Your job contains 1 sequence.
>039292
MKREYAEISEISDEEWEPHSESFKPSRVLKINTRSPKPKPKPKPKPPPPIESFAYNKDEN
LEDDDVEEVVGPTAATNNRGRRFIVDDDEEEEEEEGEEEQEQEHGDFVEALQKCAKISAE
LKRELYGTTTSAACDRYAEVEASSVRIVTQSDIDDACGDEDSDFQPVLKPYQLVGVNFLL
LLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPASVLENWERELKKW
CPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHSVQQKDDRKILKRW
RWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSLLEFMMPDL
FATEDVDLKKLLNGEDRDLIGRMKSILGPFILRRLKSDVMQQLVPKIQWVEYVTMERPQE
DAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQISNYFVQFRKIANHPLLVRRIYS
DDDVVRFAKKLHPMGAFGFECTLERVIEELKNYSDFSIHQ
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 039292
(520 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2051678 - symbol:ETL1 species:3702 "Arabidopsi... 1806 3.2e-194 3
DICTYBASE|DDB_G0267556 - symbol:DDB_G0267556 "CHR group p... 583 1.0e-62 3
UNIPROTKB|Q5FWR0 - symbol:smarcad1 "SWI/SNF-related matri... 566 3.1e-57 3
UNIPROTKB|F1NAD2 - symbol:SMARCAD1 "Uncharacterized prote... 539 5.3e-53 2
UNIPROTKB|Q9H4L7 - symbol:SMARCAD1 "SWI/SNF-related matri... 543 1.3e-52 2
UNIPROTKB|E2RG62 - symbol:SMARCAD1 "Uncharacterized prote... 546 8.7e-52 1
UNIPROTKB|J9NX47 - symbol:SMARCAD1 "Uncharacterized prote... 546 8.7e-52 1
UNIPROTKB|J9PA79 - symbol:SMARCAD1 "Uncharacterized prote... 546 8.7e-52 1
UNIPROTKB|F1RWW3 - symbol:SMARCAD1 "Uncharacterized prote... 544 1.5e-51 1
FB|FBgn0032157 - symbol:Etl1 "Etl1 homologue" species:722... 539 1.9e-51 1
UNIPROTKB|E1B7X9 - symbol:SMARCAD1 "SWI/SNF-related matri... 541 3.1e-51 1
MGI|MGI:95453 - symbol:Smarcad1 "SWI/SNF-related, matrix-... 533 2.2e-50 1
RGD|1309640 - symbol:Smarcad1 "SWI/SNF-related, matrix-as... 530 4.6e-50 1
ZFIN|ZDB-GENE-091113-61 - symbol:si:dkey-76p7.6 "si:dkey-... 525 1.2e-49 1
POMBASE|SPCC1235.05c - symbol:fft2 "fun thirty related pr... 523 4.8e-49 1
SGD|S000000017 - symbol:FUN30 "Snf2p family member with A... 498 1.8e-47 2
ZFIN|ZDB-GENE-050522-499 - symbol:smarcad1 "SWI/SNF-relat... 487 4.5e-47 2
POMBASE|SPAC25A8.01c - symbol:fft3 "fun thirty related pr... 498 9.2e-47 1
DICTYBASE|DDB_G0267638 - symbol:DDB_G0267638 "CHR group p... 499 7.0e-46 1
DICTYBASE|DDB_G0292358 - symbol:ino80 "CHR group protein"... 485 9.8e-46 2
MGI|MGI:2444036 - symbol:Srcap "Snf2-related CREBBP activ... 473 1.2e-45 2
UNIPROTKB|G4NCV5 - symbol:MGG_01012 "ISWI chromatin-remod... 490 1.2e-45 1
UNIPROTKB|F6TQG2 - symbol:SMARCA1 "Probable global transc... 470 4.9e-45 2
FB|FBgn0011604 - symbol:Iswi "Imitation SWI" species:7227... 483 5.4e-45 1
CGD|CAL0000831 - symbol:orf19.1734 species:5476 "Candida ... 469 6.0e-45 2
UNIPROTKB|P28370 - symbol:SMARCA1 "Probable global transc... 470 6.2e-45 2
MGI|MGI:1935127 - symbol:Smarca1 "SWI/SNF related, matrix... 468 9.9e-45 2
RGD|1561046 - symbol:Smarca1 "SWI/SNF related, matrix ass... 468 1.2e-44 2
UNIPROTKB|J9PA15 - symbol:SRCAP "Uncharacterized protein"... 471 1.8e-44 2
UNIPROTKB|F1P0A4 - symbol:SMARCA5 "Uncharacterized protei... 468 1.9e-44 1
UNIPROTKB|I3LTT5 - symbol:SMARCA1 "Uncharacterized protei... 472 2.9e-44 1
UNIPROTKB|E2QVR5 - symbol:SMARCA1 "Uncharacterized protei... 465 3.0e-44 2
UNIPROTKB|F6XTU7 - symbol:SMARCA1 "Uncharacterized protei... 465 3.0e-44 2
UNIPROTKB|F6XHF3 - symbol:SRCAP "Uncharacterized protein"... 471 3.1e-44 2
UNIPROTKB|E2R6G6 - symbol:SRCAP "Uncharacterized protein"... 471 3.1e-44 2
CGD|CAL0001763 - symbol:orf19.1871 species:5476 "Candida ... 400 3.4e-44 2
TAIR|locus:2087780 - symbol:PIE1 "PHOTOPERIOD-INDEPENDENT... 480 4.2e-44 1
ZFIN|ZDB-GENE-021125-1 - symbol:smarca5 "SWI/SNF related,... 474 5.1e-44 1
UNIPROTKB|G3N326 - symbol:LOC788113 "Uncharacterized prot... 471 8.0e-44 1
UNIPROTKB|K7GMM0 - symbol:SMARCA1 "Uncharacterized protei... 472 8.9e-44 1
UNIPROTKB|K7GNV1 - symbol:SMARCA1 "Uncharacterized protei... 472 9.0e-44 1
UNIPROTKB|F1RTI9 - symbol:SMARCA1 "Uncharacterized protei... 472 9.2e-44 1
UNIPROTKB|K7GLQ2 - symbol:SMARCA1 "Uncharacterized protei... 472 9.2e-44 1
UNIPROTKB|F1N166 - symbol:SMARCA1 "Uncharacterized protei... 472 9.3e-44 1
WB|WBGene00002169 - symbol:isw-1 species:6239 "Caenorhabd... 471 1.0e-43 1
SGD|S000000449 - symbol:ISW1 "ATPase subunit of imitation... 471 1.3e-43 1
DICTYBASE|DDB_G0292948 - symbol:isw "CHR group protein" s... 463 1.4e-43 2
UNIPROTKB|Q6ZRS2 - symbol:SRCAP "Helicase SRCAP" species:... 471 1.4e-43 2
UNIPROTKB|E1C0M8 - symbol:SMARCA5 "Uncharacterized protei... 468 2.3e-43 1
WB|WBGene00010845 - symbol:M03C11.8 species:6239 "Caenorh... 457 2.4e-43 2
WB|WBGene00007027 - symbol:ssl-1 species:6239 "Caenorhabd... 473 2.9e-43 1
MGI|MGI:1935129 - symbol:Smarca5 "SWI/SNF related, matrix... 466 3.9e-43 1
RGD|1565642 - symbol:Srcap "Snf2-related CREBBP activator... 473 4.2e-43 1
UNIPROTKB|H0YMN5 - symbol:INO80 "DNA helicase INO80" spec... 466 4.3e-43 1
POMBASE|SPAC20G8.08c - symbol:fft1 "fun thirty related pr... 464 4.7e-43 1
UNIPROTKB|F1PKX5 - symbol:INO80 "Uncharacterized protein"... 468 5.2e-43 1
UNIPROTKB|E1BAN8 - symbol:INO80 "Uncharacterized protein"... 468 5.3e-43 1
UNIPROTKB|F1SSV0 - symbol:INO80 "Uncharacterized protein"... 468 5.3e-43 1
MGI|MGI:1915392 - symbol:Ino80 "INO80 homolog (S. cerevis... 467 6.7e-43 1
UNIPROTKB|F1RG74 - symbol:SRCAP "Uncharacterized protein"... 471 7.0e-43 1
UNIPROTKB|E1BC33 - symbol:LOC788113 "Uncharacterized prot... 471 7.1e-43 1
RGD|1308832 - symbol:Smarca5 "SWI/SNF related, matrix ass... 463 8.1e-43 1
UNIPROTKB|F1N052 - symbol:SMARCA5 "Uncharacterized protei... 463 8.1e-43 1
UNIPROTKB|E2QWV0 - symbol:SMARCA5 "Uncharacterized protei... 463 8.1e-43 1
UNIPROTKB|O60264 - symbol:SMARCA5 "SWI/SNF-related matrix... 463 8.1e-43 1
UNIPROTKB|F1RRG9 - symbol:SMARCA5 "Uncharacterized protei... 463 8.1e-43 1
UNIPROTKB|Q9ULG1 - symbol:INO80 "DNA helicase INO80" spec... 466 8.5e-43 1
GENEDB_PFALCIPARUM|PF08_0048 - symbol:PF08_0048 "ATP-depe... 467 1.0e-42 1
UNIPROTKB|C0H4W3 - symbol:PF08_0048 "Probable ATP-depende... 467 1.0e-42 1
UNIPROTKB|F1P3Q4 - symbol:SMARCA1 "Uncharacterized protei... 461 1.1e-42 1
ZFIN|ZDB-GENE-041014-72 - symbol:ino80 "INO80 homolog (S.... 465 1.1e-42 1
UNIPROTKB|F1NYY9 - symbol:INO80 "Uncharacterized protein"... 463 1.8e-42 1
ZFIN|ZDB-GENE-070705-296 - symbol:si:dkey-148b12.1 "si:dk... 459 2.1e-42 1
RGD|1310969 - symbol:Ino80 "INO80 homolog (S. cerevisiae)... 462 2.3e-42 1
TAIR|locus:2182978 - symbol:CHR17 "chromatin remodeling f... 459 2.3e-42 1
SGD|S000005831 - symbol:ISW2 "ATP-dependent DNA transloca... 458 3.2e-42 1
SGD|S000003118 - symbol:INO80 "ATPase and nucleosome spac... 460 3.4e-42 1
CGD|CAL0005422 - symbol:ISW2 species:5476 "Candida albica... 453 9.7e-42 1
UNIPROTKB|Q5A310 - symbol:ISW2 "Putative uncharacterized ... 453 9.7e-42 1
ASPGD|ASPL0000047400 - symbol:AN2285 species:162425 "Emer... 455 1.3e-41 1
FB|FBgn0020306 - symbol:dom "domino" species:7227 "Drosop... 455 3.5e-41 1
ASPGD|ASPL0000037473 - symbol:AN2973 species:162425 "Emer... 444 1.0e-40 1
SGD|S000002742 - symbol:SWR1 "Swi2/Snf2-related ATPase st... 444 1.8e-40 1
FB|FBgn0086613 - symbol:Ino80 "Ino80" species:7227 "Droso... 443 2.6e-40 1
POMBASE|SPAC29B12.01 - symbol:ino80 "SNF2 family helicase... 441 4.1e-40 1
ASPGD|ASPL0000041040 - symbol:AN9077 species:162425 "Emer... 428 9.0e-40 2
DICTYBASE|DDB_G0271052 - symbol:snf2b "SNF2-related prote... 432 1.5e-39 2
WB|WBGene00004204 - symbol:swsn-4 species:6239 "Caenorhab... 435 1.6e-39 1
ZFIN|ZDB-GENE-030605-1 - symbol:smarca4 "SWI/SNF related,... 423 2.7e-39 2
UNIPROTKB|F1S594 - symbol:LOC100622433 "Uncharacterized p... 426 4.6e-39 1
UNIPROTKB|K7GT64 - symbol:LOC100622433 "Uncharacterized p... 426 6.4e-39 1
ZFIN|ZDB-GENE-030131-5964 - symbol:smarca2 "SWI/SNF relat... 428 9.7e-39 1
UNIPROTKB|D4AA07 - symbol:Smarca4 "Transcription activato... 426 1.1e-38 1
ASPGD|ASPL0000056677 - symbol:AN1024 species:162425 "Emer... 422 1.2e-38 1
UNIPROTKB|D4A4J2 - symbol:Smarca2 "Protein Smarca2" speci... 426 1.5e-38 1
UNIPROTKB|E1C2F7 - symbol:E1C2F7 "Uncharacterized protein... 426 1.5e-38 1
UNIPROTKB|A5PKK5 - symbol:SMARCA2 "SMARCA2 protein" speci... 426 1.6e-38 1
UNIPROTKB|E2RKP4 - symbol:SMARCA2 "Uncharacterized protei... 426 1.6e-38 1
UNIPROTKB|F1SJG5 - symbol:SMARCA2 "Uncharacterized protei... 426 1.6e-38 1
UNIPROTKB|J9P5P2 - symbol:SMARCA2 "Uncharacterized protei... 426 1.6e-38 1
WARNING: Descriptions of 438 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2051678 [details] [associations]
symbol:ETL1 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AC005936 HOGENOM:HOG000172362
KO:K14439 EMBL:AY059857 EMBL:BT002576 IPI:IPI00520453 PIR:H84432
RefSeq:NP_178318.1 UniGene:At.13358 ProteinModelPortal:Q9ZUL5
SMR:Q9ZUL5 IntAct:Q9ZUL5 PaxDb:Q9ZUL5 PRIDE:Q9ZUL5
EnsemblPlants:AT2G02090.1 GeneID:814740 KEGG:ath:AT2G02090
TAIR:At2g02090 InParanoid:Q9ZUL5 OMA:CAKISAD PhylomeDB:Q9ZUL5
ProtClustDB:CLSN2683669 ArrayExpress:Q9ZUL5 Genevestigator:Q9ZUL5
Uniprot:Q9ZUL5
Length = 763
Score = 1806 (640.8 bits), Expect = 3.2e-194, Sum P(3) = 3.2e-194
Identities = 340/412 (82%), Positives = 376/412 (91%)
Query: 109 EALQKCAKISAELKRELYGTTTSAACDRYAEVEASSVRIVTQSDIDDACGDEDSDFQPVL 168
+ALQKCAKISA+L++ELYGT+ S DRY+EVE S+VRIVTQ+DIDDAC EDSDFQP+L
Sbjct: 155 KALQKCAKISADLRKELYGTS-SGVTDRYSEVETSTVRIVTQNDIDDACKAEDSDFQPIL 213
Query: 169 KPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPAS 228
KPYQLVGVNFLLLLY+KGI GAILADEMGLGKTIQAITYL LL LNNDPGPHL+VCPAS
Sbjct: 214 KPYQLVGVNFLLLLYKKGIEGAILADEMGLGKTIQAITYLTLLSRLNNDPGPHLVVCPAS 273
Query: 229 VLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHSV 288
VLENWEREL+KWCPSF+VLQYHGA R AYSREL+SL+KAG PPPFNVLLVCYSLFERHS
Sbjct: 274 VLENWERELRKWCPSFTVLQYHGAARAAYSRELNSLSKAGKPPPFNVLLVCYSLFERHSE 333
Query: 289 QQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHE 348
QQKDDRK+LKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHE
Sbjct: 334 QQKDDRKVLKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHE 393
Query: 349 LWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFILRRLKSDVMQQLVPKIQ 408
LWSLLEFM+PD+F TE+VDLKKLLN ED +LI RMKSILGPFILRRLKSDVMQQLVPKIQ
Sbjct: 394 LWSLLEFMLPDIFTTENVDLKKLLNAEDTELITRMKSILGPFILRRLKSDVMQQLVPKIQ 453
Query: 409 WVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQISNYFVQFRKI 468
VEYV MER QEDAY+ AIEEYRA S+AR+ KLS L ++ LP+RQISNYF QFRKI
Sbjct: 454 RVEYVLMERKQEDAYKEAIEEYRAASQARLVKLSSKSLNSLAKALPKRQISNYFTQFRKI 513
Query: 469 ANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFECTLERVIEELKNYSDFSIHQ 520
ANHPLL+RRIYSD+DV+R A+KLHP+GAFGFEC+L+RVIEE+K ++DF IHQ
Sbjct: 514 ANHPLLIRRIYSDEDVIRIARKLHPIGAFGFECSLDRVIEEVKGFNDFRIHQ 565
Score = 76 (31.8 bits), Expect = 3.2e-194, Sum P(3) = 3.2e-194
Identities = 24/57 (42%), Positives = 29/57 (50%)
Query: 1 MKREYAEISEISDEEWEPHSESFKPSRVLKINTRSXXXXXXXXXXXXXXIESFAYNK 57
MKR++ EISE EEW HS F SRVLK R+ IESFA+ +
Sbjct: 1 MKRDFDEISE---EEWSQHS--FNASRVLK-RPRTPKKTRAATNPTPS-IESFAFRR 50
Score = 38 (18.4 bits), Expect = 3.2e-194, Sum P(3) = 3.2e-194
Identities = 5/9 (55%), Positives = 9/9 (100%)
Query: 80 GRRFIVDDD 88
GRRF+++D+
Sbjct: 108 GRRFVIEDE 116
>DICTYBASE|DDB_G0267556 [details] [associations]
symbol:DDB_G0267556 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0267556
GO:GO:0005524 GO:GO:0003677 EMBL:AAFI02000003 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
RefSeq:XP_647125.1 ProteinModelPortal:Q55GQ9
EnsemblProtists:DDB0233433 GeneID:8615929 KEGG:ddi:DDB_G0267556
InParanoid:Q55GQ9 OMA:CANVVIF ProtClustDB:CLSZ2501118
Uniprot:Q55GQ9
Length = 1159
Score = 583 (210.3 bits), Expect = 1.0e-62, Sum P(3) = 1.0e-62
Identities = 129/278 (46%), Positives = 184/278 (66%)
Query: 167 VLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCP 226
V++ YQL+G+N++ +LY++ I G ILADEMGLGKT+Q I+ L +K ND GPHL+V P
Sbjct: 541 VMRNYQLIGLNWMAVLYKEKING-ILADEMGLGKTVQTISLLAHIKEAYNDNGPHLVVVP 599
Query: 227 ASVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLP-PPFNVLLVCYSLFER 285
A++L NWERE + WCPS S+++Y+G R EL K P FNV+L Y+L
Sbjct: 600 ATILANWEREFQTWCPSLSIVRYYGNLRER--EELRYELKKKRPGKDFNVILTTYNLLFA 657
Query: 286 HSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
++ DR LKR+ +S +++DEA +K+ +S R+KN+ + A+ RL+LTGTPLQN+
Sbjct: 658 NN-----DRGFLKRFDYSFLILDEAQNIKNSDSKRYKNIFKIG--AHHRLLLTGTPLQNN 710
Query: 346 LHELWSLLEFMMPDLFATEDVD---LKKLL--NGEDRD-LIGRMKSILGPFILRRLKSDV 399
L+ELWSLL F+MP +F + D L +LL NG+D D I RMK IL PFILRRLKS V
Sbjct: 711 LYELWSLLNFLMPHIFGSVKKDNYLLNQLLEYNGDDCDSAITRMKKILSPFILRRLKSTV 770
Query: 400 MQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRAR 437
++L PKI+ VE + + Q++ Y+ IE ++ + R
Sbjct: 771 SKELKPKIEHVEICKLPKFQDETYKNIIERSKSQWKLR 808
Score = 72 (30.4 bits), Expect = 1.0e-62, Sum P(3) = 1.0e-62
Identities = 12/29 (41%), Positives = 21/29 (72%)
Query: 458 ISNYFVQFRKIANHPLLVRRIYSDDDVVR 486
++N +Q RK ANHPLL + I+ +D+ ++
Sbjct: 895 LNNILMQLRKAANHPLLCKNIFYNDNQIQ 923
Score = 45 (20.9 bits), Expect = 1.0e-62, Sum P(3) = 1.0e-62
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 128 TTTSAACDRYAEVEASSVRIVTQSDIDDACGDEDSDFQ 165
TTT+ ++++S+ + DD CG E +F+
Sbjct: 296 TTTTTTTPTTPKIDSSTSTPSIEDGEDDLCGIEIEEFK 333
>UNIPROTKB|Q5FWR0 [details] [associations]
symbol:smarcad1 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A containing
DEAD/H box 1" species:8364 "Xenopus (Silurana) tropicalis"
[GO:0000729 "DNA double-strand break processing" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934
GO:GO:0000729 HOGENOM:HOG000172362 GO:GO:0035861 KO:K14439
HOVERGEN:HBG055804 OrthoDB:EOG4RV2QW EMBL:AAMC01061573
EMBL:AAMC01061574 EMBL:AAMC01061575 EMBL:BC089242
RefSeq:NP_001015697.1 UniGene:Str.34312 ProteinModelPortal:Q5FWR0
GeneID:548414 KEGG:xtr:548414 Xenbase:XB-GENE-492700
InParanoid:Q5FWR0 Uniprot:Q5FWR0
Length = 1003
Score = 566 (204.3 bits), Expect = 3.1e-57, Sum P(3) = 3.1e-57
Identities = 137/397 (34%), Positives = 222/397 (55%)
Query: 139 EVEASSVRIVTQSDIDDACG---DEDSDFQP--VLKPYQLVGVNFLLLLYRKGIAGAILA 193
E+ + + VTQ D CG ++ S VLKPYQ +G+N+L LL++ + ILA
Sbjct: 440 EISRTLTKQVTQLTEDGECGWNIEQPSIMSENLVLKPYQKIGLNWLALLHKHKV-NMILA 498
Query: 194 DEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPASVLENWERELKKWCPSFSVLQYHGAG 253
DEMGLGKT+QAI +L L ++ D GPHL+V PAS ++NW RE +WCPS ++L Y+G+
Sbjct: 499 DEMGLGKTVQAIAFLAHL-YVTGDSGPHLVVVPASTMDNWIREFNQWCPSMNILLYYGSQ 557
Query: 254 RTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHAL 313
L K FNV++ Y+ ++ +DR + +R + + + DE H L
Sbjct: 558 EERKHLRYDILNKV---VEFNVIVTTYNC----AISSAEDRSLFRRLKLNFAVFDEGHML 610
Query: 314 KDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSLLEFMMPDLFATEDVDLKKLLN 373
K+ ++ R+++LM++ NA RL+LTGTP+QN+L EL SLL F+MP +F++ ++K+L +
Sbjct: 611 KNMSAIRYQHLMTL--NARSRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIKRLFS 668
Query: 374 GE----------DRDLIGRMKSILGPFILRRLKSDVMQQLVPKIQWVEYVTMERPQEDAY 423
+ +++ I K I+ PFILRR+KS+V++QL PK +++ M + QE Y
Sbjct: 669 SKAKSTDEQTIFEKERIAHAKQIMKPFILRRVKSEVLKQLPPKQDKIKFCQMSKKQEQLY 728
Query: 424 RVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQISNYFVQFRKIANHPLLVRRIYSDDD 483
+ ++ K DA ++ N + RK+ANHPLL R+ Y+ D
Sbjct: 729 SDLLN--------KLKKSIDA-------TEKNSELCNVMMHLRKMANHPLLHRQYYTADR 773
Query: 484 VVRFAKKLHPMGAFGFECTLERVIEELKNYSDFSIHQ 520
+ R KL + + + E+++ +DF +H+
Sbjct: 774 L-RTMSKLMLKEPTHCDANPDLIFEDMEVMTDFELHR 809
Score = 38 (18.4 bits), Expect = 3.1e-57, Sum P(3) = 3.1e-57
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 9 SEISDEEWEPHSESFK 24
S +S+++WE S K
Sbjct: 212 SSLSEDDWEKQEASVK 227
Score = 38 (18.4 bits), Expect = 3.1e-57, Sum P(3) = 3.1e-57
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 108 VEALQKCAKISAELKRELYGTTTSAAC 134
++ + KC +IS L +++ T C
Sbjct: 432 MKLMNKCEEISRTLTKQVTQLTEDGEC 458
>UNIPROTKB|F1NAD2 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000018 "regulation of
DNA recombination" evidence=IEA] [GO:0000729 "DNA double-strand
break processing" evidence=IEA] [GO:0000792 "heterochromatin"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0035861
"site of double-strand break" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0043596
"nuclear replication fork" evidence=IEA] [GO:0051304 "chromosome
separation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0070933 "histone H4 deacetylation" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0000018 GeneTree:ENSGT00630000089890
GO:GO:0051304 OMA:KNQRGIQ EMBL:AADN02016061 EMBL:AADN02016062
EMBL:AADN02016063 EMBL:AADN02016064 EMBL:AADN02016065
EMBL:AADN02016066 EMBL:AADN02016067 IPI:IPI00583150
Ensembl:ENSGALT00000016936 Uniprot:F1NAD2
Length = 963
Score = 539 (194.8 bits), Expect = 5.3e-53, Sum P(2) = 5.3e-53
Identities = 128/362 (35%), Positives = 202/362 (55%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
LKPYQ +G+N+L LL++ G+ G ILADEMGLGKTIQAI +L + + D GPHLIV PA
Sbjct: 433 LKPYQKIGLNWLALLHKHGLNG-ILADEMGLGKTIQAIAFLAHI-YQEGDRGPHLIVVPA 490
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
S L+NW RE+ WCP +VL Y+ + + ++ + FNV++ Y+ +
Sbjct: 491 STLDNWIREVNLWCPELNVLFYYVGSQEDRKHLRADISNRVVD--FNVIVTTYNC----A 544
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
+ DDR + ++ + + + DE H LK+ +S R++ LM + NA RL+LTGTP+QN+L
Sbjct: 545 ISSSDDRSLFRKVKLNYAIFDEGHMLKNMSSVRYQQLMRI--NAKHRLLLTGTPVQNNLL 602
Query: 348 ELWSLLEFMMPDLFATEDVDLKKLLNGE----------DRDLIGRMKSILGPFILRRLKS 397
EL SLL F+MP +F++ +++++ + + +++ I K I+ PFILRR+K
Sbjct: 603 ELMSLLNFVMPHMFSSSTSEIRRMFSSKAKTAEEQSTYEKERIAHAKQIIKPFILRRVKD 662
Query: 398 DVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQ 457
+V++QL PK +E M QE Y + + + + K SD
Sbjct: 663 EVLKQLPPKKDHIELCAMSEKQEQLYCDLLNKLKKTMKGN-EKNSD-------------- 707
Query: 458 ISNYFVQFRKIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFECTLERVIEELKNYSDFS 517
+ N +Q RK+ANHPLL R Y+ D + + KL + + + E++ +DF
Sbjct: 708 MGNAMMQLRKMANHPLLHRHYYTADKL-KTMSKLMLKEPTHCDANPDLIFEDMTVMTDFE 766
Query: 518 IH 519
+H
Sbjct: 767 LH 768
Score = 43 (20.2 bits), Expect = 5.3e-53, Sum P(2) = 5.3e-53
Identities = 11/38 (28%), Positives = 21/38 (55%)
Query: 108 VEALQKCAKISAELKRELYGTTTSAACDRYAEVEASSV 145
++ + KC +IS +L +++ T C R+ +E SV
Sbjct: 391 LKLMNKCEEISNKLTKQVTKITEDGGC-RW-NIEQPSV 426
>UNIPROTKB|Q9H4L7 [details] [associations]
symbol:SMARCAD1 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A containing
DEAD/H box 1" species:9606 "Homo sapiens" [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0009117 "nucleotide metabolic process" evidence=NAS]
[GO:0003676 "nucleic acid binding" evidence=NAS] [GO:0016363
"nuclear matrix" evidence=NAS] [GO:0051260 "protein
homooligomerization" evidence=NAS] [GO:0000018 "regulation of DNA
recombination" evidence=IEP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0016568 "chromatin
modification" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003677 "DNA binding" evidence=IDA] [GO:0000729
"DNA double-strand break processing" evidence=IMP] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IMP] [GO:0035861
"site of double-strand break" evidence=IDA] [GO:0043596 "nuclear
replication fork" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=NAS] [GO:0051304 "chromosome separation" evidence=IMP]
[GO:0070932 "histone H3 deacetylation" evidence=IMP] [GO:0070933
"histone H4 deacetylation" evidence=IMP] [GO:0000792
"heterochromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR003892 InterPro:IPR009060
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0045893 GO:GO:0003677
GO:GO:0009117 GO:GO:0051260 GO:GO:0043596 GO:GO:0004386
GO:GO:0016363 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0000729 GO:GO:0000018
HOGENOM:HOG000172362 GO:GO:0035861 KO:K14439 GO:GO:0051304
OMA:KNQRGIQ EMBL:AY008271 EMBL:AB032948 EMBL:AK023990 EMBL:AK027490
EMBL:AK301668 EMBL:AC096746 EMBL:BC017953 EMBL:BC045534
EMBL:AL359929 EMBL:AL512768 IPI:IPI00008422 IPI:IPI00220119
RefSeq:NP_001121901.1 RefSeq:NP_001121902.1 RefSeq:NP_001241878.1
RefSeq:NP_064544.2 UniGene:Hs.410406 ProteinModelPortal:Q9H4L7
SMR:Q9H4L7 STRING:Q9H4L7 PhosphoSite:Q9H4L7 DMDM:306526240
PaxDb:Q9H4L7 PRIDE:Q9H4L7 DNASU:56916 Ensembl:ENST00000354268
Ensembl:ENST00000359052 Ensembl:ENST00000457823
Ensembl:ENST00000509418 GeneID:56916 KEGG:hsa:56916 UCSC:uc003htb.4
UCSC:uc003htc.4 CTD:56916 GeneCards:GC04P095128 H-InvDB:HIX0004380
HGNC:HGNC:18398 HPA:HPA016737 MIM:136000 MIM:612761
neXtProt:NX_Q9H4L7 Orphanet:289465 PharmGKB:PA134954731
HOVERGEN:HBG055804 ChiTaRS:SMARCAD1 GenomeRNAi:56916 NextBio:62407
ArrayExpress:Q9H4L7 Bgee:Q9H4L7 CleanEx:HS_SMARCAD1
Genevestigator:Q9H4L7 GermOnline:ENSG00000163104 Uniprot:Q9H4L7
Length = 1026
Score = 543 (196.2 bits), Expect = 1.3e-52, Sum P(2) = 1.3e-52
Identities = 128/362 (35%), Positives = 206/362 (56%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
LKPYQ VG+N+L L+++ G+ G ILADEMGLGKTIQAI +L L N+ GPHLIV PA
Sbjct: 497 LKPYQKVGLNWLALVHKHGLNG-ILADEMGLGKTIQAIAFLAYLYQEGNN-GPHLIVVPA 554
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
S ++NW RE+ WCP+ VL Y+G+ + ++ +NV++ Y+ +
Sbjct: 555 STIDNWLREVNLWCPTLKVLCYYGSQEERKQIRFNIHSRY---EDYNVIVTTYNC----A 607
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
+ DDR + +R + + + DE H LK+ S R+++LM++ NAN RL+LTGTP+QN+L
Sbjct: 608 ISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTI--NANNRLLLTGTPVQNNLL 665
Query: 348 ELWSLLEFMMPDLFATEDVDLKKLLNGE----------DRDLIGRMKSILGPFILRRLKS 397
EL SLL F+MP +F++ +++++ + + +++ I K I+ PFILRR+K
Sbjct: 666 ELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKERIAHAKQIIKPFILRRVKE 725
Query: 398 DVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQ 457
+V++QL PK +E M QE Y R+ K +I + +
Sbjct: 726 EVLKQLPPKKDRIELCAMSEKQEQLYLGLFN--------RLKK-------SINNLEKNTE 770
Query: 458 ISNYFVQFRKIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFECTLERVIEELKNYSDFS 517
+ N +Q RK+ANHPLL R+ Y+ + + ++ + E + + E+++ +DF
Sbjct: 771 MCNVMMQLRKMANHPLLHRQYYTAEKLKEMSQLMLKEPTH-CEANPDLIFEDMEVMTDFE 829
Query: 518 IH 519
+H
Sbjct: 830 LH 831
Score = 37 (18.1 bits), Expect = 1.3e-52, Sum P(2) = 1.3e-52
Identities = 12/57 (21%), Positives = 20/57 (35%)
Query: 2 KREYAEISEISDEEWEPHSESFKPSRVLKINTRSXXXXXXXXXXXXXXIESFAYNKD 58
K E + + E D E + FK R ++ S ++ +NKD
Sbjct: 62 KTEDSSVPETPDNERKASISYFKNQRGIQYIDLSSDSEDVVSPNCSNTVQEKTFNKD 118
>UNIPROTKB|E2RG62 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0070933 "histone H4 deacetylation"
evidence=IEA] [GO:0070932 "histone H3 deacetylation" evidence=IEA]
[GO:0051304 "chromosome separation" evidence=IEA] [GO:0043596
"nuclear replication fork" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035861 "site of
double-strand break" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000729 "DNA double-strand break processing" evidence=IEA]
[GO:0000018 "regulation of DNA recombination" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0000018
GeneTree:ENSGT00630000089890 GO:GO:0051304 EMBL:AAEX03016768
EMBL:AAEX03016769 Ensembl:ENSCAFT00000015951 Uniprot:E2RG62
Length = 1026
Score = 546 (197.3 bits), Expect = 8.7e-52, P = 8.7e-52
Identities = 129/362 (35%), Positives = 205/362 (56%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
LKPYQ VG+N+L L+++ G+ G ILADEMGLGKTIQAI +L L N GPHLIV PA
Sbjct: 497 LKPYQKVGLNWLALVHKHGLNG-ILADEMGLGKTIQAIAFLAYLYQEGNK-GPHLIVVPA 554
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
S ++NW RE+ WCP+ VL Y+G+ + +K +NV++ Y+ +
Sbjct: 555 STIDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSKY---EEYNVIVTTYNC----A 607
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
+ DDR + +R + + + DE H LK+ S R+++LM++ NAN RL+LTGTP+QN+L
Sbjct: 608 ISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTI--NANNRLLLTGTPVQNNLL 665
Query: 348 ELWSLLEFMMPDLFATEDVDLKKLLNGE----------DRDLIGRMKSILGPFILRRLKS 397
EL SLL F+MP +F++ +++++ + + +++ I K I+ PFILRR+K
Sbjct: 666 ELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKERIAHAKQIIKPFILRRVKE 725
Query: 398 DVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQ 457
+V++QL PK +E M QE Y R+ K +I + +
Sbjct: 726 EVLKQLPPKKDQIELCAMSEKQEQLYLGLFN--------RLKK-------SINNIEKSTE 770
Query: 458 ISNYFVQFRKIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFECTLERVIEELKNYSDFS 517
+ N +Q RK+ANHPLL R+ Y+ + + ++ + E + + E+++ +DF
Sbjct: 771 MCNVMMQLRKMANHPLLHRQYYTAEKLKEMSQLMLKEPTH-CEANPDLIFEDMEVMTDFE 829
Query: 518 IH 519
+H
Sbjct: 830 LH 831
>UNIPROTKB|J9NX47 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 GeneTree:ENSGT00630000089890
EMBL:AAEX03016768 EMBL:AAEX03016769 Ensembl:ENSCAFT00000044961
Uniprot:J9NX47
Length = 1026
Score = 546 (197.3 bits), Expect = 8.7e-52, P = 8.7e-52
Identities = 129/362 (35%), Positives = 205/362 (56%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
LKPYQ VG+N+L L+++ G+ G ILADEMGLGKTIQAI +L L N GPHLIV PA
Sbjct: 497 LKPYQKVGLNWLALVHKHGLNG-ILADEMGLGKTIQAIAFLAYLYQEGNK-GPHLIVVPA 554
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
S ++NW RE+ WCP+ VL Y+G+ + +K +NV++ Y+ +
Sbjct: 555 STIDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSKY---EEYNVIVTTYNC----A 607
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
+ DDR + +R + + + DE H LK+ S R+++LM++ NAN RL+LTGTP+QN+L
Sbjct: 608 ISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTI--NANNRLLLTGTPVQNNLL 665
Query: 348 ELWSLLEFMMPDLFATEDVDLKKLLNGE----------DRDLIGRMKSILGPFILRRLKS 397
EL SLL F+MP +F++ +++++ + + +++ I K I+ PFILRR+K
Sbjct: 666 ELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKERIAHAKQIIKPFILRRVKE 725
Query: 398 DVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQ 457
+V++QL PK +E M QE Y R+ K +I + +
Sbjct: 726 EVLKQLPPKKDQIELCAMSEKQEQLYLGLFN--------RLKK-------SINNIEKSTE 770
Query: 458 ISNYFVQFRKIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFECTLERVIEELKNYSDFS 517
+ N +Q RK+ANHPLL R+ Y+ + + ++ + E + + E+++ +DF
Sbjct: 771 MCNVMMQLRKMANHPLLHRQYYTAEKLKEMSQLMLKEPTH-CEANPDLIFEDMEVMTDFE 829
Query: 518 IH 519
+H
Sbjct: 830 LH 831
>UNIPROTKB|J9PA79 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 GeneTree:ENSGT00630000089890
OMA:KNQRGIQ EMBL:AAEX03016768 EMBL:AAEX03016769
Ensembl:ENSCAFT00000043847 Uniprot:J9PA79
Length = 1026
Score = 546 (197.3 bits), Expect = 8.7e-52, P = 8.7e-52
Identities = 129/362 (35%), Positives = 205/362 (56%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
LKPYQ VG+N+L L+++ G+ G ILADEMGLGKTIQAI +L L N GPHLIV PA
Sbjct: 497 LKPYQKVGLNWLALVHKHGLNG-ILADEMGLGKTIQAIAFLAYLYQEGNK-GPHLIVVPA 554
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
S ++NW RE+ WCP+ VL Y+G+ + +K +NV++ Y+ +
Sbjct: 555 STIDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSKY---EEYNVIVTTYNC----A 607
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
+ DDR + +R + + + DE H LK+ S R+++LM++ NAN RL+LTGTP+QN+L
Sbjct: 608 ISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTI--NANNRLLLTGTPVQNNLL 665
Query: 348 ELWSLLEFMMPDLFATEDVDLKKLLNGE----------DRDLIGRMKSILGPFILRRLKS 397
EL SLL F+MP +F++ +++++ + + +++ I K I+ PFILRR+K
Sbjct: 666 ELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKERIAHAKQIIKPFILRRVKE 725
Query: 398 DVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQ 457
+V++QL PK +E M QE Y R+ K +I + +
Sbjct: 726 EVLKQLPPKKDQIELCAMSEKQEQLYLGLFN--------RLKK-------SINNIEKSTE 770
Query: 458 ISNYFVQFRKIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFECTLERVIEELKNYSDFS 517
+ N +Q RK+ANHPLL R+ Y+ + + ++ + E + + E+++ +DF
Sbjct: 771 MCNVMMQLRKMANHPLLHRQYYTAEKLKEMSQLMLKEPTH-CEANPDLIFEDMEVMTDFE 829
Query: 518 IH 519
+H
Sbjct: 830 LH 831
>UNIPROTKB|F1RWW3 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0051304
"chromosome separation" evidence=IEA] [GO:0043596 "nuclear
replication fork" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035861 "site of
double-strand break" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000729 "DNA double-strand break processing" evidence=IEA]
[GO:0000018 "regulation of DNA recombination" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0000018
GeneTree:ENSGT00630000089890 GO:GO:0051304 OMA:KNQRGIQ
EMBL:CU951443 Ensembl:ENSSSCT00000010066 Uniprot:F1RWW3
Length = 1029
Score = 544 (196.6 bits), Expect = 1.5e-51, P = 1.5e-51
Identities = 129/362 (35%), Positives = 205/362 (56%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
LKPYQ VG+N+L L+++ G+ G ILADEMGLGKTIQAI +L L N GPHLIV PA
Sbjct: 500 LKPYQKVGLNWLALVHKHGLNG-ILADEMGLGKTIQAIAFLAYLYQEGNK-GPHLIVVPA 557
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
S ++NW RE+ WCP+ VL Y+G+ + +K +NV++ Y+ +
Sbjct: 558 STIDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSKY---EEYNVIVTTYNC----A 610
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
+ DDR + +R + + + DE H LK+ S R+++LM++ NAN RL+LTGTP+QN+L
Sbjct: 611 ISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTI--NANNRLLLTGTPVQNNLL 668
Query: 348 ELWSLLEFMMPDLFATEDVDLKKLLNGE----------DRDLIGRMKSILGPFILRRLKS 397
EL SLL F+MP +F++ +++++ + + +++ I K I+ PFILRR+K
Sbjct: 669 ELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKERIAHAKQIIKPFILRRVKE 728
Query: 398 DVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQ 457
+V++QL PK +E M QE Y R+ K +I + +
Sbjct: 729 EVLKQLPPKKDQIELCAMSEKQEQLYLGLFN--------RLKK-------SINNMEKNTE 773
Query: 458 ISNYFVQFRKIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFECTLERVIEELKNYSDFS 517
+ N +Q RK+ANHPLL R+ Y+ + + ++ + E + + E+++ +DF
Sbjct: 774 MCNVMMQLRKMANHPLLHRQYYTAEKLKEMSQLMLKEPTH-CEANPDLIFEDMEVMTDFE 832
Query: 518 IH 519
+H
Sbjct: 833 LH 834
>FB|FBgn0032157 [details] [associations]
symbol:Etl1 "Etl1 homologue" species:7227 "Drosophila
melanogaster" [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 EMBL:AE014134 GO:GO:0003677
GO:GO:0006281 GO:GO:0016568 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 KO:K14439
GeneTree:ENSGT00630000089890 OMA:KEERYMA EMBL:AY060597
RefSeq:NP_001033889.1 RefSeq:NP_001033890.1 RefSeq:NP_609320.2
UniGene:Dm.3953 ProteinModelPortal:Q9VL72 SMR:Q9VL72 IntAct:Q9VL72
STRING:Q9VL72 PRIDE:Q9VL72 EnsemblMetazoa:FBtr0079901 GeneID:34311
KEGG:dme:Dmel_CG5899 UCSC:CG5899-RA FlyBase:FBgn0032157
InParanoid:Q9VL72 PhylomeDB:Q9VL72 GenomeRNAi:34311 NextBio:787873
Bgee:Q9VL72 Uniprot:Q9VL72
Length = 844
Score = 539 (194.8 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 141/368 (38%), Positives = 208/368 (56%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L YQ++G+N+L +++++ + G ILADEMGLGKTIQ I +L LK HLIV P+
Sbjct: 289 LADYQIIGLNWLTVMHKQEMNG-ILADEMGLGKTIQVIAFLAYLKENGLSQAAHLIVVPS 347
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
S L+NWE E+ +WCP V +YHG+ + R AK G F+VLL Y H
Sbjct: 348 STLDNWEAEISRWCPELVVEKYHGS-QDERRRMRGRFAKDGFTG-FDVLLTTY-----HI 400
Query: 288 V-QQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDL 346
V ++RK+ + + V+ DEAH LK+ + R+ NL+++ NA R++LTGTPLQN+L
Sbjct: 401 VGSTPEERKMFRVCKLDYVIFDEAHMLKNMTTQRYANLITI--NARMRILLTGTPLQNNL 458
Query: 347 HELWSLLEFMMPDLFATEDVDLKKLL--NGE---DRDLIG--------RMKSILGPFILR 393
EL SLL F+MP FA D+K L G+ D+D + R K I+ PF+LR
Sbjct: 459 LELISLLCFVMPKFFAKSIEDIKSLFAKKGKSDGDQDEVSQFQETQIQRAKRIMKPFVLR 518
Query: 394 RLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVL 453
RLK DV++ L K+ VE V M Q+ Y ++ Y + ++ + S+ G+
Sbjct: 519 RLKKDVLKNLPKKLSLVEKVPMSSQQKIYYHELVDYY-SNNKGEVCSSSER-----AGIA 572
Query: 454 PQRQISNYFVQFRKIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFECTLERVI-EELKN 512
++ R+IANHPLL+R ++D ++ F+K+L A F+ T E+ I EEL
Sbjct: 573 -------IMMEMRRIANHPLLMRHYFTDANLRGFSKRL--ANASSFKKTNEQYIFEELAV 623
Query: 513 YSDFSIHQ 520
SDF ++Q
Sbjct: 624 MSDFQVYQ 631
>UNIPROTKB|E1B7X9 [details] [associations]
symbol:SMARCAD1 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A containing
DEAD/H box 1" species:9913 "Bos taurus" [GO:0035861 "site of
double-strand break" evidence=ISS] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=ISS] [GO:0000729 "DNA double-strand
break processing" evidence=ISS] [GO:0070933 "histone H4
deacetylation" evidence=ISS] [GO:0070932 "histone H3 deacetylation"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0000792
"heterochromatin" evidence=ISS] [GO:0051304 "chromosome separation"
evidence=ISS] [GO:0043596 "nuclear replication fork" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000018 "regulation of
DNA recombination" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934
GO:GO:0000792 GO:GO:0070932 GO:GO:0070933 GO:GO:0000729
GO:GO:0000018 GO:GO:0035861 GeneTree:ENSGT00630000089890
GO:GO:0051304 EMBL:DAAA02016925 EMBL:DAAA02016926 IPI:IPI00826348
UniGene:Bt.77636 Ensembl:ENSBTAT00000047936 OMA:KNQRGIQ
Uniprot:E1B7X9
Length = 1028
Score = 541 (195.5 bits), Expect = 3.1e-51, P = 3.1e-51
Identities = 128/362 (35%), Positives = 205/362 (56%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
LKPYQ VG+N+L L+++ G+ G ILADEMGLGKTIQAI +L L N GPHLIV PA
Sbjct: 499 LKPYQKVGLNWLALVHKHGLNG-ILADEMGLGKTIQAIAFLAYLYQEGNK-GPHLIVVPA 556
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
S ++NW RE+ WCP+ VL Y+G+ + ++ +NV++ Y+ +
Sbjct: 557 STIDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSRY---EEYNVIVTTYNC----A 609
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
+ DDR + +R + + + DE H LK+ S R+++LM++ NAN RL+LTGTP+QN+L
Sbjct: 610 ISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTI--NANNRLLLTGTPVQNNLL 667
Query: 348 ELWSLLEFMMPDLFATEDVDLKKLLNGE----------DRDLIGRMKSILGPFILRRLKS 397
EL SLL F+MP +F++ +++++ + + +++ I K I+ PFILRR+K
Sbjct: 668 ELMSLLNFVMPHMFSSSTSEIRRMFSSKTKPADEQSIYEKERIAHAKQIIKPFILRRVKE 727
Query: 398 DVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQ 457
+V++QL PK +E M QE Y R+ K +I + +
Sbjct: 728 EVLKQLPPKKDRIELCAMSEKQEQLYMNLFN--------RLKK-------SINNMEKNTE 772
Query: 458 ISNYFVQFRKIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFECTLERVIEELKNYSDFS 517
+ N +Q RK+ANHPLL R+ Y+ + + ++ + E + + E+++ +DF
Sbjct: 773 MCNVMMQLRKMANHPLLHRQYYTAEKLKEMSQLMLKEPTH-CEANPDLIFEDMEVMTDFE 831
Query: 518 IH 519
+H
Sbjct: 832 LH 833
>MGI|MGI:95453 [details] [associations]
symbol:Smarcad1 "SWI/SNF-related, matrix-associated
actin-dependent regulator of chromatin, subfamily a, containing
DEAD/H box 1" species:10090 "Mus musculus" [GO:0000018 "regulation
of DNA recombination" evidence=ISS] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000729 "DNA double-strand break
processing" evidence=ISO] [GO:0000792 "heterochromatin"
evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=ISO] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=ISO] [GO:0043596 "nuclear replication fork" evidence=ISO]
[GO:0051304 "chromosome separation" evidence=ISO] [GO:0070932
"histone H3 deacetylation" evidence=ISO] [GO:0070933 "histone H4
deacetylation" evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 MGI:MGI:95453 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0043596 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043044 GO:GO:0000792 GO:GO:0070932 GO:GO:0070933
GO:GO:0000729 GO:GO:0000018 HOGENOM:HOG000172362 GO:GO:0035861
KO:K14439 GeneTree:ENSGT00630000089890 GO:GO:0051304 OMA:KNQRGIQ
CTD:56916 HOVERGEN:HBG055804 EMBL:X69942 EMBL:AK122454
EMBL:BC042442 EMBL:AK134442 EMBL:AK147884 IPI:IPI00223926
IPI:IPI00556837 PIR:A56559 RefSeq:NP_001240321.1 RefSeq:NP_031984.1
UniGene:Mm.99113 ProteinModelPortal:Q04692 SMR:Q04692 STRING:Q04692
PhosphoSite:Q04692 PaxDb:Q04692 PRIDE:Q04692
Ensembl:ENSMUST00000031984 GeneID:13990 KEGG:mmu:13990
UCSC:uc009ced.1 UCSC:uc012emw.1 InParanoid:Q04692 OrthoDB:EOG4RV2QW
NextBio:284868 Bgee:Q04692 Genevestigator:Q04692
GermOnline:ENSMUSG00000029920 Uniprot:Q04692
Length = 1021
Score = 533 (192.7 bits), Expect = 2.2e-50, P = 2.2e-50
Identities = 128/362 (35%), Positives = 203/362 (56%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
LKPYQ VG+N+L L+++ G+ G ILADEMGLGKTIQAI +L L N GPHLIV PA
Sbjct: 492 LKPYQKVGLNWLALVHKHGLNG-ILADEMGLGKTIQAIAFLAYLFQEGNK-GPHLIVVPA 549
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
S ++NW RE+ WCPS +VL Y+G+ + K +NV++ Y+ +
Sbjct: 550 STIDNWLREVNLWCPSLNVLCYYGSQEERKQIRFNIHNKY---EDYNVIVTTYNC----A 602
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
+ DDR + +R + + + DE H LK+ S R+++LM++ NA RL+LTGTP+QN+L
Sbjct: 603 ISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTI--NARNRLLLTGTPVQNNLL 660
Query: 348 ELWSLLEFMMPDLFATEDVDLKKLLNGE----------DRDLIGRMKSILGPFILRRLKS 397
EL SLL F+MP +F++ +++++ + + +++ I K I+ PFILRR+K
Sbjct: 661 ELMSLLNFVMPHMFSSSTSEIRRMFSSKTKPADEQSIYEKERIAHAKQIIKPFILRRVKE 720
Query: 398 DVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQ 457
+V++ L PK +E M QE Y R+ K +I + +
Sbjct: 721 EVLKLLPPKKDRIELCAMSEKQEQLYSGLFN--------RLKK-------SINNLEKNTE 765
Query: 458 ISNYFVQFRKIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFECTLERVIEELKNYSDFS 517
+ N +Q RK+ANHPLL R+ Y+ + + ++ + E + + E+++ +DF
Sbjct: 766 MCNVMMQLRKMANHPLLHRQYYTPEKLKEMSQLMLKEPTH-CEANPDLIFEDMEVMTDFE 824
Query: 518 IH 519
+H
Sbjct: 825 LH 826
>RGD|1309640 [details] [associations]
symbol:Smarcad1 "SWI/SNF-related, matrix-associated
actin-dependent regulator of chromatin, subfamily a, containing
DEAD/H box 1`" species:10116 "Rattus norvegicus" [GO:0000018
"regulation of DNA recombination" evidence=IEA;ISO] [GO:0000729
"DNA double-strand break processing" evidence=ISO;ISS] [GO:0000792
"heterochromatin" evidence=ISO;ISS] [GO:0003677 "DNA binding"
evidence=IEA;ISO] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0035861 "site of double-strand break"
evidence=ISO;ISS] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=ISO;ISS] [GO:0043596 "nuclear replication fork"
evidence=IEA;ISO] [GO:0051304 "chromosome separation"
evidence=ISO;ISS] [GO:0070932 "histone H3 deacetylation"
evidence=ISO;ISS] [GO:0070933 "histone H4 deacetylation"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140 PROSITE:PS51194
SMART:SM00490 RGD:1309640 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0000729 GO:GO:0000018 GO:GO:0035861 KO:K14439
GeneTree:ENSGT00630000089890 GO:GO:0051304 OMA:KNQRGIQ CTD:56916
OrthoDB:EOG4RV2QW EMBL:AABR03032021 IPI:IPI00765483
RefSeq:NP_001101334.2 UniGene:Rn.7758 ProteinModelPortal:D3Z9Z9
Ensembl:ENSRNOT00000008585 GeneID:312398 KEGG:rno:312398
UCSC:RGD:1309640 Uniprot:D3Z9Z9
Length = 1024
Score = 530 (191.6 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 127/362 (35%), Positives = 203/362 (56%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
LKPYQ VG+N+L L+++ G+ G ILADEMGLGKTIQAI +L L N GPHLIV PA
Sbjct: 495 LKPYQKVGLNWLALVHKHGLNG-ILADEMGLGKTIQAIAFLAYLFQEGNK-GPHLIVVPA 552
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
S ++NW RE+ WCP+ +VL Y+G+ + K +NV++ Y+ +
Sbjct: 553 STIDNWLREVNLWCPTLNVLCYYGSQEERKQIRFNIHNKY---EDYNVIVTTYNC----A 605
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
+ DDR + +R + + + DE H LK+ S R+++LM++ NA RL+LTGTP+QN+L
Sbjct: 606 ISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTI--NARNRLLLTGTPVQNNLL 663
Query: 348 ELWSLLEFMMPDLFATEDVDLKKLLNGE----------DRDLIGRMKSILGPFILRRLKS 397
EL SLL F+MP +F++ +++++ + + +++ I K I+ PFILRR+K
Sbjct: 664 ELMSLLNFVMPHMFSSSTSEIRRMFSSKTKPADEQSIYEKERIAHAKQIIKPFILRRVKE 723
Query: 398 DVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQ 457
+V++ L PK +E M QE Y R+ K +I + +
Sbjct: 724 EVLKLLPPKKDQIELCAMSEKQEQLYSGLFN--------RLKK-------SINNLEKNTE 768
Query: 458 ISNYFVQFRKIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFECTLERVIEELKNYSDFS 517
+ N +Q RK+ANHPLL R+ Y+ + + ++ + E + + E+++ +DF
Sbjct: 769 MCNVMMQLRKMANHPLLHRQYYTAEKLKEMSQLMLKEPTH-CEANPDLIFEDMEVMTDFE 827
Query: 518 IH 519
+H
Sbjct: 828 LH 829
>ZFIN|ZDB-GENE-091113-61 [details] [associations]
symbol:si:dkey-76p7.6 "si:dkey-76p7.6" species:7955
"Danio rerio" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000729 "DNA double-strand break processing" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISS] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-091113-61 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934
