY AGG + + + E R + I+ +
Sbjct: 104 VKL---EFSFKDNSNLY--MVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEY 156
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H ++ D+KP+N+L+ Q G ++ D G AKR + + GTP YLAP
Sbjct: 157 LHSLDLIYRDLKPENLLI--DQQG--YIQVTDFGFAKRVKGRTW-----XLCGTPEYLAP 207
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E ++ D WALG ++ EM +G + + I + I+ + PS S
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE--KIVSGK---VRFPSHFS 262
Query: 248 KEARDFLR 255
+ +D LR
Sbjct: 263 SDLKDLLR 270
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 107/248 (43%), Gaps = 24/248 (9%)
Query: 10 RGRVIGQGSFGCVFIAKPKS--NSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
R + +G GSFG V + K K N + L EK + +N PF+
Sbjct: 46 RIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFL 104
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ E + +N + +++EYA GG + + + E R + I+ +
Sbjct: 105 VKL---EFSFKDNSNLY--MVMEYAPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEY 157
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H ++ D+KP+N+++ Q G K+ D G AKR + + GTP YLAP
Sbjct: 158 LHSLDLIYRDLKPENLMI--DQQG--YIKVTDFGFAKRVKGRTW-----XLCGTPEYLAP 208
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E ++ D WALG ++ EM +G + + I + I+ + PS S
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE--KIVSGK---VRFPSHFS 263
Query: 248 KEARDFLR 255
+ +D LR
Sbjct: 264 SDLKDLLR 271
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 107/248 (43%), Gaps = 24/248 (9%)
Query: 10 RGRVIGQGSFGCVFIAKPKS--NSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
R + +G GSFG V + K K N + L EK + +N PF+
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFL 103
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ E + +N + +++EY AGG + + + E R + I+ +
Sbjct: 104 VKL---EFSFKDNSNLY--MVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEY 156
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H ++ D+KP+N+L+ Q G ++ D G AKR + + GTP YLAP
Sbjct: 157 LHSLDLIYRDLKPENLLI--DQQG--YIQVTDFGFAKRVKGRTW-----XLCGTPEYLAP 207
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E ++ D WALG ++ EM +G + + I + I+ + PS S
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE--KIVSGK---VRFPSHFS 262
Query: 248 KEARDFLR 255
+ +D LR
Sbjct: 263 SDLKDLLR 270
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 9/197 (4%)
Query: 82 EMAYNLLLEYAAGGTL-GDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKP 140
E + L+ + GG L D++ + E D H + ILE I + H +G VH ++KP
Sbjct: 77 ESFHYLVFDLVTGGELFEDIVAR---EFYSEADASHCIQQILESIAYCHSNGIVHRNLKP 133
Query: 141 DNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSD 200
+N+LL + G V K+AD G+A + GTP YL+PE + + P D
Sbjct: 134 ENLLLASKAKGAAV-KLADFGLAIEVNDSEAWH---GFAGTPGYLSPEVLKKDPYSKPVD 189
Query: 201 IWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVR 260
IWA G ++ +L G + ++ + ++ PE + V+ EA+ +
Sbjct: 190 IWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDT-VTPEAKSLIDSMLTV 248
Query: 261 KPAFRFTAEMLLDDPFV 277
P R TA+ L P++
Sbjct: 249 NPKKRITADQALKVPWI 265
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 9/197 (4%)
Query: 82 EMAYNLLLEYAAGGTL-GDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKP 140
E + L+ + GG L D++ + E D H + ILE I + H +G VH ++KP
Sbjct: 100 ESFHYLVFDLVTGGELFEDIVAR---EFYSEADASHCIQQILESIAYCHSNGIVHRNLKP 156
Query: 141 DNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSD 200
+N+LL + G V K+AD G+A + GTP YL+PE + + P D
Sbjct: 157 ENLLLASKAKGAAV-KLADFGLAIEVNDSEAWH---GFAGTPGYLSPEVLKKDPYSKPVD 212
Query: 201 IWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVR 260
IWA G ++ +L G + ++ + ++ PE + V+ EA+ +
Sbjct: 213 IWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDT-VTPEAKSLIDSMLTV 271
Query: 261 KPAFRFTAEMLLDDPFV 277
P R TA+ L P++
Sbjct: 272 NPKKRITADQALKVPWI 288
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 107/248 (43%), Gaps = 24/248 (9%)
Query: 10 RGRVIGQGSFGCVFIAKPKS--NSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
R + +G GSFG V + K K N + L EK + +N PF+
Sbjct: 40 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFL 98
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ E + +N + +++EY AGG + + + E R + I+ +
Sbjct: 99 VKL---EFSFKDNSNLY--MVMEYVAGGEMFSHLRRIGR--FXEPHARFYAAQIVLTFEY 151
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H ++ D+KP+N+L+ Q G ++ D G AKR + + GTP YLAP
Sbjct: 152 LHSLDLIYRDLKPENLLI--DQQG--YIQVTDFGFAKRVKGRTW-----XLCGTPEYLAP 202
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E ++ D WALG ++ EM +G + + I + I+ + PS S
Sbjct: 203 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE--KIVSGK---VRFPSHFS 257
Query: 248 KEARDFLR 255
+ +D LR
Sbjct: 258 SDLKDLLR 265
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 143/312 (45%), Gaps = 39/312 (12%)
Query: 12 RVIGQGSFGCVFIAKPKSNSS----FLPPLMXXXXXXXXX--XXXLQKEKEVFDNLNGCP 65
RV+G+G +G VF + + ++ F ++ + E+ + + + P
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVK-HP 81
Query: 66 FVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRC-ILEG 124
F+++ I + G Y L+LEY +GG L +E+ G+ +D F I
Sbjct: 82 FIVDL----IYAFQTGGKLY-LILEYLSGGELFMQLER---EGIFMEDTACFYLAEISMA 133
Query: 125 IGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLY 184
+GH+H G ++ D+KP+NI+L G K+ D G+ K S H GT Y
Sbjct: 134 LGHLHQKGIIYRDLKPENIML--NHQGH--VKLTDFGLCKESIH--DGTVTHXFCGTIEY 187
Query: 185 LAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVK-EDCSIDQLFSIIGDEHSLPEIP 243
+APE +++ D W+LG ++ +ML+G + + +ID++ + +P
Sbjct: 188 MAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLN------LP 241
Query: 244 SRVSKEARDFLRRCFVRKPAFRF-----TAEMLLDDPFVKGVDEE--LSRELEGDYS--- 293
+++EARD L++ R A R A + PF + ++ E L+R++E +
Sbjct: 242 PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFKPLL 301
Query: 294 QGEVTLSNADAE 305
Q E +S D++
Sbjct: 302 QSEEDVSQFDSK 313
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 107/248 (43%), Gaps = 24/248 (9%)
Query: 10 RGRVIGQGSFGCVFIAKPKS--NSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
R + +G GSFG V + K K N + L EK + +N PF+
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFL 103
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ E + +N + +++EY AGG + + + E R + I+ +
Sbjct: 104 VKL---EFSFKDNSNLY--MVMEYVAGGEMFSHLRRIGR--FXEPHARFYAAQIVLTFEY 156
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H ++ D+KP+N+L+ Q G ++ D G AKR + + GTP YLAP
Sbjct: 157 LHSLDLIYRDLKPENLLI--DQQG--YIQVTDFGFAKRVKGRTW-----XLCGTPEYLAP 207
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E ++ D WALG ++ EM +G + + I + I+ + PS S
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE--KIVSGK---VRFPSHFS 262
Query: 248 KEARDFLR 255
+ +D LR
Sbjct: 263 SDLKDLLR 270
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 106/248 (42%), Gaps = 24/248 (9%)
Query: 10 RGRVIGQGSFGCVFIAK--PKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
R + IG GSFG V + K N + L EK + +N PF+
Sbjct: 45 RIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFL 103
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ E + +N + +++EY GG + + + E R + I+ +
Sbjct: 104 VKL---EFSFKDNSNLY--MVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEY 156
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H ++ D+KP+N+L+ Q G K+AD G AKR + + GTP YLAP
Sbjct: 157 LHSLDLIYRDLKPENLLI--DQQG--YIKVADFGFAKRVKGRTW-----XLCGTPEYLAP 207
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E ++ D WALG ++ EM +G + + I + I+ + PS S
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE--KIVSGK---VRFPSHFS 262
Query: 248 KEARDFLR 255
+ +D LR
Sbjct: 263 SDLKDLLR 270
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 107/248 (43%), Gaps = 24/248 (9%)
Query: 10 RGRVIGQGSFGCVFIAKPKS--NSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
R + +G GSFG V + K K N + L EK + +N PF+
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFL 103
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ E + +N + +++EY AGG + + + E R + I+ +
Sbjct: 104 VKL---EFSFKDNSNLY--MVMEYVAGGEMFSHLRRIGR--FXEPHARFYAAQIVLTFEY 156
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H ++ D+KP+N+L+ Q G ++ D G AKR + + GTP YLAP
Sbjct: 157 LHSLDLIYRDLKPENLLI--DQQG--YIQVTDFGFAKRVKGRTW-----XLCGTPEYLAP 207
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E ++ D WALG ++ EM +G + + I + I+ + PS S
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE--KIVSGK---VRFPSHFS 262
Query: 248 KEARDFLR 255
+ +D LR
Sbjct: 263 SDLKDLLR 270
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 107/248 (43%), Gaps = 24/248 (9%)
Query: 10 RGRVIGQGSFGCVFIAKPKS--NSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
R + +G GSFG V + K K N + L EK + +N PF+
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFL 103
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ E + +N + +++EY AGG + + + E R + I+ +
Sbjct: 104 VKL---EFSFKDNSNLY--MVMEYVAGGEMFSHLRRIGR--FXEPHARFYAAQIVLTFEY 156
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H ++ D+KP+N+L+ Q G ++ D G AKR + + GTP YLAP
Sbjct: 157 LHSLDLIYRDLKPENLLI--DQQG--YIQVTDFGFAKRVKGRTW-----XLCGTPEYLAP 207
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E ++ D WALG ++ EM +G + + I + I+ + PS S
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE--KIVSGK---VRFPSHFS 262
Query: 248 KEARDFLR 255
+ +D LR
Sbjct: 263 SDLKDLLR 270
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 121/279 (43%), Gaps = 28/279 (10%)
Query: 12 RVIGQGSFGCVFIAKPKSNSSF--LPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLE 69
RV+G+GSFG V +A+ K + L EK + PF+ +
Sbjct: 29 RVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQ 88
Query: 70 CFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIH 129
F + + + ++E+ GG L I+K E R + I+ + +H
Sbjct: 89 LF----CCFQTPDRLF-FVMEFVNGGDLMFHIQK--SRRFDEARARFYAAEIISALMFLH 141
Query: 130 DSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPET 189
D G ++ D+K DN+LL G K+AD G+ K C + GTP Y+APE
Sbjct: 142 DKGIIYRDLKLDNVLL--DHEGH--CKLADFGMCKEGI-CNGVT-TATFCGTPDYIAPE- 194
Query: 190 VVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSK 248
++Q M P+ D WA+G ++ EML G + + + D LF I ++ + P+ + +
Sbjct: 195 ILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE---DDLFEAILNDEVV--YPTWLHE 249
Query: 249 EARDFLRRCFVRKPAFRFTA------EMLLDDPFVKGVD 281
+A L+ + P R + +L PF K +D
Sbjct: 250 DATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEID 288
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 106/248 (42%), Gaps = 24/248 (9%)
Query: 10 RGRVIGQGSFGCVFIAK--PKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
R + IG GSFG V + K N + L EK + +N PF+
Sbjct: 45 RIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFL 103
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ E + +N + +++EY GG + + + E R + I+ +
Sbjct: 104 VKL---EFSFKDNSNLY--MVMEYMPGGDMFSHLRRIGR--FSEPHARFYAAQIVLTFEY 156
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H ++ D+KP+N+L+ Q G K+AD G AKR + + GTP YLAP
Sbjct: 157 LHSLDLIYRDLKPENLLI--DQQG--YIKVADFGFAKRVKGRTW-----XLCGTPEYLAP 207
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E ++ D WALG ++ EM +G + + I + I+ + PS S
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE--KIVSGK---VRFPSHFS 262
Query: 248 KEARDFLR 255
+ +D LR
Sbjct: 263 SDLKDLLR 270
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 107/250 (42%), Gaps = 24/250 (9%)
Query: 10 RGRVIGQGSFGCVFIAKPKS--NSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
R + +G GSFG V + K K N + L EK + +N PF+
Sbjct: 66 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFL 124
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ E + +N + +++EY AGG + + + E R + I+ +
Sbjct: 125 VKL---EFSFKDNSNLY--MVMEYVAGGEMFSHLRRIGR--FXEPHARFYAAQIVLTFEY 177
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H ++ D+KP+N+L+ Q G ++ D G AKR + + GTP YLAP
Sbjct: 178 LHSLDLIYRDLKPENLLI--DQQG--YIQVTDFGFAKRVKGRTW-----XLCGTPEYLAP 228
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E ++ D WALG ++ EM +G + + I + I+ + PS S
Sbjct: 229 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE--KIVSGK---VRFPSHFS 283
Query: 248 KEARDFLRRC 257
+ +D LR
Sbjct: 284 SDLKDLLRNL 293
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 106/248 (42%), Gaps = 24/248 (9%)
Query: 10 RGRVIGQGSFGCVFIAK--PKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
R + IG GSFG V + K N + L EK + +N PF+
Sbjct: 45 RIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFL 103
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ E + +N + +++EY GG + + + E R + I+ +
Sbjct: 104 VKL---EFSFKDNSNLY--MVMEYMPGGDMFSHLRRIGR--FSEPHARFYAAQIVLTFEY 156
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H ++ D+KP+N+L+ Q G K+AD G AKR + + GTP YLAP
Sbjct: 157 LHSLDLIYRDLKPENLLI--DQQG--YIKVADFGFAKRVKGRTW-----XLCGTPEYLAP 207
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E ++ D WALG ++ EM +G + + I + I+ + PS S
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE--KIVSGK---VRFPSHFS 262
Query: 248 KEARDFLR 255
+ +D LR
Sbjct: 263 SDLKDLLR 270
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 23/211 (10%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGL--------------PEKDVRHFTRCILEGIGHIHDSG 132
LL Y++ G L + E +G L E H+ R ILE + + HD+
Sbjct: 93 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN 152
Query: 133 YVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQ 192
+H DVKP +LL + ++ V K+ GVA + + GTP ++APE V +
Sbjct: 153 IIHRDVKPHCVLLASKENSAPV-KLGGFGVAIQL--GESGLVAGGRVGTPHFMAPEVVKR 209
Query: 193 HMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLF-SIIGDEHSL-PEIPSRVSKEA 250
P D+W G ++ +LSG + + ++LF II ++ + P S +S+ A
Sbjct: 210 EPYGKPVDVWGCGVILFILLSGCLPFY----GTKERLFEGIIKGKYKMNPRQWSHISESA 265
Query: 251 RDFLRRCFVRKPAFRFTAEMLLDDPFVKGVD 281
+D +RR + PA R T L+ P++K D
Sbjct: 266 KDLVRRMLMLDPAERITVYEALNHPWLKERD 296
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 9/197 (4%)
Query: 82 EMAYNLLLEYAAGGTL-GDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKP 140
E + L+ + GG L D++ + E D H + ILE I + H +G VH ++KP
Sbjct: 77 ESFHYLVFDLVTGGELFEDIVAR---EFYSEADASHCIQQILESIAYCHSNGIVHRNLKP 133
Query: 141 DNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSD 200
+N+LL + G V K+AD G+A + GTP YL+PE + + P D
Sbjct: 134 ENLLLASKAKGAAV-KLADFGLAIEVNDSEAWH---GFAGTPGYLSPEVLKKDPYSKPVD 189
Query: 201 IWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVR 260
IWA G ++ +L G + ++ + ++ PE + V+ EA+ +
Sbjct: 190 IWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDT-VTPEAKSLIDSMLTV 248
Query: 261 KPAFRFTAEMLLDDPFV 277
P R TA+ L P++
Sbjct: 249 NPKKRITADQALKVPWI 265
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 9/197 (4%)
Query: 82 EMAYNLLLEYAAGGTL-GDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKP 140
E + L+ + GG L D++ + E D H + ILE I + H +G VH ++KP
Sbjct: 76 ESFHYLVFDLVTGGELFEDIVAR---EFYSEADASHCIQQILESIAYCHSNGIVHRNLKP 132
Query: 141 DNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSD 200
+N+LL + G V K+AD G+A + GTP YL+PE + + P D
Sbjct: 133 ENLLLASKAKGAAV-KLADFGLAIEVNDSEAWH---GFAGTPGYLSPEVLKKDPYSKPVD 188
Query: 201 IWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVR 260
IWA G ++ +L G + ++ + ++ PE + V+ EA+ +
Sbjct: 189 IWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDT-VTPEAKSLIDSMLTV 247
Query: 261 KPAFRFTAEMLLDDPFV 277
P R TA+ L P++
Sbjct: 248 NPKKRITADQALKVPWI 264
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 23/211 (10%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGL--------------PEKDVRHFTRCILEGIGHIHDSG 132
LL Y++ G L + E +G L E H+ R ILE + + HD+
Sbjct: 91 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN 150
Query: 133 YVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQ 192
+H DVKP +LL + ++ V K+ GVA + + GTP ++APE V +
Sbjct: 151 IIHRDVKPHCVLLASKENSAPV-KLGGFGVAIQL--GESGLVAGGRVGTPHFMAPEVVKR 207
Query: 193 HMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFS-IIGDEHSL-PEIPSRVSKEA 250
P D+W G ++ +LSG + + ++LF II ++ + P S +S+ A
Sbjct: 208 EPYGKPVDVWGCGVILFILLSGCLPFY----GTKERLFEGIIKGKYKMNPRQWSHISESA 263
Query: 251 RDFLRRCFVRKPAFRFTAEMLLDDPFVKGVD 281
+D +RR + PA R T L+ P++K D
Sbjct: 264 KDLVRRMLMLDPAERITVYEALNHPWLKERD 294
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 100/233 (42%), Gaps = 41/233 (17%)
Query: 86 NLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILL 145
+L+ EY L +L G+PE V+ T L+ + H +H DVKP+NIL+
Sbjct: 78 HLVFEYCDHTVLHELDR--YQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILI 135
Query: 146 VATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWAL 204
V K+ D G A R +D + T Y +PE +V Q P D+WA+
Sbjct: 136 TKHS----VIKLCDFGFA-RLLTGPSDYYDDEV-ATRWYRSPELLVGDTQYGPPVDVWAI 189
Query: 205 GCVVLEMLSGRQAWVVKEDCSIDQLFSI---IGD-------------EHSLPEIPS---- 244
GCV E+LSG W K D +DQL+ I +GD S +IP
Sbjct: 190 GCVFAELLSGVPLWPGKSD--VDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDM 247
Query: 245 --------RVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGVD--EELSRE 287
+S A L+ C P R T E LL P+ + + E+L++E
Sbjct: 248 EPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIREIEDLAKE 300
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 107/248 (43%), Gaps = 24/248 (9%)
Query: 10 RGRVIGQGSFGCVFIAKPKS--NSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
R + +G GSFG V + K K N + L EK + +N PF+
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFL 103
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ E + +N + +++EY AGG + + + E R + I+ +
Sbjct: 104 VKL---EFSFKDNSNLY--MVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEY 156
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H ++ D+KP+N+L+ Q G ++ D G AKR + + GTP YLAP
Sbjct: 157 LHSLDLIYRDLKPENLLI--DQQG--YIQVTDFGFAKRVKGRTW-----XLCGTPEYLAP 207
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E ++ D WALG ++ +M +G + + I + I+ + PS S
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYE--KIVSGK---VRFPSHFS 262
Query: 248 KEARDFLR 255
+ +D LR
Sbjct: 263 SDLKDLLR 270
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 104/229 (45%), Gaps = 20/229 (8%)
Query: 14 IGQGSFGCVFIAKPKSNSSFL-------PPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPF 66
IG G++G V+ A+ + F+ P L + E F++ N
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 67 VLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIG 126
+ C T + E+ L+ E+ L ++K GLP + ++ R L G+
Sbjct: 72 MDVC----ATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLD 126
Query: 127 HIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLA 186
+H + VH D+KP+NIL+ SG V K+AD G+A+ + + DP + T Y A
Sbjct: 127 FLHANCIVHRDLKPENILVT---SGGTV-KLADFGLAR--IYSYQMALDPVV-VTLWYRA 179
Query: 187 PETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDC-SIDQLFSIIG 234
PE ++Q P D+W++GC+ EM + + + + ++F +IG
Sbjct: 180 PEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIG 228
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 107/248 (43%), Gaps = 24/248 (9%)
Query: 10 RGRVIGQGSFGCVFIAKPKS--NSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
R + +G GSFG V + K K N + L EK + +N PF+
Sbjct: 32 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFL 90
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ E + +N + +++EY AGG + + + E R + I+ +
Sbjct: 91 VKL---EFSFKDNSNLY--MVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEY 143
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H ++ D+KP+N+L+ + G ++ D G AKR + + GTP YLAP
Sbjct: 144 LHSLDLIYRDLKPENLLI--DEQG--YIQVTDFGFAKRVKGRTW-----XLCGTPEYLAP 194
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E ++ D WALG ++ EM +G + + I + I+ + PS S
Sbjct: 195 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE--KIVSGK---VRFPSHFS 249
Query: 248 KEARDFLR 255
+ +D LR
Sbjct: 250 SDLKDLLR 257
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 107/248 (43%), Gaps = 24/248 (9%)
Query: 10 RGRVIGQGSFGCVFIAK--PKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
R + +G GSFG V + K N + L EK + +N PF+
Sbjct: 45 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN-FPFL 103
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ E + +N + +++EYA GG + + + E R + I+ +
Sbjct: 104 VKL---EFSFKDNSNLY--MVMEYAPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEY 156
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H ++ D+KP+N+++ Q G K+ D G+AKR + + GTP YLAP
Sbjct: 157 LHSLDLIYRDLKPENLMI--DQQG--YIKVTDFGLAKRVKGRTW-----XLCGTPEYLAP 207
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E ++ D WALG ++ EM +G + + I + I+ + PS S
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE--KIVSGK---VRFPSHFS 262
Query: 248 KEARDFLR 255
+ +D LR
Sbjct: 263 SDLKDLLR 270
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 106/250 (42%), Gaps = 24/250 (9%)
Query: 10 RGRVIGQGSFGCVFIAKPKS--NSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
R + +G GSFG V + K K N + L EK + +N PF+
Sbjct: 38 RIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFL 96
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ E + +N + +++EY GG + + + E R + I+ +
Sbjct: 97 VKL---EFSFKDNSNLY--MVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEY 149
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H ++ D+KP+N+L+ Q G ++ D G AKR + + GTP YLAP
Sbjct: 150 LHSLDLIYRDLKPENLLI--DQQG--YIQVTDFGFAKRVKGRTW-----XLCGTPEYLAP 200
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E ++ D WALG ++ EM +G + + I + I+ + PS S
Sbjct: 201 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE--KIVSGK---VRFPSHFS 255
Query: 248 KEARDFLRRC 257
+ +D LR
Sbjct: 256 SDLKDLLRNL 265
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 84/179 (46%), Gaps = 26/179 (14%)
Query: 115 RHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKF 174
+ + + +LE + IH G VH D+KP N L+V + K+ D G+A + +
Sbjct: 158 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDG-----MLKLIDFGIANQMQPDTTSVV 212
Query: 175 DPSMRGTPLYLAPETV-----------VQHMQEAPSDIWALGCVVLEMLSGRQAW--VVK 221
S GT Y+ PE + + SD+W+LGC++ M G+ + ++
Sbjct: 213 KDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN 272
Query: 222 EDCSIDQLFSIIGDEHSL--PEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVK 278
+ I +L +II H + P+IP K+ +D L+ C R P R + LL P+V+
Sbjct: 273 Q---ISKLHAIIDPNHEIEFPDIP---EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 131/299 (43%), Gaps = 39/299 (13%)
Query: 12 RVIGQGSFGCVFIAKPKSNSSF--LPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLE 69
+VIG+G+FG V + K K+ + L ++E++V +NG +
Sbjct: 80 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVL--VNGDSKWIT 137
Query: 70 CFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIH 129
N L+++Y GG L L+ K + LPE+ R + ++ I +H
Sbjct: 138 TLHYAFQDDNN----LYLVMDYYVGGDLLTLLSKFE-DRLPEEMARFYLAEMVIAIDSVH 192
Query: 130 DSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMR-----GTPLY 184
YVH D+KPDNIL+ +G ++AD G C + D +++ GTP Y
Sbjct: 193 QLHYVHRDIKPDNILM--DMNGHI--RLADFG------SCLKLMEDGTVQSSVAVGTPDY 242
Query: 185 LAPETVVQHMQEAPS------DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHS 238
++PE ++Q M+ D W+LG + EML G + + S+ + + I +
Sbjct: 243 ISPE-ILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE---SLVETYGKIMNHKE 298
Query: 239 LPEIPSR---VSKEARDFLRR--CFVRKPAFRFTAEMLLDDPFVKGVDEELSRELEGDY 292
+ P++ VS+ A+D +RR C + E PF G+D + R E Y
Sbjct: 299 RFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGIDWDNIRNCEAPY 357
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 84/179 (46%), Gaps = 26/179 (14%)
Query: 115 RHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKF 174
+ + + +LE + IH G VH D+KP N L+V + K+ D G+A + +
Sbjct: 111 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDG-----MLKLIDFGIANQMQPDTTSVV 165
Query: 175 DPSMRGTPLYLAPETV-----------VQHMQEAPSDIWALGCVVLEMLSGRQAW--VVK 221
S GT Y+ PE + + SD+W+LGC++ M G+ + ++
Sbjct: 166 KDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN 225
Query: 222 EDCSIDQLFSIIGDEHSL--PEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVK 278
+ I +L +II H + P+IP K+ +D L+ C R P R + LL P+V+
Sbjct: 226 Q---ISKLHAIIDPNHEIEFPDIP---EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 278
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 106/248 (42%), Gaps = 24/248 (9%)
Query: 10 RGRVIGQGSFGCVFIAK--PKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
R + +G GSFG V + K N + L EK + +N PF+
Sbjct: 45 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFL 103
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ E + +N + +++EYA GG + + + E R + I+ +
Sbjct: 104 VKL---EFSFKDNSNLY--MVMEYAPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEY 156
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H ++ D+KP+N+++ Q G K+ D G AKR + + GTP YLAP
Sbjct: 157 LHSLDLIYRDLKPENLMI--DQQG--YIKVTDFGFAKRVKGRTW-----XLCGTPEYLAP 207
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E ++ D WALG ++ EM +G + + I + I+ + PS S
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE--KIVSGK---VRFPSHFS 262
Query: 248 KEARDFLR 255
+ +D LR
Sbjct: 263 SDLKDLLR 270
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 82/177 (46%), Gaps = 22/177 (12%)
Query: 115 RHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKF 174
+ + + +LE + IH G VH D+KP N L+V + K+ D G+A + +
Sbjct: 114 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDG-----MLKLIDFGIANQMQPDTTSVV 168
Query: 175 DPSMRGTPLYLAPETV-----------VQHMQEAPSDIWALGCVVLEMLSGRQAW--VVK 221
S GT Y+ PE + + SD+W+LGC++ M G+ + ++
Sbjct: 169 KDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN 228
Query: 222 EDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVK 278
+ I +L +II H + E P K+ +D L+ C R P R + LL P+V+
Sbjct: 229 Q---ISKLHAIIDPNHEI-EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 281
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 106/248 (42%), Gaps = 24/248 (9%)
Query: 10 RGRVIGQGSFGCVFIAKPKS--NSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
R + +G GSFG V + K K N + L EK + +N PF+
Sbjct: 46 RIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFL 104
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ E + +N + +++EY GG + + + E R + I+ +
Sbjct: 105 VKL---EFSFKDNSNLY--MVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEY 157
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H ++ D+KP+N+L+ Q G ++ D G AKR + + GTP YLAP
Sbjct: 158 LHSLDLIYRDLKPENLLI--DQQG--YIQVTDFGFAKRVKGRTW-----XLCGTPEYLAP 208
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E ++ D WALG ++ EM +G + + I + I+ + PS S
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE--KIVSGK---VRFPSHFS 263
Query: 248 KEARDFLR 255
+ +D LR
Sbjct: 264 SDLKDLLR 271
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 84/179 (46%), Gaps = 26/179 (14%)
Query: 115 RHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKF 174
+ + + +LE + IH G VH D+KP N L+V + K+ D G+A + +
Sbjct: 158 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDG-----MLKLIDFGIANQMQPDTTSVV 212
Query: 175 DPSMRGTPLYLAPETV-----------VQHMQEAPSDIWALGCVVLEMLSGRQAW--VVK 221
S GT Y+ PE + + SD+W+LGC++ M G+ + ++
Sbjct: 213 KDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN 272
Query: 222 EDCSIDQLFSIIGDEHSL--PEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVK 278
+ I +L +II H + P+IP K+ +D L+ C R P R + LL P+V+
Sbjct: 273 Q---ISKLHAIIDPNHEIEFPDIP---EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 106/248 (42%), Gaps = 24/248 (9%)
Query: 10 RGRVIGQGSFGCVFIAKPKS--NSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
R + +G GSFG V + K K N + L EK + +N PF+
Sbjct: 46 RIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFL 104
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ E + +N + +++EY GG + + + E R + I+ +
Sbjct: 105 VKL---EFSFKDNSNLY--MVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEY 157
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H ++ D+KP+N+L+ Q G ++ D G AKR + + GTP YLAP
Sbjct: 158 LHSLDLIYRDLKPENLLI--DQQG--YIQVTDFGFAKRVKGRTW-----XLCGTPEYLAP 208
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E ++ D WALG ++ EM +G + + I + I+ + PS S
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE--KIVSGK---VRFPSHFS 263
Query: 248 KEARDFLR 255
+ +D LR
Sbjct: 264 SDLKDLLR 271
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 106/248 (42%), Gaps = 24/248 (9%)
Query: 10 RGRVIGQGSFGCVFIAK--PKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
R + +G GSFG V + K N + L EK + +N PF+
Sbjct: 45 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFL 103
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ E + +N + +++EY AGG + + + E R + I+ +
Sbjct: 104 VKL---EFSFKDNSNLY--MVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEY 156
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H ++ D+KP+N+L+ Q G ++ D G AKR + + GTP YLAP
Sbjct: 157 LHSLDLIYRDLKPENLLI--DQQG--YIQVTDFGFAKRVKGRTW-----XLCGTPEYLAP 207
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E ++ D WALG ++ EM +G + + I + I+ + PS S
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE--KIVSGK---VRFPSHFS 262
Query: 248 KEARDFLR 255
+ +D LR
Sbjct: 263 SDLKDLLR 270
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 106/248 (42%), Gaps = 24/248 (9%)
Query: 10 RGRVIGQGSFGCVFIAKPKS--NSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
R + +G GSFG V + K K N + L EK + +N PF+
Sbjct: 46 RIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFL 104
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ E + +N + +++EY GG + + + E R + I+ +
Sbjct: 105 VKL---EFSFKDNSNLY--MVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEY 157
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H ++ D+KP+N+L+ Q G ++ D G AKR + + GTP YLAP
Sbjct: 158 LHSLDLIYRDLKPENLLI--DQQG--YIQVTDFGFAKRVKGRTW-----XLCGTPEYLAP 208
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E ++ D WALG ++ EM +G + + I + I+ + PS S
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE--KIVSGK---VRFPSHFS 263
Query: 248 KEARDFLR 255
+ +D LR
Sbjct: 264 SDLKDLLR 271
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 106/250 (42%), Gaps = 24/250 (9%)
Query: 10 RGRVIGQGSFGCVFIAKPKS--NSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
R + +G GSFG V + K K N + L EK + +N PF+
Sbjct: 38 RIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFL 96
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ E + +N + +++EY GG + + + E R + I+ +
Sbjct: 97 VKL---EFSFKDNSNLY--MVMEYVPGGEMFSHLRRIGR--FXEPHARFYAAQIVLTFEY 149
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H ++ D+KP+N+L+ Q G ++ D G AKR + + GTP YLAP
Sbjct: 150 LHSLDLIYRDLKPENLLI--DQQG--YIQVTDFGFAKRVKGRTW-----XLCGTPEYLAP 200
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E ++ D WALG ++ EM +G + + I + I+ + PS S
Sbjct: 201 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE--KIVSGK---VRFPSHFS 255
Query: 248 KEARDFLRRC 257
+ +D LR
Sbjct: 256 SDLKDLLRNL 265
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 84/179 (46%), Gaps = 26/179 (14%)
Query: 115 RHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKF 174
+ + + +LE + IH G VH D+KP N L+V + K+ D G+A + +
Sbjct: 130 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDG-----MLKLIDFGIANQMQPDTTSVV 184
Query: 175 DPSMRGTPLYLAPETV-----------VQHMQEAPSDIWALGCVVLEMLSGRQAW--VVK 221
S GT Y+ PE + + SD+W+LGC++ M G+ + ++
Sbjct: 185 KDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN 244
Query: 222 EDCSIDQLFSIIGDEHSL--PEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVK 278
+ I +L +II H + P+IP K+ +D L+ C R P R + LL P+V+
Sbjct: 245 Q---ISKLHAIIDPNHEIEFPDIP---EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 106/248 (42%), Gaps = 24/248 (9%)
Query: 10 RGRVIGQGSFGCVFIAK--PKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
R + +G GSFG V + K N + L EK + +N PF+
Sbjct: 45 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFL 103
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ E + +N + +++EYA GG + + + E R + I+ +
Sbjct: 104 VKL---EFSFKDNSNLY--MVMEYAPGGEMFSHLRRIGR--FXEPHARFYAAQIVLTFEY 156
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H ++ D+KP+N+++ Q G K+ D G AKR + + GTP YLAP
Sbjct: 157 LHSLDLIYRDLKPENLMI--DQQG--YIKVTDFGFAKRVKGRTW-----XLCGTPEYLAP 207
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E ++ D WALG ++ EM +G + + I + I+ + PS S
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE--KIVSGK---VRFPSHFS 262
Query: 248 KEARDFLR 255
+ +D LR
Sbjct: 263 SDLKDLLR 270
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 106/248 (42%), Gaps = 24/248 (9%)
Query: 10 RGRVIGQGSFGCVFIAKPKS--NSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
R + +G GSFG V + K K N + L EK + +N PF+
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFL 103
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ E + +N + +++EY AGG + + + E R + I+ +
Sbjct: 104 VKL---EFSFKDNSNLY--MVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEY 156
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H ++ D+KP+N+L+ Q G ++ D G AKR + + GTP YLAP
Sbjct: 157 LHSLDLIYRDLKPENLLI--DQQG--YIQVTDFGFAKRVKGRTW-----XLCGTPEYLAP 207
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
++ D WALG ++ EM +G + + I + I+ + PS S
Sbjct: 208 AIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE--KIVSGK---VRFPSHFS 262
Query: 248 KEARDFLR 255
+ +D LR
Sbjct: 263 SDLKDLLR 270
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 84/179 (46%), Gaps = 26/179 (14%)
Query: 115 RHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKF 174
+ + + +LE + IH G VH D+KP N L+V + K+ D G+A + +
Sbjct: 130 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDG-----MLKLIDFGIANQMQPDXXXVV 184
Query: 175 DPSMRGTPLYLAPETV-----------VQHMQEAPSDIWALGCVVLEMLSGRQAW--VVK 221
S GT Y+ PE + + SD+W+LGC++ M G+ + ++
Sbjct: 185 KDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN 244
Query: 222 EDCSIDQLFSIIGDEHSL--PEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVK 278
+ I +L +II H + P+IP K+ +D L+ C R P R + LL P+V+
Sbjct: 245 Q---ISKLHAIIDPNHEIEFPDIP---EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 82/177 (46%), Gaps = 22/177 (12%)
Query: 115 RHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKF 174
+ + + +LE + IH G VH D+KP N L+V + K+ D G+A + +
Sbjct: 110 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDG-----MLKLIDFGIANQMQPDTTSVV 164
Query: 175 DPSMRGTPLYLAPETV-----------VQHMQEAPSDIWALGCVVLEMLSGRQAW--VVK 221
S GT Y+ PE + + SD+W+LGC++ M G+ + ++
Sbjct: 165 KDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN 224
Query: 222 EDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVK 278
+ I +L +II H + E P K+ +D L+ C R P R + LL P+V+
Sbjct: 225 Q---ISKLHAIIDPNHEI-EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 277
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 98/227 (43%), Gaps = 21/227 (9%)
Query: 1 MDSDGTS---WFRGRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEV 57
M S TS W ++GQG+ VF + K + +E EV
Sbjct: 1 MGSQSTSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEV 60
Query: 58 FDNLNGCPFV-LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEK-CNGNGLPEKDVR 115
LN V L EE T L++E+ G+L ++E+ N GLPE +
Sbjct: 61 LKKLNHKNIVKLFAIEEETTTRHK-----VLIMEFCPCGSLYTVLEEPSNAYGLPESEFL 115
Query: 116 HFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFD 175
R ++ G+ H+ ++G VH ++KP NI+ V + G+ V K+ D G A R + +
Sbjct: 116 IVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA---RELEDDEQF 172
Query: 176 PSMRGTPLYLAPETVVQ------HMQE--APSDIWALGCVVLEMLSG 214
S+ GT YL P+ + H ++ A D+W++G +G
Sbjct: 173 VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 91/184 (49%), Gaps = 11/184 (5%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
+++EYA+GG L + I CN E + R F + ++ G+ + H H D+K +N LL
Sbjct: 92 IVMEYASGGELFERI--CNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLD 149
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAP-SDIWALG 205
+ + + KI G +K S + K S GTP Y+APE +++ + +D+W+ G
Sbjct: 150 GSPAPRL--KICAFGYSKSSVLHSQPK---STVGTPAYIAPEVLLKKEYDGKVADVWSCG 204
Query: 206 CVVLEMLSGRQAWVVKEDCS--IDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPA 263
+ ML G + E+ + I+ ++++P+ +S E R + R FV PA
Sbjct: 205 VTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDY-VHISPECRHLISRIFVADPA 263
Query: 264 FRFT 267
R +
Sbjct: 264 KRIS 267
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 101/197 (51%), Gaps = 14/197 (7%)
Query: 85 YNLLLEYAAGGTLGD-LIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNI 143
Y L++E GG L D +I + N E D + +L G+ ++H VH D+KP+N+
Sbjct: 111 YYLVMECYKGGELFDEIIHRMKFN---EVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENL 167
Query: 144 LLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWA 203
LL + + + KI D G++ + K+ K GT Y+APE V++ + D+W+
Sbjct: 168 LLESKEKDALI-KIVDFGLSAVFENQKKMK---ERLGTAYYIAPE-VLRKKYDEKCDVWS 222
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSL--PEIPSRVSKEARDFLRRCFVRK 261
+G ++ +L+G + + D I L + +++ PE + VS+ A+D +++
Sbjct: 223 IGVILFILLAGYPPFGGQTDQEI--LRKVEKGKYTFDSPEWKN-VSEGAKDLIKQMLQFD 279
Query: 262 PAFRFTAEMLLDDPFVK 278
R +A+ L+ P++K
Sbjct: 280 SQRRISAQQALEHPWIK 296
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 106/248 (42%), Gaps = 24/248 (9%)
Query: 10 RGRVIGQGSFGCVFIAKPKS--NSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
R + +G GSFG V + K K N + L EK + +N PF+
Sbjct: 66 RIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFL 124
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ E + +N + +++EY GG + + + E R + I+ +
Sbjct: 125 VKL---EFSFKDNSNLY--MVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEY 177
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H ++ D+KP+N+L+ Q G ++ D G AKR + + GTP YLAP
Sbjct: 178 LHSLDLIYRDLKPENLLI--DQQG--YIQVTDFGFAKRVKGRTW-----XLCGTPEYLAP 228
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E ++ D WALG ++ EM +G + + I + I+ + PS S
Sbjct: 229 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE--KIVSGK---VRFPSHFS 283
Query: 248 KEARDFLR 255
+ +D LR
Sbjct: 284 SDLKDLLR 291
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 101/232 (43%), Gaps = 23/232 (9%)
Query: 52 QKEKEVFDNLNGCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGD-LIEKCNGNGLP 110
++E + + G P ++ I E+ + L+ + G L D L EK L
Sbjct: 147 RRETHILRQVAGHPHIITL----IDSYESSSFMF-LVFDLMRKGELFDYLTEKV---ALS 198
Query: 111 EKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCK 170
EK+ R R +LE + +H + VH D+KP+NILL +++D G S H +
Sbjct: 199 EKETRSIMRSLLEAVSFLHANNIVHRDLKPENILL----DDNMQIRLSDFGF---SCHLE 251
Query: 171 RQKFDPSMRGTPLYLAPETVVQHMQEAPS------DIWALGCVVLEMLSGRQAWVVKEDC 224
+ + GTP YLAPE + M E D+WA G ++ +L+G + +
Sbjct: 252 PGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI 311
Query: 225 SIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPF 276
+ ++ + S PE R S +D + R P R TAE L PF
Sbjct: 312 LMLRMIMEGQYQFSSPEWDDR-SSTVKDLISRLLQVDPEARLTAEQALQHPF 362
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 93/208 (44%), Gaps = 46/208 (22%)
Query: 101 IEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADL 160
++K G E+ +++ +L+G+ +IH +G VH D+KP N L + + KI D
Sbjct: 133 LQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGN--LAVNEDCEL--KILDF 188
Query: 161 GVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQ 216
G+A RH D M G T Y APE ++ M + DIW++GC++ EML+G+
Sbjct: 189 GLA---RHA-----DAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKT 240
Query: 217 AWVVKEDCSIDQLFSII------GDE--------------HSLPEIPS--------RVSK 248
+ K+ +DQL I+ G E SLP+ P R S
Sbjct: 241 LFKGKD--YLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASP 298
Query: 249 EARDFLRRCFVRKPAFRFTAEMLLDDPF 276
+A D L + R TA L PF
Sbjct: 299 QAADLLEKMLELDVDKRLTAAQALTHPF 326
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 93/208 (44%), Gaps = 46/208 (22%)
Query: 101 IEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADL 160
++K G E+ +++ +L+G+ +IH +G VH D+KP N L + + KI D
Sbjct: 115 LQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGN--LAVNEDCEL--KILDF 170
Query: 161 GVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQ 216
G+A RH D M G T Y APE ++ M + DIW++GC++ EML+G+
Sbjct: 171 GLA---RHA-----DAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKT 222
Query: 217 AWVVKEDCSIDQLFSII------GDE--------------HSLPEIPS--------RVSK 248
+ K+ +DQL I+ G E SLP+ P R S
Sbjct: 223 LFKGKD--YLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASP 280
Query: 249 EARDFLRRCFVRKPAFRFTAEMLLDDPF 276
+A D L + R TA L PF
Sbjct: 281 QAADLLEKMLELDVDKRLTAAQALTHPF 308
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 83/170 (48%), Gaps = 11/170 (6%)
Query: 107 NGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRS 166
L E + R++ R I+ G ++H + +H D+K N+ L + KI D G+A +
Sbjct: 116 KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL----NEDLEVKIGDFGLATKV 171
Query: 167 RHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSI 226
+ +K ++ GTP Y+APE + + D+W++GC++ +L G+ + + C
Sbjct: 172 EYDGERK--KTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF--ETSCLK 227
Query: 227 DQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPF 276
+ I +E+S IP ++ A +++ P R T LL+D F
Sbjct: 228 ETYLRIKKNEYS---IPKHINPVAASLIQKMLQTDPTARPTINELLNDEF 274
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 106/248 (42%), Gaps = 24/248 (9%)
Query: 10 RGRVIGQGSFGCVFIAKPKS--NSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
R + +G GSFG V + K K N + L EK + +N PF+
Sbjct: 45 RIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFL 103
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ E + +N + +++EY GG + + + E R + I+ +
Sbjct: 104 VKL---EYSFKDNSNLY--MVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEY 156
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H ++ D+KP+N+L+ Q G ++ D G AKR + + GTP YLAP
Sbjct: 157 LHSLDLIYRDLKPENLLI--DQQG--YIQVTDFGFAKRVKGRTW-----XLCGTPEYLAP 207
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E ++ D WALG ++ EM +G + + I + I+ + PS S
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE--KIVSGK---VRFPSHFS 262
Query: 248 KEARDFLR 255
+ +D LR
Sbjct: 263 SDLKDLLR 270
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 83/170 (48%), Gaps = 11/170 (6%)
Query: 107 NGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRS 166
L E + R++ R I+ G ++H + +H D+K N+ L + KI D G+A +
Sbjct: 112 KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL----NEDLEVKIGDFGLATKV 167
Query: 167 RHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSI 226
+ +K ++ GTP Y+APE + + D+W++GC++ +L G+ + + C
Sbjct: 168 EYDGERK--KTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF--ETSCLK 223
Query: 227 DQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPF 276
+ I +E+S IP ++ A +++ P R T LL+D F
Sbjct: 224 ETYLRIKKNEYS---IPKHINPVAASLIQKMLQTDPTARPTINELLNDEF 270
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 105/248 (42%), Gaps = 24/248 (9%)
Query: 10 RGRVIGQGSFGCVFIAK--PKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
R + +G GSFG V + K N + L EK + +N PF+
Sbjct: 46 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFL 104
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
+ E + +N + +++EYA GG + + + E R + I+ +
Sbjct: 105 TKL---EFSFKDNSNLY--MVMEYAPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEY 157
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H ++ D+KP+N+++ Q G K+ D G AKR + + GTP YLAP
Sbjct: 158 LHSLDLIYRDLKPENLMI--DQQG--YIKVTDFGFAKRVKGRTW-----XLCGTPEYLAP 208
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E ++ D WALG ++ EM +G + + I + I+ + PS S
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE--KIVSGK---VRFPSHFS 263
Query: 248 KEARDFLR 255
+ +D LR
Sbjct: 264 SDLKDLLR 271
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 83/170 (48%), Gaps = 11/170 (6%)
Query: 107 NGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRS 166
L E + R++ R I+ G ++H + +H D+K N+ L + KI D G+A +
Sbjct: 112 KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL----NEDLEVKIGDFGLATKV 167
Query: 167 RHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSI 226
+ +K ++ GTP Y+APE + + D+W++GC++ +L G+ + + C
Sbjct: 168 EYDGERK--KTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF--ETSCLK 223
Query: 227 DQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPF 276
+ I +E+S IP ++ A +++ P R T LL+D F
Sbjct: 224 ETYLRIKKNEYS---IPKHINPVAASLIQKMLQTDPTARPTINELLNDEF 270
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 106/248 (42%), Gaps = 24/248 (9%)
Query: 10 RGRVIGQGSFGCVFIAKPKS--NSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
R + +G GSFG V + K K N + L EK + +N PF+
Sbjct: 45 RIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFL 103
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ E + +N + +++EY GG + + + E R + I+ +
Sbjct: 104 VKL---EYSFKDNSNLY--MVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEY 156
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H ++ D+KP+N+L+ Q G ++ D G AKR + + GTP YLAP
Sbjct: 157 LHSLDLIYRDLKPENLLI--DQQG--YIQVTDFGFAKRVKGRTW-----XLCGTPEYLAP 207
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E ++ D WALG ++ EM +G + + I + I+ + PS S
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE--KIVSGK---VRFPSHFS 262
Query: 248 KEARDFLR 255
+ +D LR
Sbjct: 263 SDLKDLLR 270
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 105/248 (42%), Gaps = 24/248 (9%)
Query: 10 RGRVIGQGSFGCVFIAK--PKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
R + +G GSFG V + K N + L EK + +N PF+
Sbjct: 46 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFL 104
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
+ E + +N + +++EYA GG + + + E R + I+ +
Sbjct: 105 TKL---EFSFKDNSNLY--MVMEYAPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEY 157
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H ++ D+KP+N+++ Q G K+ D G AKR + + GTP YLAP
Sbjct: 158 LHSLDLIYRDLKPENLMI--DQQG--YIKVTDFGFAKRVKGRTW-----XLCGTPEYLAP 208
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E ++ D WALG ++ EM +G + + I + I+ + PS S
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE--KIVSGK---VRFPSHFS 263
Query: 248 KEARDFLR 255
+ +D LR
Sbjct: 264 SDLKDLLR 271
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 100/218 (45%), Gaps = 22/218 (10%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNG------LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKP 140
L+++ +GG++ D+I+ G L E + R +LEG+ ++H +G +H DVK
Sbjct: 90 LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKA 149
Query: 141 DNILLVATQSGKFVAKIADLGVA---KRSRHCKRQKFDPSMRGTPLYLAPETVVQ-HMQE 196
NILL S +IAD GV+ R K + GTP ++APE + Q +
Sbjct: 150 GNILLGEDGS----VQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYD 205
Query: 197 APSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSL------PEIPSRVSKEA 250
+DIW+ G +E+ +G + + + ++ D SL E+ + K
Sbjct: 206 FKADIWSFGITAIELATGAAPYHKYPPMKV-LMLTLQNDPPSLETGVQDKEMLKKYGKSF 264
Query: 251 RDFLRRCFVRKPAFRFT-AEMLLDDPFVKGVDEELSRE 287
R + C + P R T AE+L F K ++E +E
Sbjct: 265 RKMISLCLQKDPEKRPTAAELLRHKFFQKAKNKEFLQE 302
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 106/248 (42%), Gaps = 24/248 (9%)
Query: 10 RGRVIGQGSFGCVFIAKPKS--NSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
R + +G GSFG V + K K N + L EK + +N PF+
Sbjct: 45 RIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFL 103
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ E + +N + +++EY GG + + + E R + I+ +
Sbjct: 104 VKL---EYSFKDNSNLY--MVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEY 156
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H ++ D+KP+N+L+ Q G ++ D G AKR + + GTP YLAP
Sbjct: 157 LHSLDLIYRDLKPENLLI--DQQG--YIQVTDFGFAKRVKGRTW-----XLCGTPEYLAP 207
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E ++ D WALG ++ EM +G + + I + I+ + PS S
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE--KIVSGK---VRFPSHFS 262
Query: 248 KEARDFLR 255
+ +D LR
Sbjct: 263 SDLKDLLR 270
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 105/248 (42%), Gaps = 24/248 (9%)
Query: 10 RGRVIGQGSFGCVFIAK--PKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
R + +G GSFG V + K N + L EK + +N PF+
Sbjct: 46 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFL 104
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
+ E + +N + +++EYA GG + + + E R + I+ +
Sbjct: 105 TKL---EFSFKDNSNLY--MVMEYAPGGEMFSHLRRIGR--FXEPHARFYAAQIVLTFEY 157
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H ++ D+KP+N+++ Q G K+ D G AKR + + GTP YLAP
Sbjct: 158 LHSLDLIYRDLKPENLMI--DQQG--YIKVTDFGFAKRVKGRTW-----XLCGTPEYLAP 208
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E ++ D WALG ++ EM +G + + I + I+ + PS S
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE--KIVSGK---VRFPSHFS 263
Query: 248 KEARDFLR 255
+ +D LR
Sbjct: 264 SDLKDLLR 271
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 107/248 (43%), Gaps = 24/248 (9%)
Query: 10 RGRVIGQGSFGCVFIAK--PKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
R + +G GSFG V + K N + L EK + +N PF+
Sbjct: 45 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN-FPFL 103
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ E + +N + +++EYA GG + + + E R + I+ +
Sbjct: 104 VKL---EFSFKDNSNLY--MVMEYAPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEY 156
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H ++ D+KP+N+++ Q G ++ D G+AKR + + GTP YLAP
Sbjct: 157 LHSLDLIYRDLKPENLMI--DQQG--YIQVTDFGLAKRVKGRTW-----XLCGTPEYLAP 207
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E ++ D WALG ++ EM +G + + I + I+ + PS S
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE--KIVSGK---VRFPSHFS 262
Query: 248 KEARDFLR 255
+ +D LR
Sbjct: 263 SDLKDLLR 270
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 75/150 (50%), Gaps = 13/150 (8%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
+++EY +GG L D I C L EK+ R + IL G+ + H VH D+KP+N+LL
Sbjct: 93 MVMEYVSGGELFDYI--CKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLD 150
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALG 205
A + AKIAD G+ S +F G+P Y APE + + P DIW+ G
Sbjct: 151 AHMN----AKIADFGL---SNMMSDGEFLRXSCGSPNYAAPEVISGRLYAGPEVDIWSSG 203
Query: 206 CVVLEMLSGRQAWVVKEDCSIDQLFSIIGD 235
++ +L G + +D + LF I D
Sbjct: 204 VILYALLCGTLPF---DDDHVPTLFKKICD 230
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 106/248 (42%), Gaps = 24/248 (9%)
Query: 10 RGRVIGQGSFGCVFIAK--PKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
R + +G GSFG V + K N + L EK + +N PF+
Sbjct: 31 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFL 89
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ E + +N + +++EY GG + + + E R + I+ +
Sbjct: 90 VKL---EFSFKDNSNLY--MVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEY 142
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H ++ D+KP+N+L+ Q G ++ D G AKR + ++ GTP YLAP
Sbjct: 143 LHSLDLIYRDLKPENLLI--DQQG--YIQVTDFGFAKRVKGRTW-----TLCGTPEYLAP 193
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E ++ D WALG ++ EM +G + + I + I+ + PS S
Sbjct: 194 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE--KIVSGK---VRFPSHFS 248
Query: 248 KEARDFLR 255
+ +D LR
Sbjct: 249 SDLKDLLR 256
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 106/248 (42%), Gaps = 24/248 (9%)
Query: 10 RGRVIGQGSFGCVFIAK--PKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
R + +G GSFG V + K N + L EK + +N PF+
Sbjct: 46 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFL 104
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ E + +N + +++EY GG + + + E R + I+ +
Sbjct: 105 VKL---EFSFKDNSNLY--MVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEY 157
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H ++ D+KP+N+L+ Q G ++ D G AKR + ++ GTP YLAP
Sbjct: 158 LHSLDLIYRDLKPENLLI--DQQG--YIQVTDFGFAKRVKGRTW-----TLCGTPEYLAP 208
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E ++ D WALG ++ EM +G + + I + I+ + PS S
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE--KIVSGK---VRFPSHFS 263
Query: 248 KEARDFLR 255
+ +D LR
Sbjct: 264 SDLKDLLR 271
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 7/206 (3%)
Query: 79 ENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDV 138
++G+ Y ++ E GG L D I E++ I + + ++H G VH D+
Sbjct: 86 DDGKYVY-VVTELMKGGELLDKI--LRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDL 142
Query: 139 KPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAP 198
KP NIL V +I D G AK+ R P T ++APE + + +A
Sbjct: 143 KPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCY--TANFVAPEVLERQGYDAA 200
Query: 199 SDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGD-EHSLP-EIPSRVSKEARDFLRR 256
DIW+LG ++ ML+G + D + +++ + IG + SL + VS A+D + +
Sbjct: 201 CDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSK 260
Query: 257 CFVRKPAFRFTAEMLLDDPFVKGVDE 282
P R TA ++L P++ D+
Sbjct: 261 MLHVDPHQRLTAALVLRHPWIVHWDQ 286
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 106/248 (42%), Gaps = 24/248 (9%)
Query: 10 RGRVIGQGSFGCVFIAK--PKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
R + +G GSFG V + K N + L EK + +N PF+
Sbjct: 45 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFL 103
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ E + +N + +++EYA GG + + + E R + I+ +
Sbjct: 104 VKL---EFSFKDNSNLY--MVMEYAPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEY 156
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H ++ D+KP+N+++ Q G ++ D G AKR + + GTP YLAP
Sbjct: 157 LHSLDLIYRDLKPENLMI--DQQG--YIQVTDFGFAKRVKGRTW-----XLCGTPEYLAP 207
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E ++ D WALG ++ EM +G + + I + I+ + PS S
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE--KIVSGK---VRFPSHFS 262
Query: 248 KEARDFLR 255
+ +D LR
Sbjct: 263 SDLKDLLR 270
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 112/255 (43%), Gaps = 36/255 (14%)
Query: 12 RVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXX--------LQKEKEVFDNLNG 63
+VIG+GSFG V A + M L+K+ + DN
Sbjct: 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDK--DNTMN 160
Query: 64 CPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILE 123
+LE F T + M + LL L +LI+K G VR F IL+
Sbjct: 161 VIHMLENF----TFRNHICMTFELL-----SMNLYELIKKNKFQGFSLPLVRKFAHSILQ 211
Query: 124 GIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPL 183
+ +H + +HCD+KP+NILL Q G+ K+ D G + C + + +
Sbjct: 212 CLDALHKNRIIHCDLKPENILL--KQQGRSGIKVIDFGSS-----CYEHQRVYTXIQSRF 264
Query: 184 YLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIP 243
Y APE ++ P D+W+LGC++ E+L+G + ED DQL +I L +P
Sbjct: 265 YRAPEVILGARYGMPIDMWSLGCILAELLTG-YPLLPGEDEG-DQLACMI----ELLGMP 318
Query: 244 SR----VSKEARDFL 254
S+ SK A++F+
Sbjct: 319 SQKLLDASKRAKNFV 333
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 21/206 (10%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNG------LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKP 140
L+++ +GG++ D+I+ G L E + R +LEG+ ++H +G +H DVK
Sbjct: 85 LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKA 144
Query: 141 DNILLVATQSGKFVAKIADLGVA---KRSRHCKRQKFDPSMRGTPLYLAPETVVQ-HMQE 196
NILL S +IAD GV+ R K + GTP ++APE + Q +
Sbjct: 145 GNILLGEDGS----VQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYD 200
Query: 197 APSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSL------PEIPSRVSKEA 250
+DIW+ G +E+ +G + + + ++ D SL E+ + K
Sbjct: 201 FKADIWSFGITAIELATGAAPYHKYPPMKV-LMLTLQNDPPSLETGVQDKEMLKKYGKSF 259
Query: 251 RDFLRRCFVRKPAFRFTAEMLLDDPF 276
R + C + P R TA LL F
Sbjct: 260 RKMISLCLQKDPEKRPTAAELLRHKF 285
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 112/255 (43%), Gaps = 36/255 (14%)
Query: 12 RVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXX--------LQKEKEVFDNLNG 63
+VIG+GSFG V A + M L+K+ + DN
Sbjct: 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDK--DNTMN 160
Query: 64 CPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILE 123
+LE F T + M + LL L +LI+K G VR F IL+
Sbjct: 161 VIHMLENF----TFRNHICMTFELL-----SMNLYELIKKNKFQGFSLPLVRKFAHSILQ 211
Query: 124 GIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPL 183
+ +H + +HCD+KP+NILL Q G+ K+ D G + C + + +
Sbjct: 212 CLDALHKNRIIHCDLKPENILL--KQQGRSGIKVIDFGSS-----CYEHQRVYTXIQSRF 264
Query: 184 YLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIP 243
Y APE ++ P D+W+LGC++ E+L+G + ED DQL +I L +P
Sbjct: 265 YRAPEVILGARYGMPIDMWSLGCILAELLTG-YPLLPGEDEG-DQLACMI----ELLGMP 318
Query: 244 SR----VSKEARDFL 254
S+ SK A++F+
Sbjct: 319 SQKLLDASKRAKNFV 333
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 83/179 (46%), Gaps = 26/179 (14%)
Query: 115 RHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKF 174
+ + + +LE + IH G VH D+KP N L+V + K+ D G+A + +
Sbjct: 158 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDG-----MLKLIDFGIANQMQPDTTSVV 212
Query: 175 DPSMRGTPLYLAPETV-----------VQHMQEAPSDIWALGCVVLEMLSGRQAW--VVK 221
S G Y+ PE + + SD+W+LGC++ M G+ + ++
Sbjct: 213 KDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN 272
Query: 222 EDCSIDQLFSIIGDEHSL--PEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVK 278
+ I +L +II H + P+IP K+ +D L+ C R P R + LL P+V+
Sbjct: 273 Q---ISKLHAIIDPNHEIEFPDIP---EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 106/248 (42%), Gaps = 24/248 (9%)
Query: 10 RGRVIGQGSFGCVFIAKPKS--NSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
R + +G GSFG V + K K N + L EK + +N PF+
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFL 103
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ E + +N + +++EY AGG + + + E R + I+ +
Sbjct: 104 VKL---EFSFKDNSNLY--MVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEY 156
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H ++ D+KP+N+L+ Q G ++ D G AKR + + GTP LAP
Sbjct: 157 LHSLDLIYRDLKPENLLI--DQQG--YIQVTDFGFAKRVKGRTW-----XLCGTPEALAP 207
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E ++ D WALG ++ EM +G + + I + I+ + PS S
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE--KIVSGK---VRFPSHFS 262
Query: 248 KEARDFLR 255
+ +D LR
Sbjct: 263 SDLKDLLR 270
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 118/251 (47%), Gaps = 25/251 (9%)
Query: 12 RVIGQGSFGCVFIAKPKSNSSF--LPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLE 69
+VIG+G+FG V + + K++ + L +E+++ N P+V++
Sbjct: 81 KVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN-SPWVVQ 139
Query: 70 CFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIH 129
F ++ + Y +++EY GG DL+ + +PEK + +T ++ + IH
Sbjct: 140 LF----CAFQDDKYLY-MVMEYMPGG---DLVNLMSNYDVPEKWAKFYTAEVVLALDAIH 191
Query: 130 DSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPET 189
G +H DVKPDN+LL + G K+AD G + D ++ GTP Y++PE
Sbjct: 192 SMGLIHRDVKPDNMLL--DKHGHL--KLADFGTCMKMDETGMVHCDTAV-GTPDYISPEV 246
Query: 190 VVQHMQEA----PSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSL--PEIP 243
+ + D W++G + EML G + D + I+ ++SL PE
Sbjct: 247 LKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYA--DSLVGTYSKIMDHKNSLCFPE-D 303
Query: 244 SRVSKEARDFL 254
+ +SK A++ +
Sbjct: 304 AEISKHAKNLI 314
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 95/193 (49%), Gaps = 11/193 (5%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ E+ +GG L + + + N + E + + R + +G+ H+H++ YVH D+KP+NI+
Sbjct: 231 MIYEFMSGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFT 289
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGC 206
+S + K+ D G+ + H ++ GT + APE +D+W++G
Sbjct: 290 TKRSNEL--KLIDFGL---TAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGV 344
Query: 207 VVLEMLSGRQAWVVKEDCSIDQLFSIIG--DEHSLPEIPSRVSKEARDFLRRCFVRKPAF 264
+ +LSG + + D D+ + D + S +S++ +DF+R+ + P
Sbjct: 345 LSYILLSGLSPFGGEND---DETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNT 401
Query: 265 RFTAEMLLDDPFV 277
R T L+ P++
Sbjct: 402 RMTIHQALEHPWL 414
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 11/170 (6%)
Query: 107 NGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRS 166
L E + R++ R I+ G ++H + +H D+K N+ L + KI D G+A +
Sbjct: 110 KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL----NEDLEVKIGDFGLATKV 165
Query: 167 RHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSI 226
+ +K + GTP Y+APE + + D+W++GC++ +L G+ + + C
Sbjct: 166 EYDGERK--KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF--ETSCLK 221
Query: 227 DQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPF 276
+ I +E+S IP ++ A +++ P R T LL+D F
Sbjct: 222 ETYLRIKKNEYS---IPKHINPVAASLIQKMLQTDPTARPTINELLNDEF 268
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 11/170 (6%)
Query: 107 NGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRS 166
L E + R++ R I+ G ++H + +H D+K N+ L + KI D G+A +
Sbjct: 136 KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL----NEDLEVKIGDFGLATKV 191
Query: 167 RHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSI 226
+ +K + GTP Y+APE + + D+W++GC++ +L G+ + + C
Sbjct: 192 EYDGERK--KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF--ETSCLK 247
Query: 227 DQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPF 276
+ I +E+S IP ++ A +++ P R T LL+D F
Sbjct: 248 ETYLRIKKNEYS---IPKHINPVAASLIQKMLQTDPTARPTINELLNDEF 294
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 11/170 (6%)
Query: 107 NGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRS 166
L E + R++ R I+ G ++H + +H D+K N+ L + KI D G+A +
Sbjct: 134 KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL----NEDLEVKIGDFGLATKV 189
Query: 167 RHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSI 226
+ +K + GTP Y+APE + + D+W++GC++ +L G+ + + C
Sbjct: 190 EYDGERK--KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF--ETSCLK 245
Query: 227 DQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPF 276
+ I +E+S IP ++ A +++ P R T LL+D F
Sbjct: 246 ETYLRIKKNEYS---IPKHINPVAASLIQKMLQTDPTARPTINELLNDEF 292
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 90/184 (48%), Gaps = 11/184 (5%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
+++EYA+GG L + I CN E + R F + ++ G+ + H H D+K +N LL
Sbjct: 92 IVMEYASGGELFERI--CNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLD 149
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAP-SDIWALG 205
+ + + KI G +K S + K GTP Y+APE +++ + +D+W+ G
Sbjct: 150 GSPAPRL--KICAFGYSKSSVLHSQPK---DTVGTPAYIAPEVLLKKEYDGKVADVWSCG 204
Query: 206 CVVLEMLSGRQAWVVKEDCS--IDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPA 263
+ ML G + E+ + I+ ++++P+ +S E R + R FV PA
Sbjct: 205 VTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDY-VHISPECRHLISRIFVADPA 263
Query: 264 FRFT 267
R +
Sbjct: 264 KRIS 267
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 105/248 (42%), Gaps = 24/248 (9%)
Query: 10 RGRVIGQGSFGCVFIAK--PKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
R + +G GSFG V + K N + L EK + +N PF+
Sbjct: 45 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFL 103
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ E + +N + +++EY GG + + + E R + I+ +
Sbjct: 104 VKL---EFSFKDNSNLY--MVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEY 156
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H ++ D+KP+N+L+ Q G ++ D G AKR + + GTP YLAP
Sbjct: 157 LHSLDLIYRDLKPENLLI--DQQG--YIQVTDFGFAKRVKGRTW-----XLCGTPEYLAP 207
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E ++ D WALG ++ EM +G + + I + I+ + PS S
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE--KIVSGK---VRFPSHFS 262
Query: 248 KEARDFLR 255
+ +D LR
Sbjct: 263 SDLKDLLR 270
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 105/248 (42%), Gaps = 24/248 (9%)
Query: 10 RGRVIGQGSFGCVFIAK--PKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
R + +G GSFG V + K N + L EK + +N PF+
Sbjct: 45 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFL 103
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ E + +N + +++EY GG + + + E R + I+ +
Sbjct: 104 VKL---EFSFKDNSNLY--MVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEY 156
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H ++ D+KP+N+L+ Q G ++ D G AKR + + GTP YLAP
Sbjct: 157 LHSLDLIYRDLKPENLLI--DQQG--YIQVTDFGFAKRVKGRTW-----XLCGTPEYLAP 207
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E ++ D WALG ++ EM +G + + I + I+ + PS S
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE--KIVSGK---VRFPSHFS 262
Query: 248 KEARDFLR 255
+ +D LR
Sbjct: 263 SDLKDLLR 270
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 103/229 (44%), Gaps = 20/229 (8%)
Query: 14 IGQGSFGCVFIAKPKSNSSFL-------PPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPF 66
IG G++G V+ A+ + F+ P L + E F++ N
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 67 VLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIG 126
+ C T + E+ L+ E+ L ++K GLP + ++ R L G+
Sbjct: 72 MDVC----ATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLD 126
Query: 127 HIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLA 186
+H + VH D+KP+NIL+ SG V K+AD G+A+ + + P + T Y A
Sbjct: 127 FLHANCIVHRDLKPENILVT---SGGTV-KLADFGLAR--IYSYQMALAPVV-VTLWYRA 179
Query: 187 PETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDC-SIDQLFSIIG 234
PE ++Q P D+W++GC+ EM + + + + ++F +IG
Sbjct: 180 PEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIG 228
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 105/248 (42%), Gaps = 24/248 (9%)
Query: 10 RGRVIGQGSFGCVFIAK--PKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
R + +G GSFG V + K N + L EK + +N PF+
Sbjct: 46 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFL 104
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ E + +N + +++EY GG + + + E R + I+ +
Sbjct: 105 VKL---EFSFKDNSNLY--MVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEY 157
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H ++ D+KP+N+L+ Q G ++ D G AKR + + GTP YLAP
Sbjct: 158 LHSLDLIYRDLKPENLLI--DQQG--YIQVTDFGFAKRVKGRTW-----XLCGTPEYLAP 208
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E ++ D WALG ++ EM +G + + I + I+ + PS S
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE--KIVSGK---VRFPSHFS 263
Query: 248 KEARDFLR 255
+ +D LR
Sbjct: 264 SDLKDLLR 271
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 99/202 (49%), Gaps = 13/202 (6%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNG--LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNIL 144
++ E+ +G D+ E+ N + L E+++ + + E + +H H D++P+NI+
Sbjct: 78 MIFEFISGL---DIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENII 134
Query: 145 LVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWAL 204
+S KI + G A++ + + + P Y APE + +D+W+L
Sbjct: 135 YQTRRSSTI--KIIEFGQARQLKPGDNFRL---LFTAPEYYAPEVHQHDVVSTATDMWSL 189
Query: 205 GCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSR-VSKEARDFLRRCFVRKPA 263
G +V +LSG ++ + + I + +I+ E++ E + +S EA DF+ R V++
Sbjct: 190 GTLVYVLLSGINPFLAETNQQIIE--NIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERK 247
Query: 264 FRFTAEMLLDDPFVKGVDEELS 285
R TA L P++K E +S
Sbjct: 248 SRMTASEALQHPWLKQKIERVS 269
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 105/250 (42%), Gaps = 24/250 (9%)
Query: 10 RGRVIGQGSFGCVFIAK--PKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
R + +G GSFG V + K N + L EK + +N PF+
Sbjct: 46 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFL 104
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ E + +N + +++EY GG + + + E R + I+ +
Sbjct: 105 VKL---EFSFKDNSNLY--MVMEYVPGGEMFSHLRRIGR--FXEPHARFYAAQIVLTFEY 157
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H ++ D+KP+N+L+ Q G ++ D G AKR + + GTP YLAP
Sbjct: 158 LHSLDLIYRDLKPENLLI--DQQG--YIQVTDFGFAKRVKGRTW-----XLCGTPEYLAP 208
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E ++ D WALG ++ EM +G + + I + I+ + PS S
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE--KIVSGK---VRFPSHFS 263
Query: 248 KEARDFLRRC 257
+ +D LR
Sbjct: 264 SDLKDLLRNL 273
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 105/248 (42%), Gaps = 24/248 (9%)
Query: 10 RGRVIGQGSFGCVFIAK--PKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
R + +G GSFG V + K N + L EK + +N PF+
Sbjct: 45 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFL 103
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ E + +N + +++EY GG + + + E R + I+ +
Sbjct: 104 VKL---EFSFKDNSNLY--MVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEY 156
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H ++ D+KP+N+L+ Q G ++ D G AKR + + GTP YLAP
Sbjct: 157 LHSLDLIYRDLKPENLLI--DQQG--YIQVTDFGFAKRVKGRTW-----XLCGTPEYLAP 207
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E ++ D WALG ++ EM +G + + I + I+ + PS S
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE--KIVSGK---VRFPSHFS 262
Query: 248 KEARDFLR 255
+ +D LR
Sbjct: 263 SDLKDLLR 270
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 94/227 (41%), Gaps = 21/227 (9%)
Query: 1 MDSDGTS---WFRGRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEV 57
M S TS W ++GQG+ VF + K + +E EV
Sbjct: 1 MGSQSTSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEV 60
Query: 58 FDNLNGCPFV-LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEK-CNGNGLPEKDVR 115
LN V L EE T L++E+ G+L ++E+ N GLPE +
Sbjct: 61 LKKLNHKNIVKLFAIEEETTTRHK-----VLIMEFCPCGSLYTVLEEPSNAYGLPESEFL 115
Query: 116 HFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFD 175
R ++ G+ H+ ++G VH ++KP NI+ V + G+ V K+ D G A R + +
Sbjct: 116 IVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA---RELEDDEQF 172
Query: 176 PSMRGTPLYLAPETVV--------QHMQEAPSDIWALGCVVLEMLSG 214
+ GT YL P+ Q A D+W++G +G
Sbjct: 173 VXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 105/250 (42%), Gaps = 24/250 (9%)
Query: 10 RGRVIGQGSFGCVFIAK--PKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
R + +G GSFG V + K N + L EK + +N PF+
Sbjct: 45 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFL 103
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ E + +N + +++EY GG + + + E R + I+ +
Sbjct: 104 VKL---EFSFKDNSNLY--MVMEYVPGGEMFSHLRRIGR--FXEPHARFYAAQIVLTFEY 156
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H ++ D+KP+N+L+ Q G ++ D G AKR + + GTP YLAP
Sbjct: 157 LHSLDLIYRDLKPENLLI--DQQG--YIQVTDFGFAKRVKGRTW-----XLCGTPEYLAP 207
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E ++ D WALG ++ EM +G + + I + I+ + PS S
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE--KIVSGK---VRFPSHFS 262
Query: 248 KEARDFLRRC 257
+ +D LR
Sbjct: 263 SDLKDLLRNL 272
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 99/201 (49%), Gaps = 13/201 (6%)
Query: 79 ENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDV 138
++ EM ++ E+ +GG L + + + N + E + + R + +G+ H+H++ YVH D+
Sbjct: 119 DDNEMV--MIYEFMSGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHENNYVHLDL 175
Query: 139 KPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAP 198
KP+NI+ +S + K+ D G+ + H ++ GT + APE
Sbjct: 176 KPENIMFTTKRSNEL--KLIDFGL---TAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYY 230
Query: 199 SDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIG--DEHSLPEIPSRVSKEARDFLRR 256
+D+W++G + +LSG + + D D+ + D + S +S++ +DF+R+
Sbjct: 231 TDMWSVGVLSYILLSGLSPFGGEND---DETLRNVKSCDWNMDDSAFSGISEDGKDFIRK 287
Query: 257 CFVRKPAFRFTAEMLLDDPFV 277
+ P R T L+ P++
Sbjct: 288 LLLADPNTRMTIHQALEHPWL 308
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 105/248 (42%), Gaps = 24/248 (9%)
Query: 10 RGRVIGQGSFGCVFIAK--PKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
R + +G GSFG V + K N + L EK + +N PF+
Sbjct: 45 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFL 103
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
++ E + +N + +++EY GG + + + E R + I+ +
Sbjct: 104 VKL---EFSFKDNSNLY--MVMEYVPGGEMFSHLRRIGR--FXEPHARFYAAQIVLTFEY 156
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H ++ D+KP+N+L+ Q G ++ D G AKR + + GTP YLAP
Sbjct: 157 LHSLDLIYRDLKPENLLI--DQQG--YIQVTDFGFAKRVKGRTW-----XLCGTPEYLAP 207
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E ++ D WALG ++ EM +G + + I + I+ + PS S
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE--KIVSGK---VRFPSHFS 262
Query: 248 KEARDFLR 255
+ +D LR
Sbjct: 263 SDLKDLLR 270
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 127/304 (41%), Gaps = 33/304 (10%)
Query: 12 RVIGQGSFGCVFIAKPKSNSSFLP-PLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLEC 70
R +G GSFG V + + + N + ++ ++ + ++ PF++
Sbjct: 12 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRM 71
Query: 71 FGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHD 130
+G T + ++ ++++Y GG L L+ K P + + + + ++H
Sbjct: 72 WG---TFQDAQQIF--MIMDYIEGGELFSLLRKSQR--FPNPVAKFYAAEVCLALEYLHS 124
Query: 131 SGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETV 190
++ D+KP+NILL ++G KI D G AK + GTP Y+APE V
Sbjct: 125 KDIIYRDLKPENILL--DKNGHI--KITDFGFAKYVPDVTY-----XLCGTPDYIAPEVV 175
Query: 191 VQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEA 250
D W+ G ++ EML+G + + ++ I+ E P +++
Sbjct: 176 STKPYNKSIDWWSFGILIYEMLAGYTPFY--DSNTMKTYEKILNAELRFPPF---FNEDV 230
Query: 251 RDFLRRCFVRKPAFRF-----TAEMLLDDPFVKGVDEE--LSRELEGDY----SQGEVTL 299
+D L R R + R E + + P+ K V E LSR +E Y QG+
Sbjct: 231 KDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLLSRNIETPYEPPIQQGQGDT 290
Query: 300 SNAD 303
S D
Sbjct: 291 SQFD 294
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 102/229 (44%), Gaps = 20/229 (8%)
Query: 14 IGQGSFGCVFIAKPKSNSSFL-------PPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPF 66
IG G++G V+ A+ + F+ P L + E F++ N
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 67 VLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIG 126
+ C T + E+ L+ E+ L ++K GLP + ++ R L G+
Sbjct: 72 MDVC----ATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLD 126
Query: 127 HIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLA 186
+H + VH D+KP+NIL+ T G K+AD G+A+ + + P + T Y A
Sbjct: 127 FLHANCIVHRDLKPENILV--TSGG--TVKLADFGLAR--IYSYQMALFPVV-VTLWYRA 179
Query: 187 PETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDC-SIDQLFSIIG 234
PE ++Q P D+W++GC+ EM + + + + ++F +IG
Sbjct: 180 PEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIG 228
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 124/296 (41%), Gaps = 30/296 (10%)
Query: 5 GTSWFRGRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGC 64
G S+F+ R +G G++G V + K K+ S K + DN N
Sbjct: 35 GESYFKVRKLGSGAYGEVLLCKEKNGHS-------EKAIKVIKKSQFDKGRYSDDNKNIE 87
Query: 65 PFVLECFGE--------------EITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLP 110
F E + E + E+ + Y L+ E+ GG L + I N +
Sbjct: 88 KFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFY-LVTEFYEGGELFEQI--INRHKFD 144
Query: 111 EKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCK 170
E D + + IL GI ++H VH D+KP+NILL ++ KI D G++ S K