GO:GO:0000729 GO:GO:0035861 GeneTree:ENSGT00630000089890
EMBL:BX927385 IPI:IPI00901431 Ensembl:ENSDART00000113101
Bgee:E7F1C4 Uniprot:E7F1C4
Length = 954
Score = 525 (189.9 bits), Expect = 1.2e-49, P = 1.2e-49
Identities = 135/354 (38%), Positives = 202/354 (57%)
Query: 104 HGDFVEALQKCAKISAELKRELYGTTTSAACDRYAEVEASSVRIVTQSDIDDACGDE--- 160
+G E L C ++ E RE+ S C+ E+ ++ VTQ +D G
Sbjct: 368 NGLSAELLAGCREVLKE--REVVKGLMSK-CE---EISVKLIQDVTQV-MDKGPGSMTQP 420
Query: 161 ---DSDFQPVLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNND 217
S FQ LKPYQL+G+N+L+LL++ ++G ILADEMGLGKTIQAI++L L N
Sbjct: 421 EILSSTFQ--LKPYQLIGLNWLVLLHQNKLSG-ILADEMGLGKTIQAISFLAHLYQEGNH 477
Query: 218 PGPHLIVCPASVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLL 277
GPHLI PAS L+NW REL WCPSF VL Y+G+ A R+ +N+++
Sbjct: 478 -GPHLITVPASTLDNWVRELNLWCPSFKVLVYYGS---ADDRKYMRYEILNQIVEYNIIV 533
Query: 278 VCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLML 337
Y+L ++ DR + + + + DE H LK+ NS R+++LM++ NA RL+L
Sbjct: 534 STYNL----AIGNSSDRSLFCKLKLEYAVFDEGHLLKNMNSLRYRHLMAI--NAKYRLLL 587
Query: 338 TGTPLQNDLHELWSLLEFMMPDLFATEDVDLKKLLNGE--------DRDLIGRMKSILGP 389
TGTPLQN+L EL SLL F+MP++F++ + K+ + + +RD I K I+ P
Sbjct: 588 TGTPLQNNLLELMSLLNFIMPNMFSSSTSQIAKMFSMKSSEEQSSFERDRITHAKLIMKP 647
Query: 390 FILRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSD 443
FILRR+KS+V++QL K + VE+ M Q++ Y + + + S +L++
Sbjct: 648 FILRRVKSEVLKQLPAKEEQVEFCAMSERQQELYSALLHKLKHSSNGEKRELTN 701
Score = 239 (89.2 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 66/251 (26%), Positives = 135/251 (53%)
Query: 273 FNVLLVCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNAN 332
+N+++ Y+L ++ DR + + + + DE H LK+ NS R+++LM++ NA
Sbjct: 529 YNIIVSTYNL----AIGNSSDRSLFCKLKLEYAVFDEGHLLKNMNSLRYRHLMAI--NAK 582
Query: 333 QRLMLTGTPLQNDLHELWSLLEFMMPDLFATEDVDLKKLLN---GEDRDLIGRMKSILGP 389
RL+LTGTPLQN+L EL SLL F+MP++F++ + K+ + E++ R +
Sbjct: 583 YRLLLTGTPLQNNLLELMSLLNFIMPNMFSSSTSQIAKMFSMKSSEEQSSFERDRITHAK 642
Query: 390 FILRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATI 449
I+ K +++++ K + ++ + + Q + ++ E + + A + KL +
Sbjct: 643 LIM---KPFILRRV--KSEVLKQLPAKEEQVEFCAMS-ERQQELYSALLHKLKHSSNGE- 695
Query: 450 VGVLPQRQISNYFVQFRKIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFECTLERVIEE 509
+R+++N +Q RK++NHPLL R+ Y+ + + +K + + + + E+
Sbjct: 696 -----KRELTNVMMQLRKMSNHPLLHRQFYTTEKLKAMSKLMLKEPSHR-DADPALIKED 749
Query: 510 LKNYSDFSIHQ 520
++ SDF +H+
Sbjct: 750 MEVLSDFELHR 760
>POMBASE|SPCC1235.05c [details] [associations]
symbol:fft2 "fun thirty related protein Fft2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000790
"nuclear chromatin" evidence=NAS] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISM;ISS] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=NAS]
[GO:0051276 "chromosome organization" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 PomBase:SPCC1235.05c GO:GO:0005829
GO:GO:0005524 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003677
GO:GO:0006338 GO:GO:0000790 GO:GO:0004003 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0016585 OrthoDB:EOG4BCHW4 PIR:T40879 RefSeq:NP_587731.1
ProteinModelPortal:O74842 STRING:O74842 EnsemblFungi:SPCC1235.05c.1
GeneID:2539045 KEGG:spo:SPCC1235.05c KO:K14439 NextBio:20800219
Uniprot:O74842
Length = 1284
Score = 523 (189.2 bits), Expect = 4.8e-49, P = 4.8e-49
Identities = 141/376 (37%), Positives = 217/376 (57%)
Query: 162 SDFQPVLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPH 221
SD Q LK YQLVGVN+L LLY++ ++G ILADEMGLGKT Q + + LL + GPH
Sbjct: 546 SDVQ--LKSYQLVGVNWLHLLYQQKLSG-ILADEMGLGKTCQVVAFFALLLEQGHH-GPH 601
Query: 222 LIVCPASVLENWERELKKWCPSFSVLQYHGAGRT-AYSRELSSLAKAGLPPPFNVLLVCY 280
L+V P+S LENW REL ++CPS V Y+G+ + A RE ++ + + +++L+ Y
Sbjct: 602 LVVVPSSTLENWLRELARFCPSLRVEPYYGSQQERANIRE--AIEENEIK--YDILVTTY 657
Query: 281 SLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGT 340
L + K+DR LK + + DE H LK++ S R+K+LM++ NAN RL+LTGT
Sbjct: 658 QL----ATNNKEDRSFLKHQNFDVCVYDEGHYLKNRMSERYKHLMNL--NANFRLLLTGT 711
Query: 341 PLQNDLHELWSLLEFMMPDLFATEDVDLKKLLNGE---DRDL---------IGRMKSILG 388
PLQN+L EL SLL F++P++F ++ DL + + D D+ I R K+++
Sbjct: 712 PLQNNLKELVSLLAFILPNMFDSDMDDLDVIFKAKPTADADIEQALLSKQRISRAKTMMT 771
Query: 389 PFILRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYR--VAIEEYRAVSRA-RIAKLSDAD 445
PF+LRR K+ V+ L K Q +E+ + Q + Y A+++ + + R + K S D
Sbjct: 772 PFVLRRRKNQVLNDLPKKTQIIEHCKLSENQLEIYNRYAALQKNQQLRRDDKRNKRSKND 831
Query: 446 LATIVGVLPQRQISNYFVQFRKIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFECTLER 505
+ L + +Q RK ANH LL R+ Y D+ + + AK + M ++ E+
Sbjct: 832 EESDGKSLSAGHV---LMQLRKAANHALLFRKFYDDEKLKQMAKDI--MQEEQYKNANEQ 886
Query: 506 VI-EELKNYSDFSIHQ 520
I E+++ SDF +H+
Sbjct: 887 YIYEDMEVMSDFELHR 902
>SGD|S000000017 [details] [associations]
symbol:FUN30 "Snf2p family member with ATP-dependent
chromatin remodeling activity" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0070870
"heterochromatin maintenance involved in chromatin silencing"
evidence=IGI;IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000729 "DNA double-strand break
processing" evidence=IMP] [GO:0031934 "mating-type region
heterochromatin" evidence=IPI] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IMP;IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IMP]
[GO:0000775 "chromosome, centromeric region" evidence=IDA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0000183 "chromatin
silencing at rDNA" evidence=IMP] [GO:0006348 "chromatin silencing
at telomere" evidence=IMP] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0070869 "heterochromatin assembly
involved in chromatin silencing" evidence=IMP] [GO:0006281 "DNA
repair" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
SGD:S000000017 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0000775 EMBL:L05146 EMBL:BK006935 GO:GO:0003677 GO:GO:0003682
GO:GO:0030466 GO:GO:0000183 GO:GO:0006348 GO:GO:0004386
GO:GO:0031934 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 GO:GO:0070869 GO:GO:0000729
GO:GO:0008094 OrthoDB:EOG4BCHW4 KO:K14439 HOGENOM:HOG000195581
PIR:S22266 RefSeq:NP_009383.1 ProteinModelPortal:P31380 SMR:P31380
DIP:DIP-2541N IntAct:P31380 MINT:MINT-425278 STRING:P31380
PaxDb:P31380 PeptideAtlas:P31380 EnsemblFungi:YAL019W GeneID:851214
KEGG:sce:YAL019W CYGD:YAL019w GeneTree:ENSGT00630000089890
OMA:KIEPYYG NextBio:968097 Genevestigator:P31380 GermOnline:YAL019W
GO:GO:0070870 Uniprot:P31380
Length = 1131
Score = 498 (180.4 bits), Expect = 1.8e-47, Sum P(2) = 1.8e-47
Identities = 130/370 (35%), Positives = 199/370 (53%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
LK YQ G+N+L LLY+ ++ ILAD+MGLGKT Q I++ LK +N +PGPHL+V P+
Sbjct: 572 LKDYQQTGINWLNLLYQNKMS-CILADDMGLGKTCQVISFFAYLKQIN-EPGPHLVVVPS 629
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
S LENW RE +K+ P+ + Y+G+ + EL + + ++V++ Y+L +
Sbjct: 630 STLENWLREFQKFAPALKIEPYYGSLQER--EELRDILERNAGK-YDVIVTTYNL----A 682
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
K D LK ++ V+ DE H LK+ S R+ LM + AN RL+LTGTPLQN+L
Sbjct: 683 AGNKYDVSFLKNRNFNVVVYDEGHMLKNSTSERFAKLMKI--RANFRLLLTGTPLQNNLK 740
Query: 348 ELWSLLEFMMPDLFATE----DVDLKKLLNGED----------RDLIGRMKSILGPFILR 393
EL SLLEF+MP+LF ++ D K+ D ++ I R K+++ PFILR
Sbjct: 741 ELMSLLEFIMPNLFISKKESFDAIFKQRAKTTDDNKNHNPLLAQEAITRAKTMMKPFILR 800
Query: 394 RLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADL---ATIV 450
R K V++ L PK ++Y + Q+ Y I+ + R+ K D +L A
Sbjct: 801 RRKDQVLKHLPPKHTHIQYCELNAIQKKIYDKEIQI--VLEHKRMIK--DGELPKDAKEK 856
Query: 451 GVLPQRQISNYFVQFRKIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFECTLERVIEEL 510
L N + RK + HPLL R IY+D + + + + A+ E + E++
Sbjct: 857 SKLQSSSSKNLIMALRKASLHPLLFRNIYNDKIITKMSDAILDEPAYAENGNKEYIKEDM 916
Query: 511 KNYSDFSIHQ 520
+DF +H+
Sbjct: 917 SYMTDFELHK 926
Score = 37 (18.1 bits), Expect = 1.8e-47, Sum P(2) = 1.8e-47
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 151 SDIDDACGDEDSDFQP 166
+D DDA GD+ ++ P
Sbjct: 260 TDDDDASGDDYTESTP 275
>ZFIN|ZDB-GENE-050522-499 [details] [associations]
symbol:smarcad1 "SWI/SNF-related, matrix-associated
actin-dependent regulator of chromatin, subfamily a, containing
DEAD/H box 1" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=ISS] [GO:0000729 "DNA double-strand break
processing" evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050522-499 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043044 SUPFAM:SSF46934 GO:GO:0000729 HOGENOM:HOG000172362
GO:GO:0035861 GeneTree:ENSGT00630000089890 OMA:KEERYMA
HOVERGEN:HBG055804 EMBL:AL807792 IPI:IPI00492619 UniGene:Dr.3950
ProteinModelPortal:B0R061 Ensembl:ENSDART00000091409
ArrayExpress:B0R061 Bgee:B0R061 Uniprot:B0R061
Length = 972
Score = 487 (176.5 bits), Expect = 4.5e-47, Sum P(2) = 4.5e-47
Identities = 120/337 (35%), Positives = 193/337 (57%)
Query: 134 CDRYAEVEASSVRIVTQSDIDDACGDEDSDFQPVLKPYQLVGVNFLLLLYRKGIAGAILA 193
C++ A+ V V ++ + + + L+ YQL+G+ +L+LL++ ++G ILA
Sbjct: 414 CEKIAQKMTKDVTQVIEAGMGSIKQPKVLNSNLKLQAYQLIGLKWLILLHQHKLSG-ILA 472
Query: 194 DEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPASVLENWERELKKWCPSFSVLQYHGAG 253
DEMGLGKTIQAI +L L + GPHLI P+S L+NW REL WCPS VL Y+G+
Sbjct: 473 DEMGLGKTIQAIAFLAHL-YEKGIKGPHLITVPSSTLDNWVRELGLWCPSLKVLIYYGSV 531
Query: 254 RTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHAL 313
+ L GL FN+++ Y+L ++ DR + ++ + + DE H L
Sbjct: 532 EDR--KYLRQDILTGLID-FNIIVSTYNL----TIGNDHDRSLFRKLKLKYAVFDEGHML 584
Query: 314 KDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSLLEFMMPDLFATEDVDLKKLLN 373
K+ NS R+++LM++ NA RL+LTGTPLQN+L EL SLL F+MP +F++ + K+ +
Sbjct: 585 KNMNSLRYRHLMTI--NAEHRLLLTGTPLQNNLLELMSLLNFIMPSMFSSSTSQISKMFS 642
Query: 374 ---GED-----RDLIGRMKSILGPFILRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRV 425
E+ +D I + + I+ PFILRR+KS+V+++L PK++ +E M Q Y +
Sbjct: 643 TRSSEEESSFHKDRIAQARLIMKPFILRRVKSEVLKELPPKMEKIEMCPMSDAQHKLYDI 702
Query: 426 AIEEYRAVSRARIAKLSDADLATIVGVLPQ-RQISNY 461
+ R+ K + D + V+ Q R+++N+
Sbjct: 703 LFK--------RLKKTPNGDKRELCNVMMQLRKMANH 731
Score = 254 (94.5 bits), Expect = 7.7e-18, Sum P(2) = 7.7e-18
Identities = 71/252 (28%), Positives = 132/252 (52%)
Query: 273 FNVLLVCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNAN 332
FN+++ Y+L ++ DR + ++ + + DE H LK+ NS R+++LM++ NA
Sbjct: 548 FNIIVSTYNL----TIGNDHDRSLFRKLKLKYAVFDEGHMLKNMNSLRYRHLMTI--NAE 601
Query: 333 QRLMLTGTPLQNDLHELWSLLEFMMPDLFATEDVDLKKLLN---GEDRDLIGRMKSILGP 389
RL+LTGTPLQN+L EL SLL F+MP +F++ + K+ + E+ + +
Sbjct: 602 HRLLLTGTPLQNNLLELMSLLNFIMPSMFSSSTSQISKMFSTRSSEEESSFHKDRIAQAR 661
Query: 390 FILRR-LKSDVMQQLVPKIQ-WVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLA 447
I++ + V +++ ++ +E + M P DA + Y + + R+ K + D
Sbjct: 662 LIMKPFILRRVKSEVLKELPPKMEKIEM-CPMSDAQH---KLYDILFK-RLKKTPNGD-- 714
Query: 448 TIVGVLPQRQISNYFVQFRKIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFECTLERVI 507
+R++ N +Q RK+ANHPLL R+ Y+ D + +K + ++ +
Sbjct: 715 -------KRELCNVMMQLRKMANHPLLHRQYYTSDKLAAMSKAMLKEPTH-YDADPALIQ 766
Query: 508 EELKNYSDFSIH 519
E+++ SDF +H
Sbjct: 767 EDMEVMSDFELH 778
Score = 41 (19.5 bits), Expect = 4.5e-47, Sum P(2) = 4.5e-47
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 139 EVEASSVRIVTQSDIDDACGDEDSD 163
+V AS SD+D D+DS+
Sbjct: 304 DVSASEDEDEIDSDVDSMSDDQDSE 328
>POMBASE|SPAC25A8.01c [details] [associations]
symbol:fft3 "fun thirty related protein Fft3"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0003677 "DNA binding" evidence=ISM]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IDA] [GO:0032017 "positive regulation of Ran
protein signal transduction" evidence=IGI] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC25A8.01c GO:GO:0005524 EMBL:CU329670
GO:GO:0003677 GO:GO:0006338 GO:GO:0000790 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0016585 GO:GO:0008094 OrthoDB:EOG4BCHW4 EMBL:AB027947
PIR:T38371 RefSeq:NP_593617.1 ProteinModelPortal:O42861
STRING:O42861 EnsemblFungi:SPAC25A8.01c.1 GeneID:2541531
KEGG:spo:SPAC25A8.01c HOGENOM:HOG000195581 OMA:NRASERY
NextBio:20802628 GO:GO:0032017 Uniprot:O42861
Length = 922
Score = 498 (180.4 bits), Expect = 9.2e-47, P = 9.2e-47
Identities = 141/436 (32%), Positives = 228/436 (52%)
Query: 108 VEAL-QKCAKISAELKR--ELYGTTTSAACDRYAEVEASSVRIVTQSDIDDACGDE---- 160
V+AL ++C ++ +++R E +G + +A D E E S V
Sbjct: 320 VDALIRQCEQLGGKIQRGIEAWGLSNTATSD---EGETSLVNFDQMKSFGTPANSSFITT 376
Query: 161 -DSDFQPVLK--PYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNND 217
+ F P +K YQ++G+N+L LLY +AG ILADEMGLGKT Q I + LL N +
Sbjct: 377 PPASFSPDIKLQDYQIIGINWLYLLYELKLAG-ILADEMGLGKTCQTIAFFSLLMDKNIN 435
Query: 218 PGPHLIVCPASVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLL 277
GPHL++ PAS +ENW RE K+CP + Y+G+ E+ + +NV+L
Sbjct: 436 -GPHLVIAPASTMENWLREFAKFCPKLKIELYYGS--QVEREEIRERINSN-KDSYNVML 491
Query: 278 VCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLML 337
Y L + K DR L+ +++ + DE H LK++ S R+++LMS+ A+ R++L
Sbjct: 492 TTYRL----AATSKADRLFLRNQKFNVCVYDEGHYLKNRASERYRHLMSIP--ADFRVLL 545
Query: 338 TGTPLQNDLHELWSLLEFMMPDLF--ATEDVD----LKKLLNGE-DRDL-----IGRMKS 385
TGTPLQN+L EL SLL F++P +F + +D +KK + +R L + R K
Sbjct: 546 TGTPLQNNLKELISLLAFILPHVFDYGLKSLDVIFTMKKSPESDFERALLSEQRVSRAKM 605
Query: 386 ILGPFILRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDAD 445
++ PF+LRR KS V+ L K + +E+ + Y + ++V+ + +
Sbjct: 606 MMAPFVLRRKKSQVLDALPKKTRIIEFCEFSEEERRRYDDFASK-QSVNSLLDENVMKTN 664
Query: 446 LATIVGVLPQRQISNY-FVQFRKIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFECTLE 504
L T + ++ + + VQ RK+A+HP+L R Y DD + + AK + M ++ E
Sbjct: 665 LDTNANLAKKKSTAGFVLVQLRKLADHPMLFRIHYKDDILRQMAKAI--MNEPQYKKANE 722
Query: 505 RVI-EELKNYSDFSIH 519
I E+++ SD +H
Sbjct: 723 LYIFEDMQYMSDIELH 738
>DICTYBASE|DDB_G0267638 [details] [associations]
symbol:DDB_G0267638 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 dictyBase:DDB_G0267638 GO:GO:0005524
GO:GO:0003677 EMBL:AAFI02000003 GO:GO:0003682 SUPFAM:SSF46689
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR014012 PROSITE:PS51204 KO:K11320 RefSeq:XP_647182.1
ProteinModelPortal:Q55GK2 EnsemblProtists:DDB0220518 GeneID:8615986
KEGG:ddi:DDB_G0267638 InParanoid:Q55GK2 OMA:ISFEAFA Uniprot:Q55GK2
Length = 3069
Score = 499 (180.7 bits), Expect = 7.0e-46, P = 7.0e-46
Identities = 122/319 (38%), Positives = 182/319 (57%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQ +G+++L+ LY K + G ILADEMGLGKTI I+ + L GPHLIV P+
Sbjct: 781 LREYQHIGLDWLVSLYEKNLNG-ILADEMGLGKTIMTISLIAYLAVQKGVWGPHLIVVPS 839
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
SVL NWE E K+WCP + YHG R + +K+ F+V + YS+
Sbjct: 840 SVLFNWEMEFKRWCPGLKIFTYHGTSRDRKANR-KGWSKSNA---FHVCITSYSMV---- 891
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
D I +R +W +++DEAH +K+ + RW+N++ N +RL+LTGTPLQN+L
Sbjct: 892 ---MSDHLIFRRKKWVYMILDEAHVIKNFKTQRWQNMLHF--NTERRLLLTGTPLQNNLM 946
Query: 348 ELWSLLEFMMPDLFAT--EDVD-----LKKLLNGED---RDLIGRMKSILGPFILRRLKS 397
ELWSL+ F+MPD+F + E D + ++ G D D+I R+ ++L PF+LRRLK
Sbjct: 947 ELWSLMHFLMPDIFQSHREFQDWFSNPVTGMIEGGDDVNEDIINRLHAVLRPFLLRRLKK 1006
Query: 398 DVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQ-R 456
DV +Q+ PK + +M R Q+ Y EE+ S + + LS +I+ +L Q R
Sbjct: 1007 DVEKQMPPKHTHIVPCSMSRRQKFLY----EEFINSSSTQ-STLSSGSFFSIINILMQLR 1061
Query: 457 QISNY--FVQFRKIANHPL 473
++ N+ + R I + PL
Sbjct: 1062 KVCNHPDLFEIRPIVS-PL 1079
>DICTYBASE|DDB_G0292358 [details] [associations]
symbol:ino80 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0031011 "Ino80 complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
dictyBase:DDB_G0292358 GO:GO:0005524 GenomeReviews:CM000155_GR
GO:GO:0003677 GO:GO:0006281 GO:GO:0016887 GO:GO:0006338
GO:GO:0006366 GO:GO:0031011 GO:GO:0004386 EMBL:AAFI02000189
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K11665 RefSeq:XP_629681.1 ProteinModelPortal:Q54DG0
STRING:Q54DG0 PRIDE:Q54DG0 EnsemblProtists:DDB0233012
GeneID:8628597 KEGG:ddi:DDB_G0292358 InParanoid:Q54DG0 OMA:MINILED
ProtClustDB:CLSZ2497087 Uniprot:Q54DG0
Length = 2129
Score = 485 (175.8 bits), Expect = 9.8e-46, Sum P(2) = 9.8e-46
Identities = 126/346 (36%), Positives = 182/346 (52%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
LKPYQL G+ +++ LY +GI G ILADEMGLGKTIQ+I L L N GP LIV P
Sbjct: 1162 LKPYQLKGMTWIVNLYDQGING-ILADEMGLGKTIQSIAVLAHLAEEKNIWGPFLIVTPK 1220
Query: 228 SVLENWERELKKWCPSFSVLQYHGAG--RTAYSRELSSLAKAGLPPPFNVLLVCYSLFER 285
S L NW+ E K+ P+F V+ Y G RT + + PF+VL+ Y++ R
Sbjct: 1221 STLHNWKNEFAKFVPAFKVIPYWGTQQQRTTIRKYWNPKKLYHRNSPFHVLITSYNVIVR 1280
Query: 286 HSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
D K R RW +++DEAHA+K S RWK LMS N RL+LTGTP+QN
Sbjct: 1281 -------DEKYFHRLRWQYMVLDEAHAIKSSASNRWKTLMSF--NCRNRLLLTGTPIQNS 1331
Query: 346 LHELWSLLEFMMP------DLFA---TEDVDLKKLLNGE-DRDLIGRMKSILGPFILRRL 395
+ ELW+LL F+MP D FA ++D++ + G + + R+ IL PF+LRR+
Sbjct: 1332 MAELWALLHFIMPTFFDSHDEFAEWFSKDIENHAMSQGGLNEHQLNRLHMILKPFMLRRI 1391
Query: 396 KSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQ 455
K DV ++ K + Y + Q+ Y+ +I S I +L + G +
Sbjct: 1392 KRDVENEMPSKTEVEVYCNLTHRQKKLYQ-SIR-----SNISITELLGGASFSEQGSM-- 1443
Query: 456 RQISNYFVQFRKIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFEC 501
+ + N+ +QFRK+ NHP +R + + + + P +C
Sbjct: 1444 KALMNFVMQFRKVCNHPETFKRSECESPFLFQVQTMEPQNTTSPQC 1489
Score = 43 (20.2 bits), Expect = 9.8e-46, Sum P(2) = 9.8e-46
Identities = 12/48 (25%), Positives = 23/48 (47%)
Query: 118 SAELKRELYGTTTSAACDRY-AEVEASSVRIVTQSDIDDACGDEDSDF 164
S+ ++ YG+++S+ +Y + +SS R I + D DF
Sbjct: 751 SSSRSKDRYGSSSSSKSSKYNSSSSSSSSRSKDNKYIRPSIFSSDDDF 798
Score = 38 (18.4 bits), Expect = 3.3e-45, Sum P(2) = 3.3e-45
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 108 VEALQKCAKISAELKREL 125
+ + C KI+ +KREL
Sbjct: 909 MNGIANCKKIAQMMKREL 926
>MGI|MGI:2444036 [details] [associations]
symbol:Srcap "Snf2-related CREBBP activator protein"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0043234 "protein complex" evidence=ISO] InterPro:IPR000330
Pfam:PF00176 MGI:MGI:2444036 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0043234 GO:GO:0003677 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427
EMBL:AC136146 EMBL:AC122417 IPI:IPI00988884
ProteinModelPortal:E9Q9V7 SMR:E9Q9V7 Ensembl:ENSMUST00000066582
OMA:VIQDHQA Bgee:E9Q9V7 Uniprot:E9Q9V7
Length = 936
Score = 473 (171.6 bits), Expect = 1.2e-45, Sum P(2) = 1.2e-45
Identities = 121/341 (35%), Positives = 194/341 (56%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQ +G+++L+ +Y K + G ILADEMGLGKTIQ I+ L L + GPHLI+ P
Sbjct: 610 LREYQHIGLDWLVTMYEKKLNG-ILADEMGLGKTIQTISLLAHLACEKGNWGPHLIIVPT 668
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
SV+ NWE ELK+WCPSF +L Y+GA + R+L + G P N VC + ++
Sbjct: 669 SVMLNWEMELKRWCPSFKILTYYGAQK---ERKLK---RQGWTKP-NAFHVCITSYKL-- 719
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
V Q D + +R W +++DEA +K+ S RW++L++ N+ +RL+LTGTPLQN L
Sbjct: 720 VLQ--DHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNF--NSQRRLLLTGTPLQNSLM 775
Query: 348 ELWSLLEFMMPDLFATE-------DVDLKKLLNGE---DRDLIGRMKSILGPFILRRLKS 397
ELWSL+ F+MP +F + L ++ G + L+ R+ +L PF+LRR+K
Sbjct: 776 ELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRPFLLRRVKV 835
Query: 398 DVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQ-R 456
DV +Q+ K + V + + Q Y +++ A + + L+ +++ +L Q R
Sbjct: 836 DVEKQMPKKYEHVIRCRLSKRQRCLY----DDFMAQTTTK-ETLATGHFMSVINILMQLR 890
Query: 457 QISNYFVQF--RKIANHPLLVRRI-YSDDDVVRFAKKLHPM 494
++ N+ F R + + P + I +S +V A ++HP+
Sbjct: 891 KVCNHPNLFDPRPVTS-PFITPGICFSTASLVLRATEVHPL 930
Score = 41 (19.5 bits), Expect = 1.2e-45, Sum P(2) = 1.2e-45
Identities = 7/8 (87%), Positives = 7/8 (87%)
Query: 159 DEDSDFQP 166
DED DFQP
Sbjct: 265 DEDGDFQP 272
Score = 37 (18.1 bits), Expect = 3.1e-45, Sum P(2) = 3.1e-45
Identities = 10/45 (22%), Positives = 22/45 (48%)
Query: 119 AELKRELYGTTTSAACDRYAEVEASSVRIVTQSDIDDACGDEDSD 163
+E + E+ ++ + E EA+ +QSD + C +++ D
Sbjct: 446 SEDEDEVEANSSDGELEETVE-EAAQEDSSSQSDSAEECSEDEED 489
>UNIPROTKB|G4NCV5 [details] [associations]
symbol:MGG_01012 "ISWI chromatin-remodeling complex ATPase
ISW2" species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 EMBL:CM001235 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
SUPFAM:SSF101224 RefSeq:XP_003717932.1 EnsemblFungi:MGG_01012T0
GeneID:2674262 KEGG:mgr:MGG_01012 Uniprot:G4NCV5
Length = 1128
Score = 490 (177.5 bits), Expect = 1.2e-45, P = 1.2e-45
Identities = 126/364 (34%), Positives = 201/364 (55%)
Query: 165 QPVLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIV 224
Q ++ YQ+ G+N+L+ L+ GI+G ILADEMGLGKT+Q I++L L+H+ GPHL++
Sbjct: 183 QGTMRDYQIAGLNWLISLHENGISG-ILADEMGLGKTLQTISFLGYLRHIMGITGPHLVI 241
Query: 225 CPASVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFE 284
P S L+NW+RE KW P +VL GA + +A+ + F+V + Y +
Sbjct: 242 VPKSTLDNWKREFGKWTPEVNVLVLQGAKE----ERAALIAERLVDESFDVCITSYEMIL 297
Query: 285 RHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVAR--NANQRLMLTGTPL 342
R ++ LK++ W +++DEAH +K++ S +L V R N+ RL++TGTPL
Sbjct: 298 R-------EKSHLKKFAWEYIIIDEAHRIKNEES----SLAQVIRLFNSRNRLLITGTPL 346
Query: 343 QNDLHELWSLLEFMMPDLFA-TEDVDLKKLLNGEDRD-LIGRMKSILGPFILRRLKSDVM 400
QN++HELW+LL F++PD+F +E D G+D D ++ ++ +L PF+LRR+K+DV
Sbjct: 347 QNNIHELWALLNFLLPDVFGDSEAFDQWFSGEGQDSDTVVQQLHRVLRPFLLRRVKADVE 406
Query: 401 QQLVPKIQWVEYVTMERPQEDAYRVAIE-EYRAVSRARIAKLSDADLATIVGVLPQRQIS 459
+ L+PK + Y+ M Q Y+ +E + AV+ A + S L IV L R+
Sbjct: 407 KSLLPKKEVNLYLKMTEMQRTWYQKILEKDIDAVNGANGKRESKTRLLNIVMQL--RKCC 464
Query: 460 NYFVQFRKIANHPLLV---RRIYSDDDVVRFAKKLHPMGAFGFECTL----ERVIEELKN 512
N+ F P +Y+ +V K L + A G + RV++ L++
Sbjct: 465 NHPYLFEGAEPGPPYTTDEHLVYNSGKMVVLDKLLKRLKAQGSRVLIFSQMSRVLDILED 524
Query: 513 YSDF 516
Y F
Sbjct: 525 YCVF 528
>UNIPROTKB|F6TQG2 [details] [associations]
symbol:SMARCA1 "Probable global transcription activator
SNF2L1" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 GO:GO:0003677 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 ChiTaRS:SMARCA1 SUPFAM:SSF101224
EMBL:AL138745 EMBL:AL022577 HGNC:HGNC:11097 IPI:IPI00647510
ProteinModelPortal:F6TQG2 SMR:F6TQG2 PRIDE:F6TQG2
Ensembl:ENST00000450039 ArrayExpress:F6TQG2 Bgee:F6TQG2
Uniprot:F6TQG2
Length = 1005
Score = 470 (170.5 bits), Expect = 4.9e-45, Sum P(2) = 4.9e-45
Identities = 103/263 (39%), Positives = 161/263 (61%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQ+ G+N+L+ LY G+ G ILADEMGLGKT+Q I L LKH N PGPH+++ P
Sbjct: 162 LRDYQIRGLNWLISLYENGVNG-ILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPK 220
Query: 228 SVLENWERELKKWCPSFSVLQYHGA--GRTAYSRELSSLAKAGLPPPFNVLLVCYSLFER 285
S L NW E K+W PS V+ + G R A+ R+ +P ++V + Y +
Sbjct: 221 STLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEM------MPGEWDVCVTSYEMV-- 272
Query: 286 HSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
+++K + K++ W +++DEAH +K++ S + ++ ++ N RL+LTGTPLQN+
Sbjct: 273 --IKEKS---VFKKFHWRYLVIDEAHRIKNEKS-KLSEIVREFKSTN-RLLLTGTPLQNN 325
Query: 346 LHELWSLLEFMMPDLFATED-----VDLKKLLNGEDRDLIGRMKSILGPFILRRLKSDVM 400
LHELW+LL F++PD+F + D D K L D+ L+ R+ ++L PF+LRR+K+DV
Sbjct: 326 LHELWALLNFLLPDVFNSADDFDSWFDTKNCLG--DQKLVERLHAVLKPFLLRRIKTDVE 383
Query: 401 QQLVPKIQWVEYVTMERPQEDAY 423
+ L PK + Y+ + + Q + Y
Sbjct: 384 KSLPPKKEIKIYLGLSKMQREWY 406
Score = 281 (104.0 bits), Expect = 2.3e-21, P = 2.3e-21
Identities = 67/202 (33%), Positives = 115/202 (56%)
Query: 278 VCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLML 337
VC + +E +++K + K++ W +++DEAH +K++ S + ++ ++ N RL+L
Sbjct: 264 VCVTSYEM-VIKEKS---VFKKFHWRYLVIDEAHRIKNEKS-KLSEIVREFKSTN-RLLL 317
Query: 338 TGTPLQNDLHELWSLLEFMMPDLFATED-----VDLKKLLNGEDRDLIGRMKSILGPFIL 392
TGTPLQN+LHELW+LL F++PD+F + D D K L D+ L+ R+ ++L PF+L
Sbjct: 318 TGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLG--DQKLVERLHAVLKPFLL 375
Query: 393 RRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGV 452
RR+K+DV + L PK + Y+ + + Q + Y + + D D+ G
Sbjct: 376 RRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKIL-------------MKDIDVLNSSGK 422
Query: 453 LPQRQISNYFVQFRKIANHPLL 474
+ + ++ N +Q RK NHP L
Sbjct: 423 MDKMRLLNILMQLRKCCNHPYL 444
Score = 40 (19.1 bits), Expect = 4.9e-45, Sum P(2) = 4.9e-45
Identities = 11/40 (27%), Positives = 17/40 (42%)
Query: 401 QQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAK 440
+Q + ++W+E ER A E VS +I K
Sbjct: 716 KQKLGMVEWIEPPKRERKANYAVDAYFREALRVSEPKIPK 755
>FB|FBgn0011604 [details] [associations]
symbol:Iswi "Imitation SWI" species:7227 "Drosophila
melanogaster" [GO:0006338 "chromatin remodeling"
evidence=ISS;NAS;TAS] [GO:0016589 "NURF complex"
evidence=NAS;IDA;TAS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IGI;IDA] [GO:0000166 "nucleotide binding"
evidence=TAS] [GO:0016584 "nucleosome positioning" evidence=IDA]
[GO:0006334 "nucleosome assembly" evidence=IDA] [GO:0016590 "ACF
complex" evidence=NAS;IDA;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IMP;IDA] [GO:0008623 "CHRAC"
evidence=NAS;IDA;TAS] [GO:0006333 "chromatin assembly or
disassembly" evidence=IDA;TAS] [GO:0042766 "nucleosome
mobilization" evidence=IDA;TAS] [GO:0016887 "ATPase activity"
evidence=NAS] [GO:0035060 "brahma complex" evidence=IDA]
[GO:0003678 "DNA helicase activity" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0006351 "transcription,
DNA-dependent" evidence=IDA] [GO:0005667 "transcription factor
complex" evidence=IPI] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035076 "ecdysone
receptor-mediated signaling pathway" evidence=IGI] [GO:0007517
"muscle organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0042752 "regulation of circadian
rhythm" evidence=IMP] [GO:0006325 "chromatin organization"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0031213 "RSF complex"
evidence=IPI] [GO:0005700 "polytene chromosome" evidence=IDA]
[GO:0070615 "nucleosome-dependent ATPase activity" evidence=IDA]
[GO:0035063 "nuclear speck organization" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 EMBL:AE013599 GO:GO:0005524
GO:GO:0045892 GO:GO:0003677 GO:GO:0045944 GO:GO:0006351
GO:GO:0042752 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0048813 GO:GO:0007517 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0005700 GO:GO:0035076 GO:GO:0042766 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0031491 GO:GO:0043044 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0016590 GO:GO:0008623 GO:GO:0008094
ChiTaRS:SMARCA1 GeneTree:ENSGT00680000100002 KO:K11654
SUPFAM:SSF101224 EMBL:L27127 EMBL:AY094908 EMBL:BT044562 PIR:A56533
RefSeq:NP_523719.1 RefSeq:NP_725203.1 RefSeq:NP_725204.1
UniGene:Dm.2581 PDB:1OFC PDBsum:1OFC ProteinModelPortal:Q24368
SMR:Q24368 DIP:DIP-24067N IntAct:Q24368 MINT:MINT-252539
STRING:Q24368 PaxDb:Q24368 PRIDE:Q24368 EnsemblMetazoa:FBtr0087841
EnsemblMetazoa:FBtr0087842 EnsemblMetazoa:FBtr0087843 GeneID:36390
KEGG:dme:Dmel_CG8625 CTD:36390 FlyBase:FBgn0011604
InParanoid:Q24368 OMA:EDYCHWR OrthoDB:EOG4M0CGK PhylomeDB:Q24368
EvolutionaryTrace:Q24368 GenomeRNAi:36390 NextBio:798287
Bgee:Q24368 GermOnline:CG8625 GO:GO:0031213 GO:GO:0070615
GO:GO:0035063 Uniprot:Q24368
Length = 1027
Score = 483 (175.1 bits), Expect = 5.4e-45, P = 5.4e-45
Identities = 108/282 (38%), Positives = 175/282 (62%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
++ YQ+ G+N+++ LY GI G ILADEMGLGKT+Q I+ L LKH N GPH+++ P
Sbjct: 128 MRDYQIRGLNWMISLYENGING-ILADEMGLGKTLQTISLLGYLKHFKNQAGPHIVIVPK 186
Query: 228 SVLENWERELKKWCPSFSVLQYHGAG--RTAYSRELSSLAKAGLPPPFNVLLVCYSLFER 285
S L+NW E KKWCPS + G R + R++ +P ++V + Y + R
Sbjct: 187 STLQNWVNEFKKWCPSLRAVCLIGDQDTRNTFIRDVL------MPGEWDVCVTSYEMCIR 240
Query: 286 HSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
++ + K++ W +++DEAH +K++ S + ++ + AN RL++TGTPLQN+
Sbjct: 241 -------EKSVFKKFNWRYLVIDEAHRIKNEKS-KLSEILREFKTAN-RLLITGTPLQNN 291
Query: 346 LHELWSLLEFMMPDLF-ATEDVDLKKLLN---GEDRDLIGRMKSILGPFILRRLKSDVMQ 401
LHELW+LL F++PD+F ++ED D N G+D LI R+ ++L PF+LRRLK++V +
Sbjct: 292 LHELWALLNFLLPDVFNSSEDFDEWFNTNTCLGDDA-LITRLHAVLKPFLLRRLKAEVEK 350
Query: 402 QLVPKIQWVEYVTMERPQEDAY-RVAIEEYRAVSRA-RIAKL 441
+L PK + +V + + Q D Y +V +++ V+ A ++ K+
Sbjct: 351 RLKPKKEMKIFVGLSKMQRDWYTKVLLKDIDVVNGAGKVEKM 392
Score = 293 (108.2 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 71/201 (35%), Positives = 118/201 (58%)
Query: 278 VCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLML 337
VC + +E +++K + K++ W +++DEAH +K++ S + ++ + AN RL++
Sbjct: 230 VCVTSYEM-CIREKS---VFKKFNWRYLVIDEAHRIKNEKS-KLSEILREFKTAN-RLLI 283
Query: 338 TGTPLQNDLHELWSLLEFMMPDLF-ATEDVDLKKLLN---GEDRDLIGRMKSILGPFILR 393
TGTPLQN+LHELW+LL F++PD+F ++ED D N G+D LI R+ ++L PF+LR
Sbjct: 284 TGTPLQNNLHELWALLNFLLPDVFNSSEDFDEWFNTNTCLGDDA-LITRLHAVLKPFLLR 342
Query: 394 RLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVL 453
RLK++V ++L PK + +V + + Q D Y + L D D+ G +
Sbjct: 343 RLKAEVEKRLKPKKEMKIFVGLSKMQRDWYTKVL-------------LKDIDVVNGAGKV 389
Query: 454 PQRQISNYFVQFRKIANHPLL 474
+ ++ N +Q RK NHP L
Sbjct: 390 EKMRLQNILMQLRKCTNHPYL 410
>CGD|CAL0000831 [details] [associations]
symbol:orf19.1734 species:5476 "Candida albicans" [GO:0031011
"Ino80 complex" evidence=IEA] [GO:0042766 "nucleosome mobilization"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0043486
"histone exchange" evidence=IEA] [GO:0006348 "chromatin silencing
at telomere" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043618 "regulation of transcription from RNA polymerase II
promoter in response to stress" evidence=IEA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF13892 PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
CGD:CAL0000831 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006281 GO:GO:0006351 GO:GO:0016568
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000298 EMBL:AACQ01000297
RefSeq:XP_710247.1 RefSeq:XP_710254.1 STRING:Q59KI4 GeneID:3648140
GeneID:3648148 KEGG:cal:CaO19.1734 KEGG:cal:CaO19.9302 KO:K11665
Uniprot:Q59KI4
Length = 1387
Score = 469 (170.2 bits), Expect = 6.0e-45, Sum P(2) = 6.0e-45
Identities = 120/326 (36%), Positives = 177/326 (54%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
LK YQL G+N+L LY +GI G ILADEMGLGKT+Q+I+ L L N GP L+V PA
Sbjct: 672 LKEYQLKGLNWLANLYEQGING-ILADEMGLGKTVQSISVLAYLAETYNMWGPFLVVTPA 730
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTA-YSREL---SSLAKAGLPPPFNVLLVCYSLF 283
S L NW++E+ K+ P F VL Y G + R+ SL + PF+VL+ Y L
Sbjct: 731 STLHNWQQEITKFVPEFKVLPYWGNAKDRKILRKFWDRKSL-RYDKDSPFHVLVTSYQLI 789
Query: 284 ERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQ 343
D ++ +W +++DEA A+K +S RWK+L+++ RL+LTGTP+Q
Sbjct: 790 VA-------DIAYFQKMKWQYMILDEAQAIKSSSSSRWKSLLNLT--CRNRLLLTGTPIQ 840
Query: 344 NDLHELWSLLEFMMPDLFATEDV-------DLKKLLNGE---DRDLIGRMKSILGPFILR 393
N + ELW+LL F+MP +F + D D++ D + R+ IL PF+LR
Sbjct: 841 NSMQELWALLHFIMPSIFDSHDEFSDWFAKDIESHAQSNTSLDEQQLRRLHMILKPFMLR 900
Query: 394 RLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVG-- 451
R+K +V +L K++ Y + Q+ Y+ R++I+ +SD DL +
Sbjct: 901 RIKKNVQSELGDKVEIDVYCDLTTRQKKLYQQL--------RSQIS-MSDTDLLELESNS 951
Query: 452 VLPQRQISNYFVQFRKIANHPLLVRR 477
++N +QFRK+ NHP L R
Sbjct: 952 TSSDSSLANLVMQFRKVCNHPDLFER 977
Score = 46 (21.3 bits), Expect = 6.0e-45, Sum P(2) = 6.0e-45
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 128 TTTSAACDRYAEVEASSVRIVTQSDIDDACGDEDS 162
+ T D+YA+V+ S+ + D D+ DE++
Sbjct: 577 SNTKEHLDKYADVDGSATHDINAVDFDN--DDEEA 609
>UNIPROTKB|P28370 [details] [associations]
symbol:SMARCA1 "Probable global transcription activator
SNF2L1" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016589 "NURF complex" evidence=IDA]
[GO:0036310 "annealing helicase activity" evidence=IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IDA] [GO:0070615
"nucleosome-dependent ATPase activity" evidence=IDA] [GO:0090537
"CERF complex" evidence=IDA] [GO:0030182 "neuron differentiation"
evidence=ISS] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA] [GO:0007420 "brain development" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IMP] [GO:0000733 "DNA strand renaturation" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0007420 GO:GO:0030182 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044
GO:GO:0016589 GO:GO:0036310 ChiTaRS:SMARCA1 SUPFAM:SSF101224
EMBL:AL138745 EMBL:M88163 EMBL:M89907 EMBL:AL022577 EMBL:BC117447
IPI:IPI00216046 IPI:IPI00646130 PIR:S35457 PIR:S35458
RefSeq:NP_003060.2 RefSeq:NP_620604.2 UniGene:Hs.152292
ProteinModelPortal:P28370 SMR:P28370 IntAct:P28370
MINT:MINT-2802155 STRING:P28370 PhosphoSite:P28370 DMDM:115311627
PaxDb:P28370 PRIDE:P28370 Ensembl:ENST00000371121
Ensembl:ENST00000371122 Ensembl:ENST00000371123 GeneID:6594
KEGG:hsa:6594 UCSC:uc004eun.4 UCSC:uc004eup.4 CTD:6594
GeneCards:GC0XM128580 HGNC:HGNC:11097 HPA:HPA003335 MIM:300012
neXtProt:NX_P28370 PharmGKB:PA35947 HOVERGEN:HBG056329
InParanoid:P28370 KO:K11727 OMA:PMSQKRK PhylomeDB:P28370
GenomeRNAi:6594 NextBio:25645 ArrayExpress:P28370 Bgee:P28370
CleanEx:HS_SMARCA1 Genevestigator:P28370 GermOnline:ENSG00000102038
Uniprot:P28370
Length = 1054
Score = 470 (170.5 bits), Expect = 6.2e-45, Sum P(2) = 6.2e-45
Identities = 103/263 (39%), Positives = 161/263 (61%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQ+ G+N+L+ LY G+ G ILADEMGLGKT+Q I L LKH N PGPH+++ P
Sbjct: 183 LRDYQIRGLNWLISLYENGVNG-ILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPK 241
Query: 228 SVLENWERELKKWCPSFSVLQYHGA--GRTAYSRELSSLAKAGLPPPFNVLLVCYSLFER 285
S L NW E K+W PS V+ + G R A+ R+ +P ++V + Y +
Sbjct: 242 STLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEM------MPGEWDVCVTSYEMV-- 293
Query: 286 HSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
+++K + K++ W +++DEAH +K++ S + ++ ++ N RL+LTGTPLQN+
Sbjct: 294 --IKEKS---VFKKFHWRYLVIDEAHRIKNEKS-KLSEIVREFKSTN-RLLLTGTPLQNN 346
Query: 346 LHELWSLLEFMMPDLFATED-----VDLKKLLNGEDRDLIGRMKSILGPFILRRLKSDVM 400
LHELW+LL F++PD+F + D D K L D+ L+ R+ ++L PF+LRR+K+DV
Sbjct: 347 LHELWALLNFLLPDVFNSADDFDSWFDTKNCLG--DQKLVERLHAVLKPFLLRRIKTDVE 404
Query: 401 QQLVPKIQWVEYVTMERPQEDAY 423
+ L PK + Y+ + + Q + Y
Sbjct: 405 KSLPPKKEIKIYLGLSKMQREWY 427
Score = 281 (104.0 bits), Expect = 2.5e-21, P = 2.5e-21
Identities = 67/202 (33%), Positives = 115/202 (56%)
Query: 278 VCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLML 337
VC + +E +++K + K++ W +++DEAH +K++ S + ++ ++ N RL+L
Sbjct: 285 VCVTSYEM-VIKEKS---VFKKFHWRYLVIDEAHRIKNEKS-KLSEIVREFKSTN-RLLL 338
Query: 338 TGTPLQNDLHELWSLLEFMMPDLFATED-----VDLKKLLNGEDRDLIGRMKSILGPFIL 392
TGTPLQN+LHELW+LL F++PD+F + D D K L D+ L+ R+ ++L PF+L
Sbjct: 339 TGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLG--DQKLVERLHAVLKPFLL 396
Query: 393 RRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGV 452
RR+K+DV + L PK + Y+ + + Q + Y + + D D+ G
Sbjct: 397 RRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKIL-------------MKDIDVLNSSGK 443
Query: 453 LPQRQISNYFVQFRKIANHPLL 474
+ + ++ N +Q RK NHP L
Sbjct: 444 MDKMRLLNILMQLRKCCNHPYL 465
Score = 40 (19.1 bits), Expect = 6.2e-45, Sum P(2) = 6.2e-45
Identities = 11/40 (27%), Positives = 17/40 (42%)
Query: 401 QQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAK 440
+Q + ++W+E ER A E VS +I K
Sbjct: 737 KQKLGMVEWIEPPKRERKANYAVDAYFREALRVSEPKIPK 776
>MGI|MGI:1935127 [details] [associations]
symbol:Smarca1 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000733 "DNA strand renaturation" evidence=ISO]
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006338 "chromatin
remodeling" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0007420 "brain
development" evidence=ISO;IMP] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016589 "NURF complex" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0036310 "annealing helicase activity" evidence=ISO] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISO] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0070615 "nucleosome-dependent ATPase activity" evidence=ISO]
[GO:0090537 "CERF complex" evidence=ISO] [GO:2000177 "regulation of
neural precursor cell proliferation" evidence=IGI;IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 MGI:MGI:1935127 GO:GO:0005524 GO:GO:0005634
GO:GO:0045893 GO:GO:0007420 GO:GO:0030182 GO:GO:0003677
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016589 GO:GO:0036310 GO:GO:0008094
GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862 SUPFAM:SSF101224
CTD:6594 HOVERGEN:HBG056329 KO:K11727 EMBL:AF325920 EMBL:AK030741
EMBL:AL671903 EMBL:BC057115 IPI:IPI00314654 IPI:IPI00761324
RefSeq:NP_444353.3 UniGene:Mm.229151 HSSP:Q24368
ProteinModelPortal:Q6PGB8 SMR:Q6PGB8 STRING:Q6PGB8
PhosphoSite:Q6PGB8 PaxDb:Q6PGB8 PRIDE:Q6PGB8
Ensembl:ENSMUST00000077569 Ensembl:ENSMUST00000088973
Ensembl:ENSMUST00000101616 GeneID:93761 KEGG:mmu:93761
UCSC:uc009tbl.2 UCSC:uc009tbm.2 InParanoid:B1AUP6 OrthoDB:EOG44J2H9
NextBio:351647 Bgee:Q6PGB8 Genevestigator:Q6PGB8
GermOnline:ENSMUSG00000031099 Uniprot:Q6PGB8
Length = 1046
Score = 468 (169.8 bits), Expect = 9.9e-45, Sum P(2) = 9.9e-45
Identities = 103/263 (39%), Positives = 161/263 (61%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQ+ G+N+L+ LY G+ G ILADEMGLGKT+Q I L LKH N PGPH+++ P
Sbjct: 187 LRDYQIRGLNWLISLYENGVNG-ILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPK 245
Query: 228 SVLENWERELKKWCPSFSVLQYHGAG--RTAYSRELSSLAKAGLPPPFNVLLVCYSLFER 285
S L NW E K+W PS V+ + G R A+ R+ +P ++V + Y +
Sbjct: 246 STLHNWMNEFKRWVPSLRVICFVGDKDVRAAFIRDEM------MPGEWDVCVTSYEMV-- 297
Query: 286 HSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
+++K + K++ W +++DEAH +K++ S + ++ ++ N RL+LTGTPLQN+
Sbjct: 298 --IKEKS---VFKKFHWRYLVIDEAHRIKNEKS-KLSEIVREFKSTN-RLLLTGTPLQNN 350
Query: 346 LHELWSLLEFMMPDLFATED-----VDLKKLLNGEDRDLIGRMKSILGPFILRRLKSDVM 400
LHELW+LL F++PD+F + D D K L D+ L+ R+ ++L PF+LRR+K+DV
Sbjct: 351 LHELWALLNFLLPDVFNSADDFDSWFDTKNCLG--DQKLVERLHAVLKPFLLRRIKTDVE 408
Query: 401 QQLVPKIQWVEYVTMERPQEDAY 423
+ L PK + Y+ + + Q + Y
Sbjct: 409 KSLPPKKEIKIYLGLSKMQREWY 431
Score = 281 (104.0 bits), Expect = 2.5e-21, P = 2.5e-21
Identities = 67/202 (33%), Positives = 115/202 (56%)
Query: 278 VCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLML 337
VC + +E +++K + K++ W +++DEAH +K++ S + ++ ++ N RL+L
Sbjct: 289 VCVTSYEM-VIKEKS---VFKKFHWRYLVIDEAHRIKNEKS-KLSEIVREFKSTN-RLLL 342
Query: 338 TGTPLQNDLHELWSLLEFMMPDLFATED-----VDLKKLLNGEDRDLIGRMKSILGPFIL 392
TGTPLQN+LHELW+LL F++PD+F + D D K L D+ L+ R+ ++L PF+L
Sbjct: 343 TGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLG--DQKLVERLHAVLKPFLL 400
Query: 393 RRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGV 452
RR+K+DV + L PK + Y+ + + Q + Y + + D D+ G
Sbjct: 401 RRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKIL-------------MKDIDVLNSSGK 447
Query: 453 LPQRQISNYFVQFRKIANHPLL 474
+ + ++ N +Q RK NHP L
Sbjct: 448 MDKMRLLNILMQLRKCCNHPYL 469
Score = 40 (19.1 bits), Expect = 9.9e-45, Sum P(2) = 9.9e-45
Identities = 11/40 (27%), Positives = 17/40 (42%)
Query: 401 QQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAK 440
+Q + ++W+E ER A E VS +I K
Sbjct: 729 KQKLGTVEWIEPPKRERKANYAVDAYFREALRVSEPKIPK 768
>RGD|1561046 [details] [associations]
symbol:Smarca1 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 1"
species:10116 "Rattus norvegicus" [GO:0000733 "DNA strand
renaturation" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=ISO] [GO:0007420 "brain development"
evidence=ISO] [GO:0016589 "NURF complex" evidence=ISO] [GO:0030182
"neuron differentiation" evidence=ISO] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0036310 "annealing helicase activity"
evidence=ISO] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0090537 "CERF
complex" evidence=ISO] [GO:2000177 "regulation of neural precursor
cell proliferation" evidence=ISO] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISO] [GO:0070615 "nucleosome-dependent ATPase
activity" evidence=ISO] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 RGD:1561046 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 IPI:IPI00947680
PRIDE:D3ZIE5 Ensembl:ENSRNOT00000068478 UCSC:RGD:1561046
ArrayExpress:D3ZIE5 Uniprot:D3ZIE5
Length = 1034
Score = 468 (169.8 bits), Expect = 1.2e-44, Sum P(2) = 1.2e-44
Identities = 103/263 (39%), Positives = 161/263 (61%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQ+ G+N+L+ LY G+ G ILADEMGLGKT+Q I L LKH N PGPH+++ P
Sbjct: 163 LRDYQIRGLNWLISLYENGVNG-ILADEMGLGKTLQTIALLGYLKHYRNFPGPHMVLVPK 221
Query: 228 SVLENWERELKKWCPSFSVLQYHGAG--RTAYSRELSSLAKAGLPPPFNVLLVCYSLFER 285
S L NW E K+W PS V+ + G R A+ R+ +P ++V + Y +
Sbjct: 222 STLHNWMNEFKRWVPSLRVICFVGDKDVRAAFIRDEM------MPGEWDVCVTSYEMV-- 273
Query: 286 HSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
+++K + K++ W +++DEAH +K++ S + ++ ++ N RL+LTGTPLQN+
Sbjct: 274 --IKEKS---VFKKFHWRYLVIDEAHRIKNEKS-KLSEIVREFKSTN-RLLLTGTPLQNN 326
Query: 346 LHELWSLLEFMMPDLFATED-----VDLKKLLNGEDRDLIGRMKSILGPFILRRLKSDVM 400
LHELW+LL F++PD+F + D D K L D+ L+ R+ ++L PF+LRR+K+DV
Sbjct: 327 LHELWALLNFLLPDVFNSADDFDSWFDTKNCLG--DQKLVERLHAVLKPFLLRRIKTDVE 384
Query: 401 QQLVPKIQWVEYVTMERPQEDAY 423
+ L PK + Y+ + + Q + Y
Sbjct: 385 KSLPPKKEIKIYLGLSKMQREWY 407
Score = 281 (104.0 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 67/202 (33%), Positives = 115/202 (56%)
Query: 278 VCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLML 337
VC + +E +++K + K++ W +++DEAH +K++ S + ++ ++ N RL+L
Sbjct: 265 VCVTSYEM-VIKEKS---VFKKFHWRYLVIDEAHRIKNEKS-KLSEIVREFKSTN-RLLL 318
Query: 338 TGTPLQNDLHELWSLLEFMMPDLFATED-----VDLKKLLNGEDRDLIGRMKSILGPFIL 392
TGTPLQN+LHELW+LL F++PD+F + D D K L D+ L+ R+ ++L PF+L
Sbjct: 319 TGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLG--DQKLVERLHAVLKPFLL 376
Query: 393 RRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGV 452
RR+K+DV + L PK + Y+ + + Q + Y + + D D+ G
Sbjct: 377 RRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKIL-------------MKDIDVLNSSGK 423
Query: 453 LPQRQISNYFVQFRKIANHPLL 474
+ + ++ N +Q RK NHP L
Sbjct: 424 MDKMRLLNILMQLRKCCNHPYL 445
Score = 39 (18.8 bits), Expect = 1.2e-44, Sum P(2) = 1.2e-44
Identities = 10/40 (25%), Positives = 17/40 (42%)
Query: 401 QQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAK 440
+Q + ++W+E ER A E VS ++ K
Sbjct: 717 KQKLGTVEWIEPPKRERKANYAVDAYFREALRVSEPKVPK 756
>UNIPROTKB|J9PA15 [details] [associations]
symbol:SRCAP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
Pfam:PF00176 GO:GO:0005524 GO:GO:0003677 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427
EMBL:AAEX03004381 EMBL:AAEX03004385 EMBL:AAEX03004386
EMBL:AAEX03004382 EMBL:AAEX03004383 EMBL:AAEX03004384
EMBL:AAEX03004387 EMBL:AAEX03004388 Ensembl:ENSCAFT00000048702
Uniprot:J9PA15
Length = 1555
Score = 471 (170.9 bits), Expect = 1.8e-44, Sum P(2) = 1.8e-44
Identities = 121/341 (35%), Positives = 193/341 (56%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQ +G+++L+ +Y K + G ILADEMGLGKTIQ I+ L L + GPHLI+ P
Sbjct: 624 LREYQHIGLDWLVTMYEKKLNG-ILADEMGLGKTIQTISLLAHLACEKGNWGPHLIIVPT 682
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
SV+ NWE ELK+WCPSF +L Y+GA + R+L + G P N VC + ++
Sbjct: 683 SVMLNWEMELKRWCPSFKILTYYGAQK---ERKLK---RQGWTKP-NAFHVCITSYKL-- 733
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
V Q D + +R W +++DEA +K+ S RW++L++ N+ +RL+LTGTPLQN L
Sbjct: 734 VLQ--DHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNF--NSQRRLLLTGTPLQNSLM 789
Query: 348 ELWSLLEFMMPDLFATE-------DVDLKKLLNGE---DRDLIGRMKSILGPFILRRLKS 397
ELWSL+ F+MP +F + L ++ G + L+ R+ +L PF+LRR+K
Sbjct: 790 ELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRPFLLRRVKV 849
Query: 398 DVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQ-R 456
DV +Q+ K + V + + Q Y +++ A + + L+ +++ +L Q R
Sbjct: 850 DVEKQMPKKYEHVIRCRLSKRQRCLY----DDFMAQTTTK-ETLATGHFMSVINILMQLR 904
Query: 457 QISNYFVQF--RKIANHPLLVRRI-YSDDDVVRFAKKLHPM 494
++ N+ F R + + P + I +S +V A +HP+
Sbjct: 905 KVCNHPNLFDPRPVTS-PFITPGICFSTASLVLRATDVHPL 944
Score = 41 (19.5 bits), Expect = 1.8e-44, Sum P(2) = 1.8e-44
Identities = 7/8 (87%), Positives = 7/8 (87%)
Query: 159 DEDSDFQP 166
DED DFQP
Sbjct: 284 DEDGDFQP 291
>UNIPROTKB|F1P0A4 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] InterPro:IPR000330
InterPro:IPR020838 Pfam:PF00176 Pfam:PF13892 GO:GO:0005524
GO:GO:0003677 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0016817 GeneTree:ENSGT00680000100002 EMBL:AADN02016239
EMBL:AADN02016240 IPI:IPI00819661 Ensembl:ENSGALT00000038610
ArrayExpress:F1P0A4 Uniprot:F1P0A4
Length = 469
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 112/301 (37%), Positives = 180/301 (59%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQ+ G+N+L+ LY GI G ILADEMGLGKT+Q I+ L +KH N PGPH+++ P
Sbjct: 165 LRDYQVRGLNWLISLYENGING-ILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPK 223
Query: 228 SVLENWERELKKWCPSFSVLQYHGAG--RTAYSRELSSLAKAGLPPPFNVLLVCYSLFER 285
S L NW E K+W P+ + G R A+ R++ LP ++V + Y +
Sbjct: 224 STLHNWMNEFKRWVPTLRAVCLIGDKDQRAAFVRDVL------LPGEWDVCVTSYEML-- 275
Query: 286 HSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
+++K + K++ W +++DEAH +K++ S + ++ + N RL+LTGTPLQN+
Sbjct: 276 --IKEKS---VFKKFNWRYLVIDEAHRIKNEKS-KLSEIVREFKTTN-RLLLTGTPLQNN 328
Query: 346 LHELWSLLEFMMPDLF-ATEDVDLKKLLNG--EDRDLIGRMKSILGPFILRRLKSDVMQQ 402
LHELW+LL F++PD+F ++ED D N D+ L+ R+ +L PF+LRR+K+DV +
Sbjct: 329 LHELWALLNFLLPDVFNSSEDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKADVEKS 388
Query: 403 LVPKIQWVEYVTMERPQEDAY-RVAIEEYRAVSRARIAKLSDADLATIVGVLPQ-RQISN 460
L PK + YV + + Q + Y R+ +++ ++ A KL D ++ +L Q R+ N
Sbjct: 389 LPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSA--GKL---DKMRLLNILMQLRKCCN 443
Query: 461 Y 461
+
Sbjct: 444 H 444
Score = 290 (107.1 bits), Expect = 2.7e-23, P = 2.7e-23
Identities = 71/200 (35%), Positives = 115/200 (57%)
Query: 278 VCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLML 337
VC + +E +++K + K++ W +++DEAH +K++ S + ++ + N RL+L
Sbjct: 267 VCVTSYEM-LIKEKS---VFKKFNWRYLVIDEAHRIKNEKS-KLSEIVREFKTTN-RLLL 320
Query: 338 TGTPLQNDLHELWSLLEFMMPDLF-ATEDVDLKKLLNG--EDRDLIGRMKSILGPFILRR 394
TGTPLQN+LHELW+LL F++PD+F ++ED D N D+ L+ R+ +L PF+LRR
Sbjct: 321 TGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRR 380
Query: 395 LKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLP 454
+K+DV + L PK + YV + + Q + Y RI + D D+ G L
Sbjct: 381 IKADVEKSLPPKKEVKIYVGLSKMQREWY------------TRIL-MKDIDILNSAGKLD 427
Query: 455 QRQISNYFVQFRKIANHPLL 474
+ ++ N +Q RK NHP L
Sbjct: 428 KMRLLNILMQLRKCCNHPYL 447
>UNIPROTKB|I3LTT5 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 EMBL:CU695129
Ensembl:ENSSSCT00000027860 Uniprot:I3LTT5
Length = 778
Score = 472 (171.2 bits), Expect = 2.9e-44, P = 2.9e-44
Identities = 110/303 (36%), Positives = 181/303 (59%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQ+ G+N+L+ LY G+ G ILADEMGLGKT+Q I L LKH N PGPH+++ P
Sbjct: 186 LRDYQIRGLNWLISLYENGVNG-ILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPK 244
Query: 228 SVLENWERELKKWCPSFSVLQYHGA--GRTAYSRELSSLAKAGLPPPFNVLLVCYSLFER 285
S L NW E K+W PS V+ + G R A+ R+ +P ++V + Y +
Sbjct: 245 STLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEM------MPGEWDVCVTSYEMV-- 296
Query: 286 HSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
+++K + K++ W +++DEAH +K++ S + ++ ++ N RL+LTGTPLQN+
Sbjct: 297 --IKEKS---VFKKFHWRYLVIDEAHRIKNEKS-KLSEIVREFKSTN-RLLLTGTPLQNN 349
Query: 346 LHELWSLLEFMMPDLFATED-----VDLKKLLNGEDRDLIGRMKSILGPFILRRLKSDVM 400
LHELW+LL F++PD+F + D D K L D+ L+ R+ ++L PF+LRR+K+DV
Sbjct: 350 LHELWALLNFLLPDVFNSADDFDSWFDTKNCLG--DQKLVERLHAVLKPFLLRRIKTDVE 407
Query: 401 QQLVPKIQWVEYVTMERPQEDAY-RVAIEEYRAVSRARIAKLSDADLATIVGVLPQ-RQI 458
+ L PK + Y+ + + Q + Y ++ +++ ++ A K+ D ++ +L Q R+
Sbjct: 408 KSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSA--GKM---DKMRLLNILMQLRKC 462
Query: 459 SNY 461
N+
Sbjct: 463 CNH 465
Score = 283 (104.7 bits), Expect = 8.8e-22, P = 8.8e-22
Identities = 67/202 (33%), Positives = 115/202 (56%)
Query: 278 VCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLML 337
VC + +E +++K + K++ W +++DEAH +K++ S + ++ ++ N RL+L
Sbjct: 288 VCVTSYEM-VIKEKS---VFKKFHWRYLVIDEAHRIKNEKS-KLSEIVREFKSTN-RLLL 341
Query: 338 TGTPLQNDLHELWSLLEFMMPDLFATED-----VDLKKLLNGEDRDLIGRMKSILGPFIL 392
TGTPLQN+LHELW+LL F++PD+F + D D K L D+ L+ R+ ++L PF+L
Sbjct: 342 TGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLG--DQKLVERLHAVLKPFLL 399
Query: 393 RRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGV 452
RR+K+DV + L PK + Y+ + + Q + Y + + D D+ G
Sbjct: 400 RRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKIL-------------MKDIDVLNSAGK 446
Query: 453 LPQRQISNYFVQFRKIANHPLL 474
+ + ++ N +Q RK NHP L
Sbjct: 447 MDKMRLLNILMQLRKCCNHPYL 468
>UNIPROTKB|E2QVR5 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 GO:GO:0003677 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224
Ensembl:ENSCAFT00000029649 Uniprot:E2QVR5
Length = 1073
Score = 465 (168.7 bits), Expect = 3.0e-44, Sum P(2) = 3.0e-44
Identities = 102/261 (39%), Positives = 160/261 (61%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQ+ G+N+L+ LY G+ G ILADEMGLGKT+Q I L LKH N PGPH+++ P
Sbjct: 195 LRDYQIRGLNWLISLYENGVNG-ILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPK 253
Query: 228 SVLENWERELKKWCPSFSVLQYHGA--GRTAYSRELSSLAKAGLPPPFNVLLVCYSLFER 285
S L NW E K+W PS V+ + G R A+ R+ +P ++V + Y +
Sbjct: 254 STLYNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEM------MPGEWDVCVTSYEMV-- 305
Query: 286 HSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
+++K + K++ W +++DEAH +K++ S + ++ ++ N RL+LTGTPLQN+
Sbjct: 306 --IKEKS---VFKKFHWRYLVIDEAHRIKNEKS-KLSEIVREFKSTN-RLLLTGTPLQNN 358
Query: 346 LHELWSLLEFMMPDLFATED-----VDLKKLLNGEDRDLIGRMKSILGPFILRRLKSDVM 400
LHELW+LL F++PD+F + D D K L D+ L+ R+ ++L PF+LRR+K+DV
Sbjct: 359 LHELWALLNFLLPDVFNSADDFDSWFDTKNCLG--DQKLVERLHAVLKPFLLRRIKTDVE 416
Query: 401 QQLVPKIQWVEYVTMERPQED 421
+ L PK + Y+ + + Q +
Sbjct: 417 KSLPPKKEIKVYLGLSKMQRE 437
Score = 282 (104.3 bits), Expect = 2.0e-21, P = 2.0e-21
Identities = 67/202 (33%), Positives = 115/202 (56%)
Query: 278 VCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLML 337
VC + +E +++K + K++ W +++DEAH +K++ S + ++ ++ N RL+L
Sbjct: 297 VCVTSYEM-VIKEKS---VFKKFHWRYLVIDEAHRIKNEKS-KLSEIVREFKSTN-RLLL 350
Query: 338 TGTPLQNDLHELWSLLEFMMPDLFATED-----VDLKKLLNGEDRDLIGRMKSILGPFIL 392
TGTPLQN+LHELW+LL F++PD+F + D D K L D+ L+ R+ ++L PF+L
Sbjct: 351 TGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLG--DQKLVERLHAVLKPFLL 408
Query: 393 RRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGV 452
RR+K+DV + L PK + Y+ + + Q + + I + D D+ G
Sbjct: 409 RRIKTDVEKSLPPKKEIKVYLGLSKMQREWWYTKI------------LMKDIDVLNSAGK 456
Query: 453 LPQRQISNYFVQFRKIANHPLL 474
+ + ++ N +Q RK NHP L
Sbjct: 457 MDKMRLLNILMQLRKCCNHPYL 478
Score = 39 (18.8 bits), Expect = 3.0e-44, Sum P(2) = 3.0e-44
Identities = 10/40 (25%), Positives = 17/40 (42%)
Query: 401 QQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAK 440
+Q + ++W+E ER A E VS ++ K
Sbjct: 740 KQKLGMVEWIEPPKRERKANYAVDAYFREALRVSEPKVPK 779
>UNIPROTKB|F6XTU7 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0031491 "nucleosome binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 GO:GO:0003677 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 GeneTree:ENSGT00680000100002
SUPFAM:SSF101224 OMA:PMSQKRK EMBL:AAEX03026896
Ensembl:ENSCAFT00000029649 Uniprot:F6XTU7
Length = 1075
Score = 465 (168.7 bits), Expect = 3.0e-44, Sum P(2) = 3.0e-44
Identities = 102/261 (39%), Positives = 160/261 (61%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQ+ G+N+L+ LY G+ G ILADEMGLGKT+Q I L LKH N PGPH+++ P
Sbjct: 183 LRDYQIRGLNWLISLYENGVNG-ILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPK 241
Query: 228 SVLENWERELKKWCPSFSVLQYHGA--GRTAYSRELSSLAKAGLPPPFNVLLVCYSLFER 285
S L NW E K+W PS V+ + G R A+ R+ +P ++V + Y +
Sbjct: 242 STLYNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEM------MPGEWDVCVTSYEMV-- 293
Query: 286 HSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
+++K + K++ W +++DEAH +K++ S + ++ ++ N RL+LTGTPLQN+
Sbjct: 294 --IKEKS---VFKKFHWRYLVIDEAHRIKNEKS-KLSEIVREFKSTN-RLLLTGTPLQNN 346
Query: 346 LHELWSLLEFMMPDLFATED-----VDLKKLLNGEDRDLIGRMKSILGPFILRRLKSDVM 400
LHELW+LL F++PD+F + D D K L D+ L+ R+ ++L PF+LRR+K+DV
Sbjct: 347 LHELWALLNFLLPDVFNSADDFDSWFDTKNCLG--DQKLVERLHAVLKPFLLRRIKTDVE 404
Query: 401 QQLVPKIQWVEYVTMERPQED 421
+ L PK + Y+ + + Q +
Sbjct: 405 KSLPPKKEIKVYLGLSKMQRE 425
Score = 39 (18.8 bits), Expect = 3.0e-44, Sum P(2) = 3.0e-44
Identities = 10/40 (25%), Positives = 17/40 (42%)
Query: 401 QQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAK 440
+Q + ++W+E ER A E VS ++ K
Sbjct: 742 KQKLGMVEWIEPPKRERKANYAVDAYFREALRVSEPKVPK 781
>UNIPROTKB|F6XHF3 [details] [associations]
symbol:SRCAP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
Pfam:PF00176 GO:GO:0005524 GO:GO:0003677 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427
EMBL:AAEX03004381 EMBL:AAEX03004385 EMBL:AAEX03004386
Ensembl:ENSCAFT00000026363 EMBL:AAEX03004382 EMBL:AAEX03004383
EMBL:AAEX03004384 EMBL:AAEX03004387 EMBL:AAEX03004388
Uniprot:F6XHF3
Length = 1823
Score = 471 (170.9 bits), Expect = 3.1e-44, Sum P(2) = 3.1e-44
Identities = 121/341 (35%), Positives = 193/341 (56%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQ +G+++L+ +Y K + G ILADEMGLGKTIQ I+ L L + GPHLI+ P
Sbjct: 624 LREYQHIGLDWLVTMYEKKLNG-ILADEMGLGKTIQTISLLAHLACEKGNWGPHLIIVPT 682
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
SV+ NWE ELK+WCPSF +L Y+GA + R+L + G P N VC + ++
Sbjct: 683 SVMLNWEMELKRWCPSFKILTYYGAQK---ERKLK---RQGWTKP-NAFHVCITSYKL-- 733
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
V Q D + +R W +++DEA +K+ S RW++L++ N+ +RL+LTGTPLQN L
Sbjct: 734 VLQ--DHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNF--NSQRRLLLTGTPLQNSLM 789
Query: 348 ELWSLLEFMMPDLFATE-------DVDLKKLLNGE---DRDLIGRMKSILGPFILRRLKS 397
ELWSL+ F+MP +F + L ++ G + L+ R+ +L PF+LRR+K
Sbjct: 790 ELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRPFLLRRVKV 849
Query: 398 DVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQ-R 456
DV +Q+ K + V + + Q Y +++ A + + L+ +++ +L Q R
Sbjct: 850 DVEKQMPKKYEHVIRCRLSKRQRCLY----DDFMAQTTTK-ETLATGHFMSVINILMQLR 904
Query: 457 QISNYFVQF--RKIANHPLLVRRI-YSDDDVVRFAKKLHPM 494
++ N+ F R + + P + I +S +V A +HP+
Sbjct: 905 KVCNHPNLFDPRPVTS-PFITPGICFSTASLVLRATDVHPL 944
Score = 41 (19.5 bits), Expect = 3.1e-44, Sum P(2) = 3.1e-44
Identities = 7/8 (87%), Positives = 7/8 (87%)
Query: 159 DEDSDFQP 166
DED DFQP
Sbjct: 284 DEDGDFQP 291
>UNIPROTKB|E2R6G6 [details] [associations]
symbol:SRCAP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
Pfam:PF00176 GO:GO:0005524 GO:GO:0003677 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 Ensembl:ENSCAFT00000026363
Uniprot:E2R6G6
Length = 1825
Score = 471 (170.9 bits), Expect = 3.1e-44, Sum P(2) = 3.1e-44
Identities = 121/341 (35%), Positives = 193/341 (56%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQ +G+++L+ +Y K + G ILADEMGLGKTIQ I+ L L + GPHLI+ P
Sbjct: 624 LREYQHIGLDWLVTMYEKKLNG-ILADEMGLGKTIQTISLLAHLACEKGNWGPHLIIVPT 682
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
SV+ NWE ELK+WCPSF +L Y+GA + R+L + G P N VC + ++
Sbjct: 683 SVMLNWEMELKRWCPSFKILTYYGAQK---ERKLK---RQGWTKP-NAFHVCITSYKL-- 733
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
V Q D + +R W +++DEA +K+ S RW++L++ N+ +RL+LTGTPLQN L
Sbjct: 734 VLQ--DHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNF--NSQRRLLLTGTPLQNSLM 789
Query: 348 ELWSLLEFMMPDLFATE-------DVDLKKLLNGE---DRDLIGRMKSILGPFILRRLKS 397
ELWSL+ F+MP +F + L ++ G + L+ R+ +L PF+LRR+K
Sbjct: 790 ELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRPFLLRRVKV 849
Query: 398 DVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQ-R 456
DV +Q+ K + V + + Q Y +++ A + + L+ +++ +L Q R
Sbjct: 850 DVEKQMPKKYEHVIRCRLSKRQRCLY----DDFMAQTTTK-ETLATGHFMSVINILMQLR 904
Query: 457 QISNYFVQF--RKIANHPLLVRRI-YSDDDVVRFAKKLHPM 494
++ N+ F R + + P + I +S +V A +HP+
Sbjct: 905 KVCNHPNLFDPRPVTS-PFITPGICFSTASLVLRATDVHPL 944
Score = 41 (19.5 bits), Expect = 3.1e-44, Sum P(2) = 3.1e-44
Identities = 7/8 (87%), Positives = 7/8 (87%)
Query: 159 DEDSDFQP 166
DED DFQP
Sbjct: 284 DEDGDFQP 291
>CGD|CAL0001763 [details] [associations]
symbol:orf19.1871 species:5476 "Candida albicans" [GO:0000812
"Swr1 complex" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
CGD:CAL0001763 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0016568 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
EMBL:AACQ01000133 EMBL:AACQ01000132 RefSeq:XP_713128.1
RefSeq:XP_713174.1 ProteinModelPortal:Q59U81 STRING:Q59U81
PRIDE:Q59U81 GeneID:3645174 GeneID:3645220 KEGG:cal:CaO19.1871
KEGG:cal:CaO19.9427 KO:K11681 Uniprot:Q59U81
Length = 1641
Score = 400 (145.9 bits), Expect = 3.4e-44, Sum P(2) = 3.4e-44
Identities = 98/226 (43%), Positives = 134/226 (59%)
Query: 135 DRYAEVEA--SSVRIVTQSDIDDACGDEDSDFQPVLKPYQLVGVNFLLLLYRKGIAGAIL 192
D+ A + S+V IV S + D S + L+PYQ G+N+L LY G IL
Sbjct: 790 DKIASTDEDDSNVEIVNGSKVKDV--PIPSLLRGTLRPYQKQGLNWLASLYNNNTNG-IL 846
Query: 193 ADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPASVLENWERELKKWCPSFSVLQYHGA 252
ADEMGLGKTIQ I+ L L ++ GPHLI+ P SV+ NWE E KK+ P F VL Y+G+
Sbjct: 847 ADEMGLGKTIQTISLLAYLACEHHKWGPHLIIVPTSVMLNWEMEFKKFAPGFKVLTYYGS 906
Query: 253 GRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHA 312
+ +++ K P F+V + Y L VQ D++ KR RW+ +++DEAH
Sbjct: 907 PQQR-AQKRKGWNK---PDAFHVCITSYQLV----VQ---DQQSFKRRRWTYMILDEAHN 955
Query: 313 LKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSLLEFMMP 358
+K+ S RW+ L++ N RL+LTGTPLQN+L ELWSLL F+MP
Sbjct: 956 IKNFRSTRWRALLNF--NTENRLLLTGTPLQNNLMELWSLLYFLMP 999
Score = 111 (44.1 bits), Expect = 3.4e-44, Sum P(2) = 3.4e-44
Identities = 32/115 (27%), Positives = 60/115 (52%)
Query: 359 DLFATEDVDLKKLLNGEDRDLIGRMKSILGPFILRRLKSDVMQQLVPKIQWVEYVTMERP 418
DL + +K+ + E R+ + R+ +L P++LRRLK DV +Q+ K + + Y + +
Sbjct: 1038 DLIDENERTTQKM-DEETRNTVARLHQVLRPYLLRRLKKDVEKQMPGKYEHIVYCRLSKR 1096
Query: 419 QEDAYRVAIEEYRAVSRARIAK-LSDADLATIVGVLPQRQISNYFVQFRKIANHP 472
Q Y +++ +SRA+ + L+ + +I+ N +Q RK+ NHP
Sbjct: 1097 QRFLY----DDF--MSRAKTKETLASGNFLSII---------NCLMQLRKVCNHP 1136
>TAIR|locus:2087780 [details] [associations]
symbol:PIE1 "PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0009910 "negative regulation of flower development"
evidence=IGI] [GO:0016514 "SWI/SNF complex" evidence=ISS]
[GO:0048441 "petal development" evidence=IGI] [GO:0048451 "petal
formation" evidence=IGI;RCA] [GO:0005618 "cell wall" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042742 "defense
response to bacterium" evidence=IGI;RCA] [GO:0046686 "response to
cadmium ion" evidence=IEP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0003002 "regionalization" evidence=RCA]
[GO:0006338 "chromatin remodeling" evidence=RCA] [GO:0007155 "cell
adhesion" evidence=RCA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0010090 "trichome morphogenesis"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0033043 "regulation of
organelle organization" evidence=RCA] [GO:0045010 "actin
nucleation" evidence=RCA] [GO:0048449 "floral organ formation"
evidence=RCA] [GO:0048453 "sepal formation" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005618
GO:GO:0046686 EMBL:CP002686 GO:GO:0003677 GO:GO:0042742
GO:GO:0003682 Gene3D:1.10.10.60 GO:GO:0016514 GO:GO:0004386
GO:GO:0009910 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 KO:K11320 GO:GO:0048451
EMBL:AY279398 IPI:IPI00545059 RefSeq:NP_187887.3 UniGene:At.39549
SMR:Q7X9V2 IntAct:Q7X9V2 STRING:Q7X9V2 EnsemblPlants:AT3G12810.1
GeneID:820463 KEGG:ath:AT3G12810 TAIR:At3g12810 InParanoid:Q7X9V2
OMA:CCHPPPS ProtClustDB:CLSN2680833 Genevestigator:Q7X9V2
Uniprot:Q7X9V2
Length = 2055
Score = 480 (174.0 bits), Expect = 4.2e-44, P = 4.2e-44
Identities = 118/308 (38%), Positives = 183/308 (59%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPG---PHLIV 224
L+ YQ +G+++L+ +Y K + G ILADEMGLGKTI I LL HL D G PHLIV
Sbjct: 536 LREYQHIGLDWLVTMYEKKLNG-ILADEMGLGKTIMTIA---LLAHLACDKGIWGPHLIV 591
Query: 225 CPASVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFE 284
P SV+ NWE E KWCP+F +L Y G+ + R+L L F+V + Y L
Sbjct: 592 VPTSVMLNWETEFLKWCPAFKILTYFGSAK---ERKLKRQGWMKLNS-FHVCITTYRLV- 646
Query: 285 RHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQN 344
+Q D K+ KR +W +++DEAH +K+ S RW+ L++ N+ +R++LTGTPLQN
Sbjct: 647 ---IQ---DSKMFKRKKWKYLILDEAHLIKNWKSQRWQTLLNF--NSKRRILLTGTPLQN 698
Query: 345 DLHELWSLLEFMMPDLFAT--EDVD-----LKKLLNGEDR---DLIGRMKSILGPFILRR 394
DL ELWSL+ F+MP +F + E D + ++ G+++ ++I R+ ++L PF+LRR
Sbjct: 699 DLMELWSLMHFLMPHVFQSHQEFKDWFCNPIAGMVEGQEKINKEVIDRLHNVLRPFLLRR 758
Query: 395 LKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLP 454
LK DV +QL K + V + + + Q + Y E++ A + + A L+ ++ ++
Sbjct: 759 LKRDVEKQLPSKHEHVIFCRLSKRQRNLY----EDFIASTETQ-ATLTSGSFFGMISIIM 813
Query: 455 Q-RQISNY 461
Q R++ N+
Sbjct: 814 QLRKVCNH 821
Score = 285 (105.4 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 76/223 (34%), Positives = 127/223 (56%)
Query: 274 NVLLVCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQ 333
N VC + + R +Q D K+ KR +W +++DEAH +K+ S RW+ L++ N+ +
Sbjct: 634 NSFHVCITTY-RLVIQ---DSKMFKRKKWKYLILDEAHLIKNWKSQRWQTLLNF--NSKR 687
Query: 334 RLMLTGTPLQNDLHELWSLLEFMMPDLFAT--EDVD-----LKKLLNGEDR---DLIGRM 383
R++LTGTPLQNDL ELWSL+ F+MP +F + E D + ++ G+++ ++I R+
Sbjct: 688 RILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKDWFCNPIAGMVEGQEKINKEVIDRL 747
Query: 384 KSILGPFILRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSD 443
++L PF+LRRLK DV +QL K + V + + + Q + Y E++ A + + A L+
Sbjct: 748 HNVLRPFLLRRLKRDVEKQLPSKHEHVIFCRLSKRQRNLY----EDFIASTETQ-ATLTS 802
Query: 444 ADLATIVGVLPQRQISNYFVQFRKIANHPLLV--RRIYSDDDV 484
++ ++ +Q RK+ NHP L R I S D+
Sbjct: 803 GSFFGMISII---------MQLRKVCNHPDLFEGRPIVSSFDM 836
>ZFIN|ZDB-GENE-021125-1 [details] [associations]
symbol:smarca5 "SWI/SNF related, matrix associated,
actin dependent regulator of chromatin, subfamily a, member 5"
species:7955 "Danio rerio" [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 ZFIN:ZDB-GENE-021125-1 GO:GO:0005524
GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0060041
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
SUPFAM:SSF101224 OMA:EDYCHWR HOVERGEN:HBG056329 EMBL:CU550733
IPI:IPI00619566 UniGene:Dr.76168 Ensembl:ENSDART00000123972
ArrayExpress:B8A552 Bgee:B8A552 Uniprot:B8A552
Length = 1035
Score = 474 (171.9 bits), Expect = 5.1e-44, P = 5.1e-44
Identities = 115/301 (38%), Positives = 183/301 (60%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQ+ G+N+L+ LY GI G ILADEMGLGKT+Q I+ L +KH N PGPH+++ P
Sbjct: 163 LRDYQVRGLNWLISLYENGING-ILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPK 221
Query: 228 SVLENWERELKKWCPSFSVLQYHG--AGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFER 285
S L NW E K+W PS + G RTA+ R+ +L LP ++V C + +E
Sbjct: 222 STLYNWMNEFKRWVPSLKAVCLIGDREERTAFIRD--TL----LPGEWDV---CVTSYEM 272
Query: 286 HSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
++ R + K++ W +++DEAH +K++ S + ++ + N RL+LTGTPLQN+
Sbjct: 273 LIIE----RAVFKKFNWRYLVIDEAHRIKNEKS-KLSEIVREFKTTN-RLLLTGTPLQNN 326
Query: 346 LHELWSLLEFMMPDLF-ATEDVDLKKLLNG--EDRDLIGRMKSILGPFILRRLKSDVMQQ 402
LHELW+LL F++PD+F ++ED D N D L+ R+ ++L PF+LRR+K+DV +
Sbjct: 327 LHELWALLNFLLPDVFNSSEDFDAWFDTNNCLGDTKLVERLHTVLRPFLLRRIKADVEKS 386
Query: 403 LVPKIQWVEYVTMERPQEDAY-RVAIEEYRAVSRARIAKLSDADLATIVGVLPQ-RQISN 460
L+PK + YV + + Q + Y ++ +++ ++ A K+ D ++ VL Q R+ N
Sbjct: 387 LLPKKEIKIYVGLSKMQREWYTKILMKDIDILNSA--GKM---DKMRLLNVLMQLRKCCN 441
Query: 461 Y 461
+
Sbjct: 442 H 442
Score = 291 (107.5 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 68/200 (34%), Positives = 114/200 (57%)
Query: 278 VCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLML 337
VC + +E ++ R + K++ W +++DEAH +K++ S + ++ + N RL+L
Sbjct: 265 VCVTSYEMLIIE----RAVFKKFNWRYLVIDEAHRIKNEKS-KLSEIVREFKTTN-RLLL 318
Query: 338 TGTPLQNDLHELWSLLEFMMPDLF-ATEDVDLKKLLNG--EDRDLIGRMKSILGPFILRR 394
TGTPLQN+LHELW+LL F++PD+F ++ED D N D L+ R+ ++L PF+LRR
Sbjct: 319 TGTPLQNNLHELWALLNFLLPDVFNSSEDFDAWFDTNNCLGDTKLVERLHTVLRPFLLRR 378
Query: 395 LKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLP 454
+K+DV + L+PK + YV + + Q + Y + + D D+ G +
Sbjct: 379 IKADVEKSLLPKKEIKIYVGLSKMQREWYTKIL-------------MKDIDILNSAGKMD 425
Query: 455 QRQISNYFVQFRKIANHPLL 474
+ ++ N +Q RK NHP L
Sbjct: 426 KMRLLNVLMQLRKCCNHPYL 445
>UNIPROTKB|G3N326 [details] [associations]
symbol:LOC788113 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000330 Pfam:PF00176
GO:GO:0005524 GO:GO:0003677 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GeneTree:ENSGT00530000063427 EMBL:DAAA02057908
Ensembl:ENSBTAT00000063921 Uniprot:G3N326
Length = 934
Score = 471 (170.9 bits), Expect = 8.0e-44, P = 8.0e-44
Identities = 121/341 (35%), Positives = 193/341 (56%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQ +G+++L+ +Y K + G ILADEMGLGKTIQ I+ L L + GPHLI+ P
Sbjct: 608 LREYQHIGLDWLVTMYEKKLNG-ILADEMGLGKTIQTISLLAHLACEKGNWGPHLIIVPT 666
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
SV+ NWE ELK+WCPSF +L Y+GA + R+L + G P N VC + ++
Sbjct: 667 SVMLNWEMELKRWCPSFKILTYYGAQK---ERKLK---RQGWTKP-NAFHVCITSYKL-- 717
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
V Q D + +R W +++DEA +K+ S RW++L++ N+ +RL+LTGTPLQN L
Sbjct: 718 VLQ--DHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNF--NSQRRLLLTGTPLQNSLM 773
Query: 348 ELWSLLEFMMPDLFATE-------DVDLKKLLNGE---DRDLIGRMKSILGPFILRRLKS 397
ELWSL+ F+MP +F + L ++ G + L+ R+ +L PF+LRR+K
Sbjct: 774 ELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRPFLLRRVKV 833
Query: 398 DVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQ-R 456
DV +Q+ K + V + + Q Y +++ A + + L+ +++ +L Q R
Sbjct: 834 DVEKQMPKKYEHVIRCRLSKRQRCLY----DDFMAQTTTK-ETLATGHFMSVINILMQLR 888
Query: 457 QISNYFVQF--RKIANHPLLVRRI-YSDDDVVRFAKKLHPM 494
++ N+ F R + + P + I +S +V A +HP+
Sbjct: 889 KVCNHPNLFDPRPVTS-PFITPGICFSTASLVLRATDVHPL 928
>UNIPROTKB|K7GMM0 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
GeneID:100188905 RefSeq:XP_003360491.1 Ensembl:ENSSSCT00000034062
Uniprot:K7GMM0
Length = 1057
Score = 472 (171.2 bits), Expect = 8.9e-44, P = 8.9e-44
Identities = 110/303 (36%), Positives = 181/303 (59%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQ+ G+N+L+ LY G+ G ILADEMGLGKT+Q I L LKH N PGPH+++ P
Sbjct: 186 LRDYQIRGLNWLISLYENGVNG-ILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPK 244
Query: 228 SVLENWERELKKWCPSFSVLQYHGA--GRTAYSRELSSLAKAGLPPPFNVLLVCYSLFER 285
S L NW E K+W PS V+ + G R A+ R+ +P ++V + Y +
Sbjct: 245 STLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEM------MPGEWDVCVTSYEMV-- 296
Query: 286 HSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
+++K + K++ W +++DEAH +K++ S + ++ ++ N RL+LTGTPLQN+
Sbjct: 297 --IKEKS---VFKKFHWRYLVIDEAHRIKNEKS-KLSEIVREFKSTN-RLLLTGTPLQNN 349
Query: 346 LHELWSLLEFMMPDLFATED-----VDLKKLLNGEDRDLIGRMKSILGPFILRRLKSDVM 400
LHELW+LL F++PD+F + D D K L D+ L+ R+ ++L PF+LRR+K+DV
Sbjct: 350 LHELWALLNFLLPDVFNSADDFDSWFDTKNCLG--DQKLVERLHAVLKPFLLRRIKTDVE 407
Query: 401 QQLVPKIQWVEYVTMERPQEDAY-RVAIEEYRAVSRARIAKLSDADLATIVGVLPQ-RQI 458
+ L PK + Y+ + + Q + Y ++ +++ ++ A K+ D ++ +L Q R+
Sbjct: 408 KSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSA--GKM---DKMRLLNILMQLRKC 462
Query: 459 SNY 461
N+
Sbjct: 463 CNH 465
Score = 283 (104.7 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 67/202 (33%), Positives = 115/202 (56%)
Query: 278 VCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLML 337
VC + +E +++K + K++ W +++DEAH +K++ S + ++ ++ N RL+L
Sbjct: 288 VCVTSYEM-VIKEKS---VFKKFHWRYLVIDEAHRIKNEKS-KLSEIVREFKSTN-RLLL 341
Query: 338 TGTPLQNDLHELWSLLEFMMPDLFATED-----VDLKKLLNGEDRDLIGRMKSILGPFIL 392
TGTPLQN+LHELW+LL F++PD+F + D D K L D+ L+ R+ ++L PF+L
Sbjct: 342 TGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLG--DQKLVERLHAVLKPFLL 399
Query: 393 RRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGV 452
RR+K+DV + L PK + Y+ + + Q + Y + + D D+ G
Sbjct: 400 RRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKIL-------------MKDIDVLNSAGK 446
Query: 453 LPQRQISNYFVQFRKIANHPLL 474
+ + ++ N +Q RK NHP L
Sbjct: 447 MDKMRLLNILMQLRKCCNHPYL 468
>UNIPROTKB|K7GNV1 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
GeneID:100188905 RefSeq:XP_003360492.1 Ensembl:ENSSSCT00000032734
Uniprot:K7GNV1
Length = 1061
Score = 472 (171.2 bits), Expect = 9.0e-44, P = 9.0e-44
Identities = 110/303 (36%), Positives = 181/303 (59%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQ+ G+N+L+ LY G+ G ILADEMGLGKT+Q I L LKH N PGPH+++ P
Sbjct: 186 LRDYQIRGLNWLISLYENGVNG-ILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPK 244
Query: 228 SVLENWERELKKWCPSFSVLQYHGA--GRTAYSRELSSLAKAGLPPPFNVLLVCYSLFER 285
S L NW E K+W PS V+ + G R A+ R+ +P ++V + Y +
Sbjct: 245 STLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEM------MPGEWDVCVTSYEMV-- 296
Query: 286 HSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
+++K + K++ W +++DEAH +K++ S + ++ ++ N RL+LTGTPLQN+
Sbjct: 297 --IKEKS---VFKKFHWRYLVIDEAHRIKNEKS-KLSEIVREFKSTN-RLLLTGTPLQNN 349
Query: 346 LHELWSLLEFMMPDLFATED-----VDLKKLLNGEDRDLIGRMKSILGPFILRRLKSDVM 400
LHELW+LL F++PD+F + D D K L D+ L+ R+ ++L PF+LRR+K+DV
Sbjct: 350 LHELWALLNFLLPDVFNSADDFDSWFDTKNCLG--DQKLVERLHAVLKPFLLRRIKTDVE 407
Query: 401 QQLVPKIQWVEYVTMERPQEDAY-RVAIEEYRAVSRARIAKLSDADLATIVGVLPQ-RQI 458
+ L PK + Y+ + + Q + Y ++ +++ ++ A K+ D ++ +L Q R+
Sbjct: 408 KSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSA--GKM---DKMRLLNILMQLRKC 462
Query: 459 SNY 461
N+
Sbjct: 463 CNH 465
Score = 283 (104.7 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 67/202 (33%), Positives = 115/202 (56%)
Query: 278 VCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLML 337
VC + +E +++K + K++ W +++DEAH +K++ S + ++ ++ N RL+L
Sbjct: 288 VCVTSYEM-VIKEKS---VFKKFHWRYLVIDEAHRIKNEKS-KLSEIVREFKSTN-RLLL 341
Query: 338 TGTPLQNDLHELWSLLEFMMPDLFATED-----VDLKKLLNGEDRDLIGRMKSILGPFIL 392
TGTPLQN+LHELW+LL F++PD+F + D D K L D+ L+ R+ ++L PF+L
Sbjct: 342 TGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLG--DQKLVERLHAVLKPFLL 399
Query: 393 RRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGV 452
RR+K+DV + L PK + Y+ + + Q + Y + + D D+ G
Sbjct: 400 RRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKIL-------------MKDIDVLNSAGK 446
Query: 453 LPQRQISNYFVQFRKIANHPLL 474
+ + ++ N +Q RK NHP L
Sbjct: 447 MDKMRLLNILMQLRKCCNHPYL 468
>UNIPROTKB|F1RTI9 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0036310 "annealing helicase
activity" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0007420 "brain
development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0007420 GO:GO:0030182 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016589
GO:GO:0008094 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
OMA:PMSQKRK EMBL:CU695129 Ensembl:ENSSSCT00000013830 Uniprot:F1RTI9
Length = 1073
Score = 472 (171.2 bits), Expect = 9.2e-44, P = 9.2e-44
Identities = 110/303 (36%), Positives = 181/303 (59%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQ+ G+N+L+ LY G+ G ILADEMGLGKT+Q I L LKH N PGPH+++ P
Sbjct: 186 LRDYQIRGLNWLISLYENGVNG-ILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPK 244
Query: 228 SVLENWERELKKWCPSFSVLQYHGA--GRTAYSRELSSLAKAGLPPPFNVLLVCYSLFER 285
S L NW E K+W PS V+ + G R A+ R+ +P ++V + Y +
Sbjct: 245 STLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEM------MPGEWDVCVTSYEMV-- 296
Query: 286 HSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
+++K + K++ W +++DEAH +K++ S + ++ ++ N RL+LTGTPLQN+
Sbjct: 297 --IKEKS---VFKKFHWRYLVIDEAHRIKNEKS-KLSEIVREFKSTN-RLLLTGTPLQNN 349
Query: 346 LHELWSLLEFMMPDLFATED-----VDLKKLLNGEDRDLIGRMKSILGPFILRRLKSDVM 400
LHELW+LL F++PD+F + D D K L D+ L+ R+ ++L PF+LRR+K+DV
Sbjct: 350 LHELWALLNFLLPDVFNSADDFDSWFDTKNCLG--DQKLVERLHAVLKPFLLRRIKTDVE 407
Query: 401 QQLVPKIQWVEYVTMERPQEDAY-RVAIEEYRAVSRARIAKLSDADLATIVGVLPQ-RQI 458
+ L PK + Y+ + + Q + Y ++ +++ ++ A K+ D ++ +L Q R+
Sbjct: 408 KSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSA--GKM---DKMRLLNILMQLRKC 462
Query: 459 SNY 461
N+
Sbjct: 463 CNH 465
Score = 283 (104.7 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 67/202 (33%), Positives = 115/202 (56%)
Query: 278 VCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLML 337
VC + +E +++K + K++ W +++DEAH +K++ S + ++ ++ N RL+L
Sbjct: 288 VCVTSYEM-VIKEKS---VFKKFHWRYLVIDEAHRIKNEKS-KLSEIVREFKSTN-RLLL 341
Query: 338 TGTPLQNDLHELWSLLEFMMPDLFATED-----VDLKKLLNGEDRDLIGRMKSILGPFIL 392
TGTPLQN+LHELW+LL F++PD+F + D D K L D+ L+ R+ ++L PF+L
Sbjct: 342 TGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLG--DQKLVERLHAVLKPFLL 399
Query: 393 RRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGV 452
RR+K+DV + L PK + Y+ + + Q + Y + + D D+ G
Sbjct: 400 RRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKIL-------------MKDIDVLNSAGK 446
Query: 453 LPQRQISNYFVQFRKIANHPLL 474
+ + ++ N +Q RK NHP L
Sbjct: 447 MDKMRLLNILMQLRKCCNHPYL 468
>UNIPROTKB|K7GLQ2 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
RefSeq:XP_003135410.1 Ensembl:ENSSSCT00000033549 GeneID:100188905
Uniprot:K7GLQ2
Length = 1073
Score = 472 (171.2 bits), Expect = 9.2e-44, P = 9.2e-44
Identities = 110/303 (36%), Positives = 181/303 (59%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQ+ G+N+L+ LY G+ G ILADEMGLGKT+Q I L LKH N PGPH+++ P
Sbjct: 186 LRDYQIRGLNWLISLYENGVNG-ILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPK 244
Query: 228 SVLENWERELKKWCPSFSVLQYHGA--GRTAYSRELSSLAKAGLPPPFNVLLVCYSLFER 285
S L NW E K+W PS V+ + G R A+ R+ +P ++V + Y +
Sbjct: 245 STLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEM------MPGEWDVCVTSYEMV-- 296
Query: 286 HSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
+++K + K++ W +++DEAH +K++ S + ++ ++ N RL+LTGTPLQN+
Sbjct: 297 --IKEKS---VFKKFHWRYLVIDEAHRIKNEKS-KLSEIVREFKSTN-RLLLTGTPLQNN 349
Query: 346 LHELWSLLEFMMPDLFATED-----VDLKKLLNGEDRDLIGRMKSILGPFILRRLKSDVM 400
LHELW+LL F++PD+F + D D K L D+ L+ R+ ++L PF+LRR+K+DV
Sbjct: 350 LHELWALLNFLLPDVFNSADDFDSWFDTKNCLG--DQKLVERLHAVLKPFLLRRIKTDVE 407
Query: 401 QQLVPKIQWVEYVTMERPQEDAY-RVAIEEYRAVSRARIAKLSDADLATIVGVLPQ-RQI 458
+ L PK + Y+ + + Q + Y ++ +++ ++ A K+ D ++ +L Q R+
Sbjct: 408 KSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSA--GKM---DKMRLLNILMQLRKC 462
Query: 459 SNY 461
N+
Sbjct: 463 CNH 465
Score = 283 (104.7 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 67/202 (33%), Positives = 115/202 (56%)
Query: 278 VCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLML 337
VC + +E +++K + K++ W +++DEAH +K++ S + ++ ++ N RL+L
Sbjct: 288 VCVTSYEM-VIKEKS---VFKKFHWRYLVIDEAHRIKNEKS-KLSEIVREFKSTN-RLLL 341
Query: 338 TGTPLQNDLHELWSLLEFMMPDLFATED-----VDLKKLLNGEDRDLIGRMKSILGPFIL 392
TGTPLQN+LHELW+LL F++PD+F + D D K L D+ L+ R+ ++L PF+L
Sbjct: 342 TGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLG--DQKLVERLHAVLKPFLL 399
Query: 393 RRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGV 452
RR+K+DV + L PK + Y+ + + Q + Y + + D D+ G
Sbjct: 400 RRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKIL-------------MKDIDVLNSAGK 446
Query: 453 LPQRQISNYFVQFRKIANHPLL 474
+ + ++ N +Q RK NHP L
Sbjct: 447 MDKMRLLNILMQLRKCCNHPYL 468
>UNIPROTKB|F1N166 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0036310 "annealing helicase
activity" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0007420 "brain
development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0007420 GO:GO:0030182 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016589
GO:GO:0008094 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
OMA:PMSQKRK EMBL:DAAA02067438 EMBL:DAAA02067437 IPI:IPI01018574
Ensembl:ENSBTAT00000002973 Uniprot:F1N166
Length = 1078
Score = 472 (171.2 bits), Expect = 9.3e-44, P = 9.3e-44
Identities = 111/303 (36%), Positives = 182/303 (60%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQ+ G+N+L+ LY G+ G ILADEMGLGKT+Q I L LKH N PGPH+++ P
Sbjct: 186 LRDYQIRGLNWLISLYENGVNG-ILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPK 244
Query: 228 SVLENWERELKKWCPSFSVLQYHGA--GRTAYSRELSSLAKAGLPPPFNVLLVCYSLFER 285
S L NW E K+W PS V+ + G R A+ R+ +P ++V + Y +
Sbjct: 245 STLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEM------MPGEWDVCVTSYEMV-- 296
Query: 286 HSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
+++K + K++ W +++DEAH +K++ S + ++ ++ N RL+LTGTPLQN+
Sbjct: 297 --IKEKS---VFKKFHWRYLVIDEAHRIKNEKS-KLSEIVRDFKSTN-RLLLTGTPLQNN 349
Query: 346 LHELWSLLEFMMPDLF-ATEDVD----LKKLLNGEDRDLIGRMKSILGPFILRRLKSDVM 400
LHELW+LL F++PD+F + ED D K L D+ L+ R+ ++L PF+LRR+K+DV
Sbjct: 350 LHELWALLNFLLPDVFNSAEDFDSWFDTKNCLG--DQKLVERLHTVLKPFLLRRIKTDVE 407
Query: 401 QQLVPKIQWVEYVTMERPQEDAY-RVAIEEYRAVSRARIAKLSDADLATIVGVLPQ-RQI 458
+ L PK + Y+ + + Q + Y ++ +++ ++ A K+ D ++ +L Q R+
Sbjct: 408 KSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSA--GKM---DKMRLLNILMQLRKC 462
Query: 459 SNY 461
N+
Sbjct: 463 CNH 465
Score = 283 (104.7 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 68/202 (33%), Positives = 116/202 (57%)
Query: 278 VCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLML 337
VC + +E +++K + K++ W +++DEAH +K++ S + ++ ++ N RL+L
Sbjct: 288 VCVTSYEM-VIKEKS---VFKKFHWRYLVIDEAHRIKNEKS-KLSEIVRDFKSTN-RLLL 341
Query: 338 TGTPLQNDLHELWSLLEFMMPDLF-ATEDVD----LKKLLNGEDRDLIGRMKSILGPFIL 392
TGTPLQN+LHELW+LL F++PD+F + ED D K L D+ L+ R+ ++L PF+L
Sbjct: 342 TGTPLQNNLHELWALLNFLLPDVFNSAEDFDSWFDTKNCLG--DQKLVERLHTVLKPFLL 399
Query: 393 RRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGV 452
RR+K+DV + L PK + Y+ + + Q + Y + + D D+ G
Sbjct: 400 RRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKIL-------------MKDIDVLNSAGK 446
Query: 453 LPQRQISNYFVQFRKIANHPLL 474
+ + ++ N +Q RK NHP L
Sbjct: 447 MDKMRLLNILMQLRKCCNHPYL 468
>WB|WBGene00002169 [details] [associations]
symbol:isw-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040027 "negative regulation of
vulval development" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0040026 "positive regulation of vulval development"
evidence=IGI] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00384 SMART:SM00490 SMART:SM00717 GO:GO:0005524
GO:GO:0008340 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0016246 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000790 GO:GO:0040035 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0004386 GO:GO:0040027 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 GO:GO:0040026 EMBL:FO081312 PIR:S44645
RefSeq:NP_498468.2 ProteinModelPortal:P41877 SMR:P41877
STRING:P41877 PaxDb:P41877 EnsemblMetazoa:F37A4.8 GeneID:175944
KEGG:cel:CELE_F37A4.8 UCSC:F37A4.8 CTD:175944 WormBase:F37A4.8
GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862 InParanoid:P41877
KO:K11654 OMA:MQRKWYK NextBio:890418 SUPFAM:SSF101224
Uniprot:P41877
Length = 1009
Score = 471 (170.9 bits), Expect = 1.0e-43, P = 1.0e-43
Identities = 106/288 (36%), Positives = 167/288 (57%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
++ YQ+ G+N+L L I G ILADEMGLGKT+Q I+ + +KH N PHL++ P
Sbjct: 132 MRDYQVRGLNWLASLQHNKING-ILADEMGLGKTLQTISMIGYMKHYKNKASPHLVIVPK 190
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
S L+NW E KKWCPS + + G A ++ L + LP F+V Y + +
Sbjct: 191 STLQNWANEFKKWCPSINAVVLIG-DEAARNQVLRDVI---LPQKFDVCCTTYEMMLKVK 246
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
Q LK+ W +++DEAH +K++ S + + + N+ RL++TGTPLQN+LH
Sbjct: 247 TQ-------LKKLNWRYIIIDEAHRIKNEKSKLSETVREL--NSENRLLITGTPLQNNLH 297
Query: 348 ELWSLLEFMMPDLFATEDVDLKKLLNGE----DRDLIGRMKSILGPFILRRLKSDVMQQL 403