Sbjct: 145 ECDAANIMKQILSGICYLHKHNIVHRDIKPENILL-ENKNSLLNIKIVDFGLS--SFFSK 201
Query: 171 RQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLF 230
K + GT Y+APE + + E D+W+ G ++ +L G + + D I +
Sbjct: 202 DYKLRDRL-GTAYYIAPEVLKKKYNE-KCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKV 259
Query: 231 SIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGVDEELSR 286
G + +S EA++ ++ R TAE L+ ++K +++
Sbjct: 260 E-KGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINK 314
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 93/207 (44%), Gaps = 19/207 (9%)
Query: 12 RVIGQGSFGCVFIAKPKSNSSF--LPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLE 69
+VIG+GSFG V +A+ K+ F + L + E+ V PF++
Sbjct: 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLV- 102
Query: 70 CFGEEITMGENGEMAYNLLLEYAAGGTLGDLI--EKCNGNGLPEKDVRHFTRCILEGIGH 127
G + ++ + +L+Y GG L + E+C E R + I +G+
Sbjct: 103 --GLHFSFQTADKLYF--VLDYINGGELFYHLQRERC----FLEPRARFYAAEIASALGY 154
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
+H V+ D+KP+NILL G V + D G+ K + + + GTP YLAP
Sbjct: 155 LHSLNIVYRDLKPENILL--DSQGHIV--LTDFGLCKEN--IEHNSTTSTFCGTPEYLAP 208
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSG 214
E + + + D W LG V+ EML G
Sbjct: 209 EVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 113/263 (42%), Gaps = 32/263 (12%)
Query: 12 RVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLN--------- 62
R +G G F V++AK N++ + M + E ++ +N
Sbjct: 25 RKLGWGHFSTVWLAKDMVNNTHVA--MKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDS 82
Query: 63 -GCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCI 121
G +L+ G NG + +++ G L LI+K G+P V+ ++ +
Sbjct: 83 MGANHILKLLDHFNHKGPNG--VHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQL 140
Query: 122 LEGIGHIHDS-GYVHCDVKPDNILL--VATQSGKFVAKIADLGVAKRSRHCKRQKFDPSM 178
L G+ ++H G +H D+KP+N+L+ V + KIADLG A C + +
Sbjct: 141 LLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA-----CWYDEHYTNS 195
Query: 179 RGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAW-------VVKEDCSIDQLFS 231
T Y +PE ++ +DIW+ C++ E+++G + K+D I Q+
Sbjct: 196 IQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIE 255
Query: 232 IIGDEHSLPEIPSRVSKEARDFL 254
++G+ LP R K R F
Sbjct: 256 LLGE---LPSYLLRNGKYTRTFF 275
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 61/119 (51%), Gaps = 7/119 (5%)
Query: 96 TLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVA 155
L +LI+K G VR F IL+ + +H + +HCD+KP+NILL Q G+
Sbjct: 184 NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILL--KQQGRSGI 241
Query: 156 KIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLSG 214
K+ D G + C + + Y APE ++ P D+W+LGC++ E+L+G
Sbjct: 242 KVIDFGSS-----CYEHQRVYXXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 113/263 (42%), Gaps = 32/263 (12%)
Query: 12 RVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLN--------- 62
R +G G F V++AK N++ + M + E ++ +N
Sbjct: 25 RKLGWGHFSTVWLAKDMVNNTHVA--MKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDS 82
Query: 63 -GCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCI 121
G +L+ G NG + +++ G L LI+K G+P V+ ++ +
Sbjct: 83 MGANHILKLLDHFNHKGPNG--VHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQL 140
Query: 122 LEGIGHIHDS-GYVHCDVKPDNILL--VATQSGKFVAKIADLGVAKRSRHCKRQKFDPSM 178
L G+ ++H G +H D+KP+N+L+ V + KIADLG A C + +
Sbjct: 141 LLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA-----CWYDEHYTNS 195
Query: 179 RGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAW-------VVKEDCSIDQLFS 231
T Y +PE ++ +DIW+ C++ E+++G + K+D I Q+
Sbjct: 196 IQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIE 255
Query: 232 IIGDEHSLPEIPSRVSKEARDFL 254
++G+ LP R K R F
Sbjct: 256 LLGE---LPSYLLRNGKYTRTFF 275
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 114/268 (42%), Gaps = 28/268 (10%)
Query: 9 FRGRVIGQGSFG-CVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
+ + +G+GSF C KSN +F ++ QKE G P +
Sbjct: 14 LKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANT-----QKEITALKLCEGHPNI 68
Query: 68 L---ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEG 124
+ E F +++ L++E GG L + I+K E + + R ++
Sbjct: 69 VKLHEVFHDQLHTF--------LVMELLNGGELFERIKK--KKHFSETEASYIMRKLVSA 118
Query: 125 IGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLY 184
+ H+HD G VH D+KP+N LL ++ KI D G A+ + P T Y
Sbjct: 119 VSHMHDVGVVHRDLKPEN-LLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF--TLHY 175
Query: 185 LAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKE-----DCSIDQLFSIIGDEHSL 239
APE + Q+ + D+W+LG ++ MLSG+ + + +++ + I + S
Sbjct: 176 AAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSF 235
Query: 240 P-EIPSRVSKEARDFLRRCFVRKPAFRF 266
E VS+EA+D ++ P R
Sbjct: 236 EGEAWKNVSQEAKDLIQGLLTVDPNKRL 263
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 121/275 (44%), Gaps = 34/275 (12%)
Query: 12 RVIGQGSFGCVFIAKPKSNSSF--LPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLE 69
R IG GSFG V+ A+ NS + + + KE L P ++
Sbjct: 60 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH-PNTIQ 118
Query: 70 ---CFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIG 126
C+ E T L++EY G DL+E + L E ++ T L+G+
Sbjct: 119 YRGCYLREHTAW--------LVMEYCLGSA-SDLLE-VHKKPLQEVEIAAVTHGALQGLA 168
Query: 127 HIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLA 186
++H +H DVK NILL S + K+ D G A S F GTP ++A
Sbjct: 169 YLHSHNMIHRDVKAGNILL----SEPGLVKLGDFGSA--SIMAPANXF----VGTPYWMA 218
Query: 187 PETVV---QHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIP 243
PE ++ + + D+W+LG +E L+ R+ + + ++ L+ I +E P +
Sbjct: 219 PEVILAMDEGQYDGKVDVWSLGITCIE-LAERKPPLFNMN-AMSALYHIAQNES--PALQ 274
Query: 244 S-RVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
S S+ R+F+ C + P R T+E+LL FV
Sbjct: 275 SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV 309
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 123/275 (44%), Gaps = 34/275 (12%)
Query: 12 RVIGQGSFGCVFIAKPKSNSSF--LPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLE 69
R IG GSFG V+ A+ NS + + + KE L P ++
Sbjct: 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH-PNTIQ 79
Query: 70 ---CFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIG 126
C+ E T L++EY G DL+E + L E ++ T L+G+
Sbjct: 80 YRGCYLREHTAW--------LVMEYCLGSA-SDLLE-VHKKPLQEVEIAAVTHGALQGLA 129
Query: 127 HIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLA 186
++H +H DVK NILL ++ G + K+ D G A S F GTP ++A
Sbjct: 130 YLHSHNMIHRDVKAGNILL--SEPG--LVKLGDFGSA--SIMAPANXF----VGTPYWMA 179
Query: 187 PETVV---QHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIP 243
PE ++ + + D+W+LG +E L+ R+ + + ++ L+ I +E P +
Sbjct: 180 PEVILAMDEGQYDGKVDVWSLGITCIE-LAERKPPLFNMN-AMSALYHIAQNES--PALQ 235
Query: 244 S-RVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
S S+ R+F+ C + P R T+E+LL FV
Sbjct: 236 SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV 270
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 102/237 (43%), Gaps = 33/237 (13%)
Query: 14 IGQGSFGCVFIAKPKSNSSFLP----------PLMXXXXXXXXXXXXLQKEKEVFDNLNG 63
IG G++G V+ A+ + F+ L + E F++ N
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNV 76
Query: 64 CPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILE 123
+ C T + E+ L+ E+ L ++K GLP + ++ R L
Sbjct: 77 VRLMDVC----ATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLR 131
Query: 124 GIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPL 183
G+ +H + VH D+KP+NIL+ SG V K+AD G+A+ + M TP+
Sbjct: 132 GLDFLHANCIVHRDLKPENILVT---SGGTV-KLADFGLAR--------IYSYQMALTPV 179
Query: 184 -----YLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDC-SIDQLFSIIG 234
Y APE ++Q P D+W++GC+ EM + + + + ++F +IG
Sbjct: 180 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIG 236
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 97/210 (46%), Gaps = 15/210 (7%)
Query: 79 ENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDV 138
++G+ Y ++ E GG L D I E++ I + + ++H G VH D+
Sbjct: 86 DDGKYVY-VVTELXKGGELLDKI--LRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDL 142
Query: 139 KPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLY----LAPETVVQHM 194
KP NIL V +I D G AK+ R + + TP Y +APE + +
Sbjct: 143 KPSNILYVDESGNPESIRICDFGFAKQLR------AENGLLXTPCYTANFVAPEVLERQG 196
Query: 195 QEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGD-EHSLP-EIPSRVSKEARD 252
+A DIW+LG ++ L+G + D + +++ + IG + SL + VS A+D
Sbjct: 197 YDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKD 256
Query: 253 FLRRCFVRKPAFRFTAEMLLDDPFVKGVDE 282
+ + P R TA ++L P++ D+
Sbjct: 257 LVSKXLHVDPHQRLTAALVLRHPWIVHWDQ 286
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 7/206 (3%)
Query: 79 ENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDV 138
++G+ Y L+ E GG L D I E++ I + + ++H G VH D+
Sbjct: 91 DDGKHVY-LVTELMRGGELLDKI--LRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDL 147
Query: 139 KPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAP 198
KP NIL V +I D G AK+ R P T ++APE + + +
Sbjct: 148 KPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY--TANFVAPEVLKRQGYDEG 205
Query: 199 SDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGD-EHSLPEIP-SRVSKEARDFLRR 256
DIW+LG ++ ML+G + + +++ + IG + +L + VS+ A+D + +
Sbjct: 206 CDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSK 265
Query: 257 CFVRKPAFRFTAEMLLDDPFVKGVDE 282
P R TA+ +L P+V D+
Sbjct: 266 MLHVDPHQRLTAKQVLQHPWVTQKDK 291
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 111/263 (42%), Gaps = 34/263 (12%)
Query: 13 VIGQGSFGCVFIAKPKSNSSF--LPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLE- 69
V+G+GSFG V +A K + L EK V L+ PF+ +
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQL 85
Query: 70 --CFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
CF + + Y ++EY GG L I++ E + I G+
Sbjct: 86 HSCF-------QTVDRLY-FVMEYVNGGDLMYHIQQVGK--FKEPQAVFYAAEISIGLFF 135
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMR----GTPL 183
+H G ++ D+K DN++L + KIAD G+ CK D GTP
Sbjct: 136 LHKRGIIYRDLKLDNVMLDSEGH----IKIADFGM------CKEHMMDGVTTREFCGTPD 185
Query: 184 YLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIP 243
Y+APE + D WA G ++ EML+G+ + +++ D+LF I EH++ P
Sbjct: 186 YIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE---DELFQSIM-EHNV-SYP 240
Query: 244 SRVSKEARDFLRRCFVRKPAFRF 266
+SKEA + + PA R
Sbjct: 241 KSLSKEAVSICKGLMTKHPAKRL 263
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 119/269 (44%), Gaps = 22/269 (8%)
Query: 12 RVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEV-FDNLNGCPFVLEC 70
+ +G+GSFG V +A + + + + E+E+ + L P +++
Sbjct: 19 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 78
Query: 71 FGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHD 130
+ + E+ +++EYA G L D I + + E++ R F + I+ + + H
Sbjct: 79 YD---VIKSKDEII--MVIEYA-GNELFDYI--VQRDKMSEQEARRFFQQIISAVEYCHR 130
Query: 131 SGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETV 190
VH D+KP+N+LL KIAD G+ S F + G+P Y APE +
Sbjct: 131 HKIVHRDLKPENLLL----DEHLNVKIADFGL---SNIMTDGNFLKTSCGSPNYAAPEVI 183
Query: 191 VQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKE 249
+ P D+W+ G ++ ML R + +D SI LF I + + +P +S
Sbjct: 184 SGKLYAGPEVDVWSCGVILYVMLCRRLPF---DDESIPVLFKNISN--GVYTLPKFLSPG 238
Query: 250 ARDFLRRCFVRKPAFRFTAEMLLDDPFVK 278
A ++R + P R + ++ D + K
Sbjct: 239 AAGLIKRMLIVNPLNRISIHEIMQDDWFK 267
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 7/206 (3%)
Query: 79 ENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDV 138
++G+ Y L+ E GG L D I E++ I + + ++H G VH D+
Sbjct: 91 DDGKHVY-LVTELMRGGELLDKI--LRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDL 147
Query: 139 KPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAP 198
KP NIL V +I D G AK+ R P T ++APE + + +
Sbjct: 148 KPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY--TANFVAPEVLKRQGYDEG 205
Query: 199 SDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGD-EHSLPEIP-SRVSKEARDFLRR 256
DIW+LG ++ ML+G + + +++ + IG + +L + VS+ A+D + +
Sbjct: 206 CDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSK 265
Query: 257 CFVRKPAFRFTAEMLLDDPFVKGVDE 282
P R TA+ +L P+V D+
Sbjct: 266 MLHVDPHQRLTAKQVLQHPWVTQKDK 291
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 119/269 (44%), Gaps = 22/269 (8%)
Query: 12 RVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEV-FDNLNGCPFVLEC 70
+ +G+GSFG V +A + + + + E+E+ + L P +++
Sbjct: 20 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 79
Query: 71 FGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHD 130
+ + E+ +++EYA G L D I + + E++ R F + I+ + + H
Sbjct: 80 YD---VIKSKDEII--MVIEYA-GNELFDYI--VQRDKMSEQEARRFFQQIISAVEYCHR 131
Query: 131 SGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETV 190
VH D+KP+N+LL KIAD G+ S F + G+P Y APE +
Sbjct: 132 HKIVHRDLKPENLLL----DEHLNVKIADFGL---SNIMTDGNFLKTSCGSPNYAAPEVI 184
Query: 191 VQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKE 249
+ P D+W+ G ++ ML R + +D SI LF I + + +P +S
Sbjct: 185 SGKLYAGPEVDVWSCGVILYVMLCRRLPF---DDESIPVLFKNISN--GVYTLPKFLSPG 239
Query: 250 ARDFLRRCFVRKPAFRFTAEMLLDDPFVK 278
A ++R + P R + ++ D + K
Sbjct: 240 AAGLIKRMLIVNPLNRISIHEIMQDDWFK 268
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 119/269 (44%), Gaps = 22/269 (8%)
Query: 12 RVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEV-FDNLNGCPFVLEC 70
+ +G+GSFG V +A + + + + E+E+ + L P +++
Sbjct: 14 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 73
Query: 71 FGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHD 130
+ + E+ +++EYA G L D I + + E++ R F + I+ + + H
Sbjct: 74 YD---VIKSKDEII--MVIEYA-GNELFDYI--VQRDKMSEQEARRFFQQIISAVEYCHR 125
Query: 131 SGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETV 190
VH D+KP+N+LL KIAD G+ S F + G+P Y APE +
Sbjct: 126 HKIVHRDLKPENLLL----DEHLNVKIADFGL---SNIMTDGNFLKTSCGSPNYAAPEVI 178
Query: 191 VQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKE 249
+ P D+W+ G ++ ML R + +D SI LF I + + +P +S
Sbjct: 179 SGKLYAGPEVDVWSCGVILYVMLCRRLPF---DDESIPVLFKNISN--GVYTLPKFLSPG 233
Query: 250 ARDFLRRCFVRKPAFRFTAEMLLDDPFVK 278
A ++R + P R + ++ D + K
Sbjct: 234 AAGLIKRMLIVNPLNRISIHEIMQDDWFK 262
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 106/238 (44%), Gaps = 33/238 (13%)
Query: 53 KEKEVFDNLNGCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGD-LIEKCNGNGLPE 111
KE ++ ++G P +++ + T N + L+ + G L D L EK L E
Sbjct: 72 KEVDILRKVSGHPNIIQL---KDTYETN--TFFFLVFDLMKKGELFDYLTEKVT---LSE 123
Query: 112 KDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKR 171
K+ R R +LE I +H VH D+KP+NILL K+ D G + C
Sbjct: 124 KETRKIMRALLEVICALHKLNIVHRDLKPENILL----DDDMNIKLTDFGFS-----C-- 172
Query: 172 QKFDP-----SMRGTPLYLAPETVVQHMQE------APSDIWALGCVVLEMLSGRQAWVV 220
+ DP S+ GTP YLAPE + M + D+W+ G ++ +L+G +
Sbjct: 173 -QLDPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH 231
Query: 221 KEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVK 278
++ + ++ + PE S +D + R V +P R+TAE L PF +
Sbjct: 232 RKQMLMLRMIMSGNYQFGSPEWDD-YSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 288
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 119/269 (44%), Gaps = 22/269 (8%)
Query: 12 RVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEV-FDNLNGCPFVLEC 70
+ +G+GSFG V +A + + + + E+E+ + L P +++
Sbjct: 10 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 69
Query: 71 FGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHD 130
+ + E+ +++EYA G L D I + + E++ R F + I+ + + H
Sbjct: 70 YD---VIKSKDEII--MVIEYA-GNELFDYI--VQRDKMSEQEARRFFQQIISAVEYCHR 121
Query: 131 SGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETV 190
VH D+KP+N+LL KIAD G+ S F + G+P Y APE +
Sbjct: 122 HKIVHRDLKPENLLL----DEHLNVKIADFGL---SNIMTDGNFLKTSCGSPNYAAPEVI 174
Query: 191 VQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKE 249
+ P D+W+ G ++ ML R + +D SI LF I + + +P +S
Sbjct: 175 SGKLYAGPEVDVWSCGVILYVMLCRRLPF---DDESIPVLFKNISN--GVYTLPKFLSPG 229
Query: 250 ARDFLRRCFVRKPAFRFTAEMLLDDPFVK 278
A ++R + P R + ++ D + K
Sbjct: 230 AAGLIKRMLIVNPLNRISIHEIMQDDWFK 258
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 105/238 (44%), Gaps = 33/238 (13%)
Query: 53 KEKEVFDNLNGCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGD-LIEKCNGNGLPE 111
KE ++ ++G P +++ + T N + L+ + G L D L EK L E
Sbjct: 72 KEVDILRKVSGHPNIIQL---KDTYETN--TFFFLVFDLMKKGELFDYLTEKVT---LSE 123
Query: 112 KDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKR 171
K+ R R +LE I +H VH D+KP+NILL K+ D G + C
Sbjct: 124 KETRKIMRALLEVICALHKLNIVHRDLKPENILL----DDDMNIKLTDFGFS-----C-- 172
Query: 172 QKFDPSMR-----GTPLYLAPETVVQHMQE------APSDIWALGCVVLEMLSGRQAWVV 220
+ DP + GTP YLAPE + M + D+W+ G ++ +L+G +
Sbjct: 173 -QLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH 231
Query: 221 KEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVK 278
++ + ++ + PE S +D + R V +P R+TAE L PF +
Sbjct: 232 RKQMLMLRMIMSGNYQFGSPEWDD-YSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 288
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 121/285 (42%), Gaps = 44/285 (15%)
Query: 12 RVIGQGSFGCVFIAKP-KSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLEC 70
+ IG+G+F V +A+ + ++ L +E + LN P +++
Sbjct: 18 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILN-HPNIVKL 76
Query: 71 FGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHD 130
F E+ E L++EYA+GG + D + + EK+ R R I+ + + H
Sbjct: 77 F--EVI---ETEKTLYLIMEYASGGEVFDYL--VAHGRMKEKEARSKFRQIVSAVQYCHQ 129
Query: 131 SGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETV 190
VH D+K +N+LL A + KIAD G + + K D + G+P Y APE
Sbjct: 130 KRIVHRDLKAENLLLDADMN----IKIADFGFS--NEFTVGGKLD-TFCGSPPYAAPELF 182
Query: 191 VQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRV--- 246
+ P D+W+LG ++ ++SG S+ D +L E+ RV
Sbjct: 183 QGKKYDGPEVDVWSLGVILYTLVSG----------------SLPFDGQNLKELRERVLRG 226
Query: 247 --------SKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGVDEE 283
S + + L+R V P R T E ++ D ++ EE
Sbjct: 227 KYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEE 271
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 105/238 (44%), Gaps = 33/238 (13%)
Query: 53 KEKEVFDNLNGCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGD-LIEKCNGNGLPE 111
KE ++ ++G P +++ + T N + L+ + G L D L EK L E
Sbjct: 59 KEVDILRKVSGHPNIIQL---KDTYETN--TFFFLVFDLMKKGELFDYLTEKVT---LSE 110
Query: 112 KDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKR 171
K+ R R +LE I +H VH D+KP+NILL K+ D G + C
Sbjct: 111 KETRKIMRALLEVICALHKLNIVHRDLKPENILL----DDDMNIKLTDFGFS-----C-- 159
Query: 172 QKFDPSMR-----GTPLYLAPETVVQHMQE------APSDIWALGCVVLEMLSGRQAWVV 220
+ DP + GTP YLAPE + M + D+W+ G ++ +L+G +
Sbjct: 160 -QLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH 218
Query: 221 KEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVK 278
++ + ++ + PE S +D + R V +P R+TAE L PF +
Sbjct: 219 RKQMLMLRMIMSGNYQFGSPEWDD-YSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 275
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 80/163 (49%), Gaps = 14/163 (8%)
Query: 85 YNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNIL 144
+ +++EY +GG L D I C + E + R + IL + + H VH D+KP+N+L
Sbjct: 86 FFMVMEYVSGGELFDYI--CKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVL 143
Query: 145 LVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWA 203
L A + AKIAD G+ S +F + G+P Y APE + + P DIW+
Sbjct: 144 LDAHMN----AKIADFGL---SNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWS 196
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQLFSII-GDEHSLPEIPSR 245
G ++ +L G + +D + LF I G +PE +R
Sbjct: 197 CGVILYALLCGTLPF---DDEHVPTLFKKIRGGVFYIPEYLNR 236
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 89/198 (44%), Gaps = 17/198 (8%)
Query: 87 LLLEYAAGGTLGDLIEKCNG--NGLPEKDVRHFTRCILEGIGHIH---DSGY--VHCDVK 139
+++EY GG L +I K L E+ V + + H D G+ +H D+K
Sbjct: 84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLK 143
Query: 140 PDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS 199
P N+ L GK K+ D G+A+ H F + GTP Y++PE + + S
Sbjct: 144 PANVFL----DGKQNVKLGDFGLARILNH--DTSFAKTFVGTPYYMSPEQMNRMSYNEKS 197
Query: 200 DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFV 259
DIW+LGC++ E+ + + S +L I E IP R S E + + R
Sbjct: 198 DIWSLGCLLYELCALMPPFTA---FSQKELAGKI-REGKFRRIPYRYSDELNEIITRMLN 253
Query: 260 RKPAFRFTAEMLLDDPFV 277
K R + E +L++P +
Sbjct: 254 LKDYHRPSVEEILENPLI 271
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 89/198 (44%), Gaps = 17/198 (8%)
Query: 87 LLLEYAAGGTLGDLIEKCNG--NGLPEKDVRHFTRCILEGIGHIH---DSGY--VHCDVK 139
+++EY GG L +I K L E+ V + + H D G+ +H D+K
Sbjct: 84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLK 143
Query: 140 PDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS 199
P N+ L GK K+ D G+A+ H + F GTP Y++PE + + S
Sbjct: 144 PANVFL----DGKQNVKLGDFGLARILNH--DEDFAKEFVGTPYYMSPEQMNRMSYNEKS 197
Query: 200 DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFV 259
DIW+LGC++ E+ + + S +L I E IP R S E + + R
Sbjct: 198 DIWSLGCLLYELCALMPPFTA---FSQKELAGKI-REGKFRRIPYRYSDELNEIITRMLN 253
Query: 260 RKPAFRFTAEMLLDDPFV 277
K R + E +L++P +
Sbjct: 254 LKDYHRPSVEEILENPLI 271
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 89/198 (44%), Gaps = 17/198 (8%)
Query: 87 LLLEYAAGGTLGDLIEKCNG--NGLPEKDVRHFTRCILEGIGHIH---DSGY--VHCDVK 139
+++EY GG L +I K L E+ V + + H D G+ +H D+K
Sbjct: 84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLK 143
Query: 140 PDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS 199
P N+ L GK K+ D G+A+ H F + GTP Y++PE + + S
Sbjct: 144 PANVFL----DGKQNVKLGDFGLARILNH--DTSFAKAFVGTPYYMSPEQMNRMSYNEKS 197
Query: 200 DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFV 259
DIW+LGC++ E+ + + S +L I E IP R S E + + R
Sbjct: 198 DIWSLGCLLYELCALMPPFTA---FSQKELAGKI-REGKFRRIPYRYSDELNEIITRMLN 253
Query: 260 RKPAFRFTAEMLLDDPFV 277
K R + E +L++P +
Sbjct: 254 LKDYHRPSVEEILENPLI 271
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 93/194 (47%), Gaps = 10/194 (5%)
Query: 85 YNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNIL 144
Y L++E GG L D E E D + +L G ++H VH D+KP+N+L
Sbjct: 96 YYLVMEVYRGGELFD--EIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLL 153
Query: 145 LVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWAL 204
L ++S + KI D G++ + K GT Y+APE V++ + D+W+
Sbjct: 154 L-ESKSRDALIKIVDFGLSAHFEVGGKMK---ERLGTAYYIAPE-VLRKKYDEKCDVWSC 208
Query: 205 GCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSL-PEIPSRVSKEARDFLRRCFVRKPA 263
G ++ +L G + + D I L + + S P ++VS EA+ ++ +P+
Sbjct: 209 GVILYILLCGYPPFGGQTDQEI--LKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPS 266
Query: 264 FRFTAEMLLDDPFV 277
R +AE L+ P++
Sbjct: 267 KRISAEEALNHPWI 280
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 129/310 (41%), Gaps = 56/310 (18%)
Query: 14 IGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLECFGE 73
+G G+ G VF K + + + + +E +V N P+++ +G
Sbjct: 76 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN-SPYIVGFYGA 134
Query: 74 EITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGY 133
+ GE ++ +E+ GG+L +++K +PE+ + + +++G+ ++ +
Sbjct: 135 FYSDGE-----ISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREKHK 187
Query: 134 V-HCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQ 192
+ H DVKP NIL+ + + K+ D GV+ + F GT Y++PE +
Sbjct: 188 IMHRDVKPSNILV----NSRGEIKLCDFGVSGQLIDSMANSF----VGTRSYMSPERLQG 239
Query: 193 HMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLF--SIIGDEHSL----------- 239
SDIW++G ++EM GR + ++ +F + GD
Sbjct: 240 THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPL 299
Query: 240 -------------------------PEIPSRV-SKEARDFLRRCFVRKPAFRFTAEMLLD 273
P++PS V S E +DF+ +C ++ PA R + L+
Sbjct: 300 SSYGMDSRPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLMV 359
Query: 274 DPFVKGVDEE 283
F+K D E
Sbjct: 360 HAFIKRSDAE 369
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 99/232 (42%), Gaps = 14/232 (6%)
Query: 52 QKEKEVFDNLNGCPFVLECFGEEITMGEN---GEMAYNLLLEYAAGGTLGDLIEKCNGNG 108
++E E+ + CP ++ + + EN G +++E GG L I+
Sbjct: 56 RREVELHWRASQCPHIVRI----VDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA 111
Query: 109 LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
E++ + I E I ++H H DVKP+N LL ++ + K+ D G AK +
Sbjct: 112 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETT- 169
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSID- 227
+P TP Y+APE + + D+W+LG ++ +L G + +I
Sbjct: 170 SHNSLTEPCY--TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP 227
Query: 228 -QLFSIIGDEHSLPEIP-SRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
I ++ P S VS+E + +R +P R T ++ P++
Sbjct: 228 GMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 279
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 130/306 (42%), Gaps = 68/306 (22%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLEC 70
G+ IG GSFG V+ K + + ++ + P L+
Sbjct: 29 GQRIGSGSFGTVYKGKWHGDVAV----------------------KMLNVTAPTPQQLQA 66
Query: 71 FGEEI-TMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPE-----------KDVRHFT 118
F E+ + + + L + Y+ L + + C G+ L K +
Sbjct: 67 FKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIA 126
Query: 119 RCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVA-KRSRHCKRQKFDPS 177
R G+ ++H +H D+K +NI L + KI D G+A ++SR +F+
Sbjct: 127 RQTARGMDYLHAKSIIHRDLKSNNIFLHEDNT----VKIGDFGLATEKSRWSGSHQFE-Q 181
Query: 178 MRGTPLYLAPETVVQHMQEA-----PSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSI 232
+ G+ L++APE + MQ++ SD++A G V+ E+++G+ + + DQ+ +
Sbjct: 182 LSGSILWMAPEVI--RMQDSNPYSFQSDVYAFGIVLYELMTGQLPY--SNINNRDQIIEM 237
Query: 233 IGDEHSLPEI-------PSRVSKEARDFLRRCFVRKPAF-RFTAEMLLDDPFVKGVDEEL 284
+G P++ P R+ + + L++ +P+F R AE+ EEL
Sbjct: 238 VGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEI-----------EEL 286
Query: 285 SRELEG 290
+REL G
Sbjct: 287 ARELSG 292
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 120/285 (42%), Gaps = 44/285 (15%)
Query: 12 RVIGQGSFGCVFIAKP-KSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLEC 70
+ IG+G+F V +A+ + ++ L +E + LN P +++
Sbjct: 21 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNH-PNIVKL 79
Query: 71 FGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHD 130
F E+ E L++EYA+GG + D + + EK+ R R I+ + + H
Sbjct: 80 F--EVI---ETEKTLYLIMEYASGGEVFDYL--VAHGRMKEKEARSKFRQIVSAVQYCHQ 132
Query: 131 SGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETV 190
VH D+K +N+LL A + KIAD G + + K D + G P Y APE
Sbjct: 133 KRIVHRDLKAENLLLDADMN----IKIADFGFS--NEFTVGGKLD-AFCGAPPYAAPELF 185
Query: 191 VQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRV--- 246
+ P D+W+LG ++ ++SG S+ D +L E+ RV
Sbjct: 186 QGKKYDGPEVDVWSLGVILYTLVSG----------------SLPFDGQNLKELRERVLRG 229
Query: 247 --------SKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGVDEE 283
S + + L+R V P R T E ++ D ++ EE
Sbjct: 230 KYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEE 274
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 93/194 (47%), Gaps = 10/194 (5%)
Query: 85 YNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNIL 144
Y L++E GG L D E E D + +L G ++H VH D+KP+N+L
Sbjct: 79 YYLVMEVYRGGELFD--EIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLL 136
Query: 145 LVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWAL 204
L ++S + KI D G++ + K GT Y+APE V++ + D+W+
Sbjct: 137 L-ESKSRDALIKIVDFGLSAHFEVGGKMK---ERLGTAYYIAPE-VLRKKYDEKCDVWSC 191
Query: 205 GCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSL-PEIPSRVSKEARDFLRRCFVRKPA 263
G ++ +L G + + D I L + + S P ++VS EA+ ++ +P+
Sbjct: 192 GVILYILLCGYPPFGGQTDQEI--LKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPS 249
Query: 264 FRFTAEMLLDDPFV 277
R +AE L+ P++
Sbjct: 250 KRISAEEALNHPWI 263
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 99/232 (42%), Gaps = 19/232 (8%)
Query: 6 TSWFRGRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCP 65
S+ +VIG GSFG V+ AK + + +E ++ L+ C
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKVLQDKRFKNRELQIMRKLDHCN 74
Query: 66 FV-LECFGEEITMGENGEMAY-NLLLEYAAGGTLGDLIEKCNG-NGLPEKDVRHFTRCIL 122
V L F + GE ++ Y NL+L+Y LP V+ + +
Sbjct: 75 IVRLRYFF--YSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 123 EGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTP 182
+ +IH G H D+KP N+LL + V K+ D G AK+ R + + S +
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTA---VLKLCDFGSAKQ---LVRGEPNVSXICSR 186
Query: 183 LYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSII 233
Y APE + S D+W+ GCV+ E+L G+ + D +DQL II
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP--IFPGDSGVDQLVEII 236
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 96/230 (41%), Gaps = 15/230 (6%)
Query: 6 TSWFRGRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCP 65
S+ +VIG GSFG V+ AK + + +E ++ L+ C
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKVLQGKAFKNRELQIMRKLDHCN 74
Query: 66 FVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNG-NGLPEKDVRHFTRCILEG 124
V + + + E+ NL+L+Y LP V+ + +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 125 IGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLY 184
+ +IH G H D+KP N+LL + V K+ D G AK+ R + + S + Y
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTA---VLKLCDFGSAKQ---LVRGEPNVSXICSRYY 188
Query: 185 LAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSII 233
APE + S D+W+ GCV+ E+L G+ + D +DQL II
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQP--IFPGDSGVDQLVEII 236
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 129/306 (42%), Gaps = 68/306 (22%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLEC 70
G+ IG GSFG V+ K + + ++ + P L+
Sbjct: 17 GQRIGSGSFGTVYKGKWHGDVAV----------------------KMLNVTAPTPQQLQA 54
Query: 71 FGEEI-TMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPE-----------KDVRHFT 118
F E+ + + + L + Y+ L + + C G+ L K +
Sbjct: 55 FKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIA 114
Query: 119 RCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAK-RSRHCKRQKFDPS 177
R G+ ++H +H D+K +NI L + KI D G+A +SR +F+
Sbjct: 115 RQTARGMDYLHAKSIIHRDLKSNNIFLHEDNT----VKIGDFGLATVKSRWSGSHQFE-Q 169
Query: 178 MRGTPLYLAPETVVQHMQEA-----PSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSI 232
+ G+ L++APE + MQ++ SD++A G V+ E+++G+ + + DQ+ +
Sbjct: 170 LSGSILWMAPEVI--RMQDSNPYSFQSDVYAFGIVLYELMTGQLPY--SNINNRDQIIEM 225
Query: 233 IGDEHSLPEI-------PSRVSKEARDFLRRCFVRKPAF-RFTAEMLLDDPFVKGVDEEL 284
+G P++ P R+ + + L++ +P+F R AE+ EEL
Sbjct: 226 VGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEI-----------EEL 274
Query: 285 SRELEG 290
+REL G
Sbjct: 275 ARELSG 280
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 129/310 (41%), Gaps = 56/310 (18%)
Query: 14 IGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLECFGE 73
+G G+ G VF K + + + + +E +V N P+++ +G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN-SPYIVGFYGA 72
Query: 74 EITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGY 133
+ GE ++ +E+ GG+L +++K +PE+ + + +++G+ ++ +
Sbjct: 73 FYSDGE-----ISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREKHK 125
Query: 134 V-HCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQ 192
+ H DVKP NIL+ + + K+ D GV+ + F GT Y++PE +
Sbjct: 126 IMHRDVKPSNILV----NSRGEIKLCDFGVSGQLIDSMANSF----VGTRSYMSPERLQG 177
Query: 193 HMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLF--SIIGDEHSL----------- 239
SDIW++G ++EM GR + ++ +F + GD
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPL 237
Query: 240 -------------------------PEIPSRV-SKEARDFLRRCFVRKPAFRFTAEMLLD 273
P++PS V S E +DF+ +C ++ PA R + L+
Sbjct: 238 SSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 297
Query: 274 DPFVKGVDEE 283
F+K D E
Sbjct: 298 HAFIKRSDAE 307
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 129/310 (41%), Gaps = 56/310 (18%)
Query: 14 IGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLECFGE 73
+G G+ G VF K + + + + +E +V N P+++ +G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN-SPYIVGFYGA 72
Query: 74 EITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGY 133
+ GE ++ +E+ GG+L +++K +PE+ + + +++G+ ++ +
Sbjct: 73 FYSDGE-----ISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREKHK 125
Query: 134 V-HCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQ 192
+ H DVKP NIL+ + + K+ D GV+ + F GT Y++PE +
Sbjct: 126 IMHRDVKPSNILV----NSRGEIKLCDFGVSGQLIDSMANSF----VGTRSYMSPERLQG 177
Query: 193 HMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLF--SIIGDEHSL----------- 239
SDIW++G ++EM GR + ++ +F + GD
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPL 237
Query: 240 -------------------------PEIPSRV-SKEARDFLRRCFVRKPAFRFTAEMLLD 273
P++PS V S E +DF+ +C ++ PA R + L+
Sbjct: 238 SSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 297
Query: 274 DPFVKGVDEE 283
F+K D E
Sbjct: 298 HAFIKRSDAE 307
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 98/232 (42%), Gaps = 14/232 (6%)
Query: 52 QKEKEVFDNLNGCPFVLECFGEEITMGEN---GEMAYNLLLEYAAGGTLGDLIEKCNGNG 108
++E E+ + CP ++ + + EN G +++E GG L I+
Sbjct: 72 RREVELHWRASQCPHIVRI----VDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA 127
Query: 109 LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
E++ + I E I ++H H DVKP+N LL ++ + K+ D G AK +
Sbjct: 128 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETT- 185
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSID- 227
P TP Y+APE + + D+W+LG ++ +L G + +I
Sbjct: 186 SHNSLTTPCY--TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP 243
Query: 228 -QLFSIIGDEHSLPEIP-SRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
I ++ P S VS+E + +R +P R T ++ P++
Sbjct: 244 GMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 295
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 79/163 (48%), Gaps = 14/163 (8%)
Query: 85 YNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNIL 144
+ +++EY +GG L D I C + E + R + IL + + H VH D+KP+N+L
Sbjct: 86 FFMVMEYVSGGELFDYI--CKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVL 143
Query: 145 LVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWA 203
L A + AKIAD G+ S +F G+P Y APE + + P DIW+
Sbjct: 144 LDAHMN----AKIADFGL---SNMMSDGEFLRDSCGSPNYAAPEVISGRLYAGPEVDIWS 196
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQLFSII-GDEHSLPEIPSR 245
G ++ +L G + +D + LF I G +PE +R
Sbjct: 197 CGVILYALLCGTLPF---DDEHVPTLFKKIRGGVFYIPEYLNR 236
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 98/232 (42%), Gaps = 14/232 (6%)
Query: 52 QKEKEVFDNLNGCPFVLECFGEEITMGEN---GEMAYNLLLEYAAGGTLGDLIEKCNGNG 108
++E E+ + CP ++ + + EN G +++E GG L I+
Sbjct: 64 RREVELHWRASQCPHIVRI----VDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA 119
Query: 109 LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
E++ + I E I ++H H DVKP+N LL ++ + K+ D G AK +
Sbjct: 120 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETT- 177
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSID- 227
P TP Y+APE + + D+W+LG ++ +L G + +I
Sbjct: 178 SHNSLTTPCY--TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP 235
Query: 228 -QLFSIIGDEHSLPEIP-SRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
I ++ P S VS+E + +R +P R T ++ P++
Sbjct: 236 GMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 287
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 129/310 (41%), Gaps = 56/310 (18%)
Query: 14 IGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLECFGE 73
+G G+ G VF K + + + + +E +V N P+++ +G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN-SPYIVGFYGA 72
Query: 74 EITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGY 133
+ GE ++ +E+ GG+L +++K +PE+ + + +++G+ ++ +
Sbjct: 73 FYSDGE-----ISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREKHK 125
Query: 134 V-HCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQ 192
+ H DVKP NIL+ + + K+ D GV+ + F GT Y++PE +
Sbjct: 126 IMHRDVKPSNILV----NSRGEIKLCDFGVSGQLIDSMANSF----VGTRSYMSPERLQG 177
Query: 193 HMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLF--SIIGDEHSL----------- 239
SDIW++G ++EM GR + ++ +F + GD
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPL 237
Query: 240 -------------------------PEIPSRV-SKEARDFLRRCFVRKPAFRFTAEMLLD 273
P++PS V S E +DF+ +C ++ PA R + L+
Sbjct: 238 SSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 297
Query: 274 DPFVKGVDEE 283
F+K D E
Sbjct: 298 HAFIKRSDAE 307
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 129/310 (41%), Gaps = 56/310 (18%)
Query: 14 IGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLECFGE 73
+G G+ G VF K + + + + +E +V N P+++ +G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN-SPYIVGFYGA 72
Query: 74 EITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGY 133
+ GE ++ +E+ GG+L +++K +PE+ + + +++G+ ++ +
Sbjct: 73 FYSDGE-----ISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREKHK 125
Query: 134 V-HCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQ 192
+ H DVKP NIL+ + + K+ D GV+ + F GT Y++PE +
Sbjct: 126 IMHRDVKPSNILV----NSRGEIKLCDFGVSGQLIDSMANSF----VGTRSYMSPERLQG 177
Query: 193 HMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLF--SIIGDEHSL----------- 239
SDIW++G ++EM GR + ++ +F + GD
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPL 237
Query: 240 -------------------------PEIPSRV-SKEARDFLRRCFVRKPAFRFTAEMLLD 273
P++PS V S E +DF+ +C ++ PA R + L+
Sbjct: 238 SSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 297
Query: 274 DPFVKGVDEE 283
F+K D E
Sbjct: 298 HAFIKRSDAE 307
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 86/188 (45%), Gaps = 20/188 (10%)
Query: 99 DLIEKCNGNG-LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKI 157
DL + G L E R F ++ I H H G VH D+K +NIL+ + AK+
Sbjct: 125 DLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRG---CAKL 181
Query: 158 ADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEA-PSDIWALGCVVLEMLSGRQ 216
D G FD GT +Y PE + +H A P+ +W+LG ++ +M+ G
Sbjct: 182 IDFGSGALLHDEPYTDFD----GTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCG-- 235
Query: 217 AWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPF 276
D ++ I+ E P+ VS + +RRC KP+ R + E +L DP+
Sbjct: 236 ------DIPFERDQEILEAEL---HFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPW 286
Query: 277 VKGVDEEL 284
++ E++
Sbjct: 287 MQTPAEDV 294
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 98/232 (42%), Gaps = 14/232 (6%)
Query: 52 QKEKEVFDNLNGCPFVLECFGEEITMGEN---GEMAYNLLLEYAAGGTLGDLIEKCNGNG 108
++E E+ + CP ++ + + EN G +++E GG L I+
Sbjct: 57 RREVELHWRASQCPHIVRI----VDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA 112
Query: 109 LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
E++ + I E I ++H H DVKP+N LL ++ + K+ D G AK +
Sbjct: 113 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETT- 170
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSID- 227
P TP Y+APE + + D+W+LG ++ +L G + +I
Sbjct: 171 SHNSLTTPCY--TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP 228
Query: 228 -QLFSIIGDEHSLPEIP-SRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
I ++ P S VS+E + +R +P R T ++ P++
Sbjct: 229 GMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 280
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 98/232 (42%), Gaps = 14/232 (6%)
Query: 52 QKEKEVFDNLNGCPFVLECFGEEITMGEN---GEMAYNLLLEYAAGGTLGDLIEKCNGNG 108
++E E+ + CP ++ + + EN G +++E GG L I+
Sbjct: 63 RREVELHWRASQCPHIVRI----VDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA 118
Query: 109 LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
E++ + I E I ++H H DVKP+N LL ++ + K+ D G AK +
Sbjct: 119 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETT- 176
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSID- 227
P TP Y+APE + + D+W+LG ++ +L G + +I
Sbjct: 177 SHNSLTTPCY--TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP 234
Query: 228 -QLFSIIGDEHSLPEIP-SRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
I ++ P S VS+E + +R +P R T ++ P++
Sbjct: 235 GMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 286
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 87/211 (41%), Gaps = 40/211 (18%)
Query: 99 DLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIA 158
DL L E+ R F +L G+ +IH + +H D+KP N+ + + V KI
Sbjct: 107 DLANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFI---NTEDLVLKIG 163
Query: 159 DLGVAK-------RSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEM 211
D G+A+ H R L L+P + + D+WA GC+ EM
Sbjct: 164 DFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAI-----DMWAAGCIFAEM 218
Query: 212 LSGR----------QAWVVKEDCSI------DQLFSII--------GDEHS-LPEIPSRV 246
L+G+ Q ++ E + +L S+I + H L ++ +
Sbjct: 219 LTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGI 278
Query: 247 SKEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
S+EA DFL + P R TAE L P++
Sbjct: 279 SREAVDFLEQILTFSPMDRLTAEEALSHPYM 309
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 93/209 (44%), Gaps = 25/209 (11%)
Query: 84 AYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNI 143
A L+L GG L I G PE + I G+ +H V+ D+KP+NI
Sbjct: 258 ALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENI 317
Query: 144 LLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWA 203
LL G +I+DLG+A H + GT Y+APE V D WA
Sbjct: 318 LL--DDHGHI--RISDLGLAV---HVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWA 370
Query: 204 LGCVVLEMLSG------RQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRC 257
LGC++ EM++G R+ + +E+ +++L + +E+S R S +AR +
Sbjct: 371 LGCLLYEMIAGQSPFQQRKKKIKREE--VERLVKEVPEEYS-----ERFSPQARSLCSQL 423
Query: 258 FVRKPAFRF-----TAEMLLDDPFVKGVD 281
+ PA R +A + + P K ++
Sbjct: 424 LCKDPAERLGCRGGSAREVKEHPLFKKLN 452
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 98/232 (42%), Gaps = 14/232 (6%)
Query: 52 QKEKEVFDNLNGCPFVLECFGEEITMGEN---GEMAYNLLLEYAAGGTLGDLIEKCNGNG 108
++E E+ + CP ++ + + EN G +++E GG L I+
Sbjct: 56 RREVELHWRASQCPHIVRI----VDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA 111
Query: 109 LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
E++ + I E I ++H H DVKP+N LL ++ + K+ D G AK +
Sbjct: 112 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETT- 169
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSID- 227
P TP Y+APE + + D+W+LG ++ +L G + +I
Sbjct: 170 SHNSLTTPCY--TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP 227
Query: 228 -QLFSIIGDEHSLPEIP-SRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
I ++ P S VS+E + +R +P R T ++ P++
Sbjct: 228 GMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 279
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 98/232 (42%), Gaps = 14/232 (6%)
Query: 52 QKEKEVFDNLNGCPFVLECFGEEITMGEN---GEMAYNLLLEYAAGGTLGDLIEKCNGNG 108
++E E+ + CP ++ + + EN G +++E GG L I+
Sbjct: 62 RREVELHWRASQCPHIVRI----VDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA 117
Query: 109 LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
E++ + I E I ++H H DVKP+N LL ++ + K+ D G AK +
Sbjct: 118 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETT- 175
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSID- 227
P TP Y+APE + + D+W+LG ++ +L G + +I
Sbjct: 176 SHNSLTTPCY--TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP 233
Query: 228 -QLFSIIGDEHSLPEIP-SRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
I ++ P S VS+E + +R +P R T ++ P++
Sbjct: 234 GMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 285
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 129/310 (41%), Gaps = 56/310 (18%)
Query: 14 IGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLECFGE 73
+G G+ G VF K + + + + +E +V N P+++ +G
Sbjct: 41 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN-SPYIVGFYGA 99
Query: 74 EITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGY 133
+ GE ++ +E+ GG+L +++K +PE+ + + +++G+ ++ +
Sbjct: 100 FYSDGE-----ISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREKHK 152
Query: 134 V-HCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQ 192
+ H DVKP NIL+ + + K+ D GV+ + F GT Y++PE +
Sbjct: 153 IMHRDVKPSNILV----NSRGEIKLCDFGVSGQLIDSMANSF----VGTRSYMSPERLQG 204
Query: 193 HMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLF--SIIGDEHSL----------- 239
SDIW++G ++EM GR + ++ +F + GD
Sbjct: 205 THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPL 264
Query: 240 -------------------------PEIPSRV-SKEARDFLRRCFVRKPAFRFTAEMLLD 273
P++PS V S E +DF+ +C ++ PA R + L+
Sbjct: 265 NKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 324
Query: 274 DPFVKGVDEE 283
F+K D E
Sbjct: 325 HAFIKRSDAE 334
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 95/229 (41%), Gaps = 15/229 (6%)
Query: 7 SWFRGRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPF 66
S+ +VIG GSFG V+ AK + + +E ++ L+ C
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELV-----AIKKVLQDKRFKNRELQIMRKLDHCNI 109
Query: 67 VLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNG-NGLPEKDVRHFTRCILEGI 125
V + + + E+ NL+L+Y LP V+ + + +
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 169
Query: 126 GHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYL 185
+IH G H D+KP N+LL V K+ D G AK+ R + + S + Y
Sbjct: 170 AYIHSFGICHRDIKPQNLLL---DPDTAVLKLCDFGSAKQ---LVRGEPNVSYICSRYYR 223
Query: 186 APETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSII 233
APE + S D+W+ GCV+ E+L G+ + D +DQL II
Sbjct: 224 APELIFGATDYTSSIDVWSAGCVLAELLLGQP--IFPGDSGVDQLVEII 270
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 95/229 (41%), Gaps = 15/229 (6%)
Query: 7 SWFRGRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPF 66
S+ +VIG GSFG V+ AK + + +E ++ L+ C
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELV-----AIKKVLQDKRFKNRELQIMRKLDHCNI 88
Query: 67 VLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNG-NGLPEKDVRHFTRCILEGI 125
V + + + E+ NL+L+Y LP V+ + + +
Sbjct: 89 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 148
Query: 126 GHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYL 185
+IH G H D+KP N+LL V K+ D G AK+ R + + S + Y
Sbjct: 149 AYIHSFGICHRDIKPQNLLL---DPDTAVLKLCDFGSAKQ---LVRGEPNVSYICSRYYR 202
Query: 186 APETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSII 233
APE + S D+W+ GCV+ E+L G+ + D +DQL II
Sbjct: 203 APELIFGATDYTSSIDVWSAGCVLAELLLGQP--IFPGDSGVDQLVEII 249
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 95/229 (41%), Gaps = 15/229 (6%)
Query: 7 SWFRGRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPF 66
S+ +VIG GSFG V+ AK + + +E ++ L+ C
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELV-----AIKKVLQDKRFKNRELQIMRKLDHCNI 80
Query: 67 VLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNG-NGLPEKDVRHFTRCILEGI 125
V + + + E+ NL+L+Y LP V+ + + +
Sbjct: 81 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 140
Query: 126 GHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYL 185
+IH G H D+KP N+LL V K+ D G AK+ R + + S + Y
Sbjct: 141 AYIHSFGICHRDIKPQNLLL---DPDTAVLKLCDFGSAKQ---LVRGEPNVSYICSRYYR 194
Query: 186 APETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSII 233
APE + S D+W+ GCV+ E+L G+ + D +DQL II
Sbjct: 195 APELIFGATDYTSSIDVWSAGCVLAELLLGQP--IFPGDSGVDQLVEII 241
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 96/230 (41%), Gaps = 15/230 (6%)
Query: 6 TSWFRGRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCP 65
S+ +VIG GSFG V+ AK + + +E ++ L+ C
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKVLQDKRFKNRELQIMRKLDHCN 74
Query: 66 FVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNG-NGLPEKDVRHFTRCILEG 124
V + + + E+ NL+L+Y LP V+ + +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 125 IGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLY 184
+ +IH G H D+KP N+LL + V K+ D G AK+ R + + S + Y
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTA---VLKLCDFGSAKQ---LVRGEPNVSYICSRYY 188
Query: 185 LAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSII 233
APE + S D+W+ GCV+ E+L G+ + D +DQL II
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQP--IFPGDSGVDQLVEII 236
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 96/230 (41%), Gaps = 15/230 (6%)
Query: 6 TSWFRGRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCP 65
S+ +VIG GSFG V+ AK + + +E ++ L+ C
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKVLQDKRFKNRELQIMRKLDHCN 74
Query: 66 FVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNG-NGLPEKDVRHFTRCILEG 124
V + + + E+ NL+L+Y LP V+ + +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 125 IGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLY 184
+ +IH G H D+KP N+LL + V K+ D G AK+ R + + S + Y
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTA---VLKLCDFGSAKQ---LVRGEPNVSXICSRYY 188
Query: 185 LAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSII 233
APE + S D+W+ GCV+ E+L G+ + D +DQL II
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQP--IFPGDSGVDQLVEII 236
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 95/229 (41%), Gaps = 15/229 (6%)
Query: 7 SWFRGRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPF 66
S+ +VIG GSFG V+ AK + + +E ++ L+ C
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELV-----AIKKVLQDKRFKNRELQIMRKLDHCNI 103
Query: 67 VLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNG-NGLPEKDVRHFTRCILEGI 125
V + + + E+ NL+L+Y LP V+ + + +
Sbjct: 104 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 163
Query: 126 GHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYL 185
+IH G H D+KP N+LL V K+ D G AK+ R + + S + Y
Sbjct: 164 AYIHSFGICHRDIKPQNLLL---DPDTAVLKLCDFGSAKQ---LVRGEPNVSYICSRYYR 217
Query: 186 APETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSII 233
APE + S D+W+ GCV+ E+L G+ + D +DQL II
Sbjct: 218 APELIFGATDYTSSIDVWSAGCVLAELLLGQP--IFPGDSGVDQLVEII 264
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 96/229 (41%), Gaps = 15/229 (6%)
Query: 7 SWFRGRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPF 66
S+ +VIG GSFG V+ AK + + +E ++ L+ C
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELV-----AIKKVLQDKRFKNRELQIMRKLDHCNI 113
Query: 67 VLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNG-NGLPEKDVRHFTRCILEGI 125
V + + + E+ NL+L+Y LP V+ + + +
Sbjct: 114 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 173
Query: 126 GHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYL 185
+IH G H D+KP N+LL + V K+ D G AK+ R + + S + Y
Sbjct: 174 AYIHSFGICHRDIKPQNLLLDPDTA---VLKLCDFGSAKQ---LVRGEPNVSYICSRYYR 227
Query: 186 APETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSII 233
APE + S D+W+ GCV+ E+L G+ + D +DQL II
Sbjct: 228 APELIFGATDYTSSIDVWSAGCVLAELLLGQP--IFPGDSGVDQLVEII 274
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 95/229 (41%), Gaps = 15/229 (6%)
Query: 7 SWFRGRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPF 66
S+ +VIG GSFG V+ AK + + +E ++ L+ C
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELV-----AIKKVLQDKRFKNRELQIMRKLDHCNI 109
Query: 67 VLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNG-NGLPEKDVRHFTRCILEGI 125
V + + + E+ NL+L+Y LP V+ + + +
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 169
Query: 126 GHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYL 185
+IH G H D+KP N+LL V K+ D G AK+ R + + S + Y
Sbjct: 170 AYIHSFGICHRDIKPQNLLL---DPDTAVLKLCDFGSAKQ---LVRGEPNVSXICSRYYR 223
Query: 186 APETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSII 233
APE + S D+W+ GCV+ E+L G+ + D +DQL II
Sbjct: 224 APELIFGATDYTSSIDVWSAGCVLAELLLGQP--IFPGDSGVDQLVEII 270
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 98/232 (42%), Gaps = 14/232 (6%)
Query: 52 QKEKEVFDNLNGCPFVLECFGEEITMGEN---GEMAYNLLLEYAAGGTLGDLIEKCNGNG 108
++E E+ + CP ++ + + EN G +++E GG L I+
Sbjct: 58 RREVELHWRASQCPHIVRI----VDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA 113
Query: 109 LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
E++ + I E I ++H H DVKP+N LL ++ + K+ D G AK +
Sbjct: 114 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETT- 171
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSID- 227
P TP Y+APE + + D+W+LG ++ +L G + +I
Sbjct: 172 SHNSLTTPCY--TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP 229
Query: 228 -QLFSIIGDEHSLPEIP-SRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
I ++ P S VS+E + +R +P R T ++ P++
Sbjct: 230 GMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 281
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 96/229 (41%), Gaps = 15/229 (6%)
Query: 7 SWFRGRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPF 66
S+ +VIG GSFG V+ AK + + +E ++ L+ C
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELV-----AIKKVLQDKRFKNRELQIMRKLDHCNI 111
Query: 67 VLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNG-NGLPEKDVRHFTRCILEGI 125
V + + + E+ NL+L+Y LP V+ + + +
Sbjct: 112 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 171
Query: 126 GHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYL 185
+IH G H D+KP N+LL + V K+ D G AK+ R + + S + Y
Sbjct: 172 AYIHSFGICHRDIKPQNLLLDPDTA---VLKLCDFGSAKQ---LVRGEPNVSYICSRYYR 225
Query: 186 APETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSII 233
APE + S D+W+ GCV+ E+L G+ + D +DQL II
Sbjct: 226 APELIFGATDYTSSIDVWSAGCVLAELLLGQP--IFPGDSGVDQLVEII 272
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 98/232 (42%), Gaps = 14/232 (6%)
Query: 52 QKEKEVFDNLNGCPFVLECFGEEITMGEN---GEMAYNLLLEYAAGGTLGDLIEKCNGNG 108
++E E+ + CP ++ + + EN G +++E GG L I+
Sbjct: 58 RREVELHWRASQCPHIVRI----VDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA 113
Query: 109 LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
E++ + I E I ++H H DVKP+N LL ++ + K+ D G AK +
Sbjct: 114 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETT- 171
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSID- 227
P TP Y+APE + + D+W+LG ++ +L G + +I
Sbjct: 172 SHNSLTTPCY--TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP 229
Query: 228 -QLFSIIGDEHSLPEIP-SRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
I ++ P S VS+E + +R +P R T ++ P++
Sbjct: 230 GMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 281
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 93/209 (44%), Gaps = 25/209 (11%)
Query: 84 AYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNI 143
A L+L GG L I G PE + I G+ +H V+ D+KP+NI
Sbjct: 258 ALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENI 317
Query: 144 LLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWA 203
LL G +I+DLG+A H + GT Y+APE V D WA
Sbjct: 318 LL--DDHGHI--RISDLGLAV---HVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWA 370
Query: 204 LGCVVLEMLSG------RQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRC 257
LGC++ EM++G R+ + +E+ +++L + +E+S R S +AR +
Sbjct: 371 LGCLLYEMIAGQSPFQQRKKKIKREE--VERLVKEVPEEYS-----ERFSPQARSLCSQL 423
Query: 258 FVRKPAFRF-----TAEMLLDDPFVKGVD 281
+ PA R +A + + P K ++
Sbjct: 424 LCKDPAERLGCRGGSAREVKEHPLFKKLN 452
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 96/230 (41%), Gaps = 15/230 (6%)
Query: 6 TSWFRGRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCP 65
S+ +VIG GSFG V+ AK + + +E ++ L+ C
Sbjct: 21 VSYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKVLQDKRFKNRELQIMRKLDHCN 75
Query: 66 FVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNG-NGLPEKDVRHFTRCILEG 124
V + + + E+ NL+L+Y LP V+ + +
Sbjct: 76 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 135
Query: 125 IGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLY 184
+ +IH G H D+KP N+LL + V K+ D G AK+ R + + S + Y
Sbjct: 136 LAYIHSFGICHRDIKPQNLLLDPDTA---VLKLCDFGSAKQ---LVRGEPNVSXICSRYY 189
Query: 185 LAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSII 233
APE + S D+W+ GCV+ E+L G+ + D +DQL II
Sbjct: 190 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQP--IFPGDSGVDQLVEII 237
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 96/229 (41%), Gaps = 15/229 (6%)
Query: 7 SWFRGRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPF 66
S+ +VIG GSFG V+ AK + + +E ++ L+ C
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKVLQDKRFKNRELQIMRKLDHCNI 87
Query: 67 VLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNG-NGLPEKDVRHFTRCILEGI 125
V + + + E+ NL+L+Y LP V+ + + +
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 147
Query: 126 GHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYL 185
+IH G H D+KP N+LL + V K+ D G AK+ R + + S + Y
Sbjct: 148 AYIHSFGICHRDIKPQNLLLDPDTA---VLKLCDFGSAKQ---LVRGEPNVSXICSRYYR 201
Query: 186 APETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSII 233
APE + S D+W+ GCV+ E+L G+ + D +DQL II
Sbjct: 202 APELIFGATDYTSSIDVWSAGCVLAELLLGQP--IFPGDSGVDQLVEII 248
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 96/230 (41%), Gaps = 15/230 (6%)
Query: 6 TSWFRGRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCP 65
S+ +VIG GSFG V+ AK + + +E ++ L+ C
Sbjct: 24 VSYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKVLQDKRFKNRELQIMRKLDHCN 78
Query: 66 FVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNG-NGLPEKDVRHFTRCILEG 124
V + + + E+ NL+L+Y LP V+ + +
Sbjct: 79 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 138
Query: 125 IGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLY 184
+ +IH G H D+KP N+LL + V K+ D G AK+ R + + S + Y
Sbjct: 139 LAYIHSFGICHRDIKPQNLLLDPDTA---VLKLCDFGSAKQ---LVRGEPNVSXICSRYY 192
Query: 185 LAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSII 233
APE + S D+W+ GCV+ E+L G+ + D +DQL II
Sbjct: 193 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQP--IFPGDSGVDQLVEII 240
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 95/229 (41%), Gaps = 15/229 (6%)
Query: 7 SWFRGRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPF 66
S+ +VIG GSFG V+ AK + + +E ++ L+ C
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELV-----AIKKVLQDKRFKNRELQIMRKLDHCNI 94
Query: 67 VLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNG-NGLPEKDVRHFTRCILEGI 125
V + + + E+ NL+L+Y LP V+ + + +
Sbjct: 95 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 154
Query: 126 GHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYL 185
+IH G H D+KP N+LL V K+ D G AK+ R + + S + Y
Sbjct: 155 AYIHSFGICHRDIKPQNLLL---DPDTAVLKLCDFGSAKQ---LVRGEPNVSXICSRYYR 208
Query: 186 APETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSII 233
APE + S D+W+ GCV+ E+L G+ + D +DQL II
Sbjct: 209 APELIFGATDYTSSIDVWSAGCVLAELLLGQP--IFPGDSGVDQLVEII 255
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 98/232 (42%), Gaps = 14/232 (6%)
Query: 52 QKEKEVFDNLNGCPFVLECFGEEITMGEN---GEMAYNLLLEYAAGGTLGDLIEKCNGNG 108
++E E+ + CP ++ + + EN G +++E GG L I+
Sbjct: 108 RREVELHWRASQCPHIVRI----VDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA 163
Query: 109 LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
E++ + I E I ++H H DVKP+N LL ++ + K+ D G AK +
Sbjct: 164 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETT- 221
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSID- 227
P TP Y+APE + + D+W+LG ++ +L G + +I
Sbjct: 222 SHNSLTTPCY--TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP 279
Query: 228 -QLFSIIGDEHSLPEIP-SRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
I ++ P S VS+E + +R +P R T ++ P++
Sbjct: 280 GMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 331
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 96/230 (41%), Gaps = 15/230 (6%)
Query: 6 TSWFRGRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCP 65
S+ +VIG GSFG V+ AK + + +E ++ L+ C
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKVLQGKAFKNRELQIMRKLDHCN 74
Query: 66 FVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNG-NGLPEKDVRHFTRCILEG 124
V + + + E+ NL+L+Y LP V+ + +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 125 IGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLY 184
+ +IH G H D+KP N+LL + V K+ D G AK+ R + + S + Y
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTA---VLKLCDFGSAKQ---LVRGEPNVSYICSRYY 188
Query: 185 LAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSII 233
APE + S D+W+ GCV+ E+L G+ + D +DQL II
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQP--IFPGDSGVDQLVEII 236
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 95/229 (41%), Gaps = 15/229 (6%)
Query: 7 SWFRGRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPF 66
S+ +VIG GSFG V+ AK + + +E ++ L+ C
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELV-----AIKKVLQDKRFKNRELQIMRKLDHCNI 87
Query: 67 VLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNG-NGLPEKDVRHFTRCILEGI 125
V + + + E+ NL+L+Y LP V+ + + +
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 147
Query: 126 GHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYL 185
+IH G H D+KP N+LL V K+ D G AK+ R + + S + Y
Sbjct: 148 AYIHSFGICHRDIKPQNLLL---DPDTAVLKLCDFGSAKQ---LVRGEPNVSXICSRYYR 201
Query: 186 APETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSII 233
APE + S D+W+ GCV+ E+L G+ + D +DQL II
Sbjct: 202 APELIFGATDYTSSIDVWSAGCVLAELLLGQP--IFPGDSGVDQLVEII 248
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 98/232 (42%), Gaps = 14/232 (6%)
Query: 52 QKEKEVFDNLNGCPFVLECFGEEITMGEN---GEMAYNLLLEYAAGGTLGDLIEKCNGNG 108
++E E+ + CP ++ + + EN G +++E GG L I+
Sbjct: 102 RREVELHWRASQCPHIVRI----VDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA 157
Query: 109 LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
E++ + I E I ++H H DVKP+N LL ++ + K+ D G AK +
Sbjct: 158 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETT- 215
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSID- 227
P TP Y+APE + + D+W+LG ++ +L G + +I
Sbjct: 216 SHNSLTTPCY--TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP 273
Query: 228 -QLFSIIGDEHSLPEIP-SRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
I ++ P S VS+E + +R +P R T ++ P++
Sbjct: 274 GMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 325
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 96/230 (41%), Gaps = 15/230 (6%)
Query: 6 TSWFRGRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCP 65
S+ +VIG GSFG V+ AK + + +E ++ L+ C
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKVLQDKRFKNRELQIMRKLDHCN 74
Query: 66 FVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNG-NGLPEKDVRHFTRCILEG 124
V + + + E+ NL+L+Y LP V+ + +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 125 IGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLY 184
+ +IH G H D+KP N+LL + V K+ D G AK+ R + + S + Y
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTA---VLKLCDFGSAKQ---LVRGEPNVSXICSRYY 188
Query: 185 LAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSII 233
APE + S D+W+ GCV+ E+L G+ + D +DQL II
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQP--IFPGDSGVDQLVEII 236
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 96/230 (41%), Gaps = 15/230 (6%)
Query: 6 TSWFRGRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCP 65
S+ +VIG GSFG V+ AK + + +E ++ L+ C
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKVLQGKAFKNRELQIMRKLDHCN 74
Query: 66 FVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNG-NGLPEKDVRHFTRCILEG 124
V + + + E+ NL+L+Y LP V+ + +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 125 IGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLY 184
+ +IH G H D+KP N+LL + V K+ D G AK+ R + + S + Y
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTA---VLKLCDFGSAKQ---LVRGEPNVSYICSRYY 188
Query: 185 LAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSII 233
APE + S D+W+ GCV+ E+L G+ + D +DQL II
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQP--IFPGDSGVDQLVEII 236
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 96/229 (41%), Gaps = 15/229 (6%)
Query: 7 SWFRGRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPF 66
S+ +VIG GSFG V+ AK + + +E ++ L+ C
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKVLQDKRFKNRELQIMRKLDHCNI 83
Query: 67 VLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNG-NGLPEKDVRHFTRCILEGI 125
V + + + E+ NL+L+Y LP V+ + + +
Sbjct: 84 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 143
Query: 126 GHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYL 185
+IH G H D+KP N+LL + V K+ D G AK+ R + + S + Y
Sbjct: 144 AYIHSFGICHRDIKPQNLLLDPDTA---VLKLCDFGSAKQ---LVRGEPNVSXICSRYYR 197
Query: 186 APETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSII 233
APE + S D+W+ GCV+ E+L G+ + D +DQL II
Sbjct: 198 APELIFGATDYTSSIDVWSAGCVLAELLLGQP--IFPGDSGVDQLVEII 244
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 96/229 (41%), Gaps = 15/229 (6%)
Query: 7 SWFRGRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPF 66
S+ +VIG GSFG V+ AK + + +E ++ L+ C
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELV-----AIKKVLQDKRFKNRELQIMRKLDHCNI 154
Query: 67 VLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNG-NGLPEKDVRHFTRCILEGI 125
V + + + E+ NL+L+Y LP V+ + + +
Sbjct: 155 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 214
Query: 126 GHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYL 185
+IH G H D+KP N+LL + V K+ D G AK+ R + + S + Y
Sbjct: 215 AYIHSFGICHRDIKPQNLLLDPDTA---VLKLCDFGSAKQ---LVRGEPNVSYICSRYYR 268
Query: 186 APETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSII 233
APE + S D+W+ GCV+ E+L G+ + D +DQL II
Sbjct: 269 APELIFGATDYTSSIDVWSAGCVLAELLLGQP--IFPGDSGVDQLVEII 315
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 93/219 (42%), Gaps = 9/219 (4%)
Query: 62 NGCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCI 121
+G P ++ C + +G+ +++E GG L I++ E++ R I
Sbjct: 79 SGGPHIV-CILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDI 137
Query: 122 LEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGT 181
I +H H DVKP+N LL ++ V K+ D G AK + Q P T
Sbjct: 138 GTAIQFLHSHNIAHRDVKPEN-LLYTSKEKDAVLKLTDFGFAKETTQNALQT--PCY--T 192
Query: 182 PLYLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFS--IIGDEHSL 239
P Y+APE + + D+W+LG ++ +L G + +I I ++
Sbjct: 193 PYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGF 252
Query: 240 PEIP-SRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
P S VS++A+ +R P R T ++ P++
Sbjct: 253 PNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWI 291
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 100/238 (42%), Gaps = 16/238 (6%)
Query: 5 GTSWFRGRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGC 64
G + GR IG+GSFG +F N+ + L+ E + L GC
Sbjct: 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQ---QVAIKFEPRRSDAPQLRDEYRTYKLLAGC 65
Query: 65 PFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEG 124
+ + G+ G +N+L+ G +L DL++ C G K V + +L
Sbjct: 66 TGIPNVY----YFGQEG--LHNVLVIDLLGPSLEDLLDLC-GRKFSVKTVAMAAKQMLAR 118
Query: 125 IGHIHDSGYVHCDVKPDNILLVATQSGKF-VAKIADLGVAKRSRHCKRQKFDP-----SM 178
+ IH+ V+ D+KPDN L+ S + + D G+ K R ++ P ++
Sbjct: 119 VQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNL 178
Query: 179 RGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDE 236
GT Y++ T + Q D+ ALG V + L G W + + Q + IG++
Sbjct: 179 SGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEK 236
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 100/238 (42%), Gaps = 16/238 (6%)
Query: 5 GTSWFRGRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGC 64
G + GR IG+GSFG +F N+ + L+ E + L GC
Sbjct: 8 GVHYKVGRRIGEGSFGVIFEGTNLLNNQ---QVAIKFEPRRSDAPQLRDEYRTYKLLAGC 64
Query: 65 PFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEG 124
+ + G+ G +N+L+ G +L DL++ C G K V + +L
Sbjct: 65 TGIPNVY----YFGQEG--LHNVLVIDLLGPSLEDLLDLC-GRKFSVKTVAMAAKQMLAR 117
Query: 125 IGHIHDSGYVHCDVKPDNILLVATQSGKF-VAKIADLGVAKRSRHCKRQKFDP-----SM 178
+ IH+ V+ D+KPDN L+ S + + D G+ K R ++ P ++
Sbjct: 118 VQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNL 177
Query: 179 RGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDE 236
GT Y++ T + Q D+ ALG V + L G W + + Q + IG++
Sbjct: 178 SGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEK 235
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 93/219 (42%), Gaps = 9/219 (4%)
Query: 62 NGCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCI 121
+G P ++ C + +G+ +++E GG L I++ E++ R I
Sbjct: 60 SGGPHIV-CILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDI 118
Query: 122 LEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGT 181
I +H H DVKP+N LL ++ V K+ D G AK + Q P T
Sbjct: 119 GTAIQFLHSHNIAHRDVKPEN-LLYTSKEKDAVLKLTDFGFAKETTQNALQT--PCY--T 173
Query: 182 PLYLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFS--IIGDEHSL 239
P Y+APE + + D+W+LG ++ +L G + +I I ++
Sbjct: 174 PYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGF 233
Query: 240 PEIP-SRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
P S VS++A+ +R P R T ++ P++
Sbjct: 234 PNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWI 272
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 69/137 (50%), Gaps = 8/137 (5%)
Query: 86 NLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILL 145
N+ +E GG+LG LI++ LPE ++ LEG+ ++H +H DVK DN+LL
Sbjct: 140 NIFMELLEGGSLGQLIKQMGC--LPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLL 197
Query: 146 VATQSGKFVAKIADLGVA---KRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIW 202
+ S A + D G A + K + GT ++APE V+ +A DIW
Sbjct: 198 SSDGS---RAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIW 254
Query: 203 ALGCVVLEMLSGRQAWV 219
+ C++L ML+G W
Sbjct: 255 SSCCMMLHMLNGCHPWT 271
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 114/271 (42%), Gaps = 23/271 (8%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSSF--LPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
GR +G+G FG V++A+ K N L L L++E E+ +L P +L
Sbjct: 20 GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH-PNIL 78
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
+ + + Y L+LE+A G L ++K E+ F + + + +
Sbjct: 79 RMY----NYFHDRKRIY-LMLEFAPRGELYKELQK--HGRFDEQRSATFMEELADALHYC 131
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
H+ +H D+KP+N+L+ K KIAD G + + +R+ M GT YL PE
Sbjct: 132 HERKVIHRDIKPENLLM----GYKGELKIADFGWSVHAPSLRRR----XMCGTLDYLPPE 183
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSK 248
+ + D+W G + E L G + + I+ + P +S
Sbjct: 184 MIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHR--RIVNVDLKFPPF---LSD 238
Query: 249 EARDFLRRCFVRKPAFRFTAEMLLDDPFVKG 279
++D + + P R + +++ P+VK
Sbjct: 239 GSKDLISKLLRYHPPQRLPLKGVMEHPWVKA 269
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 108/225 (48%), Gaps = 29/225 (12%)
Query: 64 CPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILE 123
CP++++CFG IT ++ + GT + ++K +PE+ + T I++
Sbjct: 83 CPYIVQCFGTFIT-------NTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVK 135
Query: 124 GIGHIHDS-GYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTP 182
+ ++ + G +H DVKP NILL + G+ K+ D G++ R K + D S G
Sbjct: 136 ALYYLKEKHGVIHRDVKPSNILL--DERGQI--KLCDFGISGRLVDDKAK--DRSA-GCA 188
Query: 183 LYLAPETVVQHMQEAP-----SDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGD-- 235
Y+APE + P +D+W+LG ++E+ +G+ + ++C D F ++
Sbjct: 189 AYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPY---KNCKTD--FEVLTKVL 243
Query: 236 EHSLPEIPSRV--SKEARDFLRRCFVRKPAFRFTAEMLLDDPFVK 278
+ P +P + S + + F++ C + R LL+ F+K
Sbjct: 244 QEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIK 288
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 69/137 (50%), Gaps = 8/137 (5%)
Query: 86 NLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILL 145
N+ +E GG+LG LI++ LPE ++ LEG+ ++H +H DVK DN+LL
Sbjct: 126 NIFMELLEGGSLGQLIKQMGC--LPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLL 183
Query: 146 VATQSGKFVAKIADLGVA---KRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIW 202
+ S A + D G A + K + GT ++APE V+ +A DIW
Sbjct: 184 SSDGS---RAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIW 240
Query: 203 ALGCVVLEMLSGRQAWV 219
+ C++L ML+G W
Sbjct: 241 SSCCMMLHMLNGCHPWT 257
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 114/271 (42%), Gaps = 23/271 (8%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSSF--LPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
GR +G+G FG V++A+ K N L L L++E E+ +L P +L
Sbjct: 19 GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH-PNIL 77
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHI 128
+ + + Y L+LE+A G L ++K E+ F + + + +
Sbjct: 78 RMY----NYFHDRKRIY-LMLEFAPRGELYKELQK--HGRFDEQRSATFMEELADALHYC 130
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
H+ +H D+KP+N+L+ K KIAD G + + +R+ M GT YL PE
Sbjct: 131 HERKVIHRDIKPENLLM----GYKGELKIADFGWSVHAPSLRRR----XMCGTLDYLPPE 182
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSK 248
+ + D+W G + E L G + + I+ + P +S
Sbjct: 183 MIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHR--RIVNVDLKFPPF---LSD 237
Query: 249 EARDFLRRCFVRKPAFRFTAEMLLDDPFVKG 279
++D + + P R + +++ P+VK
Sbjct: 238 GSKDLISKLLRYHPPQRLPLKGVMEHPWVKA 268
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 69/137 (50%), Gaps = 8/137 (5%)
Query: 86 NLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILL 145
N+ +E GG+LG LI++ LPE ++ LEG+ ++H +H DVK DN+LL
Sbjct: 142 NIFMELLEGGSLGQLIKQMGC--LPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLL 199
Query: 146 VATQSGKFVAKIADLGVA---KRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIW 202
+ S A + D G A + K + GT ++APE V+ +A DIW
Sbjct: 200 SSDGS---RAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIW 256
Query: 203 ALGCVVLEMLSGRQAWV 219
+ C++L ML+G W
Sbjct: 257 SSCCMMLHMLNGCHPWT 273
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 93/195 (47%), Gaps = 19/195 (9%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ E+ A G+L D ++ G+ P + F+ I EG+ I Y+H D++ NIL+
Sbjct: 86 IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILV- 144
Query: 147 ATQSGKFVAKIADLGVAK---RSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWA 203
S V KIAD G+A+ + + R+ ++ T APE + SD+W+
Sbjct: 145 ---SASLVCKIADFGLARVIEDNEYTAREGAKFPIKWT----APEAINFGSFTIKSDVWS 197
Query: 204 LGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKP 262
G +++E+++ GR + S ++ + + +P P +E + + RC+ +P
Sbjct: 198 FGILLMEIVTYGR---IPYPGMSNPEVIRALERGYRMPR-PENCPEELYNIMMRCWKNRP 253
Query: 263 AFRFTAEML---LDD 274
R T E + LDD
Sbjct: 254 EERPTFEYIQSVLDD 268
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 76/149 (51%), Gaps = 12/149 (8%)
Query: 81 GEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKP 140
G + Y +++EY G TL D++ G P++ + + + H +G +H DVKP
Sbjct: 88 GPLPY-IVMEYVDGVTLRDIVH-TEGPMTPKRAIEVIADA-CQALNFSHQNGIIHRDVKP 144