ELW+LL F++PD+F + D D + + + DL+ R+ +L PF+LRR+KSDV + L
Sbjct: 298 ELWALLNFLLPDIFTSSD-DFDSWFSNDAMSGNTDLVQRLHKVLQPFLLRRIKSDVEKSL 356
Query: 404 VPKIQWVEYVTMERPQEDAY-RVAIEEYRAVSRARIAKLSDADLATIV 450
+PK + YV + + Q + Y +V +++ ++ A K+ A L I+
Sbjct: 357 LPKKEVKVYVGLSKMQREWYTKVLMKDIDIINGA--GKVEKARLMNIL 402
Score = 285 (105.4 bits), Expect = 8.2e-22, P = 8.2e-22
Identities = 62/182 (34%), Positives = 103/182 (56%)
Query: 297 LKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSLLEFM 356
LK+ W +++DEAH +K++ S + + + N+ RL++TGTPLQN+LHELW+LL F+
Sbjct: 249 LKKLNWRYIIIDEAHRIKNEKSKLSETVREL--NSENRLLITGTPLQNNLHELWALLNFL 306
Query: 357 MPDLFATEDVDLKKLLNGE----DRDLIGRMKSILGPFILRRLKSDVMQQLVPKIQWVEY 412
+PD+F + D D + + + DL+ R+ +L PF+LRR+KSDV + L+PK + Y
Sbjct: 307 LPDIFTSSD-DFDSWFSNDAMSGNTDLVQRLHKVLQPFLLRRIKSDVEKSLLPKKEVKVY 365
Query: 413 VTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQISNYFVQFRKIANHP 472
V + + Q + Y + + D D+ G + + ++ N + RK NHP
Sbjct: 366 VGLSKMQREWYTKVL-------------MKDIDIINGAGKVEKARLMNILMHLRKCVNHP 412
Query: 473 LL 474
L
Sbjct: 413 YL 414
>SGD|S000000449 [details] [associations]
symbol:ISW1 "ATPase subunit of imitation-switch (ISWI) class
chromatin remodelers" species:4932 "Saccharomyces cerevisiae"
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IGI]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0031491 "nucleosome binding" evidence=IEA;IDA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0030874 "nucleolar chromatin" evidence=IDA] [GO:0000182 "rDNA
binding" evidence=IDA] [GO:0006363 "termination of RNA polymerase I
transcription" evidence=IGI] [GO:0070870 "heterochromatin
maintenance involved in chromatin silencing" evidence=IGI;IMP]
[GO:0016587 "Isw1 complex" evidence=IPI] [GO:0006354 "DNA-dependent
transcription, elongation" evidence=IMP;IDA] [GO:0006338 "chromatin
remodeling" evidence=IEA;IGI;IMP;IPI] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0001178 "regulation of transcriptional start site
selection at RNA polymerase II promoter" evidence=IGI] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016584 "nucleosome positioning"
evidence=IGI;IMP] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 SGD:S000000449 GO:GO:0005524 GO:GO:0006200
GO:GO:0045944 EMBL:BK006936 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0006338 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
GO:GO:0034401 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0006363 GO:GO:0006354 GO:GO:0006369
GeneTree:ENSGT00670000098110 GO:GO:0030874 GO:GO:0000182
GO:GO:0001178 GO:GO:0070870 GO:GO:0016587 PDB:2Y9Y PDB:2Y9Z
PDBsum:2Y9Y PDBsum:2Y9Z HOGENOM:HOG000192862 SUPFAM:SSF101224
EMBL:Z36114 PIR:S46122 RefSeq:NP_009804.1 ProteinModelPortal:P38144
SMR:P38144 DIP:DIP-6601N IntAct:P38144 MINT:MINT-614918
STRING:P38144 PaxDb:P38144 PeptideAtlas:P38144 EnsemblFungi:YBR245C
GeneID:852547 KEGG:sce:YBR245C CYGD:YBR245c OMA:LEMITHG
OrthoDB:EOG48SM27 EvolutionaryTrace:P38144 NextBio:971628
Genevestigator:P38144 GermOnline:YBR245C Uniprot:P38144
Length = 1129
Score = 471 (170.9 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 122/330 (36%), Positives = 188/330 (56%)
Query: 136 RYAEVEASSVRIVTQSDIDDACGDEDSDFQ----PV-----LKPYQLVGVNFLLLLYRKG 186
R E E + ++ + D DD DE +FQ P L+PYQ+ GVN+L+ L++
Sbjct: 159 RKTEHEEDA-ELLKEEDSDD---DESIEFQFRESPAYVNGQLRPYQIQGVNWLVSLHKNK 214
Query: 187 IAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPASVLENWERELKKWCPSFSV 246
IAG ILADEMGLGKT+Q I++L L+++ PGP L++ P S L NW RE+ +W P +
Sbjct: 215 IAG-ILADEMGLGKTLQTISFLGYLRYIEKIPGPFLVIAPKSTLNNWLREINRWTPDVNA 273
Query: 247 LQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHSVQQKDDRKILKRWRWSCVL 306
G EL + K L F+V++ Y + R ++ LK+ W ++
Sbjct: 274 FILQGDKEER--AEL--IQKKLLGCDFDVVIASYEIIIR-------EKSPLKKINWEYII 322
Query: 307 MDEAHALKDKNSYRWKNLMS-VARNANQRLMLTGTPLQNDLHELWSLLEFMMPDLFA-TE 364
+DEAH +K++ S + L +RN RL++TGTPLQN+LHELW+LL F++PD+F+ +
Sbjct: 323 IDEAHRIKNEESMLSQVLREFTSRN---RLLITGTPLQNNLHELWALLNFLLPDIFSDAQ 379
Query: 365 DVD--LKKLLNGEDRD-LIGRMKSILGPFILRRLKSDVMQQLVPKIQWVEYVTMERPQED 421
D D ED+D ++ ++ ++L PF+LRR+KSDV L+PK + YV M Q+
Sbjct: 380 DFDDWFSSESTEEDQDKIVKQLHTVLQPFLLRRIKSDVETSLLPKKELNLYVGMSSMQKK 439
Query: 422 AYRVAIE-EYRAVSRARIAKLSDADLATIV 450
Y+ +E + AV+ + +K S L I+
Sbjct: 440 WYKKILEKDLDAVNGSNGSKESKTRLLNIM 469
Score = 274 (101.5 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 72/208 (34%), Positives = 118/208 (56%)
Query: 273 FNVLLVCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMS-VARNA 331
F+V++ Y + R ++ LK+ W +++DEAH +K++ S + L +RN
Sbjct: 296 FDVVIASYEIIIR-------EKSPLKKINWEYIIIDEAHRIKNEESMLSQVLREFTSRN- 347
Query: 332 NQRLMLTGTPLQNDLHELWSLLEFMMPDLFA-TEDVD--LKKLLNGEDRD-LIGRMKSIL 387
RL++TGTPLQN+LHELW+LL F++PD+F+ +D D ED+D ++ ++ ++L
Sbjct: 348 --RLLITGTPLQNNLHELWALLNFLLPDIFSDAQDFDDWFSSESTEEDQDKIVKQLHTVL 405
Query: 388 GPFILRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIE-EYRAVSRARIAKLSDADL 446
PF+LRR+KSDV L+PK + YV M Q+ Y+ +E + AV+ + +K S
Sbjct: 406 QPFLLRRIKSDVETSLLPKKELNLYVGMSSMQKKWYKKILEKDLDAVNGSNGSKES---- 461
Query: 447 ATIVGVLPQRQISNYFVQFRKIANHPLL 474
+ ++ N +Q RK NHP L
Sbjct: 462 --------KTRLLNIMMQLRKCCNHPYL 481
>DICTYBASE|DDB_G0292948 [details] [associations]
symbol:isw "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0016587 "Isw1
complex" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 dictyBase:DDB_G0292948 GO:GO:0005524
GenomeReviews:CM000155_GR GO:GO:0003677 EMBL:AAFI02000197
GO:GO:0016887 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016587 KO:K11654 SUPFAM:SSF101224
RefSeq:XP_629432.1 ProteinModelPortal:Q54CI4 STRING:Q54CI4
PRIDE:Q54CI4 EnsemblProtists:DDB0231763 GeneID:8628951
KEGG:ddi:DDB_G0292948 InParanoid:Q54CI4 OMA:IREANAF
ProtClustDB:CLSZ2728711 Uniprot:Q54CI4
Length = 1221
Score = 463 (168.0 bits), Expect = 1.4e-43, Sum P(2) = 1.4e-43
Identities = 101/262 (38%), Positives = 160/262 (61%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
++ YQ+ G+N+L+ LY +GI G ILADEMGLGKT+Q I+ L L GPHLI+ P
Sbjct: 276 MRDYQVYGLNWLIQLYERGING-ILADEMGLGKTLQTISLLGYLSEYKGIRGPHLIIAPK 334
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
S L W +E +WCP V+++HG+ E + K L F VC + +E +
Sbjct: 335 STLSGWAKEFTRWCPFLRVVRFHGS-----KEEREDIKKNQLI--FKKFDVCITTYEV-A 386
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
+++K K++ W +++DEAH +K++NS K + N+ RL++TGTPLQN+LH
Sbjct: 387 IREKST---FKKFSWRYIIIDEAHRIKNENSVLSKGVRMF--NSQFRLLITGTPLQNNLH 441
Query: 348 ELWSLLEFMMPDLFATEDVDLKK---LLNGED--RDLIGRMKSILGPFILRRLKSDVMQQ 402
ELWSLL F++PD+F++ D D K L N + +++I ++ +L PF+LRR+K++V +
Sbjct: 442 ELWSLLNFLLPDVFSSSD-DFDKWFDLANNTENQQEVIDKLHKVLRPFLLRRIKTEVEKS 500
Query: 403 LVPKIQWVEYVTMERPQEDAYR 424
L PK + +V + Q++ Y+
Sbjct: 501 LPPKKEIKLFVGLSTMQKEWYK 522
Score = 276 (102.2 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 75/239 (31%), Positives = 133/239 (55%)
Query: 278 VCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLML 337
VC + +E ++++K K++ W +++DEAH +K++NS K + N+ RL++
Sbjct: 378 VCITTYEV-AIREKST---FKKFSWRYIIIDEAHRIKNENSVLSKGVRMF--NSQFRLLI 431
Query: 338 TGTPLQNDLHELWSLLEFMMPDLFATEDVDLKK---LLNGED--RDLIGRMKSILGPFIL 392
TGTPLQN+LHELWSLL F++PD+F++ D D K L N + +++I ++ +L PF+L
Sbjct: 432 TGTPLQNNLHELWSLLNFLLPDVFSSSD-DFDKWFDLANNTENQQEVIDKLHKVLRPFLL 490
Query: 393 RRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGV 452
RR+K++V + L PK + +V + Q++ Y+ R +S K DA + G
Sbjct: 491 RRIKTEVEKSLPPKKEIKLFVGLSTMQKEWYK------RLLS-----KDLDAVVVGAKGN 539
Query: 453 LPQRQISNYFVQFRKIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFECTLERVIEELK 511
+ ++ N +Q RK NHP L + + + H + G L++++++LK
Sbjct: 540 TGRVRLLNICMQLRKACNHPYL----FDGAEEEPYTTGEHLIDNSGKMALLDKLLKKLK 594
Score = 37 (18.1 bits), Expect = 1.4e-43, Sum P(2) = 1.4e-43
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 6 AEISEISDEEWEPHSESF 23
A ++E +EE EPHS +F
Sbjct: 247 AIMNETMEEE-EPHSFNF 263
>UNIPROTKB|Q6ZRS2 [details] [associations]
symbol:SRCAP "Helicase SRCAP" species:9606 "Homo sapiens"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0043234
"protein complex" evidence=IDA] [GO:0003713 "transcription
coactivator activity" evidence=TAS] [GO:0004402 "histone
acetyltransferase activity" evidence=TAS] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0016573 "histone acetylation" evidence=TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005794
GO:GO:0019048 GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478
PRINTS:PR00929 GO:GO:0006357 GO:GO:0006351 GO:GO:0003713
GO:GO:0004386 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AC106886 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 GO:GO:0004402
EMBL:AC093249 EMBL:AK128030 EMBL:AB002307 EMBL:BC159099
EMBL:AF143946 IPI:IPI00009101 IPI:IPI00444046 IPI:IPI00550342
RefSeq:NP_006653.2 UniGene:Hs.647334 ProteinModelPortal:Q6ZRS2
SMR:Q6ZRS2 IntAct:Q6ZRS2 MINT:MINT-123408 STRING:Q6ZRS2
PhosphoSite:Q6ZRS2 DMDM:296452947 PaxDb:Q6ZRS2 PRIDE:Q6ZRS2
DNASU:10847 Ensembl:ENST00000262518 Ensembl:ENST00000344771
Ensembl:ENST00000380361 Ensembl:ENST00000395059 GeneID:10847
KEGG:hsa:10847 UCSC:uc002dze.1 UCSC:uc002dzg.1 CTD:10847
GeneCards:GC16P030710 H-InvDB:HIX0012970 HGNC:HGNC:16974
HPA:HPA028929 MIM:136140 MIM:611421 neXtProt:NX_Q6ZRS2
Orphanet:2044 PharmGKB:PA162404706 HOGENOM:HOG000168717
InParanoid:Q6ZRS2 KO:K11661 OMA:LGTGNPQ OrthoDB:EOG4B2SWB
ChiTaRS:SRCAP GenomeRNAi:10847 NextBio:41182 ArrayExpress:Q6ZRS2
Bgee:Q6ZRS2 CleanEx:HS_SRCAP Genevestigator:Q6ZRS2 Uniprot:Q6ZRS2
Length = 3230
Score = 471 (170.9 bits), Expect = 1.4e-43, Sum P(2) = 1.4e-43
Identities = 121/341 (35%), Positives = 193/341 (56%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQ +G+++L+ +Y K + G ILADEMGLGKTIQ I+ L L + GPHLI+ P
Sbjct: 618 LREYQHIGLDWLVTMYEKKLNG-ILADEMGLGKTIQTISLLAHLACEKGNWGPHLIIVPT 676
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
SV+ NWE ELK+WCPSF +L Y+GA + R+L + G P N VC + ++
Sbjct: 677 SVMLNWEMELKRWCPSFKILTYYGAQK---ERKLK---RQGWTKP-NAFHVCITSYKL-- 727
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
V Q D + +R W +++DEA +K+ S RW++L++ N+ +RL+LTGTPLQN L
Sbjct: 728 VLQ--DHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNF--NSQRRLLLTGTPLQNSLM 783
Query: 348 ELWSLLEFMMPDLFATE-------DVDLKKLLNGE---DRDLIGRMKSILGPFILRRLKS 397
ELWSL+ F+MP +F + L ++ G + L+ R+ +L PF+LRR+K
Sbjct: 784 ELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRPFLLRRVKV 843
Query: 398 DVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQ-R 456
DV +Q+ K + V + + Q Y +++ A + + L+ +++ +L Q R
Sbjct: 844 DVEKQMPKKYEHVIRCRLSKRQRCLY----DDFMAQTTTK-ETLATGHFMSVINILMQLR 898
Query: 457 QISNYFVQF--RKIANHPLLVRRI-YSDDDVVRFAKKLHPM 494
++ N+ F R + + P + I +S +V A +HP+
Sbjct: 899 KVCNHPNLFDPRPVTS-PFITPGICFSTASLVLRATDVHPL 938
Score = 41 (19.5 bits), Expect = 1.4e-43, Sum P(2) = 1.4e-43
Identities = 7/8 (87%), Positives = 7/8 (87%)
Query: 159 DEDSDFQP 166
DED DFQP
Sbjct: 284 DEDGDFQP 291
>UNIPROTKB|E1C0M8 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0031491 "nucleosome binding" evidence=IEA] [GO:0000183
"chromatin silencing at rDNA" evidence=IEA] [GO:0000793 "condensed
chromosome" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005677 "chromatin
silencing complex" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0009790 "embryo development" evidence=IEA] [GO:0016584
"nucleosome positioning" evidence=IEA] [GO:0016589 "NURF complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0031213 "RSF complex" evidence=IEA] [GO:0042393 "histone
binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0043596 "nuclear replication fork"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005730
GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0043596 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0000183 GO:GO:0006302 GO:GO:0004386 GO:GO:0000793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016584 GO:GO:0006334 GO:GO:0005677
GO:GO:0016589 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
OMA:EDYCHWR GO:GO:0031213 EMBL:AADN02016239 EMBL:AADN02016240
IPI:IPI00577188 Ensembl:ENSGALT00000016121 ArrayExpress:E1C0M8
Uniprot:E1C0M8
Length = 1038
Score = 468 (169.8 bits), Expect = 2.3e-43, P = 2.3e-43
Identities = 112/301 (37%), Positives = 180/301 (59%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQ+ G+N+L+ LY GI G ILADEMGLGKT+Q I+ L +KH N PGPH+++ P
Sbjct: 165 LRDYQVRGLNWLISLYENGING-ILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPK 223
Query: 228 SVLENWERELKKWCPSFSVLQYHGAG--RTAYSRELSSLAKAGLPPPFNVLLVCYSLFER 285
S L NW E K+W P+ + G R A+ R++ LP ++V + Y +
Sbjct: 224 STLHNWMNEFKRWVPTLRAVCLIGDKDQRAAFVRDVL------LPGEWDVCVTSYEML-- 275
Query: 286 HSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
+++K + K++ W +++DEAH +K++ S + ++ + N RL+LTGTPLQN+
Sbjct: 276 --IKEKS---VFKKFNWRYLVIDEAHRIKNEKS-KLSEIVREFKTTN-RLLLTGTPLQNN 328
Query: 346 LHELWSLLEFMMPDLF-ATEDVDLKKLLNG--EDRDLIGRMKSILGPFILRRLKSDVMQQ 402
LHELW+LL F++PD+F ++ED D N D+ L+ R+ +L PF+LRR+K+DV +
Sbjct: 329 LHELWALLNFLLPDVFNSSEDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKADVEKS 388
Query: 403 LVPKIQWVEYVTMERPQEDAY-RVAIEEYRAVSRARIAKLSDADLATIVGVLPQ-RQISN 460
L PK + YV + + Q + Y R+ +++ ++ A KL D ++ +L Q R+ N
Sbjct: 389 LPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSA--GKL---DKMRLLNILMQLRKCCN 443
Query: 461 Y 461
+
Sbjct: 444 H 444
Score = 290 (107.1 bits), Expect = 2.3e-22, P = 2.3e-22
Identities = 71/200 (35%), Positives = 115/200 (57%)
Query: 278 VCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLML 337
VC + +E +++K + K++ W +++DEAH +K++ S + ++ + N RL+L
Sbjct: 267 VCVTSYEM-LIKEKS---VFKKFNWRYLVIDEAHRIKNEKS-KLSEIVREFKTTN-RLLL 320
Query: 338 TGTPLQNDLHELWSLLEFMMPDLF-ATEDVDLKKLLNG--EDRDLIGRMKSILGPFILRR 394
TGTPLQN+LHELW+LL F++PD+F ++ED D N D+ L+ R+ +L PF+LRR
Sbjct: 321 TGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRR 380
Query: 395 LKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLP 454
+K+DV + L PK + YV + + Q + Y RI + D D+ G L
Sbjct: 381 IKADVEKSLPPKKEVKIYVGLSKMQREWY------------TRIL-MKDIDILNSAGKLD 427
Query: 455 QRQISNYFVQFRKIANHPLL 474
+ ++ N +Q RK NHP L
Sbjct: 428 KMRLLNILMQLRKCCNHPYL 447
>WB|WBGene00010845 [details] [associations]
symbol:M03C11.8 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0003677 GO:GO:0006281 GO:GO:0016568 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K14439
GeneTree:ENSGT00630000089890 EMBL:Z49128 EMBL:AL021171 PIR:T23046
RefSeq:NP_499301.2 ProteinModelPortal:G5EDG2 SMR:G5EDG2
EnsemblMetazoa:M03C11.8 GeneID:176462 KEGG:cel:CELE_M03C11.8
WormBase:M03C11.8 OMA:KEERYMA NextBio:892680 Uniprot:G5EDG2
Length = 989
Score = 457 (165.9 bits), Expect = 2.4e-43, Sum P(2) = 2.4e-43
Identities = 132/368 (35%), Positives = 198/368 (53%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L YQL+GV +L+++Y K + AIL DEMGLGKTIQ + +L LK + GPHLIV P+
Sbjct: 394 LHDYQLIGVKWLIMMYNKDL-NAILGDEMGLGKTIQIVAFLSYLKQIGKT-GPHLIVVPS 451
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
S +ENW E KWCPS +L Y+G+ + L K +V+L Y++ S
Sbjct: 452 STIENWIGEFHKWCPSIQLLTYYGSQDER--KHLRHRVKKQ-KDHIDVILTTYNMVTSKS 508
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
DD+K K + + V+ DE H LK+ +S R++ LM V ++++LTGTPLQN+L
Sbjct: 509 ----DDKKFFKNFSLNYVIYDEGHMLKNCDSERYRGLMKV--KGKKKILLTGTPLQNNLI 562
Query: 348 ELWSLLEFMMPDLFAT--EDVD-----LKKL---LNGEDR-----DLIGRMKSILGPFIL 392
EL SL+ F++ +F ED+ K+L L+ +++ D I K+IL P+IL
Sbjct: 563 ELISLMYFVLSKVFNKYCEDITHLLQHFKQLGPALDTKNKALYQQDRIEEAKAILQPYIL 622
Query: 393 RRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGV 452
RRLK+ V+ L K + + V M++PQ+ Y +E A+ ++ + D+ G
Sbjct: 623 RRLKNQVLGSLPSKSEQIIEVEMKKPQKQLYDNIVE---ALQQSE--ESGDS-----YGS 672
Query: 453 LPQRQISNYFVQFRKIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFECTLERVIEELKN 512
L ++ R+ ANHPLL R Y+D + + AK L + + V E+L
Sbjct: 673 L---------MRLRQAANHPLLRRSEYTDQKLDKIAKMLCLREKAYADKKWQHVSEDLAW 723
Query: 513 YSDFSIHQ 520
SD IHQ
Sbjct: 724 LSDIKIHQ 731
Score = 37 (18.1 bits), Expect = 2.4e-43, Sum P(2) = 2.4e-43
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 1 MKREYAEISEISDEEW 16
MKR +S+ SD+EW
Sbjct: 138 MKR-IRTLSDSSDDEW 152
>WB|WBGene00007027 [details] [associations]
symbol:ssl-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0003677 GO:GO:0040011 GO:GO:0016568 GO:GO:0040035
GO:GO:0004386 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427 KO:K11320
EMBL:AL132904 EMBL:AY551965 RefSeq:NP_001255179.1
RefSeq:NP_001255180.1 RefSeq:NP_001255181.1 RefSeq:NP_001255182.1
UniGene:Cel.203 ProteinModelPortal:Q9NEL2 SMR:Q9NEL2
MINT:MINT-3384018 PaxDb:Q9NEL2 EnsemblMetazoa:Y111B2A.22a
GeneID:190954 KEGG:cel:CELE_Y111B2A.22 UCSC:Y111B2A.22 CTD:190954
WormBase:Y111B2A.22a WormBase:Y111B2A.22b WormBase:Y111B2A.22c
WormBase:Y111B2A.22d InParanoid:Q9NEL2 OMA:HLACSES NextBio:947488
ArrayExpress:Q9NEL2 Uniprot:Q9NEL2
Length = 2395
Score = 473 (171.6 bits), Expect = 2.9e-43, P = 2.9e-43
Identities = 120/327 (36%), Positives = 188/327 (57%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQ+VG+++++ LY K + G ILADEMGLGKTIQ I+ L + + GPHLIV P
Sbjct: 558 LREYQMVGLDWMVTLYEKNLNG-ILADEMGLGKTIQTISLLAHMACSESIWGPHLIVVPT 616
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
SV+ NWE E KKWCP+ +L Y G TA +E + K + P N VC + ++ +
Sbjct: 617 SVILNWEMEFKKWCPALKILTYFG---TA--KERAEKRKGWMKP--NCFHVCITSYK--T 667
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
V Q D + K+ W +++DEA +K+ S RW+ L++V A +RL+LTGTPLQN L
Sbjct: 668 VTQ--DIRAFKQRAWQYLILDEAQNIKNWKSQRWQALLNV--RARRRLLLTGTPLQNSLM 723
Query: 348 ELWSLLEFMMPDLFATEDVDLKK--------LLNGE---DRDLIGRMKSILGPFILRRLK 396
ELWSL+ F+MP +F++ D D K ++ G + LIGR+ +L PFILRRLK
Sbjct: 724 ELWSLMHFLMPTIFSSHD-DFKDWFSNPLTGMMEGNMEFNAPLIGRLHKVLRPFILRRLK 782
Query: 397 SDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQ- 455
+V +QL K + + ++ + Q Y +++ + R+ L ++ +++ ++ Q
Sbjct: 783 KEVEKQLPEKTEHIVNCSLSKRQRYLY----DDFMS-RRSTKENLKSGNMMSVLNIVMQL 837
Query: 456 RQISNYFVQFR-KIANHPLLVRRIYSD 481
R+ N+ F + P +V ++ D
Sbjct: 838 RKCCNHPNLFEPRPVVAPFVVEKLQLD 864
>MGI|MGI:1935129 [details] [associations]
symbol:Smarca5 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 5"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IDA] [GO:0000793 "condensed chromosome" evidence=ISO]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005677 "chromatin silencing complex" evidence=IDA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006302 "double-strand
break repair" evidence=IMP] [GO:0006333 "chromatin assembly or
disassembly" evidence=IDA] [GO:0006334 "nucleosome assembly"
evidence=ISO] [GO:0006338 "chromatin remodeling"
evidence=ISO;IGI;IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0009790 "embryo development"
evidence=IMP] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=ISO] [GO:0016589
"NURF complex" evidence=ISO] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0031213 "RSF complex" evidence=ISO] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP;TAS] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00717
MGI:MGI:1935129 GO:GO:0005524 GO:GO:0045893 GO:GO:0005730
GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0009790 GO:GO:0043596
GO:GO:0006333 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183
GO:GO:0006302 GO:GO:0004386 GO:GO:0000793 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016584 GO:GO:0006334 GO:GO:0005677
GO:GO:0016589 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
KO:K11654 SUPFAM:SSF101224 OMA:EDYCHWR GO:GO:0031213
HOVERGEN:HBG056329 OrthoDB:EOG44J2H9 CTD:8467 EMBL:AF375046
EMBL:AF325921 EMBL:BC021922 EMBL:BC053069 EMBL:AK039811
EMBL:AK052320 IPI:IPI00396739 RefSeq:NP_444354.2 UniGene:Mm.246803
ProteinModelPortal:Q91ZW3 SMR:Q91ZW3 DIP:DIP-36073N IntAct:Q91ZW3
MINT:MINT-1867515 STRING:Q91ZW3 PhosphoSite:Q91ZW3 PaxDb:Q91ZW3
PRIDE:Q91ZW3 Ensembl:ENSMUST00000043359 GeneID:93762 KEGG:mmu:93762
UCSC:uc009mja.1 InParanoid:Q91ZW3 NextBio:351651 Bgee:Q91ZW3
Genevestigator:Q91ZW3 GermOnline:ENSMUSG00000031715 Uniprot:Q91ZW3
Length = 1051
Score = 466 (169.1 bits), Expect = 3.9e-43, P = 3.9e-43
Identities = 112/301 (37%), Positives = 179/301 (59%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQ+ G+N+L+ LY GI G ILADEMGLGKT+Q I+ L +KH N PGPH+++ P
Sbjct: 179 LRDYQVRGLNWLISLYENGING-ILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPK 237
Query: 228 SVLENWERELKKWCPSFSVLQYHG--AGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFER 285
S L NW E KKW P+ + G R A+ R++ LP ++V + Y +
Sbjct: 238 STLHNWMSEFKKWVPTLRSVCLIGDKEQRAAFVRDVL------LPGEWDVCVTSYEML-- 289
Query: 286 HSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
+++K + K++ W +++DEAH +K++ S + ++ + N RL+LTGTPLQN+
Sbjct: 290 --IKEKS---VFKKFNWRYLVIDEAHRIKNEKS-KLSEIVREFKTTN-RLLLTGTPLQNN 342
Query: 346 LHELWSLLEFMMPDLF-ATEDVDLKKLLNG--EDRDLIGRMKSILGPFILRRLKSDVMQQ 402
LHELWSLL F++PD+F + +D D N D+ L+ R+ +L PF+LRR+K+DV +
Sbjct: 343 LHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKADVEKS 402
Query: 403 LVPKIQWVEYVTMERPQEDAY-RVAIEEYRAVSRARIAKLSDADLATIVGVLPQ-RQISN 460
L PK + YV + + Q + Y R+ +++ ++ A K+ D ++ +L Q R+ N
Sbjct: 403 LPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSA--GKM---DKMRLLNILMQLRKCCN 457
Query: 461 Y 461
+
Sbjct: 458 H 458
Score = 287 (106.1 bits), Expect = 5.2e-22, P = 5.2e-22
Identities = 70/200 (35%), Positives = 114/200 (57%)
Query: 278 VCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLML 337
VC + +E +++K + K++ W +++DEAH +K++ S + ++ + N RL+L
Sbjct: 281 VCVTSYEM-LIKEKS---VFKKFNWRYLVIDEAHRIKNEKS-KLSEIVREFKTTN-RLLL 334
Query: 338 TGTPLQNDLHELWSLLEFMMPDLF-ATEDVDLKKLLNG--EDRDLIGRMKSILGPFILRR 394
TGTPLQN+LHELWSLL F++PD+F + +D D N D+ L+ R+ +L PF+LRR
Sbjct: 335 TGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRR 394
Query: 395 LKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLP 454
+K+DV + L PK + YV + + Q + Y RI + D D+ G +
Sbjct: 395 IKADVEKSLPPKKEVKIYVGLSKMQREWY------------TRIL-MKDIDILNSAGKMD 441
Query: 455 QRQISNYFVQFRKIANHPLL 474
+ ++ N +Q RK NHP L
Sbjct: 442 KMRLLNILMQLRKCCNHPYL 461
>RGD|1565642 [details] [associations]
symbol:Srcap "Snf2-related CREBBP activator protein"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005794 "Golgi apparatus" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00384 SMART:SM00490 RGD:1565642
GO:GO:0005524 GO:GO:0005634 GO:GO:0005794 GO:GO:0043234
GO:GO:0003677 InterPro:IPR020478 PRINTS:PR00929 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 OrthoDB:EOG4B2SWB
IPI:IPI00778475 Ensembl:ENSRNOT00000054997 UCSC:RGD:1565642
ArrayExpress:D3ZWX7 Uniprot:D3ZWX7
Length = 3182
Score = 473 (171.6 bits), Expect = 4.2e-43, P = 4.2e-43
Identities = 121/341 (35%), Positives = 194/341 (56%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQ +G+++L+ +Y K + G ILADEMGLGKTIQ I+ L L + GPHLI+ P
Sbjct: 628 LREYQHIGLDWLVTMYEKKLNG-ILADEMGLGKTIQTISLLAHLACEKGNWGPHLIIVPT 686
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
SV+ NWE ELK+WCPSF +L Y+GA + R+L + G P N VC + ++
Sbjct: 687 SVMLNWEMELKRWCPSFKILTYYGAQK---ERKLK---RQGWTKP-NAFHVCITSYKL-- 737
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
V Q D + +R W +++DEA +K+ S RW++L++ N+ +RL+LTGTPLQN L
Sbjct: 738 VLQ--DHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNF--NSQRRLLLTGTPLQNSLM 793
Query: 348 ELWSLLEFMMPDLFATE-------DVDLKKLLNGE---DRDLIGRMKSILGPFILRRLKS 397
ELWSL+ F+MP +F + L ++ G + L+ R+ +L PF+LRR+K
Sbjct: 794 ELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRPFLLRRVKV 853
Query: 398 DVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQ-R 456
DV +Q+ K + V + + Q Y +++ A + + L+ +++ +L Q R
Sbjct: 854 DVEKQMPKKYEHVIRCRLSKRQRCLY----DDFMAQTTTK-ETLATGHFMSVINILMQLR 908
Query: 457 QISNYFVQF--RKIANHPLLVRRI-YSDDDVVRFAKKLHPM 494
++ N+ F R + + P + I +S +V A ++HP+
Sbjct: 909 KVCNHPNLFDPRPVTS-PFITPGICFSTASLVLRATEVHPL 948
>UNIPROTKB|H0YMN5 [details] [associations]
symbol:INO80 "DNA helicase INO80" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] InterPro:IPR000330
InterPro:IPR020838 Pfam:PF00176 Pfam:PF13892 PROSITE:PS51413
GO:GO:0005524 GO:GO:0003677 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AC020661 GO:GO:0016817 ChiTaRS:INO80
HGNC:HGNC:26956 EMBL:AC021753 ProteinModelPortal:H0YMN5 SMR:H0YMN5
Ensembl:ENST00000558357 Bgee:H0YMN5 Uniprot:H0YMN5
Length = 1104
Score = 466 (169.1 bits), Expect = 4.3e-43, P = 4.3e-43
Identities = 122/326 (37%), Positives = 171/326 (52%)
Query: 164 FQPVLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLI 223
F LK YQL G+N+L LY +GI G ILADEMGLGKT+Q+I L L N GP LI
Sbjct: 514 FNGKLKGYQLKGMNWLANLYEQGING-ILADEMGLGKTVQSIALLAHLAERENIWGPFLI 572
Query: 224 VCPASVLENWERELKKWCPSFSVLQYHGA--GRTAYSRELSSLAKAGLPPPFNVLLVCYS 281
+ PAS L NW +E ++ P F VL Y G R R S PF+V++ Y
Sbjct: 573 ISPASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITSYQ 632
Query: 282 LFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTP 341
L VQ D K +R +W +++DEA ALK +S RWK L+ RL+LTGTP
Sbjct: 633 LV----VQ---DVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQF--QCRNRLLLTGTP 683
Query: 342 LQNDLHELWSLLEFMMPDLFATEDV-------DLKKLLNGE---DRDLIGRMKSILGPFI 391
+QN + ELW+LL F+MP LF + + D++ + D + + R+ IL PF+
Sbjct: 684 IQNTMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFM 743
Query: 392 LRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVG 451
LRR+K DV +L KI+ + Y + Q+ Y+ A++ ++ + + A
Sbjct: 744 LRRIKKDVENELSDKIEILMYCQLTSRQKLLYQ-ALKNKISIEDLLQSSMGSTQQAQNT- 801
Query: 452 VLPQRQISNYFVQFRKIANHPLLVRR 477
+ N +QFRK+ NHP L R
Sbjct: 802 ---TSSLMNLVMQFRKVCNHPELFER 824
>POMBASE|SPAC20G8.08c [details] [associations]
symbol:fft1 "fun thirty related protein Fft1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000790
"nuclear chromatin" evidence=NAS] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 PomBase:SPAC20G8.08c
GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003677
GO:GO:0006338 GO:GO:0000790 GO:GO:0004003 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0016585 PIR:T38130 RefSeq:NP_593325.1
ProteinModelPortal:P87114 EnsemblFungi:SPAC20G8.08c.1
GeneID:2541983 KEGG:spo:SPAC20G8.08c OrthoDB:EOG4BCHW4
NextBio:20803065 Uniprot:P87114
Length = 944
Score = 464 (168.4 bits), Expect = 4.7e-43, P = 4.7e-43
Identities = 116/284 (40%), Positives = 162/284 (57%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
LK YQ+VG+N+L L+Y+ ++G ILADEMGLGKT Q I++L LK HL+V P+
Sbjct: 414 LKSYQIVGLNWLCLMYKAKLSG-ILADEMGLGKTCQVISFLASLKE-KGIQNRHLVVVPS 471
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
S L NW RE +K+CPS V Y G ++ + F+VL+ Y L +
Sbjct: 472 STLGNWLREFEKFCPSLRVESYSGTQSERINKRYYLM-----DTDFDVLVTTYQL----A 522
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
+DDR L++ R+ + DE H LK++ S R+K+LM++ AN RL++TGTPLQN+L
Sbjct: 523 SGSRDDRSFLRKQRFDISIFDEGHYLKNRMSERYKHLMNIP--ANFRLLITGTPLQNNLK 580
Query: 348 ELWSLLEFMMPDLF--------------ATEDVDLKKLLNGEDRDLIGRMKSILGPFILR 393
EL SLL FM+P +F T D D+++ ++R I R K+I+ PFILR
Sbjct: 581 ELISLLAFMLPKVFDNNMQGLDIIYKIKTTSDGDIERAYLSQER--ISRAKTIMNPFILR 638
Query: 394 RLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRAR 437
R K +V+ L PKIQ VEY ME Q Y +E V+ R
Sbjct: 639 RRKENVLSDLPPKIQHVEYCHMEETQLSLYLSVLELKNLVNANR 682
Score = 238 (88.8 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 76/252 (30%), Positives = 134/252 (53%)
Query: 273 FNVLLVCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNAN 332
F+VL+ Y L + +DDR L++ R+ + DE H LK++ S R+K+LM++ AN
Sbjct: 512 FDVLVTTYQL----ASGSRDDRSFLRKQRFDISIFDEGHYLKNRMSERYKHLMNIP--AN 565
Query: 333 QRLMLTGTPLQNDLHELWSLLEFMMPDLFAT--EDVDL-KKLLNGEDRDLIGRMKSILGP 389
RL++TGTPLQN+L EL SLL FM+P +F + +D+ K+ D D+ ++ L
Sbjct: 566 FRLLITGTPLQNNLKELISLLAFMLPKVFDNNMQGLDIIYKIKTTSDGDI---ERAYLSQ 622
Query: 390 FILRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAK-LSDADLAT 448
+ R K+ +M + + + E V + P ++ EY + +++ LS +L
Sbjct: 623 ERISRAKT-IMNPFILRRR-KENVLSDLPP----KIQHVEYCHMEETQLSLYLSVLELKN 676
Query: 449 IVGVLPQRQISNYFVQFRKIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFECTLERVIE 508
+V R+ N +Q RK A H LL R Y+ + + +K++ A+ + + + E
Sbjct: 677 LVNA--NRE--NILMQLRKAALHQLLFRSQYNLETLSLMSKRILREDAY-LDANPQYIFE 731
Query: 509 ELKNYSDFSIHQ 520
+++ SDF +H+
Sbjct: 732 DMEVMSDFELHK 743
>UNIPROTKB|F1PKX5 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000045 "regulation of G1/S transition of
mitotic cell cycle" evidence=IEA] [GO:0071479 "cellular response to
ionizing radiation" evidence=IEA] [GO:0070914 "UV-damage excision
repair" evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
"positive regulation of cell growth" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
DNA replication involved in S phase" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:AAEX03016071 RefSeq:XP_849183.1
Ensembl:ENSCAFT00000015097 GeneID:478262 KEGG:cfa:478262
Uniprot:F1PKX5
Length = 1560
Score = 468 (169.8 bits), Expect = 5.2e-43, P = 5.2e-43
Identities = 122/326 (37%), Positives = 171/326 (52%)
Query: 164 FQPVLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLI 223
F LK YQL G+N+L LY +GI G ILADEMGLGKT+Q+I L L N GP LI
Sbjct: 517 FNGKLKGYQLKGMNWLANLYEQGING-ILADEMGLGKTVQSIALLAHLAERENIWGPFLI 575
Query: 224 VCPASVLENWERELKKWCPSFSVLQYHGA--GRTAYSRELSSLAKAGLPPPFNVLLVCYS 281
+ PAS L NW +E ++ P F VL Y G R R S PF+V++ Y
Sbjct: 576 ISPASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITSYQ 635
Query: 282 LFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTP 341
L VQ D K +R +W +++DEA ALK +S RWK L+ RL+LTGTP
Sbjct: 636 LV----VQ---DVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQF--QCRNRLLLTGTP 686
Query: 342 LQNDLHELWSLLEFMMPDLFATEDV-------DLKKLLNGE---DRDLIGRMKSILGPFI 391
+QN + ELW+LL F+MP LF + + D++ + D + + R+ IL PF+
Sbjct: 687 IQNTMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFM 746
Query: 392 LRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVG 451
LRR+K DV +L KI+ + Y + Q+ Y+ A++ ++ + + A
Sbjct: 747 LRRIKKDVENELSDKIEILMYCQLTSRQKLLYQ-ALKNKISIEDLLQSSMGSTQQAQTT- 804
Query: 452 VLPQRQISNYFVQFRKIANHPLLVRR 477
+ N +QFRK+ NHP L R
Sbjct: 805 ---TSSLMNLVMQFRKVCNHPELFER 827
>UNIPROTKB|E1BAN8 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000045 "regulation of G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0071479 "cellular response to ionizing
radiation" evidence=IEA] [GO:0070914 "UV-damage excision repair"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
"positive regulation of cell growth" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
DNA replication involved in S phase" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:DAAA02028556 EMBL:DAAA02028557 IPI:IPI00685860
RefSeq:NP_001192313.1 UniGene:Bt.55708 Ensembl:ENSBTAT00000013708
GeneID:505992 KEGG:bta:505992 NextBio:20867400 Uniprot:E1BAN8
Length = 1566
Score = 468 (169.8 bits), Expect = 5.3e-43, P = 5.3e-43
Identities = 122/326 (37%), Positives = 171/326 (52%)
Query: 164 FQPVLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLI 223
F LK YQL G+N+L LY +GI G ILADEMGLGKT+Q+I L L N GP LI
Sbjct: 523 FNGKLKGYQLKGMNWLANLYEQGING-ILADEMGLGKTVQSIALLAHLAERENIWGPFLI 581
Query: 224 VCPASVLENWERELKKWCPSFSVLQYHGA--GRTAYSRELSSLAKAGLPPPFNVLLVCYS 281
+ PAS L NW +E ++ P F VL Y G R R S PF+V++ Y
Sbjct: 582 ISPASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITSYQ 641
Query: 282 LFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTP 341
L VQ D K +R +W +++DEA ALK +S RWK L+ RL+LTGTP
Sbjct: 642 LV----VQ---DVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQF--QCRNRLLLTGTP 692
Query: 342 LQNDLHELWSLLEFMMPDLFATEDV-------DLKKLLNGE---DRDLIGRMKSILGPFI 391
+QN + ELW+LL F+MP LF + + D++ + D + + R+ IL PF+
Sbjct: 693 IQNTMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFM 752
Query: 392 LRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVG 451
LRR+K DV +L KI+ + Y + Q+ Y+ A++ ++ + + A
Sbjct: 753 LRRIKKDVENELSDKIEILMYCQLTSRQKLLYQ-ALKNKISIEDLLQSSMGSTQQAQTT- 810
Query: 452 VLPQRQISNYFVQFRKIANHPLLVRR 477
+ N +QFRK+ NHP L R
Sbjct: 811 ---TSSLMNLVMQFRKVCNHPELFER 833
>UNIPROTKB|F1SSV0 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000045 "regulation of G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0071479 "cellular response to ionizing
radiation" evidence=IEA] [GO:0070914 "UV-damage excision repair"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
"positive regulation of cell growth" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
DNA replication involved in S phase" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:FP015925 RefSeq:XP_003121636.1 UniGene:Ssc.45003
Ensembl:ENSSSCT00000005252 GeneID:100517567 KEGG:ssc:100517567
Uniprot:F1SSV0
Length = 1566
Score = 468 (169.8 bits), Expect = 5.3e-43, P = 5.3e-43
Identities = 122/326 (37%), Positives = 171/326 (52%)
Query: 164 FQPVLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLI 223
F LK YQL G+N+L LY +GI G ILADEMGLGKT+Q+I L L N GP LI
Sbjct: 523 FNGKLKGYQLKGMNWLANLYEQGING-ILADEMGLGKTVQSIALLAHLAERENIWGPFLI 581
Query: 224 VCPASVLENWERELKKWCPSFSVLQYHGA--GRTAYSRELSSLAKAGLPPPFNVLLVCYS 281
+ PAS L NW +E ++ P F VL Y G R R S PF+V++ Y
Sbjct: 582 ISPASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITSYQ 641
Query: 282 LFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTP 341
L VQ D K +R +W +++DEA ALK +S RWK L+ RL+LTGTP
Sbjct: 642 LV----VQ---DVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQF--QCRNRLLLTGTP 692
Query: 342 LQNDLHELWSLLEFMMPDLFATEDV-------DLKKLLNGE---DRDLIGRMKSILGPFI 391
+QN + ELW+LL F+MP LF + + D++ + D + + R+ IL PF+
Sbjct: 693 IQNTMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFM 752
Query: 392 LRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVG 451
LRR+K DV +L KI+ + Y + Q+ Y+ A++ ++ + + A
Sbjct: 753 LRRIKKDVENELSDKIEILMYCQLTSRQKLLYQ-ALKNKISIEDLLQSSMGSTQQAQTT- 810
Query: 452 VLPQRQISNYFVQFRKIANHPLLVRR 477
+ N +QFRK+ NHP L R
Sbjct: 811 ---TSSLMNLVMQFRKVCNHPELFER 833
>MGI|MGI:1915392 [details] [associations]
symbol:Ino80 "INO80 homolog (S. cerevisiae)" species:10090
"Mus musculus" [GO:0000070 "mitotic sister chromatid segregation"
evidence=ISO] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003678
"DNA helicase activity" evidence=ISO] [GO:0003779 "actin binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005874 "microtubule" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0010571 "positive regulation of DNA replication involved in S
phase" evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0030307 "positive regulation of cell growth" evidence=ISO]
[GO:0031011 "Ino80 complex" evidence=ISO] [GO:0032508 "DNA duplex
unwinding" evidence=ISO] [GO:0034644 "cellular response to UV"
evidence=ISO] [GO:0043014 "alpha-tubulin binding" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051225 "spindle
assembly" evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
[GO:0070914 "UV-damage excision repair" evidence=ISO] [GO:0071479
"cellular response to ionizing radiation" evidence=ISO] [GO:2000045
"regulation of G1/S transition of mitotic cell cycle" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 MGI:MGI:1915392 GO:GO:0005524
GO:GO:0005634 GO:GO:0030307 GO:GO:0051301 GO:GO:0051225
GO:GO:0003677 GO:GO:0045944 GO:GO:0016887 GO:GO:0006338
GO:GO:0000070 GO:GO:0031011 GO:GO:0000724 GO:GO:0034644
GO:GO:0005874 GO:GO:0071479 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0070914 GO:GO:2000045 GO:GO:0010571 EMBL:AL844862 KO:K11665
CTD:54617 GeneTree:ENSGT00680000100052 HOGENOM:HOG000231795
HOVERGEN:HBG057875 OMA:KVIRKFW OrthoDB:EOG4ZKJKF EMBL:AK040612
EMBL:AK129317 EMBL:BC059235 IPI:IPI00378561 IPI:IPI00785415
RefSeq:NP_080850.2 UniGene:Mm.330496 ProteinModelPortal:Q6ZPV2
SMR:Q6ZPV2 IntAct:Q6ZPV2 STRING:Q6ZPV2 PhosphoSite:Q6ZPV2
PaxDb:Q6ZPV2 PRIDE:Q6ZPV2 Ensembl:ENSMUST00000049920
Ensembl:ENSMUST00000110808 GeneID:68142 KEGG:mmu:68142
InParanoid:Q6ZPV2 NextBio:326516 Bgee:Q6ZPV2 Genevestigator:Q6ZPV2
GermOnline:ENSMUSG00000034154 Uniprot:Q6ZPV2
Length = 1559
Score = 467 (169.5 bits), Expect = 6.7e-43, P = 6.7e-43
Identities = 122/326 (37%), Positives = 171/326 (52%)
Query: 164 FQPVLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLI 223
F LK YQL G+N+L LY +GI G ILADEMGLGKT+Q+I L L N GP LI
Sbjct: 516 FNGKLKGYQLKGMNWLANLYEQGING-ILADEMGLGKTVQSIALLAHLAERENIWGPFLI 574
Query: 224 VCPASVLENWERELKKWCPSFSVLQYHGA--GRTAYSRELSSLAKAGLPPPFNVLLVCYS 281
+ PAS L NW +E ++ P F VL Y G R R S PF+V++ Y
Sbjct: 575 ISPASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITSYQ 634
Query: 282 LFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTP 341
L VQ D K +R +W +++DEA ALK +S RWK L+ RL+LTGTP
Sbjct: 635 LV----VQ---DVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQF--QCRNRLLLTGTP 685
Query: 342 LQNDLHELWSLLEFMMPDLFATEDV-------DLKKLLNGE---DRDLIGRMKSILGPFI 391
+QN + ELW+LL F+MP LF + + D++ + D + + R+ IL PF+
Sbjct: 686 IQNTMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFM 745
Query: 392 LRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVG 451
LRR+K DV +L KI+ + Y + Q+ Y+ A++ ++ + + A
Sbjct: 746 LRRIKKDVENELSDKIEILTYCQLTSRQKLLYQ-ALKNKISIEDLLQSSMGSTQQAQNT- 803
Query: 452 VLPQRQISNYFVQFRKIANHPLLVRR 477
+ N +QFRK+ NHP L R
Sbjct: 804 ---TSSLMNLVMQFRKVCNHPELFER 826
>UNIPROTKB|F1RG74 [details] [associations]
symbol:SRCAP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043234 "protein complex" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005794
GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478 PRINTS:PR00929
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
GeneTree:ENSGT00530000063427 OMA:LGTGNPQ EMBL:FP102572
Ensembl:ENSSSCT00000008537 Uniprot:F1RG74
Length = 3230
Score = 471 (170.9 bits), Expect = 7.0e-43, P = 7.0e-43
Identities = 121/341 (35%), Positives = 193/341 (56%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQ +G+++L+ +Y K + G ILADEMGLGKTIQ I+ L L + GPHLI+ P
Sbjct: 625 LREYQHIGLDWLVTMYEKKLNG-ILADEMGLGKTIQTISLLAHLACEKGNWGPHLIIVPT 683
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
SV+ NWE ELK+WCPSF +L Y+GA + R+L + G P N VC + ++
Sbjct: 684 SVMLNWEMELKRWCPSFKILTYYGAQK---ERKLK---RQGWTKP-NAFHVCITSYKL-- 734
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
V Q D + +R W +++DEA +K+ S RW++L++ N+ +RL+LTGTPLQN L
Sbjct: 735 VLQ--DHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNF--NSQRRLLLTGTPLQNSLM 790
Query: 348 ELWSLLEFMMPDLFATE-------DVDLKKLLNGE---DRDLIGRMKSILGPFILRRLKS 397
ELWSL+ F+MP +F + L ++ G + L+ R+ +L PF+LRR+K
Sbjct: 791 ELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRPFLLRRVKV 850
Query: 398 DVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQ-R 456
DV +Q+ K + V + + Q Y +++ A + + L+ +++ +L Q R
Sbjct: 851 DVEKQMPKKYEHVIRCRLSKRQRCLY----DDFMAQTTTK-ETLATGHFMSVINILMQLR 905
Query: 457 QISNYFVQF--RKIANHPLLVRRI-YSDDDVVRFAKKLHPM 494
++ N+ F R + + P + I +S +V A +HP+
Sbjct: 906 KVCNHPNLFDPRPVTS-PFITPGICFSTASLVLRATDVHPL 945
>UNIPROTKB|E1BC33 [details] [associations]
symbol:LOC788113 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0043234 "protein complex" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00384 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478
PRINTS:PR00929 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GeneTree:ENSGT00530000063427 OMA:LGTGNPQ
EMBL:DAAA02057908 IPI:IPI00705506 Ensembl:ENSBTAT00000018503
Uniprot:E1BC33
Length = 3242
Score = 471 (170.9 bits), Expect = 7.1e-43, P = 7.1e-43
Identities = 121/341 (35%), Positives = 193/341 (56%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQ +G+++L+ +Y K + G ILADEMGLGKTIQ I+ L L + GPHLI+ P
Sbjct: 626 LREYQHIGLDWLVTMYEKKLNG-ILADEMGLGKTIQTISLLAHLACEKGNWGPHLIIVPT 684
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
SV+ NWE ELK+WCPSF +L Y+GA + R+L + G P N VC + ++
Sbjct: 685 SVMLNWEMELKRWCPSFKILTYYGAQK---ERKLK---RQGWTKP-NAFHVCITSYKL-- 735
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