Query: 141 DNILLVATQSGKFVAKIADLGVAKR---SRHCKRQKFDPSMRGTPLYLAPETVVQHMQEA 197
NIL+ AT + K+ D G+A+ S + Q ++ GT YL+PE +A
Sbjct: 145 ANILISATNA----VKVVDFGIARAIADSGNSVXQTA--AVIGTAQYLSPEQARGDSVDA 198
Query: 198 PSDIWALGCVVLEMLSGRQAWVVKEDCSI 226
SD+++LGCV+ E+L+G + S+
Sbjct: 199 RSDVYSLGCVLYEVLTGEPPFTGDSPVSV 227
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 98/219 (44%), Gaps = 27/219 (12%)
Query: 85 YNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNIL 144
+ L+ E GG++ I+K E++ R + + +H G H D+KP+NIL
Sbjct: 86 FYLVFEKLQGGSILAHIQK--QKHFNEREASRVVRDVAAALDFLHTKGIAHRDLKPENIL 143
Query: 145 LVATQSGKFVAKIA--DLGVAKRSRHCKRQKFDPSMR---GTPLYLAPETVVQHMQEAP- 198
+ + V KI DLG + + P + G+ Y+APE V +A
Sbjct: 144 CESPEKVSPV-KICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATF 202
Query: 199 ----SDIWALGCVVLEMLSGRQAWV--VKEDCSID----------QLF-SIIGDEHSLPE 241
D+W+LG V+ MLSG +V DC D +LF SI ++ P+
Sbjct: 203 YDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPD 262
Query: 242 IP-SRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKG 279
+ +S EA+D + + VR R +A +L P+V+G
Sbjct: 263 KDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQG 301
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 126/293 (43%), Gaps = 46/293 (15%)
Query: 12 RVIGQGSFGCVFIAKP-KSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLEC 70
+ IG+G+F V +A+ + ++ L +E + LN P +++
Sbjct: 13 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNH-PNIVKL 71
Query: 71 FGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHD 130
F E+ E L++EYA+GG + D + + EK+ R R I+ + + H
Sbjct: 72 F--EVI---ETEKTLYLVMEYASGGEVFDYL--VAHGWMKEKEARAKFRQIVSAVQYCHQ 124
Query: 131 SGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETV 190
VH D+K +N+LL A + KIAD G + + K D + G+P Y APE
Sbjct: 125 KFIVHRDLKAENLLLDADMN----IKIADFGFS--NEFTFGNKLD-TFCGSPPYAAPELF 177
Query: 191 VQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRV--- 246
+ P D+W+LG ++ ++SG S+ D +L E+ RV
Sbjct: 178 QGKKYDGPEVDVWSLGVILYTLVSG----------------SLPFDGQNLKELRERVLRG 221
Query: 247 --------SKEARDFLRRCFVRKPAFRFTAEMLLDDPF--VKGVDEELSRELE 289
S + + L++ + P+ R T E ++ D + V D+EL +E
Sbjct: 222 KYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVE 274
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 22/195 (11%)
Query: 86 NLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILL 145
N+ +E GG+LG L+++ LPE ++ LEG+ ++H +H DVK DN+LL
Sbjct: 161 NIFMELLEGGSLGQLVKE--QGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLL 218
Query: 146 VATQSGKFVAKIADLGVA---KRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIW 202
+ S A + D G A + K + GT ++APE V+ +A D+W
Sbjct: 219 SSDGSH---AALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVW 275
Query: 203 ALGCVVLEMLSGRQAWVVKEDCSIDQLF------SIIGDEHSLPEIPSRVSKEARDFLRR 256
+ C++L ML+G W Q F I + + EIP + ++
Sbjct: 276 SSCCMMLHMLNGCHPWT--------QFFRGPLCLKIASEPPPVREIPPSCAPLTAQAIQE 327
Query: 257 CFVRKPAFRFTAEML 271
++P R +A L
Sbjct: 328 GLRKEPIHRVSAAEL 342
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 86/210 (40%), Gaps = 36/210 (17%)
Query: 99 DLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIA 158
DL + L + +F IL G+ +IH + +H D+KP N+L+ T KI
Sbjct: 131 DLYKLLKSQQLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCD----LKIC 186
Query: 159 DLGVAKRSR-HCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQ 216
D G+A+ + F T Y APE ++ S DIW++GC++ EMLS R
Sbjct: 187 DFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 246
Query: 217 AWVVKEDCSIDQLFSIIG-----------------DEHSLPEIPSRVS-----------K 248
+ K +DQL I+G + L +PS+
Sbjct: 247 IFPGKH--YLDQLNHILGILGSPSQEDLNCIINMKARNYLQSLPSKTKVAWAKLFPKSDS 304
Query: 249 EARDFLRRCFVRKPAFRFTAEMLLDDPFVK 278
+A D L R P R T E L P+++
Sbjct: 305 KALDLLDRMLTFNPNKRITVEEALAHPYLE 334
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 118/276 (42%), Gaps = 44/276 (15%)
Query: 12 RVIGQGSFGCVFIAKP-KSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLEC 70
+ IG+G+F V +A+ + ++ L +E + LN P +++
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLN-HPNIVKL 78
Query: 71 FGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHD 130
F E+ E L++EYA+GG + D + + EK+ R R I+ + + H
Sbjct: 79 F--EVI---ETEKTLYLVMEYASGGEVFDYL--VAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 131 SGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETV 190
VH D+K +N+LL A + KIAD G + + K D + G+P Y APE
Sbjct: 132 KFIVHRDLKAENLLLDADMN----IKIADFGFS--NEFTFGNKLD-TFCGSPPYAAPELF 184
Query: 191 VQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRV--- 246
+ P D+W+LG ++ ++SG S+ D +L E+ RV
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSG----------------SLPFDGQNLKELRERVLRG 228
Query: 247 --------SKEARDFLRRCFVRKPAFRFTAEMLLDD 274
S + + L++ + P+ R T E ++ D
Sbjct: 229 KYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIMKD 264
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 126/293 (43%), Gaps = 46/293 (15%)
Query: 12 RVIGQGSFGCVFIAKP-KSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLEC 70
+ IG+G+F V +A+ + ++ L +E + LN P +++
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLN-HPNIVKL 78
Query: 71 FGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHD 130
F E+ E L++EYA+GG + D + + EK+ R R I+ + + H
Sbjct: 79 F--EVI---ETEKTLYLVMEYASGGEVFDYL--VAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 131 SGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETV 190
VH D+K +N+LL A + KIAD G + + K D + G+P Y APE
Sbjct: 132 KFIVHRDLKAENLLLDADMN----IKIADFGFS--NEFTFGNKLD-TFCGSPPYAAPELF 184
Query: 191 VQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRV--- 246
+ P D+W+LG ++ ++SG S+ D +L E+ RV
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSG----------------SLPFDGQNLKELRERVLRG 228
Query: 247 --------SKEARDFLRRCFVRKPAFRFTAEMLLDDPF--VKGVDEELSRELE 289
S + + L++ + P+ R T E ++ D + V D+EL +E
Sbjct: 229 KYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVE 281
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 94/195 (48%), Gaps = 19/195 (9%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ E+ A G+L D ++ G+ P + F+ I EG+ I Y+H D++ NIL+
Sbjct: 259 IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVS 318
Query: 147 ATQSGKFVAKIADLGVAK---RSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWA 203
A+ V KIAD G+A+ + + R+ ++ T APE + SD+W+
Sbjct: 319 AS----LVCKIADFGLARVIEDNEYTAREGAKFPIKWT----APEAINFGSFTIKSDVWS 370
Query: 204 LGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKP 262
G +++E+++ GR + S ++ + + +P P +E + + RC+ +P
Sbjct: 371 FGILLMEIVTYGR---IPYPGMSNPEVIRALERGYRMPR-PENCPEELYNIMMRCWKNRP 426
Query: 263 AFRFTAEML---LDD 274
R T E + LDD
Sbjct: 427 EERPTFEYIQSVLDD 441
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 66/139 (47%), Gaps = 8/139 (5%)
Query: 98 GDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKI 157
DL + L + +F IL G+ +IH + +H D+KP N+LL T KI
Sbjct: 130 ADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD----LKI 185
Query: 158 ADLGVAKRSR-HCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGR 215
D G+A+ + F T Y APE ++ S DIW++GC++ EMLS R
Sbjct: 186 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
Query: 216 QAWVVKEDCSIDQLFSIIG 234
+ K +DQL I+G
Sbjct: 246 PIFPGKH--YLDQLNHILG 262
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 88/168 (52%), Gaps = 23/168 (13%)
Query: 94 GGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKF 153
G LG L++ L E ++ +L+G+ +IH +G +H D+KP N L + +
Sbjct: 113 GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGN--LAVNEDCEL 167
Query: 154 VAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWALGCVVL 209
KI D G+A+++ D M G T Y APE ++ M+ + DIW++GC++
Sbjct: 168 --KILDFGLARQA--------DSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMA 217
Query: 210 EMLSGRQAWVVKEDCSIDQLFSIIGDEHSLP-EIPSRV-SKEARDFLR 255
EM++G+ + K +DQL I+ + P E R+ S EA+++++
Sbjct: 218 EMITGKT--LFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMK 263
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 8/138 (5%)
Query: 99 DLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIA 158
DL + L + +F IL G+ +IH + +H D+KP N+LL T KI
Sbjct: 113 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSD----LKIC 168
Query: 159 DLGVAKRSR-HCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQ 216
D G+A+ + F T Y APE ++ S DIW++GC++ EMLS R
Sbjct: 169 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 228
Query: 217 AWVVKEDCSIDQLFSIIG 234
+ K +DQL I+G
Sbjct: 229 IFPGKH--YLDQLNHILG 244
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 8/138 (5%)
Query: 99 DLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIA 158
DL + L + +F IL G+ +IH + +H D+KP N+LL T KI
Sbjct: 111 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD----LKIX 166
Query: 159 DLGVAKRSR-HCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQ 216
D G+A+ + F T Y APE ++ S DIW++GC++ EMLS R
Sbjct: 167 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 226
Query: 217 AWVVKEDCSIDQLFSIIG 234
+ K +DQL I+G
Sbjct: 227 IFPGKH--YLDQLNHILG 242
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 22/195 (11%)
Query: 86 NLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILL 145
N+ +E GG+LG L+++ LPE ++ LEG+ ++H +H DVK DN+LL
Sbjct: 142 NIFMELLEGGSLGQLVKE--QGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLL 199
Query: 146 VATQSGKFVAKIADLGVA---KRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIW 202
+ S A + D G A + K + GT ++APE V+ +A D+W
Sbjct: 200 SSDGSH---AALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVW 256
Query: 203 ALGCVVLEMLSGRQAWVVKEDCSIDQLF------SIIGDEHSLPEIPSRVSKEARDFLRR 256
+ C++L ML+G W Q F I + + EIP + ++
Sbjct: 257 SSCCMMLHMLNGCHPWT--------QFFRGPLCLKIASEPPPVREIPPSCAPLTAQAIQE 308
Query: 257 CFVRKPAFRFTAEML 271
++P R +A L
Sbjct: 309 GLRKEPIHRVSAAEL 323
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 8/138 (5%)
Query: 99 DLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIA 158
DL + L + +F IL G+ +IH + +H D+KP N+LL T KI
Sbjct: 115 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD----LKIC 170
Query: 159 DLGVAKRSR-HCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQ 216
D G+A+ + F T Y APE ++ S DIW++GC++ EMLS R
Sbjct: 171 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 230
Query: 217 AWVVKEDCSIDQLFSIIG 234
+ K +DQL I+G
Sbjct: 231 IFPGKH--YLDQLNHILG 246
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 8/138 (5%)
Query: 99 DLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIA 158
DL + L + +F IL G+ +IH + +H D+KP N+LL T KI
Sbjct: 111 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD----LKIC 166
Query: 159 DLGVAKRSR-HCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQ 216
D G+A+ + F T Y APE ++ S DIW++GC++ EMLS R
Sbjct: 167 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 226
Query: 217 AWVVKEDCSIDQLFSIIG 234
+ K +DQL I+G
Sbjct: 227 IFPGKH--YLDQLNHILG 242
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 8/138 (5%)
Query: 99 DLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIA 158
DL + L + +F IL G+ +IH + +H D+KP N+LL T KI
Sbjct: 115 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD----LKIC 170
Query: 159 DLGVAKRSR-HCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQ 216
D G+A+ + F T Y APE ++ S DIW++GC++ EMLS R
Sbjct: 171 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 230
Query: 217 AWVVKEDCSIDQLFSIIG 234
+ K +DQL I+G
Sbjct: 231 IFPGKH--YLDQLNHILG 246
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 126/293 (43%), Gaps = 46/293 (15%)
Query: 12 RVIGQGSFGCVFIAKP-KSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLEC 70
+ IG+G+F V +A+ + ++ L +E + LN P +++
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLN-HPNIVKL 78
Query: 71 FGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHD 130
F E+ E L++EYA+GG + D + + EK+ R R I+ + + H
Sbjct: 79 F--EVI---ETEKTLYLVMEYASGGEVFDYL--VAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 131 SGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETV 190
VH D+K +N+LL A + KIAD G + + K D + G+P Y APE
Sbjct: 132 KFIVHRDLKAENLLLDADMN----IKIADFGFS--NEFTFGNKLD-TFCGSPPYAAPELF 184
Query: 191 VQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRV--- 246
+ P D+W+LG ++ ++SG S+ D +L E+ RV
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSG----------------SLPFDGQNLKELRERVLRG 228
Query: 247 --------SKEARDFLRRCFVRKPAFRFTAEMLLDDPF--VKGVDEELSRELE 289
S + + L++ + P+ R T E ++ D + V D+EL +E
Sbjct: 229 KYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVE 281
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 118/266 (44%), Gaps = 27/266 (10%)
Query: 12 RVIGQGSFGCVFIAKPKSNSS----FLPPLMXXXX--XXXXXXXXLQKEKEVFDNLNGCP 65
+V+G G++G VF+ + S + ++ + E++V +++ P
Sbjct: 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 119
Query: 66 FVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGI 125
F++ + E +L+L+Y GG L E +V+ + I+ +
Sbjct: 120 FLVT-----LHYAFQTETKLHLILDYINGGEL--FTHLSQRERFTEHEVQIYVGEIVLAL 172
Query: 126 GHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQK-FDPSMRGTPLY 184
H+H G ++ D+K +NILL +G V + D G++K + ++ +D GT Y
Sbjct: 173 EHLHKLGIIYRDIKLENILL--DSNGHVV--LTDFGLSKEFVADETERAYD--FCGTIEY 226
Query: 185 LAPETVV--QHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFS--IIGDEHSLP 240
+AP+ V + D W+LG ++ E+L+G + V + + S I+ E P
Sbjct: 227 MAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSE---P 283
Query: 241 EIPSRVSKEARDFLRRCFVRKPAFRF 266
P +S A+D ++R ++ P R
Sbjct: 284 PYPQEMSALAKDLIQRLLMKDPKKRL 309
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 8/138 (5%)
Query: 99 DLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIA 158
DL + L + +F IL G+ +IH + +H D+KP N+LL T KI
Sbjct: 111 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD----LKIC 166
Query: 159 DLGVAKRSR-HCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQ 216
D G+A+ + F T Y APE ++ S DIW++GC++ EMLS R
Sbjct: 167 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 226
Query: 217 AWVVKEDCSIDQLFSIIG 234
+ K +DQL I+G
Sbjct: 227 IFPGKH--YLDQLNHILG 242
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 128/303 (42%), Gaps = 68/303 (22%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLEC 70
G+ IG GSFG V+ K + + ++ + P L+
Sbjct: 29 GQRIGSGSFGTVYKGKWHGDVAV----------------------KMLNVTAPTPQQLQA 66
Query: 71 FGEEI-TMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPE-----------KDVRHFT 118
F E+ + + + L + Y+ L + + C G+ L K +
Sbjct: 67 FKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIA 126
Query: 119 RCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVA-KRSRHCKRQKFDPS 177
R G+ ++H +H D+K +NI L + KI D G+A ++SR +F+
Sbjct: 127 RQTARGMDYLHAKSIIHRDLKSNNIFLHEDNT----VKIGDFGLATEKSRWSGSHQFE-Q 181
Query: 178 MRGTPLYLAPETVVQHMQEA-----PSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSI 232
+ G+ L++APE + MQ++ SD++A G V+ E+++G+ + + DQ+ +
Sbjct: 182 LSGSILWMAPEVI--RMQDSNPYSFQSDVYAFGIVLYELMTGQLPY--SNINNRDQIIEM 237
Query: 233 IGDEHSLPEI-------PSRVSKEARDFLRRCFVRKPAF-RFTAEMLLDDPFVKGVDEEL 284
+G P++ P R+ + + L++ +P+F R AE+ EEL
Sbjct: 238 VGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEI-----------EEL 286
Query: 285 SRE 287
+RE
Sbjct: 287 ARE 289
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 125/293 (42%), Gaps = 46/293 (15%)
Query: 12 RVIGQGSFGCVFIAKP-KSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLEC 70
+ IG+G+F V +A+ + ++ L +E + LN P +++
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLN-HPNIVKL 78
Query: 71 FGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHD 130
F E+ E L++EYA+GG + D + + EK+ R R I+ + + H
Sbjct: 79 F--EVI---ETEKTLYLVMEYASGGEVFDYL--VAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 131 SGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETV 190
VH D+K +N+LL A + KIAD G + + K D + G P Y APE
Sbjct: 132 KFIVHRDLKAENLLLDADMN----IKIADFGFS--NEFTFGNKLD-AFCGAPPYAAPELF 184
Query: 191 VQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRV--- 246
+ P D+W+LG ++ ++SG S+ D +L E+ RV
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSG----------------SLPFDGQNLKELRERVLRG 228
Query: 247 --------SKEARDFLRRCFVRKPAFRFTAEMLLDDPF--VKGVDEELSRELE 289
S + + L++ + P+ R T E ++ D + V D+EL +E
Sbjct: 229 KYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVE 281
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 12/165 (7%)
Query: 65 PFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEG 124
P ++ + G + Y +++EY G TL D++ G P++ + +
Sbjct: 72 PAIVAVYATGEAETPAGPLPY-IVMEYVDGVTLRDIVH-TEGPMTPKRAIEVIADA-CQA 128
Query: 125 IGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKR---SRHCKRQKFDPSMRGT 181
+ H +G +H DVKP NI++ AT + K+ D G+A+ S + Q ++ GT
Sbjct: 129 LNFSHQNGIIHRDVKPANIMISATNA----VKVMDFGIARAIADSGNSVTQTA--AVIGT 182
Query: 182 PLYLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSI 226
YL+PE +A SD+++LGCV+ E+L+G + S+
Sbjct: 183 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV 227
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 98/222 (44%), Gaps = 31/222 (13%)
Query: 13 VIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV----- 67
V+GQG+FG V A+ +S + + + E + +LN V
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYA--IKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAA 70
Query: 68 -LE--CFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEG 124
LE F + +T + + + +EY GTL DLI N N ++ R F R ILE
Sbjct: 71 WLERRNFVKPMTAVKKKSTLF-IQMEYCENGTLYDLIHSENLNQQRDEYWRLF-RQILEA 128
Query: 125 IGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKR-SRHCKRQKFD-------- 175
+ +IH G +H D+KP NI + +++ KI D G+AK R K D
Sbjct: 129 LSYIHSQGIIHRDLKPMNIFIDESRN----VKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 176 ---PSMRGTPLYLAPETV--VQHMQEAPSDIWALGCVVLEML 212
S GT +Y+A E + H E D+++LG + EM+
Sbjct: 185 DNLTSAIGTAMYVATEVLDGTGHYNEKI-DMYSLGIIFFEMI 225
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 76/149 (51%), Gaps = 12/149 (8%)
Query: 81 GEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKP 140
G + Y +++EY G TL D++ G P++ + + + H +G +H DVKP
Sbjct: 88 GPLPY-IVMEYVDGVTLRDIVH-TEGPMTPKRAIEVIADA-CQALNFSHQNGIIHRDVKP 144
Query: 141 DNILLVATQSGKFVAKIADLGVAKR---SRHCKRQKFDPSMRGTPLYLAPETVVQHMQEA 197
NI++ AT + K+ D G+A+ S + Q ++ GT YL+PE +A
Sbjct: 145 ANIMISATNA----VKVMDFGIARAIADSGNSVTQTA--AVIGTAQYLSPEQARGDSVDA 198
Query: 198 PSDIWALGCVVLEMLSGRQAWVVKEDCSI 226
SD+++LGCV+ E+L+G + S+
Sbjct: 199 RSDVYSLGCVLYEVLTGEPPFTGDSPVSV 227
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 30/179 (16%)
Query: 124 GIGHIHDSGYVHCDVKPDNILL-VATQSGKFVAKIADLGVAKR---SRHCKRQKFDPSMR 179
G+ H+H VH D+KP NIL+ + GK A I+D G+ K+ RH ++ +
Sbjct: 130 GLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRR--SGVP 187
Query: 180 GTPLYLAPETVVQHMQEAPS---DIWALGCVVLEMLS----------GRQAWVVKEDCSI 226
GT ++APE + + +E P+ DI++ GCV ++S RQA ++ CS+
Sbjct: 188 GTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSL 247
Query: 227 DQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGVDEELS 285
D L PE V AR+ + + P R +A+ +L PF ++++L
Sbjct: 248 DCLH---------PEKHEDVI--ARELIEKMIAMDPQKRPSAKHVLKHPFFWSLEKQLQ 295
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 76/149 (51%), Gaps = 12/149 (8%)
Query: 81 GEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKP 140
G + Y +++EY G TL D++ G P++ + + + H +G +H DVKP
Sbjct: 88 GPLPY-IVMEYVDGVTLRDIVH-TEGPMTPKRAIEVIADAC-QALNFSHQNGIIHRDVKP 144
Query: 141 DNILLVATQSGKFVAKIADLGVAKR---SRHCKRQKFDPSMRGTPLYLAPETVVQHMQEA 197
NI++ AT + K+ D G+A+ S + Q ++ GT YL+PE +A
Sbjct: 145 ANIMISATNA----VKVMDFGIARAIADSGNSVTQTA--AVIGTAQYLSPEQARGDSVDA 198
Query: 198 PSDIWALGCVVLEMLSGRQAWVVKEDCSI 226
SD+++LGCV+ E+L+G + S+
Sbjct: 199 RSDVYSLGCVLYEVLTGEPPFTGDSPVSV 227
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 91/219 (41%), Gaps = 16/219 (7%)
Query: 5 GTSWFRGRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGC 64
G + GR IG GSFG +++ ++ + + K ++ G
Sbjct: 8 GNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQGGVGI 67
Query: 65 PFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEG 124
P + C G G+ YN+++ G +L DL C+ K V ++
Sbjct: 68 PSIKWC-------GAEGD--YNVMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISR 117
Query: 125 IGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDP-----SMR 179
I +IH ++H DVKPDN L+ + G V I D G+AK+ R + + P ++
Sbjct: 118 IEYIHSKNFIHRDVKPDNFLMGLGKKGNLVY-IIDFGLAKKYRDARTHQHIPYRENKNLT 176
Query: 180 GTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAW 218
GT Y + T + Q D+ +LG V++ G W
Sbjct: 177 GTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW 215
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 19/174 (10%)
Query: 108 GLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSR 167
L E+ R F +LE + H H+ G +H D+K +NI L+ G+ K+ D G +
Sbjct: 153 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI-LIDLNRGEL--KLIDFGSGALLK 209
Query: 168 HCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSI 226
FD GT +Y PE + H S +W+LG ++ +M+ G + E+
Sbjct: 210 DTVYTDFD----GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 265
Query: 227 DQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGV 280
Q+F RVS E + +R C +P+ R T E + + P+++ V
Sbjct: 266 GQVF-----------FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 308
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 73/137 (53%), Gaps = 12/137 (8%)
Query: 81 GEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKP 140
G + Y +++EY G TL D++ G P++ + + + H +G +H DVKP
Sbjct: 88 GPLPY-IVMEYVDGVTLRDIVH-TEGPMTPKRAIEVIADAC-QALNFSHQNGIIHRDVKP 144
Query: 141 DNILLVATQSGKFVAKIADLGVAKR---SRHCKRQKFDPSMRGTPLYLAPETVVQHMQEA 197
NI++ AT + K+ D G+A+ S + Q ++ GT YL+PE +A
Sbjct: 145 ANIMISATNA----VKVMDFGIARAIADSGNSVTQTA--AVIGTAQYLSPEQARGDSVDA 198
Query: 198 PSDIWALGCVVLEMLSG 214
SD+++LGCV+ E+L+G
Sbjct: 199 RSDVYSLGCVLYEVLTG 215
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 24/166 (14%)
Query: 98 GDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKI 157
DL L ++ V+ +L G+ +IH +G +H D+KP N+ + + +I
Sbjct: 117 ADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNV--AVNEDSEL--RI 172
Query: 158 ADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLS 213
D G+A+++ D M G T Y APE ++ M + DIW++GC++ E+L
Sbjct: 173 LDFGLARQA--------DEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQ 224
Query: 214 GRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLR 255
G+ + + IDQL ++G PE+ +++S E AR +++
Sbjct: 225 GKALFPGSD--YIDQLKRIMEVVGTPS--PEVLAKISSEHARTYIQ 266
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 19/174 (10%)
Query: 108 GLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSR 167
L E+ R F +LE + H H+ G +H D+K +NI L+ G+ K+ D G +
Sbjct: 111 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI-LIDLNRGEL--KLIDFGSGALLK 167
Query: 168 HCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSI 226
FD GT +Y PE + H S +W+LG ++ +M+ G + E+
Sbjct: 168 DTVYTDFD----GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 223
Query: 227 DQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGV 280
Q+F RVS E + +R C +P+ R T E + + P+++ V
Sbjct: 224 GQVF-----------FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 266
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 125/293 (42%), Gaps = 46/293 (15%)
Query: 12 RVIGQGSFGCVFIAKP-KSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLEC 70
+ IG+G+F V +A+ + ++ L +E + LN P +++
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLN-HPNIVKL 78
Query: 71 FGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHD 130
F E+ E L++EYA+GG + D + + EK+ R R I+ + + H
Sbjct: 79 F--EVI---ETEKTLYLVMEYASGGEVFDYL--VAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 131 SGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETV 190
VH D+K +N+LL A + KIAD G + + K D G+P Y APE
Sbjct: 132 KFIVHRDLKAENLLLDADMN----IKIADFGFS--NEFTFGNKLD-EFCGSPPYAAPELF 184
Query: 191 VQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRV--- 246
+ P D+W+LG ++ ++SG S+ D +L E+ RV
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSG----------------SLPFDGQNLKELRERVLRG 228
Query: 247 --------SKEARDFLRRCFVRKPAFRFTAEMLLDDPF--VKGVDEELSRELE 289
S + + L++ + P+ R T E ++ D + V D+EL +E
Sbjct: 229 KYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVE 281
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 94/222 (42%), Gaps = 22/222 (9%)
Query: 5 GTSWFRGRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNG- 63
G + GR IG GSFG +++ ++ + + L E +++ + G
Sbjct: 8 GNRYRLGRKIGSGSFGDIYLG---TDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGG 64
Query: 64 --CPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCI 121
P + C G G+ YN+++ G +L DL C+ K V +
Sbjct: 65 VGIPTIRWC-------GAEGD--YNVMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQM 114
Query: 122 LEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDP----- 176
+ I +IH ++H DVKPDN L+ + G V I D G+AK+ R + + P
Sbjct: 115 ISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVY-IIDFGLAKKYRDARTHQHIPYRENK 173
Query: 177 SMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAW 218
++ GT Y + T + Q D+ +LG V++ G W
Sbjct: 174 NLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW 215
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 88/170 (51%), Gaps = 27/170 (15%)
Query: 94 GGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKF 153
G L +++ KC L ++ V+ +L G+ +IH +G +H D+KP N+ + +
Sbjct: 116 GADLNNIV-KCQA--LSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNV--AVNEDSEL 170
Query: 154 VAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWALGCVVL 209
+I D G+A+++ D M G T Y APE ++ M + DIW++GC++
Sbjct: 171 --RILDFGLARQA--------DEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 220
Query: 210 EMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLR 255
E+L G+ + + IDQL ++G PE+ +++S E AR +++
Sbjct: 221 ELLQGKALFPGSD--YIDQLKRIMEVVGTPS--PEVLAKISSEHARTYIQ 266
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 110 LVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 164
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI D G+A+ + D M G T Y APE ++ M + DIW+
Sbjct: 165 NEDSEL--KILDFGLARHT--------DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 214
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 215 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLT 269
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 270 QMPKMNFANVFIGANPLAVDLLEKM 294
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 92/212 (43%), Gaps = 32/212 (15%)
Query: 99 DLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKF----V 154
DL + L + +++F L + +H S +H D+KP N+L+ + K +
Sbjct: 99 DLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGL 158
Query: 155 AKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLS 213
A+I D A S +Q T Y APE ++ + + + D+W+ GC++ E+
Sbjct: 159 ARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL 218
Query: 214 GRQAWVVKE-DCSIDQLFSIIGDEH------------------SLPEIPS--------RV 246
R + ++ + +F IIG H SLP P+ RV
Sbjct: 219 RRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRV 278
Query: 247 SKEARDFLRRCFVRKPAFRFTAEMLLDDPFVK 278
+ + D L+R V PA R TA+ L+ P+++
Sbjct: 279 NPKGIDLLQRMLVFDPAKRITAKEALEHPYLQ 310
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 83/184 (45%), Gaps = 20/184 (10%)
Query: 99 DLIEKCNGNG-LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKI 157
DL + G L E+ R F +LE + H H+ G +H D+K +NI L+ G+ K+
Sbjct: 96 DLFDFITERGALQEELARSFFWQVLEAVRHCHNXGVLHRDIKDENI-LIDLNRGEL--KL 152
Query: 158 ADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQ 216
D G + FD GT +Y PE + H S +W+LG ++ +M+ G
Sbjct: 153 IDFGSGALLKDTVYTDFD----GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 208
Query: 217 AWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPF 276
+ E+ Q+F RVS E + +R C +P+ R T E + + P+
Sbjct: 209 PFEHDEEIIRGQVF-----------FRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHPW 257
Query: 277 VKGV 280
++ V
Sbjct: 258 MQDV 261
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 94/222 (42%), Gaps = 22/222 (9%)
Query: 5 GTSWFRGRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNG- 63
G + GR IG GSFG +++ ++ + + L E +++ + G
Sbjct: 6 GNRYRLGRKIGSGSFGDIYLG---TDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGG 62
Query: 64 --CPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCI 121
P + C G G+ YN+++ G +L DL C+ K V +
Sbjct: 63 VGIPTIRWC-------GAEGD--YNVMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQM 112
Query: 122 LEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDP----- 176
+ I +IH ++H DVKPDN L+ + G V I D G+AK+ R + + P
Sbjct: 113 ISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVY-IIDFGLAKKYRDARTHQHIPYRENK 171
Query: 177 SMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAW 218
++ GT Y + T + Q D+ +LG V++ G W
Sbjct: 172 NLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW 213
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 19/174 (10%)
Query: 108 GLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSR 167
L E+ R F +LE + H H+ G +H D+K +NI L+ G+ K+ D G +
Sbjct: 111 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI-LIDLNRGEL--KLIDFGSGALLK 167
Query: 168 HCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSI 226
FD GT +Y PE + H S +W+LG ++ +M+ G + E+
Sbjct: 168 DTVYTDFD----GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 223
Query: 227 DQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGV 280
Q+F RVS E + +R C +P+ R T E + + P+++ V
Sbjct: 224 GQVF-----------FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 266
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 19/174 (10%)
Query: 108 GLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSR 167
L E+ R F +LE + H H+ G +H D+K +NI L+ G+ K+ D G +
Sbjct: 126 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI-LIDLNRGEL--KLIDFGSGALLK 182
Query: 168 HCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSI 226
FD GT +Y PE + H S +W+LG ++ +M+ G + E+
Sbjct: 183 DTVYTDFD----GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 238
Query: 227 DQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGV 280
Q+F RVS E + +R C +P+ R T E + + P+++ V
Sbjct: 239 GQVF-----------FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 281
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 117/272 (43%), Gaps = 25/272 (9%)
Query: 14 IGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLECFGE 73
IG GSFG V A+ + + LM L +E + L VL F
Sbjct: 45 IGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFL-REVAIMKRLRHPNIVL--FMG 101
Query: 74 EITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGN-GLPEKDVRHFTRCILEGIGHIHDSG 132
+T N +++ EY + G+L L+ K L E+ + +G+ ++H+
Sbjct: 102 AVTQPPN----LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN 157
Query: 133 --YVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKF--DPSMRGTPLYLAPE 188
VH ++K N+L+ K+ K+ D G+++ K F S GTP ++APE
Sbjct: 158 PPIVHRNLKSPNLLV----DKKYTVKVCDFGLSR----LKASTFLSSKSAAGTPEWMAPE 209
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSK 248
+ SD+++ G ++ E+ + +Q W + + Q+ + +G + EIP ++
Sbjct: 210 VLRDEPSNEKSDVYSFGVILWELATLQQPW---GNLNPAQVVAAVGFKCKRLEIPRNLNP 266
Query: 249 EARDFLRRCFVRKPAFR--FTAEMLLDDPFVK 278
+ + C+ +P R F M L P +K
Sbjct: 267 QVAAIIEGCWTNEPWKRPSFATIMDLLRPLIK 298
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 7/124 (5%)
Query: 89 LEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVAT 148
+E+ GTL IEK G L + I +G+ +IH +H D+KP NI LV T
Sbjct: 113 MEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDT 172
Query: 149 QSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVV 208
+ KI D G+ ++ ++ +GT Y++PE + D++ALG ++
Sbjct: 173 KQ----VKIGDFGLVTSLKNDGKR---TRSKGTLRYMSPEQISSQDYGKEVDLYALGLIL 225
Query: 209 LEML 212
E+L
Sbjct: 226 AELL 229
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 73/137 (53%), Gaps = 12/137 (8%)
Query: 81 GEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKP 140
G + Y +++EY G TL D++ G P++ + + + H +G +H DVKP
Sbjct: 105 GPLPY-IVMEYVDGVTLRDIVH-TEGPMTPKRAIEVIADA-CQALNFSHQNGIIHRDVKP 161
Query: 141 DNILLVATQSGKFVAKIADLGVAKR---SRHCKRQKFDPSMRGTPLYLAPETVVQHMQEA 197
NI++ AT + K+ D G+A+ S + Q ++ GT YL+PE +A
Sbjct: 162 ANIMISATNA----VKVMDFGIARAIADSGNSVTQTA--AVIGTAQYLSPEQARGDSVDA 215
Query: 198 PSDIWALGCVVLEMLSG 214
SD+++LGCV+ E+L+G
Sbjct: 216 RSDVYSLGCVLYEVLTG 232
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 106 LVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 160
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI D G+A+ + D M G T Y APE ++ M + DIW+
Sbjct: 161 NEDSEL--KILDFGLARHT--------DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 210
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 211 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLT 265
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 266 QMPKMNFANVFIGANPLAVDLLEKM 290
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 83/162 (51%), Gaps = 12/162 (7%)
Query: 105 NGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAK 164
N GL + ++ + +L G+ H H +H D+KP N+L+ + + K+AD G+A+
Sbjct: 112 NKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGA----LKLADFGLAR 167
Query: 165 RSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWV-VKE 222
R + T Y AP+ ++ + + S DIW++GC+ EM++G+ + V +
Sbjct: 168 AFGIPVRSYTHEVV--TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTD 225
Query: 223 DCSIDQLFSIIG--DEHSLPEIPSRVSKEARDFLRRCFVRKP 262
D + ++FSI+G + P++ + R F + F +KP
Sbjct: 226 DDQLPKIFSILGTPNPREWPQVQELPLWKQRTF--QVFEKKP 265
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 127/288 (44%), Gaps = 37/288 (12%)
Query: 12 RVIGQGSFGCVF-IAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNL---NGCPFV 67
R+IG+G FG V+ K + + + L + + +L CPF+
Sbjct: 195 RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFI 254
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGL-PEKDVRHFTRCILEGIG 126
+ C + + +L+ GG DL + +G+ E D+R + I+ G+
Sbjct: 255 V-CMSYAFHTPDK----LSFILDLMNGG---DLHYHLSQHGVFSEADMRFYAAEIILGLE 306
Query: 127 HIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMR-GTPLYL 185
H+H+ V+ D+KP NILL + G +I+DLG+A C K P GT Y+
Sbjct: 307 HMHNRFVVYRDLKPANILL--DEHGH--VRISDLGLA-----CDFSKKKPHASVGTHGYM 357
Query: 186 APETVVQHM-QEAPSDIWALGCVVLEMLSGRQAW---VVKEDCSIDQLFSIIGDEHSLPE 241
APE + + + ++ +D ++LGC++ ++L G + K+ ID++ + E
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA-----VE 412
Query: 242 IPSRVSKEARDFLRRCFVRKPAFRF-----TAEMLLDDPFVKGVDEEL 284
+P S E R L R R A+ + + PF + +D ++
Sbjct: 413 LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQM 460
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 127/288 (44%), Gaps = 37/288 (12%)
Query: 12 RVIGQGSFGCVF-IAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNL---NGCPFV 67
R+IG+G FG V+ K + + + L + + +L CPF+
Sbjct: 194 RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFI 253
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGL-PEKDVRHFTRCILEGIG 126
+ C + + +L+ GG DL + +G+ E D+R + I+ G+
Sbjct: 254 V-CMSYAFHTPDK----LSFILDLMNGG---DLHYHLSQHGVFSEADMRFYAAEIILGLE 305
Query: 127 HIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMR-GTPLYL 185
H+H+ V+ D+KP NILL + G +I+DLG+A C K P GT Y+
Sbjct: 306 HMHNRFVVYRDLKPANILL--DEHGH--VRISDLGLA-----CDFSKKKPHASVGTHGYM 356
Query: 186 APETVVQHM-QEAPSDIWALGCVVLEMLSGRQAW---VVKEDCSIDQLFSIIGDEHSLPE 241
APE + + + ++ +D ++LGC++ ++L G + K+ ID++ + E
Sbjct: 357 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA-----VE 411
Query: 242 IPSRVSKEARDFLRRCFVRKPAFRF-----TAEMLLDDPFVKGVDEEL 284
+P S E R L R R A+ + + PF + +D ++
Sbjct: 412 LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQM 459
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 19/174 (10%)
Query: 108 GLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSR 167
L E+ R F +LE + H H+ G +H D+K +NI L+ G+ K+ D G +
Sbjct: 125 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI-LIDLNRGEL--KLIDFGSGALLK 181
Query: 168 HCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSI 226
FD GT +Y PE + H S +W+LG ++ +M+ G + E+
Sbjct: 182 DTVYTDFD----GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 237
Query: 227 DQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGV 280
Q+F RVS E + +R C +P+ R T E + + P+++ V
Sbjct: 238 GQVF-----------FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 280
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 83/162 (51%), Gaps = 12/162 (7%)
Query: 105 NGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAK 164
N GL + ++ + +L G+ H H +H D+KP N+L+ + + K+AD G+A+
Sbjct: 112 NKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGA----LKLADFGLAR 167
Query: 165 RSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWV-VKE 222
R + T Y AP+ ++ + + S DIW++GC+ EM++G+ + V +
Sbjct: 168 AFGIPVRSYTHEVV--TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTD 225
Query: 223 DCSIDQLFSIIG--DEHSLPEIPSRVSKEARDFLRRCFVRKP 262
D + ++FSI+G + P++ + R F + F +KP
Sbjct: 226 DDQLPKIFSILGTPNPREWPQVQELPLWKQRTF--QVFEKKP 265
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 19/174 (10%)
Query: 108 GLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSR 167
L E+ R F +LE + H H+ G +H D+K +NI L+ G+ K+ D G +
Sbjct: 145 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI-LIDLNRGEL--KLIDFGSGALLK 201
Query: 168 HCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSI 226
FD GT +Y PE + H S +W+LG ++ +M+ G + E+
Sbjct: 202 DTVYTDFD----GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 257
Query: 227 DQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGV 280
Q+F RVS E + +R C +P+ R T E + + P+++ V
Sbjct: 258 GQVF-----------FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 300
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 92/212 (43%), Gaps = 32/212 (15%)
Query: 99 DLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKF----V 154
DL + L + +++F L + +H S +H D+KP N+L+ + K +
Sbjct: 99 DLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGL 158
Query: 155 AKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLS 213
A+I D A S +Q T Y APE ++ + + + D+W+ GC++ E+
Sbjct: 159 ARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL 218
Query: 214 GRQAWVVKE-DCSIDQLFSIIGDEH------------------SLPEIPS--------RV 246
R + ++ + +F IIG H SLP P+ RV
Sbjct: 219 RRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRV 278
Query: 247 SKEARDFLRRCFVRKPAFRFTAEMLLDDPFVK 278
+ + D L+R V PA R TA+ L+ P+++
Sbjct: 279 NPKGIDLLQRMLVFDPAKRITAKEALEHPYLQ 310
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 19/174 (10%)
Query: 108 GLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSR 167
L E+ R F +LE + H H+ G +H D+K +NI L+ G+ K+ D G +
Sbjct: 138 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI-LIDLNRGEL--KLIDFGSGALLK 194
Query: 168 HCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSI 226
FD GT +Y PE + H S +W+LG ++ +M+ G + E+
Sbjct: 195 DTVYTDFD----GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 250
Query: 227 DQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGV 280
Q+F RVS E + +R C +P+ R T E + + P+++ V
Sbjct: 251 GQVF-----------FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 293
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 92/193 (47%), Gaps = 25/193 (12%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ E+ A G+L D ++ G+ P + F+ I EG+ I Y+H D++ NIL+
Sbjct: 253 IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVS 312
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPL-YLAPETVVQHMQEAPSDIWALG 205
A+ V KIAD G+A+ KF P+ + APE + SD+W+ G
Sbjct: 313 AS----LVCKIADFGLARVG-----AKF-------PIKWTAPEAINFGSFTIKSDVWSFG 356
Query: 206 CVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAF 264
+++E+++ GR + S ++ + + +P P +E + + RC+ +P
Sbjct: 357 ILLMEIVTYGR---IPYPGMSNPEVIRALERGYRMPR-PENCPEELYNIMMRCWKNRPEE 412
Query: 265 RFTAEML---LDD 274
R T E + LDD
Sbjct: 413 RPTFEYIQSVLDD 425
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 19/174 (10%)
Query: 108 GLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSR 167
L E+ R F +LE + H H+ G +H D+K +NI L+ G+ K+ D G +
Sbjct: 109 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI-LIDLNRGEL--KLIDFGSGALLK 165
Query: 168 HCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSI 226
FD GT +Y PE + H S +W+LG ++ +M+ G + E+
Sbjct: 166 DTVYTDFD----GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 221
Query: 227 DQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGV 280
Q+F RVS E + +R C +P+ R T E + + P+++ V
Sbjct: 222 GQVF-----------FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 264
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 117/272 (43%), Gaps = 25/272 (9%)
Query: 14 IGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLECFGE 73
IG GSFG V A+ + + LM L +E + L VL F
Sbjct: 45 IGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFL-REVAIMKRLRHPNIVL--FMG 101
Query: 74 EITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGN-GLPEKDVRHFTRCILEGIGHIHDSG 132
+T N +++ EY + G+L L+ K L E+ + +G+ ++H+
Sbjct: 102 AVTQPPN----LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN 157
Query: 133 --YVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMR--GTPLYLAPE 188
VH D+K N+L+ K+ K+ D G+++ K F S GTP ++APE
Sbjct: 158 PPIVHRDLKSPNLLV----DKKYTVKVCDFGLSR----LKASXFLXSKXAAGTPEWMAPE 209
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSK 248
+ SD+++ G ++ E+ + +Q W + + Q+ + +G + EIP ++
Sbjct: 210 VLRDEPSNEKSDVYSFGVILWELATLQQPW---GNLNPAQVVAAVGFKCKRLEIPRNLNP 266
Query: 249 EARDFLRRCFVRKPAFR--FTAEMLLDDPFVK 278
+ + C+ +P R F M L P +K
Sbjct: 267 QVAAIIEGCWTNEPWKRPSFATIMDLLRPLIK 298
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 19/174 (10%)
Query: 108 GLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSR 167
L E+ R F +LE + H H+ G +H D+K +NI L+ G+ K+ D G +
Sbjct: 153 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI-LIDLNRGEL--KLIDFGSGALLK 209
Query: 168 HCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSI 226
FD GT +Y PE + H S +W+LG ++ +M+ G + E+
Sbjct: 210 DTVYTDFD----GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 265
Query: 227 DQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGV 280
Q+F RVS E + +R C +P+ R T E + + P+++ V
Sbjct: 266 GQVF-----------FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 308
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 19/174 (10%)
Query: 108 GLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSR 167
L E+ R F +LE + H H+ G +H D+K +NI L+ G+ K+ D G +
Sbjct: 110 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI-LIDLNRGEL--KLIDFGSGALLK 166
Query: 168 HCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSI 226
FD GT +Y PE + H S +W+LG ++ +M+ G + E+
Sbjct: 167 DTVYTDFD----GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 222
Query: 227 DQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGV 280
Q+F RVS E + +R C +P+ R T E + + P+++ V
Sbjct: 223 GQVF-----------FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 265
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 19/174 (10%)
Query: 108 GLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSR 167
L E+ R F +LE + H H+ G +H D+K +NI L+ G+ K+ D G +
Sbjct: 110 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI-LIDLNRGEL--KLIDFGSGALLK 166
Query: 168 HCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSI 226
FD GT +Y PE + H S +W+LG ++ +M+ G + E+
Sbjct: 167 DTVYTDFD----GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 222
Query: 227 DQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGV 280
Q+F RVS E + +R C +P+ R T E + + P+++ V
Sbjct: 223 GQVF-----------FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 265
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 19/174 (10%)
Query: 108 GLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSR 167
L E+ R F +LE + H H+ G +H D+K +NI L+ G+ K+ D G +
Sbjct: 126 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI-LIDLNRGEL--KLIDFGSGALLK 182
Query: 168 HCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSI 226
FD GT +Y PE + H S +W+LG ++ +M+ G + E+
Sbjct: 183 DTVYTDFD----GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 238
Query: 227 DQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGV 280
Q+F RVS E + +R C +P+ R T E + + P+++ V
Sbjct: 239 GQVF-----------FRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 281
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 19/174 (10%)
Query: 108 GLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSR 167
L E+ R F +LE + H H+ G +H D+K +NI L+ G+ K+ D G +
Sbjct: 111 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI-LIDLNRGEL--KLIDFGSGALLK 167
Query: 168 HCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSI 226
FD GT +Y PE + H S +W+LG ++ +M+ G + E+
Sbjct: 168 DTVYTDFD----GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 223
Query: 227 DQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGV 280
Q+F RVS E + +R C +P+ R T E + + P+++ V
Sbjct: 224 GQVF-----------FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 266
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 19/174 (10%)
Query: 108 GLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSR 167
L E+ R F +LE + H H+ G +H D+K +NI L+ G+ K+ D G +
Sbjct: 125 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI-LIDLNRGEL--KLIDFGSGALLK 181
Query: 168 HCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSI 226
FD GT +Y PE + H S +W+LG ++ +M+ G + E+
Sbjct: 182 DTVYTDFD----GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 237
Query: 227 DQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGV 280
Q+F RVS E + +R C +P+ R T E + + P+++ V
Sbjct: 238 GQVF-----------FRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 280
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 19/174 (10%)
Query: 108 GLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSR 167
L E+ R F +LE + H H+ G +H D+K +NI L+ G+ K+ D G +
Sbjct: 153 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI-LIDLNRGEL--KLIDFGSGALLK 209
Query: 168 HCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSI 226
FD GT +Y PE + H S +W+LG ++ +M+ G + E+
Sbjct: 210 DTVYTDFD----GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 265
Query: 227 DQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGV 280
Q+F RVS E + +R C +P+ R T E + + P+++ V
Sbjct: 266 GQVF-----------FRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 308
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 19/174 (10%)
Query: 108 GLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSR 167
L E+ R F +LE + H H+ G +H D+K +NI L+ G+ K+ D G +
Sbjct: 106 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI-LIDLNRGEL--KLIDFGSGALLK 162
Query: 168 HCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSI 226
FD GT +Y PE + H S +W+LG ++ +M+ G + E+
Sbjct: 163 DTVYTDFD----GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 218
Query: 227 DQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGV 280
Q+F RVS E + +R C +P+ R T E + + P+++ V
Sbjct: 219 GQVF-----------FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 261
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 19/174 (10%)
Query: 108 GLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSR 167
L E+ R F +LE + H H+ G +H D+K +NI L+ G+ K+ D G +
Sbjct: 139 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI-LIDLNRGEL--KLIDFGSGALLK 195
Query: 168 HCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSI 226
FD GT +Y PE + H S +W+LG ++ +M+ G + E+
Sbjct: 196 DTVYTDFD----GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIG 251
Query: 227 DQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGV 280
Q+F RVS E + +R C +P+ R T E + + P+++ V
Sbjct: 252 GQVF-----------FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 294
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 19/174 (10%)
Query: 108 GLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSR 167
L E+ R F +LE + H H+ G +H D+K +NI L+ G+ K+ D G +
Sbjct: 139 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI-LIDLNRGEL--KLIDFGSGALLK 195
Query: 168 HCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSI 226
FD GT +Y PE + H S +W+LG ++ +M+ G + E+
Sbjct: 196 DTVYTDFD----GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIG 251
Query: 227 DQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGV 280
Q+F RVS E + +R C +P+ R T E + + P+++ V
Sbjct: 252 GQVF-----------FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 294
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 80/174 (45%), Gaps = 19/174 (10%)
Query: 108 GLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSR 167
L E+ R F +LE + H H+ G +H D+K +NI L+ G+ K+ D G +
Sbjct: 106 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI-LIDLNRGEL--KLIDFGSGALLK 162
Query: 168 HCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSI 226
FD GT +Y PE + H S +W+LG ++ +M+ G D
Sbjct: 163 DTVYTDFD----GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG--------DIPF 210
Query: 227 DQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGV 280
+ IIG + + RVS E + +R C +P+ R T E + + P+++ V
Sbjct: 211 EHDEEIIGGQVFFRQ---RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 261
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 83/184 (45%), Gaps = 20/184 (10%)
Query: 99 DLIEKCNGNG-LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKI 157
DL + G L E+ R F +LE + H H+ G +H D+K +NI L+ G+ K+
Sbjct: 123 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI-LIDLNRGEL--KL 179
Query: 158 ADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQ 216
D G + FD GT +Y PE + H S +W+LG ++ +M+ G
Sbjct: 180 IDFGSGALLKDTVYTDFD----GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 235
Query: 217 AWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPF 276
+ E+ Q+F RVS E + +R C +P+ R T E + + P+
Sbjct: 236 PFEHDEEIIRGQVF-----------FRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHPW 284
Query: 277 VKGV 280
++ V
Sbjct: 285 MQDV 288
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 19/174 (10%)
Query: 108 GLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSR 167
L E+ R F +LE + H H+ G +H D+K +NI L+ G+ K+ D G +
Sbjct: 158 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI-LIDLNRGEL--KLIDFGSGALLK 214
Query: 168 HCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSI 226
FD GT +Y PE + H S +W+LG ++ +M+ G + E+
Sbjct: 215 DTVYTDFD----GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 270
Query: 227 DQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGV 280
Q+F RVS E + +R C +P+ R T E + + P+++ V
Sbjct: 271 GQVF-----------FRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 313
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 97/223 (43%), Gaps = 27/223 (12%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILE---GIGHIHD---SGYVHCDVKP 140
L++EYA GG+L +++ LP H L+ G+ ++H +H D+KP
Sbjct: 77 LVMEYAEGGSLYNVLH--GAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKP 134
Query: 141 DNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSD 200
N+LLVA G V KI D G A C Q + +G+ ++APE D
Sbjct: 135 PNLLLVA---GGTVLKICDFGTA-----CDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCD 186
Query: 201 IWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEH--SLPEIPSRVSKEARDFLRRCF 258
+++ G ++ E+++ R+ + D F I+ H + P + + K + RC+
Sbjct: 187 VFSWGIILWEVITRRKPF----DEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCW 242
Query: 259 VRKPAFRFTAEMLLDD-----PFVKGVDEELSRELEGDYSQGE 296
+ P+ R + E ++ + G DE L + GE
Sbjct: 243 SKDPSQRPSMEEIVKIMTHLMRYFPGADEPLQYPCQHSLPPGE 285
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 19/174 (10%)
Query: 108 GLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSR 167
L E+ R F +LE + H H+ G +H D+K +NI L+ G+ K+ D G +
Sbjct: 138 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI-LIDLNRGEL--KLIDFGSGALLK 194
Query: 168 HCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSI 226
FD GT +Y PE + H S +W+LG ++ +M+ G + E+
Sbjct: 195 DTVYTDFD----GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIG 250
Query: 227 DQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGV 280
Q+F RVS E + +R C +P+ R T E + + P+++ V
Sbjct: 251 GQVF-----------FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 293
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 92/212 (43%), Gaps = 32/212 (15%)
Query: 99 DLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKF----V 154
DL + L + +++F L + +H S +H D+KP N+L+ + K +
Sbjct: 99 DLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGL 158
Query: 155 AKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLS 213
A+I D A S +Q T Y APE ++ + + + D+W+ GC++ E+
Sbjct: 159 ARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL 218
Query: 214 GRQAWVVKE-DCSIDQLFSIIGDEH------------------SLPEIPS--------RV 246
R + ++ + +F IIG H SLP P+ RV
Sbjct: 219 RRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRV 278
Query: 247 SKEARDFLRRCFVRKPAFRFTAEMLLDDPFVK 278
+ + D L+R V PA R TA+ L+ P+++
Sbjct: 279 NPKGIDLLQRMLVFDPAKRITAKEALEHPYLQ 310
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 8/138 (5%)
Query: 99 DLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIA 158
DL + L + +F IL G+ +IH + +H D+KP N+LL T KI
Sbjct: 113 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD----LKIC 168
Query: 159 DLGVAKRSR-HCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQ 216
D G+A+ + F T Y APE ++ S DIW++GC++ EMLS R
Sbjct: 169 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 228
Query: 217 AWVVKEDCSIDQLFSIIG 234
+ K +DQL I+G
Sbjct: 229 IFPGKH--YLDQLNHILG 244
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 113/270 (41%), Gaps = 23/270 (8%)
Query: 12 RVIGQGSFGCVFIAKPKSNSSF--LPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLE 69
R +G+G FG V++A+ K N L L L++E E+ +L P +L
Sbjct: 20 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH-PNILR 78
Query: 70 CFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIH 129
+ + + Y L+LE+A G L ++K E+ F + + + + H
Sbjct: 79 MY----NYFHDRKRIY-LMLEFAPRGELYKELQK--HGRFDEQRSATFMEELADALHYCH 131
Query: 130 DSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPET 189
+ +H D+KP+N+L+ K KIAD G + + +R+ M GT YL PE
Sbjct: 132 ERKVIHRDIKPENLLM----GYKGELKIADFGWSVHAPSLRRR----XMCGTLDYLPPEM 183
Query: 190 VVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKE 249
+ + D+W G + E L G + + I+ + P +S
Sbjct: 184 IEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHR--RIVNVDLKFPPF---LSDG 238
Query: 250 ARDFLRRCFVRKPAFRFTAEMLLDDPFVKG 279
++D + + P R + +++ P+VK
Sbjct: 239 SKDLISKLLRYHPPQRLPLKGVMEHPWVKA 268
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 103/240 (42%), Gaps = 48/240 (20%)
Query: 67 VLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIG 126
+L+ F ++ E ++ L+ + G L +++ KC L + V+ IL G+
Sbjct: 115 LLDVFTPATSLEEFNDV---YLVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLK 168
Query: 127 HIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPL 183
+IH + +H D+KP N L + + KI D G+A+ + D M G T
Sbjct: 169 YIHSADIIHRDLKPSN--LAVNEDCEL--KILDFGLARHT--------DDEMTGYVATRW 216
Query: 184 YLAPETVVQHMQ-EAPSDIWALGCVVLEMLSGRQAWVVKEDCS-IDQLFSIIGDE----- 236
Y APE ++ M DIW++GC++ E+L+GR + + + + Q+ + G
Sbjct: 217 YRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVI 276
Query: 237 ------------HSLPEIPSR--------VSKEARDFLRRCFVRKPAFRFTAEMLLDDPF 276
+SLP++P R + A D L + V R TA L P+
Sbjct: 277 SRMPSHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPY 336
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 8/138 (5%)
Query: 99 DLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIA 158
DL + L + +F IL G+ +IH + +H D+KP N+LL T KI
Sbjct: 113 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD----LKIC 168
Query: 159 DLGVAKRSR-HCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQ 216
D G+A+ + F T Y APE ++ S DIW++GC++ EMLS R
Sbjct: 169 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 228
Query: 217 AWVVKEDCSIDQLFSIIG 234
+ K +DQL I+G
Sbjct: 229 IFPGKH--YLDQLNHILG 244
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 19/174 (10%)
Query: 108 GLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSR 167
L E+ R F +LE + H H+ G +H D+K +NI L+ G+ K+ D G +
Sbjct: 138 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI-LIDLNRGEL--KLIDFGSGALLK 194
Query: 168 HCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSI 226
FD GT +Y PE + H S +W+LG ++ +M+ G + E+
Sbjct: 195 DTVYTDFD----GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIG 250
Query: 227 DQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGV 280
Q+F RVS E + +R C +P+ R T E + + P+++ V
Sbjct: 251 GQVF-----------FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 293
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 8/138 (5%)
Query: 99 DLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIA 158
DL + L + +F IL G+ +IH + +H D+KP N+LL T KI
Sbjct: 119 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD----LKIC 174
Query: 159 DLGVAKRSR-HCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQ 216
D G+A+ + F T Y APE ++ S DIW++GC++ EMLS R
Sbjct: 175 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 234
Query: 217 AWVVKEDCSIDQLFSIIG 234
+ K +DQL I+G
Sbjct: 235 IFPGKH--YLDQLNHILG 250
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 8/138 (5%)
Query: 99 DLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIA 158
DL + L + +F IL G+ +IH + +H D+KP N+LL T KI
Sbjct: 111 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD----LKIC 166
Query: 159 DLGVAKRSR-HCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQ 216
D G+A+ + F T Y APE ++ S DIW++GC++ EMLS R
Sbjct: 167 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 226
Query: 217 AWVVKEDCSIDQLFSIIG 234
+ K +DQL I+G
Sbjct: 227 IFPGKH--YLDQLNHILG 242
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 8/138 (5%)
Query: 99 DLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIA 158
DL + L + +F IL G+ +IH + +H D+KP N+LL T KI
Sbjct: 115 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD----LKIC 170
Query: 159 DLGVAKRSR-HCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQ 216
D G+A+ + F T Y APE ++ S DIW++GC++ EMLS R
Sbjct: 171 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 230
Query: 217 AWVVKEDCSIDQLFSIIG 234
+ K +DQL I+G
Sbjct: 231 IFPGKH--YLDQLNHILG 246
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 137/357 (38%), Gaps = 68/357 (19%)
Query: 12 RVIGQGSFGCVFIAK-PKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLEC 70
+VIG GSFG VF AK +S+ + ++ ++ K P V++
Sbjct: 46 KVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQIMRIVKH--------PNVVDL 97
Query: 71 FGEEITMGENG-EMAYNLLLEYAAGGTLGDLIEKCN-GNGLPEKDVRHFTRCILEGIGHI 128
+ G+ E+ NL+LEY +P ++ + +L + +I
Sbjct: 98 KAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYI 157
Query: 129 HDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAK--------RSRHCKRQKFDPSMRG 180
H G H D+KP N+LL SG V K+ D G AK S C R
Sbjct: 158 HSIGICHRDIKPQNLLL-DPPSG--VLKLIDFGSAKILIAGEPNVSXICSR--------- 205
Query: 181 TPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIG----- 234
Y APE + + DIW+ GCV+ E++ G+ + + IDQL II
Sbjct: 206 --YYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLF--PGESGIDQLVEIIKVLGTP 261
Query: 235 ------------DEHSLPEI-PSRVSK--------EARDFLRRCFVRKPAFRFTAEMLLD 273
EH P+I P SK +A D + R P+ R TA L
Sbjct: 262 SREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321
Query: 274 DPFVKGVDEELSRELEGDYSQGEVTLSNADAE--SCSPECIS-FIPLEANSSLSSWG 327
PF DE + E + L N E S P+ IS +P A + L S G
Sbjct: 322 HPF---FDELRTGEARMPNGRELPPLFNWTKEELSVRPDLISRLVPQHAEAELLSRG 375
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 118/269 (43%), Gaps = 15/269 (5%)
Query: 12 RVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLECF 71
R +G G+FG V + + +S+ ++ E EV +L+ P +++ F
Sbjct: 28 RKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDH-PNIIKIF 86
Query: 72 GEEITMGENGEMAYNLLLEYAAGGTLGDLI--EKCNGNGLPEKDVRHFTRCILEGIGHIH 129
+ E+ Y +++E GG L + I + G L E V + ++ + + H
Sbjct: 87 ----EVFEDYHNMY-IVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH 141
Query: 130 DSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPET 189
VH D+KP+NIL T + KI D G+A+ K + + GT LY+APE
Sbjct: 142 SQHVVHKDLKPENILFQDTSPHSPI-KIIDFGLAEL---FKSDEHSTNAAGTALYMAPE- 196
Query: 190 VVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKE 249
V + DIW+ G V+ +L+G + + Q + +++ P ++ +
Sbjct: 197 VFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRP--LTPQ 254
Query: 250 ARDFLRRCFVRKPAFRFTAEMLLDDPFVK 278
A D L++ + P R +A +L + K
Sbjct: 255 AVDLLKQMLTKDPERRPSAAQVLHHEWFK 283
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 8/138 (5%)
Query: 99 DLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIA 158
DL + L + +F IL G+ +IH + +H D+KP N+LL T KI
Sbjct: 109 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD----LKIC 164
Query: 159 DLGVAKRSR-HCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQ 216
D G+A+ + F T Y APE ++ S DIW++GC++ EMLS R
Sbjct: 165 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 224
Query: 217 AWVVKEDCSIDQLFSIIG 234
+ K +DQL I+G
Sbjct: 225 IFPGKH--YLDQLNHILG 240
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 19/174 (10%)
Query: 108 GLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSR 167
L E+ R F +LE + H H+ G +H D+K +NI L+ G+ K+ D G +
Sbjct: 139 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI-LIDLNRGEL--KLIDFGSGALLK 195
Query: 168 HCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSI 226
FD GT +Y PE + H S +W+LG ++ +M+ G + E+
Sbjct: 196 DTVYTDFD----GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIG 251
Query: 227 DQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGV 280
Q+F RVS E + +R C +P+ R T E + + P+++ V
Sbjct: 252 GQVF-----------FRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 294
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 127/288 (44%), Gaps = 37/288 (12%)
Query: 12 RVIGQGSFGCVF-IAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNL---NGCPFV 67
R+IG+G FG V+ K + + + L + + +L CPF+
Sbjct: 195 RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFI 254
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGL-PEKDVRHFTRCILEGIG 126
+ C + + +L+ GG DL + +G+ E D+R + I+ G+
Sbjct: 255 V-CMSYAFHTPDK----LSFILDLMNGG---DLHYHLSQHGVFSEADMRFYAAEIILGLE 306
Query: 127 HIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMR-GTPLYL 185
H+H+ V+ D+KP NILL + G +I+DLG+A C K P GT Y+
Sbjct: 307 HMHNRFVVYRDLKPANILL--DEHGH--VRISDLGLA-----CDFSKKKPHASVGTHGYM 357
Query: 186 APETVVQHM-QEAPSDIWALGCVVLEMLSGRQAW---VVKEDCSIDQLFSIIGDEHSLPE 241
APE + + + ++ +D ++LGC++ ++L G + K+ ID++ + E
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA-----VE 412
Query: 242 IPSRVSKEARDFLRRCFVRKPAFRF-----TAEMLLDDPFVKGVDEEL 284
+P S E R L R R A+ + + PF + +D ++
Sbjct: 413 LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQM 460
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 8/138 (5%)
Query: 99 DLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIA 158
DL + L + +F IL G+ +IH + +H D+KP N+LL T KI
Sbjct: 116 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD----LKIC 171
Query: 159 DLGVAKRSR-HCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQ 216
D G+A+ + F T Y APE ++ S DIW++GC++ EMLS R
Sbjct: 172 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 231
Query: 217 AWVVKEDCSIDQLFSIIG 234
+ K +DQL I+G
Sbjct: 232 IFPGKH--YLDQLNHILG 247
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 127/288 (44%), Gaps = 37/288 (12%)
Query: 12 RVIGQGSFGCVF-IAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNL---NGCPFV 67
R+IG+G FG V+ K + + + L + + +L CPF+
Sbjct: 195 RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFI 254
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGL-PEKDVRHFTRCILEGIG 126
+ C + + +L+ GG DL + +G+ E D+R + I+ G+
Sbjct: 255 V-CMSYAFHTPDK----LSFILDLMNGG---DLHYHLSQHGVFSEADMRFYAAEIILGLE 306
Query: 127 HIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMR-GTPLYL 185
H+H+ V+ D+KP NILL + G +I+DLG+A C K P GT Y+
Sbjct: 307 HMHNRFVVYRDLKPANILL--DEHGH--VRISDLGLA-----CDFSKKKPHASVGTHGYM 357
Query: 186 APETVVQHM-QEAPSDIWALGCVVLEMLSGRQAW---VVKEDCSIDQLFSIIGDEHSLPE 241
APE + + + ++ +D ++LGC++ ++L G + K+ ID++ + E
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA-----VE 412
Query: 242 IPSRVSKEARDFLRRCFVRKPAFRF-----TAEMLLDDPFVKGVDEEL 284
+P S E R L R R A+ + + PF + +D ++
Sbjct: 413 LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQM 460
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 8/138 (5%)
Query: 99 DLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIA 158
DL + L + +F IL G+ +IH + +H D+KP N+LL T KI
Sbjct: 117 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD----LKIC 172
Query: 159 DLGVAKRSR-HCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQ 216
D G+A+ + F T Y APE ++ S DIW++GC++ EMLS R
Sbjct: 173 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 232
Query: 217 AWVVKEDCSIDQLFSIIG 234
+ K +DQL I+G
Sbjct: 233 IFPGKH--YLDQLNHILG 248
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 8/138 (5%)
Query: 99 DLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIA 158
DL + L + +F IL G+ +IH + +H D+KP N+LL T KI
Sbjct: 108 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD----LKIC 163
Query: 159 DLGVAKRSR-HCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQ 216
D G+A+ + F T Y APE ++ S DIW++GC++ EMLS R
Sbjct: 164 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 223
Query: 217 AWVVKEDCSIDQLFSIIG 234
+ K +DQL I+G
Sbjct: 224 IFPGKH--YLDQLNHILG 239
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 8/138 (5%)
Query: 99 DLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIA 158
DL + L + +F IL G+ +IH + +H D+KP N+LL T KI
Sbjct: 115 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD----LKIC 170
Query: 159 DLGVAKRSR-HCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQ 216
D G+A+ + F T Y APE ++ S DIW++GC++ EMLS R
Sbjct: 171 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 230
Query: 217 AWVVKEDCSIDQLFSIIG 234
+ K +DQL I+G
Sbjct: 231 IFPGKH--YLDQLNHILG 246
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 64/131 (48%), Gaps = 9/131 (6%)
Query: 87 LLLEYAAGGTLGDLIEKC-NGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILL 145
L +EY GG L + + N GL E +R I + ++H++ +H D+KP+NI+L
Sbjct: 95 LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVL 154
Query: 146 VATQSG--KFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWA 203
Q G + + KI DLG AK + + GT YLAPE + Q D W+
Sbjct: 155 ---QPGPQRLIHKIIDLGYAK---ELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWS 208
Query: 204 LGCVVLEMLSG 214
G + E ++G
Sbjct: 209 FGTLAFECITG 219
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 115 LVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 169
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI D G+A+ + D M G T Y APE ++ M + DIW+
Sbjct: 170 NEDXEL--KILDFGLARHT--------DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 219
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 220 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLT 274
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 275 QMPKMNFANVFIGANPLAVDLLEKM 299
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 8/138 (5%)
Query: 99 DLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIA 158
DL + L + +F IL G+ +IH + +H D+KP N+LL T KI
Sbjct: 109 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD----LKIC 164
Query: 159 DLGVAKRSR-HCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQ 216
D G+A+ + F T Y APE ++ S DIW++GC++ EMLS R
Sbjct: 165 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 224
Query: 217 AWVVKEDCSIDQLFSIIG 234
+ K +DQL I+G
Sbjct: 225 IFPGKH--YLDQLNHILG 240
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 97/223 (43%), Gaps = 27/223 (12%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILE---GIGHIHD---SGYVHCDVKP 140
L++EYA GG+L +++ LP H L+ G+ ++H +H D+KP
Sbjct: 76 LVMEYAEGGSLYNVLH--GAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKP 133
Query: 141 DNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSD 200
N+LLVA G V KI D G A C Q + +G+ ++APE D
Sbjct: 134 PNLLLVA---GGTVLKICDFGTA-----CDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCD 185
Query: 201 IWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEH--SLPEIPSRVSKEARDFLRRCF 258
+++ G ++ E+++ R+ + D F I+ H + P + + K + RC+
Sbjct: 186 VFSWGIILWEVITRRKPF----DEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCW 241
Query: 259 VRKPAFRFTAEMLLDD-----PFVKGVDEELSRELEGDYSQGE 296
+ P+ R + E ++ + G DE L + GE
Sbjct: 242 SKDPSQRPSMEEIVKIMTHLMRYFPGADEPLQYPCQHSLPPGE 284
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 109 LVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 163
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI D G+A+ + D M G T Y APE ++ M + DIW+
Sbjct: 164 NEDXEL--KILDFGLARHT--------DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 213
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 214 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLT 268
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 269 QMPKMNFANVFIGANPLAVDLLEKM 293
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 19/174 (10%)
Query: 108 GLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSR 167
L E+ R F +LE + H H+ G +H D+K +NI L+ G+ K+ D G +
Sbjct: 138 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI-LIDLNRGEL--KLIDFGSGALLK 194
Query: 168 HCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSI 226
FD GT +Y PE + H S +W+LG ++ +M+ G + E+
Sbjct: 195 DTVYTDFD----GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIG 250
Query: 227 DQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGV 280
Q+F RVS E + +R C +P+ R T E + + P+++ V
Sbjct: 251 GQVF-----------FRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 293
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 8/138 (5%)
Query: 99 DLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIA 158
DL + L + +F IL G+ +IH + +H D+KP N+LL T KI
Sbjct: 111 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD----LKIC 166
Query: 159 DLGVAKRSR-HCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQ 216
D G+A+ + F T Y APE ++ S DIW++GC++ EMLS R
Sbjct: 167 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 226
Query: 217 AWVVKEDCSIDQLFSIIG 234
+ K +DQL I+G
Sbjct: 227 IFPGKH--YLDQLNHILG 242
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 19/174 (10%)
Query: 108 GLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSR 167
L E+ R F +LE + H H+ G +H D+K +NI L+ G+ K+ D G +
Sbjct: 139 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI-LIDLNRGEL--KLIDFGSGALLK 195
Query: 168 HCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSI 226
FD GT +Y PE + H S +W+LG ++ +M+ G + E+
Sbjct: 196 DTVYTDFD----GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIG 251
Query: 227 DQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGV 280
Q+F RVS E + +R C +P+ R T E + + P+++ V
Sbjct: 252 GQVF-----------FRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 294
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 64/131 (48%), Gaps = 9/131 (6%)
Query: 87 LLLEYAAGGTLGDLIEKC-NGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILL 145
L +EY GG L + + N GL E +R I + ++H++ +H D+KP+NI+L
Sbjct: 96 LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVL 155
Query: 146 VATQSG--KFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWA 203
Q G + + KI DLG AK + + GT YLAPE + Q D W+
Sbjct: 156 ---QPGPQRLIHKIIDLGYAK---ELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWS 209
Query: 204 LGCVVLEMLSG 214
G + E ++G
Sbjct: 210 FGTLAFECITG 220
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 8/138 (5%)
Query: 99 DLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIA 158
DL + L + +F IL G+ +IH + +H D+KP N+LL T KI
Sbjct: 131 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD----LKIC 186
Query: 159 DLGVAKRSR-HCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQ 216
D G+A+ + F T Y APE ++ S DIW++GC++ EMLS R
Sbjct: 187 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 246
Query: 217 AWVVKEDCSIDQLFSIIG 234
+ K +DQL I+G
Sbjct: 247 IFPGKH--YLDQLNHILG 262
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 109 LVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 163
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI D G+A+ + D M G T Y APE ++ M + DIW+
Sbjct: 164 NEDXEL--KILDFGLARHT--------DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 213
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 214 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLT 268
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 269 QMPKMNFANVFIGANPLAVDLLEKM 293
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 78/174 (44%), Gaps = 19/174 (10%)
Query: 108 GLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSR 167
L E+ R F +LE + H H+ G +H D+K +NI L+ G+ K+ D G +
Sbjct: 126 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI-LIDLNRGEL--KLIDFGSGALLK 182
Query: 168 HCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSI 226
FD GT +Y PE + H S +W+LG ++ +M+ G + E+
Sbjct: 183 DTVYTDFD----GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 238
Query: 227 DQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGV 280
Q+F RVS E + +R C +P R T E + + P+++ V
Sbjct: 239 GQVF-----------FRQRVSXECQHLIRWCLALRPXDRPTFEEIQNHPWMQDV 281
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 8/138 (5%)
Query: 99 DLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIA 158
DL + L + +F IL G+ +IH + +H D+KP N+LL T KI
Sbjct: 115 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD----LKIC 170
Query: 159 DLGVAKRSR-HCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQ 216
D G+A+ + F T Y APE ++ S DIW++GC++ EMLS R
Sbjct: 171 DFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 230
Query: 217 AWVVKEDCSIDQLFSIIG 234
+ K +DQL I+G
Sbjct: 231 IFPGKH--YLDQLNHILG 246
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 88/170 (51%), Gaps = 27/170 (15%)
Query: 94 GGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKF 153
G L +++ KC L ++ V+ +L G+ +IH +G +H D+KP N+ + +
Sbjct: 108 GADLNNIV-KCQA--LSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAV----NEDC 160