V Q D + +R W +++DEA +K+ S RW++L++ N+ +RL+LTGTPLQN L
Sbjct: 736 VLQ--DHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNF--NSQRRLLLTGTPLQNSLM 791
Query: 348 ELWSLLEFMMPDLFATE-------DVDLKKLLNGE---DRDLIGRMKSILGPFILRRLKS 397
ELWSL+ F+MP +F + L ++ G + L+ R+ +L PF+LRR+K
Sbjct: 792 ELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRPFLLRRVKV 851
Query: 398 DVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQ-R 456
DV +Q+ K + V + + Q Y +++ A + + L+ +++ +L Q R
Sbjct: 852 DVEKQMPKKYEHVIRCRLSKRQRCLY----DDFMAQTTTK-ETLATGHFMSVINILMQLR 906
Query: 457 QISNYFVQF--RKIANHPLLVRRI-YSDDDVVRFAKKLHPM 494
++ N+ F R + + P + I +S +V A +HP+
Sbjct: 907 KVCNHPNLFDPRPVTS-PFITPGICFSTASLVLRATDVHPL 946
>RGD|1308832 [details] [associations]
symbol:Smarca5 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 5"
species:10116 "Rattus norvegicus" [GO:0000183 "chromatin silencing
at rDNA" evidence=ISO] [GO:0000793 "condensed chromosome"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005677 "chromatin silencing complex" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006333 "chromatin assembly or disassembly"
evidence=ISO] [GO:0006334 "nucleosome assembly" evidence=ISO]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0009790
"embryo development" evidence=ISO] [GO:0016584 "nucleosome
positioning" evidence=ISO] [GO:0016589 "NURF complex" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0031213 "RSF
complex" evidence=ISO] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0043596 "nuclear
replication fork" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 RGD:1308832 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 OMA:EDYCHWR
IPI:IPI00359419 PRIDE:F1LNL2 Ensembl:ENSRNOT00000024568
UCSC:RGD:1308832 ArrayExpress:F1LNL2 Uniprot:F1LNL2
Length = 1051
Score = 463 (168.0 bits), Expect = 8.1e-43, P = 8.1e-43
Identities = 111/301 (36%), Positives = 179/301 (59%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQ+ G+N+L+ LY GI G ILADEMGLGKT+Q I+ L +KH N PGPH+++ P
Sbjct: 179 LRDYQVRGLNWLISLYENGING-ILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPK 237
Query: 228 SVLENWERELKKWCPSFSVLQYHG--AGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFER 285
S L NW E K+W P+ + G R A+ R++ LP ++V + Y +
Sbjct: 238 STLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVL------LPGEWDVCVTSYEML-- 289
Query: 286 HSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
+++K + K++ W +++DEAH +K++ S + ++ + N RL+LTGTPLQN+
Sbjct: 290 --IKEKS---VFKKFNWRYLVIDEAHRIKNEKS-KLSEIVREFKTTN-RLLLTGTPLQNN 342
Query: 346 LHELWSLLEFMMPDLF-ATEDVDLKKLLNG--EDRDLIGRMKSILGPFILRRLKSDVMQQ 402
LHELWSLL F++PD+F + +D D N D+ L+ R+ +L PF+LRR+K+DV +
Sbjct: 343 LHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKADVEKS 402
Query: 403 LVPKIQWVEYVTMERPQEDAY-RVAIEEYRAVSRARIAKLSDADLATIVGVLPQ-RQISN 460
L PK + YV + + Q + Y R+ +++ ++ A K+ D ++ +L Q R+ N
Sbjct: 403 LPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSA--GKM---DKMRLLNILMQLRKCCN 457
Query: 461 Y 461
+
Sbjct: 458 H 458
Score = 287 (106.1 bits), Expect = 5.2e-22, P = 5.2e-22
Identities = 70/200 (35%), Positives = 114/200 (57%)
Query: 278 VCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLML 337
VC + +E +++K + K++ W +++DEAH +K++ S + ++ + N RL+L
Sbjct: 281 VCVTSYEM-LIKEKS---VFKKFNWRYLVIDEAHRIKNEKS-KLSEIVREFKTTN-RLLL 334
Query: 338 TGTPLQNDLHELWSLLEFMMPDLF-ATEDVDLKKLLNG--EDRDLIGRMKSILGPFILRR 394
TGTPLQN+LHELWSLL F++PD+F + +D D N D+ L+ R+ +L PF+LRR
Sbjct: 335 TGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRR 394
Query: 395 LKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLP 454
+K+DV + L PK + YV + + Q + Y RI + D D+ G +
Sbjct: 395 IKADVEKSLPPKKEVKIYVGLSKMQREWY------------TRIL-MKDIDILNSAGKMD 441
Query: 455 QRQISNYFVQFRKIANHPLL 474
+ ++ N +Q RK NHP L
Sbjct: 442 KMRLLNILMQLRKCCNHPYL 461
>UNIPROTKB|F1N052 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043596 "nuclear replication fork" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0031213 "RSF
complex" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016589 "NURF complex" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0009790 "embryo development"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005677 "chromatin silencing complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000793 "condensed chromosome"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
GO:GO:0005730 GO:GO:0003677 GO:GO:0006352 GO:GO:0016887
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302
GO:GO:0004386 GO:GO:0000793 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0006334 GO:GO:0005677 GO:GO:0016589
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 OMA:EDYCHWR
GO:GO:0031213 EMBL:DAAA02044371 IPI:IPI00868566 UniGene:Bt.103096
Ensembl:ENSBTAT00000004408 Uniprot:F1N052
Length = 1052
Score = 463 (168.0 bits), Expect = 8.1e-43, P = 8.1e-43
Identities = 111/301 (36%), Positives = 179/301 (59%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQ+ G+N+L+ LY GI G ILADEMGLGKT+Q I+ L +KH N PGPH+++ P
Sbjct: 180 LRDYQVRGLNWLISLYENGING-ILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPK 238
Query: 228 SVLENWERELKKWCPSFSVLQYHG--AGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFER 285
S L NW E K+W P+ + G R A+ R++ LP ++V + Y +
Sbjct: 239 STLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVL------LPGEWDVCVTSYEML-- 290
Query: 286 HSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
+++K + K++ W +++DEAH +K++ S + ++ + N RL+LTGTPLQN+
Sbjct: 291 --IKEKS---VFKKFNWRYLVIDEAHRIKNEKS-KLSEIVREFKTTN-RLLLTGTPLQNN 343
Query: 346 LHELWSLLEFMMPDLF-ATEDVDLKKLLNG--EDRDLIGRMKSILGPFILRRLKSDVMQQ 402
LHELWSLL F++PD+F + +D D N D+ L+ R+ +L PF+LRR+K+DV +
Sbjct: 344 LHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKADVEKS 403
Query: 403 LVPKIQWVEYVTMERPQEDAY-RVAIEEYRAVSRARIAKLSDADLATIVGVLPQ-RQISN 460
L PK + YV + + Q + Y R+ +++ ++ A K+ D ++ +L Q R+ N
Sbjct: 404 LPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSA--GKM---DKMRLLNILMQLRKCCN 458
Query: 461 Y 461
+
Sbjct: 459 H 459
Score = 287 (106.1 bits), Expect = 5.2e-22, P = 5.2e-22
Identities = 70/200 (35%), Positives = 114/200 (57%)
Query: 278 VCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLML 337
VC + +E +++K + K++ W +++DEAH +K++ S + ++ + N RL+L
Sbjct: 282 VCVTSYEM-LIKEKS---VFKKFNWRYLVIDEAHRIKNEKS-KLSEIVREFKTTN-RLLL 335
Query: 338 TGTPLQNDLHELWSLLEFMMPDLF-ATEDVDLKKLLNG--EDRDLIGRMKSILGPFILRR 394
TGTPLQN+LHELWSLL F++PD+F + +D D N D+ L+ R+ +L PF+LRR
Sbjct: 336 TGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRR 395
Query: 395 LKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLP 454
+K+DV + L PK + YV + + Q + Y RI + D D+ G +
Sbjct: 396 IKADVEKSLPPKKEVKIYVGLSKMQREWY------------TRIL-MKDIDILNSAGKMD 442
Query: 455 QRQISNYFVQFRKIANHPLL 474
+ ++ N +Q RK NHP L
Sbjct: 443 KMRLLNILMQLRKCCNHPYL 462
>UNIPROTKB|E2QWV0 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0043596 "nuclear replication fork"
evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0031213 "RSF complex" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=IEA] [GO:0009790
"embryo development" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0006334 "nucleosome
assembly" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005677
"chromatin silencing complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000793 "condensed chromosome" evidence=IEA] [GO:0000183
"chromatin silencing at rDNA" evidence=IEA] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005730
GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302 GO:GO:0004386
GO:GO:0000793 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0031491 GO:GO:0043044 GO:GO:0016584 GO:GO:0006334
GO:GO:0005677 GO:GO:0016589 GeneTree:ENSGT00680000100002 KO:K11654
SUPFAM:SSF101224 OMA:EDYCHWR GO:GO:0031213 CTD:8467
EMBL:AAEX03010002 RefSeq:XP_532676.1 ProteinModelPortal:E2QWV0
Ensembl:ENSCAFT00000012062 GeneID:475451 KEGG:cfa:475451
NextBio:20851293 Uniprot:E2QWV0
Length = 1052
Score = 463 (168.0 bits), Expect = 8.1e-43, P = 8.1e-43
Identities = 111/301 (36%), Positives = 179/301 (59%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQ+ G+N+L+ LY GI G ILADEMGLGKT+Q I+ L +KH N PGPH+++ P
Sbjct: 180 LRDYQVRGLNWLISLYENGING-ILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPK 238
Query: 228 SVLENWERELKKWCPSFSVLQYHG--AGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFER 285
S L NW E K+W P+ + G R A+ R++ LP ++V + Y +
Sbjct: 239 STLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVL------LPGEWDVCVTSYEML-- 290
Query: 286 HSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
+++K + K++ W +++DEAH +K++ S + ++ + N RL+LTGTPLQN+
Sbjct: 291 --IKEKS---VFKKFNWRYLVIDEAHRIKNEKS-KLSEIVREFKTTN-RLLLTGTPLQNN 343
Query: 346 LHELWSLLEFMMPDLF-ATEDVDLKKLLNG--EDRDLIGRMKSILGPFILRRLKSDVMQQ 402
LHELWSLL F++PD+F + +D D N D+ L+ R+ +L PF+LRR+K+DV +
Sbjct: 344 LHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKADVEKS 403
Query: 403 LVPKIQWVEYVTMERPQEDAY-RVAIEEYRAVSRARIAKLSDADLATIVGVLPQ-RQISN 460
L PK + YV + + Q + Y R+ +++ ++ A K+ D ++ +L Q R+ N
Sbjct: 404 LPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSA--GKM---DKMRLLNILMQLRKCCN 458
Query: 461 Y 461
+
Sbjct: 459 H 459
Score = 287 (106.1 bits), Expect = 5.2e-22, P = 5.2e-22
Identities = 70/200 (35%), Positives = 114/200 (57%)
Query: 278 VCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLML 337
VC + +E +++K + K++ W +++DEAH +K++ S + ++ + N RL+L
Sbjct: 282 VCVTSYEM-LIKEKS---VFKKFNWRYLVIDEAHRIKNEKS-KLSEIVREFKTTN-RLLL 335
Query: 338 TGTPLQNDLHELWSLLEFMMPDLF-ATEDVDLKKLLNG--EDRDLIGRMKSILGPFILRR 394
TGTPLQN+LHELWSLL F++PD+F + +D D N D+ L+ R+ +L PF+LRR
Sbjct: 336 TGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRR 395
Query: 395 LKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLP 454
+K+DV + L PK + YV + + Q + Y RI + D D+ G +
Sbjct: 396 IKADVEKSLPPKKEVKIYVGLSKMQREWY------------TRIL-MKDIDILNSAGKMD 442
Query: 455 QRQISNYFVQFRKIANHPLL 474
+ ++ N +Q RK NHP L
Sbjct: 443 KMRLLNILMQLRKCCNHPYL 462
>UNIPROTKB|O60264 [details] [associations]
symbol:SMARCA5 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A member 5"
species:9606 "Homo sapiens" [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000183 "chromatin silencing at rDNA" evidence=IEA] [GO:0005677
"chromatin silencing complex" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA] [GO:0009790 "embryo
development" evidence=IEA] [GO:0006334 "nucleosome assembly"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IDA]
[GO:0016584 "nucleosome positioning" evidence=IDA] [GO:0031213 "RSF
complex" evidence=IPI] [GO:0042393 "histone binding" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IDA] [GO:0000793 "condensed
chromosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0016589 "NURF complex" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0034080
"CENP-A containing nucleosome assembly at centromere" evidence=TAS]
[GO:0043596 "nuclear replication fork" evidence=IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IMP] [GO:0006200 "ATP
catabolic process" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0005730 GO:GO:0003677
GO:GO:0006352 GO:GO:0006357 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009790 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0000183 GO:GO:0006302 GO:GO:0004386 GO:GO:0000793
GO:GO:0034080 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0016584 GO:GO:0005677
GO:GO:0016589 HOGENOM:HOG000192862 KO:K11654 SUPFAM:SSF101224
OMA:EDYCHWR GO:GO:0031213 HOVERGEN:HBG056329 OrthoDB:EOG44J2H9
EMBL:AB010882 EMBL:BC023144 IPI:IPI00297211 RefSeq:NP_003592.3
UniGene:Hs.558422 ProteinModelPortal:O60264 SMR:O60264
IntAct:O60264 MINT:MINT-2981772 STRING:O60264 PhosphoSite:O60264
PaxDb:O60264 PeptideAtlas:O60264 PRIDE:O60264 DNASU:8467
Ensembl:ENST00000283131 GeneID:8467 KEGG:hsa:8467 UCSC:uc003ijg.3
CTD:8467 GeneCards:GC04P144434 HGNC:HGNC:11101 HPA:CAB005227
HPA:HPA008751 MIM:603375 neXtProt:NX_O60264 PharmGKB:PA35951
InParanoid:O60264 PhylomeDB:O60264 GenomeRNAi:8467 NextBio:31688
ArrayExpress:O60264 Bgee:O60264 CleanEx:HS_SMARCA5
Genevestigator:O60264 GermOnline:ENSG00000153147 Uniprot:O60264
Length = 1052
Score = 463 (168.0 bits), Expect = 8.1e-43, P = 8.1e-43
Identities = 111/301 (36%), Positives = 179/301 (59%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQ+ G+N+L+ LY GI G ILADEMGLGKT+Q I+ L +KH N PGPH+++ P
Sbjct: 180 LRDYQVRGLNWLISLYENGING-ILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPK 238
Query: 228 SVLENWERELKKWCPSFSVLQYHG--AGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFER 285
S L NW E K+W P+ + G R A+ R++ LP ++V + Y +
Sbjct: 239 STLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVL------LPGEWDVCVTSYEML-- 290
Query: 286 HSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
+++K + K++ W +++DEAH +K++ S + ++ + N RL+LTGTPLQN+
Sbjct: 291 --IKEKS---VFKKFNWRYLVIDEAHRIKNEKS-KLSEIVREFKTTN-RLLLTGTPLQNN 343
Query: 346 LHELWSLLEFMMPDLF-ATEDVDLKKLLNG--EDRDLIGRMKSILGPFILRRLKSDVMQQ 402
LHELWSLL F++PD+F + +D D N D+ L+ R+ +L PF+LRR+K+DV +
Sbjct: 344 LHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKADVEKS 403
Query: 403 LVPKIQWVEYVTMERPQEDAY-RVAIEEYRAVSRARIAKLSDADLATIVGVLPQ-RQISN 460
L PK + YV + + Q + Y R+ +++ ++ A K+ D ++ +L Q R+ N
Sbjct: 404 LPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSA--GKM---DKMRLLNILMQLRKCCN 458
Query: 461 Y 461
+
Sbjct: 459 H 459
Score = 287 (106.1 bits), Expect = 5.2e-22, P = 5.2e-22
Identities = 70/200 (35%), Positives = 114/200 (57%)
Query: 278 VCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLML 337
VC + +E +++K + K++ W +++DEAH +K++ S + ++ + N RL+L
Sbjct: 282 VCVTSYEM-LIKEKS---VFKKFNWRYLVIDEAHRIKNEKS-KLSEIVREFKTTN-RLLL 335
Query: 338 TGTPLQNDLHELWSLLEFMMPDLF-ATEDVDLKKLLNG--EDRDLIGRMKSILGPFILRR 394
TGTPLQN+LHELWSLL F++PD+F + +D D N D+ L+ R+ +L PF+LRR
Sbjct: 336 TGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRR 395
Query: 395 LKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLP 454
+K+DV + L PK + YV + + Q + Y RI + D D+ G +
Sbjct: 396 IKADVEKSLPPKKEVKIYVGLSKMQREWY------------TRIL-MKDIDILNSAGKMD 442
Query: 455 QRQISNYFVQFRKIANHPLL 474
+ ++ N +Q RK NHP L
Sbjct: 443 KMRLLNILMQLRKCCNHPYL 462
>UNIPROTKB|F1RRG9 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043596 "nuclear replication fork" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0031213 "RSF
complex" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016589 "NURF complex" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0009790 "embryo development"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005677 "chromatin silencing complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000793 "condensed chromosome"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
GO:GO:0005730 GO:GO:0003677 GO:GO:0006352 GO:GO:0016887
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302
GO:GO:0004386 GO:GO:0000793 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0006334 GO:GO:0005677 GO:GO:0016589
GeneTree:ENSGT00680000100002 KO:K11654 SUPFAM:SSF101224 OMA:EDYCHWR
GO:GO:0031213 CTD:8467 EMBL:CU463195 RefSeq:XP_003129222.2
UniGene:Ssc.97261 Ensembl:ENSSSCT00000009907 GeneID:100188903
KEGG:ssc:100188903 ArrayExpress:F1RRG9 Uniprot:F1RRG9
Length = 1052
Score = 463 (168.0 bits), Expect = 8.1e-43, P = 8.1e-43
Identities = 111/301 (36%), Positives = 179/301 (59%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQ+ G+N+L+ LY GI G ILADEMGLGKT+Q I+ L +KH N PGPH+++ P
Sbjct: 180 LRDYQVRGLNWLISLYENGING-ILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPK 238
Query: 228 SVLENWERELKKWCPSFSVLQYHG--AGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFER 285
S L NW E K+W P+ + G R A+ R++ LP ++V + Y +
Sbjct: 239 STLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVL------LPGEWDVCVTSYEML-- 290
Query: 286 HSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
+++K + K++ W +++DEAH +K++ S + ++ + N RL+LTGTPLQN+
Sbjct: 291 --IKEKS---VFKKFNWRYLVIDEAHRIKNEKS-KLSEIVREFKTTN-RLLLTGTPLQNN 343
Query: 346 LHELWSLLEFMMPDLF-ATEDVDLKKLLNG--EDRDLIGRMKSILGPFILRRLKSDVMQQ 402
LHELWSLL F++PD+F + +D D N D+ L+ R+ +L PF+LRR+K+DV +
Sbjct: 344 LHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKADVEKS 403
Query: 403 LVPKIQWVEYVTMERPQEDAY-RVAIEEYRAVSRARIAKLSDADLATIVGVLPQ-RQISN 460
L PK + YV + + Q + Y R+ +++ ++ A K+ D ++ +L Q R+ N
Sbjct: 404 LPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSA--GKM---DKMRLLNILMQLRKCCN 458
Query: 461 Y 461
+
Sbjct: 459 H 459
Score = 287 (106.1 bits), Expect = 5.2e-22, P = 5.2e-22
Identities = 70/200 (35%), Positives = 114/200 (57%)
Query: 278 VCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLML 337
VC + +E +++K + K++ W +++DEAH +K++ S + ++ + N RL+L
Sbjct: 282 VCVTSYEM-LIKEKS---VFKKFNWRYLVIDEAHRIKNEKS-KLSEIVREFKTTN-RLLL 335
Query: 338 TGTPLQNDLHELWSLLEFMMPDLF-ATEDVDLKKLLNG--EDRDLIGRMKSILGPFILRR 394
TGTPLQN+LHELWSLL F++PD+F + +D D N D+ L+ R+ +L PF+LRR
Sbjct: 336 TGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRR 395
Query: 395 LKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLP 454
+K+DV + L PK + YV + + Q + Y RI + D D+ G +
Sbjct: 396 IKADVEKSLPPKKEVKIYVGLSKMQREWY------------TRIL-MKDIDILNSAGKMD 442
Query: 455 QRQISNYFVQFRKIANHPLL 474
+ ++ N +Q RK NHP L
Sbjct: 443 KMRLLNILMQLRKCCNHPYL 462
>UNIPROTKB|Q9ULG1 [details] [associations]
symbol:INO80 "DNA helicase INO80" species:9606 "Homo
sapiens" [GO:0003779 "actin binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0031011 "Ino80 complex" evidence=IDA] [GO:0034644 "cellular
response to UV" evidence=IMP] [GO:0000724 "double-strand break
repair via homologous recombination" evidence=IMP] [GO:0070914
"UV-damage excision repair" evidence=IMP] [GO:0071479 "cellular
response to ionizing radiation" evidence=IMP] [GO:0006302
"double-strand break repair" evidence=IMP] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0030307 "positive regulation of cell growth"
evidence=IMP] [GO:2000045 "regulation of G1/S transition of mitotic
cell cycle" evidence=IMP] [GO:0010571 "positive regulation of DNA
replication involved in S phase" evidence=IMP] [GO:0043014
"alpha-tubulin binding" evidence=IMP] [GO:0051225 "spindle
assembly" evidence=IMP] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0032508 "DNA duplex unwinding" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF13892 PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
GO:GO:0005524 GO:GO:0030307 GO:GO:0051301 GO:GO:0051225
GO:GO:0003677 GO:GO:0045944 GO:GO:0016887 GO:GO:0006338
GO:GO:0000070 GO:GO:0031011 GO:GO:0000724 GO:GO:0034644
GO:GO:0005874 GO:GO:0071479 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043014
GO:GO:0003678 GO:GO:0070914 GO:GO:2000045 EMBL:CH471125
GO:GO:0010571 KO:K11665 CTD:54617 ChiTaRS:INO80 EMBL:AB033085
EMBL:BC146785 EMBL:AL137280 IPI:IPI00008091 PIR:T46350
RefSeq:NP_060023.1 UniGene:Hs.292949 ProteinModelPortal:Q9ULG1
SMR:Q9ULG1 DIP:DIP-34296N IntAct:Q9ULG1 STRING:Q9ULG1
PhosphoSite:Q9ULG1 DMDM:114149322 PaxDb:Q9ULG1 PRIDE:Q9ULG1
Ensembl:ENST00000361937 Ensembl:ENST00000401393 GeneID:54617
KEGG:hsa:54617 UCSC:uc001zni.3 GeneCards:GC15M041271
HGNC:HGNC:26956 MIM:610169 neXtProt:NX_Q9ULG1 PharmGKB:PA162392040
HOGENOM:HOG000231795 HOVERGEN:HBG057875 InParanoid:Q9ULG1
OMA:KVIRKFW OrthoDB:EOG4ZKJKF GenomeRNAi:54617 NextBio:57137
ArrayExpress:Q9ULG1 Bgee:Q9ULG1 CleanEx:HS_INO80
Genevestigator:Q9ULG1 GermOnline:ENSG00000128908 Uniprot:Q9ULG1
Length = 1556
Score = 466 (169.1 bits), Expect = 8.5e-43, P = 8.5e-43
Identities = 122/326 (37%), Positives = 171/326 (52%)
Query: 164 FQPVLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLI 223
F LK YQL G+N+L LY +GI G ILADEMGLGKT+Q+I L L N GP LI
Sbjct: 514 FNGKLKGYQLKGMNWLANLYEQGING-ILADEMGLGKTVQSIALLAHLAERENIWGPFLI 572
Query: 224 VCPASVLENWERELKKWCPSFSVLQYHGA--GRTAYSRELSSLAKAGLPPPFNVLLVCYS 281
+ PAS L NW +E ++ P F VL Y G R R S PF+V++ Y
Sbjct: 573 ISPASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITSYQ 632
Query: 282 LFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTP 341
L VQ D K +R +W +++DEA ALK +S RWK L+ RL+LTGTP
Sbjct: 633 LV----VQ---DVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQF--QCRNRLLLTGTP 683
Query: 342 LQNDLHELWSLLEFMMPDLFATEDV-------DLKKLLNGE---DRDLIGRMKSILGPFI 391
+QN + ELW+LL F+MP LF + + D++ + D + + R+ IL PF+
Sbjct: 684 IQNTMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFM 743
Query: 392 LRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVG 451
LRR+K DV +L KI+ + Y + Q+ Y+ A++ ++ + + A
Sbjct: 744 LRRIKKDVENELSDKIEILMYCQLTSRQKLLYQ-ALKNKISIEDLLQSSMGSTQQAQNT- 801
Query: 452 VLPQRQISNYFVQFRKIANHPLLVRR 477
+ N +QFRK+ NHP L R
Sbjct: 802 ---TSSLMNLVMQFRKVCNHPELFER 824
>GENEDB_PFALCIPARUM|PF08_0048 [details] [associations]
symbol:PF08_0048 "ATP-dependent helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0016020 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
GO:GO:0016568 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GO:GO:0008026 KO:K01509 EMBL:AL844507
RefSeq:XP_002808863.1 EnsemblProtists:PF08_0048:mRNA GeneID:2655499
KEGG:pfa:PF08_0048 EuPathDB:PlasmoDB:PF3D7_0820000 Uniprot:C0H4W3
Length = 2082
Score = 467 (169.5 bits), Expect = 1.0e-42, P = 1.0e-42
Identities = 112/316 (35%), Positives = 178/316 (56%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQ G+++LL LY+ I G ILADEMGLGKT+Q I+ L L + N GPHL++ P
Sbjct: 662 LRDYQHAGLHWLLYLYKNNING-ILADEMGLGKTLQCISLLSYLAYYFNIWGPHLVIVPT 720
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
S+L NWE ELK++CP F +L Y+G Y + + K F++ + YS +
Sbjct: 721 SILINWEIELKRFCPCFKILSYYGNQNERYKKRVGWFNKDS----FHICISSYSTVVK-- 774
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
D + KR RW +++DEAH +K+ N+ RW ++S+ R+ L++TGTPLQN L
Sbjct: 775 -----DHLVFKRKRWKYIILDEAHNIKNFNTKRWNIILSLKRD--NCLLITGTPLQNSLE 827
Query: 348 ELWSLLEFMMPDLFATEDVDLKKL----LN--------GEDRDLIGRMKSILGPFILRRL 395
ELWSLL F+MP++F T +D K+ LN ++LI R+ +++ P+ILRRL
Sbjct: 828 ELWSLLHFLMPNIF-TSHLDFKEWFSDPLNLAIEKSKIHHSKELIDRLHTVIRPYILRRL 886
Query: 396 KSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQ 455
K +V +++ K + + + R Q+ Y +E+ ++ + + + +G++
Sbjct: 887 KKNVEKEMPNKYEHIIKCKLTRRQQILY----DEF--INNKNVQ--NTLNTGNYIGLM-- 936
Query: 456 RQISNYFVQFRKIANH 471
N +Q RK+ NH
Sbjct: 937 ----NILIQLRKVCNH 948
>UNIPROTKB|C0H4W3 [details] [associations]
symbol:PF08_0048 "Probable ATP-dependent helicase
PF08_0048" species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005737 "cytoplasm" evidence=NAS] [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0016020
"membrane" evidence=NAS] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016020
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0016568
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
GO:GO:0008026 KO:K01509 EMBL:AL844507 RefSeq:XP_002808863.1
EnsemblProtists:PF08_0048:mRNA GeneID:2655499 KEGG:pfa:PF08_0048
EuPathDB:PlasmoDB:PF3D7_0820000 Uniprot:C0H4W3
Length = 2082
Score = 467 (169.5 bits), Expect = 1.0e-42, P = 1.0e-42
Identities = 112/316 (35%), Positives = 178/316 (56%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQ G+++LL LY+ I G ILADEMGLGKT+Q I+ L L + N GPHL++ P
Sbjct: 662 LRDYQHAGLHWLLYLYKNNING-ILADEMGLGKTLQCISLLSYLAYYFNIWGPHLVIVPT 720
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
S+L NWE ELK++CP F +L Y+G Y + + K F++ + YS +
Sbjct: 721 SILINWEIELKRFCPCFKILSYYGNQNERYKKRVGWFNKDS----FHICISSYSTVVK-- 774
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
D + KR RW +++DEAH +K+ N+ RW ++S+ R+ L++TGTPLQN L
Sbjct: 775 -----DHLVFKRKRWKYIILDEAHNIKNFNTKRWNIILSLKRD--NCLLITGTPLQNSLE 827
Query: 348 ELWSLLEFMMPDLFATEDVDLKKL----LN--------GEDRDLIGRMKSILGPFILRRL 395
ELWSLL F+MP++F T +D K+ LN ++LI R+ +++ P+ILRRL
Sbjct: 828 ELWSLLHFLMPNIF-TSHLDFKEWFSDPLNLAIEKSKIHHSKELIDRLHTVIRPYILRRL 886
Query: 396 KSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQ 455
K +V +++ K + + + R Q+ Y +E+ ++ + + + +G++
Sbjct: 887 KKNVEKEMPNKYEHIIKCKLTRRQQILY----DEF--INNKNVQ--NTLNTGNYIGLM-- 936
Query: 456 RQISNYFVQFRKIANH 471
N +Q RK+ NH
Sbjct: 937 ----NILIQLRKVCNH 948
>UNIPROTKB|F1P3Q4 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007420 "brain development" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0016589 "NURF
complex" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0036310 "annealing helicase activity"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044
GO:GO:0016589 GO:GO:0008094 GeneTree:ENSGT00680000100002
SUPFAM:SSF101224 OMA:PMSQKRK EMBL:AADN02013587 EMBL:AADN02013588
IPI:IPI00594974 Ensembl:ENSGALT00000013737 Uniprot:F1P3Q4
Length = 982
Score = 461 (167.3 bits), Expect = 1.1e-42, P = 1.1e-42
Identities = 108/303 (35%), Positives = 179/303 (59%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQ+ G+N+++ LY G+ G ILADEMGLGKT+Q I L LKH N PGPH+++ P
Sbjct: 107 LRDYQVRGLNWMISLYENGVNG-ILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPK 165
Query: 228 SVLENWERELKKWCPSFSVLQYHGA--GRTAYSRELSSLAKAGLPPPFNVLLVCYSLFER 285
S L NW E K+W PS + G R A+ R++ +P ++V + Y +
Sbjct: 166 STLHNWMNEFKRWVPSLRAVCLIGDKDARAAFIRDVM------MPGEWDVCVTSYEMV-- 217
Query: 286 HSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
+++K + K++ W +++DEAH +K++ S + ++ + N RL+LTGTPLQN+
Sbjct: 218 --IKEKS---VFKKFNWRYLVIDEAHRIKNEKS-KLSEIVREFKTTN-RLLLTGTPLQNN 270
Query: 346 LHELWSLLEFMMPDLFATED-----VDLKKLLNGEDRDLIGRMKSILGPFILRRLKSDVM 400
LHELW+LL F++PD+F + D D K L D+ L+ R+ ++L PF+LRR+K++V
Sbjct: 271 LHELWALLNFLLPDVFNSADDFDSWFDTKNCLG--DQKLVERLHAVLKPFLLRRIKAEVE 328
Query: 401 QQLVPKIQWVEYVTMERPQEDAY-RVAIEEYRAVSRARIAKLSDADLATIVGVLPQ-RQI 458
+ L PK + Y+ + + Q + Y R+ +++ ++ A K+ D ++ +L Q R+
Sbjct: 329 KSLPPKKEVKIYLGLSKMQREWYTRILMKDIDILNSA--GKM---DKMRLLNILMQLRKC 383
Query: 459 SNY 461
N+
Sbjct: 384 CNH 386
Score = 282 (104.3 bits), Expect = 1.7e-21, P = 1.7e-21
Identities = 68/202 (33%), Positives = 115/202 (56%)
Query: 278 VCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLML 337
VC + +E +++K + K++ W +++DEAH +K++ S + ++ + N RL+L
Sbjct: 209 VCVTSYEM-VIKEKS---VFKKFNWRYLVIDEAHRIKNEKS-KLSEIVREFKTTN-RLLL 262
Query: 338 TGTPLQNDLHELWSLLEFMMPDLFATED-----VDLKKLLNGEDRDLIGRMKSILGPFIL 392
TGTPLQN+LHELW+LL F++PD+F + D D K L D+ L+ R+ ++L PF+L
Sbjct: 263 TGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLG--DQKLVERLHAVLKPFLL 320
Query: 393 RRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGV 452
RR+K++V + L PK + Y+ + + Q + Y RI + D D+ G
Sbjct: 321 RRIKAEVEKSLPPKKEVKIYLGLSKMQREWY------------TRIL-MKDIDILNSAGK 367
Query: 453 LPQRQISNYFVQFRKIANHPLL 474
+ + ++ N +Q RK NHP L
Sbjct: 368 MDKMRLLNILMQLRKCCNHPYL 389
>ZFIN|ZDB-GENE-041014-72 [details] [associations]
symbol:ino80 "INO80 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
ZFIN:ZDB-GENE-041014-72 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:BX897725
HOGENOM:HOG000231795 HOVERGEN:HBG057875 OMA:KVIRKFW IPI:IPI00516098
UniGene:Dr.84310 ProteinModelPortal:Q5RGG8 STRING:Q5RGG8
InParanoid:Q5RGG8 Uniprot:Q5RGG8
Length = 1582
Score = 465 (168.7 bits), Expect = 1.1e-42, P = 1.1e-42
Identities = 122/326 (37%), Positives = 170/326 (52%)
Query: 164 FQPVLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLI 223
F LK YQL G+N+L LY +GI G ILADEMGLGKT+Q+I L L N GP LI
Sbjct: 515 FNGKLKGYQLKGMNWLANLYEQGING-ILADEMGLGKTVQSIALLAHLAERENIWGPFLI 573
Query: 224 VCPASVLENWERELKKWCPSFSVLQYHGA--GRTAYSRELSSLAKAGLPPPFNVLLVCYS 281
+ PAS L NW +E ++ P F VL Y G R + S PF+V++ Y
Sbjct: 574 ISPASTLNNWHQEFSRFVPKFKVLPYWGNPHDRKVIRKFWSQKTLYTQNAPFHVVITSYQ 633
Query: 282 LFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTP 341
L VQ D K +R +W +++DEA ALK S RWK L+ RL+LTGTP
Sbjct: 634 LV----VQ---DVKYFQRVKWQYMVLDEAQALKSSTSVRWKILLQF--QCRNRLLLTGTP 684
Query: 342 LQNDLHELWSLLEFMMPDLFATEDV-------DLKKLLNGE---DRDLIGRMKSILGPFI 391
+QN + ELW+LL F+MP LF + + D++ + D + + R+ IL PF+
Sbjct: 685 IQNTMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFM 744
Query: 392 LRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVG 451
LRR+K DV +L KI+ + Y + Q Y+ A++ ++ + + A A
Sbjct: 745 LRRIKKDVENELSDKIEILTYCQLTSRQRLLYQ-ALKNKISIEDLLQSSMGSAQQAHST- 802
Query: 452 VLPQRQISNYFVQFRKIANHPLLVRR 477
+ N +QFRK+ NHP L R
Sbjct: 803 ---TSSLMNLVMQFRKVCNHPDLFER 825
>UNIPROTKB|F1NYY9 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0010571 "positive
regulation of DNA replication involved in S phase" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0030307 "positive
regulation of cell growth" evidence=IEA] [GO:0031011 "Ino80
complex" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0043014 "alpha-tubulin binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051225 "spindle
assembly" evidence=IEA] [GO:0070914 "UV-damage excision repair"
evidence=IEA] [GO:0071479 "cellular response to ionizing radiation"
evidence=IEA] [GO:2000045 "regulation of G1/S transition of mitotic
cell cycle" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003678 "DNA helicase activity"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 GO:GO:0005524
GO:GO:0030307 GO:GO:0051225 GO:GO:0003677 GO:GO:0045944
GO:GO:0016887 GO:GO:0006338 GO:GO:0000070 GO:GO:0031011
GO:GO:0000724 GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914
GO:GO:2000045 GO:GO:0010571 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:AADN02033529 EMBL:AADN02033530 IPI:IPI00604387
Ensembl:ENSGALT00000013933 Uniprot:F1NYY9
Length = 1564
Score = 463 (168.0 bits), Expect = 1.8e-42, P = 1.8e-42
Identities = 123/327 (37%), Positives = 172/327 (52%)
Query: 164 FQPVLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLI 223
F LK YQL G+N+L LY +GI G ILADEMGLGKT+Q+I L L N GP LI
Sbjct: 519 FNGKLKGYQLKGMNWLANLYEQGING-ILADEMGLGKTVQSIALLAHLAERENIWGPFLI 577
Query: 224 VCPASVLENWERELKKWCPSFSVLQYHGA--GRTAYSRELSSLAKAGLPPPFNVLLVCYS 281
+ PAS L NW +E ++ P F VL Y G R + S PF+V++ Y
Sbjct: 578 ISPASTLNNWHQEFARFVPKFKVLPYWGNPHDRKVIRKFWSQKTLYTQDAPFHVVITSYQ 637
Query: 282 LFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTP 341
L VQ D K +R +W +++DEA ALK +S RWK L+ RL+LTGTP
Sbjct: 638 LV----VQ---DVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQF--QCRNRLLLTGTP 688
Query: 342 LQNDLHELWSLLEFMMPDLFATEDV-------DLKKLLNGE---DRDLIGRMKSILGPFI 391
+QN + ELW+LL F+MP LF + + D++ + D + + R+ IL PF+
Sbjct: 689 IQNTMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFM 748
Query: 392 LRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVG 451
LRR+K DV +L KI+ + Y Q+ Y+ A++ ++ I L + + T
Sbjct: 749 LRRIKKDVENELSDKIEILMYCQQTSRQKLLYQ-ALK-----NKISIDDLLQSSMGTTQQ 802
Query: 452 V-LPQRQISNYFVQFRKIANHPLLVRR 477
+ N +QFRK+ NHP L R
Sbjct: 803 AQTTTSSLMNLVMQFRKVCNHPELFER 829
>ZFIN|ZDB-GENE-070705-296 [details] [associations]
symbol:si:dkey-148b12.1 "si:dkey-148b12.1"
species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 ZFIN:ZDB-GENE-070705-296 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
SUPFAM:SSF101224 HOVERGEN:HBG056329 KO:K11727 OrthoDB:EOG44J2H9
EMBL:CR848717 EMBL:CU104724 IPI:IPI00488326 RefSeq:NP_001093467.1
UniGene:Dr.81160 SMR:A5WUY4 Ensembl:ENSDART00000020725
GeneID:559803 KEGG:dre:559803 OMA:IGHAWIN NextBio:20883144
Uniprot:A5WUY4
Length = 1036
Score = 459 (166.6 bits), Expect = 2.1e-42, P = 2.1e-42
Identities = 110/302 (36%), Positives = 176/302 (58%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQ+ G+N+++ LY GI G ILADEMGLGKT+Q I L LKH N PGPH+++ P
Sbjct: 143 LRDYQIRGLNWMISLYENGING-ILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPK 201
Query: 228 SVLENWERELKKWCPSFSVLQYHGAG--RTAYSRELSSLAKAGLPPPFNVLLVCYSLFER 285
S L NW E K+W P+ + G R A+ R++ +P ++V + Y + R
Sbjct: 202 STLHNWMNEFKRWVPTLKAVCLIGNKDERAAFIRDVM------MPGEWDVCVTSYEMVIR 255
Query: 286 HSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARN--ANQRLMLTGTPLQ 343
++ + K++ W +++DEAH +K++ S L +AR RL+LTGTPLQ
Sbjct: 256 -------EKSVFKKFNWRYLVIDEAHRIKNEKS----KLSEIAREFKTTNRLLLTGTPLQ 304
Query: 344 NDLHELWSLLEFMMPDLF-ATEDVDLKKLLNG-EDRDLIGRMKSILGPFILRRLKSDVMQ 401
N+LHELWSLL F++PD+F + D D N D+ L+ R+ ++L PF+LRR+K++V +
Sbjct: 305 NNLHELWSLLNFLLPDVFNSASDFDSWFDTNCLGDQKLVERLHAVLRPFLLRRIKAEVEK 364
Query: 402 QLVPKIQWVEYVTMERPQEDAY-RVAIEEYRAVSRARIAKLSDADLATIVGVLPQ-RQIS 459
L PK + Y+ + + Q + Y R+ +++ ++ A K+ D ++ +L Q R+
Sbjct: 365 SLPPKKEVKIYLGLSKMQREWYTRILMKDIDILNSA--GKM---DKMRLLNILMQLRKCC 419
Query: 460 NY 461
N+
Sbjct: 420 NH 421
Score = 279 (103.3 bits), Expect = 4.1e-21, P = 4.1e-21
Identities = 66/186 (35%), Positives = 106/186 (56%)
Query: 293 DRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARN--ANQRLMLTGTPLQNDLHELW 350
++ + K++ W +++DEAH +K++ S L +AR RL+LTGTPLQN+LHELW
Sbjct: 256 EKSVFKKFNWRYLVIDEAHRIKNEKS----KLSEIAREFKTTNRLLLTGTPLQNNLHELW 311
Query: 351 SLLEFMMPDLF-ATEDVDLKKLLNG-EDRDLIGRMKSILGPFILRRLKSDVMQQLVPKIQ 408
SLL F++PD+F + D D N D+ L+ R+ ++L PF+LRR+K++V + L PK +
Sbjct: 312 SLLNFLLPDVFNSASDFDSWFDTNCLGDQKLVERLHAVLRPFLLRRIKAEVEKSLPPKKE 371
Query: 409 WVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQISNYFVQFRKI 468
Y+ + + Q + Y RI + D D+ G + + ++ N +Q RK
Sbjct: 372 VKIYLGLSKMQREWY------------TRIL-MKDIDILNSAGKMDKMRLLNILMQLRKC 418
Query: 469 ANHPLL 474
NHP L
Sbjct: 419 CNHPYL 424
>RGD|1310969 [details] [associations]
symbol:Ino80 "INO80 homolog (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0000070 "mitotic sister chromatid
segregation" evidence=ISO] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IEA;ISO] [GO:0003678 "DNA helicase activity"
evidence=ISO] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0006302 "double-strand break repair" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0010571 "positive
regulation of DNA replication involved in S phase" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0030307 "positive
regulation of cell growth" evidence=ISO] [GO:0031011 "Ino80
complex" evidence=ISO] [GO:0032508 "DNA duplex unwinding"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043014 "alpha-tubulin binding" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0070914 "UV-damage excision repair" evidence=ISO]
[GO:0071479 "cellular response to ionizing radiation" evidence=ISO]
[GO:2000045 "regulation of G1/S transition of mitotic cell cycle"
evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 RGD:1310969
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00680000100052
IPI:IPI00569811 Ensembl:ENSRNOT00000031672 UCSC:RGD:1310969
Uniprot:D4A6Q6
Length = 1553
Score = 462 (167.7 bits), Expect = 2.3e-42, P = 2.3e-42
Identities = 120/324 (37%), Positives = 171/324 (52%)
Query: 164 FQPVLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLI 223
F LK YQL G+N+L LY +GI G ILADEMGLGKT+Q+I L L N GP LI
Sbjct: 516 FNGKLKGYQLKGMNWLANLYEQGING-ILADEMGLGKTVQSIALLAHLAERENIWGPFLI 574
Query: 224 VCPASVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLF 283
+ PAS L NW +E ++ P F VL Y G ++ A PF+V++ Y L
Sbjct: 575 ISPASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKKKKTLYTQDA----PFHVVITSYQLV 630
Query: 284 ERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQ 343
VQ D K +R +W +++DEA ALK +S RWK L+ RL+LTGTP+Q
Sbjct: 631 ----VQ---DVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQF--QCRNRLLLTGTPIQ 681
Query: 344 NDLHELWSLLEFMMPDLFATEDV-------DLKKLLNGE---DRDLIGRMKSILGPFILR 393
N + ELW+LL F+MP LF + + D++ + D + + R+ IL PF+LR
Sbjct: 682 NTMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLR 741
Query: 394 RLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVL 453
R+K DV +L KI+ + Y + Q+ Y+ A++ ++ + + A
Sbjct: 742 RIKKDVENELSDKIEILMYCQLTSRQKLLYQ-ALKNKISIEDLLQSSMGSTQQAQNT--- 797
Query: 454 PQRQISNYFVQFRKIANHPLLVRR 477
+ N +QFRK+ NHP L R
Sbjct: 798 -TSSLMNLVMQFRKVCNHPELFER 820
>TAIR|locus:2182978 [details] [associations]
symbol:CHR17 "chromatin remodeling factor17" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0005829 "cytosol" evidence=RCA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] [GO:0006259 "DNA metabolic
process" evidence=RCA] [GO:0006261 "DNA-dependent DNA replication"
evidence=RCA] [GO:0006306 "DNA methylation" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0008283 "cell
proliferation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0016246 "RNA interference" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0031047
"gene silencing by RNA" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] [GO:0051567 "histone H3-K9
methylation" evidence=RCA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=IGI] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 EMBL:CP002688 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 GO:GO:0010228 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 KO:K11654 OMA:MQRKWYK SUPFAM:SSF101224
IPI:IPI00547773 RefSeq:NP_850847.1 UniGene:At.19176
ProteinModelPortal:F4JY25 SMR:F4JY25 IntAct:F4JY25 PRIDE:F4JY25
EnsemblPlants:AT5G18620.2 GeneID:831980 KEGG:ath:AT5G18620
PhylomeDB:F4JY25 Uniprot:F4JY25
Length = 1072
Score = 459 (166.6 bits), Expect = 2.3e-42, P = 2.3e-42
Identities = 104/269 (38%), Positives = 167/269 (62%)
Query: 165 QPVLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIV 224
Q L+ YQL G+N+L+ LY GI G ILADEMGLGKT+Q I+ L L GPH++V
Sbjct: 191 QGKLRDYQLAGLNWLIRLYENGING-ILADEMGLGKTLQTISLLAYLHEYRGINGPHMVV 249
Query: 225 CPASVLENWERELKKWCPSFSVLQYHG-AGRTAYSRELSSLAKAGLPPPFNVLLVCYSLF 283
P S L NW E++++CP +++ G + RE L AG F++ C + F
Sbjct: 250 APKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE--ELLVAG---KFDI---CVTSF 301
Query: 284 ERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQ 343
E ++++K L+R+ W +++DEAH +K++NS K + + N RL++TGTPLQ
Sbjct: 302 EM-AIKEKTT---LRRFSWRYIIIDEAHRIKNENSLLSKTMRLFS--TNYRLLITGTPLQ 355
Query: 344 NDLHELWSLLEFMMPDLFAT-EDVDLKKLLNGED--RDLIGRMKSILGPFILRRLKSDVM 400
N+LHELW+LL F++P++F++ E D ++GE+ ++++ ++ +L PF+LRRLKSDV
Sbjct: 356 NNLHELWALLNFLLPEVFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVE 415
Query: 401 QQLVPKIQWVEYVTMERPQEDAYRVAIEE 429
+ L PK + + V M + Q+ Y+ +++
Sbjct: 416 KGLPPKKETILKVGMSQMQKQYYKALLQK 444
Score = 283 (104.7 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 64/185 (34%), Positives = 112/185 (60%)
Query: 293 DRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSL 352
++ L+R+ W +++DEAH +K++NS K + + N RL++TGTPLQN+LHELW+L
Sbjct: 307 EKTTLRRFSWRYIIIDEAHRIKNENSLLSKTMRLFS--TNYRLLITGTPLQNNLHELWAL 364
Query: 353 LEFMMPDLFAT-EDVDLKKLLNGED--RDLIGRMKSILGPFILRRLKSDVMQQLVPKIQW 409
L F++P++F++ E D ++GE+ ++++ ++ +L PF+LRRLKSDV + L PK +
Sbjct: 365 LNFLLPEVFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKET 424
Query: 410 VEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQISNYFVQFRKIA 469
+ V M + Q+ Y+ +++ DL + G ++++ N +Q RK
Sbjct: 425 ILKVGMSQMQKQYYKALLQK---------------DLEVVNGGGERKRLLNIAMQLRKCC 469
Query: 470 NHPLL 474
NHP L
Sbjct: 470 NHPYL 474
>SGD|S000005831 [details] [associations]
symbol:ISW2 "ATP-dependent DNA translocase involved in
chromatin remodeling" species:4932 "Saccharomyces cerevisiae"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA;IPI] [GO:0006338 "chromatin remodeling"
evidence=IEA;IGI;IMP;IPI] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0060195 "negative
regulation of antisense RNA transcription" evidence=IGI]
[GO:0016584 "nucleosome positioning" evidence=IDA] [GO:0008623
"CHRAC" evidence=ISS;IPI] [GO:0046020 "negative regulation of
transcription from RNA polymerase II promoter by pheromones"
evidence=IMP] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0000183
"chromatin silencing at rDNA" evidence=IMP] [GO:0015616 "DNA
translocase activity" evidence=IDA] [GO:0003697 "single-stranded
DNA binding" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IGI]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 SGD:S000005831 GO:GO:0005524 EMBL:BK006948
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0003697
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006348
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0008623 GO:GO:0006369 GO:GO:0046020 GO:GO:0060195
GO:GO:0015616 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
SUPFAM:SSF101224 OrthoDB:EOG48SM27 EMBL:Z75212 PIR:S67208
RefSeq:NP_014948.1 ProteinModelPortal:Q08773 SMR:Q08773
DIP:DIP-6603N IntAct:Q08773 MINT:MINT-469536 STRING:Q08773
PaxDb:Q08773 PeptideAtlas:Q08773 PRIDE:Q08773 EnsemblFungi:YOR304W
GeneID:854480 KEGG:sce:YOR304W CYGD:YOR304w OMA:NEQSALS
NextBio:976792 Genevestigator:Q08773 GermOnline:YOR304W
Uniprot:Q08773
Length = 1120
Score = 458 (166.3 bits), Expect = 3.2e-42, P = 3.2e-42
Identities = 109/298 (36%), Positives = 173/298 (58%)
Query: 138 AEVEASSVRIVTQSDIDDACGDEDSDF--QPVLKPYQLVGVNFLLLLYRKGIAGAILADE 195
AE+ A + + +D E F L+ YQ+ G+N+L+ L+ ++G ILADE
Sbjct: 152 AELMADEEEEIVDTYQEDIFVSESPSFVKSGKLRDYQVQGLNWLISLHENKLSG-ILADE 210
Query: 196 MGLGKTIQAITYLMLLKHLNNDPGPHLIVCPASVLENWERELKKWCPSFSVLQYHGAGRT 255
MGLGKT+Q I++L L+++ GP LI+ P S L+NW RE KW P+ +VL HG T
Sbjct: 211 MGLGKTLQTISFLGYLRYVKQIEGPFLIIVPKSTLDNWRREFLKWTPNVNVLVLHGDKDT 270
Query: 256 AYSRELSSLAKAGLPPPFNVLLVCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKD 315
+ + +A F+VL+ Y + R ++ LKR W +++DEAH +K+
Sbjct: 271 RADIVRNIILEAR----FDVLITSYEMVIR-------EKNALKRLAWQYIVIDEAHRIKN 319
Query: 316 KNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSLLEFMMPDLFATEDV-DLKKLLNG 374
+ S ++ + + N RL++TGTPLQN+LHELW+LL F++PD+F ++ D N
Sbjct: 320 EQS-ALSQIIRLFYSKN-RLLITGTPLQNNLHELWALLNFLLPDIFGDSELFDEWFEQNN 377
Query: 375 EDRD---LIGRMKSILGPFILRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEE 429
++D +I ++ S+L PF+LRR+K+DV + L+PKI+ YV M Q Y+ +E+
Sbjct: 378 SEQDQEIVIQQLHSVLNPFLLRRVKADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEK 435
Score = 273 (101.2 bits), Expect = 2.2e-20, P = 2.2e-20
Identities = 72/207 (34%), Positives = 119/207 (57%)
Query: 273 FNVLLVCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNAN 332
F+VL+ Y + R ++ LKR W +++DEAH +K++ S ++ + + N
Sbjct: 284 FDVLITSYEMVIR-------EKNALKRLAWQYIVIDEAHRIKNEQS-ALSQIIRLFYSKN 335
Query: 333 QRLMLTGTPLQNDLHELWSLLEFMMPDLFATEDV--DLKKLLNGE-DRDL-IGRMKSILG 388
RL++TGTPLQN+LHELW+LL F++PD+F ++ + + N E D+++ I ++ S+L
Sbjct: 336 -RLLITGTPLQNNLHELWALLNFLLPDIFGDSELFDEWFEQNNSEQDQEIVIQQLHSVLN 394
Query: 389 PFILRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIE-EYRAVSRARIAKLSDADLA 447
PF+LRR+K+DV + L+PKI+ YV M Q Y+ +E + AV+ A + K
Sbjct: 395 PFLLRRVKADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDIDAVNGA-VGKREG---- 449
Query: 448 TIVGVLPQRQISNYFVQFRKIANHPLL 474
+ ++ N +Q RK NHP L
Sbjct: 450 -------KTRLLNIVMQLRKCCNHPYL 469
>SGD|S000003118 [details] [associations]
symbol:INO80 "ATPase and nucleosome spacing factor"
species:4932 "Saccharomyces cerevisiae" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA;IMP;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0042766 "nucleosome mobilization" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0043486 "histone exchange"
evidence=IDA] [GO:0043140 "ATP-dependent 3'-5' DNA helicase
activity" evidence=IDA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IMP;IDA] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0043618 "regulation of transcription from RNA polymerase II
promoter in response to stress" evidence=IMP] [GO:0016584
"nucleosome positioning" evidence=IDA] [GO:0031011 "Ino80 complex"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 SGD:S000003118
GO:GO:0005524 EMBL:BK006941 GO:GO:0003677 GO:GO:0006281
GO:GO:0045944 GO:GO:0016887 GO:GO:0006366 GO:GO:0031011
GO:GO:0006348 GO:GO:0004386 GO:GO:0043486 GO:GO:0042766 EMBL:Z48618
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:X99960 GO:GO:0016584 GO:GO:0043618 KO:K11665
GeneTree:ENSGT00680000100052 HOGENOM:HOG000048482 OrthoDB:EOG41G6C8
EMBL:Z72672 PIR:S60416 RefSeq:NP_011365.1 ProteinModelPortal:P53115
SMR:P53115 DIP:DIP-1386N IntAct:P53115 MINT:MINT-388693
STRING:P53115 PaxDb:P53115 PeptideAtlas:P53115 EnsemblFungi:YGL150C
GeneID:852728 KEGG:sce:YGL150C CYGD:YGL150c OMA:DEFSDWF
NextBio:972117 Genevestigator:P53115 GermOnline:YGL150C
Uniprot:P53115
Length = 1489
Score = 460 (167.0 bits), Expect = 3.4e-42, P = 3.4e-42
Identities = 120/327 (36%), Positives = 175/327 (53%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
LK YQL G+N+L LY +GI G ILADEMGLGKT+Q+I+ L L +N GP L+V PA
Sbjct: 706 LKEYQLKGLNWLANLYDQGING-ILADEMGLGKTVQSISVLAHLAENHNIWGPFLVVTPA 764
Query: 228 SVLENWERELKKWCPSFSVLQYHG-AGRTAYSREL--SSLAKAGLPPPFNVLLVCYSLFE 284
S L NW E+ K+ P F +L Y G A R+ + PF+V++ Y +
Sbjct: 765 STLHNWVNEISKFLPQFKILPYWGNANDRKVLRKFWDRKNLRYNKNAPFHVMVTSYQMVV 824
Query: 285 RHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQN 344
D L++ +W +++DEA A+K S RWKNL+S + RL+LTGTP+QN
Sbjct: 825 T-------DANYLQKMKWQYMILDEAQAIKSSQSSRWKNLLSF--HCRNRLLLTGTPIQN 875
Query: 345 DLHELWSLLEFMMPDLFATEDV-------DLKKLLNGE---DRDLIGRMKSILGPFILRR 394
+ ELW+LL F+MP LF + D D++ ++ + R+ IL PF+LRR
Sbjct: 876 SMQELWALLHFIMPSLFDSHDEFNEWFSKDIESHAEANTKLNQQQLRRLHMILKPFMLRR 935
Query: 395 LKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEE----YRAVSRARIAKLSDADLATIV 450
+K +V +L KI+ + + Q Y+V + Y A+ A S ++ A+
Sbjct: 936 VKKNVQSELGDKIEIDVLCDLTQRQAKLYQVLKSQISTNYDAIENAATND-STSNSASNS 994
Query: 451 GVLPQRQISNYFVQFRKIANHPLLVRR 477
G + + N +QFRK+ NHP L R
Sbjct: 995 G--SDQNLINAVMQFRKVCNHPDLFER 1019
>CGD|CAL0005422 [details] [associations]
symbol:ISW2 species:5476 "Candida albicans" [GO:0001410
"chlamydospore formation" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0071280 "cellular response to copper ion"
evidence=IMP] [GO:0035690 "cellular response to drug" evidence=IMP]
[GO:0008623 "CHRAC" evidence=IEA] [GO:0060195 "negative regulation
of antisense RNA transcription" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0000183 "chromatin
silencing at rDNA" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0046020 "negative
regulation of transcription from RNA polymerase II promoter by
pheromones" evidence=IEA] [GO:0006348 "chromatin silencing at
telomere" evidence=IEA] [GO:0016584 "nucleosome positioning"
evidence=IEA] [GO:0015616 "DNA translocase activity" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 CGD:CAL0005422 GO:GO:0005524
GO:GO:0001410 GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0071280 GO:GO:0035690 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0004386 EMBL:AACQ01000074 GO:GO:0030447 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224 RefSeq:XP_716066.1
ProteinModelPortal:Q5A310 STRING:Q5A310 GeneID:3642235
KEGG:cal:CaO19.7401 Uniprot:Q5A310
Length = 1056
Score = 453 (164.5 bits), Expect = 9.7e-42, P = 9.7e-42
Identities = 111/326 (34%), Positives = 188/326 (57%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQ+ G+N+L+ LY ++G ILADEMGLGKT+Q I++L L+++ + GP +++ P
Sbjct: 139 LREYQIQGLNWLISLYENRLSG-ILADEMGLGKTLQTISFLGYLRYIKHIDGPFIVIVPK 197
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGL-PPPFNVLLVCYSLFERH 286
S L+NW RE KW P +V+ G + +S+ K L F+VL+ + + R
Sbjct: 198 STLDNWRREFAKWTPDVNVVVLQGD-----KEQRASIIKDQLYTAKFDVLITSFEMILR- 251
Query: 287 SVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNL-MSVARNANQRLMLTGTPLQND 345
++ L+++RW +++DEAH +K+++S K + + +RN RL++TGTPLQN+
Sbjct: 252 ------EKSALQKFRWEYIVVDEAHRIKNEDSSLSKIIRLFYSRN---RLLITGTPLQNN 302
Query: 346 LHELWSLLEFMMPDLFA-------------TEDVDLKKLLNGEDRDLIGRMKSILGPFIL 392
LHELW+LL F++PD+F +E++D ++ +D+ + + +L PF+L
Sbjct: 303 LHELWALLNFLLPDVFGDSDQFDEAFDNQNSEELDEEEKQRRQDK-AVSELHQLLSPFLL 361
Query: 393 RRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGV 452
RR+K+DV + L+PKI+ Y+ M Q +E Y+ +L + D+ + GV
Sbjct: 362 RRVKADVEKSLLPKIETNVYIGMTDMQ-------VEWYK--------RLLEKDIDAVNGV 406
Query: 453 LPQRQ----ISNYFVQFRKIANHPLL 474
+ +R+ + N +Q RK NHP L
Sbjct: 407 VGKREGKTRLLNIVMQLRKCCNHPYL 432
>UNIPROTKB|Q5A310 [details] [associations]
symbol:ISW2 "Putative uncharacterized protein ISW2"
species:237561 "Candida albicans SC5314" [GO:0001410 "chlamydospore
formation" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0035690 "cellular response to drug" evidence=IMP]
[GO:0071280 "cellular response to copper ion" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 CGD:CAL0005422 GO:GO:0005524
GO:GO:0001410 GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0071280 GO:GO:0035690 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0004386 EMBL:AACQ01000074 GO:GO:0030447 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224 RefSeq:XP_716066.1
ProteinModelPortal:Q5A310 STRING:Q5A310 GeneID:3642235
KEGG:cal:CaO19.7401 Uniprot:Q5A310
Length = 1056
Score = 453 (164.5 bits), Expect = 9.7e-42, P = 9.7e-42
Identities = 111/326 (34%), Positives = 188/326 (57%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQ+ G+N+L+ LY ++G ILADEMGLGKT+Q I++L L+++ + GP +++ P
Sbjct: 139 LREYQIQGLNWLISLYENRLSG-ILADEMGLGKTLQTISFLGYLRYIKHIDGPFIVIVPK 197
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGL-PPPFNVLLVCYSLFERH 286
S L+NW RE KW P +V+ G + +S+ K L F+VL+ + + R
Sbjct: 198 STLDNWRREFAKWTPDVNVVVLQGD-----KEQRASIIKDQLYTAKFDVLITSFEMILR- 251
Query: 287 SVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNL-MSVARNANQRLMLTGTPLQND 345
++ L+++RW +++DEAH +K+++S K + + +RN RL++TGTPLQN+
Sbjct: 252 ------EKSALQKFRWEYIVVDEAHRIKNEDSSLSKIIRLFYSRN---RLLITGTPLQNN 302
Query: 346 LHELWSLLEFMMPDLFA-------------TEDVDLKKLLNGEDRDLIGRMKSILGPFIL 392
LHELW+LL F++PD+F +E++D ++ +D+ + + +L PF+L
Sbjct: 303 LHELWALLNFLLPDVFGDSDQFDEAFDNQNSEELDEEEKQRRQDK-AVSELHQLLSPFLL 361
Query: 393 RRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGV 452
RR+K+DV + L+PKI+ Y+ M Q +E Y+ +L + D+ + GV
Sbjct: 362 RRVKADVEKSLLPKIETNVYIGMTDMQ-------VEWYK--------RLLEKDIDAVNGV 406
Query: 453 LPQRQ----ISNYFVQFRKIANHPLL 474
+ +R+ + N +Q RK NHP L
Sbjct: 407 VGKREGKTRLLNIVMQLRKCCNHPYL 432
>ASPGD|ASPL0000047400 [details] [associations]
symbol:AN2285 species:162425 "Emericella nidulans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0042766 "nucleosome
mobilization" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0043486 "histone exchange" evidence=IEA] [GO:0006348 "chromatin
silencing at telomere" evidence=IEA] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0016584
"nucleosome positioning" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043618 "regulation of transcription from RNA
polymerase II promoter in response to stress" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 EMBL:BN001307 GO:GO:0006281
GO:GO:0006351 GO:GO:0016568 GO:GO:0004386 EMBL:AACD01000038
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K11665 RefSeq:XP_659889.1 ProteinModelPortal:Q5BAZ5
STRING:Q5BAZ5 EnsemblFungi:CADANIAT00008977 GeneID:2874790
KEGG:ani:AN2285.2 HOGENOM:HOG000048482 OMA:LYFQMTR
OrthoDB:EOG41G6C8 Uniprot:Q5BAZ5
Length = 1612
Score = 455 (165.2 bits), Expect = 1.3e-41, P = 1.3e-41
Identities = 125/373 (33%), Positives = 191/373 (51%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
LK YQL G+N+L+ LY +GI G ILADEMGLGKTIQ+I+ + L ++N GP L++ PA
Sbjct: 798 LKEYQLKGLNWLVNLYEQGING-ILADEMGLGKTIQSISVMAYLAEVHNIWGPFLVIAPA 856
Query: 228 SVLENWERELKKWCPSFSVLQYHGAG------RTAYSRELSSLAKAGLPPPFNVLLVCYS 281
S L NW++E+ K+ P+ VL Y G R + R+ + K F+VL+ Y
Sbjct: 857 STLHNWQQEITKFVPNIKVLPYWGNAKDRKILRKFWDRKHITYTKES---EFHVLVTSYQ 913
Query: 282 LFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTP 341
L D + ++ +W +++DEA A+K S RWK+L+ + RL+LTGTP
Sbjct: 914 LVVL-------DAQYFQKVKWQYMILDEAQAIKSSQSSRWKSLLGF--HCRNRLLLTGTP 964
Query: 342 LQNDLHELWSLLEFMMPDLFATEDV-------DLKKLLNGEDR---DLIGRMKSILGPFI 391
+QN++ ELW+LL F+MP LF + D D++ + D + R+ IL PF+
Sbjct: 965 IQNNMQELWALLHFIMPTLFDSHDEFSEWFSKDIESHAQSNTKLNEDQLRRLHMILKPFM 1024
Query: 392 LRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVG 451
LRR+K V Q+L K++ + + Q Y R R++ + + A +
Sbjct: 1025 LRRVKKHVQQELGDKVEKDVFCDLTYRQRALYTNL--------RNRVSIMDLIEKAAVGD 1076
Query: 452 VLPQRQISNYFVQFRKIANHPLLVRRIYSDD--DVVRFAK--------KLHPMGAFGFEC 501
+ N +QFRK+ NHP L R + + FA+ + GAF F
Sbjct: 1077 ETDSTTLMNLVMQFRKVCNHPDLFERAETKSPFSLAHFAETASFNIKQSIEDDGAFSFLR 1136
Query: 502 TLERVIEELKNYS 514
++ + E NYS
Sbjct: 1137 FVDTSVGEAFNYS 1149
>FB|FBgn0020306 [details] [associations]
symbol:dom "domino" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=IEA;NAS] [GO:0008283 "cell
proliferation" evidence=NAS] [GO:0016458 "gene silencing"
evidence=IGI] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] [GO:0002165 "instar larval or pupal development"
evidence=IMP] [GO:0006325 "chromatin organization" evidence=IMP]
[GO:0048477 "oogenesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0035207 "negative regulation of hemocyte
proliferation" evidence=TAS] [GO:0030097 "hemopoiesis"
evidence=TAS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000381 "regulation of alternative
mRNA splicing, via spliceosome" evidence=IMP] [GO:0000123 "histone
acetyltransferase complex" evidence=IPI] [GO:0045747 "positive
regulation of Notch signaling pathway" evidence=IGI] [GO:0035222
"wing disc pattern formation" evidence=IGI] [GO:0010629 "negative
regulation of gene expression" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0070983 "dendrite guidance"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP] [GO:2000637
"positive regulation of gene silencing by miRNA" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 EMBL:AE013599 GO:GO:0005524
GO:GO:0006355 GO:GO:0003677 GO:GO:0035222 GO:GO:0048477
GO:GO:0016573 GO:GO:0045747 GO:GO:0006351 GO:GO:0007049
GO:GO:0035267 GO:GO:0004386 GO:GO:0030097 GO:GO:0043486
GO:GO:2000637 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016458 InterPro:IPR017877
PROSITE:PS50090 GO:GO:0070983 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0008094 GO:GO:0000381 EMBL:AF076776 EMBL:AF254373
EMBL:AY058653 RefSeq:NP_524833.2 RefSeq:NP_788424.1 UniGene:Dm.7802
ProteinModelPortal:Q9NDJ2 SMR:Q9NDJ2 IntAct:Q9NDJ2 STRING:Q9NDJ2
PaxDb:Q9NDJ2 EnsemblMetazoa:FBtr0071603 GeneID:45655
KEGG:dme:Dmel_CG9696 UCSC:CG9696-RA CTD:45655 FlyBase:FBgn0020306
GeneTree:ENSGT00530000063427 InParanoid:Q9NDJ2 KO:K11320
OMA:TENDASA OrthoDB:EOG4C5B08 PhylomeDB:Q9NDJ2 GenomeRNAi:45655
NextBio:838265 Bgee:Q9NDJ2 GO:GO:0002165 GO:GO:0035207
Uniprot:Q9NDJ2
Length = 3198
Score = 455 (165.2 bits), Expect = 3.5e-41, P = 3.5e-41
Identities = 114/307 (37%), Positives = 180/307 (58%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQ +G+++L+ + + + G ILADEMGLGKTIQ I L L + GPHLIV P+
Sbjct: 914 LREYQHIGLDWLVTMNERKLNG-ILADEMGLGKTIQTIALLAHLACAKGNWGPHLIVVPS 972
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
SV+ NWE E KKWCP F +L Y+G+ + R+L + P F+V + Y L
Sbjct: 973 SVMLNWEMEFKKWCPGFKILTYYGSQK---ERKLKRVGWTK-PNAFHVCITSYKLV---- 1024
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
VQ D++ +R +W +++DEA +K+ S RW+ L++ + +RL+LTGTPLQNDL
Sbjct: 1025 VQ---DQQSFRRKKWKYLILDEAQNIKNFKSQRWQLLLNFS--TERRLLLTGTPLQNDLM 1079
Query: 348 ELWSLLEFMMPDLFATEDVDLKK--------LLNGE---DRDLIGRMKSILGPFILRRLK 396
ELWSL+ F+MP +F++ + K+ ++ G + LI R+ ++ PF+LRRLK
Sbjct: 1080 ELWSLMHFLMPYVFSSHR-EFKEWFSNPMTGMIEGNMEYNETLITRLHKVIRPFLLRRLK 1138
Query: 397 SDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAK-LSDADLATIVGVLPQ 455
+V +Q+ K + V + Q Y E++ +SRA+ + L +L +++ VL Q
Sbjct: 1139 KEVEKQMPKKYEHVITCRLSNRQRYLY----EDF--MSRAKTRETLQTGNLLSVINVLMQ 1192
Query: 456 -RQISNY 461
R++ N+
Sbjct: 1193 LRKVCNH 1199
Score = 253 (94.1 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 75/231 (32%), Positives = 126/231 (54%)
Query: 255 TAY-SRELSSLAKAGLPPPFNVLLVCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHAL 313
T Y S++ L + G P N VC + ++ V Q D++ +R +W +++DEA +
Sbjct: 993 TYYGSQKERKLKRVGWTKP-NAFHVCITSYKL--VVQ--DQQSFRRKKWKYLILDEAQNI 1047
Query: 314 KDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSLLEFMMPDLFATEDVDLKK--- 370
K+ S RW+ L++ + +RL+LTGTPLQNDL ELWSL+ F+MP +F++ + K+
Sbjct: 1048 KNFKSQRWQLLLNFS--TERRLLLTGTPLQNDLMELWSLMHFLMPYVFSSHR-EFKEWFS 1104
Query: 371 -----LLNGE---DRDLIGRMKSILGPFILRRLKSDVMQQLVPKIQWVEYVTMERPQEDA 422
++ G + LI R+ ++ PF+LRRLK +V +Q+ K + V + Q
Sbjct: 1105 NPMTGMIEGNMEYNETLITRLHKVIRPFLLRRLKKEVEKQMPKKYEHVITCRLSNRQRYL 1164
Query: 423 YRVAIEEYRAVSRARIAK-LSDADLATIVGVLPQRQISNYFVQFRKIANHP 472
Y E++ +SRA+ + L +L +++ VL +Q RK+ NHP
Sbjct: 1165 Y----EDF--MSRAKTRETLQTGNLLSVINVL---------MQLRKVCNHP 1200
>ASPGD|ASPL0000037473 [details] [associations]
symbol:AN2973 species:162425 "Emericella nidulans"
[GO:0000729 "DNA double-strand break processing" evidence=IEA]
[GO:0070870 "heterochromatin maintenance involved in chromatin
silencing" evidence=IEA] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0000183 "chromatin
silencing at rDNA" evidence=IEA] [GO:0070869 "heterochromatin
assembly involved in chromatin silencing" evidence=IEA] [GO:0006348
"chromatin silencing at telomere" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0031934 "mating-type region heterochromatin" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000775 "chromosome,
centromeric region" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 EMBL:BN001306 EMBL:AACD01000051
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 OrthoDB:EOG4BCHW4 KO:K14439 HOGENOM:HOG000195581
RefSeq:XP_660577.1 ProteinModelPortal:Q5B907
EnsemblFungi:CADANIAT00010107 GeneID:2874181 KEGG:ani:AN2973.2
OMA:QQVGINW Uniprot:Q5B907
Length = 1107
Score = 444 (161.4 bits), Expect = 1.0e-40, P = 1.0e-40
Identities = 125/365 (34%), Positives = 193/365 (52%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
+K YQ+VG+N+L LL+ ++ ILAD+MGLGKT Q I +L L + GPHL+V P+
Sbjct: 564 MKNYQIVGINWLSLLFENELS-CILADDMGLGKTCQVIAFLAHL-YEKGIKGPHLVVVPS 621
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
S +ENW RE +K+CP+ SV+ Y+ A + ++ + G NV++ Y++
Sbjct: 622 STIENWLREFQKFCPTLSVMPYY-ADQNVRAQIREQIE--GNRDDINVVITTYTI----- 673
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
+ K D L+ + + DE H LK S ++ L+ + A RL+LTGTPLQN+L
Sbjct: 674 AKGKVDAHFLRNMDFCACVYDEGHMLKSSTSVLYEKLIRI--RARFRLLLTGTPLQNNLQ 731
Query: 348 ELWSLLEFMMPDLFATEDVDLKKLLNGEDRDL------------IGRMKSILGPFILRRL 395
EL SLL F++P +F DL+ + + + + + I R KS+L PF+LRR
Sbjct: 732 ELASLLGFILPKVFQERKDDLQYIFSNKAKTVDESHSALLSAQRIERAKSMLKPFVLRRK 791
Query: 396 KSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQ 455
K V+ L KI VEY M Q + Y E+ + + KL + D A G
Sbjct: 792 KHQVID-LPAKISRVEYCEMNAAQREIY-----EHE---KNEVKKLLE-DRAA--GKKTG 839
Query: 456 RQISNYFVQFRKIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFECTLERVIEELKNYSD 515
+ +N ++ R+ A HPLL RR Y+D + + +K + E + + E+L+ Y+D
Sbjct: 840 NKSANILMKLRQAAIHPLLHRRHYNDKILTKMSKACLQEEKWA-ESDPKLIYEDLQPYND 898
Query: 516 FSIHQ 520
F HQ
Sbjct: 899 FECHQ 903
>SGD|S000002742 [details] [associations]
symbol:SWR1 "Swi2/Snf2-related ATPase structural component of
the SWR1 complex" species:4932 "Saccharomyces cerevisiae"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000812 "Swr1 complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IGI;IMP;IDA] [GO:0005198 "structural molecule
activity" evidence=IMP] [GO:0043486 "histone exchange"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SGD:S000002742 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
GO:GO:0005198 EMBL:BK006938 GO:GO:0006351 GO:GO:0000812
GO:GO:0004386 GO:GO:0043486 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427
EMBL:U51032 KO:K11681 HOGENOM:HOG000186095 OrthoDB:EOG49S9FK
PIR:S70099 RefSeq:NP_010621.1 ProteinModelPortal:Q05471 SMR:Q05471
DIP:DIP-2845N IntAct:Q05471 MINT:MINT-1165514 STRING:Q05471
PaxDb:Q05471 EnsemblFungi:YDR334W GeneID:851934 KEGG:sce:YDR334W
CYGD:YDR334w OMA:APGFKVL NextBio:970001 Genevestigator:Q05471
GermOnline:YDR334W Uniprot:Q05471
Length = 1514
Score = 444 (161.4 bits), Expect = 1.8e-40, P = 1.8e-40
Identities = 131/353 (37%), Positives = 190/353 (53%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQ G+N+L LY G ILADEMGLGKTIQ I+ L L + GPHLIV P
Sbjct: 696 LRTYQKQGLNWLASLYNNHTNG-ILADEMGLGKTIQTISLLAYLACEKENWGPHLIVVPT 754
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
SVL NWE E K++ P F VL Y+G+ + + K P F+V +V Y L
Sbjct: 755 SVLLNWEMEFKRFAPGFKVLTYYGSPQQRKEKR-KGWNK---PDAFHVCIVSYQLV---- 806
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
VQ D+ KR RW +++DEAH +K+ S RW+ L++ N +RL+LTGTPLQN+L
Sbjct: 807 VQ---DQHSFKRKRWQYMVLDEAHNIKNFRSTRWQALLNF--NTQRRLLLTGTPLQNNLA 861
Query: 348 ELWSLLEFMMPDL---------FATEDV-------DLKKLLN-----GEDRDL---IGRM 383
ELWSLL F+MP FA D + K++ G+D++ + ++
Sbjct: 862 ELWSLLYFLMPQTVIDGKKVSGFADLDAFQQWFGRPVDKIIETGQNFGQDKETKKTVAKL 921
Query: 384 KSILGPFILRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARI-AKLS 442
+L P++LRRLK+DV +Q+ K + + Y + + Q Y +++ +SRA+ A L+
Sbjct: 922 HQVLRPYLLRRLKADVEKQMPAKYEHIVYCKLSKRQRFLY----DDF--MSRAQTKATLA 975
Query: 443 DADLATIVGVLPQ-RQISNY--FVQFRKIANHPLLVRRIYSD-DDVVRFAKKL 491
+ +IV L Q R++ N+ + R I +L + SD DV R KL
Sbjct: 976 SGNFMSIVNCLMQLRKVCNHPNLFEVRPILTSFVLEHCVASDYKDVERTLLKL 1028
>FB|FBgn0086613 [details] [associations]
symbol:Ino80 "Ino80" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0031011 "Ino80 complex" evidence=IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0000975 "regulatory region DNA
binding" evidence=IDA] [GO:0010468 "regulation of gene expression"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 EMBL:AE014297 GO:GO:0005524
GO:GO:0006355 GO:GO:0006281 GO:GO:0006351 GO:GO:0016887
GO:GO:0006338 GO:GO:0031011 GO:GO:0006310 GO:GO:0005700
GO:GO:0010468 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0003678 GO:GO:0000975 KO:K11665
EMBL:AY069786 RefSeq:NP_732413.1 UniGene:Dm.33518
ProteinModelPortal:Q9VDY1 SMR:Q9VDY1 IntAct:Q9VDY1 STRING:Q9VDY1
PaxDb:Q9VDY1 EnsemblMetazoa:FBtr0083771 GeneID:42314
KEGG:dme:Dmel_CG31212 UCSC:CG31212-RA CTD:54617 FlyBase:FBgn0086613
GeneTree:ENSGT00680000100052 InParanoid:Q9VDY1 OMA:NTMAEVR
OrthoDB:EOG4SQVBH PhylomeDB:Q9VDY1 ChiTaRS:INO80 GenomeRNAi:42314
NextBio:828189 Bgee:Q9VDY1 Uniprot:Q9VDY1
Length = 1638
Score = 443 (161.0 bits), Expect = 2.6e-40, P = 2.6e-40
Identities = 124/370 (33%), Positives = 185/370 (50%)
Query: 164 FQPVLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLI 223
F+ LK YQ+ G+ +L +Y +GI+G ILADEMGLGKT+Q+I +L + GP L+
Sbjct: 531 FKGTLKGYQIKGMTWLANIYDQGISG-ILADEMGLGKTVQSIAFLCHIAEHYGVWGPFLV 589
Query: 224 VCPASVLENWERELKKWCPSFSVLQYHG--AGRTAYSRELSSLAKAGLPPPFNVLLVCYS 281
+ PAS L NW++E+ ++ P F V+ Y G A R + F+V++ Y
Sbjct: 590 ISPASTLHNWQQEMSRFVPDFKVVPYWGSPAERKILRQFWDQKHLHTRDASFHVVITSYQ 649
Query: 282 LFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTP 341
L D K R +W +++DEA A+K S RWK L+ + RL+L+GTP
Sbjct: 650 LVV-------SDYKYFNRIKWQYMVLDEAQAIKSAASQRWKLLLGFS--CRNRLLLSGTP 700
Query: 342 LQNDLHELWSLLEFMMPDLFATEDV-------DLKKLLN---GEDRDLIGRMKSILGPFI 391
+QN + ELW+LL F+MP LF + D D++ G D I R+ IL PF+
Sbjct: 701 IQNSMAELWALLHFIMPTLFDSHDEFNEWFSKDIESHAENKTGIDEKQISRLHMILKPFM 760
Query: 392 LRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVG 451
LRR+K DV +L KI+ + Y + Q+ YR ++ R + S T
Sbjct: 761 LRRIKKDVENELSDKIEIMVYCPLTIRQKLLYRALKQKIRIEDLLHLTSGS----TTTSS 816
Query: 452 VLPQRQISNYFVQFRKIANHP-LLVRRIYSDDDVVRFAKKLHPMGAFGFECTLERVIEEL 510
+ N +QFRK+ NHP L RR +R A+ P E + R++
Sbjct: 817 SSSASNLMNLVMQFRKVCNHPELFERRDARSPFFMRCAEYTIPR-LIHEEGLIHRMLPSR 875
Query: 511 KN--YSDFSI 518
K+ Y+ F+I
Sbjct: 876 KHLLYNRFNI 885
>POMBASE|SPAC29B12.01 [details] [associations]
symbol:ino80 "SNF2 family helicase Ino80" species:4896
"Schizosaccharomyces pombe" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=ISO] [GO:0006338 "chromatin remodeling" evidence=IPI]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IDA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 PomBase:SPAC29B12.01 GO:GO:0005524
EMBL:CU329670 GO:GO:0006355 GenomeReviews:CU329670_GR GO:GO:0003677
GO:GO:0006281 GO:GO:0006351 GO:GO:0016568 GO:GO:0031011 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043140 KO:K11665 HOGENOM:HOG000048482 OrthoDB:EOG41G6C8
RefSeq:NP_001018299.1 ProteinModelPortal:O14148 STRING:O14148
EnsemblFungi:SPAC29B12.01.1 GeneID:3361566 KEGG:spo:SPAC29B12.01
OMA:INDHNSA NextBio:20811604 Uniprot:O14148
Length = 1604
Score = 441 (160.3 bits), Expect = 4.1e-40, P = 4.1e-40
Identities = 116/323 (35%), Positives = 177/323 (54%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
LK YQL G+N+L LY +GI G ILADEMGLGKT+Q+I+ + L +N GP L++ PA
Sbjct: 842 LKEYQLKGLNWLANLYEQGING-ILADEMGLGKTVQSISVMAYLAETHNIWGPFLVIAPA 900
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTA-YSRELSSLAKAGLPP--PFNVLLVCYSLFE 284
S L NW++E+ ++ P + Y G+ + R+ PF+V++ Y L
Sbjct: 901 STLHNWQQEITRFVPKLKCIPYWGSTKDRKILRKFWCRKNMTYDENSPFHVVVTSYQLVV 960
Query: 285 RHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQN 344
D + + +W +++DEA A+K +S RWK+L+ A RL+LTGTP+QN
Sbjct: 961 L-------DAQYFQSVKWQYMILDEAQAIKSSSSSRWKSLL--AFKCRNRLLLTGTPIQN 1011
Query: 345 DLHELWSLLEFMMPDLFAT---------EDVDLKKLLNGE-DRDLIGRMKSILGPFILRR 394
+ ELW+LL F+MP LF + +D++ N + + + R+ IL PF+LRR
Sbjct: 1012 TMQELWALLHFIMPSLFDSHNEFSEWFSKDIESHAQSNTQLNEQQLKRLHMILKPFMLRR 1071
Query: 395 LKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLP 454
+K +V +L KI+ Y + + Q+ Y+ A+ R +S IA+L + A + G
Sbjct: 1072 VKKNVQSELGEKIEKEVYCDLTQRQKILYQ-ALR--RQIS---IAELLEK--AILGGDDT 1123
Query: 455 QRQISNYFVQFRKIANHPLLVRR 477
I N +QFRK+ NHP L R
Sbjct: 1124 VASIMNLVMQFRKVCNHPDLFER 1146
>ASPGD|ASPL0000041040 [details] [associations]
symbol:AN9077 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0000812 "Swr1
complex" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 EMBL:BN001306 GO:GO:0006351
GO:GO:0016568 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GO:GO:0008026 EMBL:AACD01000169 KO:K11681
RefSeq:XP_682346.1 STRING:Q5ARK3 GeneID:2868023 KEGG:ani:AN9077.2
HOGENOM:HOG000186095 OMA:YGNQEER OrthoDB:EOG49S9FK Uniprot:Q5ARK3
Length = 1698
Score = 428 (155.7 bits), Expect = 9.0e-40, Sum P(2) = 9.0e-40
Identities = 120/328 (36%), Positives = 176/328 (53%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQ G+++L LY I G ILADEMGLGKTIQ I L L + GPHL+V P
Sbjct: 825 LREYQHFGLDWLAGLYSNHING-ILADEMGLGKTIQTIALLAHLAVEHGVWGPHLVVVPT 883
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
SV+ NWE E KKWCP F ++ Y+G + + +NVL+ Y L
Sbjct: 884 SVILNWEMEFKKWCPGFKIMTYYGNQEERRQKRRGWMDDNS----WNVLITSYQL----- 934
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
V Q D+++LKR W +++DEAH +K+ S RW+ L++ A RL+LTGTPLQN+L
Sbjct: 935 VLQ--DQQVLKRRSWHYMILDEAHNIKNFRSQRWQALLTFRTRA--RLLLTGTPLQNNLT 990
Query: 348 ELWSLLEFMMP---DLFATED-VDLKKL------------------LNGEDRDLIGRMKS 385
ELWSLL F+MP D E DL+ ++ E + ++ ++ +
Sbjct: 991 ELWSLLFFLMPTDGDEAGIEGFADLRNFSEWFRRPVEQILEHGRETMDDEAKQVVTKLHT 1050
Query: 386 ILGPFILRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAK-LSDA 444
+L P+ILRRLK+DV +Q+ K + V Y + + Q Y + + +SRA+ + L+
Sbjct: 1051 VLRPYILRRLKADVEKQMPGKYEHVVYCRLSKRQRYLY----DGF--MSRAQTKETLASG 1104
Query: 445 DLATIVGVLPQRQISNYFVQFRKIANHP 472
+ +I+ N +Q RK+ NHP
Sbjct: 1105 NYLSII---------NCLMQLRKVCNHP 1123
Score = 41 (19.5 bits), Expect = 9.0e-40, Sum P(2) = 9.0e-40
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 151 SDIDDACGDEDSD 163
+D+DD GD D D
Sbjct: 586 TDMDDDMGDSDDD 598
>DICTYBASE|DDB_G0271052 [details] [associations]
symbol:snf2b "SNF2-related protein Snf2a"
species:44689 "Dictyostelium discoideum" [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00951 dictyBase:DDB_G0271052 GO:GO:0005524 GO:GO:0005654
EMBL:AAFI02000005 GO:GO:0003677 GO:GO:0006357 GO:GO:0004386
InterPro:IPR011050 SUPFAM:SSF51126 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF47370
KO:K11647 InterPro:IPR014012 PROSITE:PS51204 RefSeq:XP_646649.1
ProteinModelPortal:Q55C32 EnsemblProtists:DDB0220695 GeneID:8617621
KEGG:ddi:DDB_G0271052 InParanoid:Q55C32 OMA:NINDNPN Uniprot:Q55C32
Length = 3247
Score = 432 (157.1 bits), Expect = 1.5e-39, Sum P(2) = 1.5e-39
Identities = 116/338 (34%), Positives = 180/338 (53%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
LKPYQ+ G+ +++ LY + G ILADEMGLGKTIQ I + L + + GP L+V P
Sbjct: 1711 LKPYQMQGLQWMVSLYNNKLNG-ILADEMGLGKTIQTIALVSYLIEVKKNNGPFLVVVPL 1769
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
S L NW +E KW P + Y+G S+ +A P FN ++ Y +
Sbjct: 1770 STLSNWGQEFSKWAPKVKRVLYYGDKPARKSKFEEFIA----PGQFNAVVTTYEYIIK-- 1823
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
D+ L + +W+ +++DE H +K+ S + ++ + ++ RL+LTGTPLQN L
Sbjct: 1824 -----DKNALSKIKWNYLIVDEGHRMKNYTS-KLSIILGTSYSSRYRLLLTGTPLQNSLP 1877
Query: 348 ELWSLLEFMMPDLF-ATEDVDL----------KKL-LNGEDRDLI-GRMKSILGPFILRR 394
ELW+LL F++P +F ED + +K+ +N E++ LI R+ +L PF+LRR
Sbjct: 1878 ELWALLNFLLPTIFDCVEDFEQWFNAPFAQTGEKIEMNEEEQLLIIQRLHKVLRPFLLRR 1937
Query: 395 LKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLP 454
LK +V QL K++ V M Q Y + + + VS+ + +D + G
Sbjct: 1938 LKKEVEAQLPDKVEKVLKCDMSAFQAKMYDLI--KTKGVSKLASSGGADGNPKLAKG--- 1992
Query: 455 QRQISNYFVQFRKIANHP-LLVRRIYS-DDDVVRFAKK 490
+ N +VQ RKI NHP L Y+ DD+++R+A K
Sbjct: 1993 ---LKNTYVQLRKICNHPYLFYDDEYNIDDNLIRYAGK 2027
Score = 42 (19.8 bits), Expect = 1.5e-39, Sum P(2) = 1.5e-39
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 466 RKIANHPLLVRRIYSDDD 483
RK AN+ ++ + DDD
Sbjct: 2313 RKTANNNAMISEFFDDDD 2330
>WB|WBGene00004204 [details] [associations]
symbol:swsn-4 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0040010 GO:GO:0006355
GO:GO:0003677 GO:GO:0040035 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647
GeneTree:ENSGT00550000074659 OMA:QKKYTIS InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 EMBL:Z68751 EMBL:Z68341 EMBL:AF230280 PIR:T20488
RefSeq:NP_502082.1 UniGene:Cel.23435 ProteinModelPortal:G5EF53
SMR:G5EF53 EnsemblMetazoa:F01G4.1 GeneID:178015
KEGG:cel:CELE_F01G4.1 CTD:178015 WormBase:F01G4.1 NextBio:899366
Uniprot:G5EF53
Length = 1474
Score = 435 (158.2 bits), Expect = 1.6e-39, P = 1.6e-39
Identities = 131/366 (35%), Positives = 188/366 (51%)
Query: 129 TTSAACDRYAEVEASSVRIVTQSDIDDACGDEDSDFQPVLKPYQLVGVNFLLLLYRKGIA 188
T D YA ++V Q G D + +LKPYQ+ G+ +++ LY +
Sbjct: 499 TKKQMADYYATAHKIKEKVVKQHT---TMGGGDPNL--LLKPYQIKGLEWMVSLYNNNLN 553
Query: 189 GAILADEMGLGKTIQAI---TYLMLLKHLNNDPGPHLIVCPASVLENWERELKKWCPSFS 245
G ILADEMGLGKTIQ I TYLM +K NN GP+L++ P S L NW+ E KW PS +
Sbjct: 554 G-ILADEMGLGKTIQTISLVTYLMEVKQ-NN--GPYLVIVPLSTLSNWQNEFAKWAPSVT 609
Query: 246 VLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHSVQQKDDRKILKRWRWSCV 305
+ Y G + A R + K FNVL+ Y + +++K +L + RW +
Sbjct: 610 TIIYKGT-KDARRRVEGQIRKGA----FNVLMTTYE----YVIKEK---ALLGKIRWKYM 657
Query: 306 LMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSLLEFMMPDLFAT-- 363
++DE H LK+ N + +++ +A RL+LTGTPLQN L ELW+LL F++P +F++
Sbjct: 658 IIDEGHRLKNHNC-KLTLMLNGFFHAQHRLLLTGTPLQNKLPELWALLNFLLPSIFSSCG 716
Query: 364 ----------EDVDLKKLLNGEDRDLI-GRMKSILGPFILRRLKSDVMQQLVPKIQWVEY 412
K LN E+ LI R+ +L PF+LRRLK +V QL K EY
Sbjct: 717 TFEQWFNAPFATTGEKVELNQEETMLIIRRLHKVLRPFLLRRLKKEVESQLPDK---TEY 773
Query: 413 VTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQISNYFVQFRKIANHP 472
V + + A + I YR + + L DA +++ G R + N V RK+ NHP
Sbjct: 774 VI--KCDQSALQKVI--YRHMQKGL---LLDAKMSS--GA---RSLMNTVVHLRKLCNHP 821
Query: 473 LLVRRI 478
L I
Sbjct: 822 FLFPNI 827
>ZFIN|ZDB-GENE-030605-1 [details] [associations]
symbol:smarca4 "SWI/SNF related, matrix associated,
actin dependent regulator of chromatin, subfamily a, member 4"
species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0031101 "fin regeneration" evidence=IMP] [GO:0003407 "neural
retina development" evidence=IMP] [GO:0007417 "central nervous
system development" evidence=IMP] [GO:0014032 "neural crest cell
development" evidence=IMP] [GO:0060059 "embryonic retina
morphogenesis in camera-type eye" evidence=IMP] [GO:0010842 "retina
layer formation" evidence=IMP] [GO:0021634 "optic nerve formation"
evidence=IMP] [GO:0030182 "neuron differentiation" evidence=IMP]
[GO:0060973 "cell migration involved in heart development"
evidence=IMP] [GO:0001947 "heart looping" evidence=IMP] [GO:0060038
"cardiac muscle cell proliferation" evidence=IMP] [GO:0048596
"embryonic camera-type eye morphogenesis" evidence=IMP] [GO:0000185
"activation of MAPKKK activity" evidence=IMP] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 ZFIN:ZDB-GENE-030605-1 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0030182 GO:GO:0003677 GO:GO:0007417
GO:GO:0004386 GO:GO:0001947 GO:GO:0010842 GO:GO:0014032
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0031101 GO:GO:0060038 GO:GO:0048596
KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 GO:GO:0060059 GO:GO:0000185 HOGENOM:HOG000172363
HOVERGEN:HBG056636 CTD:6597 OMA:HKPMESM EMBL:BX322663 EMBL:BC163918
EMBL:BC163920 EMBL:AY205256 EMBL:AY218841 IPI:IPI00493397
RefSeq:NP_853634.1 UniGene:Dr.2414 SMR:Q7ZSY3 STRING:Q7ZSY3
Ensembl:ENSDART00000115110 Ensembl:ENSDART00000134514 GeneID:353295
KEGG:dre:353295 InParanoid:Q7ZSY3 NextBio:20812727 GO:GO:0060973
GO:GO:0021634 Uniprot:Q7ZSY3
Length = 1627
Score = 423 (154.0 bits), Expect = 2.7e-39, Sum P(2) = 2.7e-39
Identities = 119/327 (36%), Positives = 173/327 (52%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAI---TYLMLLKHLNNDPGPHLIV 224
LK YQ+ G+ +L+ LY + G ILADEMGLGKTIQ I TYLM K LN GP LI+
Sbjct: 766 LKQYQIKGLEWLVSLYNNNLNG-ILADEMGLGKTIQTIALITYLMEFKRLN---GPFLII 821
Query: 225 CPASVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFE 284
P S L NW E KW PS + Y G+ A R + ++G FNVL+ Y
Sbjct: 822 VPLSTLSNWVYEFDKWAPSVVKVSYKGS--PAARRAFLPILRSG---KFNVLVTTYEYII 876
Query: 285 RHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQN 344
+ D+++L + RW +++DE H +K+ + + +++ A +R++LTGTPLQN
Sbjct: 877 K-------DKQVLAKLRWKYMIVDEGHRMKNHHC-KLTQVLNTHYLAPRRVLLTGTPLQN 928
Query: 345 DLHELWSLLEFMMPDLFAT-----EDVDLKKLLNGEDRDL--------IGRMKSILGPFI 391
L ELW+LL F++P +F + + + + GE DL I R+ +L PF+
Sbjct: 929 KLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFL 988
Query: 392 LRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVG 451
LRRLK +V QL K+++V M Q RV YR + +A+ L+D G
Sbjct: 989 LRRLKKEVEAQLPEKVEYVIKCDMSALQ----RVL---YRHM-QAKGVLLTDGSEKDKKG 1040
Query: 452 VLPQRQISNYFVQFRKIANHPLLVRRI 478
+ + N +Q RKI NHP + + I
Sbjct: 1041 KGGTKTLMNTIMQLRKICNHPYMFQHI 1067
Score = 41 (19.5 bits), Expect = 2.7e-39, Sum P(2) = 2.7e-39
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 135 DRYAEVEASSVRIVTQSDIDDACGDEDSDFQPVLKPYQ 172
D + E+ + +SD +D+ DE+ D + +P Q
Sbjct: 658 DTWLEMNPG-YEVAPRSDSEDSGSDEEEDDEEEPQPSQ 694
>UNIPROTKB|F1S594 [details] [associations]
symbol:LOC100622433 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
GeneTree:ENSGT00550000074659 EMBL:FP102365
Ensembl:ENSSSCT00000014884 OMA:KSSGHER Uniprot:F1S594
Length = 866
Score = 426 (155.0 bits), Expect = 4.6e-39, P = 4.6e-39
Identities = 125/330 (37%), Positives = 174/330 (52%)
Query: 167 VLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAI---TYLMLLKHLNNDPGPHLI 223
VLK YQ+ G+ +L+ LY + G ILADEMGLGKTIQ I TYLM K +N GP LI
Sbjct: 5 VLKQYQIKGLEWLVSLYNNNLNG-ILADEMGLGKTIQTIALITYLMEHKRIN---GPFLI 60
Query: 224 VCPASVLENWERELKKWCPSFSVLQYHG--AGRTAYSRELSSLAKAGLPPPFNVLLVCYS 281
+ P S L NW E KW PS + Y G A R A+ +L S G FNVLL Y
Sbjct: 61 IVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRS----G---KFNVLLTTYE 113
Query: 282 LFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTP 341
+ D+ IL + RW +++DE H +K+ + + +++ A +RL+LTGTP
Sbjct: 114 YIIK-------DKHILAKIRWKYMIVDEGHRMKNHHC-KLTQVLNTHYVAPRRLLLTGTP 165
Query: 342 LQNDLHELWSLLEFMMPDLFAT-----EDVDLKKLLNGEDRDL--------IGRMKSILG 388
LQN L ELW+LL F++P +F + + + + GE DL I R+ +L
Sbjct: 166 LQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLR 225
Query: 389 PFILRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLAT 448
PF+LRRLK +V QL K+++V M Q RV YR + +A+ L+D
Sbjct: 226 PFLLRRLKKEVEAQLPEKVEYVIKCDMSALQ----RVL---YRHM-QAKGVLLTDGSEKD 277
Query: 449 IVGVLPQRQISNYFVQFRKIANHPLLVRRI 478
G + + N +Q RKI NHP + + I
Sbjct: 278 KKGKGGTKTLMNTIMQLRKICNHPYMFQHI 307
>UNIPROTKB|K7GT64 [details] [associations]
symbol:LOC100622433 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00550000074659 EMBL:FP102365
Ensembl:ENSSSCT00000034320 Uniprot:K7GT64
Length = 980
Score = 426 (155.0 bits), Expect = 6.4e-39, P = 6.4e-39
Identities = 125/330 (37%), Positives = 174/330 (52%)
Query: 167 VLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAI---TYLMLLKHLNNDPGPHLI 223
VLK YQ+ G+ +L+ LY + G ILADEMGLGKTIQ I TYLM K +N GP LI
Sbjct: 86 VLKQYQIKGLEWLVSLYNNNLNG-ILADEMGLGKTIQTIALITYLMEHKRIN---GPFLI 141
Query: 224 VCPASVLENWERELKKWCPSFSVLQYHG--AGRTAYSRELSSLAKAGLPPPFNVLLVCYS 281
+ P S L NW E KW PS + Y G A R A+ +L S G FNVLL Y
Sbjct: 142 IVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRS----G---KFNVLLTTYE 194
Query: 282 LFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTP 341
+ D+ IL + RW +++DE H +K+ + + +++ A +RL+LTGTP
Sbjct: 195 YIIK-------DKHILAKIRWKYMIVDEGHRMKNHHC-KLTQVLNTHYVAPRRLLLTGTP 246
Query: 342 LQNDLHELWSLLEFMMPDLFAT-----EDVDLKKLLNGEDRDL--------IGRMKSILG 388
LQN L ELW+LL F++P +F + + + + GE DL I R+ +L
Sbjct: 247 LQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLR 306
Query: 389 PFILRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLAT 448
PF+LRRLK +V QL K+++V M Q RV YR + +A+ L+D
Sbjct: 307 PFLLRRLKKEVEAQLPEKVEYVIKCDMSALQ----RVL---YRHM-QAKGVLLTDGSEKD 358
Query: 449 IVGVLPQRQISNYFVQFRKIANHPLLVRRI 478
G + + N +Q RKI NHP + + I
Sbjct: 359 KKGKGGTKTLMNTIMQLRKICNHPYMFQHI 388
>ZFIN|ZDB-GENE-030131-5964 [details] [associations]
symbol:smarca2 "SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, subfamily a,
member 2" species:7955 "Danio rerio" [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 ZFIN:ZDB-GENE-030131-5964 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 KO:K11647
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 CTD:6595
HOVERGEN:HBG056636 EMBL:BC060676 IPI:IPI00483012 RefSeq:NP_997881.1
UniGene:Dr.93531 ProteinModelPortal:Q6P9P2 SMR:Q6P9P2 STRING:Q6P9P2
GeneID:334032 KEGG:dre:334032 InParanoid:Q6P9P2 NextBio:20810237
ArrayExpress:Q6P9P2 Uniprot:Q6P9P2
Length = 1568
Score = 428 (155.7 bits), Expect = 9.7e-39, P = 9.7e-39
Identities = 121/338 (35%), Positives = 175/338 (51%)
Query: 159 DEDSDF--QPVLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAI---TYLMLLKH 213
D+ S F LK YQ+ G+ +++ LY + G ILADEMGLGKTIQ I TYLM LK
Sbjct: 715 DKQSTFLINGTLKQYQIQGLEWMVSLYNNNLNG-ILADEMGLGKTIQTIGLITYLMELKR 773
Query: 214 LNNDPGPHLIVCPASVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPF 273
LN GP+LI+ P S L NW EL KW PS + Y G + R L ++G F
Sbjct: 774 LN---GPYLIIVPLSTLSNWVYELDKWAPSIVKIAYKGT--PSMRRSLVPQLRSG---KF 825
Query: 274 NVLLVCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQ 333
NVL+ Y + D+ IL + RW +++DE H +K+ + + +++ A +
Sbjct: 826 NVLITTYEYIIK-------DKHILAKIRWKYMIVDEGHRMKNHHC-KLTQVLNTHYVAPR 877
Query: 334 RLMLTGTPLQNDLHELWSLLEFMMPDLFAT-----EDVDLKKLLNGEDRDL--------I 380
RL+LTGTPLQN L ELW+LL F++P +F + + + + GE DL I
Sbjct: 878 RLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILII 937
Query: 381 GRMKSILGPFILRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAK 440
R+ +L PF+LRRLK +V QL K+++V M Q+ YR + +
Sbjct: 938 RRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSAIQKVLYRHM--------QGKGIL 989
Query: 441 LSDADLATIVGVLPQRQISNYFVQFRKIANHPLLVRRI 478
L+D G + + N +Q +KI NHP + + I
Sbjct: 990 LTDGSEKDKKGKGGAKTLMNTIMQLKKICNHPYMFQHI 1027
>UNIPROTKB|D4AA07 [details] [associations]
symbol:Smarca4 "Transcription activator BRG1" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS51194 SMART:SM00490 SMART:SM00592 RGD:621728
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
OrthoDB:EOG418BMJ IPI:IPI00915110 Ensembl:ENSRNOT00000060926
ArrayExpress:D4AA07 Uniprot:D4AA07
Length = 1262