Query: 154 VAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWALGCVVL 209
+I D G+A+++ D M G T Y APE ++ M + DIW++GC++
Sbjct: 161 ELRILDFGLARQA--------DEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 212
Query: 210 EMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLR 255
E+L G+ + + IDQL ++G PE+ +++S E AR +++
Sbjct: 213 ELLQGKALFPGSD--YIDQLKRIMEVVGTPS--PEVLAKISSEHARTYIQ 258
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 8/138 (5%)
Query: 99 DLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIA 158
DL + L + +F IL G+ +IH + +H D+KP N+LL T KI
Sbjct: 116 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD----LKIC 171
Query: 159 DLGVAKRSR-HCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQ 216
D G+A+ + F T Y APE ++ S DIW++GC++ EMLS R
Sbjct: 172 DFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 231
Query: 217 AWVVKEDCSIDQLFSIIG 234
+ K +DQL I+G
Sbjct: 232 IFPGKH--YLDQLNHILG 247
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 115/272 (42%), Gaps = 25/272 (9%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSSF--LPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVL 68
GR +G+G FG V++A+ K + L L L++E E+ +L+ P +L
Sbjct: 28 GRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH-PNIL 86
Query: 69 ECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEK-CNGNGLPEKDVRHFTRCILEGIGH 127
+ + Y L+LEYA G L ++K C + E+ + + + +
Sbjct: 87 RLYN----YFYDRRRIY-LILEYAPRGELYKELQKSCTFD---EQRTATIMEELADALMY 138
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
H +H D+KP+N K KIAD G + + +R+ +M GT YL P
Sbjct: 139 CHGKKVIHRDIKPEN----LLLGLKGELKIADFGWSVHAPSLRRK----TMCGTLDYLPP 190
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E + M D+W +G + E+L G + E S ++ + I + P+ V
Sbjct: 191 EMIEGRMHNEKVDLWCIGVLCYELLVGNPPF---ESASHNETYRRIVKVDL--KFPASVP 245
Query: 248 KEARDFLRRCFVRKPAFRFTAEMLLDDPFVKG 279
A+D + + P+ R + P+V+
Sbjct: 246 TGAQDLISKLLRHNPSERLPLAQVSAHPWVRA 277
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 94/232 (40%), Gaps = 14/232 (6%)
Query: 52 QKEKEVFDNLNGCPFVLECFGEEITMGEN---GEMAYNLLLEYAAGGTLGDLIEKCNGNG 108
++E E+ + CP ++ + + EN G ++ E GG L I+
Sbjct: 102 RREVELHWRASQCPHIVRI----VDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQA 157
Query: 109 LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
E++ + I E I ++H H DVKP+N LL ++ + K+ D G AK +
Sbjct: 158 FTEREASEIXKSIGEAIQYLHSINIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETT- 215
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSID- 227
P TP Y+APE + + D W+LG + +L G + +I
Sbjct: 216 SHNSLTTPCY--TPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISP 273
Query: 228 -QLFSIIGDEHSLPEIP-SRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
I ++ P S VS+E + +R +P R T + P++
Sbjct: 274 GXKTRIRXGQYEFPNPEWSEVSEEVKXLIRNLLKTEPTQRXTITEFXNHPWI 325
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 127 LVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 181
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI D G+A+ + D M G T Y APE ++ M + DIW+
Sbjct: 182 NEDCEL--KILDFGLARHT--------DDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWS 231
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 232 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLT 286
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 287 QMPKMNFANVFIGANPLAVDLLEKM 311
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 93/194 (47%), Gaps = 17/194 (8%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYV---HCDVKPDNI 143
L++E+A GG L ++ +G +P + ++ I G+ ++HD V H D+K NI
Sbjct: 83 LVMEFARGGPLNRVL---SGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNI 139
Query: 144 LLV-ATQSGKF---VAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS 199
L++ ++G + KI D G+A+ + S G ++APE + M S
Sbjct: 140 LILQKVENGDLSNKILKITDFGLAREWHRTTKM----SAAGAYAWMAPEVIRASMFSKGS 195
Query: 200 DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFV 259
D+W+ G ++ E+L+G + + ++ + + ++ +LP IPS + + C+
Sbjct: 196 DVWSYGVLLWELLTGEVPFRGIDGLAVA--YGVAMNKLALP-IPSTCPEPFAKLMEDCWN 252
Query: 260 RKPAFRFTAEMLLD 273
P R + +LD
Sbjct: 253 PDPHSRPSFTNILD 266
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 123/286 (43%), Gaps = 35/286 (12%)
Query: 11 GRVIGQGSFGCVFIA------KPKSNS-SFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNG 63
G+ +G+G+FG V +A K K N + + M L E E+ +
Sbjct: 22 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 81
Query: 64 CPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGL---------PE--- 111
++ G ++G + +++EYA+ G L + ++ GL PE
Sbjct: 82 HKNIINLLG---ACTQDGPLY--VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 136
Query: 112 --KDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHC 169
KD+ + G+ ++ +H D+ N+L+ V KIAD G+A+ H
Sbjct: 137 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN----VMKIADFGLARDIHHI 192
Query: 170 KRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSIDQ 228
K + R ++APE + + SD+W+ G ++ E+ + G + +++
Sbjct: 193 DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY---PGVPVEE 249
Query: 229 LFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDD 274
LF ++ + H + + PS + E +R C+ P+ R T + L++D
Sbjct: 250 LFKLLKEGHRM-DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 294
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 123/286 (43%), Gaps = 35/286 (12%)
Query: 11 GRVIGQGSFGCVFIA------KPKSNS-SFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNG 63
G+ +G+G+FG V +A K K N + + M L E E+ +
Sbjct: 33 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 64 CPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGL---------PE--- 111
++ G ++G + +++EYA+ G L + ++ GL PE
Sbjct: 93 HKNIINLLG---ACTQDGPLY--VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 147
Query: 112 --KDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHC 169
KD+ + G+ ++ +H D+ N+L+ V KIAD G+A+ H
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN----VMKIADFGLARDIHHI 203
Query: 170 KRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSIDQ 228
K + R ++APE + + SD+W+ G ++ E+ + G + +++
Sbjct: 204 DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY---PGVPVEE 260
Query: 229 LFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDD 274
LF ++ + H + + PS + E +R C+ P+ R T + L++D
Sbjct: 261 LFKLLKEGHRM-DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 305
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 123/286 (43%), Gaps = 35/286 (12%)
Query: 11 GRVIGQGSFGCVFIA------KPKSNS-SFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNG 63
G+ +G+G+FG V +A K K N + + M L E E+ +
Sbjct: 26 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 85
Query: 64 CPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGL---------PE--- 111
++ G ++G + +++EYA+ G L + ++ GL PE
Sbjct: 86 HKNIINLLG---ACTQDGPLY--VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 140
Query: 112 --KDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHC 169
KD+ + G+ ++ +H D+ N+L+ V KIAD G+A+ H
Sbjct: 141 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN----VMKIADFGLARDIHHI 196
Query: 170 KRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSIDQ 228
K + R ++APE + + SD+W+ G ++ E+ + G + +++
Sbjct: 197 DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY---PGVPVEE 253
Query: 229 LFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDD 274
LF ++ + H + + PS + E +R C+ P+ R T + L++D
Sbjct: 254 LFKLLKEGHRM-DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 298
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 123/286 (43%), Gaps = 35/286 (12%)
Query: 11 GRVIGQGSFGCVFIA------KPKSNS-SFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNG 63
G+ +G+G+FG V +A K K N + + M L E E+ +
Sbjct: 74 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 133
Query: 64 CPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGL---------PE--- 111
++ G ++G + +++EYA+ G L + ++ GL PE
Sbjct: 134 HKNIINLLG---ACTQDGPLY--VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 188
Query: 112 --KDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHC 169
KD+ + G+ ++ +H D+ N+L+ V KIAD G+A+ H
Sbjct: 189 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN----VMKIADFGLARDIHHI 244
Query: 170 KRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSIDQ 228
K + R ++APE + + SD+W+ G ++ E+ + G + +++
Sbjct: 245 DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY---PGVPVEE 301
Query: 229 LFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDD 274
LF ++ + H + + PS + E +R C+ P+ R T + L++D
Sbjct: 302 LFKLLKEGHRM-DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 346
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 123/286 (43%), Gaps = 35/286 (12%)
Query: 11 GRVIGQGSFGCVFIA------KPKSNS-SFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNG 63
G+ +G+G+FG V +A K K N + + M L E E+ +
Sbjct: 33 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 64 CPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGL---------PE--- 111
++ G ++G + +++EYA+ G L + ++ GL PE
Sbjct: 93 HKNIINLLG---ACTQDGPLY--VIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQL 147
Query: 112 --KDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHC 169
KD+ + G+ ++ +H D+ N+L+ V KIAD G+A+ H
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN----VMKIADFGLARDIHHI 203
Query: 170 KRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSIDQ 228
K + R ++APE + + SD+W+ G ++ E+ + G + +++
Sbjct: 204 DXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY---PGVPVEE 260
Query: 229 LFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDD 274
LF ++ + H + + PS + E +R C+ P+ R T + L++D
Sbjct: 261 LFKLLKEGHRM-DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 305
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 123/286 (43%), Gaps = 35/286 (12%)
Query: 11 GRVIGQGSFGCVFIA------KPKSNS-SFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNG 63
G+ +G+G+FG V +A K K N + + M L E E+ +
Sbjct: 33 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 64 CPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGL---------PE--- 111
++ G ++G + +++EYA+ G L + ++ GL PE
Sbjct: 93 HKNIINLLG---ACTQDGPLY--VIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQL 147
Query: 112 --KDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHC 169
KD+ + G+ ++ +H D+ N+L+ V KIAD G+A+ H
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN----VMKIADFGLARDIHHI 203
Query: 170 KRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSIDQ 228
K + R ++APE + + SD+W+ G ++ E+ + G + +++
Sbjct: 204 DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY---PGVPVEE 260
Query: 229 LFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDD 274
LF ++ + H + + PS + E +R C+ P+ R T + L++D
Sbjct: 261 LFKLLKEGHRM-DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 305
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 123/286 (43%), Gaps = 35/286 (12%)
Query: 11 GRVIGQGSFGCVFIA------KPKSNS-SFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNG 63
G+ +G+G+FG V +A K K N + + M L E E+ +
Sbjct: 25 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 84
Query: 64 CPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGL---------PE--- 111
++ G ++G + +++EYA+ G L + ++ GL PE
Sbjct: 85 HKNIINLLG---ACTQDGPLY--VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 139
Query: 112 --KDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHC 169
KD+ + G+ ++ +H D+ N+L+ V KIAD G+A+ H
Sbjct: 140 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN----VMKIADFGLARDIHHI 195
Query: 170 KRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSIDQ 228
K + R ++APE + + SD+W+ G ++ E+ + G + +++
Sbjct: 196 DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY---PGVPVEE 252
Query: 229 LFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDD 274
LF ++ + H + + PS + E +R C+ P+ R T + L++D
Sbjct: 253 LFKLLKEGHRM-DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 297
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 8/138 (5%)
Query: 99 DLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIA 158
DL + L + +F IL G+ +IH + +H D+KP N+LL T KI
Sbjct: 115 DLYKLLKCQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD----LKIC 170
Query: 159 DLGVAKRSR-HCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQ 216
D G+A+ + F T Y APE ++ S DIW++GC++ EMLS R
Sbjct: 171 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 230
Query: 217 AWVVKEDCSIDQLFSIIG 234
+ K +DQL I+G
Sbjct: 231 IFPGKH--YLDQLNHILG 246
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 104 LVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 158
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI D G+A+ + D M G T Y APE ++ M + DIW+
Sbjct: 159 NEDCEL--KILDFGLARHT--------DDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWS 208
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 209 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLT 263
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKM 288
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 116 LVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 170
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI D G+A+ + D M G T Y APE ++ M + DIW+
Sbjct: 171 NEDCEL--KILDFGLARHT--------DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 220
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 221 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLT 275
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 276 QMPKMNFANVFIGANPLAVDLLEKM 300
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 123/286 (43%), Gaps = 35/286 (12%)
Query: 11 GRVIGQGSFGCVFIA------KPKSNS-SFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNG 63
G+ +G+G+FG V +A K K N + + M L E E+ +
Sbjct: 18 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 77
Query: 64 CPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGL---------PE--- 111
++ G ++G + +++EYA+ G L + ++ GL PE
Sbjct: 78 HKNIINLLG---ACTQDGPLY--VIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQL 132
Query: 112 --KDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHC 169
KD+ + G+ ++ +H D+ N+L+ V KIAD G+A+ H
Sbjct: 133 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN----VMKIADFGLARDIHHI 188
Query: 170 KRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSIDQ 228
K + R ++APE + + SD+W+ G ++ E+ + G + +++
Sbjct: 189 DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY---PGVPVEE 245
Query: 229 LFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDD 274
LF ++ + H + + PS + E +R C+ P+ R T + L++D
Sbjct: 246 LFKLLKEGHRM-DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 290
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 116 LVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 170
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI D G+A+ + D M G T Y APE ++ M + DIW+
Sbjct: 171 NEDCEL--KILDFGLARHT--------DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 220
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 221 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLT 275
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 276 QMPKMNFANVFIGANPLAVDLLEKM 300
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 111 LVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 165
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI D G+A+ + D M G T Y APE ++ M + DIW+
Sbjct: 166 NEDCEL--KILDFGLARHT--------DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 215
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 216 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLT 270
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 271 QMPKMNFANVFIGANPLAVDLLEKM 295
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 116 LVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 170
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI D G+A+ + D M G T Y APE ++ M + DIW+
Sbjct: 171 NEDCEL--KILDFGLARHT--------DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 220
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 221 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLT 275
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 276 QMPKMNFANVFIGANPLAVDLLEKM 300
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 104 LVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 158
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI D G+A+ + D M G T Y APE ++ M + DIW+
Sbjct: 159 NEDCEL--KILDFGLARHT--------DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 209 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLT 263
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKM 288
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 104 LVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 158
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI D G+A+ + D M G T Y APE ++ M + DIW+
Sbjct: 159 NEDCEL--KILDFGLARHT--------DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 209 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLT 263
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKM 288
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 106 LVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 160
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI D G+A+ + D M G T Y APE ++ M + DIW+
Sbjct: 161 NEDCEL--KILDFGLARHT--------DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 210
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 211 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLT 265
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 266 QMPKMNFANVFIGANPLAVDLLEKM 290
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 110 LVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 164
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI D G+A+ + D M G T Y APE ++ M + DIW+
Sbjct: 165 NEDCEL--KILDFGLARHT--------DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 214
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 215 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLT 269
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 270 QMPKMNFANVFIGANPLAVDLLEKM 294
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 127 LVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 181
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI D G+A+ + D M G T Y APE ++ M + DIW+
Sbjct: 182 NEDCEL--KILDFGLARHT--------DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 231
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 232 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLT 286
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 287 QMPKMNFANVFIGANPLAVDLLEKM 311
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 104 LVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 158
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI D G+A+ + D M G T Y APE ++ M + DIW+
Sbjct: 159 NEDCEL--KILDFGLARHT--------DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 209 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLT 263
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKM 288
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 104 LVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 158
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI D G+A+ + D M G T Y APE ++ M + DIW+
Sbjct: 159 NEDCEL--KILDFGLARHT--------DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 209 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLT 263
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKM 288
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 102 LVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 156
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI D G+A+ + D M G T Y APE ++ M + DIW+
Sbjct: 157 NEDCEL--KILDFGLARHT--------DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 206
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 207 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLT 261
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 262 QMPKMNFANVFIGANPLAVDLLEKM 286
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 106 LVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 160
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI D G+A+ + D M G T Y APE ++ M + DIW+
Sbjct: 161 NEDCEL--KILDFGLARHT--------DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 210
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 211 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLT 265
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 266 QMPKMNFANVFIGANPLAVDLLEKM 290
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 104 LVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 158
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI D G+A+ + D M G T Y APE ++ M + DIW+
Sbjct: 159 NEDCEL--KILDFGLARHT--------DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 209 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLT 263
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKM 288
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 104 LVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 158
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI D G+A+ + D M G T Y APE ++ M + DIW+
Sbjct: 159 NEDCEL--KILDFGLARHT--------DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 209 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLT 263
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKM 288
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 115 LVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 169
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI D G+A+ + D M G T Y APE ++ M + DIW+
Sbjct: 170 NEDCEL--KILDFGLARHT--------DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 219
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 220 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLT 274
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 275 QMPKMNFANVFIGANPLAVDLLEKM 299
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 100 LVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 154
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI D G+A+ + D M G T Y APE ++ M + DIW+
Sbjct: 155 NEDCEL--KILDFGLARHT--------DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 204
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 205 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLT 259
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 260 QMPKMNFANVFIGANPLAVDLLEKM 284
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 106 LVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 160
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI D G+A+ + D M G T Y APE ++ M + DIW+
Sbjct: 161 NEDCEL--KILDFGLARHT--------DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 210
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 211 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLT 265
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 266 QMPKMNFANVFIGANPLAVDLLEKM 290
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 109 LVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 163
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI D G+A+ + D M G T Y APE ++ M + DIW+
Sbjct: 164 NEDCEL--KILDFGLARHT--------DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 213
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 214 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLT 268
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 269 QMPKMNFANVFIGANPLAVDLLEKM 293
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 109 LVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 163
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI D G+A+ + D M G T Y APE ++ M + DIW+
Sbjct: 164 NEDCEL--KILDFGLARHT--------DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 213
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 214 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLT 268
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 269 QMPKMNFANVFIGANPLAVDLLEKM 293
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 103 LVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 157
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI D G+A+ + D M G T Y APE ++ M + DIW+
Sbjct: 158 NEDCEL--KILDFGLARHT--------DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 207
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 208 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLT 262
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 263 QMPKMNFANVFIGANPLAVDLLEKM 287
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 104 LVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 158
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI D G+A+ + D M G T Y APE ++ M + DIW+
Sbjct: 159 NEDCEL--KILDFGLARHT--------DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 209 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLT 263
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKM 288
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 101 LVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 155
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI D G+A+ + D M G T Y APE ++ M + DIW+
Sbjct: 156 NEDCEL--KILDFGLARHT--------DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 205
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 206 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLT 260
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 261 QMPKMNFANVFIGANPLAVDLLEKM 285
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 123/286 (43%), Gaps = 35/286 (12%)
Query: 11 GRVIGQGSFGCVFIA------KPKSNS-SFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNG 63
G+ +G+G+FG V +A K K N + + M L E E+ +
Sbjct: 33 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 64 CPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGL---------PE--- 111
++ G ++G + +++EYA+ G L + ++ GL PE
Sbjct: 93 HKNIINLLG---ACTQDGPLY--VIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQL 147
Query: 112 --KDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHC 169
KD+ + G+ ++ +H D+ N+L+ V KIAD G+A+ H
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN----VMKIADFGLARDIHHI 203
Query: 170 KRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSIDQ 228
K + R ++APE + + SD+W+ G ++ E+ + G + +++
Sbjct: 204 DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY---PGVPVEE 260
Query: 229 LFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDD 274
LF ++ + H + + PS + E +R C+ P+ R T + L++D
Sbjct: 261 LFKLLKEGHRM-DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 305
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 123 LVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 177
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI D G+A+ + D M G T Y APE ++ M + DIW+
Sbjct: 178 NEDCEL--KILDFGLARHT--------DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 227
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 228 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLT 282
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 283 QMPKMNFANVFIGANPLAVDLLEKM 307
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 104 LVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 158
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI D G+A+ + D M G T Y APE ++ M + DIW+
Sbjct: 159 NEDCEL--KILDFGLARHT--------DDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 209 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLT 263
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKM 288
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 124 LVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 178
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI D G+A+ + D M G T Y APE ++ M + DIW+
Sbjct: 179 NEDCEL--KILDFGLARHT--------DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 228
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 229 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLT 283
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 284 QMPKMNFANVFIGANPLAVDLLEKM 308
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 101 LVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 155
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI D G+A+ + D M G T Y APE ++ M + DIW+
Sbjct: 156 NEDCEL--KILDFGLARHT--------DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 205
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 206 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLT 260
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 261 QMPKMNFANVFIGANPLAVDLLEKM 285
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 104 LVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 158
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI D G+A+ + D M G T Y APE ++ M + DIW+
Sbjct: 159 NEDCEL--KILDFGLARHT--------DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 209 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLA 263
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKM 288
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 104 LVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 158
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI D G+A+ + D M G T Y APE ++ M + DIW+
Sbjct: 159 NEDCEL--KILDFGLARHT--------DDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 209 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLT 263
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKM 288
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 124 LVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 178
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI D G+A+ + D M G T Y APE ++ M + DIW+
Sbjct: 179 NEDCEL--KILDFGLARHT--------DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 228
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 229 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLA 283
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 284 QMPKMNFANVFIGANPLAVDLLEKM 308
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 114 LVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 168
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI D G+A+ + D M G T Y APE ++ M + DIW+
Sbjct: 169 NEDCEL--KILDFGLARHT--------DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 218
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 219 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLA 273
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 274 QMPKMNFANVFIGANPLAVDLLEKM 298
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 71/181 (39%), Gaps = 30/181 (16%)
Query: 106 GNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKF--VAKIADLGVA 163
G LPE V + R L + H+H G VH DVKP NI L K + +LG A
Sbjct: 151 GASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA 210
Query: 164 KRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEML------SGRQA 217
G P Y+APE ++Q +D+++LG +LE+ G +
Sbjct: 211 GAGE---------VQEGDPRYMAPE-LLQGSYGTAADVFSLGLTILEVACNMELPHGGEG 260
Query: 218 WVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
W + PE + +S E R L P R TAE LL P +
Sbjct: 261 WQQLRQGYLP------------PEFTAGLSSELRSVLVMMLEPDPKLRATAEALLALPVL 308
Query: 278 K 278
+
Sbjct: 309 R 309
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 100 LVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 154
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI D G+A+ + D M G T Y APE ++ M + DIW+
Sbjct: 155 NEDCEL--KILDFGLARHT--------DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 204
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 205 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLA 259
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 260 QMPKMNFANVFIGANPLAVDLLEKM 284
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 123 LVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 177
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI D G+A+ + D M G T Y APE ++ M + DIW+
Sbjct: 178 NEDCEL--KILDFGLARHT--------DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 227
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 228 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLA 282
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 283 QMPKMNFANVFIGANPLAVDLLEKM 307
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 124 LVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 178
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI D G+A+ + D M G T Y APE ++ M + DIW+
Sbjct: 179 NEDCEL--KILDFGLARHT--------DDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWS 228
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 229 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLA 283
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 284 QMPKMNFANVFIGANPLAVDLLEKM 308
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 106/260 (40%), Gaps = 28/260 (10%)
Query: 13 VIGQGSFGCVFIAKPKSNSSF--LPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLEC 70
V+G+GSFG V +++ K + L EK V PF+ +
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 407
Query: 71 FGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHD 130
TM ++EY GG L I++ E + I G+ +
Sbjct: 408 HSCFQTMDR-----LYFVMEYVNGGDLMYHIQQVGR--FKEPHAVFYAAEIAIGLFFLQS 460
Query: 131 SGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFD----PSMRGTPLYLA 186
G ++ D+K DN++L + KIAD G+ CK +D GTP Y+A
Sbjct: 461 KGIIYRDLKLDNVMLDSEGH----IKIADFGM------CKENIWDGVTTKXFCGTPDYIA 510
Query: 187 PETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRV 246
PE + D WA G ++ EML+G+ + +++ D+LF I EH++ P +
Sbjct: 511 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE---DELFQSIM-EHNV-AYPKSM 565
Query: 247 SKEARDFLRRCFVRKPAFRF 266
SKEA + + P R
Sbjct: 566 SKEAVAICKGLMTKHPGKRL 585
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 9/127 (7%)
Query: 98 GDLIEKCNGNGLPEKDVRHFTR---CI--LEGIGHIHDSGYVHCDVKPDNILLVATQSGK 152
G+L G+ LP + R CI G+ ++H +H DVK NILL
Sbjct: 120 GNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILL----DEN 175
Query: 153 FVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEML 212
FV KI D G++K+ + ++GT Y+ PE ++ SD+++ G V+ E+L
Sbjct: 176 FVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL 235
Query: 213 SGRQAWV 219
R A V
Sbjct: 236 CARSAIV 242
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 110 LVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 164
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI D G+A+ + D M G T Y APE ++ M + DIW+
Sbjct: 165 NEDCEL--KILDFGLARHT--------DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 214
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 215 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLT 269
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 270 QMPKMNFANVFIGANPLAVDLLEKM 294
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 104 LVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 158
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI D G+A+ + D M G T Y APE ++ M + DIW+
Sbjct: 159 NEDCEL--KILDYGLARHT--------DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 209 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLT 263
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKM 288
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 104 LVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 158
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI D G+A+ + D M G T Y APE ++ M + DIW+
Sbjct: 159 NEDCEL--KILDFGLARHT--------DDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 209 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLA 263
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKM 288
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 110 LVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 164
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI D G+A+ + D M G T Y APE ++ M + DIW+
Sbjct: 165 NEDCEL--KILDFGLARHT--------DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 214
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 215 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLA 269
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 270 QMPKMNFANVFIGANPLAVDLLEKM 294
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 100 LVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 154
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI D G+A+ + D M G T Y APE ++ M + DIW+
Sbjct: 155 NEDCEL--KILDFGLARHT--------DDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWS 204
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 205 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLA 259
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 260 QMPKMNFANVFIGANPLAVDLLEKM 284
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 98/205 (47%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L ++++ L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 104 LVTHLMGADLNNIVKX---QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 158
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI D G+A+ + D M G T Y APE ++ M + DIW+
Sbjct: 159 NEDXEL--KILDFGLARHT--------DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 209 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLT 263
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKM 288
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 17/205 (8%)
Query: 12 RVIGQGSFGCVFIAKPK-SNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLEC 70
+ IG+G+F V +A+ + ++ L +E + LN P +++
Sbjct: 21 KTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILN-HPNIVKL 79
Query: 71 FGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHD 130
F E+ E L++EYA+GG + D + + EK+ R R I+ + + H
Sbjct: 80 F--EVI---ETEKTLYLVMEYASGGEVFDYL--VAHGRMKEKEARAKFRQIVSAVQYCHQ 132
Query: 131 SGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETV 190
VH D+K +N+LL G KIAD G + + K D + G+P Y APE
Sbjct: 133 KYIVHRDLKAENLLL----DGDMNIKIADFGFS--NEFTVGNKLD-TFCGSPPYAAPELF 185
Query: 191 VQHMQEAPS-DIWALGCVVLEMLSG 214
+ P D+W+LG ++ ++SG
Sbjct: 186 QGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 37/209 (17%)
Query: 109 LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAK--RS 166
LP V+ IL+GI ++H + +H D+KP NIL++ + KIAD+G A+ S
Sbjct: 125 LPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNS 184
Query: 167 RHCKRQKFDPSMRGTPLYLAPETVV--QHMQEAPSDIWALGCVVLEMLSGRQAWVVKED- 223
DP + T Y APE ++ +H +A DIWA+GC+ E+L+ + +++
Sbjct: 185 PLKPLADLDPVV-VTFWYRAPELLLGARHYTKA-IDIWAIGCIFAELLTSEPIFHCRQED 242
Query: 224 ---------CSIDQLFSIIG-----DEHSLPEIPSRVSKEARDFLRRCFVR--------- 260
+D++F+++G D + ++P S +DF R +
Sbjct: 243 IKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEH-STLMKDFRRNTYTNCSLIKYMEK 301
Query: 261 ---KP---AFRFTAEMLLDDPFVKGVDEE 283
KP AF ++L DP + E+
Sbjct: 302 HKVKPDSKAFHLLQKLLTMDPIKRITSEQ 330
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 5/91 (5%)
Query: 124 GIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPL 183
GI +H++ ++H D+K NILL F AKI+D G+A+ S + + GT
Sbjct: 145 GINFLHENHHIHRDIKSANILL----DEAFTAKISDFGLARASEKFAQTVMXSRIVGTTA 200
Query: 184 YLAPETVVQHMQEAPSDIWALGCVVLEMLSG 214
Y+APE + + SDI++ G V+LE+++G
Sbjct: 201 YMAPEALRGEIT-PKSDIYSFGVVLLEIITG 230
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 106/260 (40%), Gaps = 28/260 (10%)
Query: 13 VIGQGSFGCVFIAKPKSNSSF--LPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLEC 70
V+G+GSFG V +++ K + L EK V PF+ +
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 86
Query: 71 FGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHD 130
TM ++EY GG L I++ E + I G+ +
Sbjct: 87 HSCFQTMDR-----LYFVMEYVNGGDLMYHIQQVGR--FKEPHAVFYAAEIAIGLFFLQS 139
Query: 131 SGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFD----PSMRGTPLYLA 186
G ++ D+K DN++L + KIAD G+ CK +D GTP Y+A
Sbjct: 140 KGIIYRDLKLDNVMLDSEGH----IKIADFGM------CKENIWDGVTTKXFCGTPDYIA 189
Query: 187 PETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRV 246
PE + D WA G ++ EML+G+ + +++ D+LF I EH++ P +
Sbjct: 190 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE---DELFQSIM-EHNVA-YPKSM 244
Query: 247 SKEARDFLRRCFVRKPAFRF 266
SKEA + + P R
Sbjct: 245 SKEAVAICKGLMTKHPGKRL 264
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 92/192 (47%), Gaps = 13/192 (6%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++LEY GG L D I + + L E++ R R I+ + ++H GY H D+KP+N+L
Sbjct: 85 MVLEYCPGGELFDYI--ISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFD 142
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVV-QHMQEAPSDIWALG 205
K + D G+ + + K G+ Y APE + + + +D+W++G
Sbjct: 143 EYHKLKLI----DFGLCAKPKGNKDYHLQTCC-GSLAYAAPELIQGKSYLGSEADVWSMG 197
Query: 206 CVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFR 265
++ ++ G ++ +D ++ L+ I ++P +S + L++ P R
Sbjct: 198 ILLYVLMCG---FLPFDDDNVMALYKKI--MRGKYDVPKWLSPSSILLLQQMLQVDPKKR 252
Query: 266 FTAEMLLDDPFV 277
+ + LL+ P++
Sbjct: 253 ISMKNLLNHPWI 264
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 104 LVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 158
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI D G+A+ + D M G T Y APE ++ M + DIW+
Sbjct: 159 NEDCEL--KILDAGLARHT--------DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 209 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLT 263
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKM 288
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 9/127 (7%)
Query: 98 GDLIEKCNGNGLPEKDVRHFTR---CI--LEGIGHIHDSGYVHCDVKPDNILLVATQSGK 152
G+L G+ LP + R CI G+ ++H +H DVK NILL
Sbjct: 120 GNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILL----DEN 175
Query: 153 FVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEML 212
FV KI D G++K+ + ++GT Y+ PE ++ SD+++ G V+ E+L
Sbjct: 176 FVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL 235
Query: 213 SGRQAWV 219
R A V
Sbjct: 236 CARSAIV 242
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 97/222 (43%), Gaps = 31/222 (13%)
Query: 13 VIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV----- 67
V+GQG+FG V A+ +S + + + E + +LN V
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYA--IKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAA 70
Query: 68 -LE--CFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEG 124
LE F + +T + + + +EY TL DLI N N ++ R F R ILE
Sbjct: 71 WLERRNFVKPMTAVKKKSTLF-IQMEYCENRTLYDLIHSENLNQQRDEYWRLF-RQILEA 128
Query: 125 IGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKR-SRHCKRQKFD-------- 175
+ +IH G +H D+KP NI + +++ KI D G+AK R K D
Sbjct: 129 LSYIHSQGIIHRDLKPMNIFIDESRN----VKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 176 ---PSMRGTPLYLAPETV--VQHMQEAPSDIWALGCVVLEML 212
S GT +Y+A E + H E D+++LG + EM+
Sbjct: 185 DNLTSAIGTAMYVATEVLDGTGHYNEKI-DMYSLGIIFFEMI 225
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 93/221 (42%), Gaps = 20/221 (9%)
Query: 5 GTSWFRGRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGC 64
G + GR IG GSFG +++ +N + L E +++ L G
Sbjct: 6 GNKFRLGRKIGSGSFGEIYLG---TNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGG 62
Query: 65 PFV--LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCIL 122
+ + FG E G+ YN+L+ G +L DL C+ L K V ++
Sbjct: 63 TGIPNVRWFGVE------GD--YNVLVMDLLGPSLEDLFNFCS-RKLSLKTVLMLADQMI 113
Query: 123 EGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDP-----S 177
+ +H ++H D+KPDN L+ + V I D G+AK+ R + P +
Sbjct: 114 NRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVY-IIDFGLAKKYRDTSTHQHIPYRENKN 172
Query: 178 MRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAW 218
+ GT Y + T + Q D+ +LG V++ L G W
Sbjct: 173 LTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPW 213
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 113/270 (41%), Gaps = 33/270 (12%)
Query: 13 VIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXX--XXXLQKEKEVFDNLNGCPFVLEC 70
VIG+G+FG V A+ K + + + E EV L P ++
Sbjct: 22 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 81
Query: 71 FGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKC--------------NGNGLPEKDVRH 116
G E+ Y L +EYA G L D + K + L + + H
Sbjct: 82 LGA----CEHRGYLY-LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 136
Query: 117 FTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDP 176
F + G+ ++ ++H D+ NIL+ +VAKIAD G++ R + +K
Sbjct: 137 FAADVARGMDYLSQKQFIHRDLAARNILV----GENYVAKIADFGLS-RGQEVYVKK--- 188
Query: 177 SMRGTPL-YLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGD 235
+M P+ ++A E++ + SD+W+ G ++ E++S C+ +L+ +
Sbjct: 189 TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--ELYEKLPQ 246
Query: 236 EHSLPEIPSRVSKEARDFLRRCFVRKPAFR 265
+ L E P E D +R+C+ KP R
Sbjct: 247 GYRL-EKPLNCDDEVYDLMRQCWREKPYER 275
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 5/91 (5%)
Query: 124 GIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPL 183
GI +H++ ++H D+K NILL F AKI+D G+A+ S + + GT
Sbjct: 145 GINFLHENHHIHRDIKSANILL----DEAFTAKISDFGLARASEKFAQTVMXXRIVGTTA 200
Query: 184 YLAPETVVQHMQEAPSDIWALGCVVLEMLSG 214
Y+APE + + SDI++ G V+LE+++G
Sbjct: 201 YMAPEALRGEIT-PKSDIYSFGVVLLEIITG 230
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 113/270 (41%), Gaps = 33/270 (12%)
Query: 13 VIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXX--XXXLQKEKEVFDNLNGCPFVLEC 70
VIG+G+FG V A+ K + + + E EV L P ++
Sbjct: 32 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 91
Query: 71 FGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKC--------------NGNGLPEKDVRH 116
G E+ Y L +EYA G L D + K + L + + H
Sbjct: 92 LGA----CEHRGYLY-LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 146
Query: 117 FTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDP 176
F + G+ ++ ++H D+ NIL+ +VAKIAD G++ R + +K
Sbjct: 147 FAADVARGMDYLSQKQFIHRDLAARNILV----GENYVAKIADFGLS-RGQEVYVKK--- 198
Query: 177 SMRGTPL-YLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGD 235
+M P+ ++A E++ + SD+W+ G ++ E++S C+ +L+ +
Sbjct: 199 TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--ELYEKLPQ 256
Query: 236 EHSLPEIPSRVSKEARDFLRRCFVRKPAFR 265
+ L E P E D +R+C+ KP R
Sbjct: 257 GYRL-EKPLNCDDEVYDLMRQCWREKPYER 285
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 88/207 (42%), Gaps = 16/207 (7%)
Query: 13 VIGQGSFGCVFIAKPK--SNSSFLPPLMXXXXXXXXXXXXLQKEKEV-FDNLNGCPFVLE 69
+IG G FG VF AK + + + + L K V + NGC +
Sbjct: 18 LIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFD 77
Query: 70 CFGEEITMGENGEMAYN----LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGI 125
E T +N + + +E+ GTL IEK G L + I +G+
Sbjct: 78 YDPE--TSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGV 135
Query: 126 GHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYL 185
+IH ++ D+KP NI LV T+ KI D G+ ++ ++ +GT Y+
Sbjct: 136 DYIHSKKLINRDLKPSNIFLVDTKQ----VKIGDFGLVTSLKNDGKR---XRSKGTLRYM 188
Query: 186 APETVVQHMQEAPSDIWALGCVVLEML 212
+PE + D++ALG ++ E+L
Sbjct: 189 SPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 76/153 (49%), Gaps = 16/153 (10%)
Query: 86 NLLLEYAAGGTLGDLIEKC--NGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNI 143
N+++EY TL +++ +G +P + + + +G IH G H D+KP N+
Sbjct: 114 NVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNL 172
Query: 144 LLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG--TPLYLAPETVVQHMQEAPS-D 200
L+ S K+ D G AK K +PS+ + Y APE ++ + PS D
Sbjct: 173 LV---NSKDNTLKLCDFGSAK-----KLIPSEPSVAXICSRFYRAPELMLGATEYTPSID 224
Query: 201 IWALGCVVLEMLSGRQAWVVKEDCSIDQLFSII 233
+W++GCV E++ G+ + + SIDQL II
Sbjct: 225 LWSIGCVFGELILGKPLF--SGETSIDQLVRII 255
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 78/144 (54%), Gaps = 9/144 (6%)
Query: 97 LGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAK 156
L L++ C G GL + F +L GI + HD +H D+KP N+L+ + G+ K
Sbjct: 86 LKKLLDVCEG-GLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLI--NREGEL--K 140
Query: 157 IADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGR 215
IAD G+A R+ +K+ + T Y AP+ ++ + + + DIW++GC+ EM++G
Sbjct: 141 IADFGLA-RAFGIPVRKYTHEIV-TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGT 198
Query: 216 QAWV-VKEDCSIDQLFSIIGDEHS 238
+ V E + ++F I+G +S
Sbjct: 199 PLFPGVSEADQLMRIFRILGTPNS 222
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 111/264 (42%), Gaps = 28/264 (10%)
Query: 12 RVIGQGSFGCVFIAKPKSNSSF--LPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLE 69
R IG+GSFG V I + + + + KE ++ L PF++
Sbjct: 21 RAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH-PFLVN 79
Query: 70 C---FGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIG 126
F +E E+ M +LLL GG L +++ E+ V+ F ++ +
Sbjct: 80 LWYSFQDE----EDMFMVVDLLL----GGDLRYHLQQ--NVHFKEETVKLFICELVMALD 129
Query: 127 HIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLA 186
++ + +H D+KPDNILL + G I D +A R+ +M GT Y+A
Sbjct: 130 YLQNQRIIHRDMKPDNILL--DEHGH--VHITDFNIAAM---LPRETQITTMAGTKPYMA 182
Query: 187 PETVVQHMQEAPS---DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIP 243
PE S D W+LG E+L GR+ + ++ S ++ E ++ P
Sbjct: 183 PEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTF--ETTVVTYP 240
Query: 244 SRVSKEARDFLRRCFVRKPAFRFT 267
S S+E L++ P RF+
Sbjct: 241 SAWSQEMVSLLKKLLEPNPDQRFS 264
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 104 LVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 158
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI D G+A+ + D M G T Y APE ++ M + DIW+
Sbjct: 159 NEDCEL--KILDRGLARHT--------DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 209 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLT 263
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKM 288
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 100 LVTHLMGADLNNIV-KCAK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 154
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI D G+A+ + D M G T Y APE ++ M + DIW+
Sbjct: 155 NEDCEL--KILDFGLARHT--------DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 204
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 205 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLA 259
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 260 QMPKMNFANVFIGANPLAVDLLEKM 284
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 5/91 (5%)
Query: 124 GIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPL 183
GI +H++ ++H D+K NILL F AKI+D G+A+ S + + GT
Sbjct: 139 GINFLHENHHIHRDIKSANILL----DEAFTAKISDFGLARASEKFAQXVMXXRIVGTTA 194
Query: 184 YLAPETVVQHMQEAPSDIWALGCVVLEMLSG 214
Y+APE + + SDI++ G V+LE+++G
Sbjct: 195 YMAPEALRGEIT-PKSDIYSFGVVLLEIITG 224
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 119/270 (44%), Gaps = 60/270 (22%)
Query: 53 KEKEVFDNLNGCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEK 112
+E +V N P+++ +G + GE ++ +E+ GG+L ++++ +PE+
Sbjct: 63 RELQVLHECN-SPYIVGFYGAFYSDGE-----ISICMEHMDGGSLDQVLKEAKR--IPEE 114
Query: 113 DVRHFTRCILEGIGHIHDSGYV-HCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKR 171
+ + +L G+ ++ + + H DVKP NIL+ + + K+ D GV+ +
Sbjct: 115 ILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILV----NSRGEIKLCDFGVSGQLIDSMA 170
Query: 172 QKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFS 231
F GT Y+APE + SDIW++G ++E+ GR + ++ +F
Sbjct: 171 NSF----VGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAIFG 226
Query: 232 --II----GDEHSL------------------------------------PEIPSRV-SK 248
++ G+ HS+ P++P+ V +
Sbjct: 227 RPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTP 286
Query: 249 EARDFLRRCFVRKPAFRFTAEMLLDDPFVK 278
+ ++F+ +C ++ PA R +ML + F+K
Sbjct: 287 DFQEFVNKCLIKNPAERADLKMLTNHTFIK 316
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 78/144 (54%), Gaps = 9/144 (6%)
Query: 97 LGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAK 156
L L++ C G GL + F +L GI + HD +H D+KP N+L+ + G+ K
Sbjct: 86 LKKLLDVCEG-GLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLI--NREGEL--K 140
Query: 157 IADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGR 215
IAD G+A R+ +K+ + T Y AP+ ++ + + + DIW++GC+ EM++G
Sbjct: 141 IADFGLA-RAFGIPVRKYTHEVV-TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGT 198
Query: 216 QAWV-VKEDCSIDQLFSIIGDEHS 238
+ V E + ++F I+G +S
Sbjct: 199 PLFPGVSEADQLMRIFRILGTPNS 222
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 112/262 (42%), Gaps = 17/262 (6%)
Query: 13 VIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLECFG 72
IG+GS+G V IA K + ++E E+ +L+ P ++ +
Sbjct: 16 TIGRGSWGEVKIAVQK-GTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDH-PNIIRLYE 73
Query: 73 EEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSG 132
T +N ++ L++E GG L + + + E D + +L + + H
Sbjct: 74 ---TFEDNTDIY--LVMELCTGGELFERV--VHKRVFRESDAARIMKDVLSAVAYCHKLN 126
Query: 133 YVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQ 192
H D+KP+N L + T S K+ D G+A R + K + + GTP Y++P+ V++
Sbjct: 127 VAHRDLKPENFLFL-TDSPDSPLKLIDFGLAARFKPGKMMR---TKVGTPYYVSPQ-VLE 181
Query: 193 HMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIP-SRVSKEAR 251
+ D W+ G ++ +L G + D + + I + PE VS +A
Sbjct: 182 GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEV--MLKIREGTFTFPEKDWLNVSPQAE 239
Query: 252 DFLRRCFVRKPAFRFTAEMLLD 273
+RR + P R T+ L+
Sbjct: 240 SLIRRLLTKSPKQRITSLQALE 261
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 112/262 (42%), Gaps = 17/262 (6%)
Query: 13 VIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLECFG 72
IG+GS+G V IA K + ++E E+ +L+ P ++ +
Sbjct: 33 TIGRGSWGEVKIAVQK-GTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDH-PNIIRLYE 90
Query: 73 EEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSG 132
T +N ++ L++E GG L + + + E D + +L + + H
Sbjct: 91 ---TFEDNTDIY--LVMELCTGGELFERV--VHKRVFRESDAARIMKDVLSAVAYCHKLN 143
Query: 133 YVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQ 192
H D+KP+N L + T S K+ D G+A R + K + + GTP Y++P+ V++
Sbjct: 144 VAHRDLKPENFLFL-TDSPDSPLKLIDFGLAARFKPGKMMR---TKVGTPYYVSPQ-VLE 198
Query: 193 HMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIP-SRVSKEAR 251
+ D W+ G ++ +L G + D + + I + PE VS +A
Sbjct: 199 GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEV--MLKIREGTFTFPEKDWLNVSPQAE 256
Query: 252 DFLRRCFVRKPAFRFTAEMLLD 273
+RR + P R T+ L+
Sbjct: 257 SLIRRLLTKSPKQRITSLQALE 278
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 98/205 (47%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L ++++ L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 104 LVTHLMGADLNNIVKX---QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 158
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI D G+A+ + D M G T Y APE ++ M + DIW+
Sbjct: 159 NEDCEL--KILDFGLARHT--------DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 209 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLT 263
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKM 288
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 78/144 (54%), Gaps = 9/144 (6%)
Query: 97 LGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAK 156
L L++ C G GL + F +L GI + HD +H D+KP N+L+ + G+ K
Sbjct: 86 LKKLLDVCEG-GLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLI--NREGEL--K 140
Query: 157 IADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGR 215
IAD G+A R+ +K+ + T Y AP+ ++ + + + DIW++GC+ EM++G
Sbjct: 141 IADFGLA-RAFGIPVRKYTHEVV-TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGA 198
Query: 216 QAWV-VKEDCSIDQLFSIIGDEHS 238
+ V E + ++F I+G +S
Sbjct: 199 PLFPGVSEADQLMRIFRILGTPNS 222
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 109/261 (41%), Gaps = 29/261 (11%)
Query: 12 RVIGQGSFGCVFIAKPKSNSSF--LPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLE 69
+++G+G+FG V + + K+ + + L E V N PF+
Sbjct: 14 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH-PFLTA 72
Query: 70 CFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIH 129
+ + + + ++EYA GG L E+ R + I+ + ++H
Sbjct: 73 L---KYAFQTHDRLCF--VMEYANGGEL--FFHLSRERVFTEERARFYGAEIVSALEYLH 125
Query: 130 DSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFD-PSMR---GTPLYL 185
V+ D+K +N++L + G KI D G+ CK D +M+ GTP YL
Sbjct: 126 SRDVVYRDIKLENLML--DKDGHI--KITDFGL------CKEGISDGATMKTFCGTPEYL 175
Query: 186 APETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSR 245
APE + + D W LG V+ EM+ GR + ++ ++LF +I E P
Sbjct: 176 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---ERLFELILMEEI--RFPRT 230
Query: 246 VSKEARDFLRRCFVRKPAFRF 266
+S EA+ L + P R
Sbjct: 231 LSPEAKSLLAGLLKKDPKQRL 251
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 74/152 (48%), Gaps = 7/152 (4%)
Query: 114 VRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKR--SRHCKR 171
VR+F +L G+ ++H + +H D+KP N+L+ + KI D G+A+ + +
Sbjct: 161 VRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLV----NENCELKIGDFGMARGLCTSPAEH 216
Query: 172 QKFDPSMRGTPLYLAPETVVQ-HMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLF 230
Q F T Y APE ++ H D+W++GC+ EML+ RQ + K QL
Sbjct: 217 QYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLI 276
Query: 231 SIIGDEHSLPEIPSRVSKEARDFLRRCFVRKP 262
++ S I + ++ R +++ R+P
Sbjct: 277 MMVLGTPSPAVIQAVGAERVRAYIQSLPPRQP 308
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 109/261 (41%), Gaps = 29/261 (11%)
Query: 12 RVIGQGSFGCVFIAKPKSNSSF--LPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLE 69
+++G+G+FG V + + K+ + + L E V N PF+
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH-PFLTA 69
Query: 70 CFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIH 129
+ + + + ++EYA GG L E+ R + I+ + ++H
Sbjct: 70 L---KYAFQTHDRLCF--VMEYANGGEL--FFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 130 DSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFD-PSMR---GTPLYL 185
V+ D+K +N++L + G KI D G+ CK D +M+ GTP YL
Sbjct: 123 SRDVVYRDIKLENLML--DKDGHI--KITDFGL------CKEGISDGATMKTFCGTPEYL 172
Query: 186 APETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSR 245
APE + + D W LG V+ EM+ GR + ++ ++LF +I E P
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---ERLFELILMEEI--RFPRT 227
Query: 246 VSKEARDFLRRCFVRKPAFRF 266
+S EA+ L + P R
Sbjct: 228 LSPEAKSLLAGLLKKDPKQRL 248
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 117/276 (42%), Gaps = 18/276 (6%)
Query: 14 IGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLECFGE 73
IG+G++G V K + + L + +V + CP++++ +G
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYG- 88
Query: 74 EITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDS-G 132
+ G+ + L + + + +PE+ + T ++ + H+ ++
Sbjct: 89 --ALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK 146
Query: 133 YVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETV-- 190
+H D+KP NILL +SG K+ D G++ + + D R Y+APE +
Sbjct: 147 IIHRDIKPSNILL--DRSGNI--KLCDFGISGQLVDSIAKTRDAGCRP---YMAPERIDP 199
Query: 191 --VQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSII-GDEHSLPEIPSR-V 246
+ + SD+W+LG + E+ +GR + K + DQL ++ GD L R
Sbjct: 200 SASRQGYDVRSDVWSLGITLYELATGRFPY-PKWNSVFDQLTQVVKGDPPQLSNSEEREF 258
Query: 247 SKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGVDE 282
S +F+ C + + R + LL PF+ +E
Sbjct: 259 SPSFINFVNLCLTKDESKRPKYKELLKHPFILMYEE 294
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 104 LVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 158
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI D G+A+ + D M G T Y APE ++ M + DIW+
Sbjct: 159 NEDCEL--KILDGGLARHT--------DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 209 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLT 263
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKM 288
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 109/261 (41%), Gaps = 29/261 (11%)
Query: 12 RVIGQGSFGCVFIAKPKSNSSF--LPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLE 69
+++G+G+FG V + + K+ + + L E V N PF+
Sbjct: 16 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH-PFLTA 74
Query: 70 CFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIH 129
+ + + + ++EYA GG L E+ R + I+ + ++H
Sbjct: 75 L---KYAFQTHDRLCF--VMEYANGGEL--FFHLSRERVFTEERARFYGAEIVSALEYLH 127
Query: 130 DSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFD-PSMR---GTPLYL 185
V+ D+K +N++L + G KI D G+ CK D +M+ GTP YL
Sbjct: 128 SRDVVYRDIKLENLML--DKDGHI--KITDFGL------CKEGISDGATMKXFCGTPEYL 177
Query: 186 APETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSR 245
APE + + D W LG V+ EM+ GR + ++ ++LF +I E P
Sbjct: 178 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---ERLFELILMEEI--RFPRT 232
Query: 246 VSKEARDFLRRCFVRKPAFRF 266
+S EA+ L + P R
Sbjct: 233 LSPEAKSLLAGLLKKDPKQRL 253
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 97/205 (47%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L ++++ L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 104 LVTHLMGADLNNIVK---SQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 158
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI D G+ + + D M G T Y APE ++ M + DIW+
Sbjct: 159 NEDSEL--KILDFGLCRHT--------DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 209 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLT 263
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKM 288
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 97/202 (48%), Gaps = 22/202 (10%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 111 LVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 165
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGC 206
+ + KI D G+A RH + T Y APE ++ M + DIW++GC
Sbjct: 166 NEDCEL--KILDFGLA---RHTADEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 218
Query: 207 VVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFVRKP 262
++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ + + P
Sbjct: 219 IMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLTQMP 273
Query: 263 AFRFTAEMLLDDPFVKGVDEEL 284
F + +P + E++
Sbjct: 274 KMNFANVFIGANPLAVDLLEKM 295
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 97/202 (48%), Gaps = 22/202 (10%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 111 LVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 165
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGC 206
+ + KI D G+A RH + T Y APE ++ M + DIW++GC
Sbjct: 166 NEDCEL--KILDFGLA---RHTADEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 218
Query: 207 VVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFVRKP 262
++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ + + P
Sbjct: 219 IMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLTQMP 273
Query: 263 AFRFTAEMLLDDPFVKGVDEEL 284
F + +P + E++
Sbjct: 274 KMNFANVFIGANPLAVDLLEKM 295
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 74/152 (48%), Gaps = 7/152 (4%)
Query: 114 VRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKR--SRHCKR 171
VR+F +L G+ ++H + +H D+KP N+L+ + KI D G+A+ + +
Sbjct: 160 VRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLV----NENCELKIGDFGMARGLCTSPAEH 215
Query: 172 QKFDPSMRGTPLYLAPETVVQ-HMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLF 230
Q F T Y APE ++ H D+W++GC+ EML+ RQ + K QL
Sbjct: 216 QYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLI 275
Query: 231 SIIGDEHSLPEIPSRVSKEARDFLRRCFVRKP 262
++ S I + ++ R +++ R+P
Sbjct: 276 MMVLGTPSPAVIQAVGAERVRAYIQSLPPRQP 307
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 109/261 (41%), Gaps = 29/261 (11%)
Query: 12 RVIGQGSFGCVFIAKPKSNSSF--LPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLE 69
+++G+G+FG V + + K+ + + L E V N PF+
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH-PFLTA 69
Query: 70 CFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIH 129
+ + + + ++EYA GG L E+ R + I+ + ++H
Sbjct: 70 L---KYAFQTHDRLCF--VMEYANGGEL--FFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 130 DSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFD-PSMR---GTPLYL 185
V+ D+K +N++L + G KI D G+ CK D +M+ GTP YL
Sbjct: 123 SRDVVYRDIKLENLML--DKDGHI--KITDFGL------CKEGISDGATMKTFCGTPEYL 172
Query: 186 APETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSR 245
APE + + D W LG V+ EM+ GR + ++ ++LF +I E P
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---ERLFELILMEEI--RFPRT 227
Query: 246 VSKEARDFLRRCFVRKPAFRF 266
+S EA+ L + P R
Sbjct: 228 LSPEAKSLLAGLLKKDPKQRL 248
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 97/202 (48%), Gaps = 22/202 (10%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 111 LVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 165
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGC 206
+ + KI D G+A RH + T Y APE ++ M + DIW++GC
Sbjct: 166 NEDCEL--KILDFGLA---RHTADEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 218
Query: 207 VVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFVRKP 262
++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ + + P
Sbjct: 219 IMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLTQMP 273
Query: 263 AFRFTAEMLLDDPFVKGVDEEL 284
F + +P + E++
Sbjct: 274 KMNFANVFIGANPLAVDLLEKM 295
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 109/261 (41%), Gaps = 29/261 (11%)
Query: 12 RVIGQGSFGCVFIAKPKSNSSF--LPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLE 69
+++G+G+FG V + + K+ + + L E V N PF+
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH-PFLTA 69
Query: 70 CFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIH 129
+ + + + ++EYA GG L E+ R + I+ + ++H
Sbjct: 70 L---KYAFQTHDRLCF--VMEYANGGEL--FFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 130 DSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFD-PSMR---GTPLYL 185
V+ D+K +N++L + G KI D G+ CK D +M+ GTP YL
Sbjct: 123 SRDVVYRDIKLENLML--DKDGHI--KITDFGL------CKEGISDGATMKXFCGTPEYL 172
Query: 186 APETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSR 245
APE + + D W LG V+ EM+ GR + ++ ++LF +I E P
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---ERLFELILMEEI--RFPRT 227
Query: 246 VSKEARDFLRRCFVRKPAFRF 266
+S EA+ L + P R
Sbjct: 228 LSPEAKSLLAGLLKKDPKQRL 248
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 109/261 (41%), Gaps = 29/261 (11%)
Query: 12 RVIGQGSFGCVFIAKPKSNSSF--LPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLE 69
+++G+G+FG V + + K+ + + L E V N PF+
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH-PFLTA 69
Query: 70 CFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIH 129
+ + + + ++EYA GG L E+ R + I+ + ++H
Sbjct: 70 L---KYAFQTHDRLCF--VMEYANGGEL--FFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 130 DSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFD-PSMR---GTPLYL 185
V+ D+K +N++L + G KI D G+ CK D +M+ GTP YL
Sbjct: 123 SRDVVYRDIKLENLML--DKDGHI--KITDFGL------CKEGISDGATMKXFCGTPEYL 172
Query: 186 APETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSR 245
APE + + D W LG V+ EM+ GR + ++ ++LF +I E P
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---ERLFELILMEEI--RFPRT 227
Query: 246 VSKEARDFLRRCFVRKPAFRF 266
+S EA+ L + P R
Sbjct: 228 LSPEAKSLLAGLLKKDPKQRL 248
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 109/261 (41%), Gaps = 29/261 (11%)
Query: 12 RVIGQGSFGCVFIAKPKSNSSF--LPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLE 69
+++G+G+FG V + + K+ + + L E V N PF+
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH-PFLTA 69
Query: 70 CFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIH 129
+ + + + ++EYA GG L E+ R + I+ + ++H
Sbjct: 70 L---KYAFQTHDRLCF--VMEYANGGEL--FFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 130 DSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFD-PSMR---GTPLYL 185
V+ D+K +N++L + G KI D G+ CK D +M+ GTP YL
Sbjct: 123 SRDVVYRDIKLENLML--DKDGHI--KITDFGL------CKEGISDGATMKXFCGTPEYL 172
Query: 186 APETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSR 245
APE + + D W LG V+ EM+ GR + ++ ++LF +I E P
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---ERLFELILMEEI--RFPRT 227
Query: 246 VSKEARDFLRRCFVRKPAFRF 266
+S EA+ L + P R
Sbjct: 228 LSPEAKSLLAGLLKKDPKQRL 248
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 9/137 (6%)
Query: 97 LGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAK 156
L D ++ G+P ++ + +L+G+ H +H D+KP+N LL+ T+ K
Sbjct: 88 LKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPEN-LLINTEGA---IK 143
Query: 157 IADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQ-HMQEAPSDIWALGCVVLEMLSGR 215
+AD G+A+ R + T Y APE ++ DIW+LGC+ EM++ R
Sbjct: 144 LADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 216 QAWVVKEDCSIDQLFSI 232
+ D IDQLF I
Sbjct: 202 A--LFPGDSEIDQLFRI 216
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 122/293 (41%), Gaps = 46/293 (15%)
Query: 12 RVIGQGSFGCVFIAKP-KSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLEC 70
+ IG+G+F V +A+ + ++ L +E + LN P +++
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLN-HPNIVKL 78
Query: 71 FGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHD 130
F E+ E L+ EYA+GG + D + EK+ R R I+ + + H
Sbjct: 79 F--EVI---ETEKTLYLVXEYASGGEVFDYL--VAHGRXKEKEARAKFRQIVSAVQYCHQ 131
Query: 131 SGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETV 190
VH D+K +N+LL A + KIAD G + + K D + G P Y APE
Sbjct: 132 KFIVHRDLKAENLLLDADXN----IKIADFGFS--NEFTFGNKLD-AFCGAPPYAAPELF 184
Query: 191 VQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRV--- 246
+ P D+W+LG ++ ++SG S+ D +L E+ RV
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSG----------------SLPFDGQNLKELRERVLRG 228
Query: 247 --------SKEARDFLRRCFVRKPAFRFTAEMLLDDPF--VKGVDEELSRELE 289
S + + L++ + P+ R T E + D + V D+EL +E
Sbjct: 229 KYRIPFYXSTDCENLLKKFLILNPSKRGTLEQIXKDRWXNVGHEDDELKPYVE 281
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 85/208 (40%), Gaps = 34/208 (16%)
Query: 59 DNLNGCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFT 118
DN N C + + F +G M + L G + D ++ N P VRH
Sbjct: 93 DNKNLCVQMFDWFDY------HGHMCISFEL---LGLSTFDFLKDNNYLPYPIHQVRHMA 143
Query: 119 RCILEGIGHIHDSGYVHCDVKPDNILLVAT--------------QSGKFVA-KIADLGVA 163
+ + + +HD+ H D+KP+NIL V + +S K A ++ D G A
Sbjct: 144 FQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSA 203
Query: 164 KRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKED 223
+ ++ T Y APE +++ P D+W++GC++ E G +
Sbjct: 204 TFD-----HEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTH-- 256
Query: 224 CSIDQLFSIIGDEHSLPEIPSRVSKEAR 251
D + E L IPSR+ ++ R
Sbjct: 257 ---DNREHLAMMERILGPIPSRMIRKTR 281
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 124/287 (43%), Gaps = 37/287 (12%)
Query: 11 GRVIGQGSFGCVFIA--------KPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLN 62
G+ +G+G+FG V +A KPK + + M L E E+ +
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVT-VAVKMLKDDATEKDLSDLVSEMEMMKMIG 98
Query: 63 GCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIE---------KCNGNGLPE-- 111
++ G ++G + +++EYA+ G L + + + N +PE
Sbjct: 99 KHKNIINLLG---ACTQDGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 112 ---KDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
KD+ T + G+ ++ +H D+ N+L+ V KIAD G+A+ +
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN----VMKIADFGLARDINN 209
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSID 227
K + R ++APE + + SD+W+ G ++ E+ + G + ++
Sbjct: 210 IDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY---PGIPVE 266
Query: 228 QLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDD 274
+LF ++ + H + + P+ + E +R C+ P+ R T + L++D
Sbjct: 267 ELFKLLKEGHRM-DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 312
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 124/287 (43%), Gaps = 37/287 (12%)
Query: 11 GRVIGQGSFGCVFIA--------KPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLN 62
G+ +G+G+FG V +A KPK + + M L E E+ +
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVT-VAVKMLKDDATEKDLSDLVSEMEMMKMIG 98
Query: 63 GCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIE---------KCNGNGLPE-- 111
++ G ++G + +++EYA+ G L + + + N +PE
Sbjct: 99 KHKNIINLLG---ACTQDGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 112 ---KDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
KD+ T + G+ ++ +H D+ N+L+ V KIAD G+A+ +
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN----VMKIADFGLARDINN 209
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSID 227
K + R ++APE + + SD+W+ G ++ E+ + G + ++
Sbjct: 210 IDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY---PGIPVE 266
Query: 228 QLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDD 274
+LF ++ + H + + P+ + E +R C+ P+ R T + L++D
Sbjct: 267 ELFKLLKEGHRM-DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 312
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 113/270 (41%), Gaps = 33/270 (12%)
Query: 13 VIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXX--XXXLQKEKEVFDNLNGCPFVLEC 70
VIG+G+FG V A+ K + + + E EV L P ++
Sbjct: 29 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 88
Query: 71 FGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKC--------------NGNGLPEKDVRH 116
G E+ Y L +EYA G L D + K + L + + H
Sbjct: 89 LG----ACEHRGYLY-LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 143
Query: 117 FTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDP 176
F + G+ ++ ++H ++ NIL+ +VAKIAD G++ R + +K
Sbjct: 144 FAADVARGMDYLSQKQFIHRNLAARNILV----GENYVAKIADFGLS-RGQEVYVKK--- 195
Query: 177 SMRGTPL-YLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGD 235
+M P+ ++A E++ + SD+W+ G ++ E++S C+ +L+ +
Sbjct: 196 TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--ELYEKLPQ 253
Query: 236 EHSLPEIPSRVSKEARDFLRRCFVRKPAFR 265
+ L E P E D +R+C+ KP R
Sbjct: 254 GYRL-EKPLNCDDEVYDLMRQCWREKPYER 282
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 124/287 (43%), Gaps = 37/287 (12%)
Query: 11 GRVIGQGSFGCVFIA--------KPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLN 62
G+ +G+G+FG V +A KPK + + M L E E+ +
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVT-VAVKMLKDDATEKDLSDLVSEMEMMKMIG 98
Query: 63 GCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIE---------KCNGNGLPE-- 111
++ G ++G + +++EYA+ G L + + + N +PE
Sbjct: 99 KHKNIINLLG---ACTQDGPLY--VIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQ 153
Query: 112 ---KDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
KD+ T + G+ ++ +H D+ N+L+ V KIAD G+A+ +
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN----VMKIADFGLARDINN 209
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSID 227
K + R ++APE + + SD+W+ G ++ E+ + G + ++
Sbjct: 210 IDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY---PGIPVE 266