Score = 426 (155.0 bits), Expect = 1.1e-38, P = 1.1e-38
Identities = 125/330 (37%), Positives = 174/330 (52%)
Query: 167 VLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAI---TYLMLLKHLNNDPGPHLI 223
VLK YQ+ G+ +L+ LY + G ILADEMGLGKTIQ I TYLM K +N GP LI
Sbjct: 552 VLKQYQIKGLEWLVSLYNNNLNG-ILADEMGLGKTIQTIALITYLMEHKRIN---GPFLI 607
Query: 224 VCPASVLENWERELKKWCPSFSVLQYHG--AGRTAYSRELSSLAKAGLPPPFNVLLVCYS 281
+ P S L NW E KW PS + Y G A R A+ +L S G FNVLL Y
Sbjct: 608 IVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRS----G---KFNVLLTTYE 660
Query: 282 LFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTP 341
+ D+ IL + RW +++DE H +K+ + + +++ A +RL+LTGTP
Sbjct: 661 YIIK-------DKHILAKIRWKYMIVDEGHRMKNHHC-KLTQVLNTHYVAPRRLLLTGTP 712
Query: 342 LQNDLHELWSLLEFMMPDLFAT-----EDVDLKKLLNGEDRDL--------IGRMKSILG 388
LQN L ELW+LL F++P +F + + + + GE DL I R+ +L
Sbjct: 713 LQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLR 772
Query: 389 PFILRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLAT 448
PF+LRRLK +V QL K+++V M Q RV YR + +A+ L+D
Sbjct: 773 PFLLRRLKKEVEAQLPEKVEYVIKCDMSALQ----RVL---YRHM-QAKGVLLTDGSEKD 824
Query: 449 IVGVLPQRQISNYFVQFRKIANHPLLVRRI 478
G + + N +Q RKI NHP + + I
Sbjct: 825 KKGKGGTKTLMNTIMQLRKICNHPYMFQHI 854
>ASPGD|ASPL0000056677 [details] [associations]
symbol:AN1024 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0006312 "mitotic
recombination" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 EMBL:BN001308 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
HOGENOM:HOG000172362 EnsemblFungi:CADANIAT00001623 OMA:NNITELW
Uniprot:C8VTY9
Length = 868
Score = 422 (153.6 bits), Expect = 1.2e-38, P = 1.2e-38
Identities = 102/273 (37%), Positives = 151/273 (55%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
++ YQL G+ +L L+ G+ G ILADEMGLGKT+QAI+ + K +N GP LI P
Sbjct: 202 MRKYQLEGLEWLKSLWMNGLCG-ILADEMGLGKTVQAISLIAFFKE-HNVSGPFLISAPL 259
Query: 228 SVLENWERELKKWCPSFSVLQYHGAG--RTAYSRELSSLAKAGLPPPFNVLLVCYSLFER 285
S + NW E +W P + YHG R ++ +L + P F V+ Y +
Sbjct: 260 STVSNWVDEFARWTPGIKTVLYHGTRDERAQLRKKFMNL-RDQKSPDFPVVCTSYEIC-- 316
Query: 286 HSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
+DRK L +++W +++DE H LK+ N K L+S N+ RL++TGTPLQN+
Sbjct: 317 -----MNDRKFLAQYQWRYIIVDEGHRLKNMNCRLIKELLSY--NSANRLLITGTPLQNN 369
Query: 346 LHELWSLLEFMMPDLFATED-----VDLKKLL--NGED-------RDLIGRMKSILGPFI 391
+ ELWSLL F++P++F + D +L NG+ R L+ M SIL PF+
Sbjct: 370 ITELWSLLHFLLPEIFNDLNSFQNWFDFSSVLDNNGQTDMIERRKRTLVSTMHSILKPFL 429
Query: 392 LRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYR 424
LRR+K+DV L K +++ Y + Q+D YR
Sbjct: 430 LRRVKTDVESALPKKREYILYAPLTLEQKDLYR 462
>UNIPROTKB|D4A4J2 [details] [associations]
symbol:Smarca2 "Protein Smarca2" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
Pfam:PF08880 PROSITE:PS51194 SMART:SM00490 SMART:SM00592
SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
IPI:IPI00777186 Ensembl:ENSRNOT00000016283 ArrayExpress:D4A4J2
Uniprot:D4A4J2
Length = 1506
Score = 426 (155.0 bits), Expect = 1.5e-38, P = 1.5e-38
Identities = 120/327 (36%), Positives = 170/327 (51%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAI---TYLMLLKHLNNDPGPHLIV 224
LK YQL G+ +++ LY + G ILADEMGLGKTIQ I TYLM K LN GP+LI+
Sbjct: 731 LKHYQLQGLEWMVSLYNNNLNG-ILADEMGLGKTIQTIALITYLMEHKRLN---GPYLII 786
Query: 225 CPASVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFE 284
P S L NW E KW PS + Y G A R L ++G FNVLL Y
Sbjct: 787 VPLSTLSNWTYEFDKWAPSVVKISYKGT--PAMRRSLVPQLRSG---KFNVLLTTYEYII 841
Query: 285 RHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQN 344
+ D+ IL + RW +++DE H +K+ + + +++ A +R++LTGTPLQN
Sbjct: 842 K-------DKHILAKIRWKYMIVDEGHRMKNHHC-KLTQVLNTHYVAPRRILLTGTPLQN 893
Query: 345 DLHELWSLLEFMMPDLFAT-----EDVDLKKLLNGEDRDL--------IGRMKSILGPFI 391
L ELW+LL F++P +F + + + + GE DL I R+ +L PF+
Sbjct: 894 KLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFL 953
Query: 392 LRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVG 451
LRRLK +V QL K+++V M Q+ YR +A+ L+D G
Sbjct: 954 LRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHM--------QAKGILLTDGSEKDKKG 1005
Query: 452 VLPQRQISNYFVQFRKIANHPLLVRRI 478
+ + N +Q RKI NHP + + I
Sbjct: 1006 KGGAKTLMNTIMQLRKICNHPYMFQHI 1032
>UNIPROTKB|E1C2F7 [details] [associations]
symbol:E1C2F7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0008285
"negative regulation of cell proliferation" evidence=IEA]
[GO:0016514 "SWI/SNF complex" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0035887 "aortic smooth
muscle cell differentiation" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0045111 "intermediate filament cytoskeleton" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565
"nBAF complex" evidence=IEA] [GO:0071778 "WINAC complex"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0045892 GO:GO:0008285 GO:GO:0030308 GO:GO:0045944
GO:GO:0044212 GO:GO:0045111 GO:GO:0000790 GO:GO:0071564
GO:GO:0016514 GO:GO:0071565 GO:GO:0004386 GO:GO:0001105
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
OMA:PQEGMHQ EMBL:AADN02068434 EMBL:AADN02068435 EMBL:AADN02068436
EMBL:AADN02068437 EMBL:AADN02068438 EMBL:AADN02068439
EMBL:AADN02068440 EMBL:AADN02068441 IPI:IPI00583413
Ensembl:ENSGALT00000016528 Uniprot:E1C2F7
Length = 1546
Score = 426 (155.0 bits), Expect = 1.5e-38, P = 1.5e-38
Identities = 120/327 (36%), Positives = 170/327 (51%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAI---TYLMLLKHLNNDPGPHLIV 224
LK YQL G+ +++ LY + G ILADEMGLGKTIQ I TYLM K LN GP+LI+
Sbjct: 698 LKHYQLQGLEWMVSLYNNNLNG-ILADEMGLGKTIQTIALITYLMEHKRLN---GPYLII 753
Query: 225 CPASVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFE 284
P S L NW E KW PS + Y G A R L ++G FNVLL Y
Sbjct: 754 VPLSTLSNWTYEFDKWAPSVVKISYKGT--PAMRRSLVPQLRSG---KFNVLLTTYEYII 808
Query: 285 RHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQN 344
+ D+ IL + RW +++DE H +K+ + + +++ A +R++LTGTPLQN
Sbjct: 809 K-------DKHILAKIRWKYMIVDEGHRMKNHHC-KLTQVLNTHYVAPRRILLTGTPLQN 860
Query: 345 DLHELWSLLEFMMPDLFAT-----EDVDLKKLLNGEDRDL--------IGRMKSILGPFI 391
L ELW+LL F++P +F + + + + GE DL I R+ +L PF+
Sbjct: 861 KLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFL 920
Query: 392 LRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVG 451
LRRLK +V QL K+++V M Q+ YR +A+ L+D G
Sbjct: 921 LRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHM--------QAKGILLTDGSEKDKKG 972
Query: 452 VLPQRQISNYFVQFRKIANHPLLVRRI 478
+ + N +Q RKI NHP + + I
Sbjct: 973 KGGAKTLMNTIMQLRKICNHPYMFQHI 999
>UNIPROTKB|A5PKK5 [details] [associations]
symbol:SMARCA2 "SMARCA2 protein" species:9913 "Bos taurus"
[GO:0071778 "WINAC complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0045892
GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636
OMA:PQEGMHQ GO:GO:0035887 OrthoDB:EOG418BMJ EMBL:DAAA02022747
EMBL:DAAA02022748 EMBL:DAAA02022749 EMBL:BC142521 IPI:IPI00854472
RefSeq:NP_001092585.1 UniGene:Bt.63204 SMR:A5PKK5 STRING:A5PKK5
Ensembl:ENSBTAT00000035681 GeneID:540904 KEGG:bta:540904
InParanoid:A5PKK5 NextBio:20878906 Uniprot:A5PKK5
Length = 1554
Score = 426 (155.0 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 120/327 (36%), Positives = 170/327 (51%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAI---TYLMLLKHLNNDPGPHLIV 224
LK YQL G+ +++ LY + G ILADEMGLGKTIQ I TYLM K LN GP+LI+
Sbjct: 706 LKHYQLQGLEWMVSLYNNNLNG-ILADEMGLGKTIQTIALITYLMEHKRLN---GPYLII 761
Query: 225 CPASVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFE 284
P S L NW E KW PS + Y G A R L ++G FNVLL Y
Sbjct: 762 VPLSTLSNWTYEFDKWAPSVVKISYKGT--PAMRRSLVPQLRSG---KFNVLLTTYEYII 816
Query: 285 RHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQN 344
+ D+ IL + RW +++DE H +K+ + + +++ A +R++LTGTPLQN
Sbjct: 817 K-------DKHILAKIRWKYMIVDEGHRMKNHHC-KLTQVLNTHYVAPRRILLTGTPLQN 868
Query: 345 DLHELWSLLEFMMPDLFAT-----EDVDLKKLLNGEDRDL--------IGRMKSILGPFI 391
L ELW+LL F++P +F + + + + GE DL I R+ +L PF+
Sbjct: 869 KLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFL 928
Query: 392 LRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVG 451
LRRLK +V QL K+++V M Q+ YR +A+ L+D G
Sbjct: 929 LRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHM--------QAKGILLTDGSEKDKKG 980
Query: 452 VLPQRQISNYFVQFRKIANHPLLVRRI 478
+ + N +Q RKI NHP + + I
Sbjct: 981 KGGAKTLMNTIMQLRKICNHPYMFQHI 1007
>UNIPROTKB|E2RKP4 [details] [associations]
symbol:SMARCA2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0071778 "WINAC complex" evidence=IEA]
[GO:0071565 "nBAF complex" evidence=IEA] [GO:0071564 "npBAF
complex" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0035887 "aortic smooth muscle cell differentiation"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0016514 "SWI/SNF complex" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 GO:GO:0005524 GO:GO:0045892 GO:GO:0008285
GO:GO:0030308 GO:GO:0045944 GO:GO:0044212 GO:GO:0045111
GO:GO:0000790 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0071778 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0035887
EMBL:AAEX03000600 Ensembl:ENSCAFT00000003206 NextBio:20852013
Uniprot:E2RKP4
Length = 1556
Score = 426 (155.0 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 120/327 (36%), Positives = 170/327 (51%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAI---TYLMLLKHLNNDPGPHLIV 224
LK YQL G+ +++ LY + G ILADEMGLGKTIQ I TYLM K LN GP+LI+
Sbjct: 708 LKHYQLQGLEWMVSLYNNNLNG-ILADEMGLGKTIQTIALITYLMEHKRLN---GPYLII 763
Query: 225 CPASVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFE 284
P S L NW E KW PS + Y G A R L ++G FNVLL Y
Sbjct: 764 VPLSTLSNWTYEFDKWAPSVVKISYKGT--PAMRRSLVPQLRSG---KFNVLLTTYEYII 818
Query: 285 RHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQN 344
+ D+ IL + RW +++DE H +K+ + + +++ A +R++LTGTPLQN
Sbjct: 819 K-------DKHILAKIRWKYMIVDEGHRMKNHHC-KLTQVLNTHYVAPRRILLTGTPLQN 870
Query: 345 DLHELWSLLEFMMPDLFAT-----EDVDLKKLLNGEDRDL--------IGRMKSILGPFI 391
L ELW+LL F++P +F + + + + GE DL I R+ +L PF+
Sbjct: 871 KLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFL 930
Query: 392 LRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVG 451
LRRLK +V QL K+++V M Q+ YR +A+ L+D G
Sbjct: 931 LRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHM--------QAKGILLTDGSEKDKKG 982
Query: 452 VLPQRQISNYFVQFRKIANHPLLVRRI 478
+ + N +Q RKI NHP + + I
Sbjct: 983 KGGAKTLMNTIMQLRKICNHPYMFQHI 1009
>UNIPROTKB|F1SJG5 [details] [associations]
symbol:SMARCA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071778 "WINAC complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0045892
GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
GeneTree:ENSGT00550000074659 OMA:PQEGMHQ GO:GO:0035887
EMBL:CT998562 EMBL:CU062411 Ensembl:ENSSSCT00000005766
Uniprot:F1SJG5
Length = 1556
Score = 426 (155.0 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 120/327 (36%), Positives = 170/327 (51%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAI---TYLMLLKHLNNDPGPHLIV 224
LK YQL G+ +++ LY + G ILADEMGLGKTIQ I TYLM K LN GP+LI+
Sbjct: 708 LKHYQLQGLEWMVSLYNNNLNG-ILADEMGLGKTIQTIALITYLMEHKRLN---GPYLII 763
Query: 225 CPASVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFE 284
P S L NW E KW PS + Y G A R L ++G FNVLL Y
Sbjct: 764 VPLSTLSNWTYEFDKWAPSVVKISYKGT--PAMRRSLVPQLRSG---KFNVLLTTYEYII 818
Query: 285 RHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQN 344
+ D+ IL + RW +++DE H +K+ + + +++ A +R++LTGTPLQN
Sbjct: 819 K-------DKHILAKIRWKYMIVDEGHRMKNHHC-KLTQVLNTHYVAPRRILLTGTPLQN 870
Query: 345 DLHELWSLLEFMMPDLFAT-----EDVDLKKLLNGEDRDL--------IGRMKSILGPFI 391
L ELW+LL F++P +F + + + + GE DL I R+ +L PF+
Sbjct: 871 KLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFL 930
Query: 392 LRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVG 451
LRRLK +V QL K+++V M Q+ YR +A+ L+D G
Sbjct: 931 LRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHM--------QAKGILLTDGSEKDKKG 982
Query: 452 VLPQRQISNYFVQFRKIANHPLLVRRI 478
+ + N +Q RKI NHP + + I
Sbjct: 983 KGGAKTLMNTIMQLRKICNHPYMFQHI 1009
>UNIPROTKB|J9P5P2 [details] [associations]
symbol:SMARCA2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
CTD:6595 OMA:PQEGMHQ EMBL:AAEX03000600 RefSeq:XP_850159.1
Ensembl:ENSCAFT00000046362 GeneID:476335 KEGG:cfa:476335
Uniprot:J9P5P2
Length = 1574
Score = 426 (155.0 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 120/327 (36%), Positives = 170/327 (51%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAI---TYLMLLKHLNNDPGPHLIV 224
LK YQL G+ +++ LY + G ILADEMGLGKTIQ I TYLM K LN GP+LI+
Sbjct: 708 LKHYQLQGLEWMVSLYNNNLNG-ILADEMGLGKTIQTIALITYLMEHKRLN---GPYLII 763
Query: 225 CPASVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFE 284
P S L NW E KW PS + Y G A R L ++G FNVLL Y
Sbjct: 764 VPLSTLSNWTYEFDKWAPSVVKISYKGT--PAMRRSLVPQLRSG---KFNVLLTTYEYII 818
Query: 285 RHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQN 344
+ D+ IL + RW +++DE H +K+ + + +++ A +R++LTGTPLQN
Sbjct: 819 K-------DKHILAKIRWKYMIVDEGHRMKNHHC-KLTQVLNTHYVAPRRILLTGTPLQN 870
Query: 345 DLHELWSLLEFMMPDLFAT-----EDVDLKKLLNGEDRDL--------IGRMKSILGPFI 391
L ELW+LL F++P +F + + + + GE DL I R+ +L PF+
Sbjct: 871 KLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFL 930
Query: 392 LRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVG 451
LRRLK +V QL K+++V M Q+ YR +A+ L+D G
Sbjct: 931 LRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHM--------QAKGILLTDGSEKDKKG 982
Query: 452 VLPQRQISNYFVQFRKIANHPLLVRRI 478
+ + N +Q RKI NHP + + I
Sbjct: 983 KGGAKTLMNTIMQLRKICNHPYMFQHI 1009
>MGI|MGI:99603 [details] [associations]
symbol:Smarca2 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=ISO]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006325 "chromatin organization"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] [GO:0016514 "SWI/SNF complex"
evidence=ISO;TAS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0035887 "aortic smooth muscle cell differentiation"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0071564 "npBAF complex"
evidence=IDA] [GO:0071565 "nBAF complex" evidence=IDA] [GO:0071778
"WINAC complex" evidence=ISO] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 MGI:MGI:99603 GO:GO:0005524
GO:GO:0045892 GO:GO:0008285 GO:GO:0007399 GO:GO:0030308
GO:GO:0045944 GO:GO:0044212 GO:GO:0045111 GO:GO:0000790
GO:GO:0071564 GO:GO:0016514 GO:GO:0071565 GO:GO:0004386
GO:GO:0001105 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006334 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778 KO:K11647
ChiTaRS:SMARCA2 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
EMBL:BC075641 IPI:IPI01018407 RefSeq:NP_035546.2 UniGene:Mm.313303
ProteinModelPortal:Q6DIC0 SMR:Q6DIC0 DIP:DIP-48888N STRING:Q6DIC0
PhosphoSite:Q6DIC0 PaxDb:Q6DIC0 PRIDE:Q6DIC0 GeneID:67155
KEGG:mmu:67155 UCSC:uc008hbn.1 InParanoid:Q6DIC0 OrthoDB:EOG418BMJ
NextBio:323746 Bgee:Q6DIC0 Genevestigator:Q6DIC0 Uniprot:Q6DIC0
Length = 1577
Score = 426 (155.0 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 120/327 (36%), Positives = 170/327 (51%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAI---TYLMLLKHLNNDPGPHLIV 224
LK YQL G+ +++ LY + G ILADEMGLGKTIQ I TYLM K LN GP+LI+
Sbjct: 729 LKHYQLQGLEWMVSLYNNNLNG-ILADEMGLGKTIQTIALITYLMEHKRLN---GPYLII 784
Query: 225 CPASVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFE 284
P S L NW E KW PS + Y G A R L ++G FNVLL Y
Sbjct: 785 VPLSTLSNWTYEFDKWAPSVVKISYKGT--PAMRRSLVPQLRSG---KFNVLLTTYEYII 839
Query: 285 RHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQN 344
+ D+ IL + RW +++DE H +K+ + + +++ A +R++LTGTPLQN
Sbjct: 840 K-------DKHILAKIRWKYMIVDEGHRMKNHHC-KLTQVLNTHYVAPRRILLTGTPLQN 891
Query: 345 DLHELWSLLEFMMPDLFAT-----EDVDLKKLLNGEDRDL--------IGRMKSILGPFI 391
L ELW+LL F++P +F + + + + GE DL I R+ +L PF+
Sbjct: 892 KLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFL 951
Query: 392 LRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVG 451
LRRLK +V QL K+++V M Q+ YR +A+ L+D G
Sbjct: 952 LRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHM--------QAKGILLTDGSEKDKKG 1003
Query: 452 VLPQRQISNYFVQFRKIANHPLLVRRI 478
+ + N +Q RKI NHP + + I
Sbjct: 1004 KGGAKTLMNTIMQLRKICNHPYMFQHI 1030
>UNIPROTKB|P51531 [details] [associations]
symbol:SMARCA2 "Probable global transcription activator
SNF2L2" species:9606 "Homo sapiens" [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0035887 "aortic
smooth muscle cell differentiation" evidence=IEA] [GO:0016514
"SWI/SNF complex" evidence=IDA] [GO:0071564 "npBAF complex"
evidence=ISS] [GO:0071565 "nBAF complex" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP;IDA] [GO:0001105 "RNA
polymerase II transcription coactivator activity" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IDA] [GO:0003713
"transcription coactivator activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0071778 "WINAC
complex" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0030308 "negative regulation of cell
growth" evidence=IMP] [GO:0006338 "chromatin remodeling"
evidence=TAS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=TAS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IDA] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 GO:GO:0005524 GO:GO:0008285 GO:GO:0007399
GO:GO:0005654 GO:GO:0030308 GO:GO:0006338 GO:GO:0000122
GO:GO:0044212 GO:GO:0045111 GO:GO:0000790 GO:GO:0071564
GO:GO:0016514 GO:GO:0071565 EMBL:CH471071 GO:GO:0004386
Pathway_Interaction_DB:ar_tf_pathway GO:GO:0001105 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
KO:K11647 ChiTaRS:SMARCA2 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0008094 EMBL:X72889 EMBL:D26155 EMBL:AL359076 EMBL:AL138755
IPI:IPI00386718 IPI:IPI00514648 PIR:S39580 PIR:S45251
RefSeq:NP_003061.3 RefSeq:NP_620614.2 UniGene:Hs.298990 PDB:2DAT
PDBsum:2DAT ProteinModelPortal:P51531 SMR:P51531 DIP:DIP-29005N
IntAct:P51531 MINT:MINT-1898892 STRING:P51531 PhosphoSite:P51531
DMDM:212276472 PaxDb:P51531 PRIDE:P51531 DNASU:6595
Ensembl:ENST00000349721 Ensembl:ENST00000357248
Ensembl:ENST00000382194 Ensembl:ENST00000382203 GeneID:6595
KEGG:hsa:6595 UCSC:uc003zhc.3 UCSC:uc003zhd.3 CTD:6595
GeneCards:GC09P002005 HGNC:HGNC:11098 HPA:HPA029981 MIM:600014
MIM:601358 neXtProt:NX_P51531 Orphanet:3051 PharmGKB:PA35948
HOGENOM:HOG000172363 HOVERGEN:HBG056636 InParanoid:P51531
OMA:PQEGMHQ PhylomeDB:P51531 EvolutionaryTrace:P51531
GenomeRNAi:6595 NextBio:25649 PMAP-CutDB:P51531 ArrayExpress:P51531
Bgee:P51531 CleanEx:HS_SMARCA2 Genevestigator:P51531
GermOnline:ENSG00000080503 GO:GO:0035887 Uniprot:P51531
Length = 1590
Score = 426 (155.0 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 120/327 (36%), Positives = 170/327 (51%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAI---TYLMLLKHLNNDPGPHLIV 224
LK YQL G+ +++ LY + G ILADEMGLGKTIQ I TYLM K LN GP+LI+
Sbjct: 724 LKHYQLQGLEWMVSLYNNNLNG-ILADEMGLGKTIQTIALITYLMEHKRLN---GPYLII 779
Query: 225 CPASVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFE 284
P S L NW E KW PS + Y G A R L ++G FNVLL Y
Sbjct: 780 VPLSTLSNWTYEFDKWAPSVVKISYKGT--PAMRRSLVPQLRSG---KFNVLLTTYEYII 834
Query: 285 RHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQN 344
+ D+ IL + RW +++DE H +K+ + + +++ A +R++LTGTPLQN
Sbjct: 835 K-------DKHILAKIRWKYMIVDEGHRMKNHHC-KLTQVLNTHYVAPRRILLTGTPLQN 886
Query: 345 DLHELWSLLEFMMPDLFAT-----EDVDLKKLLNGEDRDL--------IGRMKSILGPFI 391
L ELW+LL F++P +F + + + + GE DL I R+ +L PF+
Sbjct: 887 KLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFL 946
Query: 392 LRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVG 451
LRRLK +V QL K+++V M Q+ YR +A+ L+D G
Sbjct: 947 LRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHM--------QAKGILLTDGSEKDKKG 998
Query: 452 VLPQRQISNYFVQFRKIANHPLLVRRI 478
+ + N +Q RKI NHP + + I
Sbjct: 999 KGGAKTLMNTIMQLRKICNHPYMFQHI 1025
>UNIPROTKB|E9PTG1 [details] [associations]
symbol:Smarca2 "Protein Smarca2" species:10116 "Rattus
norvegicus" [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0016514
"SWI/SNF complex" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071778 "WINAC complex" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0045892
GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
OMA:PQEGMHQ GO:GO:0035887 IPI:IPI00464435
Ensembl:ENSRNOT00000016740 ArrayExpress:E9PTG1 Uniprot:E9PTG1
Length = 1597
Score = 426 (155.0 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 120/327 (36%), Positives = 170/327 (51%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAI---TYLMLLKHLNNDPGPHLIV 224
LK YQL G+ +++ LY + G ILADEMGLGKTIQ I TYLM K LN GP+LI+
Sbjct: 731 LKHYQLQGLEWMVSLYNNNLNG-ILADEMGLGKTIQTIALITYLMEHKRLN---GPYLII 786
Query: 225 CPASVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFE 284
P S L NW E KW PS + Y G A R L ++G FNVLL Y
Sbjct: 787 VPLSTLSNWTYEFDKWAPSVVKISYKGT--PAMRRSLVPQLRSG---KFNVLLTTYEYII 841
Query: 285 RHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQN 344
+ D+ IL + RW +++DE H +K+ + + +++ A +R++LTGTPLQN
Sbjct: 842 K-------DKHILAKIRWKYMIVDEGHRMKNHHC-KLTQVLNTHYVAPRRILLTGTPLQN 893
Query: 345 DLHELWSLLEFMMPDLFAT-----EDVDLKKLLNGEDRDL--------IGRMKSILGPFI 391
L ELW+LL F++P +F + + + + GE DL I R+ +L PF+
Sbjct: 894 KLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFL 953
Query: 392 LRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVG 451
LRRLK +V QL K+++V M Q+ YR +A+ L+D G
Sbjct: 954 LRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHM--------QAKGILLTDGSEKDKKG 1005
Query: 452 VLPQRQISNYFVQFRKIANHPLLVRRI 478
+ + N +Q RKI NHP + + I
Sbjct: 1006 KGGAKTLMNTIMQLRKICNHPYMFQHI 1032
>UNIPROTKB|F1MJ46 [details] [associations]
symbol:SMARCA4 "Transcription activator BRG1" species:9913
"Bos taurus" [GO:0071565 "nBAF complex" evidence=IEA] [GO:0071564
"npBAF complex" evidence=IEA] [GO:0060347 "heart trabecula
formation" evidence=IEA] [GO:0060318 "definitive erythrocyte
differentiation" evidence=IEA] [GO:0048730 "epidermis
morphogenesis" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0043388
"positive regulation of DNA binding" evidence=IEA] [GO:0035887
"aortic smooth muscle cell differentiation" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0030216 "keratinocyte
differentiation" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
sequence" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0007403 "glial cell fate determination"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0001835 "blastocyst hatching" evidence=IEA]
[GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
GO:GO:0043966 GO:GO:0043388 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0001835
GO:GO:0007403 GO:GO:0006346 GO:GO:0010424 GO:GO:0060318
GO:GO:0048562 GO:GO:0001832 GO:GO:0005726 GO:GO:0035887
IPI:IPI00693529 OMA:HKPMESM EMBL:DAAA02019479 EMBL:DAAA02019480
EMBL:DAAA02019481 Ensembl:ENSBTAT00000025598 ArrayExpress:F1MJ46
Uniprot:F1MJ46
Length = 1604
Score = 426 (155.0 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 125/330 (37%), Positives = 174/330 (52%)
Query: 167 VLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAI---TYLMLLKHLNNDPGPHLI 223
VLK YQ+ G+ +L+ LY + G ILADEMGLGKTIQ I TYLM K +N GP LI
Sbjct: 745 VLKQYQIKGLEWLVSLYNNNLNG-ILADEMGLGKTIQTIALITYLMEHKRIN---GPFLI 800
Query: 224 VCPASVLENWERELKKWCPSFSVLQYHG--AGRTAYSRELSSLAKAGLPPPFNVLLVCYS 281
+ P S L NW E KW PS + Y G A R A+ +L S G FNVLL Y
Sbjct: 801 IVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRS----G---KFNVLLTTYE 853
Query: 282 LFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTP 341
+ D+ IL + RW +++DE H +K+ + + +++ A +RL+LTGTP
Sbjct: 854 YIIK-------DKHILAKIRWKYMIVDEGHRMKNHHC-KLTQVLNTHYVAPRRLLLTGTP 905
Query: 342 LQNDLHELWSLLEFMMPDLFAT-----EDVDLKKLLNGEDRDL--------IGRMKSILG 388
LQN L ELW+LL F++P +F + + + + GE DL I R+ +L
Sbjct: 906 LQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLR 965
Query: 389 PFILRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLAT 448
PF+LRRLK +V QL K+++V M Q RV YR + +A+ L+D
Sbjct: 966 PFLLRRLKKEVEAQLPEKVEYVIKCDMSALQ----RVL---YRHM-QAKGVLLTDGSEKD 1017
Query: 449 IVGVLPQRQISNYFVQFRKIANHPLLVRRI 478
G + + N +Q RKI NHP + + I
Sbjct: 1018 KKGKGGTKTLMNTIMQLRKICNHPYMFQHI 1047
>UNIPROTKB|A7Z019 [details] [associations]
symbol:SMARCA4 "Transcription activator BRG1" species:9913
"Bos taurus" [GO:0071565 "nBAF complex" evidence=ISS] [GO:0071564
"npBAF complex" evidence=ISS] [GO:0060347 "heart trabecula
formation" evidence=IEA] [GO:0060318 "definitive erythrocyte
differentiation" evidence=IEA] [GO:0048730 "epidermis
morphogenesis" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0043388
"positive regulation of DNA binding" evidence=IEA] [GO:0035887
"aortic smooth muscle cell differentiation" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0030216 "keratinocyte
differentiation" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
sequence" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0007403 "glial cell fate determination"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0001835 "blastocyst hatching" evidence=IEA]
[GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0006351 GO:GO:0003682 GO:GO:0006338
GO:GO:0000122 GO:GO:0071564 GO:GO:0071565 GO:GO:0000902
GO:GO:0004386 GO:GO:0001570 GO:GO:0035116 GO:GO:0005719
GO:GO:0030902 GO:GO:0048730 GO:GO:0000977 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0019827
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347 GO:GO:0043966
GO:GO:0043388 KO:K11647 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 GO:GO:0005726
HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
OrthoDB:EOG418BMJ EMBL:BC153216 IPI:IPI00693529
RefSeq:NP_001099084.1 UniGene:Bt.27590 ProteinModelPortal:A7Z019
SMR:A7Z019 STRING:A7Z019 PRIDE:A7Z019 GeneID:414274 KEGG:bta:414274
CTD:6597 InParanoid:A7Z019 NextBio:20818684 ArrayExpress:A7Z019
Uniprot:A7Z019
Length = 1606
Score = 426 (155.0 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 125/330 (37%), Positives = 174/330 (52%)
Query: 167 VLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAI---TYLMLLKHLNNDPGPHLI 223
VLK YQ+ G+ +L+ LY + G ILADEMGLGKTIQ I TYLM K +N GP LI
Sbjct: 745 VLKQYQIKGLEWLVSLYNNNLNG-ILADEMGLGKTIQTIALITYLMEHKRIN---GPFLI 800
Query: 224 VCPASVLENWERELKKWCPSFSVLQYHG--AGRTAYSRELSSLAKAGLPPPFNVLLVCYS 281
+ P S L NW E KW PS + Y G A R A+ +L S G FNVLL Y
Sbjct: 801 IVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRS----G---KFNVLLTTYE 853
Query: 282 LFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTP 341
+ D+ IL + RW +++DE H +K+ + + +++ A +RL+LTGTP
Sbjct: 854 YIIK-------DKHILAKIRWKYMIVDEGHRMKNHHC-KLTQVLNTHYVAPRRLLLTGTP 905
Query: 342 LQNDLHELWSLLEFMMPDLFAT-----EDVDLKKLLNGEDRDL--------IGRMKSILG 388
LQN L ELW+LL F++P +F + + + + GE DL I R+ +L
Sbjct: 906 LQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLR 965
Query: 389 PFILRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLAT 448
PF+LRRLK +V QL K+++V M Q RV YR + +A+ L+D
Sbjct: 966 PFLLRRLKKEVEAQLPEKVEYVIKCDMSALQ----RVL---YRHM-QAKGVLLTDGSEKD 1017
Query: 449 IVGVLPQRQISNYFVQFRKIANHPLLVRRI 478
G + + N +Q RKI NHP + + I
Sbjct: 1018 KKGKGGTKTLMNTIMQLRKICNHPYMFQHI 1047
>MGI|MGI:88192 [details] [associations]
symbol:Smarca4 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 4"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP;IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=ISO] [GO:0000792 "heterochromatin"
evidence=IDA] [GO:0000902 "cell morphogenesis" evidence=IMP]
[GO:0000977 "RNA polymerase II regulatory region sequence-specific
DNA binding" evidence=IDA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=ISO] [GO:0001570
"vasculogenesis" evidence=IMP] [GO:0001701 "in utero embryonic
development" evidence=IMP] [GO:0001832 "blastocyst growth"
evidence=IMP] [GO:0001835 "blastocyst hatching" evidence=IMP]
[GO:0001889 "liver development" evidence=IMP] [GO:0002039 "p53
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0003713 "transcription
coactivator activity" evidence=ISO] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005719 "nuclear euchromatin" evidence=IDA]
[GO:0005726 "perichromatin fibrils" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0006337 "nucleosome disassembly" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=ISO;IMP] [GO:0006346
"methylation-dependent chromatin silencing" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IMP] [GO:0007403 "glial cell fate determination"
evidence=IMP] [GO:0007507 "heart development" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISO]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=IMP] [GO:0016514 "SWI/SNF complex" evidence=ISO;IDA;TAS]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IMP;TAS] [GO:0019827 "stem cell maintenance" evidence=IMP]
[GO:0022008 "neurogenesis" evidence=IDA] [GO:0030198 "extracellular
matrix organization" evidence=IMP] [GO:0030216 "keratinocyte
differentiation" evidence=IMP] [GO:0030308 "negative regulation of
cell growth" evidence=ISO] [GO:0030900 "forebrain development"
evidence=IMP] [GO:0030902 "hindbrain development" evidence=IMP]
[GO:0030957 "Tat protein binding" evidence=ISO] [GO:0032403
"protein complex binding" evidence=ISO] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IMP] [GO:0035887 "aortic smooth
muscle cell differentiation" evidence=IMP] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISO] [GO:0043388
"positive regulation of DNA binding" evidence=IGI] [GO:0043923
"positive regulation by host of viral transcription" evidence=ISO]
[GO:0043966 "histone H3 acetylation" evidence=IMP] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0048562 "embryonic
organ morphogenesis" evidence=IMP] [GO:0048730 "epidermis
morphogenesis" evidence=IMP] [GO:0050681 "androgen receptor
binding" evidence=ISO] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0060318 "definitive erythrocyte differentiation"
evidence=IMP] [GO:0060347 "heart trabecula formation" evidence=IGI]
[GO:0060766 "negative regulation of androgen receptor signaling
pathway" evidence=ISO] [GO:0070577 "histone acetyl-lysine binding"
evidence=ISO] [GO:0071564 "npBAF complex" evidence=ISO;IDA]
[GO:0071565 "nBAF complex" evidence=IDA] [GO:0071778 "WINAC
complex" evidence=ISO] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 MGI:MGI:88192
GO:GO:0005524 GO:GO:0003714 GO:GO:0030216 GO:GO:0045944
GO:GO:0030198 GO:GO:0030900 GO:GO:0001889 EMBL:CH466522
GO:GO:0006351 GO:GO:0003682 GO:GO:0016887 GO:GO:0006338
GO:GO:0000122 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
GO:GO:0000902 GO:GO:0004386 GO:GO:0001570 GO:GO:0035116
GO:GO:0005719 GO:GO:0030902 GO:GO:0048730 GO:GO:0000977
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0019827 GO:GO:0006334 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
GO:GO:0043966 GO:GO:0043388 KO:K11647 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0001835
GO:GO:0007403 GO:GO:0006346 GO:GO:0010424 GO:GO:0060318
GO:GO:0048562 GO:GO:0001832 GO:GO:0005726 HOGENOM:HOG000172363
HOVERGEN:HBG056636 GO:GO:0035887 OrthoDB:EOG418BMJ CTD:6597
EMBL:AK147285 EMBL:AK160825 EMBL:AK166837 EMBL:BC079560
IPI:IPI00875789 IPI:IPI00955124 RefSeq:NP_001167549.1
RefSeq:NP_001167550.1 RefSeq:NP_035547.2 UniGene:Mm.286593
ProteinModelPortal:Q3TKT4 SMR:Q3TKT4 DIP:DIP-40650N DIP:DIP-59249N
IntAct:Q3TKT4 MINT:MINT-1958721 STRING:Q3TKT4 PhosphoSite:Q3TKT4
PaxDb:Q3TKT4 PRIDE:Q3TKT4 Ensembl:ENSMUST00000034707
Ensembl:ENSMUST00000098948 Ensembl:ENSMUST00000174008 GeneID:20586
KEGG:mmu:20586 UCSC:uc009omd.2 UCSC:uc009ome.2 InParanoid:Q3TUD7
NextBio:298883 Bgee:Q3TKT4 Genevestigator:Q3TKT4 Uniprot:Q3TKT4
Length = 1613
Score = 426 (155.0 bits), Expect = 1.7e-38, P = 1.7e-38
Identities = 125/330 (37%), Positives = 174/330 (52%)
Query: 167 VLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAI---TYLMLLKHLNNDPGPHLI 223
VLK YQ+ G+ +L+ LY + G ILADEMGLGKTIQ I TYLM K +N GP LI
Sbjct: 753 VLKQYQIKGLEWLVSLYNNNLNG-ILADEMGLGKTIQTIALITYLMEHKRIN---GPFLI 808
Query: 224 VCPASVLENWERELKKWCPSFSVLQYHG--AGRTAYSRELSSLAKAGLPPPFNVLLVCYS 281
+ P S L NW E KW PS + Y G A R A+ +L S G FNVLL Y
Sbjct: 809 IVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRS----G---KFNVLLTTYE 861
Query: 282 LFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTP 341
+ D+ IL + RW +++DE H +K+ + + +++ A +RL+LTGTP
Sbjct: 862 YIIK-------DKHILAKIRWKYMIVDEGHRMKNHHC-KLTQVLNTHYVAPRRLLLTGTP 913
Query: 342 LQNDLHELWSLLEFMMPDLFAT-----EDVDLKKLLNGEDRDL--------IGRMKSILG 388
LQN L ELW+LL F++P +F + + + + GE DL I R+ +L
Sbjct: 914 LQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLR 973
Query: 389 PFILRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLAT 448
PF+LRRLK +V QL K+++V M Q RV YR + +A+ L+D
Sbjct: 974 PFLLRRLKKEVEAQLPEKVEYVIKCDMSALQ----RVL---YRHM-QAKGVLLTDGSEKD 1025
Query: 449 IVGVLPQRQISNYFVQFRKIANHPLLVRRI 478
G + + N +Q RKI NHP + + I
Sbjct: 1026 KKGKGGTKTLMNTIMQLRKICNHPYMFQHI 1055
>RGD|621728 [details] [associations]
symbol:Smarca4 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 4"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0000792
"heterochromatin" evidence=ISO] [GO:0000902 "cell morphogenesis"
evidence=ISO] [GO:0000977 "RNA polymerase II regulatory region
sequence-specific DNA binding" evidence=ISO] [GO:0001105 "RNA
polymerase II transcription coactivator activity" evidence=ISO]
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0001701 "in utero
embryonic development" evidence=ISO] [GO:0001832 "blastocyst
growth" evidence=ISO] [GO:0001835 "blastocyst hatching"
evidence=ISO] [GO:0001889 "liver development" evidence=ISO]
[GO:0002039 "p53 binding" evidence=ISO] [GO:0003407 "neural retina
development" evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003713
"transcription coactivator activity" evidence=ISO] [GO:0003714
"transcription corepressor activity" evidence=ISO;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005719 "nuclear euchromatin"
evidence=ISO] [GO:0005726 "perichromatin fibrils" evidence=ISO]
[GO:0006337 "nucleosome disassembly" evidence=ISO;IDA] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0006346
"methylation-dependent chromatin silencing" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA;ISO] [GO:0007403 "glial cell fate determination"
evidence=ISO] [GO:0007507 "heart development" evidence=ISO]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISO]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=ISO] [GO:0016514 "SWI/SNF complex" evidence=ISO;IDA]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0019827 "stem cell
maintenance" evidence=ISO] [GO:0022008 "neurogenesis" evidence=ISO]
[GO:0030198 "extracellular matrix organization" evidence=ISO]
[GO:0030216 "keratinocyte differentiation" evidence=ISO]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0030900 "forebrain development" evidence=ISO] [GO:0030902
"hindbrain development" evidence=ISO] [GO:0030957 "Tat protein
binding" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=IDA] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=ISO] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=ISO] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IDA] [GO:0043388 "positive regulation of DNA
binding" evidence=ISO] [GO:0043923 "positive regulation by host of
viral transcription" evidence=ISO] [GO:0043966 "histone H3
acetylation" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0047485 "protein
N-terminus binding" evidence=ISO] [GO:0048562 "embryonic organ
morphogenesis" evidence=ISO] [GO:0048730 "epidermis morphogenesis"
evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=ISO]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0060318
"definitive erythrocyte differentiation" evidence=ISO] [GO:0060347
"heart trabecula formation" evidence=ISO] [GO:0060766 "negative
regulation of androgen receptor signaling pathway" evidence=ISO]
[GO:0070577 "histone acetyl-lysine binding" evidence=ISO]
[GO:0071564 "npBAF complex" evidence=ISO;ISS] [GO:0071565 "nBAF
complex" evidence=ISO;ISS] [GO:0071778 "WINAC complex"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524 GO:GO:0003714
GO:GO:0007399 GO:GO:0006355 GO:GO:0032403 GO:GO:0003677
GO:GO:0006351 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
GO:GO:0004386 GO:GO:0006337 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 HOGENOM:HOG000172363
HOVERGEN:HBG056636 EMBL:AJ504723 IPI:IPI00781891 UniGene:Rn.23417
ProteinModelPortal:Q8K1P7 SMR:Q8K1P7 IntAct:Q8K1P7 STRING:Q8K1P7
PhosphoSite:Q8K1P7 PRIDE:Q8K1P7 UCSC:RGD:621728 ArrayExpress:Q8K1P7
Genevestigator:Q8K1P7 Uniprot:Q8K1P7
Length = 1613
Score = 426 (155.0 bits), Expect = 1.7e-38, P = 1.7e-38
Identities = 125/330 (37%), Positives = 174/330 (52%)
Query: 167 VLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAI---TYLMLLKHLNNDPGPHLI 223
VLK YQ+ G+ +L+ LY + G ILADEMGLGKTIQ I TYLM K +N GP LI
Sbjct: 753 VLKQYQIKGLEWLVSLYNNNLNG-ILADEMGLGKTIQTIALITYLMEHKRIN---GPFLI 808
Query: 224 VCPASVLENWERELKKWCPSFSVLQYHG--AGRTAYSRELSSLAKAGLPPPFNVLLVCYS 281
+ P S L NW E KW PS + Y G A R A+ +L S G FNVLL Y
Sbjct: 809 IVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRS----G---KFNVLLTTYE 861
Query: 282 LFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTP 341
+ D+ IL + RW +++DE H +K+ + + +++ A +RL+LTGTP
Sbjct: 862 YIIK-------DKHILAKIRWKYMIVDEGHRMKNHHC-KLTQVLNTHYVAPRRLLLTGTP 913
Query: 342 LQNDLHELWSLLEFMMPDLFAT-----EDVDLKKLLNGEDRDL--------IGRMKSILG 388
LQN L ELW+LL F++P +F + + + + GE DL I R+ +L
Sbjct: 914 LQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLR 973
Query: 389 PFILRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLAT 448
PF+LRRLK +V QL K+++V M Q RV YR + +A+ L+D
Sbjct: 974 PFLLRRLKKEVEAQLPEKVEYVIKCDMSALQ----RVL---YRHM-QAKGVLLTDGSEKD 1025
Query: 449 IVGVLPQRQISNYFVQFRKIANHPLLVRRI 478
G + + N +Q RKI NHP + + I
Sbjct: 1026 KKGKGGTKTLMNTIMQLRKICNHPYMFQHI 1055
>UNIPROTKB|E2RJ89 [details] [associations]
symbol:SMARCA4 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
CTD:6597 EMBL:AAEX03012414 RefSeq:XP_867683.1
Ensembl:ENSCAFT00000027907 GeneID:476710 KEGG:cfa:476710
OMA:HKPMESM Uniprot:E2RJ89
Length = 1614
Score = 426 (155.0 bits), Expect = 1.7e-38, P = 1.7e-38
Identities = 125/330 (37%), Positives = 174/330 (52%)
Query: 167 VLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAI---TYLMLLKHLNNDPGPHLI 223
VLK YQ+ G+ +L+ LY + G ILADEMGLGKTIQ I TYLM K +N GP LI
Sbjct: 753 VLKQYQIKGLEWLVSLYNNNLNG-ILADEMGLGKTIQTIALITYLMEHKRIN---GPFLI 808
Query: 224 VCPASVLENWERELKKWCPSFSVLQYHG--AGRTAYSRELSSLAKAGLPPPFNVLLVCYS 281
+ P S L NW E KW PS + Y G A R A+ +L S G FNVLL Y
Sbjct: 809 IVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRS----G---KFNVLLTTYE 861
Query: 282 LFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTP 341
+ D+ IL + RW +++DE H +K+ + + +++ A +RL+LTGTP
Sbjct: 862 YIIK-------DKHILAKIRWKYMIVDEGHRMKNHHC-KLTQVLNTHYVAPRRLLLTGTP 913
Query: 342 LQNDLHELWSLLEFMMPDLFAT-----EDVDLKKLLNGEDRDL--------IGRMKSILG 388
LQN L ELW+LL F++P +F + + + + GE DL I R+ +L
Sbjct: 914 LQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLR 973
Query: 389 PFILRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLAT 448
PF+LRRLK +V QL K+++V M Q RV YR + +A+ L+D
Sbjct: 974 PFLLRRLKKEVEAQLPEKVEYVIKCDMSALQ----RVL---YRHM-QAKGVLLTDGSEKD 1025
Query: 449 IVGVLPQRQISNYFVQFRKIANHPLLVRRI 478
G + + N +Q RKI NHP + + I
Sbjct: 1026 KKGKGGTKTLMNTIMQLRKICNHPYMFQHI 1055
>UNIPROTKB|G3V790 [details] [associations]
symbol:Smarca4 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 4, isoform
CRA_b" species:10116 "Rattus norvegicus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000977 "RNA
polymerase II regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001835
"blastocyst hatching" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005719 "nuclear euchromatin"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=IEA]