Query: 228 QLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDD 274
+LF ++ + H + + P+ + E +R C+ P+ R T + L++D
Sbjct: 267 ELFKLLKEGHRM-DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 312
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 97 LGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAK 156
L D ++ G+P ++ + +L+G+ H +H D+KP N LL+ T+ K
Sbjct: 90 LKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA---IK 145
Query: 157 IADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQ-HMQEAPSDIWALGCVVLEMLSGR 215
+AD G+A+ R + T Y APE ++ DIW+LGC+ EM++ R
Sbjct: 146 LADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
Query: 216 QAWVVKEDCSIDQLFSI 232
+ D IDQLF I
Sbjct: 204 A--LFPGDSEIDQLFRI 218
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 97 LGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAK 156
L D ++ G+P ++ + +L+G+ H +H D+KP N LL+ T+ K
Sbjct: 91 LKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA---IK 146
Query: 157 IADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQ-HMQEAPSDIWALGCVVLEMLSGR 215
+AD G+A+ R + T Y APE ++ DIW+LGC+ EM++ R
Sbjct: 147 LADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
Query: 216 QAWVVKEDCSIDQLFSI 232
+ D IDQLF I
Sbjct: 205 A--LFPGDSEIDQLFRI 219
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 124/287 (43%), Gaps = 37/287 (12%)
Query: 11 GRVIGQGSFGCVFIA--------KPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLN 62
G+ +G+G+FG V +A KPK + + M L E E+ +
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVT-VAVKMLKDDATEEDLSDLVSEMEMMKMIG 98
Query: 63 GCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIE---------KCNGNGLPE-- 111
++ G ++G + +++EYA+ G L + + + N +PE
Sbjct: 99 KHKNIINLLG---ACTQDGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 112 ---KDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
KD+ T + G+ ++ +H D+ N+L+ V KIAD G+A+ +
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN----VMKIADFGLARDINN 209
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSID 227
K + R ++APE + + SD+W+ G ++ E+ + G + ++
Sbjct: 210 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY---PGIPVE 266
Query: 228 QLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDD 274
+LF ++ + H + + P+ + E +R C+ P+ R T + L++D
Sbjct: 267 ELFKLLKEGHRM-DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 312
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 100/222 (45%), Gaps = 31/222 (13%)
Query: 79 ENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDV 138
+ GE + L++EY G+L D + + + GL + + F + I EG+ ++H Y+H ++
Sbjct: 87 DQGEKSLQLVMEYVPLGSLRDYLPR-HSIGLAQ--LLLFAQQICEGMAYLHSQHYIHRNL 143
Query: 139 KPDNILLVATQSGKFVAKIADLGVAK-----RSRHCKRQKFDPSMRGTPLYLAPETVVQH 193
N+LL + KI D G+AK + R+ D + + APE + ++
Sbjct: 144 AARNVLL----DNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV----FWYAPECLKEY 195
Query: 194 MQEAPSDIWALGCVVLEMLSG------------RQAWVVKEDCSIDQLFSIIGDEHSLPE 241
SD+W+ G + E+L+ + + ++ +L ++ LP
Sbjct: 196 KFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPR 255
Query: 242 IPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGVDEE 283
P + E ++ C+ + +FR T E L+ P +K V E+
Sbjct: 256 -PDKCPCEVYHLMKNCWETEASFRPTFENLI--PILKTVHEK 294
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 124/287 (43%), Gaps = 37/287 (12%)
Query: 11 GRVIGQGSFGCVFIA--------KPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLN 62
G+ +G+G+FG V +A KPK + + M L E E+ +
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVT-VAVKMLKDDATEKDLSDLVSEMEMMKMIG 98
Query: 63 GCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIE---------KCNGNGLPE-- 111
++ G ++G + +++EYA+ G L + + + N +PE
Sbjct: 99 KHKNIIHLLG---ACTQDGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 112 ---KDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
KD+ T + G+ ++ +H D+ N+L+ V KIAD G+A+ +
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN----VMKIADFGLARDINN 209
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSID 227
K + R ++APE + + SD+W+ G ++ E+ + G + ++
Sbjct: 210 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY---PGIPVE 266
Query: 228 QLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDD 274
+LF ++ + H + + P+ + E +R C+ P+ R T + L++D
Sbjct: 267 ELFKLLKEGHRM-DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 312
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 103/241 (42%), Gaps = 33/241 (13%)
Query: 51 LQKEKEVFDNLNGCPFVLECFGEEITM-----GENGEMAYNLLLEYAAGGTLGDLIEKCN 105
L+KE E+ NL + E I E+G L++E+ G+L + + K N
Sbjct: 70 LKKEIEILRNL---------YHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPK-N 119
Query: 106 GNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKR 165
N + K + I +G+ ++ YVH D+ N+L+ + KI D G+ K
Sbjct: 120 KNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQ----VKIGDFGLTKA 175
Query: 166 SRHCKRQKFDPSMRGTPLY-LAPETVVQHMQEAPSDIWALGCVVLEML------SGRQAW 218
K R +P++ APE ++Q SD+W+ G + E+L S A
Sbjct: 176 IETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMAL 235
Query: 219 VVKE------DCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLL 272
+K ++ +L + + + LP P E +R+C+ +P+ R + + L+
Sbjct: 236 FLKMIGPTHGQMTVTRLVNTLKEGKRLP-CPPNCPDEVYQLMRKCWEFQPSNRTSFQNLI 294
Query: 273 D 273
+
Sbjct: 295 E 295
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 103/241 (42%), Gaps = 33/241 (13%)
Query: 51 LQKEKEVFDNLNGCPFVLECFGEEITM-----GENGEMAYNLLLEYAAGGTLGDLIEKCN 105
L+KE E+ NL + E I E+G L++E+ G+L + + K N
Sbjct: 58 LKKEIEILRNL---------YHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPK-N 107
Query: 106 GNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKR 165
N + K + I +G+ ++ YVH D+ N+L+ + KI D G+ K
Sbjct: 108 KNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQ----VKIGDFGLTKA 163
Query: 166 SRHCKRQKFDPSMRGTPLY-LAPETVVQHMQEAPSDIWALGCVVLEML------SGRQAW 218
K R +P++ APE ++Q SD+W+ G + E+L S A
Sbjct: 164 IETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMAL 223
Query: 219 VVKE------DCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLL 272
+K ++ +L + + + LP P E +R+C+ +P+ R + + L+
Sbjct: 224 FLKMIGPTHGQMTVTRLVNTLKEGKRLP-CPPNCPDEVYQLMRKCWEFQPSNRTSFQNLI 282
Query: 273 D 273
+
Sbjct: 283 E 283
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 124 GIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPL 183
GI +H++ ++H D+K NILL F AKI+D G+A+ S + + GT
Sbjct: 136 GINFLHENHHIHRDIKSANILL----DEAFTAKISDFGLARASEKFAQXVXXSRIVGTTA 191
Query: 184 YLAPETVVQHMQEAPSDIWALGCVVLEMLSG 214
Y APE + + SDI++ G V+LE+++G
Sbjct: 192 YXAPEALRGEIT-PKSDIYSFGVVLLEIITG 221
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 124/287 (43%), Gaps = 37/287 (12%)
Query: 11 GRVIGQGSFGCVFIA--------KPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLN 62
G+ +G+G+FG V +A KPK + + M L E E+ +
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVT-VAVKMLKDDATEKDLSDLVSEMEMMKMIG 98
Query: 63 GCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIE---------KCNGNGLPE-- 111
++ G ++G + +++EYA+ G L + + + N +PE
Sbjct: 99 KHKNIITLLG---ACTQDGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 112 ---KDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
KD+ T + G+ ++ +H D+ N+L+ V KIAD G+A+ +
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN----VMKIADFGLARDINN 209
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSID 227
K + R ++APE + + SD+W+ G ++ E+ + G + ++
Sbjct: 210 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY---PGIPVE 266
Query: 228 QLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDD 274
+LF ++ + H + + P+ + E +R C+ P+ R T + L++D
Sbjct: 267 ELFKLLKEGHRM-DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 312
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 97/223 (43%), Gaps = 28/223 (12%)
Query: 64 CPFVLECFGEEITMGENGEMAYNL-LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCIL 122
CPF + +G + G++ + L++ + +I+K G +PE + I+
Sbjct: 109 CPFTVTFYG---ALFREGDVWICMELMDTSLDKFYKQVIDK--GQTIPEDILGKIAVSIV 163
Query: 123 EGIGHIHDS-GYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGT 181
+ + H+H +H DVKP N+L+ A K+ D G++ + D G
Sbjct: 164 KALEHLHSKLSVIHRDVKPSNVLINALGQ----VKMCDFGISGYLVDSVAKTID---AGC 216
Query: 182 PLYLAPETVVQHMQE----APSDIWALGCVVLEMLSGR---QAWVVKEDCSIDQLFSIIG 234
Y+APE + + + SDIW+LG ++E+ R +W QL ++
Sbjct: 217 KPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSW----GTPFQQLKQVV- 271
Query: 235 DEHSLPEIPS-RVSKEARDFLRRCFVRKPAFRFTAEMLLDDPF 276
E P++P+ + S E DF +C + R T L+ PF
Sbjct: 272 -EEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPF 313
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 98/205 (47%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 104 LVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 158
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI G+A+ + D M G T Y APE ++ M + DIW+
Sbjct: 159 NEDCEL--KILGFGLARHT--------DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 209 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLT 263
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKM 288
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 98/205 (47%), Gaps = 28/205 (13%)
Query: 88 LLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
L+ + G L +++ KC L + V+ IL G+ +IH + +H D+KP N L
Sbjct: 104 LVTHLMGADLNNIV-KCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAV 158
Query: 148 TQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG---TPLYLAPETVVQHMQEAPS-DIWA 203
+ + KI D +A+ + D M G T Y APE ++ M + DIW+
Sbjct: 159 NEDCEL--KILDFYLARHT--------DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 204 LGCVVLEMLSGRQAWVVKEDCSIDQL---FSIIGDEHSLPEIPSRVSKE-ARDFLRRCFV 259
+GC++ E+L+GR + + IDQL ++G + E+ ++S E AR+++ +
Sbjct: 209 VGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGA--ELLKKISSESARNYI-QSLT 263
Query: 260 RKPAFRFTAEMLLDDPFVKGVDEEL 284
+ P F + +P + E++
Sbjct: 264 QMPKMNFANVFIGANPLAVDLLEKM 288
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 112/271 (41%), Gaps = 50/271 (18%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLEC 70
G+ IG GSFG V+ K + + ++ + P L+
Sbjct: 13 GQRIGSGSFGTVYKGKWHGDVAV----------------------KMLNVTAPTPQQLQA 50
Query: 71 FGEEI-TMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEK-----------DVRHFT 118
F E+ + + + L + Y+ L + + C G+ L +
Sbjct: 51 FKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIA 110
Query: 119 RCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAK-RSRHCKRQKFDPS 177
R +G+ ++H +H D+K +NI L KI D G+A +SR +F+
Sbjct: 111 RQTAQGMDYLHAKSIIHRDLKSNNIFL----HEDLTVKIGDFGLATVKSRWSGSHQFE-Q 165
Query: 178 MRGTPLYLAPETVVQHMQEAP----SDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSII 233
+ G+ L++APE V++ + P SD++A G V+ E+++G+ + + DQ+ ++
Sbjct: 166 LSGSILWMAPE-VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY--SNINNRDQIIFMV 222
Query: 234 GDEH---SLPEIPSRVSKEARDFLRRCFVRK 261
G + L ++ S K + + C +K
Sbjct: 223 GRGYLSPDLSKVRSNCPKAMKRLMAECLKKK 253
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 100/222 (45%), Gaps = 31/222 (13%)
Query: 79 ENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDV 138
+ GE + L++EY G+L D + + + GL + + F + I EG+ ++H Y+H ++
Sbjct: 87 DQGEKSLQLVMEYVPLGSLRDYLPR-HSIGLAQ--LLLFAQQICEGMAYLHAQHYIHRNL 143
Query: 139 KPDNILLVATQSGKFVAKIADLGVAK-----RSRHCKRQKFDPSMRGTPLYLAPETVVQH 193
N+LL + KI D G+AK + R+ D + + APE + ++
Sbjct: 144 AARNVLL----DNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV----FWYAPECLKEY 195
Query: 194 MQEAPSDIWALGCVVLEMLSG------------RQAWVVKEDCSIDQLFSIIGDEHSLPE 241
SD+W+ G + E+L+ + + ++ +L ++ LP
Sbjct: 196 KFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPR 255
Query: 242 IPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGVDEE 283
P + E ++ C+ + +FR T E L+ P +K V E+
Sbjct: 256 -PDKCPCEVYHLMKNCWETEASFRPTFENLI--PILKTVHEK 294
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 99/222 (44%), Gaps = 31/222 (13%)
Query: 79 ENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDV 138
+ G + L++EY G+L D + + + GL + + F + I EG+ ++H Y+H D+
Sbjct: 104 DAGAASLQLVMEYVPLGSLRDYLPR-HSIGLAQ--LLLFAQQICEGMAYLHAQHYIHRDL 160
Query: 139 KPDNILLVATQSGKFVAKIADLGVAK-----RSRHCKRQKFDPSMRGTPLYLAPETVVQH 193
N+LL + KI D G+AK + R+ D + + APE + ++
Sbjct: 161 AARNVLL----DNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPV----FWYAPECLKEY 212
Query: 194 MQEAPSDIWALGCVVLEMLSG------------RQAWVVKEDCSIDQLFSIIGDEHSLPE 241
SD+W+ G + E+L+ + + ++ +L ++ LP
Sbjct: 213 KFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPR 272
Query: 242 IPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGVDEE 283
P + E ++ C+ + +FR T E L+ P +K V E+
Sbjct: 273 -PDKCPAEVYHLMKNCWETEASFRPTFENLI--PILKTVHEK 311
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 113/271 (41%), Gaps = 50/271 (18%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLEC 70
G+ IG GSFG V+ K + + ++ + P L+
Sbjct: 13 GQRIGSGSFGTVYKGKWHGDVAV----------------------KMLNVTAPTPQQLQA 50
Query: 71 FGEEI-TMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEK-----------DVRHFT 118
F E+ + + + L + Y+ L + + C G+ L +
Sbjct: 51 FKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIA 110
Query: 119 RCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVA-KRSRHCKRQKFDPS 177
R +G+ ++H +H D+K +NI L KI D G+A ++SR +F+
Sbjct: 111 RQTAQGMDYLHAKSIIHRDLKSNNIFL----HEDLTVKIGDFGLATEKSRWSGSHQFE-Q 165
Query: 178 MRGTPLYLAPETVVQHMQEAP----SDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSII 233
+ G+ L++APE V++ + P SD++A G V+ E+++G+ + + DQ+ ++
Sbjct: 166 LSGSILWMAPE-VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY--SNINNRDQIIFMV 222
Query: 234 GDEH---SLPEIPSRVSKEARDFLRRCFVRK 261
G + L ++ S K + + C +K
Sbjct: 223 GRGYLSPDLSKVRSNCPKAMKRLMAECLKKK 253
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 98/212 (46%), Gaps = 22/212 (10%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ EY A G+L D ++ G + + F+ I EG+ +I Y+H D++ N+L+
Sbjct: 85 IITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLV- 143
Query: 147 ATQSGKFVAKIADLGVAK---RSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWA 203
S + KIAD G+A+ + + R+ ++ T APE + SD+W+
Sbjct: 144 ---SESLMCKIADFGLARVIEDNEYTAREGAKFPIKWT----APEAINFGCFTIKSDVWS 196
Query: 204 LGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKP 262
G ++ E+++ G+ + + + + + + + +P + + E D ++ C+ K
Sbjct: 197 FGILLYEIVTYGKIPYPGRTNADV---MTALSQGYRMPRVEN-CPDELYDIMKMCWKEKA 252
Query: 263 AFRFTAEMLLDDPFVKGVDEELSRELEGDYSQ 294
R T + +++ V ++ EG Y Q
Sbjct: 253 EERPTFD------YLQSVLDDFYTATEGQYQQ 278
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 113/271 (41%), Gaps = 50/271 (18%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLEC 70
G+ IG GSFG V+ K + + ++ + P L+
Sbjct: 33 GQRIGSGSFGTVYKGKWHGDVAV----------------------KMLNVTAPTPQQLQA 70
Query: 71 FGEEI-TMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEK-----------DVRHFT 118
F E+ + + + L + Y+ L + + C G+ L +
Sbjct: 71 FKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIA 130
Query: 119 RCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVA-KRSRHCKRQKFDPS 177
R +G+ ++H +H D+K +NI L KI D G+A ++SR +F+
Sbjct: 131 RQTAQGMDYLHAKSIIHRDLKSNNIFL----HEDLTVKIGDFGLATEKSRWSGSHQFE-Q 185
Query: 178 MRGTPLYLAPETVVQHMQEAP----SDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSII 233
+ G+ L++APE V++ + P SD++A G V+ E+++G+ + + DQ+ ++
Sbjct: 186 LSGSILWMAPE-VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY--SNINNRDQIIFMV 242
Query: 234 GDEH---SLPEIPSRVSKEARDFLRRCFVRK 261
G + L ++ S K + + C +K
Sbjct: 243 GRGYLSPDLSKVRSNCPKAMKRLMAECLKKK 273
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 123/287 (42%), Gaps = 37/287 (12%)
Query: 11 GRVIGQGSFGCVFIA--------KPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLN 62
G+ +G+G FG V +A KPK + + M L E E+ +
Sbjct: 27 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVT-VAVKMLKDDATEKDLSDLVSEMEMMKMIG 85
Query: 63 GCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIE---------KCNGNGLPE-- 111
++ G ++G + +++EYA+ G L + + + N +PE
Sbjct: 86 KHKNIINLLG---ACTQDGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 140
Query: 112 ---KDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
KD+ T + G+ ++ +H D+ N+L+ V KIAD G+A+ +
Sbjct: 141 MTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENN----VMKIADFGLARDINN 196
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSID 227
K + R ++APE + + SD+W+ G ++ E+ + G + ++
Sbjct: 197 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY---PGIPVE 253
Query: 228 QLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDD 274
+LF ++ + H + + P+ + E +R C+ P+ R T + L++D
Sbjct: 254 ELFKLLKEGHRM-DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 299
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 124/287 (43%), Gaps = 37/287 (12%)
Query: 11 GRVIGQGSFGCVFIA--------KPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLN 62
G+ +G+G+FG V +A KPK + + M L E E+ +
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVT-VAVKMLKDDATEKDLSDLVSEMEMMKMIG 98
Query: 63 GCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIE---------KCNGNGLPE-- 111
++ G ++G + +++EYA+ G L + + + N +PE
Sbjct: 99 KHKNIINLLG---ACTQDGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 112 ---KDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
KD+ T + G+ ++ +H D+ N+L+ V +IAD G+A+ +
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN----VMRIADFGLARDINN 209
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSID 227
K + R ++APE + + SD+W+ G ++ E+ + G + ++
Sbjct: 210 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY---PGIPVE 266
Query: 228 QLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDD 274
+LF ++ + H + + P+ + E +R C+ P+ R T + L++D
Sbjct: 267 ELFKLLKEGHRM-DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 312
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 112/271 (41%), Gaps = 50/271 (18%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLEC 70
G+ IG GSFG V+ K + + ++ + P L+
Sbjct: 18 GQRIGSGSFGTVYKGKWHGDVAV----------------------KMLNVTAPTPQQLQA 55
Query: 71 FGEEI-TMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEK-----------DVRHFT 118
F E+ + + + L + Y+ L + + C G+ L +
Sbjct: 56 FKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIA 115
Query: 119 RCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAK-RSRHCKRQKFDPS 177
R +G+ ++H +H D+K +NI L KI D G+A +SR +F+
Sbjct: 116 RQTAQGMDYLHAKSIIHRDLKSNNIFL----HEDLTVKIGDFGLATVKSRWSGSHQFE-Q 170
Query: 178 MRGTPLYLAPETVVQHMQEAP----SDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSII 233
+ G+ L++APE V++ + P SD++A G V+ E+++G+ + + DQ+ ++
Sbjct: 171 LSGSILWMAPE-VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY--SNINNRDQIIFMV 227
Query: 234 GDEH---SLPEIPSRVSKEARDFLRRCFVRK 261
G + L ++ S K + + C +K
Sbjct: 228 GRGYLSPDLSKVRSNCPKAMKRLMAECLKKK 258
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 123/287 (42%), Gaps = 37/287 (12%)
Query: 11 GRVIGQGSFGCVFIA--------KPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLN 62
G+ +G+G FG V +A KPK + + M L E E+ +
Sbjct: 32 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVT-VAVKMLKDDATEKDLSDLVSEMEMMKMIG 90
Query: 63 GCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIE---------KCNGNGLPE-- 111
++ G ++G + +++EYA+ G L + + + N +PE
Sbjct: 91 KHKNIINLLG---ACTQDGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 145
Query: 112 ---KDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
KD+ T + G+ ++ +H D+ N+L+ V KIAD G+A+ +
Sbjct: 146 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN----VMKIADFGLARDINN 201
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSID 227
K + R ++APE + + SD+W+ G ++ E+ + G + ++
Sbjct: 202 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY---PGIPVE 258
Query: 228 QLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDD 274
+LF ++ + H + + P+ + E +R C+ P+ R T + L++D
Sbjct: 259 ELFKLLKEGHRM-DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 304
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 123/287 (42%), Gaps = 37/287 (12%)
Query: 11 GRVIGQGSFGCVFIA--------KPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLN 62
G+ +G+G FG V +A KPK + + M L E E+ +
Sbjct: 29 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVT-VAVKMLKDDATEKDLSDLVSEMEMMKMIG 87
Query: 63 GCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIE---------KCNGNGLPE-- 111
++ G ++G + +++EYA+ G L + + + N +PE
Sbjct: 88 KHKNIINLLG---ACTQDGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 142
Query: 112 ---KDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
KD+ T + G+ ++ +H D+ N+L+ V KIAD G+A+ +
Sbjct: 143 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN----VMKIADFGLARDINN 198
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSID 227
K + R ++APE + + SD+W+ G ++ E+ + G + ++
Sbjct: 199 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY---PGIPVE 255
Query: 228 QLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDD 274
+LF ++ + H + + P+ + E +R C+ P+ R T + L++D
Sbjct: 256 ELFKLLKEGHRM-DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 301
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 113/271 (41%), Gaps = 50/271 (18%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLEC 70
G+ IG GSFG V+ K + + ++ + P L+
Sbjct: 41 GQRIGSGSFGTVYKGKWHGDVAV----------------------KMLNVTAPTPQQLQA 78
Query: 71 FGEEI-TMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEK-----------DVRHFT 118
F E+ + + + L + Y+ L + + C G+ L +
Sbjct: 79 FKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIA 138
Query: 119 RCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVA-KRSRHCKRQKFDPS 177
R +G+ ++H +H D+K +NI L KI D G+A ++SR +F+
Sbjct: 139 RQTAQGMDYLHAKSIIHRDLKSNNIFL----HEDLTVKIGDFGLATEKSRWSGSHQFE-Q 193
Query: 178 MRGTPLYLAPETVVQHMQEAP----SDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSII 233
+ G+ L++APE V++ + P SD++A G V+ E+++G+ + + DQ+ ++
Sbjct: 194 LSGSILWMAPE-VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY--SNINNRDQIIFMV 250
Query: 234 GDEH---SLPEIPSRVSKEARDFLRRCFVRK 261
G + L ++ S K + + C +K
Sbjct: 251 GRGYLSPDLSKVRSNCPKAMKRLMAECLKKK 281
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 112/271 (41%), Gaps = 50/271 (18%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLEC 70
G+ IG GSFG V+ K + + ++ + P L+
Sbjct: 13 GQRIGSGSFGTVYKGKWHGDVAV----------------------KMLNVTAPTPQQLQA 50
Query: 71 FGEEI-TMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEK-----------DVRHFT 118
F E+ + + + L + Y+ L + + C G+ L +
Sbjct: 51 FKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIA 110
Query: 119 RCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAK-RSRHCKRQKFDPS 177
R +G+ ++H +H D+K +NI L KI D G+A +SR +F+
Sbjct: 111 RQTAQGMDYLHAKSIIHRDLKSNNIFL----HEDLTVKIGDFGLATVKSRWSGSHQFE-Q 165
Query: 178 MRGTPLYLAPETVVQHMQEAP----SDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSII 233
+ G+ L++APE V++ + P SD++A G V+ E+++G+ + + DQ+ ++
Sbjct: 166 LSGSILWMAPE-VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY--SNINNRDQIIFMV 222
Query: 234 GDEH---SLPEIPSRVSKEARDFLRRCFVRK 261
G + L ++ S K + + C +K
Sbjct: 223 GRGYLSPDLSKVRSNCPKAMKRLMAECLKKK 253
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 86/203 (42%), Gaps = 16/203 (7%)
Query: 85 YNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNIL 144
YN ++ G +L DL + C+ K V +L + ++H ++ DVKP+N
Sbjct: 71 YNAMVLELLGPSLEDLFDLCD-RTFTLKTVLMIAIQLLSRMEYVHSKNLIYRDVKPEN-F 128
Query: 145 LVATQSGK--FVAKIADLGVAKRSRHCKRQKFDP-----SMRGTPLYLAPETVVQHMQEA 197
L+ Q K V I D G+AK + +K P S+ GT Y++ T + Q
Sbjct: 129 LIGRQGNKKEHVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSR 188
Query: 198 PSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGD-EHSLP------EIPSRVSKEA 250
D+ ALG + + L G W + ++ + + IGD + + P P ++
Sbjct: 189 RDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRNTPIEALCENFPEEMATYL 248
Query: 251 RDFLRRCFVRKPAFRFTAEMLLD 273
R R F KP + + + D
Sbjct: 249 RYVRRLDFFEKPDYEYLRTLFTD 271
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 112/271 (41%), Gaps = 50/271 (18%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLEC 70
G+ IG GSFG V+ K + + ++ + P L+
Sbjct: 15 GQRIGSGSFGTVYKGKWHGDVAV----------------------KMLNVTAPTPQQLQA 52
Query: 71 FGEEI-TMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEK-----------DVRHFT 118
F E+ + + + L + Y+ L + + C G+ L +
Sbjct: 53 FKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIA 112
Query: 119 RCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAK-RSRHCKRQKFDPS 177
R +G+ ++H +H D+K +NI L KI D G+A +SR +F+
Sbjct: 113 RQTAQGMDYLHAKSIIHRDLKSNNIFL----HEDLTVKIGDFGLATVKSRWSGSHQFE-Q 167
Query: 178 MRGTPLYLAPETVVQHMQEAP----SDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSII 233
+ G+ L++APE V++ + P SD++A G V+ E+++G+ + + DQ+ ++
Sbjct: 168 LSGSILWMAPE-VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY--SNINNRDQIIFMV 224
Query: 234 GDEH---SLPEIPSRVSKEARDFLRRCFVRK 261
G + L ++ S K + + C +K
Sbjct: 225 GRGYLSPDLSKVRSNCPKAMKRLMAECLKKK 255
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 123/287 (42%), Gaps = 37/287 (12%)
Query: 11 GRVIGQGSFGCVFIA--------KPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLN 62
G+ +G+G FG V +A KPK + + M L E E+ +
Sbjct: 86 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVT-VAVKMLKDDATEKDLSDLVSEMEMMKMIG 144
Query: 63 GCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIE---------KCNGNGLPE-- 111
++ G ++G + +++EYA+ G L + + + N +PE
Sbjct: 145 KHKNIINLLG---ACTQDGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 199
Query: 112 ---KDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
KD+ T + G+ ++ +H D+ N+L+ V KIAD G+A+ +
Sbjct: 200 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN----VMKIADFGLARDINN 255
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSID 227
K + R ++APE + + SD+W+ G ++ E+ + G + ++
Sbjct: 256 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY---PGIPVE 312
Query: 228 QLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDD 274
+LF ++ + H + + P+ + E +R C+ P+ R T + L++D
Sbjct: 313 ELFKLLKEGHRM-DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 358
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 112/271 (41%), Gaps = 50/271 (18%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLEC 70
G+ IG GSFG V+ K + + ++ + P L+
Sbjct: 40 GQRIGSGSFGTVYKGKWHGDVAV----------------------KMLNVTAPTPQQLQA 77
Query: 71 FGEEI-TMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEK-----------DVRHFT 118
F E+ + + + L + Y+ L + + C G+ L +
Sbjct: 78 FKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIA 137
Query: 119 RCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAK-RSRHCKRQKFDPS 177
R +G+ ++H +H D+K +NI L KI D G+A +SR +F+
Sbjct: 138 RQTAQGMDYLHAKSIIHRDLKSNNIFL----HEDLTVKIGDFGLATVKSRWSGSHQFE-Q 192
Query: 178 MRGTPLYLAPETVVQHMQEAP----SDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSII 233
+ G+ L++APE V++ + P SD++A G V+ E+++G+ + + DQ+ ++
Sbjct: 193 LSGSILWMAPE-VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY--SNINNRDQIIFMV 249
Query: 234 GDEH---SLPEIPSRVSKEARDFLRRCFVRK 261
G + L ++ S K + + C +K
Sbjct: 250 GRGYLSPDLSKVRSNCPKAMKRLMAECLKKK 280
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 112/271 (41%), Gaps = 50/271 (18%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLEC 70
G+ IG GSFG V+ K + + ++ + P L+
Sbjct: 18 GQRIGSGSFGTVYKGKWHGDVAV----------------------KMLNVTAPTPQQLQA 55
Query: 71 FGEEI-TMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEK-----------DVRHFT 118
F E+ + + + L + Y+ L + + C G+ L +
Sbjct: 56 FKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIA 115
Query: 119 RCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAK-RSRHCKRQKFDPS 177
R +G+ ++H +H D+K +NI L KI D G+A +SR +F+
Sbjct: 116 RQTAQGMDYLHAKSIIHRDLKSNNIFL----HEDLTVKIGDFGLATVKSRWSGSHQFE-Q 170
Query: 178 MRGTPLYLAPETVVQHMQEAP----SDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSII 233
+ G+ L++APE V++ + P SD++A G V+ E+++G+ + + DQ+ ++
Sbjct: 171 LSGSILWMAPE-VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY--SNINNRDQIIFMV 227
Query: 234 GDEH---SLPEIPSRVSKEARDFLRRCFVRK 261
G + L ++ S K + + C +K
Sbjct: 228 GRGYLSPDLSKVRSNCPKAMKRLMAECLKKK 258
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 112/271 (41%), Gaps = 50/271 (18%)
Query: 11 GRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLEC 70
G+ IG GSFG V+ K + + ++ + P L+
Sbjct: 41 GQRIGSGSFGTVYKGKWHGDVAV----------------------KMLNVTAPTPQQLQA 78
Query: 71 FGEEI-TMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEK-----------DVRHFT 118
F E+ + + + L + Y+ L + + C G+ L +
Sbjct: 79 FKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIA 138
Query: 119 RCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAK-RSRHCKRQKFDPS 177
R +G+ ++H +H D+K +NI L KI D G+A +SR +F+
Sbjct: 139 RQTAQGMDYLHAKSIIHRDLKSNNIFL----HEDLTVKIGDFGLATVKSRWSGSHQFE-Q 193
Query: 178 MRGTPLYLAPETVVQHMQEAP----SDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSII 233
+ G+ L++APE V++ + P SD++A G V+ E+++G+ + + DQ+ ++
Sbjct: 194 LSGSILWMAPE-VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY--SNINNRDQIIFMV 250
Query: 234 GDEH---SLPEIPSRVSKEARDFLRRCFVRK 261
G + L ++ S K + + C +K
Sbjct: 251 GRGYLSPDLSKVRSNCPKAMKRLMAECLKKK 281
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 80/172 (46%), Gaps = 8/172 (4%)
Query: 101 IEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADL 160
++K +G L +D+ HF+ + +G+ + +H DV N+LL + VAKI D
Sbjct: 147 LDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL----TNGHVAKIGDF 202
Query: 161 GVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWV 219
G+A+ + + R ++APE++ + SD+W+ G ++ E+ S G +
Sbjct: 203 GLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY- 261
Query: 220 VKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEML 271
+ + ++ D + + + P+ K ++ C+ +P R T + +
Sbjct: 262 -PGILVNSKFYKLVKDGYQMAQ-PAFAPKNIYSIMQACWALEPTHRPTFQQI 311
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 97 LGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAK 156
L ++ G+P ++ + +L+G+ H +H D+KP+N LL+ T+ K
Sbjct: 89 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPEN-LLINTEGA---IK 144
Query: 157 IADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQ-HMQEAPSDIWALGCVVLEMLSGR 215
+AD G+A+ R + T Y APE ++ DIW+LGC+ EM++ R
Sbjct: 145 LADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
Query: 216 QAWVVKEDCSIDQLFSI 232
+ D IDQLF I
Sbjct: 203 A--LFPGDSEIDQLFRI 217
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 97 LGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAK 156
L ++ G+P ++ + +L+G+ H +H D+KP+N LL+ T+ K
Sbjct: 91 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPEN-LLINTEGA---IK 146
Query: 157 IADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQ-HMQEAPSDIWALGCVVLEMLSGR 215
+AD G+A+ R + T Y APE ++ DIW+LGC+ EM++ R
Sbjct: 147 LADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
Query: 216 QAWVVKEDCSIDQLFSI 232
+ D IDQLF I
Sbjct: 205 A--LFPGDSEIDQLFRI 219
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 105/241 (43%), Gaps = 34/241 (14%)
Query: 52 QKEKEVFDNLN------GCPFVLECFGEEITMGENGEMAYNL-LLEYAAGGTLGDLIEKC 104
Q++K + +L+ CPF + +G + G++ + L++ + +I+K
Sbjct: 47 QEQKRLLMDLDISMRTVDCPFTVTFYG---ALFREGDVWICMELMDTSLDKFYKQVIDK- 102
Query: 105 NGNGLPEKDVRHFTRCILEGIGHIHDS-GYVHCDVKPDNILLVATQSGKFVAKIADLGVA 163
G +PE + I++ + H+H +H DVKP N+L+ A K+ D G++
Sbjct: 103 -GQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQ----VKMCDFGIS 157
Query: 164 KRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQE----APSDIWALGCVVLEMLSGR---Q 216
+ D G Y+APE + + + SDIW+LG ++E+ R
Sbjct: 158 GYLVDDVAKDIDA---GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYD 214
Query: 217 AWVVKEDCSIDQLFSIIGDEHSLPEIPS-RVSKEARDFLRRCFVRKPAFRFTAEMLLDDP 275
+W QL ++ E P++P+ + S E DF +C + R T L+ P
Sbjct: 215 SW----GTPFQQLKQVV--EEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHP 268
Query: 276 F 276
F
Sbjct: 269 F 269
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 87/191 (45%), Gaps = 15/191 (7%)
Query: 85 YNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNIL 144
Y LL + DL +K +G L +D+ HF+ + +G+ + +H DV N+L
Sbjct: 126 YGDLLNFLRRKAEADL-DKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVL 184
Query: 145 LVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWAL 204
L + VAKI D G+A+ + + R ++APE++ + SD+W+
Sbjct: 185 L----TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSY 240
Query: 205 GCVVLEMLS-GRQAW---VVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVR 260
G ++ E+ S G + +V + + ++ D + + + P+ K ++ C+
Sbjct: 241 GILLWEIFSLGLNPYPGILVN-----SKFYKLVKDGYQMAQ-PAFAPKNIYSIMQACWAL 294
Query: 261 KPAFRFTAEML 271
+P R T + +
Sbjct: 295 EPTHRPTFQQI 305
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 86/198 (43%), Gaps = 40/198 (20%)
Query: 87 LLLEYAAGGTLGDLIEKCN--GNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNIL 144
LLL + GTL + IE+ GN L E + I G+ IH GY H D+KP NIL
Sbjct: 107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNIL 166
Query: 145 LVATQSGKFVAKIADLGVAKR-------SRHCKRQKFDPSMRGTPLYLAPE--TVVQH-M 194
L G+ V + DLG + SR + + R T Y APE +V H +
Sbjct: 167 L--GDEGQPV--LMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCV 222
Query: 195 QEAPSDIWALGCVVLEMLSGRQ------------AWVVKEDCSIDQ-------LFSIIG- 234
+ +D+W+LGCV+ M+ G A V+ SI Q L+ ++
Sbjct: 223 IDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRHSSALWQLLNS 282
Query: 235 ----DEHSLPEIPSRVSK 248
D H P IP +S+
Sbjct: 283 MMTVDPHQRPHIPLLLSQ 300
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 97 LGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAK 156
L ++ G+P ++ + +L+G+ H +H D+KP+N LL+ T+ K
Sbjct: 89 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPEN-LLINTEGA---IK 144
Query: 157 IADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQ-HMQEAPSDIWALGCVVLEMLSGR 215
+AD G+A+ R + T Y APE ++ DIW+LGC+ EM++ R
Sbjct: 145 LADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
Query: 216 QAWVVKEDCSIDQLFSI 232
+ D IDQLF I
Sbjct: 203 A--LFPGDSEIDQLFRI 217
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 87/191 (45%), Gaps = 15/191 (7%)
Query: 85 YNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNIL 144
Y LL + DL +K +G L +D+ HF+ + +G+ + +H DV N+L
Sbjct: 134 YGDLLNFLRRKAEADL-DKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVL 192
Query: 145 LVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWAL 204
L + VAKI D G+A+ + + R ++APE++ + SD+W+
Sbjct: 193 L----TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSY 248
Query: 205 GCVVLEMLS-GRQAW---VVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVR 260
G ++ E+ S G + +V + + ++ D + + + P+ K ++ C+
Sbjct: 249 GILLWEIFSLGLNPYPGILVN-----SKFYKLVKDGYQMAQ-PAFAPKNIYSIMQACWAL 302
Query: 261 KPAFRFTAEML 271
+P R T + +
Sbjct: 303 EPTHRPTFQQI 313
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 97 LGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAK 156
L ++ G+P ++ + +L+G+ H +H D+KP+N LL+ T+ K
Sbjct: 90 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPEN-LLINTEGA---IK 145
Query: 157 IADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQ-HMQEAPSDIWALGCVVLEMLSGR 215
+AD G+A+ R + T Y APE ++ DIW+LGC+ EM++ R
Sbjct: 146 LADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
Query: 216 QAWVVKEDCSIDQLFSI 232
+ D IDQLF I
Sbjct: 204 A--LFPGDSEIDQLFRI 218
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 114/277 (41%), Gaps = 27/277 (9%)
Query: 12 RVIGQGSFGCVFIAKPKSNSSF--LPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLE 69
+++G+G+FG V + K K+ + + L E V N + PF+
Sbjct: 154 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTA 212
Query: 70 CFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIH 129
+ + + + + ++EYA GG L E R + I+ + ++H
Sbjct: 213 L---KYSFQTHDRLCF--VMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVSALDYLH 265
Query: 130 -DSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
+ V+ D+K +N++L + G KI D G+ K K + GTP YLAPE
Sbjct: 266 SEKNVVYRDLKLENLML--DKDGHI--KITDFGLCKEG--IKDGATMKTFCGTPEYLAPE 319
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSK 248
+ + D W LG V+ EM+ GR + ++ ++LF +I E P +
Sbjct: 320 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---EKLFELILMEEI--RFPRTLGP 374
Query: 249 EARDFLRRCFVRKPAFRF-----TAEMLLDDPFVKGV 280
EA+ L + P R A+ ++ F G+
Sbjct: 375 EAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGI 411
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 114/277 (41%), Gaps = 27/277 (9%)
Query: 12 RVIGQGSFGCVFIAKPKSNSSF--LPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLE 69
+++G+G+FG V + K K+ + + L E V N + PF+
Sbjct: 157 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTA 215
Query: 70 CFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIH 129
+ + + + + ++EYA GG L E R + I+ + ++H
Sbjct: 216 L---KYSFQTHDRLCF--VMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVSALDYLH 268
Query: 130 -DSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPE 188
+ V+ D+K +N++L + G KI D G+ K K + GTP YLAPE
Sbjct: 269 SEKNVVYRDLKLENLML--DKDGHI--KITDFGLCKEG--IKDGATMKTFCGTPEYLAPE 322
Query: 189 TVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSK 248
+ + D W LG V+ EM+ GR + ++ ++LF +I E P +
Sbjct: 323 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---EKLFELILMEEI--RFPRTLGP 377
Query: 249 EARDFLRRCFVRKPAFRF-----TAEMLLDDPFVKGV 280
EA+ L + P R A+ ++ F G+
Sbjct: 378 EAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGI 414
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 26/142 (18%)
Query: 94 GGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILL-------- 145
G +L ++I + N NG +D++ + IL+ + ++ H D+KP+NILL
Sbjct: 119 GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKS 178
Query: 146 ----VATQSGKFVA---------KIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQ 192
GK + K+ D G A + + S+ T Y APE ++
Sbjct: 179 LITVRRVTDGKKIQIYRTKSTGIKLIDFGCA-----TFKSDYHGSIINTRQYRAPEVILN 233
Query: 193 HMQEAPSDIWALGCVVLEMLSG 214
+ SD+W+ GCV+ E+ +G
Sbjct: 234 LGWDVSSDMWSFGCVLAELYTG 255
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 97/223 (43%), Gaps = 27/223 (12%)
Query: 85 YNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNIL 144
+ L+ E GG++ I K E + + + + +H+ G H D+KP+NIL
Sbjct: 86 FYLVFEKMRGGSILSHIHK--RRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENIL 143
Query: 145 LVATQSGKFVAKIADLGVA---KRSRHCKRQKFDPSMR--GTPLYLAPETVVQHMQEAP- 198
V KI D G+ K + C + G+ Y+APE V +EA
Sbjct: 144 CEHPNQVSPV-KICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASI 202
Query: 199 ----SDIWALGCVVLEMLSGRQAWVVK--EDCSIDQ----------LF-SIIGDEHSLPE 241
D+W+LG ++ +LSG +V + DC D+ LF SI ++ P+
Sbjct: 203 YDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPD 262
Query: 242 IP-SRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGVDEE 283
+ +S A+D + + VR R +A +L P+V+G E
Sbjct: 263 KDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPE 305
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 123/287 (42%), Gaps = 37/287 (12%)
Query: 11 GRVIGQGSFGCVFIA--------KPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLN 62
G+ +G+G+FG V +A KPK + + M L E E+ +
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVT-VAVKMLKDDATEKDLSDLVSEMEMMKMIG 98
Query: 63 GCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIE---------KCNGNGLPE-- 111
++ G ++G + +++ YA+ G L + + + N +PE
Sbjct: 99 KHKNIINLLG---ACTQDGPLY--VIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 112 ---KDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
KD+ T + G+ ++ +H D+ N+L+ V KIAD G+A+ +
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN----VMKIADFGLARDINN 209
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSID 227
K + R ++APE + + SD+W+ G ++ E+ + G + ++
Sbjct: 210 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY---PGIPVE 266
Query: 228 QLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDD 274
+LF ++ + H + + P+ + E +R C+ P+ R T + L++D
Sbjct: 267 ELFKLLKEGHRM-DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 312
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 121 ILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG 180
+L GI H+H +G +H D+KP NI++ KI D G+A+ + C P +
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVV----KSDCTLKILDFGLARTA--CTNFMMTPYV-V 187
Query: 181 TPLYLAPETVVQHMQEAPSDIWALGCVVLEMLSG 214
T Y APE ++ A DIW++GC++ E++ G
Sbjct: 188 TRYYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 97 LGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAK 156
L ++ G+P ++ + +L+G+ H +H D+KP N LL+ T+ K
Sbjct: 95 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA---IK 150
Query: 157 IADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVV-QHMQEAPSDIWALGCVVLEMLSGR 215
+AD G+A+ R + T Y APE ++ DIW+LGC+ EM++ R
Sbjct: 151 LADFGLARAFGVPVRTYTHEVV--TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
Query: 216 QAWVVKEDCSIDQLFSI 232
+ D IDQLF I
Sbjct: 209 A--LFPGDSEIDQLFRI 223
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 92/216 (42%), Gaps = 17/216 (7%)
Query: 5 GTSWFRG-RVIGQGSFGCVFIAKPKSNSSFLP--PLMXXXXXXXXXXXXLQKEKEVFDNL 61
G WF RV+G+G FG VF + K+ L EK++ +
Sbjct: 183 GEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV 242
Query: 62 NGCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGN--GLPEKDVRHFTR 119
+ V + E + L++ GG + I + + G E +T
Sbjct: 243 HSRFIVSLAYAFET------KTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA 296
Query: 120 CILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMR 179
I+ G+ H+H ++ D+KP+N+LL G +I+DLG+A + + +
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLL--DDDGN--VRISDLGLAVELKAGQTKT--KGYA 350
Query: 180 GTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLSGR 215
GTP ++APE ++ + D +ALG + EM++ R
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 92/216 (42%), Gaps = 17/216 (7%)
Query: 5 GTSWFRG-RVIGQGSFGCVFIAKPKSNSSFLP--PLMXXXXXXXXXXXXLQKEKEVFDNL 61
G WF RV+G+G FG VF + K+ L EK++ +
Sbjct: 183 GEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV 242
Query: 62 NGCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGN--GLPEKDVRHFTR 119
+ V + E + L++ GG + I + + G E +T
Sbjct: 243 HSRFIVSLAYAFET------KTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA 296
Query: 120 CILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMR 179
I+ G+ H+H ++ D+KP+N+LL G +I+DLG+A + + +
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLL--DDDGN--VRISDLGLAVELKAGQTKT--KGYA 350
Query: 180 GTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLSGR 215
GTP ++APE ++ + D +ALG + EM++ R
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 97 LGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAK 156
L ++ G+P ++ + +L+G+ H +H D+KP N LL+ T+ K
Sbjct: 88 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA---IK 143
Query: 157 IADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVV-QHMQEAPSDIWALGCVVLEMLSGR 215
+AD G+A+ R + T Y APE ++ DIW+LGC+ EM++ R
Sbjct: 144 LADFGLARAFGVPVRTYTHEVV--TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 216 QAWVVKEDCSIDQLFSI 232
+ D IDQLF I
Sbjct: 202 A--LFPGDSEIDQLFRI 216
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 97 LGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAK 156
L ++ G+P ++ + +L+G+ H +H D+KP N LL+ T+ K
Sbjct: 88 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA---IK 143
Query: 157 IADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQ-HMQEAPSDIWALGCVVLEMLSGR 215
+AD G+A+ R + T Y APE ++ DIW+LGC+ EM++ R
Sbjct: 144 LADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 216 QAWVVKEDCSIDQLFSI 232
+ D IDQLF I
Sbjct: 202 A--LFPGDSEIDQLFRI 216
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 92/216 (42%), Gaps = 17/216 (7%)
Query: 5 GTSWFRG-RVIGQGSFGCVFIAKPKSNSSFLP--PLMXXXXXXXXXXXXLQKEKEVFDNL 61
G WF RV+G+G FG VF + K+ L EK++ +
Sbjct: 183 GEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV 242
Query: 62 NGCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGN--GLPEKDVRHFTR 119
+ V + E + L++ GG + I + + G E +T
Sbjct: 243 HSRFIVSLAYAFET------KTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA 296
Query: 120 CILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMR 179
I+ G+ H+H ++ D+KP+N+LL G +I+DLG+A + + +
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLL--DDDGN--VRISDLGLAVELKAGQTKT--KGYA 350
Query: 180 GTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLSGR 215
GTP ++APE ++ + D +ALG + EM++ R
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 92/216 (42%), Gaps = 17/216 (7%)
Query: 5 GTSWFRG-RVIGQGSFGCVFIAKPKSNSSFLP--PLMXXXXXXXXXXXXLQKEKEVFDNL 61
G WF RV+G+G FG VF + K+ L EK++ +
Sbjct: 183 GEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV 242
Query: 62 NGCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGN--GLPEKDVRHFTR 119
+ V + E + L++ GG + I + + G E +T
Sbjct: 243 HSRFIVSLAYAFET------KTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA 296
Query: 120 CILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMR 179
I+ G+ H+H ++ D+KP+N+LL G +I+DLG+A + + +
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLL--DDDGN--VRISDLGLAVELKAGQTKT--KGYA 350
Query: 180 GTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLSGR 215
GTP ++APE ++ + D +ALG + EM++ R
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 97 LGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAK 156
L ++ G+P ++ + +L+G+ H +H D+KP N LL+ T+ K
Sbjct: 87 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA---IK 142
Query: 157 IADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQ-HMQEAPSDIWALGCVVLEMLSGR 215
+AD G+A+ R + T Y APE ++ DIW+LGC+ EM++ R
Sbjct: 143 LADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
Query: 216 QAWVVKEDCSIDQLFSI 232
+ D IDQLF I
Sbjct: 201 A--LFPGDSEIDQLFRI 215
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 97 LGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAK 156
L ++ G+P ++ + +L+G+ H +H D+KP N LL+ T+ K
Sbjct: 89 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA---IK 144
Query: 157 IADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQ-HMQEAPSDIWALGCVVLEMLSGR 215
+AD G+A+ R + T Y APE ++ DIW+LGC+ EM++ R
Sbjct: 145 LADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
Query: 216 QAWVVKEDCSIDQLFSI 232
+ D IDQLF I
Sbjct: 203 A--LFPGDSEIDQLFRI 217
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 137/329 (41%), Gaps = 49/329 (14%)
Query: 12 RVIGQGSFGCVFIAKPKSNSSF--LPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLE 69
+++G+G+FG V + K K+ + + L E V N + PF+
Sbjct: 14 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTA 72
Query: 70 CFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIH 129
+ + + + + ++EYA GG L E R + I+ + ++H
Sbjct: 73 L---KYSFQTHDRLCF--VMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVSALDYLH 125
Query: 130 -DSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMR---GTPLYL 185
+ V+ D+K +N++L + G KI D G+ K K +M+ GTP YL
Sbjct: 126 SEKNVVYRDLKLENLML--DKDGHI--KITDFGLCKEG-----IKDGATMKXFCGTPEYL 176
Query: 186 APETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSL------ 239
APE + + D W LG V+ EM+ GR + ++ ++LF +I E
Sbjct: 177 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---EKLFELILMEEIRFPRTLG 233
Query: 240 PEIPSRV---------------SKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGVDEEL 284
PE S + S++A++ ++ F ++ E L PF V E
Sbjct: 234 PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSET 293
Query: 285 -SRELEGDYSQGEVTLSNADAESCSPECI 312
+R + +++ +T++ D + S EC+
Sbjct: 294 DTRYFDEEFTAQMITITPPDQDD-SMECV 321
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 97 LGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAK 156
L ++ G+P ++ + +L+G+ H +H D+KP N LL+ T+ K
Sbjct: 88 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA---IK 143
Query: 157 IADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQ-HMQEAPSDIWALGCVVLEMLSGR 215
+AD G+A+ R + T Y APE ++ DIW+LGC+ EM++ R
Sbjct: 144 LADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 216 QAWVVKEDCSIDQLFSI 232
+ D IDQLF I
Sbjct: 202 A--LFPGDSEIDQLFRI 216
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 137/329 (41%), Gaps = 49/329 (14%)
Query: 12 RVIGQGSFGCVFIAKPKSNSSF--LPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLE 69
+++G+G+FG V + K K+ + + L E V N + PF+
Sbjct: 15 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTA 73
Query: 70 CFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIH 129
+ + + + + ++EYA GG L E R + I+ + ++H
Sbjct: 74 L---KYSFQTHDRLCF--VMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVSALDYLH 126
Query: 130 -DSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMR---GTPLYL 185
+ V+ D+K +N++L + G KI D G+ K K +M+ GTP YL
Sbjct: 127 SEKNVVYRDLKLENLML--DKDGHI--KITDFGLCKEG-----IKDGATMKXFCGTPEYL 177
Query: 186 APETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSL------ 239
APE + + D W LG V+ EM+ GR + ++ ++LF +I E
Sbjct: 178 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---EKLFELILMEEIRFPRTLG 234
Query: 240 PEIPSRV---------------SKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGVDEEL 284
PE S + S++A++ ++ F ++ E L PF V E
Sbjct: 235 PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSET 294
Query: 285 -SRELEGDYSQGEVTLSNADAESCSPECI 312
+R + +++ +T++ D + S EC+
Sbjct: 295 DTRYFDEEFTAQMITITPPDQDD-SMECV 322
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 97 LGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAK 156
L ++ G+P ++ + +L+G+ H +H D+KP N LL+ T+ K
Sbjct: 90 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA---IK 145
Query: 157 IADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQ-HMQEAPSDIWALGCVVLEMLSGR 215
+AD G+A+ R + T Y APE ++ DIW+LGC+ EM++ R
Sbjct: 146 LADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
Query: 216 QAWVVKEDCSIDQLFSI 232
+ D IDQLF I
Sbjct: 204 A--LFPGDSEIDQLFRI 218
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 97 LGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAK 156
L ++ G+P ++ + +L+G+ H +H D+KP N LL+ T+ K
Sbjct: 91 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA---IK 146
Query: 157 IADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQ-HMQEAPSDIWALGCVVLEMLSGR 215
+AD G+A+ R + T Y APE ++ DIW+LGC+ EM++ R
Sbjct: 147 LADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
Query: 216 QAWVVKEDCSIDQLFSI 232
+ D IDQLF I
Sbjct: 205 A--LFPGDSEIDQLFRI 219
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 97 LGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAK 156
L ++ G+P ++ + +L+G+ H +H D+KP N LL+ T+ K
Sbjct: 88 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA---IK 143
Query: 157 IADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQ-HMQEAPSDIWALGCVVLEMLSGR 215
+AD G+A+ R + T Y APE ++ DIW+LGC+ EM++ R
Sbjct: 144 LADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 216 QAWVVKEDCSIDQLFSI 232
+ D IDQLF I
Sbjct: 202 A--LFPGDSEIDQLFRI 216
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 97 LGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAK 156
L ++ G+P ++ + +L+G+ H +H D+KP N LL+ T+ K
Sbjct: 88 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA---IK 143
Query: 157 IADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQ-HMQEAPSDIWALGCVVLEMLSGR 215
+AD G+A+ R + T Y APE ++ DIW+LGC+ EM++ R
Sbjct: 144 LADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 216 QAWVVKEDCSIDQLFSI 232
+ D IDQLF I
Sbjct: 202 A--LFPGDSEIDQLFRI 216
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 97 LGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAK 156
L ++ G+P ++ + +L+G+ H +H D+KP N LL+ T+ K
Sbjct: 92 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA---IK 147
Query: 157 IADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQ-HMQEAPSDIWALGCVVLEMLSGR 215
+AD G+A+ R + T Y APE ++ DIW+LGC+ EM++ R
Sbjct: 148 LADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
Query: 216 QAWVVKEDCSIDQLFSI 232
+ D IDQLF I
Sbjct: 206 A--LFPGDSEIDQLFRI 220
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 62/127 (48%), Gaps = 9/127 (7%)
Query: 107 NGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRS 166
G+P ++ + +L+G+ H +H D+KP N LL+ T+ K+AD G+A+
Sbjct: 101 TGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA---IKLADFGLARAF 156
Query: 167 RHCKRQKFDPSMRGTPLYLAPETVVQ-HMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCS 225
R + T Y APE ++ DIW+LGC+ EM++ R + D
Sbjct: 157 GVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA--LFPGDSE 212
Query: 226 IDQLFSI 232
IDQLF I
Sbjct: 213 IDQLFRI 219
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 97 LGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAK 156
L ++ G+P ++ + +L+G+ H +H D+KP N LL+ T+ K
Sbjct: 91 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA---IK 146
Query: 157 IADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQ-HMQEAPSDIWALGCVVLEMLSGR 215
+AD G+A+ R + T Y APE ++ DIW+LGC+ EM++ R
Sbjct: 147 LADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
Query: 216 QAWVVKEDCSIDQLFSI 232
+ D IDQLF I
Sbjct: 205 A--LFPGDSEIDQLFRI 219
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 97 LGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAK 156
L ++ G+P ++ + +L+G+ H +H D+KP N LL+ T+ K
Sbjct: 90 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA---IK 145
Query: 157 IADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQ-HMQEAPSDIWALGCVVLEMLSGR 215
+AD G+A+ R + T Y APE ++ DIW+LGC+ EM++ R
Sbjct: 146 LADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
Query: 216 QAWVVKEDCSIDQLFSI 232
+ D IDQLF I
Sbjct: 204 A--LFPGDSEIDQLFRI 218
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 97 LGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAK 156
L ++ G+P ++ + +L+G+ H +H D+KP N LL+ T+ K
Sbjct: 87 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA---IK 142
Query: 157 IADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQ-HMQEAPSDIWALGCVVLEMLSGR 215
+AD G+A+ R + T Y APE ++ DIW+LGC+ EM++ R
Sbjct: 143 LADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
Query: 216 QAWVVKEDCSIDQLFSI 232
+ D IDQLF I
Sbjct: 201 A--LFPGDSEIDQLFRI 215
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 123/287 (42%), Gaps = 37/287 (12%)
Query: 11 GRVIGQGSFGCVFIA--------KPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLN 62
G+ +G+G+FG V +A KPK + + M L E E+ +
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVT-VAVKMLKDDATEKDLSDLVSEMEMMKMIG 98
Query: 63 GCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIE---------KCNGNGLPE-- 111
++ G ++G + +++ YA+ G L + + + N +PE
Sbjct: 99 KHKNIINLLG---ACTQDGPLY--VIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 112 ---KDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
KD+ T + G+ ++ +H D+ N+L+ V KIAD G+A+ +
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN----VMKIADFGLARDINN 209
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSID 227
K + R ++APE + + SD+W+ G ++ E+ + G + ++
Sbjct: 210 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY---PGIPVE 266
Query: 228 QLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDD 274
+LF ++ + H + + P+ + E +R C+ P+ R T + L++D
Sbjct: 267 ELFKLLKEGHRM-DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 312
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 97 LGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAK 156
L ++ G+P ++ + +L+G+ H +H D+KP N LL+ T+ K
Sbjct: 89 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA---IK 144
Query: 157 IADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQ-HMQEAPSDIWALGCVVLEMLSGR 215
+AD G+A+ R + T Y APE ++ DIW+LGC+ EM++ R
Sbjct: 145 LADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
Query: 216 QAWVVKEDCSIDQLFSI 232
+ D IDQLF I
Sbjct: 203 A--LFPGDSEIDQLFRI 217
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 79/168 (47%), Gaps = 14/168 (8%)
Query: 112 KDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKR 171
+ +++F IL G+ +H++G VH D+ P NILL I D +A+
Sbjct: 134 QHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNND----ITICDFNLAREDTADAN 189
Query: 172 QKFDPSMRGTPLYLAPETVVQHMQEAP-SDIWALGCVVLEMLSGRQAWVVKEDCSIDQLF 230
+ + R Y APE V+Q D+W+ GCV+ EM + R+A + + +QL
Sbjct: 190 KTHYVTHRW---YRAPELVMQFKGFTKLVDMWSAGCVMAEMFN-RKA-LFRGSTFYNQLN 244
Query: 231 SIIGDEHSLPEIPSRV---SKEARDFLRRCFVRKPAFRFTAEMLLDDP 275
I+ + P+I V S ARD+LR PA +TA + DP
Sbjct: 245 KIV-EVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADP 291
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 97 LGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAK 156
L ++ G+P ++ + +L+G+ H +H D+KP N LL+ T+ K
Sbjct: 95 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA---IK 150
Query: 157 IADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQ-HMQEAPSDIWALGCVVLEMLSGR 215
+AD G+A+ R + T Y APE ++ DIW+LGC+ EM++ R
Sbjct: 151 LADFGLARAFGVPVRTYTHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
Query: 216 QAWVVKEDCSIDQLFSI 232
+ D IDQLF I
Sbjct: 209 A--LFPGDSEIDQLFRI 223
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 137/329 (41%), Gaps = 49/329 (14%)
Query: 12 RVIGQGSFGCVFIAKPKSNSSF--LPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLE 69
+++G+G+FG V + K K+ + + L E V N + PF+
Sbjct: 16 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTA 74
Query: 70 CFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIH 129
+ + + + + ++EYA GG L E R + I+ + ++H
Sbjct: 75 L---KYSFQTHDRLCF--VMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVSALDYLH 127
Query: 130 -DSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMR---GTPLYL 185
+ V+ D+K +N++L + G KI D G+ K K +M+ GTP YL
Sbjct: 128 SEKNVVYRDLKLENLML--DKDGHI--KITDFGLCKEG-----IKDGATMKXFCGTPEYL 178
Query: 186 APETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSL------ 239
APE + + D W LG V+ EM+ GR + ++ ++LF +I E
Sbjct: 179 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---EKLFELILMEEIRFPRTLG 235
Query: 240 PEIPSRV---------------SKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGVDEEL 284
PE S + S++A++ ++ F ++ E L PF V E
Sbjct: 236 PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSET 295
Query: 285 -SRELEGDYSQGEVTLSNADAESCSPECI 312
+R + +++ +T++ D + S EC+
Sbjct: 296 DTRYFDEEFTAQMITITPPDQDD-SMECV 323
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 97 LGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAK 156
L ++ G+P ++ + +L+G+ H +H D+KP N LL+ T+ K
Sbjct: 89 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA---IK 144
Query: 157 IADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQ-HMQEAPSDIWALGCVVLEMLSGR 215
+AD G+A+ R + T Y APE ++ DIW+LGC+ EM++ R
Sbjct: 145 LADFGLARAFGVPVRTYTHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
Query: 216 QAWVVKEDCSIDQLFSI 232
+ D IDQLF I
Sbjct: 203 A--LFPGDSEIDQLFRI 217
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 97 LGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAK 156
L ++ G+P ++ + +L+G+ H +H D+KP N LL+ T+ K
Sbjct: 88 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA---IK 143
Query: 157 IADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQ-HMQEAPSDIWALGCVVLEMLSGR 215
+AD G+A+ R + T Y APE ++ DIW+LGC+ EM++ R
Sbjct: 144 LADFGLARAFGVPVRTYTHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 216 QAWVVKEDCSIDQLFSI 232
+ D IDQLF I
Sbjct: 202 A--LFPGDSEIDQLFRI 216
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 97 LGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAK 156
L ++ G+P ++ + +L+G+ H +H D+KP N LL+ T+ K
Sbjct: 91 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA---IK 146
Query: 157 IADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQ-HMQEAPSDIWALGCVVLEMLSGR 215
+AD G+A+ R + T Y APE ++ DIW+LGC+ EM++ R
Sbjct: 147 LADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
Query: 216 QAWVVKEDCSIDQLFSI 232
+ D IDQLF I
Sbjct: 205 A--LFPGDSEIDQLFRI 219
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 97 LGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAK 156
L ++ G+P ++ + +L+G+ H +H D+KP N LL+ T+ K
Sbjct: 88 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA---IK 143
Query: 157 IADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQ-HMQEAPSDIWALGCVVLEMLSGR 215
+AD G+A+ R + T Y APE ++ DIW+LGC+ EM++ R
Sbjct: 144 LADFGLARAFGVPVRTYTHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 216 QAWVVKEDCSIDQLFSI 232
+ D IDQLF I
Sbjct: 202 A--LFPGDSEIDQLFRI 216
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 97 LGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAK 156
L ++ G+P ++ + +L+G+ H +H D+KP N LL+ T+ K
Sbjct: 87 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA---IK 142
Query: 157 IADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQ-HMQEAPSDIWALGCVVLEMLSGR 215
+AD G+A+ R + T Y APE ++ DIW+LGC+ EM++ R
Sbjct: 143 LADFGLARAFGVPVRTYTHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
Query: 216 QAWVVKEDCSIDQLFSI 232
+ D IDQLF I
Sbjct: 201 A--LFPGDSEIDQLFRI 215
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 97 LGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAK 156
L ++ G+P ++ + +L+G+ H +H D+KP N LL+ T+ K
Sbjct: 88 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA---IK 143
Query: 157 IADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQ-HMQEAPSDIWALGCVVLEMLSGR 215
+AD G+A+ R + T Y APE ++ DIW+LGC+ EM++ R
Sbjct: 144 LADFGLARAFGVPVRTYTHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 216 QAWVVKEDCSIDQLFSI 232
+ D IDQLF I
Sbjct: 202 A--LFPGDSEIDQLFRI 216
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 97 LGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAK 156
L ++ G+P ++ + +L+G+ H +H D+KP N LL+ T+ K
Sbjct: 87 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA---IK 142
Query: 157 IADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQ-HMQEAPSDIWALGCVVLEMLSGR 215
+AD G+A+ R + T Y APE ++ DIW+LGC+ EM++ R
Sbjct: 143 LADFGLARAFGVPVRTYTHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
Query: 216 QAWVVKEDCSIDQLFSI 232
+ D IDQLF I
Sbjct: 201 A--LFPGDSEIDQLFRI 215
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 97 LGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAK 156
L ++ G+P ++ + +L+G+ H +H D+KP N LL+ T+ K
Sbjct: 87 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA---IK 142
Query: 157 IADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQ-HMQEAPSDIWALGCVVLEMLSGR 215
+AD G+A+ R + T Y APE ++ DIW+LGC+ EM++ R
Sbjct: 143 LADFGLARAFGVPVRTYTHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
Query: 216 QAWVVKEDCSIDQLFSI 232
+ D IDQLF I
Sbjct: 201 A--LFPGDSEIDQLFRI 215
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 79/168 (47%), Gaps = 14/168 (8%)
Query: 112 KDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKR 171
+ +++F IL G+ +H++G VH D+ P NILL I D +A+
Sbjct: 134 QHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNND----ITICDFNLAREDTADAN 189
Query: 172 QKFDPSMRGTPLYLAPETVVQHMQEAP-SDIWALGCVVLEMLSGRQAWVVKEDCSIDQLF 230
+ + R Y APE V+Q D+W+ GCV+ EM + R+A + + +QL
Sbjct: 190 KTHYVTHRW---YRAPELVMQFKGFTKLVDMWSAGCVMAEMFN-RKA-LFRGSTFYNQLN 244
Query: 231 SIIGDEHSLPEIPSRV---SKEARDFLRRCFVRKPAFRFTAEMLLDDP 275
I+ + P+I V S ARD+LR PA +TA + DP
Sbjct: 245 KIV-EVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADP 291
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 97 LGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAK 156
L ++ G+P ++ + +L+G+ H +H D+KP N LL+ T+ K
Sbjct: 92 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA---IK 147
Query: 157 IADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQ-HMQEAPSDIWALGCVVLEMLSGR 215
+AD G+A+ R + T Y APE ++ DIW+LGC+ EM++ R
Sbjct: 148 LADFGLARAFGVPVRTYTHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
Query: 216 QAWVVKEDCSIDQLFSI 232
+ D IDQLF I
Sbjct: 206 A--LFPGDSEIDQLFRI 220
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 97 LGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAK 156
L ++ G+P ++ + +L+G+ H +H D+KP N LL+ T+ K
Sbjct: 88 LKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHRVLHRDLKPQN-LLINTEGA---IK 143
Query: 157 IADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQ-HMQEAPSDIWALGCVVLEMLSGR 215
+AD G+A+ R + T Y APE ++ DIW+LGC+ EM++ R
Sbjct: 144 LADFGLARAFGVPVRTYTHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 216 QAWVVKEDCSIDQLFSI 232
+ D IDQLF I
Sbjct: 202 A--LFPGDSEIDQLFRI 216
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 97/212 (45%), Gaps = 22/212 (10%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ E+ A G+L D ++ G + + F+ I EG+ +I Y+H D++ N+L+
Sbjct: 84 IITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLV- 142
Query: 147 ATQSGKFVAKIADLGVAK---RSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWA 203
S + KIAD G+A+ + + R+ ++ T APE + S++W+
Sbjct: 143 ---SESLMCKIADFGLARVIEDNEYTAREGAKFPIKWT----APEAINFGCFTIKSNVWS 195
Query: 204 LGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKP 262
G ++ E+++ G+ + + + + S + + +P + E D ++ C+ K
Sbjct: 196 FGILLYEIVTYGKIPYPGRTNADV---MSALSQGYRMPRM-ENCPDELYDIMKMCWKEKA 251
Query: 263 AFRFTAEMLLDDPFVKGVDEELSRELEGDYSQ 294
R T + +++ V ++ EG Y Q
Sbjct: 252 EERPTFD------YLQSVLDDFYTATEGQYQQ 277
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 97 LGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAK 156
L ++ G+P ++ + +L+G+ H +H D+KP N LL+ T+ K
Sbjct: 87 LKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA---IK 142
Query: 157 IADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQ-HMQEAPSDIWALGCVVLEMLSGR 215
+AD G+A+ R + T Y APE ++ DIW+LGC+ EM++ R
Sbjct: 143 LADFGLARAFGVPVRTYTHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
Query: 216 QAWVVKEDCSIDQLFSI 232
+ D IDQLF I
Sbjct: 201 A--LFPGDSEIDQLFRI 215
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 114/284 (40%), Gaps = 23/284 (8%)
Query: 3 SDGTSWFRGRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLN 62
S G ++ G+ IG G+FG + + K + ++ L E + L+
Sbjct: 1 SMGPNFRVGKKIGCGNFGELRLGKNLYTNEYV---AIKLEPIKSRAPQLHLEYRFYKQLS 57
Query: 63 GCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCIL 122
V + + G G+ YN ++ G +L DL + C+ K V ++
Sbjct: 58 ATEGVPQVY----YFGPXGK--YNAMVLELLGPSLEDLFDLCD-RTFTLKTVLMIAIQLI 110
Query: 123 EGIGHIHDSGYVHCDVKPDNILLVATQSGKFVA-KIADLGVAKRSRHCKRQKFDP----- 176
+ ++H ++ DVKP+N L+ + + A I D G+AK + +K P
Sbjct: 111 TRMEYVHTKSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKEYIDPETKKHIPYREHK 170
Query: 177 SMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDE 236
S+ GT Y++ T + Q D+ ALG + + L G W + ++ + + IGD
Sbjct: 171 SLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDT 230
Query: 237 HSLPEI-------PSRVSKEARDFLRRCFVRKPAFRFTAEMLLD 273
I P ++ R R F KP + + ++ D
Sbjct: 231 KRATPIEVLCENFPEEMATYLRYVRRLDFFEKPDYDYLRKLFTD 274
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 17/99 (17%)
Query: 121 ILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG 180
+L GI H+H +G +H D+KP NI++ + + KI D G+A+ + S
Sbjct: 135 MLVGIKHLHSAGIIHRDLKPSNIVVKSDAT----LKILDFGLARTA--------GTSFMM 182
Query: 181 TP-----LYLAPETVVQHMQEAPSDIWALGCVVLEMLSG 214
TP Y APE ++ + DIW++GC++ EM+ G
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 102/235 (43%), Gaps = 38/235 (16%)
Query: 80 NGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVK 139
+ E + L+ EY L ++ C GN + +V+ F +L G+ + H +H D+K
Sbjct: 70 HTEKSLTLVFEYL-DKDLKQYLDDC-GNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLK 127
Query: 140 PDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS 199
P N+L+ + G+ K+AD G+A R++ + +D + T Y P+ ++ +
Sbjct: 128 PQNLLI--NERGEL--KLADFGLA-RAKSIPTKTYDNEV-VTLWYRPPDILLGSTDYSTQ 181
Query: 200 -DIWALGCVVLEMLSGRQAW---VVKEDCSIDQLFSIIG--DEHSLPEIPS--------- 244
D+W +GC+ EM +GR + V+E +F I+G E + P I S
Sbjct: 182 IDMWGVGCIFYEMATGRPLFPGSTVEEQLHF--IFRILGTPTEETWPGILSNEEFKTYNY 239
Query: 245 -------------RVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGVDEELSR 286
R+ + D L + + R +AE + PF + E + +
Sbjct: 240 PKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGERIHK 294
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 68/135 (50%), Gaps = 9/135 (6%)
Query: 99 DLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIA 158
++I K N L ++ + L+G+ ++H +H D+KP+N+LL ++G V K+A
Sbjct: 99 EVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLL--DENG--VLKLA 154
Query: 159 DLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVV-QHMQEAPSDIWALGCVVLEMLSGRQA 217
D G+AK R + T Y APE + M D+WA+GC++ E+L +
Sbjct: 155 DFGLAKSFGSPNRAYXHQVV--TRWYRAPELLFGARMYGVGVDMWAVGCILAELL--LRV 210
Query: 218 WVVKEDCSIDQLFSI 232
+ D +DQL I
Sbjct: 211 PFLPGDSDLDQLTRI 225
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 82/183 (44%), Gaps = 13/183 (7%)
Query: 111 EKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCK 170
EK + + R I + ++H+ G H D+KP+N L +S F K+ D G++K
Sbjct: 167 EKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKS--FEIKLVDFGLSKEFYKLN 224
Query: 171 RQKFD--PSMRGTPLYLAPETVVQHMQEA---PSDIWALGCVVLEMLSGRQAWVVKEDCS 225
++ + GTP ++APE V+ E+ D W+ G ++ +L G + D
Sbjct: 225 NGEYYGMTTKAGTPYFVAPE-VLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDA- 282
Query: 226 IDQLFSIIGDEHSLPEIPSR--VSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGVDEE 283
D + ++ + E P+ +S ARD L R RF A L P++ ++
Sbjct: 283 -DTISQVLNKKLCF-ENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFSDK 340
Query: 284 LSR 286
+ +
Sbjct: 341 IYK 343
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 77/167 (46%), Gaps = 14/167 (8%)
Query: 109 LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
L +D+ HF+ + +G+ + +H DV N+LL + VAKI D G+A+ +
Sbjct: 161 LSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL----TNGHVAKIGDFGLARDIMN 216
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAW---VVKEDC 224
+ R ++APE++ + SD+W+ G ++ E+ S G + +V
Sbjct: 217 DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN--- 273
Query: 225 SIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEML 271
+ + ++ D + + + P+ K ++ C+ +P R T + +
Sbjct: 274 --SKFYKLVKDGYQMAQ-PAFAPKNIYSIMQACWALEPTHRPTFQQI 317
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 93/232 (40%), Gaps = 35/232 (15%)
Query: 52 QKEKEVFDNLNGCPFVLECFGEEITMGEN---GEMAYNLLLEYAAGGTLGDLIEKCNGNG 108
++E E+ + CP ++ + + EN G +++E GG L I+
Sbjct: 58 RREVELHWRASQCPHIVRI----VDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA 113
Query: 109 LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
E++ + I E I ++H H DVKP+N LL ++ + K+ D G AK +
Sbjct: 114 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETTG 172
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSID- 227
+K+D S D+W+LG ++ +L G + +I
Sbjct: 173 ---EKYDKS---------------------CDMWSLGVIMYILLCGYPPFYSNHGLAISP 208
Query: 228 -QLFSIIGDEHSLPEIP-SRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
I ++ P S VS+E + +R +P R T ++ P++
Sbjct: 209 GMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 260
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 84/183 (45%), Gaps = 16/183 (8%)
Query: 109 LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
L +D+ HF+ + +G+ + +H DV N+LL + VAKI D G+A+ +
Sbjct: 163 LSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL----TNGHVAKIGDFGLARDIMN 218
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAW---VVKEDC 224
+ R ++APE++ + SD+W+ G ++ E+ S G + +V
Sbjct: 219 DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN--- 275
Query: 225 SIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGVDEEL 284
+ + ++ D + + + P+ K ++ C+ +P R T + + F++ +E
Sbjct: 276 --SKFYKLVKDGYQMAQ-PAFAPKNIYSIMQACWALEPTHRPTFQQICS--FLQEQAQED 330
Query: 285 SRE 287
RE
Sbjct: 331 RRE 333
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 92/212 (43%), Gaps = 24/212 (11%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ EY G+L D ++ +G L + I EG+ I + Y+H D++ NIL+
Sbjct: 94 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS 153
Query: 147 ATQSGKFVAKIADLGVAK---RSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWA 203
T S KIAD G+A+ + + R+ ++ T APE + SD+W+
Sbjct: 154 DTLS----CKIADFGLARLIEDNEYTAREGAKFPIKWT----APEAINYGTFTIKSDVWS 205
Query: 204 LGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEHSLPEI-PSRVSKEARDFLRRCFVRK 261
G ++ E+++ GR + + + Q E + P +E +R C+ +
Sbjct: 206 FGILLTEIVTHGRIPYPGMTNPEVIQNL-----ERGYRMVRPDNCPEELYQLMRLCWKER 260
Query: 262 PAFRFTAEMLLDDPFVKGVDEELSRELEGDYS 293
P R T + +++ V E+ EG Y
Sbjct: 261 PEDRPTFD------YLRSVLEDFFTATEGQYQ 286
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 81/190 (42%), Gaps = 10/190 (5%)
Query: 86 NLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILL 145
++ E A G+L D + K G+ L R+ + + EG+G++ ++H D+ N+LL
Sbjct: 90 KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ-VAEGMGYLESKRFIHRDLAARNLLL 148
Query: 146 VATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPL-YLAPETVVQHMQEAPSDIWAL 204
+ + KI D G+ + R P + APE++ SD W
Sbjct: 149 AT----RDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMF 204
Query: 205 GCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPA 263
G + EM + G++ W+ I L I + LP P ++ + + +C+ KP
Sbjct: 205 GVTLWEMFTYGQEPWIGLNGSQI--LHKIDKEGERLPR-PEDCPQDIYNVMVQCWAHKPE 261
Query: 264 FRFTAEMLLD 273
R T L D
Sbjct: 262 DRPTFVALRD 271
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 10/190 (5%)
Query: 86 NLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILL 145
++ E A G+L D + K G+ L R+ + + EG+G++ ++H D+ N+LL
Sbjct: 96 KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ-VAEGMGYLESKRFIHRDLAARNLLL 154
Query: 146 VATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPL-YLAPETVVQHMQEAPSDIWAL 204
AT+ + KI D G+ + R P + APE++ SD W
Sbjct: 155 -ATRD---LVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMF 210
Query: 205 GCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPA 263
G + EM + G++ W+ I L I + LP P ++ + + +C+ KP
Sbjct: 211 GVTLWEMFTYGQEPWIGLNGSQI--LHKIDKEGERLPR-PEDCPQDIYNVMVQCWAHKPE 267
Query: 264 FRFTAEMLLD 273
R T L D
Sbjct: 268 DRPTFVALRD 277
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 17/96 (17%)
Query: 124 GIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTP- 182
GI H+H +G +H D+KP NI++ + + KI D G+A+ + S TP
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDAT----LKILDFGLARTA--------GTSFMMTPY 185
Query: 183 ----LYLAPETVVQHMQEAPSDIWALGCVVLEMLSG 214
Y APE ++ + DIW++GC++ EM+ G
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 17/99 (17%)
Query: 121 ILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG 180
+L GI H+H +G +H D+KP NI++ + + KI D G+A+ + S
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDAT----LKILDFGLARTA--------GTSFMM 182
Query: 181 TP-----LYLAPETVVQHMQEAPSDIWALGCVVLEMLSG 214
TP Y APE ++ + DIW++GC++ EM+ G
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 97/225 (43%), Gaps = 41/225 (18%)
Query: 82 EMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPD 141
E N L +Y T+G+ GL V++F +L+G+ H++ +H D+KP
Sbjct: 83 EFMDNDLKKYMDSRTVGN-----TPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQ 137
Query: 142 NILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-D 200
N+L+ + G+ K+ D G+A R+ F + T Y AP+ ++ + S D
Sbjct: 138 NLLI--NKRGQL--KLGDFGLA-RAFGIPVNTFSSEVV-TLWYRAPDVLMGSRTYSTSID 191
Query: 201 IWALGCVVLEMLSGRQAWV-VKEDCSIDQLFSIIGD-EHSL-----------PEIPSRVS 247
IW+ GC++ EM++G+ + ++ + +F I+G SL P I R
Sbjct: 192 IWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPP 251
Query: 248 KEAR----------------DFLRRCFVRKPAFRFTAEMLLDDPF 276
++ R DFL P R +A+ L P+
Sbjct: 252 RDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPW 296
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 73/184 (39%), Gaps = 30/184 (16%)
Query: 83 MAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDN 142
+A+ LL G + +++ N P VRH + + +H++ H D+KP+N
Sbjct: 99 IAFELL-----GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPEN 153
Query: 143 ILLVATQSGKFV---------------AKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
IL V ++ ++AD G A + ++ T Y P
Sbjct: 154 ILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFD-----HEHHTTIVATRHYRPP 208
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E +++ P D+W++GC++ E G + E+ ++ E L IPS +
Sbjct: 209 EVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE-----HLVMMEKILGPIPSHMI 263
Query: 248 KEAR 251
R
Sbjct: 264 HRTR 267
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 98/241 (40%), Gaps = 43/241 (17%)
Query: 12 RVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGC--PFVLE 69
R+ GQG+FG V + K KS + +E ++ +L P +++
Sbjct: 29 RMAGQGTFGTVQLGKEKSTG-----MSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQ 83
Query: 70 CFGEEITMGENG--EMAYNLLLEYAAGGTLGDLIEKCNGN------GLPEKDVRHFTRCI 121
T+GE ++ N+++EY D + +C N P ++ F +
Sbjct: 84 LQSYFYTLGERDRRDIYLNVVMEYVP-----DTLHRCCRNYYRRQVAPPPILIKVFLFQL 138
Query: 122 LEGIG--HIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMR 179
+ IG H+ H D+KP N+L V G K+ D G AK K PS
Sbjct: 139 IRSIGCLHLPSVNVCHRDIKPHNVL-VNEADGTL--KLCDFGSAK--------KLSPSEP 187
Query: 180 GTPL-----YLAPETVV--QHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSI 232
Y APE + QH A DIW++GC+ EM+ G + + D S QL I
Sbjct: 188 NVAYICSRYYRAPELIFGNQHYTTA-VDIWSVGCIFAEMMLGEP--IFRGDNSAGQLHEI 244
Query: 233 I 233
+
Sbjct: 245 V 245
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 73/184 (39%), Gaps = 30/184 (16%)
Query: 83 MAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDN 142
+A+ LL G + +++ N P VRH + + +H++ H D+KP+N
Sbjct: 108 IAFELL-----GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPEN 162
Query: 143 ILLVATQSGKFV---------------AKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
IL V ++ ++AD G A + ++ T Y P
Sbjct: 163 ILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFD-----HEHHTTIVATRHYRPP 217
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E +++ P D+W++GC++ E G + E+ ++ E L IPS +
Sbjct: 218 EVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE-----HLVMMEKILGPIPSHMI 272
Query: 248 KEAR 251
R
Sbjct: 273 HRTR 276
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 10/190 (5%)
Query: 86 NLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILL 145
++ E A G+L D + K G+ L R+ + + EG+G++ ++H D+ N+LL
Sbjct: 96 KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ-VAEGMGYLESKRFIHRDLAARNLLL 154
Query: 146 VATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPL-YLAPETVVQHMQEAPSDIWAL 204
AT+ + KI D G+ + R P + APE++ SD W
Sbjct: 155 -ATRD---LVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMF 210
Query: 205 GCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPA 263
G + EM + G++ W+ I L I + LP P ++ + + +C+ KP
Sbjct: 211 GVTLWEMFTYGQEPWIGLNGSQI--LHKIDKEGERLPR-PEDCPQDIYNVMVQCWAHKPE 267
Query: 264 FRFTAEMLLD 273
R T L D
Sbjct: 268 DRPTFVALRD 277
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 10/190 (5%)
Query: 86 NLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILL 145
++ E A G+L D + K G+ L R+ + + EG+G++ ++H D+ N+LL
Sbjct: 86 KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ-VAEGMGYLESKRFIHRDLAARNLLL 144
Query: 146 VATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPL-YLAPETVVQHMQEAPSDIWAL 204
AT+ + KI D G+ + R P + APE++ SD W
Sbjct: 145 -ATRD---LVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMF 200
Query: 205 GCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPA 263
G + EM + G++ W+ I L I + LP P ++ + + +C+ KP
Sbjct: 201 GVTLWEMFTYGQEPWIGLNGSQI--LHKIDKEGERLPR-PEDCPQDIYNVMVQCWAHKPE 257
Query: 264 FRFTAEMLLD 273
R T L D
Sbjct: 258 DRPTFVALRD 267
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 73/184 (39%), Gaps = 30/184 (16%)
Query: 83 MAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDN 142
+A+ LL G + +++ N P VRH + + +H++ H D+KP+N
Sbjct: 131 IAFELL-----GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPEN 185
Query: 143 ILLVATQSGKFV---------------AKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
IL V ++ ++AD G A + ++ T Y P
Sbjct: 186 ILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFD-----HEHHTTIVATRHYRPP 240
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVS 247
E +++ P D+W++GC++ E G + E+ ++ E L IPS +
Sbjct: 241 EVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE-----HLVMMEKILGPIPSHMI 295
Query: 248 KEAR 251
R
Sbjct: 296 HRTR 299
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 96/223 (43%), Gaps = 27/223 (12%)
Query: 85 YNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNIL 144
+ L+ E GG++ I K E + + + + +H+ G H D+KP+NIL
Sbjct: 86 FYLVFEKMRGGSILSHIHK--RRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENIL 143
Query: 145 LVATQSGKFVAKIADLGVA---KRSRHCKRQKFDPSMR--GTPLYLAPETVVQHMQEAP- 198
V KI D + K + C + G+ Y+APE V +EA
Sbjct: 144 CEHPNQVSPV-KICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASI 202
Query: 199 ----SDIWALGCVVLEMLSGRQAWVVK--EDCSIDQ----------LF-SIIGDEHSLPE 241
D+W+LG ++ +LSG +V + DC D+ LF SI ++ P+
Sbjct: 203 YDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPD 262
Query: 242 IP-SRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGVDEE 283
+ +S A+D + + VR R +A +L P+V+G E
Sbjct: 263 KDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPE 305
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 10/190 (5%)
Query: 86 NLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILL 145
++ E A G+L D + K G+ L R+ + + EG+G++ ++H D+ N+LL
Sbjct: 90 KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ-VAEGMGYLESKRFIHRDLAARNLLL 148
Query: 146 VATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPL-YLAPETVVQHMQEAPSDIWAL 204
AT+ + KI D G+ + R P + APE++ SD W
Sbjct: 149 -ATRD---LVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMF 204
Query: 205 GCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPA 263
G + EM + G++ W+ I L I + LP P ++ + + +C+ KP
Sbjct: 205 GVTLWEMFTYGQEPWIGLNGSQI--LHKIDKEGERLPR-PEDCPQDIYNVMVQCWAHKPE 261
Query: 264 FRFTAEMLLD 273
R T L D
Sbjct: 262 DRPTFVALRD 271
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 10/190 (5%)
Query: 86 NLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILL 145
++ E A G+L D + K G+ L R+ + + EG+G++ ++H D+ N+LL
Sbjct: 86 KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ-VAEGMGYLESKRFIHRDLAARNLLL 144
Query: 146 VATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPL-YLAPETVVQHMQEAPSDIWAL 204
AT+ + KI D G+ + R P + APE++ SD W
Sbjct: 145 -ATRD---LVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMF 200
Query: 205 GCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPA 263
G + EM + G++ W+ I L I + LP P ++ + + +C+ KP
Sbjct: 201 GVTLWEMFTYGQEPWIGLNGSQI--LHKIDKEGERLPR-PEDCPQDIYNVMVQCWAHKPE 257
Query: 264 FRFTAEMLLD 273
R T L D
Sbjct: 258 DRPTFVALRD 267
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 10/190 (5%)
Query: 86 NLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILL 145
++ E A G+L D + K G+ L R+ + + EG+G++ ++H D+ N+LL
Sbjct: 86 KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ-VAEGMGYLESKRFIHRDLAARNLLL 144
Query: 146 VATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPL-YLAPETVVQHMQEAPSDIWAL 204
AT+ + KI D G+ + R P + APE++ SD W
Sbjct: 145 -ATRD---LVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMF 200
Query: 205 GCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPA 263
G + EM + G++ W+ I L I + LP P ++ + + +C+ KP
Sbjct: 201 GVTLWEMFTYGQEPWIGLNGSQI--LHKIDKEGERLPR-PEDCPQDIYNVMVQCWAHKPE 257
Query: 264 FRFTAEMLLD 273
R T L D
Sbjct: 258 DRPTFVALRD 267
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Query: 112 KDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKR 171
+D+ HF+ + +G+ + +H DV N+LL + VAKI D G+A+ +
Sbjct: 164 RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL----TNGHVAKIGDFGLARDIMNDSN 219
Query: 172 QKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAW---VVKEDCSID 227
+ R ++APE++ + SD+W+ G ++ E+ S G + +V
Sbjct: 220 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN-----S 274
Query: 228 QLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEML 271
+ + ++ D + + + P+ K ++ C+ +P R T + +
Sbjct: 275 KFYKLVKDGYQMAQ-PAFAPKNIYSIMQACWALEPTHRPTFQQI 317
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 62/137 (45%), Gaps = 20/137 (14%)
Query: 90 EYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQ 149
EY TL DLI N N ++ R F R ILE + +IH G +H ++KP NI + ++
Sbjct: 95 EYCENRTLYDLIHSENLNQQRDEYWRLF-RQILEALSYIHSQGIIHRNLKPXNIFIDESR 153
Query: 150 SGKFVAKIADLGVAKR-SRHCKRQKFD-----------PSMRGTPLYLAPETV--VQHMQ 195
+ KI D G+AK R K D S GT Y+A E + H
Sbjct: 154 N----VKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYN 209
Query: 196 EAPSDIWALGCVVLEML 212
E D ++LG + E +
Sbjct: 210 EKI-DXYSLGIIFFEXI 225
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 112/283 (39%), Gaps = 29/283 (10%)
Query: 10 RGRVIGQGSFGCVF--IAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
R +VIG G FG V+ + K S +P + EK+ D L +
Sbjct: 48 RQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYT-------EKQRVDFLGEAGIM 100
Query: 68 LECFGEEITMGENGEMAYN---LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEG 124
+ I E Y ++ EY G L + + +G + R I G
Sbjct: 101 GQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGE-FSVLQLVGMLRGIAAG 159
Query: 125 IGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPL- 183
+ ++ + YVH D+ NIL+ + V K++D G+++ + S P+
Sbjct: 160 MKYLANMNYVHRDLAARNILV----NSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIR 215
Query: 184 YLAPETVVQHMQEAPSDIWALGCVVLEMLS--GRQAWVVKEDCSIDQLFSIIGDEHSLP- 240
+ APE + + SD+W+ G V+ E+++ R W + S ++ I D LP
Sbjct: 216 WTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYW----ELSNHEVMKAINDGFRLPT 271
Query: 241 --EIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGVD 281
+ PS + + ++ R+P F +L D ++ D
Sbjct: 272 PMDCPSAIYQLMMQCWQQERARRPKFADIVSIL--DKLIRAPD 312
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 63/130 (48%), Gaps = 11/130 (8%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ EY G+L D ++ +G L + I EG+ I + Y+H D++ NIL+
Sbjct: 84 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS 143
Query: 147 ATQSGKFVAKIADLGVAK---RSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWA 203
T S KIAD G+A+ + + R+ ++ T APE + SD+W+
Sbjct: 144 DTLS----CKIADFGLARLIEDNEYTAREGAKFPIKWT----APEAINYGTFTIKSDVWS 195
Query: 204 LGCVVLEMLS 213
G ++ E+++
Sbjct: 196 FGILLTEIVT 205
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 17/100 (17%)
Query: 121 ILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG 180
+L GI H+H +G +H D+KP NI++ + + KI D G+A+ + S
Sbjct: 135 MLXGIKHLHSAGIIHRDLKPSNIVVKSDXT----LKILDFGLARTA--------GTSFMM 182
Query: 181 TP-----LYLAPETVVQHMQEAPSDIWALGCVVLEMLSGR 215
TP Y APE ++ + DIW++GC++ EM+ +
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 63/130 (48%), Gaps = 11/130 (8%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ EY G+L D ++ +G L + I EG+ I + Y+H D++ NIL+
Sbjct: 89 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS 148
Query: 147 ATQSGKFVAKIADLGVAK---RSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWA 203
T S KIAD G+A+ + + R+ ++ T APE + SD+W+
Sbjct: 149 DTLS----CKIADFGLARLIEDNEYTAREGAKFPIKWT----APEAINYGTFTIKSDVWS 200
Query: 204 LGCVVLEMLS 213
G ++ E+++
Sbjct: 201 FGILLTEIVT 210
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 63/130 (48%), Gaps = 11/130 (8%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ EY G+L D ++ +G L + I EG+ I + Y+H D++ NIL+
Sbjct: 90 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS 149
Query: 147 ATQSGKFVAKIADLGVAK---RSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWA 203
T S KIAD G+A+ + + R+ ++ T APE + SD+W+
Sbjct: 150 DTLS----CKIADFGLARLIEDNEYTAREGAKFPIKWT----APEAINYGTFTIKSDVWS 201
Query: 204 LGCVVLEMLS 213
G ++ E+++
Sbjct: 202 FGILLTEIVT 211
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 63/130 (48%), Gaps = 11/130 (8%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ EY G+L D ++ +G L + I EG+ I + Y+H D++ NIL+
Sbjct: 79 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS 138
Query: 147 ATQSGKFVAKIADLGVAK---RSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWA 203
T S KIAD G+A+ + + R+ ++ T APE + SD+W+
Sbjct: 139 DTLS----CKIADFGLARLIEDNEYTAREGAKFPIKWT----APEAINYGTFTIKSDVWS 190
Query: 204 LGCVVLEMLS 213
G ++ E+++
Sbjct: 191 FGILLTEIVT 200
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 17/99 (17%)
Query: 121 ILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG 180
+L GI H+H +G +H D+KP NI++ KI D G+A+ + S
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVV----KSDCTLKILDFGLARTA--------GTSFMM 182
Query: 181 TP-----LYLAPETVVQHMQEAPSDIWALGCVVLEMLSG 214
TP Y APE ++ + DIW++GC++ EM+ G
Sbjct: 183 TPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 17/99 (17%)
Query: 121 ILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG 180
+L GI H+H +G +H D+KP NI++ KI D G+A+ + S
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVV----KSDCTLKILDFGLARTA--------GTSFMM 182
Query: 181 TP-----LYLAPETVVQHMQEAPSDIWALGCVVLEMLSG 214
TP Y APE ++ + DIW++GC++ EM+ G
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 17/99 (17%)
Query: 121 ILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG 180
+L GI H+H +G +H D+KP NI++ KI D G+A+ + S
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVV----KSDCTLKILDFGLARTA--------GTSFMM 182
Query: 181 TP-----LYLAPETVVQHMQEAPSDIWALGCVVLEMLSG 214
TP Y APE ++ + DIW++GC++ EM+ G
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 17/100 (17%)
Query: 121 ILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG 180
+L GI H+H +G +H D+KP NI++ + + KI D G+A+ + S
Sbjct: 135 MLXGIKHLHSAGIIHRDLKPSNIVVKSDXT----LKILDFGLARTA--------GTSFMM 182
Query: 181 TP-----LYLAPETVVQHMQEAPSDIWALGCVVLEMLSGR 215
TP Y APE ++ + DIW++GC++ EM+ +
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 17/99 (17%)
Query: 121 ILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG 180
+L GI H+H +G +H D+KP NI++ KI D G+A+ + S
Sbjct: 136 MLCGIKHLHSAGIIHRDLKPSNIVV----KSDCTLKILDFGLARTA--------GTSFMM 183
Query: 181 TP-----LYLAPETVVQHMQEAPSDIWALGCVVLEMLSG 214
TP Y APE ++ + DIW++GC++ EM+ G
Sbjct: 184 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 91/212 (42%), Gaps = 24/212 (11%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ EY G+L D ++ +G L + I EG+ I + Y+H D++ NIL+
Sbjct: 92 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS 151
Query: 147 ATQSGKFVAKIADLGVAK---RSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWA 203
T S KIAD G+A+ + R+ ++ T APE + SD+W+
Sbjct: 152 DTLS----CKIADFGLARLIEDNEXTAREGAKFPIKWT----APEAINYGTFTIKSDVWS 203
Query: 204 LGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEHSLPEI-PSRVSKEARDFLRRCFVRK 261
G ++ E+++ GR + + + Q E + P +E +R C+ +
Sbjct: 204 FGILLTEIVTHGRIPYPGMTNPEVIQNL-----ERGYRMVRPDNCPEELYQLMRLCWKER 258
Query: 262 PAFRFTAEMLLDDPFVKGVDEELSRELEGDYS 293
P R T + +++ V E+ EG Y
Sbjct: 259 PEDRPTFD------YLRSVLEDFFTATEGQYQ 284
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 86 NLLLEYAAGGTLGDLIEKCNGN-GLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNIL 144
+L+ EYA DL + + N + + ++ F ++ G+ H +H D+KP N+L
Sbjct: 109 HLIFEYAEN----DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLL 164
Query: 145 L-VATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIW 202
L V+ S V KI D G+A+ RQ + T Y PE ++ + S DIW
Sbjct: 165 LSVSDASETPVLKIGDFGLARAFGIPIRQFTHEII--TLWYRPPEILLGSRHYSTSVDIW 222
Query: 203 ALGCVVLEMLSGRQAWVVKEDCSIDQLFSI 232
++ C+ EML + + D IDQLF I
Sbjct: 223 SIACIWAEMLM--KTPLFPGDSEIDQLFKI 250
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 88/206 (42%), Gaps = 23/206 (11%)
Query: 85 YNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNIL 144
YN ++ G +L DL + C+ K V ++ + ++H ++ DVKP+N L
Sbjct: 79 YNAMVLELLGPSLEDLFDLCD-RTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFL 137
Query: 145 L-VATQSGKFVAKIADLGVAKRSRHCKRQKFDP-----SMRGTPLYLAPETVVQHMQEAP 198
+ + V I D G+AK + +K P S+ GT Y++ T + Q
Sbjct: 138 IGRPGNKTQQVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRR 197
Query: 199 SDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDE----------HSLPEIPSRVSK 248
D+ ALG + + L G W + ++ + + IGD + PE+ + +
Sbjct: 198 DDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFPEMATYLR- 256
Query: 249 EARDFLRRC-FVRKPAFRFTAEMLLD 273
++RR F KP + + ++ D
Sbjct: 257 ----YVRRLDFFEKPDYDYLRKLFTD 278
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 112/276 (40%), Gaps = 56/276 (20%)
Query: 14 IGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLECFGE 73
IG GSFG V+ K + + ++ ++ P + F
Sbjct: 44 IGSGSFGTVYKGKWHGDVAV----------------------KILKVVDPTPEQFQAFRN 81
Query: 74 EI-TMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGL------PEKDVRHF-----TRCI 121
E+ + + + L + Y L + + C G+ L E + F R
Sbjct: 82 EVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQT 141
Query: 122 LEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAK-RSRHCKRQKFDPSMRG 180
+G+ ++H +H D+K +NI L KI D G+A +SR Q+ + G
Sbjct: 142 AQGMDYLHAKNIIHRDMKSNNIFL----HEGLTVKIGDFGLATVKSRWSGSQQVEQPT-G 196
Query: 181 TPLYLAPETVVQHMQEA-----PSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGD 235
+ L++APE + MQ+ SD+++ G V+ E+++G + + DQ+ ++G
Sbjct: 197 SVLWMAPEVI--RMQDNNPFSFQSDVYSYGIVLYELMTGELPY--SHINNRDQIIFMVGR 252
Query: 236 EHSLPEI-------PSRVSKEARDFLRRCFVRKPAF 264
++ P++ P + + D +++ +P F
Sbjct: 253 GYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLF 288
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 17/100 (17%)
Query: 121 ILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG 180
+L GI H+H +G +H D+KP NI++ + + KI D G+A+ + S
Sbjct: 128 MLXGIKHLHSAGIIHRDLKPSNIVVKSDXT----LKILDFGLARTA--------GTSFMM 175
Query: 181 TP-----LYLAPETVVQHMQEAPSDIWALGCVVLEMLSGR 215
TP Y APE ++ + DIW++GC++ EM+ +
Sbjct: 176 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 17/99 (17%)
Query: 121 ILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG 180
+L GI H+H +G +H D+KP NI++ KI D G+A+ + S
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVV----KSDCTLKILDFGLARTA--------GTSFMM 182
Query: 181 TP-----LYLAPETVVQHMQEAPSDIWALGCVVLEMLSG 214
TP Y APE ++ + DIW++GC++ EM+ G
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 91/212 (42%), Gaps = 24/212 (11%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ EY G+L D ++ +G L + I EG+ I + Y+H D++ NIL+
Sbjct: 84 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS 143
Query: 147 ATQSGKFVAKIADLGVAK---RSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWA 203
T S KIAD G+A+ + R+ ++ T APE + SD+W+
Sbjct: 144 DTLS----CKIADFGLARLIEDAEXTAREGAKFPIKWT----APEAINYGTFTIKSDVWS 195
Query: 204 LGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEHSLPEI-PSRVSKEARDFLRRCFVRK 261
G ++ E+++ GR + + + Q E + P +E +R C+ +
Sbjct: 196 FGILLTEIVTHGRIPYPGMTNPEVIQNL-----ERGYRMVRPDNCPEELYQLMRLCWKER 250
Query: 262 PAFRFTAEMLLDDPFVKGVDEELSRELEGDYS 293
P R T + +++ V E+ EG Y
Sbjct: 251 PEDRPTFD------YLRSVLEDFFTATEGQYQ 276
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 91/212 (42%), Gaps = 24/212 (11%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ EY G+L D ++ +G L + I EG+ I + Y+H D++ NIL+
Sbjct: 84 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS 143
Query: 147 ATQSGKFVAKIADLGVAK---RSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWA 203
T S KIAD G+A+ + R+ ++ T APE + SD+W+
Sbjct: 144 DTLS----CKIADFGLARLIEDNEXTAREGAKFPIKWT----APEAINYGTFTIKSDVWS 195
Query: 204 LGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEHSLPEI-PSRVSKEARDFLRRCFVRK 261
G ++ E+++ GR + + + Q E + P +E +R C+ +
Sbjct: 196 FGILLTEIVTHGRIPYPGMTNPEVIQNL-----ERGYRMVRPDNCPEELYQLMRLCWKER 250
Query: 262 PAFRFTAEMLLDDPFVKGVDEELSRELEGDYS 293
P R T + +++ V E+ EG Y
Sbjct: 251 PEDRPTFD------YLRSVLEDFFTATEGQYQ 276
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 69/163 (42%), Gaps = 34/163 (20%)
Query: 107 NGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRS 166
N L ++VR + + + + IH G VH DVKP N L + K+ + D G+A+ +
Sbjct: 112 NSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSN-FLYNRRLKKYA--LVDFGLAQGT 168
Query: 167 RHCK---------------------------RQKFDPSMRGTPLYLAPETVVQ-HMQEAP 198
K RQ+ P GTP + APE + + Q
Sbjct: 169 HDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRA-GTPGFRAPEVLTKCPNQTTA 227
Query: 199 SDIWALGCVVLEMLSGRQAWVVKED--CSIDQLFSIIGDEHSL 239
D+W+ G + L +LSGR + D ++ Q+ +I G ++
Sbjct: 228 IDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETI 270
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 91/200 (45%), Gaps = 23/200 (11%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ EY + G+L D ++ G L + I G+ ++ YVH D++ NIL+
Sbjct: 255 IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV- 313
Query: 147 ATQSGKFVAKIADLGVAK---RSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWA 203
V K+AD G+A+ + + RQ ++ T APE + SD+W+
Sbjct: 314 ---GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----APEAALYGRFTIKSDVWS 366
Query: 204 LGCVVLEMLS-GRQAW--VVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVR 260
G ++ E+ + GR + +V + +DQ + + +P P + D + +C+ +
Sbjct: 367 FGILLTELTTKGRVPYPGMVNREV-LDQ----VERGYRMP-CPPECPESLHDLMCQCWRK 420
Query: 261 KPAFRFTAEML---LDDPFV 277
+P R T E L L+D F
Sbjct: 421 EPEERPTFEYLQAFLEDYFT 440
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 91/212 (42%), Gaps = 24/212 (11%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ EY G+L D ++ +G L + I EG+ I + Y+H D++ NIL+
Sbjct: 90 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS 149
Query: 147 ATQSGKFVAKIADLGVAK---RSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWA 203
T S KIAD G+A+ + R+ ++ T APE + SD+W+
Sbjct: 150 DTLS----CKIADFGLARLIEDNEXTAREGAKFPIKWT----APEAINYGTFTIKSDVWS 201
Query: 204 LGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEHSLPEI-PSRVSKEARDFLRRCFVRK 261
G ++ E+++ GR + + + Q E + P +E +R C+ +
Sbjct: 202 FGILLTEIVTHGRIPYPGMTNPEVIQNL-----ERGYRMVRPDNCPEELYQLMRLCWKER 256
Query: 262 PAFRFTAEMLLDDPFVKGVDEELSRELEGDYS 293
P R T + +++ V E+ EG Y
Sbjct: 257 PEDRPTFD------YLRSVLEDFFTATEGQYQ 282
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 91/200 (45%), Gaps = 23/200 (11%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ EY + G+L D ++ G L + I G+ ++ YVH D++ NIL+
Sbjct: 255 IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV- 313
Query: 147 ATQSGKFVAKIADLGVAK---RSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWA 203
V K+AD G+A+ + + RQ ++ T APE + SD+W+
Sbjct: 314 ---GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----APEAALYGRFTIKSDVWS 366
Query: 204 LGCVVLEMLS-GRQAW--VVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVR 260
G ++ E+ + GR + +V + +DQ + + +P P + D + +C+ +
Sbjct: 367 FGILLTELTTKGRVPYPGMVNREV-LDQ----VERGYRMP-CPPECPESLHDLMCQCWRK 420
Query: 261 KPAFRFTAEML---LDDPFV 277
+P R T E L L+D F
Sbjct: 421 EPEERPTFEYLQAFLEDYFT 440
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/278 (19%), Positives = 111/278 (39%), Gaps = 35/278 (12%)
Query: 12 RVIGQGSFGCVFIAK----PKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
R +G+G+FG VF+A+ + L + Q+E E+ NL +
Sbjct: 21 RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQH-EHI 79
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNG-------NGLPEK-------- 112
++ +G G+ + ++ EY G L + + +G +G P +
Sbjct: 80 VKFYG---VCGDGDPLI--MVFEYMKHGDLNKFL-RAHGPDAMILVDGQPRQAKGELGLS 133
Query: 113 DVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQ 172
+ H I G+ ++ +VH D+ N L+ A + KI D G+++
Sbjct: 134 QMLHIASQIASGMVYLASQHFVHRDLATRNCLVGAN----LLVKIGDFGMSRDVYSTDYY 189
Query: 173 KFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSIDQLFS 231
+ ++ PE+++ SD+W+ G ++ E+ + G+Q W + + + +
Sbjct: 190 RVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECIT 249
Query: 232 IIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAE 269
+ + E P KE D + C+ R+P R +
Sbjct: 250 ----QGRVLERPRVCPKEVYDVMLGCWQREPQQRLNIK 283
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 91/200 (45%), Gaps = 23/200 (11%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ EY + G+L D ++ G L + I G+ ++ YVH D++ NIL+
Sbjct: 338 IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV- 396
Query: 147 ATQSGKFVAKIADLGVAK---RSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWA 203
V K+AD G+A+ + + RQ ++ T APE + SD+W+
Sbjct: 397 ---GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----APEAALYGRFTIKSDVWS 449
Query: 204 LGCVVLEMLS-GRQAW--VVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVR 260
G ++ E+ + GR + +V + +DQ + + +P P + D + +C+ +
Sbjct: 450 FGILLTELTTKGRVPYPGMVNREV-LDQ----VERGYRMP-CPPECPESLHDLMCQCWRK 503
Query: 261 KPAFRFTAEML---LDDPFV 277
+P R T E L L+D F
Sbjct: 504 EPEERPTFEYLQAFLEDYFT 523
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 91/232 (39%), Gaps = 51/232 (21%)
Query: 65 PFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEG 124
P +++ F +G+ +++EY G +L ++ G LP + + IL
Sbjct: 139 PSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSL----KRSKGQKLPVAEAIAYLLEILPA 194
Query: 125 IGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLY 184
+ ++H G V+ D+KP+NI+L Q K+ DLG R + GTP +
Sbjct: 195 LSYLHSIGLVYNDLKPENIMLTEEQ-----LKLIDLGAVSRINSFG------YLYGTPGF 243
Query: 185 LAPETVVQHMQEAPSDIWALGCVV------LEMLSGRQAWVVKEDCSIDQLFSIIGDEHS 238
APE +V+ +DI+ +G + L +GR + ED + + + G
Sbjct: 244 QAPE-IVRTGPTVATDIYTVGRTLAALTLDLPTRNGRYVDGLPEDDPVLKTYDSYG---- 298
Query: 239 LPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGVDEELSRELEG 290
LRR P RFT EE+S +L G
Sbjct: 299 -------------RLLRRAIDPDPRQRFTTA------------EEMSAQLTG 325
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 91/200 (45%), Gaps = 23/200 (11%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ EY + G+L D ++ G L + I G+ ++ YVH D++ NIL+
Sbjct: 82 IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV- 140
Query: 147 ATQSGKFVAKIADLGVAK---RSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWA 203
V K+AD G+A+ + + RQ ++ T APE + SD+W+
Sbjct: 141 ---GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----APEAALYGRFTIKSDVWS 193
Query: 204 LGCVVLEMLS-GRQAW--VVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVR 260
G ++ E+ + GR + +V + +DQ + + +P P + D + +C+ +
Sbjct: 194 FGILLTELTTKGRVPYPGMVNREV-LDQ----VERGYRMP-CPPECPESLHDLMCQCWRK 247
Query: 261 KPAFRFTAEML---LDDPFV 277
+P R T E L L+D F
Sbjct: 248 EPEERPTFEYLQAFLEDYFT 267
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 63/125 (50%), Gaps = 8/125 (6%)
Query: 109 LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
L + D+R + +L+ + + H G +H DVKP N+++ Q ++ D G+A+
Sbjct: 134 LTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKK---LRLIDWGLAEFYHP 190
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQH-MQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSID 227
+ + R + PE +V + M + D+W+LGC++ M+ R+ + +D + D
Sbjct: 191 AQEYNVRVASR---YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQD-NYD 246
Query: 228 QLFSI 232
QL I
Sbjct: 247 QLVRI 251
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 63/125 (50%), Gaps = 8/125 (6%)
Query: 109 LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
L + D+R + +L+ + + H G +H DVKP N+++ Q ++ D G+A+
Sbjct: 129 LTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKK---LRLIDWGLAEFYHP 185
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQH-MQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSID 227
+ + R + PE +V + M + D+W+LGC++ M+ R+ + +D + D
Sbjct: 186 AQEYNVRVASR---YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQD-NYD 241
Query: 228 QLFSI 232
QL I
Sbjct: 242 QLVRI 246
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 89/197 (45%), Gaps = 23/197 (11%)
Query: 90 EYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQ 149
EY + G+L D ++ G L + I G+ ++ YVH D++ NIL+
Sbjct: 258 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---- 313
Query: 150 SGKFVAKIADLGVAK---RSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGC 206
V K+AD G+A+ + + RQ ++ T APE + SD+W+ G
Sbjct: 314 GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----APEAALYGRFTIKSDVWSFGI 369
Query: 207 VVLEMLS-GRQAW--VVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPA 263
++ E+ + GR + +V + +DQ + + +P P + D + +C+ ++P
Sbjct: 370 LLTELTTKGRVPYPGMVNREV-LDQ----VERGYRMP-CPPECPESLHDLMCQCWRKEPE 423
Query: 264 FRFTAEML---LDDPFV 277
R T E L L+D F
Sbjct: 424 ERPTFEYLQAFLEDYFT 440
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 6/128 (4%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ EY G+L + K + + R I G+ ++ D GYVH D+ NIL+
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI- 180
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPL-YLAPETVVQHMQEAPSDIWALG 205
+ V K++D G+A+ + P+ + +PE + + SD+W+ G
Sbjct: 181 ---NSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 237
Query: 206 CVVLEMLS 213
V+ E++S
Sbjct: 238 IVLWEVMS 245
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 91/200 (45%), Gaps = 23/200 (11%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ EY G+L D ++ G L + + I G+ ++ YVH D++ NIL+
Sbjct: 86 IVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILV- 144
Query: 147 ATQSGKFVAKIADLGVAK---RSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWA 203
V K+AD G+A+ + + RQ ++ T APE + SD+W+
Sbjct: 145 ---GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----APEAALYGRFTIKSDVWS 197
Query: 204 LGCVVLEMLS-GRQAW--VVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVR 260
G ++ E+ + GR + +V + +DQ + + +P P + D + +C+ +
Sbjct: 198 FGILLTELTTKGRVPYPGMVNREV-LDQ----VERGYRMP-CPPECPESLHDLMCQCWRK 251
Query: 261 KPAFRFTAEML---LDDPFV 277
+P R T E L L+D F
Sbjct: 252 EPEERPTFEYLQAFLEDYFT 271
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 61/128 (47%), Gaps = 6/128 (4%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ EY G+L ++K +G + R I G+ ++ D GYVH D+ NIL+
Sbjct: 100 IVTEYMENGSLDTFLKKNDGQ-FTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILI- 157
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPL-YLAPETVVQHMQEAPSDIWALG 205
+ V K++D G+++ + P+ + APE + + SD+W+ G
Sbjct: 158 ---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYG 214
Query: 206 CVVLEMLS 213
V+ E++S
Sbjct: 215 IVMWEVVS 222
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 121 ILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG 180
+L GI H+H +G +H D+KP NI++ KI D G+A R
Sbjct: 137 MLCGIKHLHSAGIIHRDLKPSNIVV----KSDCTLKILDFGLA---RTAGTSFMMVPFVV 189
Query: 181 TPLYLAPETVVQHMQEAPSDIWALGCVVLEMLSG 214
T Y APE ++ + DIW++GC++ EM+ G
Sbjct: 190 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 62/133 (46%), Gaps = 12/133 (9%)
Query: 80 NGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSG--YVHCD 137
G+ L+ E GTL +++ + K +R + R IL+G+ +H +H D
Sbjct: 99 KGKKCIVLVTELXTSGTLKTYLKRFKVXKI--KVLRSWCRQILKGLQFLHTRTPPIIHRD 156
Query: 138 VKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEA 197
+K DNI + KI DLG+A KR F ++ GTP + APE + E+
Sbjct: 157 LKCDNIFITGPTGS---VKIGDLGLAT----LKRASFAKAVIGTPEFXAPEXYEEKYDES 209
Query: 198 PSDIWALGCVVLE 210
D++A G LE
Sbjct: 210 -VDVYAFGXCXLE 221
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/308 (20%), Positives = 122/308 (39%), Gaps = 62/308 (20%)
Query: 12 RVIGQGSFGCVFIAKPKSNS-----SFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPF 66
R +G+G + VF A +N+ L P+ +++E ++ +NL G P
Sbjct: 43 RKLGRGKYSEVFEAINITNNEKVVVKILKPV---------KKNKIKREIKILENLRGGPN 93
Query: 67 VLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIG 126
++ + + L+ E+ L + L + D+R + IL+ +
Sbjct: 94 IITLAD---IVKDPVSRTPALVFEHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALD 145
Query: 127 HIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLA 186
+ H G +H DVKP N+++ ++ D G+A+ + Q+++ + + +
Sbjct: 146 YCHSMGIMHRDVKPHNVMIDHEHRK---LRLIDWGLAE--FYHPGQEYNVRV-ASRYFKG 199
Query: 187 PETVVQH-MQEAPSDIWALGCVVLEMLSGRQA-------------------------WVV 220
PE +V + M + D+W+LGC++ M+ ++ ++
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 259
Query: 221 KEDCSIDQLFSIIGDEHSLP--------EIPSRVSKEARDFLRRCFVRKPAFRFTAEMLL 272
K + +D F+ I HS E VS EA DFL + R TA +
Sbjct: 260 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAM 319
Query: 273 DDPFVKGV 280
+ P+ V
Sbjct: 320 EHPYFYTV 327
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 17/99 (17%)
Query: 121 ILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG 180
+L GI H+H +G +H D+KP NI++ + + KI D G+A+ + S
Sbjct: 135 MLVGIKHLHSAGIIHRDLKPSNIVVKSDAT----LKILDFGLARTA--------GTSFMM 182
Query: 181 TP-----LYLAPETVVQHMQEAPSDIWALGCVVLEMLSG 214
TP Y APE ++ + DIW++G ++ EM+ G
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 17/100 (17%)
Query: 121 ILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG 180
+L GI H+H +G +H D+KP NI++ + + KI D G+A+ + S
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDXT----LKILDFGLARTA--------GTSFMM 182
Query: 181 TP-----LYLAPETVVQHMQEAPSDIWALGCVVLEMLSGR 215
TP Y APE ++ + DIW++GC++ EM+ +
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 17/99 (17%)
Query: 121 ILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG 180
+L GI H+H +G +H D+KP NI++ + + KI D G+A+ + S
Sbjct: 135 MLVGIKHLHSAGIIHRDLKPSNIVVKSDAT----LKILDFGLARTA--------GTSFMM 182
Query: 181 TP-----LYLAPETVVQHMQEAPSDIWALGCVVLEMLSG 214
TP Y APE ++ + DIW++G ++ EM+ G
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 86/184 (46%), Gaps = 14/184 (7%)
Query: 98 GDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKI 157
G ++E L E R + + +++GI ++H +H D+KP N+L+ + G KI
Sbjct: 123 GPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLV--GEDGHI--KI 178
Query: 158 ADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQ---EAPSDIWALGCVVLEMLSG 214
AD GV+ + + GTP ++APE++ + + D+WA+G + + G
Sbjct: 179 ADFGVSNEFKGS--DALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFG 236
Query: 215 RQAWVVKEDCSIDQLFSIIGDEH-SLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLD 273
+ ++ D I L S I + P+ P ++++ +D + R + P R +
Sbjct: 237 QCPFM---DERIMCLHSKIKSQALEFPDQPD-IAEDLKDLITRMLDKNPESRIVVPEIKL 292
Query: 274 DPFV 277
P+V
Sbjct: 293 HPWV 296
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 11/130 (8%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ EY G+L D ++ +G L + I EG+ I + Y+H D++ NIL+
Sbjct: 85 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS 144
Query: 147 ATQSGKFVAKIADLGVAK---RSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWA 203
T S KIAD G+A+ + R+ ++ T APE + SD+W+
Sbjct: 145 DTLS----CKIADFGLARLIEDNEXTAREGAKFPIKWT----APEAINYGTFTIKSDVWS 196
Query: 204 LGCVVLEMLS 213
G ++ E+++
Sbjct: 197 FGILLTEIVT 206
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 11/130 (8%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ EY G+L D ++ +G L + I EG+ I + Y+H D++ NIL+
Sbjct: 84 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS 143
Query: 147 ATQSGKFVAKIADLGVAK---RSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWA 203
T S KIAD G+A+ + R+ ++ T APE + SD+W+
Sbjct: 144 DTLS----CKIADFGLARLIEDNEXTAREGAKFPIKWT----APEAINYGTFTIKSDVWS 195
Query: 204 LGCVVLEMLS 213
G ++ E+++
Sbjct: 196 FGILLTEIVT 205
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 11/130 (8%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ EY G+L D ++ +G L + I EG+ I + Y+H D++ NIL+
Sbjct: 86 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS 145
Query: 147 ATQSGKFVAKIADLGVAK---RSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWA 203
T S KIAD G+A+ + R+ ++ T APE + SD+W+
Sbjct: 146 DTLS----CKIADFGLARLIEDNEXTAREGAKFPIKWT----APEAINYGTFTIKSDVWS 197
Query: 204 LGCVVLEMLS 213
G ++ E+++
Sbjct: 198 FGILLTEIVT 207
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 11/130 (8%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ EY G+L D ++ +G L + I EG+ I + Y+H D++ NIL+
Sbjct: 93 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS 152
Query: 147 ATQSGKFVAKIADLGVAK---RSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWA 203
T S KIAD G+A+ + R+ ++ T APE + SD+W+
Sbjct: 153 DTLS----CKIADFGLARLIEDNEXTAREGAKFPIKWT----APEAINYGTFTIKSDVWS 204
Query: 204 LGCVVLEMLS 213
G ++ E+++
Sbjct: 205 FGILLTEIVT 214
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 86/207 (41%), Gaps = 35/207 (16%)
Query: 97 LGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAK 156
L + CNG+ PE V+ F +L+G+G H +H D+KP N+L+ ++G+ K
Sbjct: 87 LKKYFDSCNGDLDPEI-VKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLI--NRNGEL--K 141
Query: 157 IADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVV--QHMQEAPSDIWALGCVVLEMLSG 214
+AD G+A+ R S L+ P V+ + D+W+ GC+ E+ +
Sbjct: 142 LADFGLARAFGIPVRCY---SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANA 198
Query: 215 RQAWVVKEDC--SIDQLFSIIG--------------DEHSLPEIPS---------RVSKE 249
+ D + ++F ++G D P P+ +++
Sbjct: 199 ARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNAT 258
Query: 250 ARDFLRRCFVRKPAFRFTAEMLLDDPF 276
RD L+ P R +AE L P+
Sbjct: 259 GRDLLQNLLKCNPVQRISAEEALQHPY 285
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 17/100 (17%)
Query: 121 ILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG 180
+L GI H+H +G +H D+KP NI++ + + KI D G+A+ + S
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDXT----LKILDFGLARTA--------GTSFMM 182
Query: 181 TP-----LYLAPETVVQHMQEAPSDIWALGCVVLEMLSGR 215
TP Y APE ++ + DIW++GC++ EM+ +
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 91/200 (45%), Gaps = 23/200 (11%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
+++EY + G+L D ++ G L + I G+ ++ YVH D++ NIL+
Sbjct: 89 IVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV- 147
Query: 147 ATQSGKFVAKIADLGVAK---RSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWA 203
V K+AD G+A+ + + RQ ++ T APE + SD+W+
Sbjct: 148 ---GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----APEAALYGRFTIKSDVWS 200
Query: 204 LGCVVLEMLS-GRQAW--VVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVR 260
G ++ E+ + GR + +V + +DQ + + +P P + D + +C+ +
Sbjct: 201 FGILLTELTTKGRVPYPGMVNREV-LDQ----VERGYRMP-CPPECPESLHDLMCQCWRK 254
Query: 261 KPAFRFTAEML---LDDPFV 277
P R T E L L+D F
Sbjct: 255 DPEERPTFEYLQAFLEDYFT 274
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 82/184 (44%), Gaps = 15/184 (8%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
+++E+ G L + K +G + R I G+ ++ D GYVH D+ NIL+
Sbjct: 121 IVIEFMENGALDAFLRKHDGQ-FTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILV- 178
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPL-YLAPETVVQHMQEAPSDIWALG 205
+ V K++D G+++ + + P+ + APE + + SD+W+ G
Sbjct: 179 ---NSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYG 235
Query: 206 CVVLEMLS--GRQAWVVKEDCSIDQLFSIIGDEHSLP---EIPSRVSKEARDFLRRCFVR 260
V+ E++S R W D S + I + + LP + P+ + + D ++
Sbjct: 236 IVMWEVMSYGERPYW----DMSNQDVIKAIEEGYRLPAPMDCPAGLHQLMLDCWQKERAE 291
Query: 261 KPAF 264
+P F
Sbjct: 292 RPKF 295
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 63/130 (48%), Gaps = 11/130 (8%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ EY G+L D ++ +G L + I EG+ I + Y+H +++ NIL+
Sbjct: 80 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRNLRAANILVS 139
Query: 147 ATQSGKFVAKIADLGVAK---RSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWA 203
T S KIAD G+A+ + + R+ ++ T APE + SD+W+
Sbjct: 140 DTLS----CKIADFGLARLIEDNEYTAREGAKFPIKWT----APEAINYGTFTIKSDVWS 191
Query: 204 LGCVVLEMLS 213
G ++ E+++
Sbjct: 192 FGILLTEIVT 201
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 86/200 (43%), Gaps = 13/200 (6%)
Query: 74 EITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGY 133
++ E + Y +++EY G + ++++ P + +++G+ ++H G
Sbjct: 73 DVLYNEEKQKMY-MVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGI 130
Query: 134 VHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETV--V 191
VH D+KP N+LL T G KI+ LGVA+ + +G+P + PE +
Sbjct: 131 VHKDIKPGNLLL--TTGGTL--KISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGL 186
Query: 192 QHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEAR 251
DIW+ G + + +G + E +I +LF IG IP
Sbjct: 187 DTFSGFKVDIWSAGVTLYNITTGLYPF---EGDNIYKLFENIGKGSY--AIPGDCGPPLS 241
Query: 252 DFLRRCFVRKPAFRFTAEML 271
D L+ +PA RF+ +
Sbjct: 242 DLLKGMLEYEPAKRFSIRQI 261
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 97/240 (40%), Gaps = 32/240 (13%)
Query: 52 QKEKEVFDNLN------GCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCN 105
Q++K + +L+ CPF + +G G+ L + + +I+K
Sbjct: 74 QEQKRLLXDLDISXRTVDCPFTVTFYGALFREGDV--WICXELXDTSLDKFYKQVIDK-- 129
Query: 106 GNGLPEKDVRHFTRCILEGIGHIHDS-GYVHCDVKPDNILLVATQSGKFVAKIADLGVAK 164
G +PE + I++ + H+H +H DVKP N+L+ A K D G++
Sbjct: 130 GQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQ----VKXCDFGISG 185
Query: 165 RSRHCKRQKFDPSMRGTPLYLAPETVVQHMQE----APSDIWALGCVVLEMLSGR---QA 217
+ D G Y APE + + + SDIW+LG +E+ R +
Sbjct: 186 YLVDDVAKDID---AGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDS 242
Query: 218 WVVKEDCSIDQLFSIIGDEHSLPEIPS-RVSKEARDFLRRCFVRKPAFRFTAEMLLDDPF 276
W QL ++ E P++P+ + S E DF +C + R T L PF
Sbjct: 243 W----GTPFQQLKQVV--EEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELXQHPF 296
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 110/286 (38%), Gaps = 50/286 (17%)
Query: 12 RVIGQGSFGCVFIAK-----PKSNSSFLPPLMXXXXXXXXXXXXLQKEKEV---FDNLNG 63
R IG+G+FG VF A+ P + + M Q+E + FDN N
Sbjct: 53 RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNI 112
Query: 64 CPFVLEC-FGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGN---GLPEKDVRH--- 116
+ C G+ + LL EY A G L + + + + L D+
Sbjct: 113 VKLLGVCAVGKPMC----------LLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRAR 162
Query: 117 ----------------FTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADL 160
R + G+ ++ + +VH D+ N L+ V KIAD
Sbjct: 163 VSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLV----GENMVVKIADF 218
Query: 161 GVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWV 219
G+++ K D + ++ PE++ + SD+WA G V+ E+ S G Q +
Sbjct: 219 GLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYY 278
Query: 220 VKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFR 265
+ +++ + D + L P E + +R C+ + PA R
Sbjct: 279 ---GMAHEEVIYYVRDGNIL-ACPENCPLELYNLMRLCWSKLPADR 320
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
Query: 121 ILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG 180
+L GI H+H +G +H D+KP NI++ KI D G+A+ + P +
Sbjct: 133 MLCGIKHLHSAGIIHRDLKPSNIVV----KSDCTLKILDFGLARTA--STNFMMTPYV-V 185
Query: 181 TPLYLAPETVVQHMQEAPSDIWALGCVVLEMLSG 214
T Y APE ++ + DIW++GC++ E++ G
Sbjct: 186 TRYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 66/134 (49%), Gaps = 7/134 (5%)
Query: 84 AYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNI 143
++ L++E A G L +++ + +K++ + G+ ++ +S +VH D+ N+
Sbjct: 101 SWMLVMEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNV 158
Query: 144 LLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPL-YLAPETVVQHMQEAPSDIW 202
LLV AKI+D G++K R + + P+ + APE + + + SD+W
Sbjct: 159 LLVTQH----YAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 214
Query: 203 ALGCVVLEMLSGRQ 216
+ G ++ E S Q
Sbjct: 215 SFGVLMWEAFSYGQ 228
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 66/134 (49%), Gaps = 7/134 (5%)
Query: 84 AYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNI 143
++ L++E A G L +++ + +K++ + G+ ++ +S +VH D+ N+
Sbjct: 101 SWMLVMEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNV 158
Query: 144 LLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPL-YLAPETVVQHMQEAPSDIW 202
LLV AKI+D G++K R + + P+ + APE + + + SD+W
Sbjct: 159 LLVTQH----YAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 214
Query: 203 ALGCVVLEMLSGRQ 216
+ G ++ E S Q
Sbjct: 215 SFGVLMWEAFSYGQ 228
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 66/134 (49%), Gaps = 7/134 (5%)
Query: 84 AYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNI 143
++ L++E A G L +++ + +K++ + G+ ++ +S +VH D+ N+
Sbjct: 81 SWMLVMEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNV 138
Query: 144 LLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPL-YLAPETVVQHMQEAPSDIW 202
LLV AKI+D G++K R + + P+ + APE + + + SD+W
Sbjct: 139 LLVTQH----YAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 194
Query: 203 ALGCVVLEMLSGRQ 216
+ G ++ E S Q
Sbjct: 195 SFGVLMWEAFSYGQ 208
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 59/128 (46%), Gaps = 6/128 (4%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ EY G+L + K + + R I G+ ++ D GYVH D+ NIL+
Sbjct: 94 IVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI- 151
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPL-YLAPETVVQHMQEAPSDIWALG 205
+ V K++D G+++ + P+ + +PE + + SD+W+ G
Sbjct: 152 ---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 208
Query: 206 CVVLEMLS 213
V+ E++S
Sbjct: 209 IVLWEVMS 216
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 66/134 (49%), Gaps = 7/134 (5%)
Query: 84 AYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNI 143
++ L++E A G L +++ + +K++ + G+ ++ +S +VH D+ N+
Sbjct: 91 SWMLVMEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNV 148
Query: 144 LLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPL-YLAPETVVQHMQEAPSDIW 202
LLV AKI+D G++K R + + P+ + APE + + + SD+W
Sbjct: 149 LLVTQH----YAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 204
Query: 203 ALGCVVLEMLSGRQ 216
+ G ++ E S Q
Sbjct: 205 SFGVLMWEAFSYGQ 218
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 66/134 (49%), Gaps = 7/134 (5%)
Query: 84 AYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNI 143
++ L++E A G L +++ + +K++ + G+ ++ +S +VH D+ N+
Sbjct: 99 SWMLVMEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNV 156
Query: 144 LLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPL-YLAPETVVQHMQEAPSDIW 202
LLV AKI+D G++K R + + P+ + APE + + + SD+W
Sbjct: 157 LLVTQH----YAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 212
Query: 203 ALGCVVLEMLSGRQ 216
+ G ++ E S Q
Sbjct: 213 SFGVLMWEAFSYGQ 226
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 87/206 (42%), Gaps = 23/206 (11%)
Query: 85 YNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNIL 144
YN ++ G +L DL + C+ K V ++ + ++H ++ DVKP+N L
Sbjct: 100 YNAMVLELLGPSLEDLFDLCD-RTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFL 158
Query: 145 L-VATQSGKFVAKIADLGVAKRSRHCKRQKFDP-----SMRGTPLYLAPETVVQHMQEAP 198
+ + V I D +AK + +K P S+ GT Y++ T + Q
Sbjct: 159 IGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRR 218
Query: 199 SDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDE----------HSLPEIPSRVSK 248
D+ ALG + + L G W + ++ + + IGD + PE+ + +
Sbjct: 219 DDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFPEMATYLR- 277
Query: 249 EARDFLRRC-FVRKPAFRFTAEMLLD 273
++RR F KP + + ++ D
Sbjct: 278 ----YVRRLDFFEKPDYDYLRKLFTD 299
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 66/134 (49%), Gaps = 7/134 (5%)
Query: 84 AYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNI 143
++ L++E A G L +++ + +K++ + G+ ++ +S +VH D+ N+
Sbjct: 85 SWMLVMEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNV 142
Query: 144 LLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPL-YLAPETVVQHMQEAPSDIW 202
LLV AKI+D G++K R + + P+ + APE + + + SD+W
Sbjct: 143 LLVTQH----YAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 198
Query: 203 ALGCVVLEMLSGRQ 216
+ G ++ E S Q
Sbjct: 199 SFGVLMWEAFSYGQ 212
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 66/134 (49%), Gaps = 7/134 (5%)
Query: 84 AYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNI 143
++ L++E A G L +++ + +K++ + G+ ++ +S +VH D+ N+
Sbjct: 85 SWMLVMEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNV 142
Query: 144 LLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPL-YLAPETVVQHMQEAPSDIW 202
LLV AKI+D G++K R + + P+ + APE + + + SD+W
Sbjct: 143 LLVTQH----YAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 198
Query: 203 ALGCVVLEMLSGRQ 216
+ G ++ E S Q
Sbjct: 199 SFGVLMWEAFSYGQ 212
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 20/140 (14%)
Query: 121 ILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG 180
+L GI H+H +G +H D+KP NI++ KI D G+A+ + S
Sbjct: 173 MLCGIKHLHSAGIIHRDLKPSNIVV----KSDCTLKILDFGLARTA--------GTSFMM 220
Query: 181 TP-----LYLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGD 235
TP Y APE ++ + DIW++GC++ EM+ + + ++ IDQ +I
Sbjct: 221 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD--YIDQWNKVIEQ 278
Query: 236 EHS-LPEIPSRVSKEARDFL 254
+ PE ++ R+++
Sbjct: 279 LGTPCPEFMKKLQPTVRNYV 298
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 66/134 (49%), Gaps = 7/134 (5%)
Query: 84 AYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNI 143
++ L++E A G L +++ + +K++ + G+ ++ +S +VH D+ N+
Sbjct: 79 SWMLVMEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNV 136
Query: 144 LLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPL-YLAPETVVQHMQEAPSDIW 202
LLV AKI+D G++K R + + P+ + APE + + + SD+W
Sbjct: 137 LLVTQH----YAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 192
Query: 203 ALGCVVLEMLSGRQ 216
+ G ++ E S Q
Sbjct: 193 SFGVLMWEAFSYGQ 206
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 12/157 (7%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ EY G+L + K +G + R I G+ ++ D YVH D+ NIL+
Sbjct: 92 IITEYMENGSLDAFLRKNDGR-FTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILV- 149
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPL-YLAPETVVQHMQEAPSDIWALG 205
+ V K++D G+++ + P+ + APE + + SD+W+ G
Sbjct: 150 ---NSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYG 206
Query: 206 CVVLEMLS--GRQAWVVKEDCSIDQLFSIIGDEHSLP 240
V+ E++S R W D S + I + + LP
Sbjct: 207 IVMWEVMSYGERPYW----DMSNQDVIKAIEEGYRLP 239
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 59/128 (46%), Gaps = 6/128 (4%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ EY G+L + K + + R I G+ ++ D GYVH D+ NIL+
Sbjct: 111 IVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI- 168
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPL-YLAPETVVQHMQEAPSDIWALG 205
+ V K++D G+++ + P+ + +PE + + SD+W+ G
Sbjct: 169 ---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 225
Query: 206 CVVLEMLS 213
V+ E++S
Sbjct: 226 IVLWEVMS 233
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 84/189 (44%), Gaps = 23/189 (12%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ E+ G+L + + +G + R I G+ ++ D YVH D+ NIL+
Sbjct: 111 IITEFMENGSLDSFLRQNDGQ-FTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILV- 168
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGT-----PL-YLAPETVVQHMQEAPSD 200
+ V K++D G+ SR + DP+ P+ + APE + + SD
Sbjct: 169 ---NSNLVCKVSDFGL---SRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASD 222
Query: 201 IWALGCVVLEMLS--GRQAWVVKEDCSIDQLFSIIGDEHSLP---EIPSRVSKEARDFLR 255
+W+ G V+ E++S R W D + + + I ++ LP + PS + + D +
Sbjct: 223 VWSYGIVMWEVMSYGERPYW----DMTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQ 278
Query: 256 RCFVRKPAF 264
+ +P F
Sbjct: 279 KDRNHRPKF 287
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 73/169 (43%), Gaps = 20/169 (11%)
Query: 83 MAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDN 142
M +L E+ G L + + N + R I G+ ++ + YVH D+ N
Sbjct: 88 MPVMILTEFMENGALDSFL-RLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHRDLAARN 146
Query: 143 ILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGT-----PL-YLAPETVVQHMQE 196
IL+ + V K++D G+ SR + DP+ + P+ + APE +
Sbjct: 147 ILV----NSNLVCKVSDFGL---SRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFT 199
Query: 197 APSDIWALGCVVLEMLS--GRQAWVVKEDCSIDQLFSIIGDEHSLPEIP 243
+ SD W+ G V+ E++S R W D S + + I ++ LP P
Sbjct: 200 SASDAWSYGIVMWEVMSFGERPYW----DMSNQDVINAIEQDYRLPPPP 244
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 90/212 (42%), Gaps = 40/212 (18%)
Query: 109 LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
L + D+R + IL+ + + H G +H DVKP N+L+ ++ D G+A+ +
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLIDHEHRK---LRLIDWGLAE--FY 182
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQH-MQEAPSDIWALGCVVLEMLSGRQA---------- 217
Q+++ + + + PE +V + M + D+W+LGC++ M+ ++
Sbjct: 183 HPGQEYNVRV-ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 241
Query: 218 ---------------WVVKEDCSIDQLFSIIGDEHSLP--------EIPSRVSKEARDFL 254
++ K + +D F+ I HS E VS EA DFL
Sbjct: 242 LVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFL 301
Query: 255 RRCFVRKPAFRFTAEMLLDDPFVKGVDEELSR 286
+ R TA ++ P+ V ++ +R
Sbjct: 302 DKLLRYDHQSRLTAREAMEHPYFYTVVKDQAR 333
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 87/206 (42%), Gaps = 23/206 (11%)
Query: 85 YNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNIL 144
YN ++ G +L DL + C+ K V ++ + ++H ++ DVKP+N L
Sbjct: 79 YNAMVLELLGPSLEDLFDLCD-RTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFL 137
Query: 145 L-VATQSGKFVAKIADLGVAKRSRHCKRQKFDP-----SMRGTPLYLAPETVVQHMQEAP 198
+ + V I D +AK + +K P S+ GT Y++ T + Q
Sbjct: 138 IGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRR 197
Query: 199 SDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDE----------HSLPEIPSRVSK 248
D+ ALG + + L G W + ++ + + IGD + PE+ + +
Sbjct: 198 DDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFPEMATYLR- 256
Query: 249 EARDFLRRC-FVRKPAFRFTAEMLLD 273
++RR F KP + + ++ D
Sbjct: 257 ----YVRRLDFFEKPDYDYLRKLFTD 278
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 23/200 (11%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ EY + G+L D ++ G L + I G+ ++ YVH D++ NIL+
Sbjct: 79 IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV- 137
Query: 147 ATQSGKFVAKIADLGVAK---RSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWA 203
V K+AD G+A+ + RQ ++ T APE + SD+W+
Sbjct: 138 ---GENLVCKVADFGLARLIEDNEXTARQGAKFPIKWT----APEAALYGRFTIKSDVWS 190
Query: 204 LGCVVLEMLS-GRQAW--VVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVR 260
G ++ E+ + GR + +V + +DQ + + +P P + D + +C+ +
Sbjct: 191 FGILLTELTTKGRVPYPGMVNREV-LDQ----VERGYRMP-CPPECPESLHDLMCQCWRK 244
Query: 261 KPAFRFTAEML---LDDPFV 277
+P R T E L L+D F
Sbjct: 245 EPEERPTFEYLQAFLEDYFT 264
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 12/157 (7%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ EY G+L + K +G + R I G+ ++ D YVH D+ NIL+
Sbjct: 86 IITEYMENGSLDAFLRKNDGR-FTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILV- 143
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPL-YLAPETVVQHMQEAPSDIWALG 205
+ V K++D G+++ + P+ + APE + + SD+W+ G
Sbjct: 144 ---NSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYG 200
Query: 206 CVVLEMLS--GRQAWVVKEDCSIDQLFSIIGDEHSLP 240
V+ E++S R W D S + I + + LP
Sbjct: 201 IVMWEVMSYGERPYW----DMSNQDVIKAIEEGYRLP 233
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 110/271 (40%), Gaps = 32/271 (11%)
Query: 12 RVIGQGSFGCVFIAK-----PKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPF 66
R +G+G+FG VF+A+ P+ + L + +E E+ NL
Sbjct: 19 RELGEGAFGKVFLAECYNLCPEQDK-ILVAVKTLKDASDNARKDFHREAELLTNLQH-EH 76
Query: 67 VLECFGEEITMGENGEMAYNLLLEYAAGGTLG--------DLIEKCNGN---GLPEKDVR 115
+++ +G + G+ M + EY G L D + GN L + +
Sbjct: 77 IVKFYGVCVE-GDPLIMVF----EYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQML 131
Query: 116 HFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFD 175
H + I G+ ++ +VH D+ N L+ + KI D G+++ +
Sbjct: 132 HIAQQIAAGMVYLASQHFVHRDLATRNCLV----GENLLVKIGDFGMSRDVYSTDYYRVG 187
Query: 176 PSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIG 234
++ PE+++ SD+W+LG V+ E+ + G+Q W S +++ I
Sbjct: 188 GHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWY---QLSNNEVIECIT 244
Query: 235 DEHSLPEIPSRVSKEARDFLRRCFVRKPAFR 265
L + P +E + + C+ R+P R
Sbjct: 245 QGRVL-QRPRTCPQEVYELMLGCWQREPHMR 274
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 23/200 (11%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
+++EY + G L D ++ G L + I G+ ++ YVH D++ NIL+
Sbjct: 89 IVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV- 147
Query: 147 ATQSGKFVAKIADLGVAK---RSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWA 203
V K+AD G+A+ + + RQ ++ T APE + SD+W+
Sbjct: 148 ---GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----APEAALYGRFTIKSDVWS 200
Query: 204 LGCVVLEMLS-GRQAW--VVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVR 260
G ++ E+ + GR + +V + +DQ + + +P P + D + +C+ +
Sbjct: 201 FGILLTELTTKGRVPYPGMVNREV-LDQ----VERGYRMP-CPPECPESLHDLMCQCWRK 254
Query: 261 KPAFRFTAEML---LDDPFV 277
P R T E L L+D F
Sbjct: 255 DPEERPTFEYLQAFLEDYFT 274
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 23/200 (11%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ EY + G+L D ++ G L + I G+ ++ YVH D++ NIL+
Sbjct: 78 IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV- 136
Query: 147 ATQSGKFVAKIADLGVAK---RSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWA 203
V K+AD G+A+ + + RQ ++ T APE + SD+W+
Sbjct: 137 ---GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----APEAALYGRFTIKSDVWS 189
Query: 204 LGCVVLEMLS-GRQAW--VVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVR 260
G ++ E+ + GR + +V + +DQ + + +P P + D + +C+ +
Sbjct: 190 FGILLTELTTKGRVPYPGMVNREV-LDQ----VERGYRMP-CPPECPESLHDLMCQCWRK 243
Query: 261 KPAFRFTAEML---LDDPFV 277
P R T E L L+D F
Sbjct: 244 DPEERPTFEYLQAFLEDYFT 263
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 59/128 (46%), Gaps = 6/128 (4%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ EY G+L + K + + R I G+ ++ D GYVH D+ NIL+
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI- 180
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPL-YLAPETVVQHMQEAPSDIWALG 205
+ V K++D G+++ + P+ + +PE + + SD+W+ G
Sbjct: 181 ---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 237
Query: 206 CVVLEMLS 213
V+ E++S
Sbjct: 238 IVLWEVMS 245
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 23/200 (11%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ EY + G+L D ++ G L + I G+ ++ YVH D++ NIL+
Sbjct: 80 IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV- 138
Query: 147 ATQSGKFVAKIADLGVAK---RSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWA 203
V K+AD G+A+ + + RQ ++ T APE + SD+W+
Sbjct: 139 ---GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----APEAALYGRFTIKSDVWS 191
Query: 204 LGCVVLEMLS-GRQAW--VVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVR 260
G ++ E+ + GR + +V + +DQ + + +P P + D + +C+ +
Sbjct: 192 FGILLTELTTKGRVPYPGMVNREV-LDQ----VERGYRMP-CPPECPESLHDLMCQCWRK 245
Query: 261 KPAFRFTAEML---LDDPFV 277
P R T E L L+D F
Sbjct: 246 DPEERPTFEYLQAFLEDYFT 265
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 59/128 (46%), Gaps = 6/128 (4%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ EY G+L + K + + R I G+ ++ D GYVH D+ NIL+
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI- 180
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPL-YLAPETVVQHMQEAPSDIWALG 205
+ V K++D G+++ + P+ + +PE + + SD+W+ G
Sbjct: 181 ---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 237
Query: 206 CVVLEMLS 213
V+ E++S
Sbjct: 238 IVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 59/128 (46%), Gaps = 6/128 (4%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ EY G+L + K + + R I G+ ++ D GYVH D+ NIL+
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI- 180
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPL-YLAPETVVQHMQEAPSDIWALG 205
+ V K++D G+++ + P+ + +PE + + SD+W+ G
Sbjct: 181 ---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 237
Query: 206 CVVLEMLS 213
V+ E++S
Sbjct: 238 IVLWEVMS 245
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 20/140 (14%)
Query: 121 ILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG 180
+L GI H+H +G +H D+KP NI++ KI D G+A+ + S
Sbjct: 173 MLCGIKHLHSAGIIHRDLKPSNIVV----KSDCTLKILDFGLARTA--------GTSFMM 220
Query: 181 TP-----LYLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGD 235
TP Y APE ++ + DIW++GC++ EM+ + + ++ IDQ +I
Sbjct: 221 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD--YIDQWNKVIEQ 278
Query: 236 EHS-LPEIPSRVSKEARDFL 254
+ PE ++ R+++
Sbjct: 279 LGTPCPEFMKKLQPTVRNYV 298
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 23/200 (11%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ EY + G+L D ++ G L + I G+ ++ YVH D++ NIL+
Sbjct: 89 IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV- 147
Query: 147 ATQSGKFVAKIADLGVAK---RSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWA 203
V K+AD G+A+ + + RQ ++ T APE + SD+W+
Sbjct: 148 ---GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----APEAALYGRFTIKSDVWS 200
Query: 204 LGCVVLEMLS-GRQAW--VVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVR 260
G ++ E+ + GR + +V + +DQ + + +P P + D + +C+ +
Sbjct: 201 FGILLTELTTKGRVPYPGMVNREV-LDQ----VERGYRMP-CPPECPESLHDLMCQCWRK 254
Query: 261 KPAFRFTAEML---LDDPFV 277
P R T E L L+D F
Sbjct: 255 DPEERPTFEYLQAFLEDYFT 274
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 67/134 (50%), Gaps = 7/134 (5%)
Query: 84 AYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNI 143
++ L++E A G L +++ + +K++ + G+ ++ +S +VH D+ N+
Sbjct: 443 SWMLVMEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNV 500
Query: 144 LLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPL-YLAPETVVQHMQEAPSDIW 202
LLV + AKI+D G++K R + + P+ + APE + + + SD+W
Sbjct: 501 LLVT----QHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 556
Query: 203 ALGCVVLEMLSGRQ 216
+ G ++ E S Q
Sbjct: 557 SFGVLMWEAFSYGQ 570
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 69/136 (50%), Gaps = 11/136 (8%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ + A G+ DLI +G+ E + + + +L+ + +IH GYVH VK +IL+
Sbjct: 103 VVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILIS 162
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKF-----DPSMRGTPLYLAPETVVQHMQ--EAPS 199
++L + H +RQ+ S++ P +L+PE + Q++Q +A S
Sbjct: 163 VDGKVYLSGLRSNLSMIS---HGQRQRVVHDFPKYSVKVLP-WLSPEVLQQNLQGYDAKS 218
Query: 200 DIWALGCVVLEMLSGR 215
DI+++G E+ +G
Sbjct: 219 DIYSVGITACELANGH 234
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 23/200 (11%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ EY + G+L D ++ G L + I G+ ++ YVH D++ NIL+
Sbjct: 89 IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV- 147
Query: 147 ATQSGKFVAKIADLGVAK---RSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWA 203
V K+AD G+A+ + + RQ ++ T APE + SD+W+
Sbjct: 148 ---GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----APEAALYGRFTIKSDVWS 200
Query: 204 LGCVVLEMLS-GRQAW--VVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVR 260
G ++ E+ + GR + +V + +DQ + + +P P + D + +C+ +
Sbjct: 201 FGILLTELTTKGRVPYPGMVNREV-LDQ----VERGYRMP-CPPECPESLHDLMCQCWRK 254
Query: 261 KPAFRFTAEML---LDDPFV 277
P R T E L L+D F
Sbjct: 255 DPEERPTFEYLQAFLEDYFT 274
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 23/200 (11%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ EY G+L D ++ G L + + I G+ ++ YVH D++ NIL+
Sbjct: 86 IVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILV- 144
Query: 147 ATQSGKFVAKIADLGVAK---RSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWA 203
V K+AD G+A+ + RQ ++ T APE + SD+W+
Sbjct: 145 ---GENLVCKVADFGLARLIEDNEWTARQGAKFPIKWT----APEAALYGRFTIKSDVWS 197
Query: 204 LGCVVLEMLS-GRQAW--VVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVR 260
G ++ E+ + GR + +V + +DQ + + +P P + D + +C+ +
Sbjct: 198 FGILLTELTTKGRVPYPGMVNREV-LDQ----VERGYRMP-CPPECPESLHDLMCQCWRK 251
Query: 261 KPAFRFTAEML---LDDPFV 277
+P R T E L L+D F
Sbjct: 252 EPEERPTFEYLQAFLEDYFT 271
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 59/128 (46%), Gaps = 6/128 (4%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ EY G+L + K + + R I G+ ++ D GYVH D+ NIL+
Sbjct: 121 IVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI- 178
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPL-YLAPETVVQHMQEAPSDIWALG 205
+ V K++D G+++ + P+ + +PE + + SD+W+ G
Sbjct: 179 ---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 235
Query: 206 CVVLEMLS 213
V+ E++S
Sbjct: 236 IVLWEVMS 243
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 59/128 (46%), Gaps = 6/128 (4%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ EY G+L + K + + R I G+ ++ D GYVH D+ NIL+
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI- 180
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPL-YLAPETVVQHMQEAPSDIWALG 205
+ V K++D G+++ + P+ + +PE + + SD+W+ G
Sbjct: 181 ---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 237
Query: 206 CVVLEMLS 213
V+ E++S
Sbjct: 238 IVLWEVMS 245
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 17/100 (17%)
Query: 121 ILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG 180
+L GI H+H +G +H D+KP NI++ KI D G+A+ + S
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVV----KSDCTLKILDFGLARTA--------GTSFMM 182
Query: 181 TP-----LYLAPETVVQHMQEAPSDIWALGCVVLEMLSGR 215
TP Y APE ++ + DIW++GC++ EM+ +
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 17/100 (17%)
Query: 121 ILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG 180
+L GI H+H +G +H D+KP NI++ KI D G+A+ + S
Sbjct: 134 MLCGIKHLHSAGIIHRDLKPSNIVV----KSDCTLKILDFGLARTA--------GTSFMM 181
Query: 181 TP-----LYLAPETVVQHMQEAPSDIWALGCVVLEMLSGR 215
TP Y APE ++ + DIW++GC++ EM+ +
Sbjct: 182 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 221
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 120/284 (42%), Gaps = 44/284 (15%)
Query: 11 GRVIGQGSFGCV-----FIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCP 65
G+ +G+G FG V F K ++ + + M L E V +N P
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN-HP 86
Query: 66 FVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNG----------------- 108
V++ +G ++G + L++EYA G+L + + G
Sbjct: 87 HVIKLYG---ACSQDGPLL--LIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH 141
Query: 109 -----LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVA 163
L D+ F I +G+ ++ + VH D+ NIL+ + KI+D G++
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRK----MKISDFGLS 197
Query: 164 KRSRHCKRQKFDPSMRGTPL-YLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVK 221
R + + S P+ ++A E++ H+ SD+W+ G ++ E+++ G +
Sbjct: 198 -RDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY--- 253
Query: 222 EDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFR 265
++LF+++ H + E P S+E + +C+ ++P R
Sbjct: 254 PGIPPERLFNLLKTGHRM-ERPDNCSEEMYRLMLQCWKQEPDKR 296
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 17/100 (17%)
Query: 121 ILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG 180
+L GI H+H +G +H D+KP NI++ KI D G+A+ + S
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVV----KSDCTLKILDFGLARTA--------GTSFMM 182
Query: 181 TP-----LYLAPETVVQHMQEAPSDIWALGCVVLEMLSGR 215
TP Y APE ++ + DIW++GC++ EM+ +
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 90/212 (42%), Gaps = 40/212 (18%)
Query: 109 LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
L + D+R + IL+ + + H G +H DVKP N+++ ++ D G+A+ +
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK---LRLIDWGLAE--FY 182
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQH-MQEAPSDIWALGCVVLEMLSGRQA---------- 217
Q+++ + + + PE +V + M + D+W+LGC++ M+ ++
Sbjct: 183 HPGQEYNVRV-ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 241
Query: 218 ---------------WVVKEDCSIDQLFSIIGDEHSLP--------EIPSRVSKEARDFL 254
++ K + +D F+ I HS E VS EA DFL
Sbjct: 242 LVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFL 301
Query: 255 RRCFVRKPAFRFTAEMLLDDPFVKGVDEELSR 286
+ R TA ++ P+ V +E S+
Sbjct: 302 DKLLRYDHQSRLTAREAMEHPYFYPVVKEQSQ 333
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 69/136 (50%), Gaps = 11/136 (8%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ + A G+ DLI +G+ E + + + +L+ + +IH GYVH VK +IL+
Sbjct: 87 VVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILIS 146
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKF-----DPSMRGTPLYLAPETVVQHMQ--EAPS 199
++L + H +RQ+ S++ P +L+PE + Q++Q +A S
Sbjct: 147 VDGKVYLSGLRSNLSMIS---HGQRQRVVHDFPKYSVKVLP-WLSPEVLQQNLQGYDAKS 202
Query: 200 DIWALGCVVLEMLSGR 215
DI+++G E+ +G
Sbjct: 203 DIYSVGITACELANGH 218
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 121 ILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG 180
+L GI H+H +G +H D+KP NI++ KI D G+A+ + +P +
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVV----KSDCTLKILDFGLARTA--GTSFMMEPEV-V 187
Query: 181 TPLYLAPETVVQHMQEAPSDIWALGCVVLEML 212
T Y APE ++ + DIW++GC++ EM+
Sbjct: 188 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 17/100 (17%)
Query: 121 ILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG 180
+L GI H+H +G +H D+KP NI++ KI D G+A+ + S
Sbjct: 136 MLCGIKHLHSAGIIHRDLKPSNIVV----KSDCTLKILDFGLARTA--------GTSFMM 183
Query: 181 TP-----LYLAPETVVQHMQEAPSDIWALGCVVLEMLSGR 215
TP Y APE ++ + DIW++GC++ EM+ +
Sbjct: 184 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 17/100 (17%)
Query: 121 ILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG 180
+L GI H+H +G +H D+KP NI++ KI D G+A+ + S
Sbjct: 136 MLCGIKHLHSAGIIHRDLKPSNIVV----KSDCTLKILDFGLARTA--------GTSFMM 183
Query: 181 TP-----LYLAPETVVQHMQEAPSDIWALGCVVLEMLSGR 215
TP Y APE ++ + DIW++GC++ EM+ +
Sbjct: 184 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 58/128 (45%), Gaps = 6/128 (4%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ EY G+L + K + + R I G+ ++ D GYVH D+ NIL+
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI- 180
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPL-YLAPETVVQHMQEAPSDIWALG 205
+ V K++D G+ + + P+ + +PE + + SD+W+ G
Sbjct: 181 ---NSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 237
Query: 206 CVVLEMLS 213
V+ E++S
Sbjct: 238 IVLWEVMS 245
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 17/100 (17%)
Query: 121 ILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG 180
+L GI H+H +G +H D+KP NI++ KI D G+A+ + S
Sbjct: 128 MLCGIKHLHSAGIIHRDLKPSNIVV----KSDCTLKILDFGLARTA--------GTSFMM 175
Query: 181 TP-----LYLAPETVVQHMQEAPSDIWALGCVVLEMLSGR 215
TP Y APE ++ + DIW++GC++ EM+ +
Sbjct: 176 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 17/100 (17%)
Query: 121 ILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG 180
+L GI H+H +G +H D+KP NI++ KI D G+A+ + S
Sbjct: 129 MLCGIKHLHSAGIIHRDLKPSNIVV----KSDCTLKILDFGLARTA--------GTSFMM 176
Query: 181 TP-----LYLAPETVVQHMQEAPSDIWALGCVVLEMLSGR 215
TP Y APE ++ + DIW++GC++ EM+ +
Sbjct: 177 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 90/212 (42%), Gaps = 40/212 (18%)
Query: 109 LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
L + D+R + IL+ + + H G +H DVKP N+++ ++ D G+A+ +
Sbjct: 133 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK---LRLIDWGLAE--FY 187
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQH-MQEAPSDIWALGCVVLEMLSGRQA---------- 217
Q+++ + + + PE +V + M + D+W+LGC++ M+ ++
Sbjct: 188 HPGQEYNVRV-ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 246
Query: 218 ---------------WVVKEDCSIDQLFSIIGDEHSLP--------EIPSRVSKEARDFL 254
++ K + +D F+ I HS E VS EA DFL
Sbjct: 247 LVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFL 306
Query: 255 RRCFVRKPAFRFTAEMLLDDPFVKGVDEELSR 286
+ R TA ++ P+ V ++ +R
Sbjct: 307 DKLLRYDHQSRLTAREAMEHPYFYTVVKDQAR 338
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 17/100 (17%)
Query: 121 ILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG 180
+L GI H+H +G +H D+KP NI++ KI D G+A+ + S
Sbjct: 129 MLCGIKHLHSAGIIHRDLKPSNIVV----KSDCTLKILDFGLARTA--------GTSFMM 176
Query: 181 TP-----LYLAPETVVQHMQEAPSDIWALGCVVLEMLSGR 215
TP Y APE ++ + DIW++GC++ EM+ +
Sbjct: 177 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 82/193 (42%), Gaps = 11/193 (5%)
Query: 87 LLLEYAAGGTLGDLIEKC-----NGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPD 141
+LLE AGG L + + + L D+ H R I G ++ ++ ++H D+
Sbjct: 125 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 184
Query: 142 NILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDI 201
N LL G+ VAKI D G+A+ + ++ PE ++ + + +D
Sbjct: 185 NCLLTCPGPGR-VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT 243
Query: 202 WALGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVR 260
W+ G ++ E+ S G + K + + + + G P V + + +C+
Sbjct: 244 WSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR----IMTQCWQH 299
Query: 261 KPAFRFTAEMLLD 273
+P R ++L+
Sbjct: 300 QPEDRPNFAIILE 312
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 23/200 (11%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
+++EY + G+L D ++ G L + I G+ ++ YVH D++ NIL+
Sbjct: 89 IVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV- 147
Query: 147 ATQSGKFVAKIADLGVAK---RSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWA 203
V K+AD G+A+ + RQ ++ T APE + SD+W+
Sbjct: 148 ---GENLVCKVADFGLARLIEDNEXTARQGAKFPIKWT----APEAALYGRFTIKSDVWS 200
Query: 204 LGCVVLEMLS-GRQAW--VVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVR 260
G ++ E+ + GR + +V + +DQ + + +P P + D + +C+ +
Sbjct: 201 FGILLTELTTKGRVPYPGMVNREV-LDQ----VERGYRMP-CPPECPESLHDLMCQCWRK 254
Query: 261 KPAFRFTAEML---LDDPFV 277
P R T E L L+D F
Sbjct: 255 DPEERPTFEYLQAFLEDYFT 274
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 82/193 (42%), Gaps = 11/193 (5%)
Query: 87 LLLEYAAGGTLGDLIEKC-----NGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPD 141
+LLE AGG L + + + L D+ H R I G ++ ++ ++H D+
Sbjct: 102 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 161
Query: 142 NILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDI 201
N LL G+ VAKI D G+A+ + ++ PE ++ + + +D
Sbjct: 162 NCLLTCPGPGR-VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT 220
Query: 202 WALGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVR 260
W+ G ++ E+ S G + K + + + + G P V + + +C+
Sbjct: 221 WSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR----IMTQCWQH 276
Query: 261 KPAFRFTAEMLLD 273
+P R ++L+
Sbjct: 277 QPEDRPNFAIILE 289
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 23/200 (11%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ EY + G+L D ++ G L + I G+ ++ YVH D++ NIL+
Sbjct: 89 IVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV- 147
Query: 147 ATQSGKFVAKIADLGVAK---RSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWA 203
V K+AD G+A+ + + RQ ++ T APE + SD+W+
Sbjct: 148 ---GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----APEAALYGRFTIKSDVWS 200
Query: 204 LGCVVLEMLS-GRQAW--VVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVR 260
G ++ E+ + GR + +V + +DQ + + +P P + D + +C+ +
Sbjct: 201 FGILLTELTTKGRVPYPGMVNREV-LDQ----VERGYRMP-CPPECPESLHDLMCQCWRK 254
Query: 261 KPAFRFTAEML---LDDPFV 277
P R T E L L+D F
Sbjct: 255 DPEERPTFEYLQAFLEDYFT 274
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 67/134 (50%), Gaps = 7/134 (5%)
Query: 84 AYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNI 143
++ L++E A G L +++ + +K++ + G+ ++ +S +VH D+ N+
Sbjct: 444 SWMLVMEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNV 501
Query: 144 LLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPL-YLAPETVVQHMQEAPSDIW 202
LLV + AKI+D G++K R + + P+ + APE + + + SD+W
Sbjct: 502 LLVT----QHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 557
Query: 203 ALGCVVLEMLSGRQ 216
+ G ++ E S Q
Sbjct: 558 SFGVLMWEAFSYGQ 571
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 90/212 (42%), Gaps = 40/212 (18%)
Query: 109 LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
L + D+R + IL+ + + H G +H DVKP N+++ ++ D G+A+ +
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK---LRLIDWGLAE--FY 182
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQH-MQEAPSDIWALGCVVLEMLSGRQA---------- 217
Q+++ + + + PE +V + M + D+W+LGC++ M+ ++
Sbjct: 183 HPGQEYNVRV-ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 241
Query: 218 ---------------WVVKEDCSIDQLFSIIGDEHSLP--------EIPSRVSKEARDFL 254
++ K + +D F+ I HS E VS EA DFL
Sbjct: 242 LVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFL 301
Query: 255 RRCFVRKPAFRFTAEMLLDDPFVKGVDEELSR 286
+ R TA ++ P+ V ++ +R
Sbjct: 302 DKLLRYDHQSRLTAREAMEHPYFYTVVKDQAR 333
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 82/193 (42%), Gaps = 11/193 (5%)
Query: 87 LLLEYAAGGTLGDLIEKC-----NGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPD 141
+LLE AGG L + + + L D+ H R I G ++ ++ ++H D+
Sbjct: 125 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 184
Query: 142 NILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDI 201
N LL G+ VAKI D G+A+ + ++ PE ++ + + +D
Sbjct: 185 NCLLTCPGPGR-VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT 243
Query: 202 WALGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVR 260
W+ G ++ E+ S G + K + + + + G P V + + +C+
Sbjct: 244 WSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR----IMTQCWQH 299
Query: 261 KPAFRFTAEMLLD 273
+P R ++L+
Sbjct: 300 QPEDRPNFAIILE 312
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 121/287 (42%), Gaps = 50/287 (17%)
Query: 11 GRVIGQGSFGCV-----FIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCP 65
G+ +G+G FG V F K ++ + + M L E V +N P
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN-HP 86
Query: 66 FVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNG----------------- 108
V++ +G ++G + L++EYA G+L + + G
Sbjct: 87 HVIKLYG---ACSQDGPLL--LIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH 141
Query: 109 -----LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVA 163
L D+ F I +G+ ++ + VH D+ NIL+ + KI+D G++
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRK----MKISDFGLS 197
Query: 164 K----RSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAW 218
+ + KR + ++ ++A E++ H+ SD+W+ G ++ E+++ G +
Sbjct: 198 RDVYEEDSYVKRSQGRIPVK----WMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY 253
Query: 219 VVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFR 265
++LF+++ H + E P S+E + +C+ ++P R
Sbjct: 254 ---PGIPPERLFNLLKTGHRM-ERPDNCSEEMYRLMLQCWKQEPDKR 296
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 90/212 (42%), Gaps = 40/212 (18%)
Query: 109 LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
L + D+R + IL+ + + H G +H DVKP N+++ ++ D G+A+ +
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK---LRLIDWGLAE--FY 182
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQH-MQEAPSDIWALGCVVLEMLSGRQA---------- 217
Q+++ + + + PE +V + M + D+W+LGC++ M+ ++
Sbjct: 183 HPGQEYNVRV-ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 241
Query: 218 ---------------WVVKEDCSIDQLFSIIGDEHSLP--------EIPSRVSKEARDFL 254
++ K + +D F+ I HS E VS EA DFL
Sbjct: 242 LVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFL 301
Query: 255 RRCFVRKPAFRFTAEMLLDDPFVKGVDEELSR 286
+ R TA ++ P+ V ++ +R
Sbjct: 302 DKLLRYDHQSRLTAREAMEHPYFYTVVKDQAR 333
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 90/212 (42%), Gaps = 40/212 (18%)
Query: 109 LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
L + D+R + IL+ + + H G +H DVKP N+++ ++ D G+A+ +
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK---LRLIDWGLAE--FY 182
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQH-MQEAPSDIWALGCVVLEMLSGRQA---------- 217
Q+++ + + + PE +V + M + D+W+LGC++ M+ ++
Sbjct: 183 HPGQEYNVRV-ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 241
Query: 218 ---------------WVVKEDCSIDQLFSIIGDEHSLP--------EIPSRVSKEARDFL 254
++ K + +D F+ I HS E VS EA DFL
Sbjct: 242 LVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFL 301
Query: 255 RRCFVRKPAFRFTAEMLLDDPFVKGVDEELSR 286
+ R TA ++ P+ V ++ +R
Sbjct: 302 DKLLRYDHQSRLTAREAMEHPYFYTVVKDQAR 333
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 82/193 (42%), Gaps = 11/193 (5%)
Query: 87 LLLEYAAGGTLGDLIEKC-----NGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPD 141
+LLE AGG L + + + L D+ H R I G ++ ++ ++H D+
Sbjct: 110 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 169
Query: 142 NILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDI 201
N LL G+ VAKI D G+A+ + ++ PE ++ + + +D
Sbjct: 170 NCLLTCPGPGR-VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT 228
Query: 202 WALGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVR 260
W+ G ++ E+ S G + K + + + + G P V + + +C+
Sbjct: 229 WSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR----IMTQCWQH 284
Query: 261 KPAFRFTAEMLLD 273
+P R ++L+
Sbjct: 285 QPEDRPNFAIILE 297
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 82/193 (42%), Gaps = 11/193 (5%)
Query: 87 LLLEYAAGGTLGDLIEKC-----NGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPD 141
+LLE AGG L + + + L D+ H R I G ++ ++ ++H D+
Sbjct: 111 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 170
Query: 142 NILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDI 201
N LL G+ VAKI D G+A+ + ++ PE ++ + + +D
Sbjct: 171 NCLLTCPGPGR-VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT 229
Query: 202 WALGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVR 260
W+ G ++ E+ S G + K + + + + G P V + + +C+
Sbjct: 230 WSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR----IMTQCWQH 285
Query: 261 KPAFRFTAEMLLD 273
+P R ++L+
Sbjct: 286 QPEDRPNFAIILE 298
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 90/212 (42%), Gaps = 40/212 (18%)
Query: 109 LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
L + D+R + IL+ + + H G +H DVKP N+++ ++ D G+A+ +
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK---LRLIDWGLAE--FY 182
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQH-MQEAPSDIWALGCVVLEMLSGRQA---------- 217
Q+++ + + + PE +V + M + D+W+LGC++ M+ ++
Sbjct: 183 HPGQEYNVRV-ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 241
Query: 218 ---------------WVVKEDCSIDQLFSIIGDEHSLP--------EIPSRVSKEARDFL 254
++ K + +D F+ I HS E VS EA DFL
Sbjct: 242 LVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFL 301
Query: 255 RRCFVRKPAFRFTAEMLLDDPFVKGVDEELSR 286
+ R TA ++ P+ V ++ +R
Sbjct: 302 DKLLRYDHQSRLTAREAMEHPYFYTVVKDQAR 333
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 90/212 (42%), Gaps = 40/212 (18%)
Query: 109 LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
L + D+R + IL+ + + H G +H DVKP N+++ ++ D G+A+ +
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK---LRLIDWGLAE--FY 182
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQH-MQEAPSDIWALGCVVLEMLSGRQA---------- 217
Q+++ + + + PE +V + M + D+W+LGC++ M+ ++
Sbjct: 183 HPGQEYNVRV-ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 241
Query: 218 ---------------WVVKEDCSIDQLFSIIGDEHSLP--------EIPSRVSKEARDFL 254
++ K + +D F+ I HS E VS EA DFL
Sbjct: 242 LVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFL 301
Query: 255 RRCFVRKPAFRFTAEMLLDDPFVKGVDEELSR 286
+ R TA ++ P+ V ++ +R
Sbjct: 302 DKLLRYDHQSRLTAREAMEHPYFYTVVKDQAR 333
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 120/284 (42%), Gaps = 44/284 (15%)
Query: 11 GRVIGQGSFGCV-----FIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCP 65
G+ +G+G FG V F K ++ + + M L E V +N P
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN-HP 86
Query: 66 FVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNG----------------- 108
V++ +G ++G + L++EYA G+L + + G
Sbjct: 87 HVIKLYG---ACSQDGPLL--LIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH 141
Query: 109 -----LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVA 163
L D+ F I +G+ ++ + VH D+ NIL+ + KI+D G++
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRK----MKISDFGLS 197
Query: 164 KRSRHCKRQKFDPSMRGTPL-YLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVK 221
R + + S P+ ++A E++ H+ SD+W+ G ++ E+++ G +
Sbjct: 198 -RDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY--- 253
Query: 222 EDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFR 265
++LF+++ H + E P S+E + +C+ ++P R
Sbjct: 254 PGIPPERLFNLLKTGHRM-ERPDNCSEEMYRLMLQCWKQEPDKR 296
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 82/193 (42%), Gaps = 11/193 (5%)
Query: 87 LLLEYAAGGTLGDLIEKC-----NGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPD 141
+LLE AGG L + + + L D+ H R I G ++ ++ ++H D+
Sbjct: 117 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 176
Query: 142 NILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDI 201
N LL G+ VAKI D G+A+ + ++ PE ++ + + +D
Sbjct: 177 NCLLTCPGPGR-VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT 235
Query: 202 WALGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVR 260
W+ G ++ E+ S G + K + + + + G P V + + +C+
Sbjct: 236 WSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR----IMTQCWQH 291
Query: 261 KPAFRFTAEMLLD 273
+P R ++L+
Sbjct: 292 QPEDRPNFAIILE 304
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 90/212 (42%), Gaps = 40/212 (18%)
Query: 109 LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
L + D+R + IL+ + + H G +H DVKP N+++ ++ D G+A+ +
Sbjct: 127 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK---LRLIDWGLAE--FY 181
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQH-MQEAPSDIWALGCVVLEMLSGRQA---------- 217
Q+++ + + + PE +V + M + D+W+LGC++ M+ ++
Sbjct: 182 HPGQEYNVRV-ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 240
Query: 218 ---------------WVVKEDCSIDQLFSIIGDEHSLP--------EIPSRVSKEARDFL 254
++ K + +D F+ I HS E VS EA DFL
Sbjct: 241 LVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFL 300
Query: 255 RRCFVRKPAFRFTAEMLLDDPFVKGVDEELSR 286
+ R TA ++ P+ V ++ +R
Sbjct: 301 DKLLRYDHQSRLTAREAMEHPYFYTVVKDQAR 332
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 90/212 (42%), Gaps = 40/212 (18%)
Query: 109 LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
L + D+R + IL+ + + H G +H DVKP N+++ ++ D G+A+ +
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK---LRLIDWGLAE--FY 182
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQH-MQEAPSDIWALGCVVLEMLSGRQA---------- 217
Q+++ + + + PE +V + M + D+W+LGC++ M+ ++
Sbjct: 183 HPGQEYNVRV-ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 241
Query: 218 ---------------WVVKEDCSIDQLFSIIGDEHSLP--------EIPSRVSKEARDFL 254
++ K + +D F+ I HS E VS EA DFL
Sbjct: 242 LVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFL 301
Query: 255 RRCFVRKPAFRFTAEMLLDDPFVKGVDEELSR 286
+ R TA ++ P+ V ++ +R
Sbjct: 302 DKLLRYDHQSRLTAREAMEHPYFYTVVKDQAR 333
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 82/193 (42%), Gaps = 11/193 (5%)
Query: 87 LLLEYAAGGTLGDLIEKC-----NGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPD 141
+LLE AGG L + + + L D+ H R I G ++ ++ ++H D+
Sbjct: 127 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 186
Query: 142 NILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDI 201
N LL G+ VAKI D G+A+ + ++ PE ++ + + +D
Sbjct: 187 NCLLTCPGPGR-VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT 245
Query: 202 WALGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVR 260
W+ G ++ E+ S G + K + + + + G P V + + +C+
Sbjct: 246 WSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR----IMTQCWQH 301
Query: 261 KPAFRFTAEMLLD 273
+P R ++L+
Sbjct: 302 QPEDRPNFAIILE 314
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 90/212 (42%), Gaps = 40/212 (18%)
Query: 109 LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
L + D+R + IL+ + + H G +H DVKP N+++ ++ D G+A+ +
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK---LRLIDWGLAE--FY 182
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQH-MQEAPSDIWALGCVVLEMLSGRQA---------- 217
Q+++ + + + PE +V + M + D+W+LGC++ M+ ++
Sbjct: 183 HPGQEYNVRV-ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 241
Query: 218 ---------------WVVKEDCSIDQLFSIIGDEHSLP--------EIPSRVSKEARDFL 254
++ K + +D F+ I HS E VS EA DFL
Sbjct: 242 LVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFL 301
Query: 255 RRCFVRKPAFRFTAEMLLDDPFVKGVDEELSR 286
+ R TA ++ P+ V ++ +R
Sbjct: 302 DKLLRYDHQSRLTAREAMEHPYFYTVVKDQAR 333
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 73/169 (43%), Gaps = 20/169 (11%)
Query: 83 MAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDN 142
M +L E+ G L + + N + R I G+ ++ + YVH D+ N
Sbjct: 90 MPVMILTEFMENGALDSFL-RLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHRDLAARN 148
Query: 143 ILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGT-----PL-YLAPETVVQHMQE 196
IL+ + V K++D G+ SR + DP+ + P+ + APE +
Sbjct: 149 ILV----NSNLVCKVSDFGL---SRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFT 201
Query: 197 APSDIWALGCVVLEMLS--GRQAWVVKEDCSIDQLFSIIGDEHSLPEIP 243
+ SD W+ G V+ E++S R W D S + + I ++ LP P
Sbjct: 202 SASDAWSYGIVMWEVMSFGERPYW----DMSNQDVINAIEQDYRLPPPP 246
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 76/166 (45%), Gaps = 17/166 (10%)
Query: 96 TLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIH--DSGYVHCDVKPDNILLVATQSGKF 153
L DL+ N G+ R F + + + + + +HCD+KP+NILL + +
Sbjct: 141 NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPK--RX 198
Query: 154 VAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS 213
KI D G + C+ + + Y +PE ++ + D+W+LGC+++EM +
Sbjct: 199 AIKIVDFGSS-----CQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHT 253
Query: 214 GRQAWV-VKEDCSIDQLFSIIG--DEHSLPEIPSRVSKEARDFLRR 256
G + E ++++ ++G H L + P +AR F +
Sbjct: 254 GEPLFSGANEVDQMNKIVEVLGIPPAHILDQAP-----KARKFFEK 294
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 91/410 (22%), Positives = 154/410 (37%), Gaps = 122/410 (29%)
Query: 7 SWFRGRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPF 66
++ +IG+GS+G V++A K+ ++K +F++L C
Sbjct: 27 NYIIKHLIGRGSYGYVYLAYDKNTEK---------------NVAIKKVNRMFEDLIDCKR 71
Query: 67 VLECFGEEITMGENGEMAYNLLL-------EYAAGGTLGDLIEKCNGN---------GLP 110
+L EIT+ + Y + L + L ++E + + L
Sbjct: 72 ILR----EITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLT 127
Query: 111 EKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAK------ 164
E+ ++ +L G IH+SG +H D+KP N LL S K+ D G+A+
Sbjct: 128 EEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCS----VKVCDFGLARTINSEK 183
Query: 165 ----------------RSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCV 207
+++ K+Q S T Y APE ++ S DIW+ GC+
Sbjct: 184 DTNIVNDLEENEEPGPHNKNLKKQL--TSHVVTRWYRAPELILLQENYTKSIDIWSTGCI 241
Query: 208 VLEMLSGRQAWV--------------------------VKEDCSIDQL---FSIIG--DE 236
E+L+ Q+ + V E + DQL F+IIG E
Sbjct: 242 FAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTE 301
Query: 237 HSL-----PEI-------PSR-----------VSKEARDFLRRCFVRKPAFRFTAEMLLD 273
L PE+ P R +S + + L P R T + LD
Sbjct: 302 DDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALD 361
Query: 274 DPFVKGVDEELSRELEGDYSQGEVTLSNADAESCSPECISFIPLEANSSL 323
P++K V + ++LE ++S ++ L D S + +I L+ S
Sbjct: 362 HPYLKDVRK---KKLE-NFSTKKIILPFDDWMVLSETQLRYIFLKEVQSF 407
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 60/130 (46%), Gaps = 11/130 (8%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ EY G+L D ++ G L ++ + G+ +I Y+H D++ NIL+
Sbjct: 80 IVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILV- 138
Query: 147 ATQSGKFVAKIADLGVAK---RSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWA 203
+ KIAD G+A+ + RQ ++ T APE + SD+W+
Sbjct: 139 ---GNGLICKIADFGLARLIEDNEXTARQGAKFPIKWT----APEAALYGRFTIKSDVWS 191
Query: 204 LGCVVLEMLS 213
G ++ E+++
Sbjct: 192 FGILLTELVT 201
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 82/193 (42%), Gaps = 11/193 (5%)
Query: 87 LLLEYAAGGTLGDLIEKC-----NGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPD 141
+LLE AGG L + + + L D+ H R I G ++ ++ ++H D+
Sbjct: 111 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 170
Query: 142 NILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDI 201
N LL G+ VAKI D G+A+ + ++ PE ++ + + +D
Sbjct: 171 NCLLTCPGPGR-VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT 229
Query: 202 WALGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVR 260
W+ G ++ E+ S G + K + + + + G P V + + +C+
Sbjct: 230 WSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR----IMTQCWQH 285
Query: 261 KPAFRFTAEMLLD 273
+P R ++L+
Sbjct: 286 QPEDRPNFAIILE 298
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 82/193 (42%), Gaps = 11/193 (5%)
Query: 87 LLLEYAAGGTLGDLIEKC-----NGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPD 141
+LLE AGG L + + + L D+ H R I G ++ ++ ++H D+
Sbjct: 151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 210
Query: 142 NILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDI 201
N LL G+ VAKI D G+A+ + ++ PE ++ + + +D
Sbjct: 211 NCLLTCPGPGR-VAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT 269
Query: 202 WALGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVR 260
W+ G ++ E+ S G + K + + + + G P V + + +C+
Sbjct: 270 WSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR----IMTQCWQH 325
Query: 261 KPAFRFTAEMLLD 273
+P R ++L+
Sbjct: 326 QPEDRPNFAIILE 338
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 103/234 (44%), Gaps = 19/234 (8%)
Query: 14 IGQGSFGCVFIAKPK---SNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLEC 70
+G+G+FG V + + N+ L + Q+E ++ L+ F+++
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHS-DFIVKY 76
Query: 71 FGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHD 130
G ++ G G + L++EY G L D +++ L + ++ I +G+ ++
Sbjct: 77 RG--VSYGP-GRQSLRLVMEYLPSGCLRDFLQRHRAR-LDASRLLLYSSQICKGMEYLGS 132
Query: 131 SGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLY-LAPET 189
VH D+ NIL+ + KIAD G+AK K +P++ APE+
Sbjct: 133 RRCVHRDLAARNILVESEAH----VKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 188
Query: 190 VVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSID-QLFSIIGDEHSLPEI 242
+ ++ SD+W+ G V+ E+ + + CS + ++G E +P +
Sbjct: 189 LSDNIFSRQSDVWSFGVVLYELFT-----YCDKSCSPSAEFLRMMGSERDVPAL 237
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 82/193 (42%), Gaps = 11/193 (5%)
Query: 87 LLLEYAAGGTLGDLIEKC-----NGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPD 141
+LLE AGG L + + + L D+ H R I G ++ ++ ++H D+
Sbjct: 111 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 170
Query: 142 NILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDI 201
N LL G+ VAKI D G+A+ + ++ PE ++ + + +D
Sbjct: 171 NCLLTCPGPGR-VAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT 229
Query: 202 WALGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVR 260
W+ G ++ E+ S G + K + + + + G P V + + +C+
Sbjct: 230 WSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR----IMTQCWQH 285
Query: 261 KPAFRFTAEMLLD 273
+P R ++L+
Sbjct: 286 QPEDRPNFAIILE 298
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 89/207 (42%), Gaps = 35/207 (16%)
Query: 97 LGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAK 156
L + CNG+ PE V+ F +L+G+G H +H D+KP N+L+ ++G+ K
Sbjct: 87 LKKYFDSCNGDLDPEI-VKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLI--NRNGEL--K 141
Query: 157 IADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVV--QHMQEAPSDIWALGCVVLEML-S 213
+A+ G+A+ R S L+ P V+ + D+W+ GC+ E+ +
Sbjct: 142 LANFGLARAFGIPVRCY---SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANA 198
Query: 214 GRQAWVVKE-DCSIDQLFSIIG--------------DEHSLPEIPS---------RVSKE 249
GR + + D + ++F ++G D P P+ +++
Sbjct: 199 GRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNAT 258
Query: 250 ARDFLRRCFVRKPAFRFTAEMLLDDPF 276
RD L+ P R +AE L P+
Sbjct: 259 GRDLLQNLLKCNPVQRISAEEALQHPY 285
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 82/193 (42%), Gaps = 11/193 (5%)
Query: 87 LLLEYAAGGTLGDLIEKC-----NGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPD 141
+LLE AGG L + + + L D+ H R I G ++ ++ ++H D+
Sbjct: 128 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 187
Query: 142 NILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDI 201
N LL G+ VAKI D G+A+ + ++ PE ++ + + +D
Sbjct: 188 NCLLTCPGPGR-VAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT 246
Query: 202 WALGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVR 260
W+ G ++ E+ S G + K + + + + G P V + + +C+
Sbjct: 247 WSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR----IMTQCWQH 302
Query: 261 KPAFRFTAEMLLD 273
+P R ++L+
Sbjct: 303 QPEDRPNFAIILE 315
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 94/253 (37%), Gaps = 68/253 (26%)
Query: 67 VLECFGEEITMGENGEMAYNLLLEYAAGGTLG---------------DLIEKCNGNGLPE 111
+L+C E N +M L+ ++ G G I K N GLP
Sbjct: 80 LLKCVRESDPSDPNKDMVVQLIDDFKISGMNGIHVCMVFEVLGHHLLKWIIKSNYQGLPV 139
Query: 112 KDVRHFTRCILEGIGHIHDS-GYVHCDVKPDNILL------------------------- 145
+ V+ R +L+G+ ++H +H D+KP+NIL+
Sbjct: 140 RCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRRMAAEATEWQKAGAPPP 199
Query: 146 ----VAT--------------QSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAP 187
V+T + K KIADLG A C K T Y +
Sbjct: 200 SGSAVSTAPAADLLVNPLDPRNADKIRVKIADLGNA-----CWVHKHFTEDIQTRQYRSI 254
Query: 188 ETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVK--EDCSIDQ--LFSIIGDEHSLPEIP 243
E ++ P+DIW+ C+ E+ +G + ED S D+ + II S+P
Sbjct: 255 EVLIGAGYSTPADIWSTACMAFELATGDYLFEPHSGEDYSRDEDHIAHIIELLGSIPRHF 314
Query: 244 SRVSKEARDFLRR 256
+ K +R+F R
Sbjct: 315 ALSGKYSREFFNR 327
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 97/230 (42%), Gaps = 23/230 (10%)
Query: 14 IGQGSFGCVFIAKP---KSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNL---NGCPFV 67
+G+G+FG V + + + N+ + + ++E E+ +L N +
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
C+ G L++EY G+L D ++K + + + +T I +G+ +
Sbjct: 85 GVCYSA-------GRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEY 136
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLY-LA 186
+ Y+H D+ NIL+ + KI D G+ K K +P++ A
Sbjct: 137 LGTKRYIHRDLATRNILV----ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 192
Query: 187 PETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDE 236
PE++ + SD+W+ G V+ E+ + ++ K + +IG++
Sbjct: 193 PESLTESKFSVASDVWSFGVVLYELFT----YIEKSKSPPAEFMRMIGND 238
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 75/166 (45%), Gaps = 17/166 (10%)
Query: 96 TLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIH--DSGYVHCDVKPDNILLVATQSGKF 153
L DL+ N G+ R F + + + + + +HCD+KP+NILL +
Sbjct: 141 NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRS-- 198
Query: 154 VAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS 213
KI D G + C+ + + Y +PE ++ + D+W+LGC+++EM +
Sbjct: 199 AIKIVDFGSS-----CQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHT 253
Query: 214 GRQAWV-VKEDCSIDQLFSIIG--DEHSLPEIPSRVSKEARDFLRR 256
G + E ++++ ++G H L + P +AR F +
Sbjct: 254 GEPLFSGANEVDQMNKIVEVLGIPPAHILDQAP-----KARKFFEK 294
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 71/157 (45%), Gaps = 10/157 (6%)
Query: 81 GEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKP 140
G L++EY G+L D ++K + + + +T I +G+ ++ Y+H D+
Sbjct: 115 GRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLAT 173
Query: 141 DNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLY-LAPETVVQHMQEAPS 199
NIL+ + KI D G+ K K +P++ APE++ + S
Sbjct: 174 RNILV----ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVAS 229
Query: 200 DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDE 236
D+W+ G V+ E+ + ++ K + +IG++
Sbjct: 230 DVWSFGVVLYELFT----YIEKSKSPPAEFMRMIGND 262
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 96/230 (41%), Gaps = 23/230 (10%)
Query: 14 IGQGSFGCVFIAKP---KSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNL---NGCPFV 67
+G+G+FG V + + + N+ + + ++E E+ +L N +
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
C+ G L++EY G+L D ++K + + + +T I +G+ +
Sbjct: 83 GVCYSA-------GRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEY 134
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLY-LA 186
+ Y+H D+ NIL+ KI D G+ K K +P++ A
Sbjct: 135 LGTKRYIHRDLATRNILVENENR----VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 190
Query: 187 PETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDE 236
PE++ + SD+W+ G V+ E+ + ++ K + +IG++
Sbjct: 191 PESLTESKFSVASDVWSFGVVLYELFT----YIEKSKSPPAEFMRMIGND 236
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 82/193 (42%), Gaps = 11/193 (5%)
Query: 87 LLLEYAAGGTLGDLIEKC-----NGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPD 141
+L+E AGG L + + + L D+ H R I G ++ ++ ++H D+
Sbjct: 125 ILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 184
Query: 142 NILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDI 201
N LL G+ VAKI D G+A+ + ++ PE ++ + + +D
Sbjct: 185 NCLLTCPGPGR-VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT 243
Query: 202 WALGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVR 260
W+ G ++ E+ S G + K + + + + G P V + + +C+
Sbjct: 244 WSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR----IMTQCWQH 299
Query: 261 KPAFRFTAEMLLD 273
+P R ++L+
Sbjct: 300 QPEDRPNFAIILE 312
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 75/166 (45%), Gaps = 17/166 (10%)
Query: 96 TLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIH--DSGYVHCDVKPDNILLVATQSGKF 153
L DL+ N G+ R F + + + + + +HCD+KP+NILL +
Sbjct: 122 NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRS-- 179
Query: 154 VAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS 213
KI D G + C+ + + Y +PE ++ + D+W+LGC+++EM +
Sbjct: 180 AIKIVDFGSS-----CQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHT 234
Query: 214 GRQAWV-VKEDCSIDQLFSIIG--DEHSLPEIPSRVSKEARDFLRR 256
G + E ++++ ++G H L + P +AR F +
Sbjct: 235 GEPLFSGANEVDQMNKIVEVLGIPPAHILDQAP-----KARKFFEK 275
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 89/200 (44%), Gaps = 23/200 (11%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ EY + G+L D ++ G L + I G+ ++ YVH D++ NIL+
Sbjct: 256 IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV- 314
Query: 147 ATQSGKFVAKIADLGVAK---RSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWA 203
V K+AD G+ + + + RQ ++ T APE + SD+W+
Sbjct: 315 ---GENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWT----APEAALYGRFTIKSDVWS 367
Query: 204 LGCVVLEMLS-GRQAW--VVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVR 260
G ++ E+ + GR + +V + +DQ + + +P P + D + +C+ +
Sbjct: 368 FGILLTELTTKGRVPYPGMVNREV-LDQ----VERGYRMP-CPPECPESLHDLMCQCWRK 421
Query: 261 KPAFRFTAEML---LDDPFV 277
P R T E L L+D F
Sbjct: 422 DPEERPTFEYLQAFLEDYFT 441
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 71/157 (45%), Gaps = 10/157 (6%)
Query: 81 GEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKP 140
G L++EY G+L D ++K + + + +T I +G+ ++ Y+H D+
Sbjct: 88 GRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLAT 146
Query: 141 DNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLY-LAPETVVQHMQEAPS 199
NIL+ + KI D G+ K K +P++ APE++ + S
Sbjct: 147 RNILV----ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVAS 202
Query: 200 DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDE 236
D+W+ G V+ E+ + ++ K + +IG++
Sbjct: 203 DVWSFGVVLYELFT----YIEKSKSPPAEFMRMIGND 235
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 60/132 (45%), Gaps = 6/132 (4%)
Query: 87 LLLEYAAGGTLGDLIEKC-----NGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPD 141
+LLE AGG L + + + L D+ H R I G ++ ++ ++H D+
Sbjct: 137 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 196
Query: 142 NILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDI 201
N LL G+ VAKI D G+A+ + ++ PE ++ + + +D
Sbjct: 197 NCLLTCPGPGR-VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT 255
Query: 202 WALGCVVLEMLS 213
W+ G ++ E+ S
Sbjct: 256 WSFGVLLWEIFS 267
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 23/200 (11%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ EY + G L D ++ G L + I G+ ++ YVH D++ NIL+
Sbjct: 89 IVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV- 147
Query: 147 ATQSGKFVAKIADLGVAK---RSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWA 203
V K+AD G+A+ + + RQ ++ T APE + SD+W+
Sbjct: 148 ---GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----APEAALYGRFTIKSDVWS 200
Query: 204 LGCVVLEMLS-GRQAW--VVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVR 260
G ++ E+ + GR + +V + +DQ + + +P P + D + +C+ +
Sbjct: 201 FGILLTELTTKGRVPYPGMVNREV-LDQ----VERGYRMP-CPPECPESLHDLMCQCWRK 254
Query: 261 KPAFRFTAEML---LDDPFV 277
P R T E L L+D F
Sbjct: 255 DPEERPTFEYLQAFLEDYFT 274
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 8/98 (8%)
Query: 124 GIGHIHDS---GYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG 180
G+ ++HD +H DVK NILL +F A + D G+AK + K ++RG
Sbjct: 151 GLAYLHDHCDPKIIHRDVKAANILL----DEEFEAVVGDFGLAKLMDY-KDXHVXXAVRG 205
Query: 181 TPLYLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAW 218
T ++APE + +D++ G ++LE+++G++A+
Sbjct: 206 TIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 243
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 23/200 (11%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ EY + G+L D ++ G L + I G+ ++ YVH D+ NIL+
Sbjct: 89 IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLAAANILV- 147
Query: 147 ATQSGKFVAKIADLGVAK---RSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWA 203
V K+AD G+A+ + + RQ ++ T APE + SD+W+
Sbjct: 148 ---GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----APEAALYGRFTIKSDVWS 200
Query: 204 LGCVVLEMLS-GRQAW--VVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVR 260
G ++ E+ + GR + +V + +DQ + + +P P + D + +C+ +
Sbjct: 201 FGILLTELTTKGRVPYPGMVNREV-LDQ----VERGYRMP-CPPECPESLHDLMCQCWRK 254
Query: 261 KPAFRFTAEML---LDDPFV 277
P R T E L L+D F
Sbjct: 255 DPEERPTFEYLQAFLEDYFT 274
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 97/230 (42%), Gaps = 23/230 (10%)
Query: 14 IGQGSFGCVFIAKP---KSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNL---NGCPFV 67
+G+G+FG V + + + N+ + + ++E E+ +L N +
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
C+ G L++EY G+L D ++K + + + +T I +G+ +
Sbjct: 84 GVCYSA-------GRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEY 135
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLY-LA 186
+ Y+H D+ NIL+ + KI D G+ K K +P++ A
Sbjct: 136 LGTKRYIHRDLATRNILV----ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 191
Query: 187 PETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDE 236
PE++ + SD+W+ G V+ E+ + ++ K + +IG++
Sbjct: 192 PESLTESKFSVASDVWSFGVVLYELFT----YIEKSKSPPAEFMRMIGND 237
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 97/230 (42%), Gaps = 23/230 (10%)
Query: 14 IGQGSFGCVFIAKP---KSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNL---NGCPFV 67
+G+G+FG V + + + N+ + + ++E E+ +L N +
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
C+ G L++EY G+L D ++K + + + +T I +G+ +
Sbjct: 81 GVCYSA-------GRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEY 132
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLY-LA 186
+ Y+H D+ NIL+ + KI D G+ K K +P++ A
Sbjct: 133 LGTKRYIHRDLATRNILV----ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 188
Query: 187 PETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDE 236
PE++ + SD+W+ G V+ E+ + ++ K + +IG++
Sbjct: 189 PESLTESKFSVASDVWSFGVVLYELFT----YIEKSKSPPAEFMRMIGND 234
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 121 ILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG 180
+L GI H+H +G +H D+KP NI++ KI D G+A+ + +P +
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVV----KSDCTLKILDFGLARTA--GTSFMMEPEV-V 187
Query: 181 TPLYLAPETVVQHMQEAPSDIWALGCVVLEML 212
T Y APE ++ + D+W++GC++ EM+
Sbjct: 188 TRYYRAPEVILGMGYKENVDLWSVGCIMGEMV 219
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 71/157 (45%), Gaps = 10/157 (6%)
Query: 81 GEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKP 140
G L++EY G+L D ++K + + + +T I +G+ ++ Y+H D+
Sbjct: 82 GRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLAT 140
Query: 141 DNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLY-LAPETVVQHMQEAPS 199
NIL+ + KI D G+ K K +P++ APE++ + S
Sbjct: 141 RNILV----ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVAS 196
Query: 200 DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDE 236
D+W+ G V+ E+ + ++ K + +IG++
Sbjct: 197 DVWSFGVVLYELFT----YIEKSKSPPAEFMRMIGND 229
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 71/157 (45%), Gaps = 10/157 (6%)
Query: 81 GEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKP 140
G L++EY G+L D ++K + + + +T I +G+ ++ Y+H D+
Sbjct: 83 GRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLAT 141
Query: 141 DNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLY-LAPETVVQHMQEAPS 199
NIL+ + KI D G+ K K +P++ APE++ + S
Sbjct: 142 RNILV----ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVAS 197
Query: 200 DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDE 236
D+W+ G V+ E+ + ++ K + +IG++
Sbjct: 198 DVWSFGVVLYELFT----YIEKSKSPPAEFMRMIGND 230
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 82/193 (42%), Gaps = 11/193 (5%)
Query: 87 LLLEYAAGGTLGDLIEKC-----NGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPD 141
+L+E AGG L + + + L D+ H R I G ++ ++ ++H D+
Sbjct: 110 ILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 169
Query: 142 NILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDI 201
N LL G+ VAKI D G+A+ + ++ PE ++ + + +D
Sbjct: 170 NCLLTCPGPGR-VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT 228
Query: 202 WALGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVR 260
W+ G ++ E+ S G + K + + + + G P V + + +C+
Sbjct: 229 WSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR----IMTQCWQH 284
Query: 261 KPAFRFTAEMLLD 273
+P R ++L+
Sbjct: 285 QPEDRPNFAIILE 297
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 71/157 (45%), Gaps = 10/157 (6%)
Query: 81 GEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKP 140
G L++EY G+L D ++K + + + +T I +G+ ++ Y+H D+
Sbjct: 84 GRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLAT 142
Query: 141 DNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLY-LAPETVVQHMQEAPS 199
NIL+ + KI D G+ K K +P++ APE++ + S
Sbjct: 143 RNILV----ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVAS 198
Query: 200 DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDE 236
D+W+ G V+ E+ + ++ K + +IG++
Sbjct: 199 DVWSFGVVLYELFT----YIEKSKSPPAEFMRMIGND 231
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 97/230 (42%), Gaps = 23/230 (10%)
Query: 14 IGQGSFGCVFIAKP---KSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNL---NGCPFV 67
+G+G+FG V + + + N+ + + ++E E+ +L N +
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
C+ G L++EY G+L D ++K + + + +T I +G+ +
Sbjct: 78 GVCYSA-------GRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEY 129
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLY-LA 186
+ Y+H D+ NIL+ + KI D G+ K K +P++ A
Sbjct: 130 LGTKRYIHRDLATRNILV----ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 185
Query: 187 PETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDE 236
PE++ + SD+W+ G V+ E+ + ++ K + +IG++
Sbjct: 186 PESLTESKFSVASDVWSFGVVLYELFT----YIEKSKSPPAEFMRMIGND 231
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 17/97 (17%)
Query: 121 ILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG 180
+L GI H+H +G +H D+KP NI++ KI D G+A+ + S
Sbjct: 140 MLCGIKHLHSAGIIHRDLKPSNIVV----KSDCTLKILDFGLARTA--------GTSFMM 187
Query: 181 TP-----LYLAPETVVQHMQEAPSDIWALGCVVLEML 212
TP Y APE ++ + D+W++GC++ EM+
Sbjct: 188 TPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMV 224
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 59/128 (46%), Gaps = 6/128 (4%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ EY G+L + K + + R I G+ ++ D G+VH D+ NIL+
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILI- 180
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPL-YLAPETVVQHMQEAPSDIWALG 205
+ V K++D G+++ + P+ + +PE + + SD+W+ G
Sbjct: 181 ---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 237
Query: 206 CVVLEMLS 213
V+ E++S
Sbjct: 238 IVLWEVMS 245
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 96/230 (41%), Gaps = 23/230 (10%)
Query: 14 IGQGSFGCVFIAKP---KSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNL---NGCPFV 67
+G+G+FG V + + + N+ + + ++E E+ +L N +
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
C+ G L++EY G+L D ++K + + + +T I +G+ +
Sbjct: 96 GVCYSA-------GRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEY 147
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLY-LA 186
+ Y+H D+ NIL+ KI D G+ K K +P++ A
Sbjct: 148 LGTKRYIHRDLATRNILVENENR----VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 203
Query: 187 PETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDE 236
PE++ + SD+W+ G V+ E+ + ++ K + +IG++
Sbjct: 204 PESLTESKFSVASDVWSFGVVLYELFT----YIEKSKSPPAEFMRMIGND 249
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 86/206 (41%), Gaps = 40/206 (19%)
Query: 109 LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
L + D+R + IL+ + + H G +H DVKP N+++ ++ D G+A+ +
Sbjct: 126 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK---LRLIDWGLAE--FY 180
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQH-MQEAPSDIWALGCVVLEMLSGRQA---------- 217
Q+++ + + + PE +V + M + D+W+LGC++ M+ ++
Sbjct: 181 HPGQEYNVRV-ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 239
Query: 218 ---------------WVVKEDCSIDQLFSIIGDEHSLP--------EIPSRVSKEARDFL 254
++ K + +D F+ I HS E VS EA DFL
Sbjct: 240 LVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFL 299
Query: 255 RRCFVRKPAFRFTAEMLLDDPFVKGV 280
+ R TA ++ P+ V
Sbjct: 300 DKLLRYDHQSRLTAREAMEHPYFYTV 325
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 98/222 (44%), Gaps = 31/222 (13%)
Query: 79 ENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDV 138
+ GE + L++EY G+L D + + + GL + + F + I EG+ ++H Y+H +
Sbjct: 82 DQGEKSVQLVMEYVPLGSLRDYLPR-HCVGLAQLLL--FAQQICEGMAYLHAQHYIHRAL 138
Query: 139 KPDNILLVATQSGKFVAKIADLGVAK-----RSRHCKRQKFDPSMRGTPLYLAPETVVQH 193
N+LL + KI D G+AK + R+ D + + APE + +
Sbjct: 139 AARNVLL----DNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV----FWYAPECLKEC 190
Query: 194 MQEAPSDIWALGCVVLEMLS---GRQAWVVK---------EDCSIDQLFSIIGDEHSLPE 241
SD+W+ G + E+L+ Q+ K ++ +L ++ LP
Sbjct: 191 KFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPR 250
Query: 242 IPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGVDEE 283
P R E ++ C+ + +FR T + L+ P ++ E+
Sbjct: 251 -PDRCPCEIYHLMKNCWETEASFRPTFQNLV--PILQTAQEK 289
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 17/97 (17%)
Query: 121 ILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG 180
+L GI H+H +G +H D+KP NI++ KI D G+A+ + S
Sbjct: 129 MLCGIKHLHSAGIIHRDLKPSNIVV----KSDCTLKILDFGLARTA--------GTSFMM 176
Query: 181 TP-----LYLAPETVVQHMQEAPSDIWALGCVVLEML 212
TP Y APE ++ + D+W++GC++ EM+
Sbjct: 177 TPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMV 213
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 96/230 (41%), Gaps = 23/230 (10%)
Query: 14 IGQGSFGCVFIAKP---KSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNL---NGCPFV 67
+G+G+FG V + + + N+ + + ++E E+ +L N +
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
C+ G L++EY G+L D ++K + + + +T I +G+ +
Sbjct: 96 GVCYSA-------GRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEY 147
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLY-LA 186
+ Y+H D+ NIL+ KI D G+ K K +P++ A
Sbjct: 148 LGTKRYIHRDLATRNILVENENR----VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 203
Query: 187 PETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDE 236
PE++ + SD+W+ G V+ E+ + ++ K + +IG++
Sbjct: 204 PESLTESKFSVASDVWSFGVVLYELFT----YIEKSKSPPAEFMRMIGND 249
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 98/222 (44%), Gaps = 31/222 (13%)
Query: 79 ENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDV 138
+ GE + L++EY G+L D + + + GL + + F + I EG+ ++H Y+H +
Sbjct: 81 DQGEKSVQLVMEYVPLGSLRDYLPR-HCVGLAQLLL--FAQQICEGMAYLHAQHYIHRAL 137
Query: 139 KPDNILLVATQSGKFVAKIADLGVAK-----RSRHCKRQKFDPSMRGTPLYLAPETVVQH 193
N+LL + KI D G+AK + R+ D + + APE + +
Sbjct: 138 AARNVLL----DNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV----FWYAPECLKEC 189
Query: 194 MQEAPSDIWALGCVVLEMLS---GRQAWVVK---------EDCSIDQLFSIIGDEHSLPE 241
SD+W+ G + E+L+ Q+ K ++ +L ++ LP
Sbjct: 190 KFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPR 249
Query: 242 IPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGVDEE 283
P R E ++ C+ + +FR T + L+ P ++ E+
Sbjct: 250 -PDRCPCEIYHLMKNCWETEASFRPTFQNLV--PILQTAQEK 288
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 86/206 (41%), Gaps = 40/206 (19%)
Query: 109 LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
L + D+R + IL+ + + H G +H DVKP N+++ ++ D G+A+ +
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK---LRLIDWGLAE--FY 182
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQH-MQEAPSDIWALGCVVLEMLSGRQA---------- 217
Q+++ + + + PE +V + M + D+W+LGC++ M+ ++
Sbjct: 183 HPGQEYNVRV-ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 241
Query: 218 ---------------WVVKEDCSIDQLFSIIGDEHSLP--------EIPSRVSKEARDFL 254
++ K + +D F+ I HS E VS EA DFL
Sbjct: 242 LVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFL 301
Query: 255 RRCFVRKPAFRFTAEMLLDDPFVKGV 280
+ R TA ++ P+ V
Sbjct: 302 DKLLRYDHQSRLTAREAMEHPYFYTV 327
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 86/206 (41%), Gaps = 40/206 (19%)
Query: 109 LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
L + D+R + IL+ + + H G +H DVKP N+++ ++ D G+A+ +
Sbjct: 127 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK---LRLIDWGLAE--FY 181
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQH-MQEAPSDIWALGCVVLEMLSGRQA---------- 217
Q+++ + + + PE +V + M + D+W+LGC++ M+ ++
Sbjct: 182 HPGQEYNVRV-ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 240
Query: 218 ---------------WVVKEDCSIDQLFSIIGDEHSLP--------EIPSRVSKEARDFL 254
++ K + +D F+ I HS E VS EA DFL
Sbjct: 241 LVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFL 300
Query: 255 RRCFVRKPAFRFTAEMLLDDPFVKGV 280
+ R TA ++ P+ V
Sbjct: 301 DKLLRYDHQSRLTAREAMEHPYFYTV 326
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 119 RCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSM 178
R I G+ ++ D GYVH D+ NIL+ + V K++D G+++ +
Sbjct: 125 RGIASGMKYLSDMGYVHRDLAARNILI----NSNLVCKVSDFGLSRVLEDDPEAAYTTRG 180
Query: 179 RGTPL-YLAPETVVQHMQEAPSDIWALGCVVLEMLS 213
P+ + +PE + + SD+W+ G V+ E++S
Sbjct: 181 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 62/139 (44%), Gaps = 17/139 (12%)
Query: 86 NLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILL 145
N + EY GGTL +I+ + P F + I G+ ++H +H D+ N L+
Sbjct: 83 NFITEYIKGGTLRGIIKSMDSQ-YPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLV 141
Query: 146 VATQSGKFVAKIADLGVAK------------RSRHCKRQKFDPSMRGTPLYLAPETVVQH 193
++ +AD G+A+ RS +K ++ G P ++APE +
Sbjct: 142 RENKN----VVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGR 197
Query: 194 MQEAPSDIWALGCVVLEML 212
+ D+++ G V+ E++
Sbjct: 198 SYDEKVDVFSFGIVLCEII 216
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/230 (20%), Positives = 96/230 (41%), Gaps = 23/230 (10%)
Query: 14 IGQGSFGCVFIAKP---KSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNL---NGCPFV 67
+G+G+FG V + + + N+ + + ++E E+ +L N +
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
C+ G L++EY G+L D ++ + + + +T I +G+ +
Sbjct: 81 GVCYSA-------GRRNLKLIMEYLPYGSLRDYLQ-AHAERIDHIKLLQYTSQICKGMEY 132
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLY-LA 186
+ Y+H D+ NIL+ + KI D G+ K K +P++ A
Sbjct: 133 LGTKRYIHRDLATRNILV----ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 188
Query: 187 PETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDE 236
PE++ + SD+W+ G V+ E+ + ++ K + +IG++
Sbjct: 189 PESLTESKFSVASDVWSFGVVLYELFT----YIEKSKSPPAEFMRMIGND 234
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 89/200 (44%), Gaps = 30/200 (15%)
Query: 109 LPEKDVRHFTRCILEGIGHIHDSGYV-HCDVKPDNILLVATQSGKFVAKIADLGVAKRSR 167
+P + ++ + +L +IH+ + H DVKP NIL+ ++G+ K++D G S
Sbjct: 148 IPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILM--DKNGR--VKLSDFG---ESE 200
Query: 168 HCKRQKFDPSMRGTPLYLAPETVVQH--MQEAPSDIWALGCVVLEMLSGRQAWVVKEDCS 225
+ +K S RGT ++ PE A DIW+LG + M + +K S
Sbjct: 201 YMVDKKIKGS-RGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLK--IS 257
Query: 226 IDQLFSIIGDE---------HSLPEIPSR--------VSKEARDFLRRCFVRKPAFRFTA 268
+ +LF+ I + H L + ++ +S E DFL+ + PA R T+
Sbjct: 258 LVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITS 317
Query: 269 EMLLDDPFVKGVDEELSREL 288
E L ++ + E RE
Sbjct: 318 EDALKHEWLADTNIEDLREF 337
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 119 RCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSM 178
R I G+ ++ D GYVH D+ NIL+ + V K++D G+++ +
Sbjct: 154 RGIASGMKYLSDMGYVHRDLAARNILI----NSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 179 RGTPL-YLAPETVVQHMQEAPSDIWALGCVVLEMLS 213
P+ + +PE + + SD+W+ G V+ E++S
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 94/239 (39%), Gaps = 30/239 (12%)
Query: 2 DSDGTSWFRGRVIGQGSFGCVFIAKPKSNSSFLP--------------PLMXXXXXXXXX 47
D W G IGQG FGC+++A S+ S PL
Sbjct: 31 DMAKKEWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRA 90
Query: 48 XXXLQKEKEVFDNLNGCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGN 107
Q +K + V + +G + +NG+ +Y ++ G L + E N
Sbjct: 91 AKPEQIQKWIRTRKLKYLGVPKYWGSGLH-DKNGK-SYRFMIMDRFGSDLQKIYE-ANAK 147
Query: 108 GLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSR 167
K V + IL+ + +IH+ YVH D+K N+LL + + D G+A R
Sbjct: 148 RFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVY--LVDYGLA--YR 203
Query: 168 HC-----KRQKFDPSMRGTPLYLAPETVVQHMQEAPS---DIWALGCVVLEMLSGRQAW 218
+C K K DP R + ++ H APS D+ LG +++ L+G W
Sbjct: 204 YCPEGVHKEYKEDPK-RCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPW 261
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 26/134 (19%)
Query: 121 ILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKR--------- 171
+++ I ++H G +H D+KP NILL + + K+AD G+++ + +R
Sbjct: 118 LIKVIKYLHSGGLLHRDMKPSNILL----NAECHVKVADFGLSRSFVNIRRVTNNIPLSI 173
Query: 172 ----QKFD------PSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVV 220
+ FD T Y APE ++ + D+W+LGC++ E+L G+ +
Sbjct: 174 NENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKP--IF 231
Query: 221 KEDCSIDQLFSIIG 234
+++QL IIG
Sbjct: 232 PGSSTMNQLERIIG 245
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 94/239 (39%), Gaps = 30/239 (12%)
Query: 2 DSDGTSWFRGRVIGQGSFGCVFIAKPKSNSSFLP--------------PLMXXXXXXXXX 47
D W G IGQG FGC+++A S+ S PL
Sbjct: 31 DMAKKEWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRA 90
Query: 48 XXXLQKEKEVFDNLNGCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGN 107
Q +K + V + +G + +NG+ +Y ++ G L + E N
Sbjct: 91 AKPEQIQKWIRTRKLKYLGVPKYWGSGLH-DKNGK-SYRFMIMDRFGSDLQKIYE-ANAK 147
Query: 108 GLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSR 167
K V + IL+ + +IH+ YVH D+K N+LL + + D G+A R
Sbjct: 148 RFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVY--LVDYGLA--YR 203
Query: 168 HC-----KRQKFDPSMRGTPLYLAPETVVQHMQEAPS---DIWALGCVVLEMLSGRQAW 218
+C K K DP R + ++ H APS D+ LG +++ L+G W
Sbjct: 204 YCPEGVHKEYKEDPK-RCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPW 261
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 92/204 (45%), Gaps = 13/204 (6%)
Query: 14 IGQGSFGCVFIAKPK---SNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLEC 70
+G+G+FG V + + N+ L + Q+E ++ L+ F+++
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHS-DFIVKY 89
Query: 71 FGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHD 130
G ++ G G + L++EY G L D +++ L + ++ I +G+ ++
Sbjct: 90 RG--VSYGP-GRQSLRLVMEYLPSGCLRDFLQRHRAR-LDASRLLLYSSQICKGMEYLGS 145
Query: 131 SGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLY-LAPET 189
VH D+ NIL+ + KIAD G+AK K +P++ APE+
Sbjct: 146 RRCVHRDLAARNILVESEAH----VKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 201
Query: 190 VVQHMQEAPSDIWALGCVVLEMLS 213
+ ++ SD+W+ G V+ E+ +
Sbjct: 202 LSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 60/128 (46%), Gaps = 6/128 (4%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ EY G+L + +G + V R + G+ ++ D GYVH D+ N+L+
Sbjct: 127 IVTEYMENGSLDTFLRTHDGQFTIMQLV-GMLRGVGAGMRYLSDLGYVHRDLAARNVLV- 184
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPL-YLAPETVVQHMQEAPSDIWALG 205
V K++D G+++ + + P+ + APE + + SD+W+ G
Sbjct: 185 ---DSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFG 241
Query: 206 CVVLEMLS 213
V+ E+L+
Sbjct: 242 VVMWEVLA 249
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 103/234 (44%), Gaps = 19/234 (8%)
Query: 14 IGQGSFGCVFIAKPK---SNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLEC 70
+G+G+FG V + + N+ L + Q+E ++ L+ F+++
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHS-DFIVKY 77
Query: 71 FGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHD 130
G ++ G G + L++EY G L D +++ L + ++ I +G+ ++
Sbjct: 78 RG--VSYGP-GRQSLRLVMEYLPSGCLRDFLQRHRAR-LDASRLLLYSSQICKGMEYLGS 133
Query: 131 SGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLY-LAPET 189
VH D+ NIL+ + KIAD G+AK K +P++ APE+
Sbjct: 134 RRCVHRDLAARNILVESEAH----VKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 189
Query: 190 VVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSID-QLFSIIGDEHSLPEI 242
+ ++ SD+W+ G V+ E+ + + CS + ++G E +P +
Sbjct: 190 LSDNIFSRQSDVWSFGVVLYELFT-----YCDKSCSPSAEFLRMMGCERDVPAL 238
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 73/158 (46%), Gaps = 12/158 (7%)
Query: 81 GEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKP 140
G L++EY G+L D ++K + + + +T I +G+ ++ Y+H D+
Sbjct: 84 GRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLAT 142
Query: 141 DNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG-TPLY-LAPETVVQHMQEAP 198
NIL+ KI D G+ K K + F G +P++ APE++ +
Sbjct: 143 RNILVENENR----VKIGDFGLTKVLPQDK-EFFKVKEPGESPIFWYAPESLTESKFSVA 197
Query: 199 SDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDE 236
SD+W+ G V+ E+ + ++ K + +IG++
Sbjct: 198 SDVWSFGVVLYELFT----YIEKSKSPPAEFMRMIGND 231
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 74/167 (44%), Gaps = 13/167 (7%)
Query: 51 LQKEKEVFDNLNGCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLP 110
+ +E ++ L+ P+++ G + E A L++E A GG L + +P
Sbjct: 57 MMREAQIMHQLDN-PYIVRLIG--VCQAE----ALMLVMEMAGGGPLHKFLVG-KREEIP 108
Query: 111 EKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCK 170
+V + G+ ++ + +VH D+ N+LLV + AKI+D G++K
Sbjct: 109 VSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLV----NRHYAKISDFGLSKALGADD 164
Query: 171 RQKFDPSMRGTPL-YLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQ 216
S PL + APE + + SD+W+ G + E LS Q
Sbjct: 165 SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQ 211
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 108/273 (39%), Gaps = 38/273 (13%)
Query: 13 VIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLECFG 72
+ +G FGCV+ A+ + + Q E+E+F L F
Sbjct: 22 IKARGRFGCVWKAQ------LMNDFVAVKIFPLQDKQSWQSEREIFSTPGMKHENLLQFI 75
Query: 73 EEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDS- 131
G N E+ L+ + G+L D ++ GN + ++ H + G+ ++H+
Sbjct: 76 AAEKRGSNLEVELWLITAFHDKGSLTDYLK---GNIITWNELCHVAETMSRGLSYLHEDV 132
Query: 132 ----------GYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGT 181
H D K N+LL A +AD G+A R K GT
Sbjct: 133 PWCRGEGHKPSIAHRDFKSKNVLL----KSDLTAVLADFGLAVRFEPGKPPGDTHGQVGT 188
Query: 182 PLYLAPETV---VQHMQEA--PSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLF----SI 232
Y+APE + + ++A D++A+G V+ E++S +A D +D+
Sbjct: 189 RRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKA----ADGPVDEYMLPFEEE 244
Query: 233 IGDEHSLPEIPS-RVSKEARDFLRRCFVRKPAF 264
IG SL E+ V K+ R ++ +++ P
Sbjct: 245 IGQHPSLEELQEVVVHKKMRPTIKDHWLKHPGL 277
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 79/201 (39%), Gaps = 31/201 (15%)
Query: 90 EYAAGGTLGDLIEKCNG--NGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
EY GG+L D I + + E +++ + G+ +IH VH D+KP NI +
Sbjct: 87 EYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISR 146
Query: 148 TQ---------------SGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQ 192
T S K + KI DLG H R G +LA E + +
Sbjct: 147 TSIPNAASEEGDEDDWASNKVMFKIGDLG------HVTRISSPQVEEGDSRFLANEVLQE 200
Query: 193 HMQEAP-SDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEAR 251
+ P +DI+AL V+ + DQ I + LP IP +S+E
Sbjct: 201 NYTHLPKADIFALALTVVXAAGAEPL-----PRNGDQWHEI--RQGRLPRIPQVLSQEFT 253
Query: 252 DFLRRCFVRKPAFRFTAEMLL 272
+ L+ P R +A L+
Sbjct: 254 ELLKVMIHPDPERRPSAMALV 274
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 83/189 (43%), Gaps = 23/189 (12%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ E+ G+L + + +G + R I G+ ++ D YVH + NIL+
Sbjct: 85 IITEFMENGSLDSFLRQNDGQ-FTVIQLVGMLRGIAAGMKYLADMNYVHRALAARNILV- 142
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGT-----PL-YLAPETVVQHMQEAPSD 200
+ V K++D G+ SR + DP+ P+ + APE + + SD
Sbjct: 143 ---NSNLVCKVSDFGL---SRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASD 196
Query: 201 IWALGCVVLEMLS--GRQAWVVKEDCSIDQLFSIIGDEHSLP---EIPSRVSKEARDFLR 255
+W+ G V+ E++S R W D + + + I ++ LP + PS + + D +
Sbjct: 197 VWSYGIVMWEVMSYGERPYW----DMTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQ 252
Query: 256 RCFVRKPAF 264
+ +P F
Sbjct: 253 KDRNHRPKF 261
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 19/170 (11%)
Query: 109 LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
L E + R ++ +G++ +H D+K +NI++ + F K+ D G A +
Sbjct: 127 LDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVI----AEDFTIKLIDFGSAA---Y 179
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSID 227
+R K + GT Y APE ++ + P ++W+LG + ++ + C ++
Sbjct: 180 LERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF-----CELE 234
Query: 228 QLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFV 277
+ ++ H P VSKE + P R T E L+ DP+V
Sbjct: 235 E--TVEAAIHP----PYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWV 278
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 68/157 (43%), Gaps = 12/157 (7%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ EY G+L + K +G + R I G+ ++ D VH D+ NIL+
Sbjct: 107 IITEYMENGSLDAFLRKNDGR-FTVIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILV- 164
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPL-YLAPETVVQHMQEAPSDIWALG 205
+ V K++D G+++ + P+ + APE + + SD+W+ G
Sbjct: 165 ---NSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYG 221
Query: 206 CVVLEMLS--GRQAWVVKEDCSIDQLFSIIGDEHSLP 240
V+ E++S R W D S + I + + LP
Sbjct: 222 IVMWEVMSYGERPYW----DMSNQDVIKAIEEGYRLP 254
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/232 (19%), Positives = 98/232 (42%), Gaps = 23/232 (9%)
Query: 12 RVIGQGSFGCVFIAKP---KSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNL---NGCP 65
R +G+G+FG V + + + N+ + + ++E E+ +L N
Sbjct: 19 RQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 66 FVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGI 125
+ C+ G L++E+ G+L + ++K + + + +T I +G+
Sbjct: 79 YKGVCYSA-------GRRNLKLIMEFLPYGSLREYLQK-HKERIDHIKLLQYTSQICKGM 130
Query: 126 GHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLY- 184
++ Y+H D+ NIL+ + KI D G+ K K +P++
Sbjct: 131 EYLGTKRYIHRDLATRNILV----ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 186
Query: 185 LAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDE 236
APE++ + SD+W+ G V+ E+ + ++ K + +IG++
Sbjct: 187 YAPESLTESKFSVASDVWSFGVVLYELFT----YIEKSKSPPAEFMRMIGND 234
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 94/239 (39%), Gaps = 30/239 (12%)
Query: 2 DSDGTSWFRGRVIGQGSFGCVFIAKPKSNSSFLP--------------PLMXXXXXXXXX 47
D +W G IGQG FGC+++A S+ S PL
Sbjct: 31 DMAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRA 90
Query: 48 XXXLQKEKEVFDNLNGCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGN 107
Q +K + V + +G + +NG+ +Y ++ G L + E N
Sbjct: 91 AKPEQIQKWIRTRKLKYLGVPKYWGSGLH-DKNGK-SYRFMIMDRFGSDLQKIYE-ANAK 147
Query: 108 GLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSR 167
K V + IL+ + +IH+ YVH D+K N+LL + + D G+A R
Sbjct: 148 RFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVY--LVDYGLA--YR 203
Query: 168 HC-----KRQKFDPSMRGTPLYLAPETVVQHMQEAPS---DIWALGCVVLEMLSGRQAW 218
+C K DP R + ++ H APS D+ LG +++ L+G W
Sbjct: 204 YCPEGVHKAYAADPK-RCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPW 261
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 8/98 (8%)
Query: 124 GIGHIHDS---GYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG 180
G+ ++HD +H DVK NILL +F A + D G+AK + K ++RG
Sbjct: 143 GLAYLHDHCDPKIIHRDVKAANILL----DEEFEAVVGDFGLAKLMDY-KDXHVXXAVRG 197
Query: 181 TPLYLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAW 218
++APE + +D++ G ++LE+++G++A+
Sbjct: 198 XIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 235
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 10/157 (6%)
Query: 81 GEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKP 140
G L++EY G+L D ++K + + + +T I +G+ ++ Y+H ++
Sbjct: 85 GRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRNLAT 143
Query: 141 DNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLY-LAPETVVQHMQEAPS 199
NIL+ KI D G+ K K +P++ APE++ + S
Sbjct: 144 RNILVENENR----VKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVAS 199
Query: 200 DIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDE 236
D+W+ G V+ E+ + ++ K + +IG++
Sbjct: 200 DVWSFGVVLYELFT----YIEKSKSPPAEFMRMIGND 232
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 91/204 (44%), Gaps = 13/204 (6%)
Query: 14 IGQGSFGCVFIAKPK---SNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLEC 70
+G+G+FG V + + N+ L + Q+E ++ L+ F+++
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHS-DFIVKY 73
Query: 71 FGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHD 130
G ++ G G L++EY G L D +++ L + ++ I +G+ ++
Sbjct: 74 RG--VSYGP-GRPELRLVMEYLPSGCLRDFLQRHRAR-LDASRLLLYSSQICKGMEYLGS 129
Query: 131 SGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLY-LAPET 189
VH D+ NIL+ + KIAD G+AK K +P++ APE+
Sbjct: 130 RRCVHRDLAARNILVESEAH----VKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPES 185
Query: 190 VVQHMQEAPSDIWALGCVVLEMLS 213
+ ++ SD+W+ G V+ E+ +
Sbjct: 186 LSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/272 (19%), Positives = 114/272 (41%), Gaps = 31/272 (11%)
Query: 6 TSWFRGRVIGQGSFGCVF--IAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVF----- 58
T + + +V+G G+FG V+ + P+ +P + + E +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 59 DNLNGCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFT 118
DN + C + C + L+++ G L D + + N + + + ++
Sbjct: 77 DNPHVCRLLGICLTSTV----------QLIMQLMPFGCLLDYVREHKDN-IGSQYLLNWC 125
Query: 119 RCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSM 178
I +G+ ++ D VH D+ N+L+ Q KI D G AK +++
Sbjct: 126 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH----VKITDFGRAKLLGAEEKEYHAEGG 181
Query: 179 RGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEH 237
+ ++A E+++ + SD+W+ G V E+++ G + + + ++ SI+
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGE 238
Query: 238 SLPEIPSRVSKEARDFLRRCFV----RKPAFR 265
LP+ P + + +R+C++ +P FR
Sbjct: 239 RLPQ-PPICTIDVYMIMRKCWMIDADSRPKFR 269
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/272 (19%), Positives = 114/272 (41%), Gaps = 31/272 (11%)
Query: 6 TSWFRGRVIGQGSFGCVF--IAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVF----- 58
T + + +V+G G+FG V+ + P+ +P + + E +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 59 DNLNGCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFT 118
DN + C + C + L+ + G L D + + N + + + ++
Sbjct: 75 DNPHVCRLLGICLTSTV----------QLITQLMPFGCLLDYVREHKDN-IGSQYLLNWC 123
Query: 119 RCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSM 178
I +G+ ++ D VH D+ N+L+ Q KI D G+AK +++
Sbjct: 124 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH----VKITDFGLAKLLGAEEKEYHAEGG 179
Query: 179 RGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEH 237
+ ++A E+++ + SD+W+ G V E+++ G + + + ++ SI+
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGE 236
Query: 238 SLPEIPSRVSKEARDFLRRCFV----RKPAFR 265
LP+ P + + +R+C++ +P FR
Sbjct: 237 RLPQ-PPICTIDVYMIMRKCWMIDADSRPKFR 267
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/272 (19%), Positives = 114/272 (41%), Gaps = 31/272 (11%)
Query: 6 TSWFRGRVIGQGSFGCVF--IAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVF----- 58
T + + +V+G G+FG V+ + P+ +P + + E +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 59 DNLNGCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFT 118
DN + C + C + L+ + G L D + + N + + + ++
Sbjct: 78 DNPHVCRLLGICLTSTV----------QLITQLMPFGCLLDYVREHKDN-IGSQYLLNWC 126
Query: 119 RCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSM 178
I +G+ ++ D VH D+ N+L+ Q KI D G+AK +++
Sbjct: 127 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH----VKITDFGLAKLLGAEEKEYHAEGG 182
Query: 179 RGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEH 237
+ ++A E+++ + SD+W+ G V E+++ G + + + ++ SI+
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGE 239
Query: 238 SLPEIPSRVSKEARDFLRRCFV----RKPAFR 265
LP+ P + + +R+C++ +P FR
Sbjct: 240 RLPQ-PPICTIDVYMIMRKCWMIDADSRPKFR 270
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 89/210 (42%), Gaps = 24/210 (11%)
Query: 12 RVIGQGSFGCVF--IAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLN-----GC 64
+V+G G+FG V+ I P + +P + + KE+ D G
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSP----KANKEILDEAYVMAGVGS 78
Query: 65 PFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEG 124
P+V G +T L+ + G L D + + G L +D+ ++ I +G
Sbjct: 79 PYVSRLLGICLTS------TVQLVTQLMPYGCLLDHVRENRGR-LGSQDLLNWCMQIAKG 131
Query: 125 IGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPL- 183
+ ++ D VH D+ N+L+ + KI D G+A R ++ P+
Sbjct: 132 MSYLEDVRLVHRDLAARNVLVKSPNH----VKITDFGLA-RLLDIDETEYHADGGKVPIK 186
Query: 184 YLAPETVVQHMQEAPSDIWALGCVVLEMLS 213
++A E++++ SD+W+ G V E+++
Sbjct: 187 WMALESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 82/201 (40%), Gaps = 31/201 (15%)
Query: 90 EYAAGGTLGDLIEKCNG--NGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
EY GG+L D I + + E +++ + G+ +IH VH D+KP NI +
Sbjct: 91 EYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISR 150
Query: 148 TQ---------------SGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQ 192
T S K + KI DLG H R G +LA E + +
Sbjct: 151 TSIPNAASEEGDEDDWASNKVMFKIGDLG------HVTRISSPQVEEGDSRFLANEVLQE 204
Query: 193 HMQEAP-SDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEAR 251
+ P +DI+AL V+ +G + + DQ I + LP IP +S+E
Sbjct: 205 NYTHLPKADIFALALTVV-CAAGAEPL----PRNGDQWHEI--RQGRLPRIPQVLSQEFT 257
Query: 252 DFLRRCFVRKPAFRFTAEMLL 272
+ L+ P R +A L+
Sbjct: 258 ELLKVMIHPDPERRPSAMALV 278
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 10/111 (9%)
Query: 114 VRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQ-SGKFVAKIA---------DLGVA 163
+R I + + +H + H D+KP+NIL V + + + KI D+ V
Sbjct: 120 IRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVV 179
Query: 164 KRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLSG 214
+ ++ T Y APE ++ P D+W++GC+++E G
Sbjct: 180 DFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 34/208 (16%)
Query: 96 TLGDLIEKCNGNGLPEKDVRHFT-----RCILEGIGHIHDSGYVHCDVKPDNILLVATQS 150
L DL+E N + K + + R I G+ H+H +H D+KP NIL+ + S
Sbjct: 112 NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILV--STS 169
Query: 151 GKFVAK-----------IADLGVAKR----SRHCKRQKFDPSMRGTPLYLAPETVVQHMQ 195
+F A I+D G+ K+ + +PS GT + APE + + +
Sbjct: 170 SRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPS--GTSGWRAPELLEESTK 227
Query: 196 EAPS---DIWALGCVVLEMLS-GRQAW---VVKEDCSIDQLFSIIGDEHSLPEIPSRVSK 248
+ DI+++GCV +LS G+ + +E I +FS+ DE S ++
Sbjct: 228 RRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSL--DEMKCLHDRSLIA- 284
Query: 249 EARDFLRRCFVRKPAFRFTAEMLLDDPF 276
EA D + + P R TA +L P
Sbjct: 285 EATDLISQMIDHDPLKRPTAMKVLRHPL 312
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/272 (19%), Positives = 114/272 (41%), Gaps = 31/272 (11%)
Query: 6 TSWFRGRVIGQGSFGCVF--IAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVF----- 58
T + + +V+G G+FG V+ + P+ +P + + E +
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 84
Query: 59 DNLNGCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFT 118
DN + C + C + L+ + G L D + + N + + + ++
Sbjct: 85 DNPHVCRLLGICLTSTV----------QLITQLMPFGCLLDYVREHKDN-IGSQYLLNWC 133
Query: 119 RCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSM 178
I +G+ ++ D VH D+ N+L+ Q KI D G+AK +++
Sbjct: 134 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH----VKITDFGLAKLLGAEEKEYHAEGG 189
Query: 179 RGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEH 237
+ ++A E+++ + SD+W+ G V E+++ G + + + ++ SI+
Sbjct: 190 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGE 246
Query: 238 SLPEIPSRVSKEARDFLRRCFV----RKPAFR 265
LP+ P + + +R+C++ +P FR
Sbjct: 247 RLPQ-PPICTIDVYMIMRKCWMIDADSRPKFR 277
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 82/201 (40%), Gaps = 31/201 (15%)
Query: 90 EYAAGGTLGDLIEKCNG--NGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
EY GG+L D I + + E +++ + G+ +IH VH D+KP NI +
Sbjct: 89 EYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISR 148
Query: 148 TQ---------------SGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQ 192
T S K + KI DLG H R G +LA E + +
Sbjct: 149 TSIPNAASEEGDEDDWASNKVMFKIGDLG------HVTRISSPQVEEGDSRFLANEVLQE 202
Query: 193 HMQEAP-SDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEAR 251
+ P +DI+AL V+ +G + + DQ I + LP IP +S+E
Sbjct: 203 NYTHLPKADIFALALTVV-CAAGAEPL----PRNGDQWHEI--RQGRLPRIPQVLSQEFT 255
Query: 252 DFLRRCFVRKPAFRFTAEMLL 272
+ L+ P R +A L+
Sbjct: 256 ELLKVMIHPDPERRPSAMALV 276
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 100/250 (40%), Gaps = 67/250 (26%)
Query: 12 RVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLECF 71
+IG+GS+G V++A K+ + ++K +F++L C +L
Sbjct: 34 HLIGRGSYGYVYLAYDKNANK---------------NVAIKKVNRMFEDLIDCKRILR-- 76
Query: 72 GEEITMGENGEMAYNLLL-------EYAAGGTLGDLIEKCNGN---------GLPEKDVR 115
EIT+ + Y + L + L ++E + + L E+ V+
Sbjct: 77 --EITILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVK 134
Query: 116 HFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAK----------- 164
+L G IH+SG +H D+KP N LL S KI D G+A+
Sbjct: 135 TILYNLLLGEKFIHESGIIHRDLKPANCLLNQDCS----VKICDFGLARTINSDKDIHIV 190
Query: 165 --------------RSRHCKRQKFDPSMRGTPLYLAPETV-VQHMQEAPSDIWALGCVVL 209
+++ K+Q S T Y APE + +Q DIW+ GC+
Sbjct: 191 NDLEEKEENEEPGPHNKNLKKQL--TSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFA 248
Query: 210 EMLSGRQAWV 219
E+L+ ++ +
Sbjct: 249 ELLNMMKSHI 258
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 82/201 (40%), Gaps = 31/201 (15%)
Query: 90 EYAAGGTLGDLIEKCNG--NGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVA 147
EY GG+L D I + + E +++ + G+ +IH VH D+KP NI +
Sbjct: 89 EYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISR 148
Query: 148 TQ---------------SGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQ 192
T S K + KI DLG H R G +LA E + +
Sbjct: 149 TSIPNAASEEGDEDDWASNKVMFKIGDLG------HVTRISSPQVEEGDSRFLANEVLQE 202
Query: 193 HMQEAP-SDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEAR 251
+ P +DI+AL V+ +G + + DQ I + LP IP +S+E
Sbjct: 203 NYTHLPKADIFALALTVV-CAAGAEPL----PRNGDQWHEI--RQGRLPRIPQVLSQEFT 255
Query: 252 DFLRRCFVRKPAFRFTAEMLL 272
+ L+ P R +A L+
Sbjct: 256 ELLKVMIHPDPERRPSAMALV 276
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 34/208 (16%)
Query: 96 TLGDLIEKCNGNGLPEKDVRHFT-----RCILEGIGHIHDSGYVHCDVKPDNILLVATQS 150
L DL+E N + K + + R I G+ H+H +H D+KP NIL+ + S
Sbjct: 112 NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILV--STS 169
Query: 151 GKFVAK-----------IADLGVAKR----SRHCKRQKFDPSMRGTPLYLAPETVVQHMQ 195
+F A I+D G+ K+ + +PS GT + APE + + +
Sbjct: 170 SRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPS--GTSGWRAPELLEESTK 227
Query: 196 EAPS---DIWALGCVVLEMLS-GRQAW---VVKEDCSIDQLFSIIGDEHSLPEIPSRVSK 248
+ DI+++GCV +LS G+ + +E I +FS+ DE S ++
Sbjct: 228 RRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSL--DEMKCLHDRSLIA- 284
Query: 249 EARDFLRRCFVRKPAFRFTAEMLLDDPF 276
EA D + + P R TA +L P
Sbjct: 285 EATDLISQMIDHDPLKRPTAMKVLRHPL 312
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 134 VHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQH 193
H DVKP+NIL+ S A + D G+A + K + ++ GT Y APE +
Sbjct: 156 THRDVKPENILV----SADDFAYLVDFGIASATTDEKLTQLGNTV-GTLYYXAPERFSES 210
Query: 194 MQEAPSDIWALGCVVLEMLSGRQAW 218
+DI+AL CV+ E L+G +
Sbjct: 211 HATYRADIYALTCVLYECLTGSPPY 235
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 59/128 (46%), Gaps = 6/128 (4%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++ EY G+L + +G + V R + G+ ++ D GYVH D+ N+L+
Sbjct: 127 IVTEYMENGSLDTFLRTHDGQFTIMQLV-GMLRGVGAGMRYLSDLGYVHRDLAARNVLV- 184
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPL-YLAPETVVQHMQEAPSDIWALG 205
V K++D G+++ + P+ + APE + + SD+W+ G
Sbjct: 185 ---DSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFG 241
Query: 206 CVVLEMLS 213
V+ E+L+
Sbjct: 242 VVMWEVLA 249
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 74/167 (44%), Gaps = 13/167 (7%)
Query: 51 LQKEKEVFDNLNGCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLP 110
+ +E ++ L+ P+++ G + E A L++E A GG L + +P
Sbjct: 383 MMREAQIMHQLDN-PYIVRLIG--VCQAE----ALMLVMEMAGGGPLHKFLVG-KREEIP 434
Query: 111 EKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCK 170
+V + G+ ++ + +VH ++ N+LLV + AKI+D G++K
Sbjct: 435 VSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLV----NRHYAKISDFGLSKALGADD 490
Query: 171 RQKFDPSMRGTPL-YLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQ 216
S PL + APE + + SD+W+ G + E LS Q
Sbjct: 491 SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQ 537
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 69/160 (43%), Gaps = 12/160 (7%)
Query: 117 FTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDP 176
F+ + +G+ + +H D+ NILL + + KI D G+A+ ++
Sbjct: 173 FSYQVAKGMAFLASKNCIHRDLAARNILLTHGR----ITKICDFGLARHIKNDSNYVVKG 228
Query: 177 SMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGD 235
+ R ++APE++ + SD+W+ G + E+ S G + +D F +
Sbjct: 229 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY---PGMPVDSKFYKMIK 285
Query: 236 EHSLPEIPSRVSKEARDFLRRCF----VRKPAFRFTAEML 271
E P E D ++ C+ +++P F+ +++
Sbjct: 286 EGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 325
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 7/104 (6%)
Query: 113 DVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQ 172
+++ + +L G+ +IH + +H D+K N+L+ T+ G V K+AD G+A+ K
Sbjct: 126 EIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI--TRDG--VLKLADFGLARAFSLAKNS 181
Query: 173 KFDPSMRG--TPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLS 213
+ + T Y PE ++ P D+W GC++ EM +
Sbjct: 182 QPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 7/104 (6%)
Query: 113 DVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQ 172
+++ + +L G+ +IH + +H D+K N+L+ T+ G V K+AD G+A+ K
Sbjct: 126 EIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI--TRDG--VLKLADFGLARAFSLAKNS 181
Query: 173 KFDPSMRG--TPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLS 213
+ + T Y PE ++ P D+W GC++ EM +
Sbjct: 182 QPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 7/104 (6%)
Query: 113 DVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQ 172
+++ + +L G+ +IH + +H D+K N+L+ T+ G V K+AD G+A+ K
Sbjct: 126 EIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI--TRDG--VLKLADFGLARAFSLAKNS 181
Query: 173 KFDPSMRG--TPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLS 213
+ + T Y PE ++ P D+W GC++ EM +
Sbjct: 182 QPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 7/104 (6%)
Query: 113 DVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQ 172
+++ + +L G+ +IH + +H D+K N+L+ T+ G V K+AD G+A+ K
Sbjct: 125 EIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI--TRDG--VLKLADFGLARAFSLAKNS 180
Query: 173 KFDPSMRG--TPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLS 213
+ + T Y PE ++ P D+W GC++ EM +
Sbjct: 181 QPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 224
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 84/202 (41%), Gaps = 19/202 (9%)
Query: 12 RVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLECF 71
+ IG+G FG V + + N + + E V L V +
Sbjct: 27 QTIGKGEFGDVMLGDYRGNKVAVKCI-----KNDATAQAFLAEASVMTQLRHSNLV-QLL 80
Query: 72 GEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDS 131
G + + E G + ++ EY A G+L D + + L + F+ + E + ++ +
Sbjct: 81 G--VIVEEKGGLY--IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN 136
Query: 132 GYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVV 191
+VH D+ N+L+ S VAK++D G+ K + + P + APE +
Sbjct: 137 NFVHRDLAARNVLV----SEDNVAKVSDFGLTKEASSTQDTGKLPVK-----WTAPEALR 187
Query: 192 QHMQEAPSDIWALGCVVLEMLS 213
+ SD+W+ G ++ E+ S
Sbjct: 188 EKKFSTKSDVWSFGILLWEIYS 209
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 62/167 (37%), Gaps = 51/167 (30%)
Query: 94 GGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDS-GYVHCDVKPDNILLVATQ--- 149
G L I K N GLP V+ + +L+G+ ++H +H D+KP+NILL +
Sbjct: 128 GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYI 187
Query: 150 -----------------------------SGKFV-------------AKIADLGVAKRSR 167
+G F+ KIADLG A
Sbjct: 188 RRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNA---- 243
Query: 168 HCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLSG 214
C K T Y + E ++ P+DIW+ C+ E+ +G
Sbjct: 244 -CWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATG 289
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/272 (19%), Positives = 113/272 (41%), Gaps = 31/272 (11%)
Query: 6 TSWFRGRVIGQGSFGCVF--IAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVF----- 58
T + + +V+G G+FG V+ + P+ +P + + E +
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 71
Query: 59 DNLNGCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFT 118
DN + C + C + L+ + G L D + + N + + + ++
Sbjct: 72 DNPHVCRLLGICLTSTV----------QLITQLMPFGCLLDYVREHKDN-IGSQYLLNWC 120
Query: 119 RCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSM 178
I EG+ ++ D VH D+ N+L+ Q KI D G+AK +++
Sbjct: 121 VQIAEGMNYLEDRRLVHRDLAARNVLVKTPQH----VKITDFGLAKLLGAEEKEYHAEGG 176
Query: 179 RGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEH 237
+ ++A E+++ + SD+W+ G V E+++ G + + + ++ SI+
Sbjct: 177 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGE 233
Query: 238 SLPEIPSRVSKEARDFLRRCFV----RKPAFR 265
LP+ P + + + +C++ +P FR
Sbjct: 234 RLPQ-PPICTIDVYMIMVKCWMIDADSRPKFR 264
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/272 (19%), Positives = 113/272 (41%), Gaps = 31/272 (11%)
Query: 6 TSWFRGRVIGQGSFGCVF--IAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVF----- 58
T + + +V+G G+FG V+ + P+ +P + + E +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 59 DNLNGCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFT 118
DN + C + C + L+ + G L D + + N + + + ++
Sbjct: 77 DNPHVCRLLGICLTSTV----------QLITQLMPFGCLLDYVREHKDN-IGSQYLLNWC 125
Query: 119 RCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSM 178
I +G+ ++ D VH D+ N+L+ Q KI D G AK +++
Sbjct: 126 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH----VKITDFGRAKLLGAEEKEYHAEGG 181
Query: 179 RGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEH 237
+ ++A E+++ + SD+W+ G V E+++ G + + + ++ SI+
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGE 238
Query: 238 SLPEIPSRVSKEARDFLRRCFV----RKPAFR 265
LP+ P + + +R+C++ +P FR
Sbjct: 239 RLPQ-PPICTIDVYMIMRKCWMIDADSRPKFR 269
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 62/167 (37%), Gaps = 51/167 (30%)
Query: 94 GGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDS-GYVHCDVKPDNILLVATQ--- 149
G L I K N GLP V+ + +L+G+ ++H +H D+KP+NILL +
Sbjct: 112 GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYI 171
Query: 150 -----------------------------SGKFV-------------AKIADLGVAKRSR 167
+G F+ KIADLG A
Sbjct: 172 RRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNA---- 227
Query: 168 HCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLSG 214
C K T Y + E ++ P+DIW+ C+ E+ +G
Sbjct: 228 -CWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATG 273
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/272 (19%), Positives = 114/272 (41%), Gaps = 31/272 (11%)
Query: 6 TSWFRGRVIGQGSFGCVF--IAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVF----- 58
T + + +V+G G+FG V+ + P+ +P + + E +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 59 DNLNGCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFT 118
DN + C + C + L+++ G L D + + N + + + ++
Sbjct: 76 DNPHVCRLLGICLTSTV----------QLIMQLMPFGXLLDYVREHKDN-IGSQYLLNWC 124
Query: 119 RCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSM 178
I +G+ ++ D VH D+ N+L+ Q KI D G+AK +++
Sbjct: 125 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH----VKITDFGLAKLLGAEEKEYHAEGG 180
Query: 179 RGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEH 237
+ ++A E+++ + SD+W+ G V E+++ G + + + ++ SI+
Sbjct: 181 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGE 237
Query: 238 SLPEIPSRVSKEARDFLRRCFV----RKPAFR 265
LP+ P + + + +C++ +P FR
Sbjct: 238 RLPQ-PPICTIDVYMIMVKCWMIDADSRPKFR 268
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 84/202 (41%), Gaps = 19/202 (9%)
Query: 12 RVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLECF 71
+ IG+G FG V + + N + + E V L V +
Sbjct: 12 QTIGKGEFGDVMLGDYRGNKVAVKCI-----KNDATAQAFLAEASVMTQLRHSNLV-QLL 65
Query: 72 GEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDS 131
G + + E G + ++ EY A G+L D + + L + F+ + E + ++ +
Sbjct: 66 G--VIVEEKGGLY--IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN 121
Query: 132 GYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVV 191
+VH D+ N+L+ S VAK++D G+ K + + P + APE +
Sbjct: 122 NFVHRDLAARNVLV----SEDNVAKVSDFGLTKEASSTQDTGKLPVK-----WTAPEALR 172
Query: 192 QHMQEAPSDIWALGCVVLEMLS 213
+ SD+W+ G ++ E+ S
Sbjct: 173 EKKFSTKSDVWSFGILLWEIYS 194
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 69/160 (43%), Gaps = 12/160 (7%)
Query: 117 FTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDP 176
F+ + +G+ + +H D+ NILL + + KI D G+A+ ++
Sbjct: 173 FSYQVAKGMAFLASKNCIHRDLAARNILLTHGR----ITKICDFGLARDIKNDSNYVVKG 228
Query: 177 SMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGD 235
+ R ++APE++ + SD+W+ G + E+ S G + +D F +
Sbjct: 229 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY---PGMPVDSKFYKMIK 285
Query: 236 EHSLPEIPSRVSKEARDFLRRCF----VRKPAFRFTAEML 271
E P E D ++ C+ +++P F+ +++
Sbjct: 286 EGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 325
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 84/202 (41%), Gaps = 19/202 (9%)
Query: 12 RVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLECF 71
+ IG+G FG V + + N + + E V L V +
Sbjct: 199 QTIGKGEFGDVMLGDYRGNKVAVKCI-----KNDATAQAFLAEASVMTQLRHSNLV-QLL 252
Query: 72 GEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDS 131
G + + E G + ++ EY A G+L D + + L + F+ + E + ++ +
Sbjct: 253 G--VIVEEKGGLY--IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN 308
Query: 132 GYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVV 191
+VH D+ N+L+ S VAK++D G+ K + + P + APE +
Sbjct: 309 NFVHRDLAARNVLV----SEDNVAKVSDFGLTKEASSTQDTGKLPVK-----WTAPEALR 359
Query: 192 QHMQEAPSDIWALGCVVLEMLS 213
+ SD+W+ G ++ E+ S
Sbjct: 360 EKKFSTKSDVWSFGILLWEIYS 381
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 69/160 (43%), Gaps = 12/160 (7%)
Query: 117 FTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDP 176
F+ + +G+ + +H D+ NILL + + KI D G+A+ ++
Sbjct: 150 FSYQVAKGMAFLASKNCIHRDLAARNILLTHGR----ITKICDFGLARDIKNDSNYVVKG 205
Query: 177 SMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGD 235
+ R ++APE++ + SD+W+ G + E+ S G + +D F +
Sbjct: 206 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY---PGMPVDSKFYKMIK 262
Query: 236 EHSLPEIPSRVSKEARDFLRRCF----VRKPAFRFTAEML 271
E P E D ++ C+ +++P F+ +++
Sbjct: 263 EGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 302
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/272 (19%), Positives = 114/272 (41%), Gaps = 31/272 (11%)
Query: 6 TSWFRGRVIGQGSFGCVF--IAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVF----- 58
T + + +V+G G+FG V+ + P+ +P + + E +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 59 DNLNGCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFT 118
DN + C + C + L+++ G L D + + N + + + ++
Sbjct: 77 DNPHVCRLLGICLTSTV----------QLIMQLMPFGCLLDYVREHKDN-IGSQYLLNWC 125
Query: 119 RCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSM 178
I +G+ ++ D VH D+ N+L+ Q KI D G+AK +++
Sbjct: 126 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH----VKITDFGLAKLLGAEEKEYHAEGG 181
Query: 179 RGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEH 237
+ ++A E+++ + SD+W+ G V E+++ G + + + ++ SI+
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGE 238
Query: 238 SLPEIPSRVSKEARDFLRRCFV----RKPAFR 265
LP+ P + + + +C++ +P FR
Sbjct: 239 RLPQ-PPICTIDVYMIMVKCWMIDADSRPKFR 269
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 82/183 (44%), Gaps = 12/183 (6%)
Query: 85 YNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNIL 144
+ ++ E+ G L D + +CN + + + I + ++ ++H D+ N L
Sbjct: 85 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 144
Query: 145 LVATQSGKFVAKIADLGVAKRSRHCKRQKFD-PSMRGTPL-YLAPETVVQHMQEAPSDIW 202
+ + K+AD G+ SR + P+ P+ + APE++ + SD+W
Sbjct: 145 VGENH----LVKVADFGL---SRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVW 197
Query: 203 ALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKP 262
A G ++ E+ + + D S Q++ ++ ++ + E P ++ + +R C+ P
Sbjct: 198 AFGVLLWEIATYGMSPYPGIDLS--QVYELLEKDYRM-ERPEGCPEKVYELMRACWQWNP 254
Query: 263 AFR 265
+ R
Sbjct: 255 SDR 257
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/272 (19%), Positives = 114/272 (41%), Gaps = 31/272 (11%)
Query: 6 TSWFRGRVIGQGSFGCVF--IAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVF----- 58
T + + +V+G G+FG V+ + P+ +P + + E +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 59 DNLNGCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFT 118
DN + C + C + L+++ G L D + + N + + + ++
Sbjct: 79 DNPHVCRLLGICLTSTV----------QLIMQLMPFGCLLDYVREHKDN-IGSQYLLNWC 127
Query: 119 RCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSM 178
I +G+ ++ D VH D+ N+L+ Q KI D G+AK +++
Sbjct: 128 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH----VKITDFGLAKLLGAEEKEYHAEGG 183
Query: 179 RGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEH 237
+ ++A E+++ + SD+W+ G V E+++ G + + + ++ SI+
Sbjct: 184 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGE 240
Query: 238 SLPEIPSRVSKEARDFLRRCFV----RKPAFR 265
LP+ P + + + +C++ +P FR
Sbjct: 241 RLPQ-PPICTIDVYMIMVKCWMIDADSRPKFR 271
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/272 (19%), Positives = 114/272 (41%), Gaps = 31/272 (11%)
Query: 6 TSWFRGRVIGQGSFGCVF--IAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVF----- 58
T + + +V+G G+FG V+ + P+ +P + + E +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 59 DNLNGCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFT 118
DN + C + C + L+++ G L D + + N + + + ++
Sbjct: 78 DNPHVCRLLGICLTSTV----------QLIMQLMPFGCLLDYVREHKDN-IGSQYLLNWC 126
Query: 119 RCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSM 178
I +G+ ++ D VH D+ N+L+ Q KI D G+AK +++
Sbjct: 127 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH----VKITDFGLAKLLGAEEKEYHAEGG 182
Query: 179 RGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEH 237
+ ++A E+++ + SD+W+ G V E+++ G + + + ++ SI+
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGE 239
Query: 238 SLPEIPSRVSKEARDFLRRCFV----RKPAFR 265
LP+ P + + + +C++ +P FR
Sbjct: 240 RLPQ-PPICTIDVYMIMVKCWMIDADSRPKFR 270
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 69/160 (43%), Gaps = 12/160 (7%)
Query: 117 FTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDP 176
F+ + +G+ + +H D+ NILL + + KI D G+A+ ++
Sbjct: 166 FSYQVAKGMAFLASKNCIHRDLAARNILLTHGR----ITKICDFGLARDIKNDSNYVVKG 221
Query: 177 SMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGD 235
+ R ++APE++ + SD+W+ G + E+ S G + +D F +
Sbjct: 222 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY---PGMPVDSKFYKMIK 278
Query: 236 EHSLPEIPSRVSKEARDFLRRCF----VRKPAFRFTAEML 271
E P E D ++ C+ +++P F+ +++
Sbjct: 279 EGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 318
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/272 (19%), Positives = 114/272 (41%), Gaps = 31/272 (11%)
Query: 6 TSWFRGRVIGQGSFGCVF--IAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVF----- 58
T + + +V+G G+FG V+ + P+ +P + + E +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 59 DNLNGCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFT 118
DN + C + C + L+++ G L D + + N + + + ++
Sbjct: 76 DNPHVCRLLGICLTSTV----------QLIMQLMPFGCLLDYVREHKDN-IGSQYLLNWC 124
Query: 119 RCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSM 178
I +G+ ++ D VH D+ N+L+ Q KI D G+AK +++
Sbjct: 125 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH----VKITDFGLAKLLGAEEKEYHAEGG 180
Query: 179 RGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEH 237
+ ++A E+++ + SD+W+ G V E+++ G + + + ++ SI+
Sbjct: 181 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGE 237
Query: 238 SLPEIPSRVSKEARDFLRRCFV----RKPAFR 265
LP+ P + + + +C++ +P FR
Sbjct: 238 RLPQ-PPICTIDVYMIMVKCWMIDADSRPKFR 268
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 83/201 (41%), Gaps = 21/201 (10%)
Query: 87 LLLEYAAGGTLGDLI-----EKCNGNGLPEKDVRHFTRC---ILEGIGHIHDSGYVHCDV 138
+++E A G L + E N G P ++ + I +G+ +++ +VH D+
Sbjct: 97 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDL 156
Query: 139 KPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAP 198
N ++ + F KI D G+ + + ++APE++ +
Sbjct: 157 AARNCMV----AHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTS 212
Query: 199 SDIWALGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRC 257
SD+W+ G V+ E+ S Q + + S +Q+ + D L + P + D +R C
Sbjct: 213 SDMWSFGVVLWEITSLAEQPY---QGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMC 268
Query: 258 FVRKPAFRFT----AEMLLDD 274
+ P R T +L DD
Sbjct: 269 WQFNPKMRPTFLEIVNLLKDD 289
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 83/201 (41%), Gaps = 21/201 (10%)
Query: 87 LLLEYAAGGTLGDLI-----EKCNGNGLPEKDVRHFTRC---ILEGIGHIHDSGYVHCDV 138
+++E A G L + E N G P ++ + I +G+ +++ +VH D+
Sbjct: 94 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDL 153
Query: 139 KPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAP 198
N ++ + F KI D G+ + + ++APE++ +
Sbjct: 154 AARNCMV----AHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTS 209
Query: 199 SDIWALGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRC 257
SD+W+ G V+ E+ S Q + + S +Q+ + D L + P + D +R C
Sbjct: 210 SDMWSFGVVLWEITSLAEQPY---QGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMC 265
Query: 258 FVRKPAFRFT----AEMLLDD 274
+ P R T +L DD
Sbjct: 266 WQFNPKMRPTFLEIVNLLKDD 286
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 82/183 (44%), Gaps = 12/183 (6%)
Query: 85 YNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNIL 144
+ ++ E+ G L D + +CN + + + I + ++ ++H D+ N L
Sbjct: 86 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 145
Query: 145 LVATQSGKFVAKIADLGVAKRSRHCKRQKFD-PSMRGTPL-YLAPETVVQHMQEAPSDIW 202
+ + K+AD G+ SR + P+ P+ + APE++ + SD+W
Sbjct: 146 VGENH----LVKVADFGL---SRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVW 198
Query: 203 ALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKP 262
A G ++ E+ + + D S Q++ ++ ++ + E P ++ + +R C+ P
Sbjct: 199 AFGVLLWEIATYGMSPYPGIDLS--QVYELLEKDYRM-ERPEGCPEKVYELMRACWQWNP 255
Query: 263 AFR 265
+ R
Sbjct: 256 SDR 258
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 69/160 (43%), Gaps = 12/160 (7%)
Query: 117 FTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDP 176
F+ + +G+ + +H D+ NILL + + KI D G+A+ ++
Sbjct: 168 FSYQVAKGMAFLASKNCIHRDLAARNILLTHGR----ITKICDFGLARDIKNDSNYVVKG 223
Query: 177 SMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGD 235
+ R ++APE++ + SD+W+ G + E+ S G + +D F +
Sbjct: 224 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY---PGMPVDSKFYKMIK 280
Query: 236 EHSLPEIPSRVSKEARDFLRRCF----VRKPAFRFTAEML 271
E P E D ++ C+ +++P F+ +++
Sbjct: 281 EGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 320
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/272 (19%), Positives = 114/272 (41%), Gaps = 31/272 (11%)
Query: 6 TSWFRGRVIGQGSFGCVF--IAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVF----- 58
T + + +V+G G+FG V+ + P+ +P + + E +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 59 DNLNGCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFT 118
DN + C + C + L+++ G L D + + N + + + ++
Sbjct: 75 DNPHVCRLLGICLTSTV----------QLIMQLMPFGCLLDYVREHKDN-IGSQYLLNWC 123
Query: 119 RCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSM 178
I +G+ ++ D VH D+ N+L+ Q KI D G+AK +++
Sbjct: 124 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH----VKITDFGLAKLLGAEEKEYHAEGG 179
Query: 179 RGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEH 237
+ ++A E+++ + SD+W+ G V E+++ G + + + ++ SI+
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGE 236
Query: 238 SLPEIPSRVSKEARDFLRRCFV----RKPAFR 265
LP+ P + + + +C++ +P FR
Sbjct: 237 RLPQ-PPICTIDVYMIMVKCWMIDADSRPKFR 267
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 119 RCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSM 178
R I G+ ++ D G VH D+ NIL+ + V K++D G+++ +
Sbjct: 154 RGIASGMKYLSDMGAVHRDLAARNILI----NSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 179 RGTPL-YLAPETVVQHMQEAPSDIWALGCVVLEMLS 213
P+ + +PE + + SD+W+ G V+ E++S
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 84/202 (41%), Gaps = 19/202 (9%)
Query: 12 RVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFVLECF 71
+ IG+G FG V + + N + + E V L V +
Sbjct: 18 QTIGKGEFGDVMLGDYRGNKVAVKCI-----KNDATAQAFLAEASVMTQLRHSNLV-QLL 71
Query: 72 GEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDS 131
G + + E G + ++ EY A G+L D + + L + F+ + E + ++ +
Sbjct: 72 G--VIVEEKGGLY--IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN 127
Query: 132 GYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVV 191
+VH D+ N+L+ S VAK++D G+ K + + P + APE +
Sbjct: 128 NFVHRDLAARNVLV----SEDNVAKVSDFGLTKEASSTQDTGKLPVK-----WTAPEALR 178
Query: 192 QHMQEAPSDIWALGCVVLEMLS 213
+ SD+W+ G ++ E+ S
Sbjct: 179 EAAFSTKSDVWSFGILLWEIYS 200
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 83/206 (40%), Gaps = 40/206 (19%)
Query: 109 LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
L + D+R++ +L+ + + H G +H DVKP N+ ++ + K ++ D G+A+
Sbjct: 143 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNV-MIDHELRKL--RLIDWGLAEFYHP 199
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEML--------------- 212
K + R + PE +V S D+W+LGC+ M+
Sbjct: 200 GKEYNVRVASR---YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQ 256
Query: 213 ----------SGRQAWVVKEDCSID-QLFSIIGDEHSLPEIP-------SRVSKEARDFL 254
G A++ K +D QL +++G P + VS EA DFL
Sbjct: 257 LVKIAKVLGTDGLNAYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFL 316
Query: 255 RRCFVRKPAFRFTAEMLLDDPFVKGV 280
+ R TA + P+ + V
Sbjct: 317 DKLLRYDHQERLTALEAMTHPYFQQV 342
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 83/201 (41%), Gaps = 21/201 (10%)
Query: 87 LLLEYAAGGTLGDLI-----EKCNGNGLPEKDVRHFTRC---ILEGIGHIHDSGYVHCDV 138
+++E A G L + E N G P ++ + I +G+ +++ +VH D+
Sbjct: 97 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDL 156
Query: 139 KPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAP 198
N ++ + F KI D G+ + + ++APE++ +
Sbjct: 157 AARNCMV----AHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTS 212
Query: 199 SDIWALGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRC 257
SD+W+ G V+ E+ S Q + + S +Q+ + D L + P + D +R C
Sbjct: 213 SDMWSFGVVLWEITSLAEQPY---QGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMC 268
Query: 258 FVRKPAFRFT----AEMLLDD 274
+ P R T +L DD
Sbjct: 269 WQFNPKMRPTFLEIVNLLKDD 289
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 83/201 (41%), Gaps = 21/201 (10%)
Query: 87 LLLEYAAGGTLGDLI-----EKCNGNGLPEKDVRHFTRC---ILEGIGHIHDSGYVHCDV 138
+++E A G L + E N G P ++ + I +G+ +++ +VH D+
Sbjct: 97 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDL 156
Query: 139 KPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAP 198
N ++ + F KI D G+ + + ++APE++ +
Sbjct: 157 AARNCMV----AHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTS 212
Query: 199 SDIWALGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRC 257
SD+W+ G V+ E+ S Q + + S +Q+ + D L + P + D +R C
Sbjct: 213 SDMWSFGVVLWEITSLAEQPY---QGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMC 268
Query: 258 FVRKPAFRFT----AEMLLDD 274
+ P R T +L DD
Sbjct: 269 WQFNPKMRPTFLEIVNLLKDD 289
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 83/201 (41%), Gaps = 21/201 (10%)
Query: 87 LLLEYAAGGTLGDLI-----EKCNGNGLPEKDVRHFTRC---ILEGIGHIHDSGYVHCDV 138
+++E A G L + E N G P ++ + I +G+ +++ +VH D+
Sbjct: 97 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDL 156
Query: 139 KPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAP 198
N ++ + F KI D G+ + + ++APE++ +
Sbjct: 157 AARNCMV----AHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTS 212
Query: 199 SDIWALGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRC 257
SD+W+ G V+ E+ S Q + + S +Q+ + D L + P + D +R C
Sbjct: 213 SDMWSFGVVLWEITSLAEQPY---QGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMC 268
Query: 258 FVRKPAFRFT----AEMLLDD 274
+ P R T +L DD
Sbjct: 269 WQFNPNMRPTFLEIVNLLKDD 289
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 8/125 (6%)
Query: 109 LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
L + D+R++ +L+ + + H G +H DVKP N+ ++ + K ++ D G+A+
Sbjct: 124 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNV-MIDHELRKL--RLIDWGLAEFYHP 180
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSID 227
K + R + PE +V S D+W+LGC+ M+ ++ + D D
Sbjct: 181 GKEYNVRVASR---YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNH-D 236
Query: 228 QLFSI 232
QL I
Sbjct: 237 QLVKI 241
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/181 (18%), Positives = 79/181 (43%), Gaps = 8/181 (4%)
Query: 85 YNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNIL 144
+ +++E+ G L D + +CN + + + I + ++ ++H D+ N L
Sbjct: 84 FYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 143
Query: 145 LVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWAL 204
+ + K+AD G++ R + + APE++ + SD+WA
Sbjct: 144 VGENH----LVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 198
Query: 205 GCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAF 264
G ++ E+ + + D S Q++ ++ ++ + E P ++ + +R C+ P+
Sbjct: 199 GVLLWEIATYGMSPYPGIDLS--QVYELLEKDYRM-ERPEGCPEKVYELMRACWQWNPSD 255
Query: 265 R 265
R
Sbjct: 256 R 256
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/181 (18%), Positives = 79/181 (43%), Gaps = 8/181 (4%)
Query: 85 YNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNIL 144
+ +++E+ G L D + +CN + + + I + ++ ++H D+ N L
Sbjct: 84 FYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 143
Query: 145 LVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWAL 204
+ + K+AD G++ R + + APE++ + SD+WA
Sbjct: 144 VGENH----LVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 198
Query: 205 GCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAF 264
G ++ E+ + + D S Q++ ++ ++ + E P ++ + +R C+ P+
Sbjct: 199 GVLLWEIATYGMSPYPGIDLS--QVYELLEKDYRM-ERPEGCPEKVYELMRACWQWNPSD 255
Query: 265 R 265
R
Sbjct: 256 R 256
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 83/201 (41%), Gaps = 21/201 (10%)
Query: 87 LLLEYAAGGTLGDLI-----EKCNGNGLPEKDVRHFTRC---ILEGIGHIHDSGYVHCDV 138
+++E A G L + E N G P ++ + I +G+ +++ +VH D+
Sbjct: 96 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDL 155
Query: 139 KPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAP 198
N ++ + F KI D G+ + + ++APE++ +
Sbjct: 156 AARNCMV----AHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTS 211
Query: 199 SDIWALGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRC 257
SD+W+ G V+ E+ S Q + + S +Q+ + D L + P + D +R C
Sbjct: 212 SDMWSFGVVLWEITSLAEQPY---QGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMC 267
Query: 258 FVRKPAFRFT----AEMLLDD 274
+ P R T +L DD
Sbjct: 268 WQFNPKMRPTFLEIVNLLKDD 288
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 8/125 (6%)
Query: 109 LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
L + D+R++ +L+ + + H G +H DVKP N+ ++ + K ++ D G+A+
Sbjct: 123 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNV-MIDHELRKL--RLIDWGLAEFYHP 179
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSID 227
K + R + PE +V S D+W+LGC+ M+ ++ + D D
Sbjct: 180 GKEYNVRVASR---YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNH-D 235
Query: 228 QLFSI 232
QL I
Sbjct: 236 QLVKI 240
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/181 (20%), Positives = 76/181 (41%), Gaps = 8/181 (4%)
Query: 85 YNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNIL 144
+ ++ EY G L D + +CN + + + I + ++ ++H D+ N L
Sbjct: 103 FYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 162
Query: 145 LVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWAL 204
+ V K+AD G++ R + + APE++ + SD+WA
Sbjct: 163 V----GENHVVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAF 217
Query: 205 GCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAF 264
G ++ E+ + + D S Q++ ++ + + E P + + +R C+ PA
Sbjct: 218 GVLLWEIATYGMSPYPGIDLS--QVYDLLEKGYRM-EQPEGCPPKVYELMRACWKWSPAD 274
Query: 265 R 265
R
Sbjct: 275 R 275
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 8/125 (6%)
Query: 109 LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
L + D+R++ +L+ + + H G +H DVKP N+ ++ + K ++ D G+A+
Sbjct: 123 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNV-MIDHELRKL--RLIDWGLAEFYHP 179
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSID 227
K + R + PE +V S D+W+LGC+ M+ ++ + D D
Sbjct: 180 GKEYNVRVASR---YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNH-D 235
Query: 228 QLFSI 232
QL I
Sbjct: 236 QLVKI 240
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 8/125 (6%)
Query: 109 LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
L + D+R++ +L+ + + H G +H DVKP N+ ++ + K ++ D G+A+
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNV-MIDHELRKL--RLIDWGLAEFYHP 178
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSID 227
K + R + PE +V S D+W+LGC+ M+ ++ + D D
Sbjct: 179 GKEYNVRVASR---YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNH-D 234
Query: 228 QLFSI 232
QL I
Sbjct: 235 QLVKI 239
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 8/125 (6%)
Query: 109 LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
L + D+R++ +L+ + + H G +H DVKP N+ ++ + K ++ D G+A+
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNV-MIDHELRKL--RLIDWGLAEFYHP 178
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSID 227
K + R + PE +V S D+W+LGC+ M+ ++ + D D
Sbjct: 179 GKEYNVRVASR---YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNH-D 234
Query: 228 QLFSI 232
QL I
Sbjct: 235 QLVKI 239
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 90/218 (41%), Gaps = 32/218 (14%)
Query: 13 VIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPF--VLEC 70
V +G FGCV+ A+ L + Q E EV+ +L G +L+
Sbjct: 31 VKARGRFGCVWKAQ------LLNEYVAVKIFPIQDKQSWQNEYEVY-SLPGMKHENILQF 83
Query: 71 FGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHD 130
G E G + ++ L+ + G+L D ++ N + ++ H + G+ ++H+
Sbjct: 84 IGAE-KRGTSVDVDLWLITAFHEKGSLSDFLK---ANVVSWNELCHIAETMARGLAYLHE 139
Query: 131 S----------GYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG 180
H D+K N+LL A IAD G+A + K G
Sbjct: 140 DIPGLKDGHKPAISHRDIKSKNVLL----KNNLTACIADFGLALKFEAGKSAGDTHGQVG 195
Query: 181 TPLYLAPETV---VQHMQEA--PSDIWALGCVVLEMLS 213
T Y+APE + + ++A D++A+G V+ E+ S
Sbjct: 196 TRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 8/125 (6%)
Query: 109 LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
L + D+R++ +L+ + + H G +H DVKP N+ ++ + K ++ D G+A+
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNV-MIDHELRKL--RLIDWGLAEFYHP 178
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSID 227
K + R + PE +V S D+W+LGC+ M+ ++ + D D
Sbjct: 179 GKEYNVRVASR---YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNH-D 234
Query: 228 QLFSI 232
QL I
Sbjct: 235 QLVKI 239
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 8/125 (6%)
Query: 109 LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
L + D+R++ +L+ + + H G +H DVKP N+ ++ + K ++ D G+A+
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNV-MIDHELRKL--RLIDWGLAEFYHP 178
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSID 227
K + R + PE +V S D+W+LGC+ M+ ++ + D D
Sbjct: 179 GKEYNVRVASR---YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNH-D 234
Query: 228 QLFSI 232
QL I
Sbjct: 235 QLVKI 239
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/184 (19%), Positives = 80/184 (43%), Gaps = 8/184 (4%)
Query: 82 EMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPD 141
E + +++E+ G L D + +CN + + + I + ++ ++H D+
Sbjct: 82 EPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 141
Query: 142 NILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDI 201
N L+ + K+AD G++ R + + APE++ + SD+
Sbjct: 142 NCLVGENH----LVKVADFGLS-RLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 196
Query: 202 WALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRK 261
WA G ++ E+ + + D S Q++ ++ ++ + E P ++ + +R C+
Sbjct: 197 WAFGVLLWEIATYGMSPYPGIDLS--QVYELLEKDYRM-ERPEGCPEKVYELMRACWQWN 253
Query: 262 PAFR 265
P+ R
Sbjct: 254 PSDR 257
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 8/125 (6%)
Query: 109 LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
L + D+R++ +L+ + + H G +H DVKP N+ ++ + K ++ D G+A+
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNV-MIDHELRKL--RLIDWGLAEFYHP 178
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSID 227
K + R + PE +V S D+W+LGC+ M+ ++ + D D
Sbjct: 179 GKEYNVRVASR---YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNH-D 234
Query: 228 QLFSI 232
QL I
Sbjct: 235 QLVKI 239
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 8/125 (6%)
Query: 109 LPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRH 168
L + D+R++ +L+ + + H G +H DVKP N+ ++ + K ++ D G+A+
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNV-MIDHELRKL--RLIDWGLAEFYHP 178
Query: 169 CKRQKFDPSMRGTPLYLAPETVVQHMQEAPS-DIWALGCVVLEMLSGRQAWVVKEDCSID 227
K + R + PE +V S D+W+LGC+ M+ ++ + D D
Sbjct: 179 GKEYNVRVASR---YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNH-D 234
Query: 228 QLFSI 232
QL I
Sbjct: 235 QLVKI 239
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/184 (19%), Positives = 80/184 (43%), Gaps = 8/184 (4%)
Query: 82 EMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPD 141
E + +++E+ G L D + +CN + + + I + ++ ++H D+
Sbjct: 86 EPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 145
Query: 142 NILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDI 201
N L+ + K+AD G++ R + + APE++ + SD+
Sbjct: 146 NCLV----GENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 202 WALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRK 261
WA G ++ E+ + + D S Q++ ++ ++ + E P ++ + +R C+
Sbjct: 201 WAFGVLLWEIATYGMSPYPGIDLS--QVYELLEKDYRM-ERPEGCPEKVYELMRACWQWN 257
Query: 262 PAFR 265
P+ R
Sbjct: 258 PSDR 261
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 117/289 (40%), Gaps = 30/289 (10%)
Query: 12 RVIGQGSFGCVF----IAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNLNGCPFV 67
RVIG+G FG V+ I + ++ + L +E + LN P V
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFL-REGLLMRGLNH-PNV 84
Query: 68 LECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGH 127
L G I + G ++LL Y G L I N KD+ F + G+ +
Sbjct: 85 LALIG--IMLPPEG--LPHVLLPYMCHGDLLQFIRSPQRNP-TVKDLISFGLQVARGMEY 139
Query: 128 IHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAK----RSRHCKRQKFDPSMRGTPL 183
+ + +VH D+ N +L F K+AD G+A+ R + +Q R
Sbjct: 140 LAEQKFVHRDLAARNCML----DESFTVKVADFGLARDILDREYYSVQQH--RHARLPVK 193
Query: 184 YLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIP 243
+ A E++ + SD+W+ G ++ E+L+ R A + D L + LP+ P
Sbjct: 194 WTALESLQTYRFTTKSDVWSFGVLLWELLT-RGAPPYRHIDPFD-LTHFLAQGRRLPQ-P 250
Query: 244 SRVSKEARDFLRRCFVRKPAFRFTAEMLLDDPFVKGVDEELSRELEGDY 292
+++C+ PA R T +L+ G E++ L GD+
Sbjct: 251 EYCPDSLYQVMQQCWEADPAVRPTFRVLV------GEVEQIVSALLGDH 293
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/272 (19%), Positives = 113/272 (41%), Gaps = 31/272 (11%)
Query: 6 TSWFRGRVIGQGSFGCVF--IAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVF----- 58
T + + +V+G G+FG V+ + P+ +P + + E +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 59 DNLNGCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFT 118
DN + C + C + L+ + G L D + + N + + + ++
Sbjct: 75 DNPHVCRLLGICLTSTV----------QLITQLMPFGXLLDYVREHKDN-IGSQYLLNWC 123
Query: 119 RCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSM 178
I +G+ ++ D VH D+ N+L+ Q KI D G+AK +++
Sbjct: 124 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH----VKITDFGLAKLLGAEEKEYHAEGG 179
Query: 179 RGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEH 237
+ ++A E+++ + SD+W+ G V E+++ G + + + ++ SI+
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGE 236
Query: 238 SLPEIPSRVSKEARDFLRRCFV----RKPAFR 265
LP+ P + + + +C++ +P FR
Sbjct: 237 RLPQ-PPICTIDVYMIMVKCWMIDADSRPKFR 267
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 48/111 (43%), Gaps = 10/111 (9%)
Query: 114 VRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQ-SGKFVAKIA---------DLGVA 163
+R I + + +H + H D+KP+NIL V + + + KI D+ V
Sbjct: 120 IRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVV 179
Query: 164 KRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLSG 214
+ ++ Y APE ++ P D+W++GC+++E G
Sbjct: 180 DFGSATYDDEHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/272 (19%), Positives = 113/272 (41%), Gaps = 31/272 (11%)
Query: 6 TSWFRGRVIGQGSFGCVF--IAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVF----- 58
T + + +V+G G+FG V+ + P+ +P + + E +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 59 DNLNGCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFT 118
DN + C + C + L+ + G L D + + N + + + ++
Sbjct: 77 DNPHVCRLLGICLTSTV----------QLITQLMPFGCLLDYVREHKDN-IGSQYLLNWC 125
Query: 119 RCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSM 178
I +G+ ++ D VH D+ N+L+ Q KI D G+AK +++
Sbjct: 126 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH----VKITDFGLAKLLGAEEKEYHAEGG 181
Query: 179 RGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEH 237
+ ++A E+++ + SD+W+ G V E+++ G + + + ++ SI+
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGE 238
Query: 238 SLPEIPSRVSKEARDFLRRCFV----RKPAFR 265
LP+ P + + + +C++ +P FR
Sbjct: 239 RLPQ-PPICTIDVYMIMVKCWMIDADSRPKFR 269
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/272 (19%), Positives = 113/272 (41%), Gaps = 31/272 (11%)
Query: 6 TSWFRGRVIGQGSFGCVF--IAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVF----- 58
T + + +V+G G+FG V+ + P+ +P + + E +
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 99
Query: 59 DNLNGCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFT 118
DN + C + C + L+ + G L D + + N + + + ++
Sbjct: 100 DNPHVCRLLGICLTSTV----------QLITQLMPFGCLLDYVREHKDN-IGSQYLLNWC 148
Query: 119 RCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSM 178
I +G+ ++ D VH D+ N+L+ Q KI D G+AK +++
Sbjct: 149 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH----VKITDFGLAKLLGAEEKEYHAEGG 204
Query: 179 RGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEH 237
+ ++A E+++ + SD+W+ G V E+++ G + + + ++ SI+
Sbjct: 205 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGE 261
Query: 238 SLPEIPSRVSKEARDFLRRCFV----RKPAFR 265
LP+ P + + + +C++ +P FR
Sbjct: 262 RLPQ-PPICTIDVYMIMVKCWMIDADSRPKFR 292
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/272 (19%), Positives = 113/272 (41%), Gaps = 31/272 (11%)
Query: 6 TSWFRGRVIGQGSFGCVF--IAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVF----- 58
T + + +V+G G+FG V+ + P+ +P + + E +
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 80
Query: 59 DNLNGCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFT 118
DN + C + C + L+ + G L D + + N + + + ++
Sbjct: 81 DNPHVCRLLGICLTSTV----------QLITQLMPFGCLLDYVREHKDN-IGSQYLLNWC 129
Query: 119 RCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSM 178
I +G+ ++ D VH D+ N+L+ Q KI D G+AK +++
Sbjct: 130 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH----VKITDFGLAKLLGAEEKEYHAEGG 185
Query: 179 RGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEH 237
+ ++A E+++ + SD+W+ G V E+++ G + + + ++ SI+
Sbjct: 186 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGE 242
Query: 238 SLPEIPSRVSKEARDFLRRCFV----RKPAFR 265
LP+ P + + + +C++ +P FR
Sbjct: 243 RLPQ-PPICTIDVYMIMVKCWMIDADSRPKFR 273
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/272 (19%), Positives = 113/272 (41%), Gaps = 31/272 (11%)
Query: 6 TSWFRGRVIGQGSFGCVF--IAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVF----- 58
T + + +V+G G+FG V+ + P+ +P + + E +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 59 DNLNGCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFT 118
DN + C + C + L+ + G L D + + N + + + ++
Sbjct: 78 DNPHVCRLLGICLTSTV----------QLITQLMPFGCLLDYVREHKDN-IGSQYLLNWC 126
Query: 119 RCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSM 178
I +G+ ++ D VH D+ N+L+ Q KI D G+AK +++
Sbjct: 127 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH----VKITDFGLAKLLGAEEKEYHAEGG 182
Query: 179 RGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEH 237
+ ++A E+++ + SD+W+ G V E+++ G + + + ++ SI+
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGE 239
Query: 238 SLPEIPSRVSKEARDFLRRCFV----RKPAFR 265
LP+ P + + + +C++ +P FR
Sbjct: 240 RLPQ-PPICTIDVYMIMVKCWMIDADSRPKFR 270
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 14/107 (13%)
Query: 116 HFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLG-VAKRSRHCKRQKF 174
H I E + +H G +H D+KP NI V K+ D G V + + Q
Sbjct: 122 HIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDD----VVKVGDFGLVTAMDQDEEEQTV 177
Query: 175 DPSMR---------GTPLYLAPETVVQHMQEAPSDIWALGCVVLEML 212
M GT LY++PE + + DI++LG ++ E+L
Sbjct: 178 LTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/181 (18%), Positives = 79/181 (43%), Gaps = 8/181 (4%)
Query: 85 YNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNIL 144
+ +++E+ G L D + +CN + + + I + ++ ++H D+ N L
Sbjct: 82 FYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 141
Query: 145 LVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWAL 204
+ + K+AD G++ R + + APE++ + SD+WA
Sbjct: 142 VGENH----LVKVADFGLS-RLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 196
Query: 205 GCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAF 264
G ++ E+ + + D S Q++ ++ ++ + E P ++ + +R C+ P+
Sbjct: 197 GVLLWEIATYGMSPYPGIDPS--QVYELLEKDYRM-ERPEGCPEKVYELMRACWQWNPSD 253
Query: 265 R 265
R
Sbjct: 254 R 254
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/272 (19%), Positives = 113/272 (41%), Gaps = 31/272 (11%)
Query: 6 TSWFRGRVIGQGSFGCVF--IAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVF----- 58
T + + +V+G G+FG V+ + P+ +P + + E +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 59 DNLNGCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFT 118
DN + C + C + L+++ G L D + + N + + + ++
Sbjct: 77 DNPHVCRLLGICLTSTV----------QLIMQLMPFGCLLDYVREHKDN-IGSQYLLNWC 125
Query: 119 RCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSM 178
I +G+ ++ D VH D+ N+L+ Q KI D G AK +++
Sbjct: 126 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH----VKITDFGRAKLLGAEEKEYHAEGG 181
Query: 179 RGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEH 237
+ ++A E+++ + SD+W+ G V E+++ G + + + ++ SI+
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGE 238
Query: 238 SLPEIPSRVSKEARDFLRRCFV----RKPAFR 265
LP+ P + + + +C++ +P FR
Sbjct: 239 RLPQ-PPICTIDVYMIMVKCWMIDADSRPKFR 269
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/272 (19%), Positives = 113/272 (41%), Gaps = 31/272 (11%)
Query: 6 TSWFRGRVIGQGSFGCVF--IAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVF----- 58
T + + +V+G G+FG V+ + P+ +P + + E +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 59 DNLNGCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFT 118
DN + C + C + L+ + G L D + + N + + + ++
Sbjct: 82 DNPHVCRLLGICLTSTV----------QLITQLMPFGCLLDYVREHKDN-IGSQYLLNWC 130
Query: 119 RCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSM 178
I +G+ ++ D VH D+ N+L+ Q KI D G+AK +++
Sbjct: 131 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH----VKITDFGLAKLLGAEEKEYHAEGG 186
Query: 179 RGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEH 237
+ ++A E+++ + SD+W+ G V E+++ G + + + ++ SI+
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGE 243
Query: 238 SLPEIPSRVSKEARDFLRRCFV----RKPAFR 265
LP+ P + + + +C++ +P FR
Sbjct: 244 RLPQ-PPICTIDVYMIMVKCWMIDADSRPKFR 274
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/272 (19%), Positives = 113/272 (41%), Gaps = 31/272 (11%)
Query: 6 TSWFRGRVIGQGSFGCVF--IAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVF----- 58
T + + +V+G G+FG V+ + P+ +P + + E +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 59 DNLNGCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFT 118
DN + C + C + L+ + G L D + + N + + + ++
Sbjct: 78 DNPHVCRLLGICLTSTV----------QLITQLMPFGCLLDYVREHKDN-IGSQYLLNWC 126
Query: 119 RCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSM 178
I +G+ ++ D VH D+ N+L+ Q KI D G+AK +++
Sbjct: 127 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH----VKITDFGLAKLLGAEEKEYHAEGG 182
Query: 179 RGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEH 237
+ ++A E+++ + SD+W+ G V E+++ G + + + ++ SI+
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGE 239
Query: 238 SLPEIPSRVSKEARDFLRRCFV----RKPAFR 265
LP+ P + + + +C++ +P FR
Sbjct: 240 RLPQ-PPICTIDVYMIMVKCWMIDADSRPKFR 270
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/272 (19%), Positives = 113/272 (41%), Gaps = 31/272 (11%)
Query: 6 TSWFRGRVIGQGSFGCVF--IAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVF----- 58
T + + +V+G G+FG V+ + P+ +P + + E +
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 59 DNLNGCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFT 118
DN + C + C + L+ + G L D + + N + + + ++
Sbjct: 69 DNPHVCRLLGICLTSTV----------QLITQLMPFGCLLDYVREHKDN-IGSQYLLNWC 117
Query: 119 RCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSM 178
I +G+ ++ D VH D+ N+L+ Q KI D G+AK +++
Sbjct: 118 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH----VKITDFGLAKLLGAEEKEYHAEGG 173
Query: 179 RGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEH 237
+ ++A E+++ + SD+W+ G V E+++ G + + + ++ SI+
Sbjct: 174 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGE 230
Query: 238 SLPEIPSRVSKEARDFLRRCFV----RKPAFR 265
LP+ P + + + +C++ +P FR
Sbjct: 231 RLPQ-PPICTIDVYMIMVKCWMIDADSRPKFR 261
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/272 (19%), Positives = 113/272 (41%), Gaps = 31/272 (11%)
Query: 6 TSWFRGRVIGQGSFGCVF--IAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVF----- 58
T + + +V+G G+FG V+ + P+ +P + + E +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 59 DNLNGCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFT 118
DN + C + C + L+ + G L D + + N + + + ++
Sbjct: 75 DNPHVCRLLGICLTSTV----------QLITQLMPFGCLLDYVREHKDN-IGSQYLLNWC 123
Query: 119 RCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSM 178
I +G+ ++ D VH D+ N+L+ Q KI D G+AK +++
Sbjct: 124 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH----VKITDFGLAKLLGAEEKEYHAEGG 179
Query: 179 RGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEH 237
+ ++A E+++ + SD+W+ G V E+++ G + + + ++ SI+
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGE 236
Query: 238 SLPEIPSRVSKEARDFLRRCFV----RKPAFR 265
LP+ P + + + +C++ +P FR
Sbjct: 237 RLPQ-PPICTIDVYMIMVKCWMIDADSRPKFR 267
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 89/212 (41%), Gaps = 38/212 (17%)
Query: 96 TLGDLIEKCNGNGLPEKDVRHFT-----RCILEGIGHIHDSGYVHCDVKPDNILLVATQS 150
L DL+E N + K + + R I G+ H+H +H D+KP NIL+ + S
Sbjct: 94 NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILV--STS 151
Query: 151 GKFVAK-----------IADLGVAKR----SRHCKRQKFDPSMRGTPLYLAPETV----- 190
+F A I+D G+ K+ + +PS GT + APE +
Sbjct: 152 SRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPS--GTSGWRAPELLEESNN 209
Query: 191 --VQHMQEAPSDIWALGCVVLEMLS-GRQAW---VVKEDCSIDQLFSIIGDEHSLPEIPS 244
+ DI+++GCV +LS G+ + +E I +FS+ DE S
Sbjct: 210 LQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSL--DEMKCLHDRS 267
Query: 245 RVSKEARDFLRRCFVRKPAFRFTAEMLLDDPF 276
++ EA D + + P R TA +L P
Sbjct: 268 LIA-EATDLISQMIDHDPLKRPTAMKVLRHPL 298
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 58/137 (42%), Gaps = 14/137 (10%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRH----------FTRCILEGIGHIHDSGYVHC 136
+++E+ G L + +P KD+ ++ + +G+ + +H
Sbjct: 109 VIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHR 168
Query: 137 DVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQE 196
D+ NILL S K V KI D G+A+ R ++APET+ +
Sbjct: 169 DLAARNILL----SEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYT 224
Query: 197 APSDIWALGCVVLEMLS 213
SD+W+ G ++ E+ S
Sbjct: 225 IQSDVWSFGVLLWEIFS 241
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/272 (19%), Positives = 113/272 (41%), Gaps = 31/272 (11%)
Query: 6 TSWFRGRVIGQGSFGCVF--IAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVF----- 58
T + + +V+G G+FG V+ + P+ +P + + E +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 59 DNLNGCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFT 118
DN + C + C + L+++ G L D + + N + + + ++
Sbjct: 79 DNPHVCRLLGICLTSTV----------QLIMQLMPFGCLLDYVREHKDN-IGSQYLLNWC 127
Query: 119 RCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSM 178
I +G+ ++ D VH D+ N+L+ Q KI D G AK +++
Sbjct: 128 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH----VKITDFGRAKLLGAEEKEYHAEGG 183
Query: 179 RGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEH 237
+ ++A E+++ + SD+W+ G V E+++ G + + + ++ SI+
Sbjct: 184 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGE 240
Query: 238 SLPEIPSRVSKEARDFLRRCFV----RKPAFR 265
LP+ P + + + +C++ +P FR
Sbjct: 241 RLPQ-PPICTIDVYMIMVKCWMIDADSRPKFR 271
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 80/183 (43%), Gaps = 12/183 (6%)
Query: 85 YNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNIL 144
+ ++ E+ G L D + +CN + + + I + ++ ++H D+ N L
Sbjct: 82 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 141
Query: 145 LVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGT-PL-YLAPETVVQHMQEAPSDIW 202
+ + K+AD G+ SR F P+ + APE++ + SD+W
Sbjct: 142 VGENH----LVKVADFGL---SRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 194
Query: 203 ALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKP 262
A G ++ E+ + + D S Q++ ++ ++ + E P ++ + +R C+ P
Sbjct: 195 AFGVLLWEIATYGMSPYPGIDPS--QVYELLEKDYRM-ERPEGCPEKVYELMRACWQWNP 251
Query: 263 AFR 265
+ R
Sbjct: 252 SDR 254
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/181 (18%), Positives = 78/181 (43%), Gaps = 8/181 (4%)
Query: 85 YNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNIL 144
+ ++ E+ G L D + +CN + + + I + ++ ++H D+ N L
Sbjct: 84 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 143
Query: 145 LVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWAL 204
+ + K+AD G++ R + + APE++ + SD+WA
Sbjct: 144 VGENH----LVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 198
Query: 205 GCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAF 264
G ++ E+ + + D S Q++ ++ ++ + E P ++ + +R C+ P+
Sbjct: 199 GVLLWEIATYGMSPYPGIDLS--QVYELLEKDYRM-ERPEGCPEKVYELMRACWQWNPSD 255
Query: 265 R 265
R
Sbjct: 256 R 256
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 14/107 (13%)
Query: 116 HFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLG-VAKRSRHCKRQKF 174
H I E + +H G +H D+KP NI V K+ D G V + + Q
Sbjct: 168 HIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDD----VVKVGDFGLVTAMDQDEEEQTV 223
Query: 175 DPSMR---------GTPLYLAPETVVQHMQEAPSDIWALGCVVLEML 212
M GT LY++PE + + DI++LG ++ E+L
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 89/212 (41%), Gaps = 38/212 (17%)
Query: 96 TLGDLIEKCNGNGLPEKDVRHFT-----RCILEGIGHIHDSGYVHCDVKPDNILLVATQS 150
L DL+E N + K + + R I G+ H+H +H D+KP NIL+ + S
Sbjct: 94 NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILV--STS 151
Query: 151 GKFVAK-----------IADLGVAKR----SRHCKRQKFDPSMRGTPLYLAPETV----- 190
+F A I+D G+ K+ + +PS GT + APE +
Sbjct: 152 SRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPS--GTSGWRAPELLEESNN 209
Query: 191 --VQHMQEAPSDIWALGCVVLEMLS-GRQAW---VVKEDCSIDQLFSIIGDEHSLPEIPS 244
+ DI+++GCV +LS G+ + +E I +FS+ DE S
Sbjct: 210 LQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSL--DEMKCLHDRS 267
Query: 245 RVSKEARDFLRRCFVRKPAFRFTAEMLLDDPF 276
++ EA D + + P R TA +L P
Sbjct: 268 LIA-EATDLISQMIDHDPLKRPTAMKVLRHPL 298
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/181 (18%), Positives = 78/181 (43%), Gaps = 8/181 (4%)
Query: 85 YNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNIL 144
+ ++ E+ G L D + +CN + + + I + ++ ++H D+ N L
Sbjct: 84 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 143
Query: 145 LVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWAL 204
+ + K+AD G++ R + + APE++ + SD+WA
Sbjct: 144 VGENH----LVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 198
Query: 205 GCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAF 264
G ++ E+ + + D S Q++ ++ ++ + E P ++ + +R C+ P+
Sbjct: 199 GVLLWEIATYGMSPYPGIDLS--QVYELLEKDYRM-ERPEGCPEKVYELMRACWQWNPSD 255
Query: 265 R 265
R
Sbjct: 256 R 256
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/181 (18%), Positives = 78/181 (43%), Gaps = 8/181 (4%)
Query: 85 YNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNIL 144
+ ++ E+ G L D + +CN + + + I + ++ ++H D+ N L
Sbjct: 89 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 148
Query: 145 LVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWAL 204
+ + K+AD G++ R + + APE++ + SD+WA
Sbjct: 149 VGENH----LVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 203
Query: 205 GCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAF 264
G ++ E+ + + D S Q++ ++ ++ + E P ++ + +R C+ P+
Sbjct: 204 GVLLWEIATYGMSPYPGIDLS--QVYELLEKDYRM-ERPEGCPEKVYELMRACWQWNPSD 260
Query: 265 R 265
R
Sbjct: 261 R 261
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/215 (19%), Positives = 89/215 (41%), Gaps = 22/215 (10%)
Query: 6 TSWFRGRVIGQGSFGCVF--IAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVF----- 58
T + + +V+G G+FG V+ + P+ +P + + E +
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASV 108
Query: 59 DNLNGCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFT 118
DN + C + C + L+ + G L D + + N + + + ++
Sbjct: 109 DNPHVCRLLGICLTSTV----------QLITQLMPFGCLLDYVREHKDN-IGSQYLLNWC 157
Query: 119 RCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSM 178
I +G+ ++ D VH D+ N+L+ Q KI D G+AK +++
Sbjct: 158 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH----VKITDFGLAKLLGAEEKEYHAEGG 213
Query: 179 RGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS 213
+ ++A E+++ + SD+W+ G V E+++
Sbjct: 214 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 58/137 (42%), Gaps = 14/137 (10%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRH----------FTRCILEGIGHIHDSGYVHC 136
+++E+ G L + +P KD+ ++ + +G+ + +H
Sbjct: 109 VIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASRKXIHR 168
Query: 137 DVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQE 196
D+ NILL S K V KI D G+A+ R ++APET+ +
Sbjct: 169 DLAARNILL----SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYT 224
Query: 197 APSDIWALGCVVLEMLS 213
SD+W+ G ++ E+ S
Sbjct: 225 IQSDVWSFGVLLWEIFS 241
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/184 (19%), Positives = 79/184 (42%), Gaps = 8/184 (4%)
Query: 82 EMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPD 141
E + ++ E+ G L D + +CN + + + I + ++ ++H D+
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 145
Query: 142 NILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDI 201
N L+ + K+AD G++ R + + APE++ + SD+
Sbjct: 146 NCLV----GENHLVKVADFGLS-RLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 202 WALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRK 261
WA G ++ E+ + + D S Q++ ++ ++ + E P ++ + +R C+
Sbjct: 201 WAFGVLLWEIATYGMSPYPGIDLS--QVYELLEKDYRM-ERPEGCPEKVYELMRACWQWN 257
Query: 262 PAFR 265
P+ R
Sbjct: 258 PSDR 261
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/181 (18%), Positives = 78/181 (43%), Gaps = 8/181 (4%)
Query: 85 YNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNIL 144
+ ++ E+ G L D + +CN + + + I + ++ ++H D+ N L
Sbjct: 89 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 148
Query: 145 LVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWAL 204
+ + K+AD G++ R + + APE++ + SD+WA
Sbjct: 149 VGENH----LVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 203
Query: 205 GCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAF 264
G ++ E+ + + D S Q++ ++ ++ + E P ++ + +R C+ P+
Sbjct: 204 GVLLWEIATYGMSPYPGIDLS--QVYELLEKDYRM-ERPEGCPEKVYELMRACWQWNPSD 260
Query: 265 R 265
R
Sbjct: 261 R 261
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/184 (19%), Positives = 79/184 (42%), Gaps = 8/184 (4%)
Query: 82 EMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPD 141
E + ++ E+ G L D + +CN + + + I + ++ ++H D+
Sbjct: 85 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 144
Query: 142 NILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDI 201
N L+ + K+AD G++ R + + APE++ + SD+
Sbjct: 145 NCLV----GENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 199
Query: 202 WALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRK 261
WA G ++ E+ + + D S Q++ ++ ++ + E P ++ + +R C+
Sbjct: 200 WAFGVLLWEIATYGMSPYPGIDLS--QVYELLEKDYRM-ERPEGCPEKVYELMRACWQWN 256
Query: 262 PAFR 265
P+ R
Sbjct: 257 PSDR 260
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/184 (19%), Positives = 79/184 (42%), Gaps = 8/184 (4%)
Query: 82 EMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPD 141
E + ++ E+ G L D + +CN + + + I + ++ ++H D+
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 145
Query: 142 NILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDI 201
N L+ + K+AD G++ R + + APE++ + SD+
Sbjct: 146 NCLV----GENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 202 WALGCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRK 261
WA G ++ E+ + + D S Q++ ++ ++ + E P ++ + +R C+
Sbjct: 201 WAFGVLLWEIATYGMSPYPGIDLS--QVYELLEKDYRM-ERPEGCPEKVYELMRACWQWN 257
Query: 262 PAFR 265
P+ R
Sbjct: 258 PSDR 261
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/181 (18%), Positives = 78/181 (43%), Gaps = 8/181 (4%)
Query: 85 YNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNIL 144
+ ++ E+ G L D + +CN + + + I + ++ ++H D+ N L
Sbjct: 97 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 156
Query: 145 LVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWAL 204
+ + K+AD G++ R + + APE++ + SD+WA
Sbjct: 157 VGENH----LVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 211
Query: 205 GCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAF 264
G ++ E+ + + D S Q++ ++ ++ + E P ++ + +R C+ P+
Sbjct: 212 GVLLWEIATYGMSPYPGIDLS--QVYELLEKDYRM-ERPEGCPEKVYELMRACWQWNPSD 268
Query: 265 R 265
R
Sbjct: 269 R 269
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 83/201 (41%), Gaps = 21/201 (10%)
Query: 87 LLLEYAAGGTLGDLI-----EKCNGNGLPEKDVRHFTRC---ILEGIGHIHDSGYVHCDV 138
+++E A G L + E N G P ++ + I +G+ +++ +VH ++
Sbjct: 98 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRNL 157
Query: 139 KPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAP 198
N ++ + F KI D G+ + + ++APE++ +
Sbjct: 158 AARNCMV----AHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTS 213
Query: 199 SDIWALGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRC 257
SD+W+ G V+ E+ S Q + + S +Q+ + D L + P + D +R C
Sbjct: 214 SDMWSFGVVLWEITSLAEQPY---QGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMC 269
Query: 258 FVRKPAFRFT----AEMLLDD 274
+ P R T +L DD
Sbjct: 270 WQFNPNMRPTFLEIVNLLKDD 290
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/181 (18%), Positives = 78/181 (43%), Gaps = 8/181 (4%)
Query: 85 YNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNIL 144
+ ++ E+ G L D + +CN + + + I + ++ ++H D+ N L
Sbjct: 84 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 143
Query: 145 LVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWAL 204
+ + K+AD G++ R + + APE++ + SD+WA
Sbjct: 144 V----GENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 198
Query: 205 GCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAF 264
G ++ E+ + + D S Q++ ++ ++ + E P ++ + +R C+ P+
Sbjct: 199 GVLLWEIATYGMSPYPGIDLS--QVYELLEKDYRM-ERPEGCPEKVYELMRACWQWNPSD 255
Query: 265 R 265
R
Sbjct: 256 R 256
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/181 (18%), Positives = 78/181 (43%), Gaps = 8/181 (4%)
Query: 85 YNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNIL 144
+ ++ E+ G L D + +CN + + + I + ++ ++H D+ N L
Sbjct: 86 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 145
Query: 145 LVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWAL 204
+ + K+AD G++ R + + APE++ + SD+WA
Sbjct: 146 VGENH----LVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 200
Query: 205 GCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAF 264
G ++ E+ + + D S Q++ ++ ++ + E P ++ + +R C+ P+
Sbjct: 201 GVLLWEIATYGMSPYPGIDLS--QVYELLEKDYRM-ERPEGCPEKVYELMRACWQWNPSD 257
Query: 265 R 265
R
Sbjct: 258 R 258
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 83/201 (41%), Gaps = 21/201 (10%)
Query: 87 LLLEYAAGGTLGDLI-----EKCNGNGLPEKDVRHFTRC---ILEGIGHIHDSGYVHCDV 138
+++E A G L + E N G P ++ + I +G+ +++ +VH ++
Sbjct: 97 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRNL 156
Query: 139 KPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAP 198
N ++ + F KI D G+ + + ++APE++ +
Sbjct: 157 AARNCMV----AHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTS 212
Query: 199 SDIWALGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRC 257
SD+W+ G V+ E+ S Q + + S +Q+ + D L + P + D +R C
Sbjct: 213 SDMWSFGVVLWEITSLAEQPY---QGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMC 268
Query: 258 FVRKPAFRFT----AEMLLDD 274
+ P R T +L DD
Sbjct: 269 WQFNPNMRPTFLEIVNLLKDD 289
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 110/273 (40%), Gaps = 40/273 (14%)
Query: 2 DSDGTSWFRGRVIGQGSFGCVFIAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVFDNL 61
D +G W G+ IG G FG +++A P + Q+ +F L
Sbjct: 33 DMEGNQWVLGKKIGSGGFGLIYLAFPTNKPE--------KDARHVVKVEYQENGPLFSEL 84
Query: 62 NGCPFVL--ECFGEEITMGENGEMAY-NLLLEYAAGGT--------------LGDLIEKC 104
V +C + I E ++ Y + L Y +G T LG ++K
Sbjct: 85 KFYQRVAKKDCIKKWI---ERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKI 141
Query: 105 NG-NGLPEKD-VRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGV 162
+G NG +K V +L+ + +IH++ YVH D+K N+LL + +AD G+
Sbjct: 142 SGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVY--LADYGL 199
Query: 163 AKR---SRHCKRQKFDP--SMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLSGRQA 217
+ R + + K+ + +P GT + + + SD+ LG +L L G+
Sbjct: 200 SYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLP 259
Query: 218 WVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEA 250
W E D + + L E+P V K A
Sbjct: 260 W---EQNLKDPVAVQTAKTNLLDELPQSVLKWA 289
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/181 (18%), Positives = 78/181 (43%), Gaps = 8/181 (4%)
Query: 85 YNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNIL 144
+ ++ E+ G L D + +CN + + + I + ++ ++H D+ N L
Sbjct: 84 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 143
Query: 145 LVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWAL 204
+ + K+AD G++ R + + APE++ + SD+WA
Sbjct: 144 V----GENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 198
Query: 205 GCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAF 264
G ++ E+ + + D S Q++ ++ ++ + E P ++ + +R C+ P+
Sbjct: 199 GVLLWEIATYGMSPYPGIDLS--QVYELLEKDYRM-ERPEGCPEKVYELMRACWQWNPSD 255
Query: 265 R 265
R
Sbjct: 256 R 256
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/272 (18%), Positives = 113/272 (41%), Gaps = 31/272 (11%)
Query: 6 TSWFRGRVIGQGSFGCVF--IAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVF----- 58
T + + +V+ G+FG V+ + P+ +P + + E +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 59 DNLNGCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFT 118
DN + C + C + L+++ G L D + + N + + + ++
Sbjct: 82 DNPHVCRLLGICLTSTV----------QLIMQLMPFGCLLDYVREHKDN-IGSQYLLNWC 130
Query: 119 RCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSM 178
I +G+ ++ D VH D+ N+L+ Q KI D G+AK +++
Sbjct: 131 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH----VKITDFGLAKLLGAEEKEYHAEGG 186
Query: 179 RGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEH 237
+ ++A E+++ + SD+W+ G V E+++ G + + + ++ SI+
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGE 243
Query: 238 SLPEIPSRVSKEARDFLRRCFV----RKPAFR 265
LP+ P + + + +C++ +P FR
Sbjct: 244 RLPQ-PPICTIDVYMIMVKCWMIDADSRPKFR 274
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/181 (18%), Positives = 78/181 (43%), Gaps = 8/181 (4%)
Query: 85 YNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNIL 144
+ ++ E+ G L D + +CN + + + I + ++ ++H D+ N L
Sbjct: 86 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 145
Query: 145 LVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWAL 204
+ + K+AD G++ R + + APE++ + SD+WA
Sbjct: 146 VGENH----LVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 200
Query: 205 GCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAF 264
G ++ E+ + + D S Q++ ++ ++ + E P ++ + +R C+ P+
Sbjct: 201 GVLLWEIATYGMSPYPGIDLS--QVYELLEKDYRM-ERPEGCPEKVYELMRACWQWNPSD 257
Query: 265 R 265
R
Sbjct: 258 R 258
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/181 (18%), Positives = 78/181 (43%), Gaps = 8/181 (4%)
Query: 85 YNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNIL 144
+ ++ E+ G L D + +CN + + + I + ++ ++H D+ N L
Sbjct: 82 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 141
Query: 145 LVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWAL 204
+ + K+AD G++ R + + APE++ + SD+WA
Sbjct: 142 VGENH----LVKVADFGLS-RLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 196
Query: 205 GCVVLEMLSGRQAWVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRKPAF 264
G ++ E+ + + D S Q++ ++ ++ + E P ++ + +R C+ P+
Sbjct: 197 GVLLWEIATYGMSPYPGIDPS--QVYELLEKDYRM-ERPEGCPEKVYELMRACWQWNPSD 253
Query: 265 R 265
R
Sbjct: 254 R 254
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/272 (19%), Positives = 112/272 (41%), Gaps = 31/272 (11%)
Query: 6 TSWFRGRVIGQGSFGCVF--IAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVF----- 58
T + + +V+G G+FG V+ + P+ +P + + E +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 59 DNLNGCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFT 118
DN + C + C + L+ + G L D + + N + + + ++
Sbjct: 82 DNPHVCRLLGICLTSTV----------QLITQLMPFGCLLDYVREHKDN-IGSQYLLNWC 130
Query: 119 RCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSM 178
I +G+ ++ D VH D+ N+L+ Q KI D G AK +++
Sbjct: 131 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH----VKITDFGRAKLLGAEEKEYHAEGG 186
Query: 179 RGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEH 237
+ ++A E+++ + SD+W+ G V E+++ G + + + ++ SI+
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGE 243
Query: 238 SLPEIPSRVSKEARDFLRRCFV----RKPAFR 265
LP+ P + + + +C++ +P FR
Sbjct: 244 RLPQ-PPICTIDVYMIMVKCWMIDADSRPKFR 274
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 52/272 (19%), Positives = 112/272 (41%), Gaps = 31/272 (11%)
Query: 6 TSWFRGRVIGQGSFGCVF--IAKPKSNSSFLPPLMXXXXXXXXXXXXLQKEKEVF----- 58
T + + +V+G G+FG V+ + P+ +P + + E +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 59 DNLNGCPFVLECFGEEITMGENGEMAYNLLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFT 118
DN + C + C + L+ + G L D + + N + + + ++
Sbjct: 75 DNPHVCRLLGICLTSTV----------QLITQLMPFGCLLDYVREHKDN-IGSQYLLNWC 123
Query: 119 RCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSM 178
I +G+ ++ D VH D+ N+L+ Q KI D G AK +++
Sbjct: 124 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH----VKITDFGRAKLLGAEEKEYHAEGG 179
Query: 179 RGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEH 237
+ ++A E+++ + SD+W+ G V E+++ G + + + ++ SI+
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGE 236
Query: 238 SLPEIPSRVSKEARDFLRRCFV----RKPAFR 265
LP+ P + + + +C++ +P FR
Sbjct: 237 RLPQ-PPICTIDVYMIMVKCWMIDADSRPKFR 267
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 4/114 (3%)
Query: 100 LIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIAD 159
L E+ + N L +D+ F + +G+ + VH D+ N+L+ GK V KI D
Sbjct: 160 LEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVT---HGK-VVKICD 215
Query: 160 LGVAKRSRHCKRQKFDPSMRGTPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS 213
G+A+ + R ++APE++ + + SD+W+ G ++ E+ S
Sbjct: 216 FGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 9/130 (6%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++L Y G L + I N KD+ F + +G+ ++ +VH D+ N +L
Sbjct: 108 VVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML- 165
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPL---YLAPETVVQHMQEAPSDIWA 203
KF K+AD G+A R + K + G L ++A E++ SD+W+
Sbjct: 166 ---DEKFTVKVADFGLA-RDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 221
Query: 204 LGCVVLEMLS 213
G ++ E+++
Sbjct: 222 FGVLLWELMT 231
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 83/184 (45%), Gaps = 19/184 (10%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
+++E G LG +E+ N N L + ++ I + + ++ VH D+ NIL+
Sbjct: 101 IIMELYPYGELGHYLER-NKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVA 159
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKF-DPSMRGTPL-YLAPETVVQHMQEAPSDIWAL 204
+ + K+ D G+ SR+ + + + S+ P+ +++PE++ SD+W
Sbjct: 160 SPEC----VKLGDFGL---SRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMF 212
Query: 205 GCVVLEMLS-GRQA--WVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRK 261
+ E+LS G+Q W+ +D + ++ LP+ P + RC+
Sbjct: 213 AVCMWEILSFGKQPFFWLENKD-----VIGVLEKGDRLPK-PDLCPPVLYTLMTRCWDYD 266
Query: 262 PAFR 265
P+ R
Sbjct: 267 PSDR 270
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 9/130 (6%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++L Y G L + I N KD+ F + +G+ ++ +VH D+ N +L
Sbjct: 109 VVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML- 166
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPL---YLAPETVVQHMQEAPSDIWA 203
KF K+AD G+A R + K + G L ++A E++ SD+W+
Sbjct: 167 ---DEKFTVKVADFGLA-RDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 222
Query: 204 LGCVVLEMLS 213
G ++ E+++
Sbjct: 223 FGVLLWELMT 232
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 9/130 (6%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++L Y G L + I N KD+ F + +G+ ++ +VH D+ N +L
Sbjct: 101 VVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML- 158
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPL---YLAPETVVQHMQEAPSDIWA 203
KF K+AD G+A R + K + G L ++A E++ SD+W+
Sbjct: 159 ---DEKFTVKVADFGLA-RDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 214
Query: 204 LGCVVLEMLS 213
G ++ E+++
Sbjct: 215 FGVLLWELMT 224
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 83/184 (45%), Gaps = 19/184 (10%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
+++E G LG +E+ N N L + ++ I + + ++ VH D+ NIL+
Sbjct: 89 IIMELYPYGELGHYLER-NKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVA 147
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKF-DPSMRGTPL-YLAPETVVQHMQEAPSDIWAL 204
+ + K+ D G+ SR+ + + + S+ P+ +++PE++ SD+W
Sbjct: 148 SPEC----VKLGDFGL---SRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMF 200
Query: 205 GCVVLEMLS-GRQA--WVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRK 261
+ E+LS G+Q W+ +D + ++ LP+ P + RC+
Sbjct: 201 AVCMWEILSFGKQPFFWLENKD-----VIGVLEKGDRLPK-PDLCPPVLYTLMTRCWDYD 254
Query: 262 PAFR 265
P+ R
Sbjct: 255 PSDR 258
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 9/130 (6%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++L Y G L + I N KD+ F + +G+ ++ +VH D+ N +L
Sbjct: 128 VVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML- 185
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPL---YLAPETVVQHMQEAPSDIWA 203
KF K+AD G+A R + K + G L ++A E++ SD+W+
Sbjct: 186 ---DEKFTVKVADFGLA-RDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 241
Query: 204 LGCVVLEMLS 213
G ++ E+++
Sbjct: 242 FGVLLWELMT 251
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 83/184 (45%), Gaps = 19/184 (10%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
+++E G LG +E+ N N L + ++ I + + ++ VH D+ NIL+
Sbjct: 85 IIMELYPYGELGHYLER-NKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVA 143
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKF-DPSMRGTPL-YLAPETVVQHMQEAPSDIWAL 204
+ + K+ D G+ SR+ + + + S+ P+ +++PE++ SD+W
Sbjct: 144 SPEC----VKLGDFGL---SRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMF 196
Query: 205 GCVVLEMLS-GRQA--WVVKEDCSIDQLFSIIGDEHSLPEIPSRVSKEARDFLRRCFVRK 261
+ E+LS G+Q W+ +D + ++ LP+ P + RC+
Sbjct: 197 AVCMWEILSFGKQPFFWLENKD-----VIGVLEKGDRLPK-PDLCPPVLYTLMTRCWDYD 250
Query: 262 PAFR 265
P+ R
Sbjct: 251 PSDR 254
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 9/130 (6%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++L Y G L + I N KD+ F + +G+ ++ +VH D+ N +L
Sbjct: 107 VVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML- 164
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPL---YLAPETVVQHMQEAPSDIWA 203
KF K+AD G+A R + K + G L ++A E++ SD+W+
Sbjct: 165 ---DEKFTVKVADFGLA-RDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 220
Query: 204 LGCVVLEMLS 213
G ++ E+++
Sbjct: 221 FGVLLWELMT 230
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 70/150 (46%), Gaps = 13/150 (8%)
Query: 121 ILEGIGHIHDSGYVHCDVKPDNILLVATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRG 180
I +G+ ++ D VH D+ N+L+ Q KI D G+AK +++ +
Sbjct: 133 IAKGMNYLEDRRLVHRDLAARNVLVKTPQH----VKITDFGLAKLLGAEEKEYHAEGGKV 188
Query: 181 TPLYLAPETVVQHMQEAPSDIWALGCVVLEMLS-GRQAWVVKEDCSIDQLFSIIGDEHSL 239
++A E+++ + SD+W+ G V E+++ G + + + ++ SI+ L
Sbjct: 189 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGERL 245
Query: 240 PEIPSRVSKEARDFLRRCFV----RKPAFR 265
P+ P + + + +C++ +P FR
Sbjct: 246 PQ-PPICTIDVYMIMVKCWMIDADSRPKFR 274
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 9/130 (6%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++L Y G L + I N KD+ F + +G+ ++ +VH D+ N +L
Sbjct: 127 VVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML- 184
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPL---YLAPETVVQHMQEAPSDIWA 203
KF K+AD G+A R + K + G L ++A E++ SD+W+
Sbjct: 185 ---DEKFTVKVADFGLA-RDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 240
Query: 204 LGCVVLEMLS 213
G ++ E+++
Sbjct: 241 FGVLLWELMT 250
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 9/130 (6%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++L Y G L + I N KD+ F + +G+ ++ +VH D+ N +L
Sbjct: 106 VVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML- 163
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPL---YLAPETVVQHMQEAPSDIWA 203
KF K+AD G+A R + K + G L ++A E++ SD+W+
Sbjct: 164 ---DEKFTVKVADFGLA-RDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 219
Query: 204 LGCVVLEMLS 213
G ++ E+++
Sbjct: 220 FGVLLWELMT 229
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 9/130 (6%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++L Y G L + I N KD+ F + +G+ ++ +VH D+ N +L
Sbjct: 109 VVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML- 166
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPL---YLAPETVVQHMQEAPSDIWA 203
KF K+AD G+A R + K + G L ++A E++ SD+W+
Sbjct: 167 ---DEKFTVKVADFGLA-RDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 222
Query: 204 LGCVVLEMLS 213
G ++ E+++
Sbjct: 223 FGVLLWELMT 232
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 9/130 (6%)
Query: 87 LLLEYAAGGTLGDLIEKCNGNGLPEKDVRHFTRCILEGIGHIHDSGYVHCDVKPDNILLV 146
++L Y G L + I N KD+ F + +G+ ++ +VH D+ N +L
Sbjct: 108 VVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML- 165
Query: 147 ATQSGKFVAKIADLGVAKRSRHCKRQKFDPSMRGTPL---YLAPETVVQHMQEAPSDIWA 203
KF K+AD G+A R + K + G L ++A E++ SD+W+
Sbjct: 166 ---DEKFTVKVADFGLA-RDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 221
Query: 204 LGCVVLEMLS 213
G ++ E+++
Sbjct: 222 FGVLLWELMT 231
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,034,187
Number of Sequences: 62578
Number of extensions: 453572
Number of successful extensions: 3531
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 791
Number of HSP's successfully gapped in prelim test: 306
Number of HSP's that attempted gapping in prelim test: 1279
Number of HSP's gapped (non-prelim): 1278
length of query: 362
length of database: 14,973,337
effective HSP length: 100
effective length of query: 262
effective length of database: 8,715,537
effective search space: 2283470694
effective search space used: 2283470694
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)