[GO:0007403 "glial cell fate determination" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=IEA] [GO:0019827 "stem cell maintenance" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0030216 "keratinocyte differentiation" evidence=IEA]
[GO:0030900 "forebrain development" evidence=IEA] [GO:0030902
"hindbrain development" evidence=IEA] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IEA] [GO:0035887 "aortic smooth
muscle cell differentiation" evidence=IEA] [GO:0043388 "positive
regulation of DNA binding" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048562 "embryonic organ morphogenesis" evidence=IEA]
[GO:0048730 "epidermis morphogenesis" evidence=IEA] [GO:0060318
"definitive erythrocyte differentiation" evidence=IEA] [GO:0060347
"heart trabecula formation" evidence=IEA] [GO:0071564 "npBAF
complex" evidence=IEA] [GO:0071565 "nBAF complex" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 EMBL:CH473993
UniGene:Rn.23417 Ensembl:ENSRNOT00000013165 Uniprot:G3V790
Length = 1614
Score = 426 (155.0 bits), Expect = 1.7e-38, P = 1.7e-38
Identities = 125/330 (37%), Positives = 174/330 (52%)
Query: 167 VLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAI---TYLMLLKHLNNDPGPHLI 223
VLK YQ+ G+ +L+ LY + G ILADEMGLGKTIQ I TYLM K +N GP LI
Sbjct: 753 VLKQYQIKGLEWLVSLYNNNLNG-ILADEMGLGKTIQTIALITYLMEHKRIN---GPFLI 808
Query: 224 VCPASVLENWERELKKWCPSFSVLQYHG--AGRTAYSRELSSLAKAGLPPPFNVLLVCYS 281
+ P S L NW E KW PS + Y G A R A+ +L S G FNVLL Y
Sbjct: 809 IVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRS----G---KFNVLLTTYE 861
Query: 282 LFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTP 341
+ D+ IL + RW +++DE H +K+ + + +++ A +RL+LTGTP
Sbjct: 862 YIIK-------DKHILAKIRWKYMIVDEGHRMKNHHC-KLTQVLNTHYVAPRRLLLTGTP 913
Query: 342 LQNDLHELWSLLEFMMPDLFAT-----EDVDLKKLLNGEDRDL--------IGRMKSILG 388
LQN L ELW+LL F++P +F + + + + GE DL I R+ +L
Sbjct: 914 LQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLR 973
Query: 389 PFILRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLAT 448
PF+LRRLK +V QL K+++V M Q RV YR + +A+ L+D
Sbjct: 974 PFLLRRLKKEVEAQLPEKVEYVIKCDMSALQ----RVL---YRHM-QAKGVLLTDGSEKD 1025
Query: 449 IVGVLPQRQISNYFVQFRKIANHPLLVRRI 478
G + + N +Q RKI NHP + + I
Sbjct: 1026 KKGKGGTKTLMNTIMQLRKICNHPYMFQHI 1055
>UNIPROTKB|F1M6Y4 [details] [associations]
symbol:Smarca4 "Transcription activator BRG1" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000792 "heterochromatin" evidence=IEA] [GO:0000902 "cell
morphogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001832 "blastocyst
growth" evidence=IEA] [GO:0001835 "blastocyst hatching"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0005726
"perichromatin fibrils" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IEA] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=IEA] [GO:0007403 "glial cell fate
determination" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0010424 "DNA methylation on cytosine
within a CG sequence" evidence=IEA] [GO:0019827 "stem cell
maintenance" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0030216 "keratinocyte
differentiation" evidence=IEA] [GO:0030900 "forebrain development"
evidence=IEA] [GO:0030902 "hindbrain development" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0035887 "aortic smooth muscle cell differentiation"
evidence=IEA] [GO:0043388 "positive regulation of DNA binding"
evidence=IEA] [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0048730 "epidermis morphogenesis"
evidence=IEA] [GO:0060318 "definitive erythrocyte differentiation"
evidence=IEA] [GO:0060347 "heart trabecula formation" evidence=IEA]
[GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
GO:GO:0043966 GO:GO:0043388 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 GO:GO:0005726
GO:GO:0035887 IPI:IPI00951882 Ensembl:ENSRNOT00000060927
ArrayExpress:F1M6Y4 Uniprot:F1M6Y4
Length = 1618
Score = 426 (155.0 bits), Expect = 1.7e-38, P = 1.7e-38
Identities = 125/330 (37%), Positives = 174/330 (52%)
Query: 167 VLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAI---TYLMLLKHLNNDPGPHLI 223
VLK YQ+ G+ +L+ LY + G ILADEMGLGKTIQ I TYLM K +N GP LI
Sbjct: 753 VLKQYQIKGLEWLVSLYNNNLNG-ILADEMGLGKTIQTIALITYLMEHKRIN---GPFLI 808
Query: 224 VCPASVLENWERELKKWCPSFSVLQYHG--AGRTAYSRELSSLAKAGLPPPFNVLLVCYS 281
+ P S L NW E KW PS + Y G A R A+ +L S G FNVLL Y
Sbjct: 809 IVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRS----G---KFNVLLTTYE 861
Query: 282 LFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTP 341
+ D+ IL + RW +++DE H +K+ + + +++ A +RL+LTGTP
Sbjct: 862 YIIK-------DKHILAKIRWKYMIVDEGHRMKNHHC-KLTQVLNTHYVAPRRLLLTGTP 913
Query: 342 LQNDLHELWSLLEFMMPDLFAT-----EDVDLKKLLNGEDRDL--------IGRMKSILG 388
LQN L ELW+LL F++P +F + + + + GE DL I R+ +L
Sbjct: 914 LQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLR 973
Query: 389 PFILRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLAT 448
PF+LRRLK +V QL K+++V M Q RV YR + +A+ L+D
Sbjct: 974 PFLLRRLKKEVEAQLPEKVEYVIKCDMSALQ----RVL---YRHM-QAKGVLLTDGSEKD 1025
Query: 449 IVGVLPQRQISNYFVQFRKIANHPLLVRRI 478
G + + N +Q RKI NHP + + I
Sbjct: 1026 KKGKGGTKTLMNTIMQLRKICNHPYMFQHI 1055
>UNIPROTKB|P51532 [details] [associations]
symbol:SMARCA4 "Transcription activator BRG1" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0016514
"SWI/SNF complex" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0071564 "npBAF complex" evidence=ISS;IDA]
[GO:0071565 "nBAF complex" evidence=ISS] [GO:0006338 "chromatin
remodeling" evidence=IC;IDA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IDA] [GO:0000790
"nuclear chromatin" evidence=IDA] [GO:0071778 "WINAC complex"
evidence=IDA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP;IDA] [GO:0030308 "negative regulation
of cell growth" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI;IDA]
[GO:0060766 "negative regulation of androgen receptor signaling
pathway" evidence=IMP] [GO:0050681 "androgen receptor binding"
evidence=IPI] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IGI] [GO:0045749 "negative regulation of S phase of
mitotic cell cycle" evidence=TAS] [GO:0070577 "histone
acetyl-lysine binding" evidence=IDA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0002039 "p53 binding" evidence=IPI]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0003713 "transcription
coactivator activity" evidence=IMP;NAS] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=NAS]
[GO:0006337 "nucleosome disassembly" evidence=IDA] [GO:0043923
"positive regulation by host of viral transcription" evidence=IMP]
[GO:0030957 "Tat protein binding" evidence=IPI] [GO:0003407 "neural
retina development" evidence=IEP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IMP] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 GO:GO:0005524 GO:GO:0003714 GO:GO:0007399
GO:GO:0051091 GO:GO:0030308 GO:GO:0003677 GO:GO:0006338
GO:GO:0000122 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0003407 GO:GO:0071565 GO:GO:0004386 EMBL:CH471106
GO:GO:0001105 GO:GO:0045749 Orphanet:1465 GO:GO:0006337
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0070577
InterPro:IPR018359 GO:GO:0071778 KO:K11647 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 EMBL:AC011442 GO:GO:0008094 GO:GO:0060766
GO:GO:0043923 EMBL:AC011485 HOGENOM:HOG000172363 HOVERGEN:HBG056636
CTD:6597 EMBL:U29175 EMBL:D26156 EMBL:AF254822 EMBL:EU430756
EMBL:EU430757 EMBL:EU430758 EMBL:EU430759 EMBL:AC006127
IPI:IPI00293426 IPI:IPI00900285 IPI:IPI00900328 IPI:IPI00900338
IPI:IPI01016040 PIR:S45252 RefSeq:NP_001122316.1
RefSeq:NP_001122317.1 RefSeq:NP_001122318.1 RefSeq:NP_001122319.1
RefSeq:NP_001122320.1 RefSeq:NP_003063.2 UniGene:Hs.327527 PDB:2GRC
PDB:2H60 PDB:3UVD PDBsum:2GRC PDBsum:2H60 PDBsum:3UVD
ProteinModelPortal:P51532 SMR:P51532 DIP:DIP-24249N IntAct:P51532
MINT:MINT-204078 STRING:P51532 PhosphoSite:P51532 DMDM:116242792
PaxDb:P51532 PRIDE:P51532 Ensembl:ENST00000344626
Ensembl:ENST00000413806 Ensembl:ENST00000429416
Ensembl:ENST00000444061 Ensembl:ENST00000450717
Ensembl:ENST00000541122 GeneID:6597 KEGG:hsa:6597 UCSC:uc002mqf.4
GeneCards:GC19P011071 HGNC:HGNC:11100 HPA:CAB004208 MIM:603254
MIM:613325 MIM:614609 neXtProt:NX_P51532 Orphanet:231108
PharmGKB:PA35950 ChiTaRS:SMARCA4 EvolutionaryTrace:P51532
GenomeRNAi:6597 NextBio:25661 ArrayExpress:P51532 Bgee:P51532
CleanEx:HS_SMARCA4 Genevestigator:P51532 GermOnline:ENSG00000127616
Uniprot:P51532
Length = 1647
Score = 426 (155.0 bits), Expect = 1.7e-38, P = 1.7e-38
Identities = 125/330 (37%), Positives = 174/330 (52%)
Query: 167 VLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAI---TYLMLLKHLNNDPGPHLI 223
VLK YQ+ G+ +L+ LY + G ILADEMGLGKTIQ I TYLM K +N GP LI
Sbjct: 753 VLKQYQIKGLEWLVSLYNNNLNG-ILADEMGLGKTIQTIALITYLMEHKRIN---GPFLI 808
Query: 224 VCPASVLENWERELKKWCPSFSVLQYHG--AGRTAYSRELSSLAKAGLPPPFNVLLVCYS 281
+ P S L NW E KW PS + Y G A R A+ +L S G FNVLL Y
Sbjct: 809 IVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRS----G---KFNVLLTTYE 861
Query: 282 LFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTP 341
+ D+ IL + RW +++DE H +K+ + + +++ A +RL+LTGTP
Sbjct: 862 YIIK-------DKHILAKIRWKYMIVDEGHRMKNHHC-KLTQVLNTHYVAPRRLLLTGTP 913
Query: 342 LQNDLHELWSLLEFMMPDLFAT-----EDVDLKKLLNGEDRDL--------IGRMKSILG 388
LQN L ELW+LL F++P +F + + + + GE DL I R+ +L
Sbjct: 914 LQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLR 973
Query: 389 PFILRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLAT 448
PF+LRRLK +V QL K+++V M Q RV YR + +A+ L+D
Sbjct: 974 PFLLRRLKKEVEAQLPEKVEYVIKCDMSALQ----RVL---YRHM-QAKGVLLTDGSEKD 1025
Query: 449 IVGVLPQRQISNYFVQFRKIANHPLLVRRI 478
G + + N +Q RKI NHP + + I
Sbjct: 1026 KKGKGGTKTLMNTIMQLRKICNHPYMFQHI 1055
>TAIR|locus:2173644 [details] [associations]
symbol:CHR1 "chromatin remodeling 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IMP]
[GO:0044030 "regulation of DNA methylation" evidence=IMP]
[GO:0051574 "positive regulation of histone H3-K9 methylation"
evidence=IMP] [GO:0000786 "nucleosome" evidence=IDA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IMP] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0090241 "negative regulation of
histone H4 acetylation" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006344 "maintenance of chromatin silencing"
evidence=IMP] [GO:0009294 "DNA mediated transformation"
evidence=IMP] [GO:0032197 "transposition, RNA-mediated"
evidence=IMP] [GO:0006342 "chromatin silencing" evidence=RCA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=IMP;RCA] [GO:0008283 "cell proliferation" evidence=RCA]
[GO:0016246 "RNA interference" evidence=RCA] [GO:0016572 "histone
phosphorylation" evidence=RCA] [GO:0031048 "chromatin silencing by
small RNA" evidence=RCA] [GO:0051567 "histone H3-K9 methylation"
evidence=RCA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0006351 GO:GO:0004003 GO:GO:0006349 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0009294
EMBL:AB018119 GO:GO:0000786 GO:GO:0051574 GO:GO:0044030
GO:GO:0090241 GO:GO:0032197 EMBL:AF143940 EMBL:AY099638
EMBL:BT002161 EMBL:AY699010 EMBL:AY699011 IPI:IPI00524705
RefSeq:NP_201476.1 UniGene:At.28851 ProteinModelPortal:Q9XFH4
SMR:Q9XFH4 STRING:Q9XFH4 PaxDb:Q9XFH4 PRIDE:Q9XFH4
EnsemblPlants:AT5G66750.1 GeneID:836808 KEGG:ath:AT5G66750
TAIR:At5g66750 HOGENOM:HOG000172362 InParanoid:Q9XFH4 OMA:ETFYTAI
PhylomeDB:Q9XFH4 ProtClustDB:CLSN2686877 Genevestigator:Q9XFH4
GO:GO:0006344 GO:GO:0006346 Uniprot:Q9XFH4
Length = 764
Score = 419 (152.6 bits), Expect = 1.7e-38, P = 1.7e-38
Identities = 113/323 (34%), Positives = 171/323 (52%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
LK YQL GV +L+ L++ G+ G ILAD+MGLGKTIQ I +L LK N GP+L++ P
Sbjct: 202 LKSYQLKGVKWLISLWQNGLNG-ILADQMGLGKTIQTIGFLSHLKG-NGLDGPYLVIAPL 259
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
S L NW E+ ++ PS + + YHG + K + P F +++ Y
Sbjct: 260 STLSNWFNEIARFTPSINAIIYHGDKNQRDELRRKHMPKT-VGPKFPIVITSYE------ 312
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
V D ++IL+ + W V++DE H LK+ + L + + +L+LTGTPLQN+L
Sbjct: 313 VAMNDAKRILRHYPWKYVVIDEGHRLKNHKCKLLRELKHL--KMDNKLLLTGTPLQNNLS 370
Query: 348 ELWSLLEFMMPDLFATED-----VDL----KKLLNGEDRD-----LIGRMKSILGPFILR 393
ELWSLL F++PD+F + D D K E+ + ++ ++ IL PFILR
Sbjct: 371 ELWSLLNFILPDIFTSHDEFESWFDFSEKNKNEATKEEEEKRRAQVVSKLHGILRPFILR 430
Query: 394 RLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVL 453
R+K DV L K + + Y TM Q+ +E+ V+ A L + I G
Sbjct: 431 RMKCDVELSLPRKKEIIMYATMTDHQKK-----FQEH-LVNNTLEAHLGEN---AIRGQG 481
Query: 454 PQRQISNYFVQFRKIANHPLLVR 476
+ +++N +Q RK NHP L++
Sbjct: 482 WKGKLNNLVIQLRKNCNHPDLLQ 504
>UNIPROTKB|Q9HBD4 [details] [associations]
symbol:SMARCA4 "SMARCA4 isoform 2" species:9606 "Homo
sapiens" [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000792 "heterochromatin" evidence=IEA] [GO:0000902 "cell
morphogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001832 "blastocyst
growth" evidence=IEA] [GO:0001835 "blastocyst hatching"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005719 "nuclear
euchromatin" evidence=IEA] [GO:0005726 "perichromatin fibrils"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=IEA] [GO:0007403 "glial cell fate determination"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
sequence" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0030198 "extracellular matrix organization"
evidence=IEA] [GO:0030216 "keratinocyte differentiation"
evidence=IEA] [GO:0030900 "forebrain development" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=IEA] [GO:0035887
"aortic smooth muscle cell differentiation" evidence=IEA]
[GO:0043388 "positive regulation of DNA binding" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IEA] [GO:0048730 "epidermis morphogenesis" evidence=IEA]
[GO:0060318 "definitive erythrocyte differentiation" evidence=IEA]
[GO:0060347 "heart trabecula formation" evidence=IEA] [GO:0071564
"npBAF complex" evidence=IEA] [GO:0071565 "nBAF complex"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
EMBL:CH471106 GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792
GO:GO:0060347 GO:GO:0043966 GO:GO:0043388 KO:K11647
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 EMBL:AC011442
GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 EMBL:AC011485
GO:GO:0005726 HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
CTD:6597 EMBL:AF254822 EMBL:AC006127 UniGene:Hs.327527 GeneID:6597
KEGG:hsa:6597 HGNC:HGNC:11100 PharmGKB:PA35950 ChiTaRS:SMARCA4
GenomeRNAi:6597 NextBio:25661 IPI:IPI00900269 RefSeq:NP_001122321.1
SMR:Q9HBD4 STRING:Q9HBD4 Ensembl:ENST00000358026 UCSC:uc010dxo.3
Uniprot:Q9HBD4
Length = 1679
Score = 426 (155.0 bits), Expect = 1.8e-38, P = 1.8e-38
Identities = 125/330 (37%), Positives = 174/330 (52%)
Query: 167 VLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAI---TYLMLLKHLNNDPGPHLI 223
VLK YQ+ G+ +L+ LY + G ILADEMGLGKTIQ I TYLM K +N GP LI
Sbjct: 753 VLKQYQIKGLEWLVSLYNNNLNG-ILADEMGLGKTIQTIALITYLMEHKRIN---GPFLI 808
Query: 224 VCPASVLENWERELKKWCPSFSVLQYHG--AGRTAYSRELSSLAKAGLPPPFNVLLVCYS 281
+ P S L NW E KW PS + Y G A R A+ +L S G FNVLL Y
Sbjct: 809 IVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRS----G---KFNVLLTTYE 861
Query: 282 LFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTP 341
+ D+ IL + RW +++DE H +K+ + + +++ A +RL+LTGTP
Sbjct: 862 YIIK-------DKHILAKIRWKYMIVDEGHRMKNHHC-KLTQVLNTHYVAPRRLLLTGTP 913
Query: 342 LQNDLHELWSLLEFMMPDLFAT-----EDVDLKKLLNGEDRDL--------IGRMKSILG 388
LQN L ELW+LL F++P +F + + + + GE DL I R+ +L
Sbjct: 914 LQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLR 973
Query: 389 PFILRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLAT 448
PF+LRRLK +V QL K+++V M Q RV YR + +A+ L+D
Sbjct: 974 PFLLRRLKKEVEAQLPEKVEYVIKCDMSALQ----RVL---YRHM-QAKGVLLTDGSEKD 1025
Query: 449 IVGVLPQRQISNYFVQFRKIANHPLLVRRI 478
G + + N +Q RKI NHP + + I
Sbjct: 1026 KKGKGGTKTLMNTIMQLRKICNHPYMFQHI 1055
>POMBASE|SPAC11E3.01c [details] [associations]
symbol:swr1 "SNF2 family helicase Swr1" species:4896
"Schizosaccharomyces pombe" [GO:0000812 "Swr1 complex"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISM] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IPI] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043486 "histone exchange" evidence=ISO] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC11E3.01c GO:GO:0005524
EMBL:CU329670 GO:GO:0006355 GenomeReviews:CU329670_GR GO:GO:0003677
GO:GO:0006351 GO:GO:0000812 GO:GO:0004003 GO:GO:0043486
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 PROSITE:PS51204 KO:K11681 HOGENOM:HOG000186095
OrthoDB:EOG49S9FK PIR:T37528 RefSeq:XP_001713118.1
ProteinModelPortal:O13682 STRING:O13682 EnsemblFungi:SPAC11E3.01c.1
GeneID:3361561 KEGG:spo:SPAC11E3.01c OMA:VKNEREG NextBio:20811602
Uniprot:O13682
Length = 1288
Score = 422 (153.6 bits), Expect = 3.0e-38, P = 3.0e-38
Identities = 118/332 (35%), Positives = 180/332 (54%)
Query: 164 FQPVLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLI 223
F+ L+ YQ G+ +L L+ G ILADEMGLGKTIQ I L L + GPHLI
Sbjct: 443 FRGTLREYQQYGLEWLTALHDSNTNG-ILADEMGLGKTIQTIALLAHLACEKENWGPHLI 501
Query: 224 VCPASVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLF 283
+ P SV+ NWE E KK+ P F +L Y+G + + S K P ++V + Y L
Sbjct: 502 IVPTSVMLNWEMEFKKFLPGFKILTYYGNPQERKEKR-SGWYK---PDTWHVCITSYQL- 556
Query: 284 ERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQ 343
V Q D + +R +W +++DEAH +K+ S RW++L++ NA RL+LTGTPLQ
Sbjct: 557 ----VLQ--DHQPFRRKKWQYMILDEAHNIKNFRSQRWQSLLNF--NAEHRLLLTGTPLQ 608
Query: 344 NDLHELWSLLEFMMP-------DLFAT-EDVD------LKKLLN-GEDRD-----LIGRM 383
N+L ELWSLL F+MP FA +D + +L+ G+D + + ++
Sbjct: 609 NNLVELWSLLYFLMPAGVTQNNSAFANLKDFQDWFSKPMDRLIEEGQDMNPEAMNTVAKL 668
Query: 384 KSILGPFILRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAK-LS 442
+L P++LRRLK++V +Q+ K + V Y + + Q Y +++ ++RAR + L+
Sbjct: 669 HRVLRPYLLRRLKTEVEKQMPAKYEHVVYCQLSKRQRFLY----DDF--INRARTREILA 722
Query: 443 DADLATIVGVLPQRQISNYFVQFRKIANHPLL 474
+ +I+ N +Q RK+ NHP L
Sbjct: 723 SGNFMSII---------NCLMQLRKVCNHPNL 745
>DICTYBASE|DDB_G0285205 [details] [associations]
symbol:snf2a "SNF2-related protein SNF2a"
species:44689 "Dictyostelium discoideum" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
SMART:SM00490 dictyBase:DDB_G0285205 GO:GO:0005524 GO:GO:0003677
EMBL:AAFI02000075 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 KO:K11647 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 RefSeq:XP_638342.2
ProteinModelPortal:Q54NM0 STRING:Q54NM0 PRIDE:Q54NM0
EnsemblProtists:DDB0233441 GeneID:8624967 KEGG:ddi:DDB_G0285205
OMA:HASKHRV Uniprot:Q54NM0
Length = 1604
Score = 421 (153.3 bits), Expect = 5.6e-38, P = 5.6e-38
Identities = 121/342 (35%), Positives = 174/342 (50%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
LK YQ+ G+ +L+ LY + + G ILADEMGLGKT+Q I ++ L N P L+V P
Sbjct: 624 LKEYQVTGLEWLISLYTRNLNG-ILADEMGLGKTVQTIAFISFLYERMNVREPFLVVAPL 682
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
S + NW E +W P V+ Y G + RE + P N V + FE +
Sbjct: 683 STISNWVSEFARWSPKLHVIVYKG--KQDERRETARTI------PRNAFCVVITSFE-YI 733
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
++ DRK L R W +++DE H +K+KNS L ++ RL+LTGTPLQNDL
Sbjct: 734 IK---DRKTLGRVHWIYIIIDEGHRIKNKNSKLSVQLRQY--HSRNRLLLTGTPLQNDLG 788
Query: 348 ELWSLLEFMMPDLFATEDVDL-----------KKLLN-GEDRDLI--GRMKSILGPFILR 393
ELW+LL F++P +F + D K L+N E+ LI R+ +L F+LR
Sbjct: 789 ELWALLNFLLPTIFNSADTFQNWFNAPFQAKGKNLINVNEEESLIIINRLHQVLRFFLLR 848
Query: 394 RLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVL 453
RLKSDV QL K + V M Q YR ++ EY + +K + G L
Sbjct: 849 RLKSDVESQLPDKKEKVIKCNMSALQIAMYR-SLVEYGVLPIDPDSKEGRS------GRL 901
Query: 454 PQRQISNYFVQFRKIANHPLLVRRIYS-DDDVVRFAKKLHPM 494
+ +N Q +KI NHP L + + ++D++R + K M
Sbjct: 902 KMKGFNNIVKQLQKICNHPYLFKDEWDINEDLIRTSGKFDTM 943
>GENEDB_PFALCIPARUM|PF11_0053 [details] [associations]
symbol:PF11_0053 "PfSNF2L" species:5833
"Plasmodium falciparum" [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008026 "ATP-dependent helicase
activity" evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0008026
EMBL:AE014186 GO:GO:0008094 KO:K01509 RefSeq:XP_001347729.1
ProteinModelPortal:Q8IIW0 IntAct:Q8IIW0 MINT:MINT-1585538
EnsemblProtists:PF11_0053:mRNA GeneID:810605 KEGG:pfa:PF11_0053
EuPathDB:PlasmoDB:PF3D7_1104200 HOGENOM:HOG000282197
ProtClustDB:CLSZ2444952 Uniprot:Q8IIW0
Length = 1426
Score = 419 (152.6 bits), Expect = 7.5e-38, P = 7.5e-38
Identities = 103/263 (39%), Positives = 155/263 (58%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
+KPYQL G+N+L LYR I G ILADEMGLGKT+Q I+ L L+ N +I+CP
Sbjct: 322 MKPYQLEGLNWLYQLYRFKING-ILADEMGLGKTLQTISLLCYLRFNKNIKKKSIIICPR 380
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
S L+NW E+KKWC +Y+G +EL+ + L F+VLL Y + +
Sbjct: 381 STLDNWYEEIKKWCTPMKAFKYYG--NKDQRKELN---RNLLHSDFDVLLTTYEIVIK-- 433
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
D+ L W +++DEAH +K++ S ++ + R+ N RL++TGTPL N+L
Sbjct: 434 -----DKSALYDIDWFFLVIDEAHRIKNEKSVLSSSVRFL-RSEN-RLLITGTPLHNNLK 486
Query: 348 ELWSLLEFMMPDLFA-TEDVD----LKKLLNGEDR--DLIGRMKSILGPFILRRLKSDVM 400
ELWSLL F+MP +F +E+ D + K+ +++ ++I ++ +IL PF+LRRLK +V
Sbjct: 487 ELWSLLNFLMPKIFDNSEEFDNLFNISKISTNDNKQSEIITQLHTILKPFMLRRLKVEVE 546
Query: 401 QQLVPKIQWVEYVTMERPQEDAY 423
Q L PK + +V M + Q+ Y
Sbjct: 547 QSLPPKREIYIFVGMSKLQKKLY 569
Score = 232 (86.7 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 70/209 (33%), Positives = 113/209 (54%)
Query: 273 FNVLLVCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNAN 332
F+VLL Y + + D+ L W +++DEAH +K++ S ++ + R+ N
Sbjct: 421 FDVLLTTYEIVIK-------DKSALYDIDWFFLVIDEAHRIKNEKSVLSSSVRFL-RSEN 472
Query: 333 QRLMLTGTPLQNDLHELWSLLEFMMPDLFA-TEDVD----LKKLLNGEDR--DLIGRMKS 385
RL++TGTPL N+L ELWSLL F+MP +F +E+ D + K+ +++ ++I ++ +
Sbjct: 473 -RLLITGTPLHNNLKELWSLLNFLMPKIFDNSEEFDNLFNISKISTNDNKQSEIITQLHT 531
Query: 386 ILGPFILRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDAD 445
IL PF+LRRLK +V Q L PK + +V M + Q+ Y + +K D
Sbjct: 532 ILKPFMLRRLKVEVEQSLPPKREIYIFVGMSKLQKKLYSDIL-----------SKNIDV- 579
Query: 446 LATIVGVLPQRQISNYFVQFRKIANHPLL 474
L + G + Q+ N +Q RK NHP L
Sbjct: 580 LNAMTG--SKNQMLNILMQLRKCCNHPYL 606
>UNIPROTKB|Q8IIW0 [details] [associations]
symbol:PF11_0053 "PfSNF2L" species:36329 "Plasmodium
falciparum 3D7" [GO:0006338 "chromatin remodeling" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0008026
EMBL:AE014186 GO:GO:0008094 KO:K01509 RefSeq:XP_001347729.1
ProteinModelPortal:Q8IIW0 IntAct:Q8IIW0 MINT:MINT-1585538
EnsemblProtists:PF11_0053:mRNA GeneID:810605 KEGG:pfa:PF11_0053
EuPathDB:PlasmoDB:PF3D7_1104200 HOGENOM:HOG000282197
ProtClustDB:CLSZ2444952 Uniprot:Q8IIW0
Length = 1426
Score = 419 (152.6 bits), Expect = 7.5e-38, P = 7.5e-38
Identities = 103/263 (39%), Positives = 155/263 (58%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
+KPYQL G+N+L LYR I G ILADEMGLGKT+Q I+ L L+ N +I+CP
Sbjct: 322 MKPYQLEGLNWLYQLYRFKING-ILADEMGLGKTLQTISLLCYLRFNKNIKKKSIIICPR 380
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
S L+NW E+KKWC +Y+G +EL+ + L F+VLL Y + +
Sbjct: 381 STLDNWYEEIKKWCTPMKAFKYYG--NKDQRKELN---RNLLHSDFDVLLTTYEIVIK-- 433
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
D+ L W +++DEAH +K++ S ++ + R+ N RL++TGTPL N+L
Sbjct: 434 -----DKSALYDIDWFFLVIDEAHRIKNEKSVLSSSVRFL-RSEN-RLLITGTPLHNNLK 486
Query: 348 ELWSLLEFMMPDLFA-TEDVD----LKKLLNGEDR--DLIGRMKSILGPFILRRLKSDVM 400
ELWSLL F+MP +F +E+ D + K+ +++ ++I ++ +IL PF+LRRLK +V
Sbjct: 487 ELWSLLNFLMPKIFDNSEEFDNLFNISKISTNDNKQSEIITQLHTILKPFMLRRLKVEVE 546
Query: 401 QQLVPKIQWVEYVTMERPQEDAY 423
Q L PK + +V M + Q+ Y
Sbjct: 547 QSLPPKREIYIFVGMSKLQKKLY 569
Score = 232 (86.7 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 70/209 (33%), Positives = 113/209 (54%)
Query: 273 FNVLLVCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNAN 332
F+VLL Y + + D+ L W +++DEAH +K++ S ++ + R+ N
Sbjct: 421 FDVLLTTYEIVIK-------DKSALYDIDWFFLVIDEAHRIKNEKSVLSSSVRFL-RSEN 472
Query: 333 QRLMLTGTPLQNDLHELWSLLEFMMPDLFA-TEDVD----LKKLLNGEDR--DLIGRMKS 385
RL++TGTPL N+L ELWSLL F+MP +F +E+ D + K+ +++ ++I ++ +
Sbjct: 473 -RLLITGTPLHNNLKELWSLLNFLMPKIFDNSEEFDNLFNISKISTNDNKQSEIITQLHT 531
Query: 386 ILGPFILRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDAD 445
IL PF+LRRLK +V Q L PK + +V M + Q+ Y + +K D
Sbjct: 532 ILKPFMLRRLKVEVEQSLPPKREIYIFVGMSKLQKKLYSDIL-----------SKNIDV- 579
Query: 446 LATIVGVLPQRQISNYFVQFRKIANHPLL 474
L + G + Q+ N +Q RK NHP L
Sbjct: 580 LNAMTG--SKNQMLNILMQLRKCCNHPYL 606
>DICTYBASE|DDB_G0284171 [details] [associations]
symbol:DDB_G0284171 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 dictyBase:DDB_G0284171
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006357 EMBL:AAFI02000063 GO:GO:0004003 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR025260 Pfam:PF13907
KO:K11367 RefSeq:XP_638708.1 ProteinModelPortal:Q54Q16
STRING:Q54Q16 EnsemblProtists:DDB0220640 GeneID:8624452
KEGG:ddi:DDB_G0284171 InParanoid:Q54Q16 OMA:DINATEF
ProtClustDB:CLSZ2732060 Uniprot:Q54Q16
Length = 1917
Score = 410 (149.4 bits), Expect = 8.1e-38, Sum P(2) = 8.1e-38
Identities = 101/287 (35%), Positives = 159/287 (55%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQ+ G+N+L+ + ILADEMGLGKTIQ I++L L + + GP L+V P
Sbjct: 755 LRDYQMEGLNWLVHSWMNN-TNVILADEMGLGKTIQTISFLSYLFNEQDIKGPFLVVVPL 813
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTA-YSR--ELSSLAKAGLPP-PFNVLLVCYSLF 283
S +ENW+RE KW P+ +V+ Y G G++ R E + + G FNVLL Y
Sbjct: 814 STIENWQREFAKWAPAMNVIVYTGTGQSRDIIRLYEFYTTNRLGKKKLNFNVLLTTYDFI 873
Query: 284 ERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQ 343
+ D+ L +W + +DEAH LK+ S + L N RL++TGTPLQ
Sbjct: 874 LK-------DKNTLGTIKWEFLAVDEAHRLKNSESVLHEVLKLY--NTTNRLLVTGTPLQ 924
Query: 344 NDLHELWSLLEFMMPDLFATEDVDLKKLLNG-EDRDLIGRMKSILGPFILRRLKSDVMQQ 402
N L ELW+LL F+MP+ F T D + + ++ D I ++ S+L P +LRR+K DV +
Sbjct: 925 NSLKELWNLLNFLMPNKF-TSLKDFQDQYSDLKENDQIAQLHSVLKPHLLRRIKKDVEKS 983
Query: 403 LVPKIQWVEYVTMERPQEDAYR-VAIEEYRAVSRARIAKLSDADLAT 448
L PK + + V + Q+ Y+ + + ++ +++ + K + ++ T
Sbjct: 984 LPPKTERILRVDLSNVQKKYYKWILTKNFQELNKGKGEKTTLLNIMT 1030
Score = 222 (83.2 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 66/223 (29%), Positives = 114/223 (51%)
Query: 293 DRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSL 352
D+ L +W + +DEAH LK+ S + L N RL++TGTPLQN L ELW+L
Sbjct: 876 DKNTLGTIKWEFLAVDEAHRLKNSESVLHEVLKLY--NTTNRLLVTGTPLQNSLKELWNL 933
Query: 353 LEFMMPDLFATEDVDLKKLLNG-EDRDLIGRMKSILGPFILRRLKSDVMQQLVPKIQWVE 411
L F+MP+ F T D + + ++ D I ++ S+L P +LRR+K DV + L PK + +
Sbjct: 934 LNFLMPNKF-TSLKDFQDQYSDLKENDQIAQLHSVLKPHLLRRIKKDVEKSLPPKTERIL 992
Query: 412 YVTMERPQEDAYR-VAIEEYRAVSRARIAKLSDADLATIVGVLPQRQISNYFVQFRKIAN 470
V + Q+ Y+ + + ++ +++ + K T++ ++ + +K N
Sbjct: 993 RVDLSNVQKKYYKWILTKNFQELNKGKGEK------TTLLNIM---------TELKKTCN 1037
Query: 471 HPLLVRRIYSDDDVVRFAKKL--HPMGAFGFECTLERVIEELK 511
HP L + + D+ AK L + A G L++++ LK
Sbjct: 1038 HPYLYQN--ARDECELGAKDLLDSMIRASGKLVLLDKLLIRLK 1078
Score = 42 (19.8 bits), Expect = 8.1e-38, Sum P(2) = 8.1e-38
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 148 VTQSDIDDACGDEDSDFQP 166
+T S+ D + DSD++P
Sbjct: 355 ITYSESDSEESESDSDYEP 373
>TAIR|locus:2041644 [details] [associations]
symbol:CHR5 "chromatin remodeling 5" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0004386 "helicase
activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0009506 GO:GO:0005524 GO:GO:0005634
EMBL:CP002685 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR025260 Pfam:PF13907 KO:K11367
IPI:IPI00521189 RefSeq:NP_178970.3 UniGene:At.40665 PRIDE:F4IV99
EnsemblPlants:AT2G13370.1 GeneID:815823 KEGG:ath:AT2G13370
OMA:ARNTKSY Uniprot:F4IV99
Length = 1724
Score = 410 (149.4 bits), Expect = 1.6e-37, Sum P(2) = 1.6e-37
Identities = 115/342 (33%), Positives = 173/342 (50%)
Query: 105 GDFV-EALQKCAKIS-AEL--KRELYGTTTSAACDRYAEVEASSV---RIVTQSDIDDAC 157
GD V E L K +S AE ++++ A D Y E S ++V Q
Sbjct: 549 GDVVPEYLVKWQGLSYAEATWEKDVDIAFAQVAIDEYKAREVSIAVQGKMVEQQRTKGKA 608
Query: 158 GDEDSDFQP------VLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLL 211
D QP L+ YQL G+NFL+ + ILADEMGLGKT+Q+++ L L
Sbjct: 609 SLRKLDEQPEWLIGGTLRDYQLEGLNFLVNSWLND-TNVILADEMGLGKTVQSVSMLGFL 667
Query: 212 KHLNNDPGPHLIVCPASVLENWERELKKWCPSFSVLQYHG--AGRTAYSR-ELSSLAKAG 268
++ PGP L+V P S L NW +E +KW P +++ Y G A R + E + K G
Sbjct: 668 QNTQQIPGPFLVVVPLSTLANWAKEFRKWLPGMNIIVYVGTRASREVCQQYEFYNEKKVG 727
Query: 269 LPPPFNVLLVCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVA 328
P FN LL Y + + D+ +L + +W +++DEAH LK+ + + L+ +
Sbjct: 728 RPIKFNALLTTYEVVLK-------DKAVLSKIKWIYLMVDEAHRLKNSEAQLYTALLEFS 780
Query: 329 RNANQRLMLTGTPLQNDLHELWSLLEFMMPDLFATED--VDLKKLLNGEDRDLIGRMKSI 386
+L++TGTPLQN + ELW+LL F+ P F +D V+ K L+ + + +
Sbjct: 781 --TKNKLLITGTPLQNSVEELWALLHFLDPGKFKNKDEFVENYKNLSSFNESELANLHLE 838
Query: 387 LGPFILRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIE 428
L P ILRR+ DV + L PKI+ + V M Q+ Y+ +E
Sbjct: 839 LRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILE 880
Score = 210 (79.0 bits), Expect = 6.0e-12, Sum P(2) = 6.0e-12
Identities = 60/196 (30%), Positives = 98/196 (50%)
Query: 281 SLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGT 340
+L + V KD + +L + +W +++DEAH LK+ + + L+ + +L++TGT
Sbjct: 734 ALLTTYEVVLKD-KAVLSKIKWIYLMVDEAHRLKNSEAQLYTALLEFS--TKNKLLITGT 790
Query: 341 PLQNDLHELWSLLEFMMPDLFATED--VDLKKLLNGEDRDLIGRMKSILGPFILRRLKSD 398
PLQN + ELW+LL F+ P F +D V+ K L+ + + + L P ILRR+ D
Sbjct: 791 PLQNSVEELWALLHFLDPGKFKNKDEFVENYKNLSSFNESELANLHLELRPHILRRVIKD 850
Query: 399 VMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQI 458
V + L PKI+ + V M Q+ Y+ +E D + + G Q +
Sbjct: 851 VEKSLPPKIERILRVEMSPLQKQYYKWILER----------NFHDLNKG-VRG--NQVSL 897
Query: 459 SNYFVQFRKIANHPLL 474
N V+ +K NHP L
Sbjct: 898 LNIVVELKKCCNHPFL 913
Score = 38 (18.4 bits), Expect = 1.6e-37, Sum P(2) = 1.6e-37
Identities = 7/21 (33%), Positives = 10/21 (47%)
Query: 451 GVLPQRQISNYFVQFRKIANH 471
G LP+R ++ K NH
Sbjct: 1266 GNLPKRDAQRFYRTVMKFGNH 1286
Score = 38 (18.4 bits), Expect = 6.0e-12, Sum P(2) = 6.0e-12
Identities = 17/75 (22%), Positives = 30/75 (40%)
Query: 109 EALQKCAKI-SAELKRELYGTTTSAACDRYAEVE-------ASSVRIVTQSDIDDACGDE 160
E Q A S+ L ++ GT + D +V+ S+R ++ +D+
Sbjct: 21 EERQNAATFQSSPLNEDVDGTYSERGFDMNMDVQYQSDPEPGCSIRQPNETAVDNVADPV 80
Query: 161 DSDFQPVLKPYQLVG 175
DS +Q K + G
Sbjct: 81 DSHYQSSTKRLGVTG 95
>TAIR|locus:2116747 [details] [associations]
symbol:PKR2 "PICKLE RELATED 2" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 EMBL:CP002687
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI00523018 RefSeq:NP_194918.2 UniGene:At.54572
ProteinModelPortal:F4JTF6 SMR:F4JTF6 PRIDE:F4JTF6
EnsemblPlants:AT4G31900.1 GeneID:829320 KEGG:ath:AT4G31900
OMA:SYWESES ArrayExpress:F4JTF6 Uniprot:F4JTF6
Length = 1202
Score = 402 (146.6 bits), Expect = 1.7e-37, Sum P(2) = 1.7e-37
Identities = 100/279 (35%), Positives = 150/279 (53%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L YQL G+NFL + K ILADEMGLGKTIQ+I +L L + PHL+V P
Sbjct: 225 LHTYQLEGLNFLRYSWSKK-TNVILADEMGLGKTIQSIAFLASL--FEENLSPHLVVAPL 281
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTA-YSRELSSLAKAGLPPPFNVLLVCYSLFERH 286
S + NWERE W P +V+ Y G E G F+VLL Y + H
Sbjct: 282 STIRNWEREFATWAPHMNVVMYTGDSEARDVIWEHEFYFSEGRKSKFDVLLTTYEMV--H 339
Query: 287 SVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDL 346
+L +W+C+++DE H LK++ S + +L + ++LTGTPLQN+L
Sbjct: 340 P-----GISVLSPIKWTCMIIDEGHRLKNQKSKLYSSLSQFT--SKHIVLLTGTPLQNNL 392
Query: 347 HELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFILRRLKSDVMQQLVP- 405
+EL++L+ F+ D F + L+K + + I R+ +L P +LRRLK DV++ VP
Sbjct: 393 NELFALMHFLDADKFGS----LEKFQDINKEEQISRLHQMLAPHLLRRLKKDVLKDKVPP 448
Query: 406 KIQWVEYVTMERPQEDAYRVAI-EEYRAVSRARIAKLSD 443
K + + V M Q++ Y+ I Y+ +++ R AK+S+
Sbjct: 449 KKELILRVDMSSQQKEVYKAVITNNYQVLTKKRDAKISN 487
Score = 41 (19.5 bits), Expect = 1.7e-37, Sum P(2) = 1.7e-37
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 7 EISEISDEEWEP 18
EI +I D EW P
Sbjct: 46 EIEKILDREWRP 57
>GENEDB_PFALCIPARUM|PFB0730w [details] [associations]
symbol:PFB0730w "DNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0003678 "DNA helicase
activity" evidence=ISS] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0016514 "SWI/SNF complex" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
GO:GO:0006338 GO:GO:0016514 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 KO:K11647 EMBL:AE001362 OMA:NENMNMS
PIR:F71607 RefSeq:XP_001349665.1 ProteinModelPortal:O96239
EnsemblProtists:PFB0730w:mRNA GeneID:812747 KEGG:pfa:PFB0730w
EuPathDB:PlasmoDB:PF3D7_0216000 Uniprot:O96239
Length = 1997
Score = 405 (147.6 bits), Expect = 2.4e-37, Sum P(2) = 2.4e-37
Identities = 111/340 (32%), Positives = 182/340 (53%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPG-PHLIVCP 226
L YQL G+ +L+ LY + G ILADEMGLGKTIQ I+ LK N+ +LI+ P
Sbjct: 884 LMKYQLEGLEWLVSLYNNNLHG-ILADEMGLGKTIQTISLFAYLKEFKNNINVKNLIIVP 942
Query: 227 ASVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERH 286
S L NW E +WCPS +V+ Y G E +AK L F++ + + L
Sbjct: 943 LSTLPNWISEFNRWCPSLNVITYRGN-----KLERKHIAKKLLEQTFDICITTFDLV--- 994
Query: 287 SVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDL 346
+++K L + W+ +++DE H +K+ S R+ +S ++ R++LTGTPLQN+L
Sbjct: 995 -IKEKS---FLMKISWNYIVVDEGHRMKNNKS-RFHVFLSEFKS-KYRILLTGTPLQNNL 1048
Query: 347 HELWSLLEFMMPDLFAT-EDVD---LKKLLNGED-------RD---LIGRMKSILGPFIL 392
ELWSLL F++P +F++ D + +K L N +D + +I R+ S+L PF+L
Sbjct: 1049 SELWSLLNFLLPKIFSSCVDFEKWFVKSLHNEKDVYEHITEEEQLLIINRLHSVLLPFML 1108
Query: 393 RRLKSDVMQQLVPKIQWVEYVTMERPQEDAYR-VAIEEYRAVSRARIAKLSDADLATIVG 451
RR+K DV++ L K ++ ++ + Q+ Y+ + + ++ V+ G
Sbjct: 1109 RRVKKDVLKSLPKKYEYNIHIELSLYQKILYKQIQTKGFKQVNHN--------------G 1154
Query: 452 VLPQRQISNYFVQFRKIANHPLLVRRIYS-DDDVVRFAKK 490
+ + N +Q RKI NHP L Y+ D+++++ + K
Sbjct: 1155 SITTKIFQNIVMQLRKIVNHPYLFLYDYNIDENIIKCSGK 1194
Score = 43 (20.2 bits), Expect = 2.4e-37, Sum P(2) = 2.4e-37
Identities = 11/46 (23%), Positives = 23/46 (50%)
Query: 467 KIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFECTLERVIEELKN 512
K++N L+ +R + DD+ +K+ EC ++ +I+ N
Sbjct: 1673 KVSNERLIFKRKHDTDDLQCEDEKIKE----NEECDVDNIIQNKNN 1714
>UNIPROTKB|O96239 [details] [associations]
symbol:PFB0730w "DEAD/DEAH box helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003678 "DNA helicase
activity" evidence=ISS] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0016514 "SWI/SNF complex" evidence=ISS]
[GO:0032508 "DNA duplex unwinding" evidence=ISS] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0006338
GO:GO:0016514 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0003678 KO:K11647 EMBL:AE001362 OMA:NENMNMS PIR:F71607
RefSeq:XP_001349665.1 ProteinModelPortal:O96239
EnsemblProtists:PFB0730w:mRNA GeneID:812747 KEGG:pfa:PFB0730w
EuPathDB:PlasmoDB:PF3D7_0216000 Uniprot:O96239
Length = 1997
Score = 405 (147.6 bits), Expect = 2.4e-37, Sum P(2) = 2.4e-37
Identities = 111/340 (32%), Positives = 182/340 (53%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPG-PHLIVCP 226
L YQL G+ +L+ LY + G ILADEMGLGKTIQ I+ LK N+ +LI+ P
Sbjct: 884 LMKYQLEGLEWLVSLYNNNLHG-ILADEMGLGKTIQTISLFAYLKEFKNNINVKNLIIVP 942
Query: 227 ASVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERH 286
S L NW E +WCPS +V+ Y G E +AK L F++ + + L
Sbjct: 943 LSTLPNWISEFNRWCPSLNVITYRGN-----KLERKHIAKKLLEQTFDICITTFDLV--- 994
Query: 287 SVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDL 346
+++K L + W+ +++DE H +K+ S R+ +S ++ R++LTGTPLQN+L
Sbjct: 995 -IKEKS---FLMKISWNYIVVDEGHRMKNNKS-RFHVFLSEFKS-KYRILLTGTPLQNNL 1048
Query: 347 HELWSLLEFMMPDLFAT-EDVD---LKKLLNGED-------RD---LIGRMKSILGPFIL 392
ELWSLL F++P +F++ D + +K L N +D + +I R+ S+L PF+L
Sbjct: 1049 SELWSLLNFLLPKIFSSCVDFEKWFVKSLHNEKDVYEHITEEEQLLIINRLHSVLLPFML 1108
Query: 393 RRLKSDVMQQLVPKIQWVEYVTMERPQEDAYR-VAIEEYRAVSRARIAKLSDADLATIVG 451
RR+K DV++ L K ++ ++ + Q+ Y+ + + ++ V+ G
Sbjct: 1109 RRVKKDVLKSLPKKYEYNIHIELSLYQKILYKQIQTKGFKQVNHN--------------G 1154
Query: 452 VLPQRQISNYFVQFRKIANHPLLVRRIYS-DDDVVRFAKK 490
+ + N +Q RKI NHP L Y+ D+++++ + K
Sbjct: 1155 SITTKIFQNIVMQLRKIVNHPYLFLYDYNIDENIIKCSGK 1194
Score = 43 (20.2 bits), Expect = 2.4e-37, Sum P(2) = 2.4e-37
Identities = 11/46 (23%), Positives = 23/46 (50%)
Query: 467 KIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFECTLERVIEELKN 512
K++N L+ +R + DD+ +K+ EC ++ +I+ N
Sbjct: 1673 KVSNERLIFKRKHDTDDLQCEDEKIKE----NEECDVDNIIQNKNN 1714
>UNIPROTKB|F1Q2U2 [details] [associations]
symbol:CHD1L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589
PROSITE:PS51154 GO:GO:0008026 OMA:TCQTIAL
GeneTree:ENSGT00670000098110 EMBL:AAEX03011032
Ensembl:ENSCAFT00000017488 Uniprot:F1Q2U2
Length = 898
Score = 393 (143.4 bits), Expect = 3.6e-37, Sum P(2) = 3.6e-37
Identities = 102/276 (36%), Positives = 150/276 (54%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQL GVN+L + G IL DEMGLGKT Q I + L ND GP LI+CP
Sbjct: 48 LRSYQLEGVNWLARCFHCQ-NGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLILCPL 106
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
SVL NW E++++ P S + Y G + +R L + F+VLL Y + +
Sbjct: 107 SVLSNWTEEMERFAPGLSCVMYAG-DKEERARLQQDLKQESR---FHVLLTTYEICLK-- 160
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
D LK + WS +++DEAH LK++NS K L+ + + L+LTGTP+QN L
Sbjct: 161 -----DSSFLKSFPWSVLVVDEAHRLKNQNSLLHKTLLEFSVVFS--LLLTGTPIQNSLQ 213
Query: 348 ELWSLLEFMMPDLFATEDVD--LKKLLNGE-DRDLIGRMKSILGPFILRRLKSDVMQQLV 404
EL+SLL F+ PDLF E V +++ + E + D + +L PF+LRR+K++V +L
Sbjct: 214 ELYSLLSFVEPDLFPKEQVGDFVQRYQDIEKESDSASELHKLLQPFLLRRVKAEVATELP 273
Query: 405 PKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAK 440
K + V Y M Q+ Y+ + + + +AK
Sbjct: 274 KKTEVVLYHGMSALQKKYYKAILMKDLDAFESEMAK 309
Score = 225 (84.3 bits), Expect = 9.3e-15, Sum P(2) = 9.3e-15
Identities = 62/185 (33%), Positives = 98/185 (52%)
Query: 293 DRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSL 352
D LK + WS +++DEAH LK++NS K L+ + + L+LTGTP+QN L EL+SL
Sbjct: 161 DSSFLKSFPWSVLVVDEAHRLKNQNSLLHKTLLEFSVVFS--LLLTGTPIQNSLQELYSL 218
Query: 353 LEFMMPDLFATEDVD--LKKLLNGE-DRDLIGRMKSILGPFILRRLKSDVMQQLVPKIQW 409
L F+ PDLF E V +++ + E + D + +L PF+LRR+K++V +L K +
Sbjct: 219 LSFVEPDLFPKEQVGDFVQRYQDIEKESDSASELHKLLQPFLLRRVKAEVATELPKKTEV 278
Query: 410 VEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQISNYFVQFRKIA 469
V Y M Q+ Y+ + + + +AK + ++ N Q RK
Sbjct: 279 VLYHGMSALQKKYYKAILMKDLDAFESEMAK--------------KVKLQNVLSQLRKCV 324
Query: 470 NHPLL 474
+HP L
Sbjct: 325 DHPYL 329
Score = 42 (19.8 bits), Expect = 3.6e-37, Sum P(2) = 3.6e-37
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 483 DVVRFA--KKLHPMGAFGFECTLERVIEELKN 512
++++F K L G+ E LER++ E KN
Sbjct: 517 EILKFGLDKLLSSQGSTMDEIDLERILGETKN 548
>CGD|CAL0001390 [details] [associations]
symbol:orf19.3035 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0031934 "mating-type region
heterochromatin" evidence=IEA] [GO:0046695 "SLIK (SAGA-like)
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0030874 "nucleolar chromatin" evidence=IEA] [GO:2000616
"negative regulation of histone H3-K9 acetylation" evidence=IEA]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IEA] [GO:0071441 "negative regulation of histone H3-K14
acetylation" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0006368 "transcription elongation
from RNA polymerase II promoter" evidence=IEA] [GO:0000070 "mitotic
sister chromatid segregation" evidence=IEA] [GO:0060303 "regulation
of nucleosome density" evidence=IEA] [GO:0006200 "ATP catabolic
process" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:2000104 "negative regulation of
DNA-dependent DNA replication" evidence=IEA] [GO:0042766
"nucleosome mobilization" evidence=IEA] [GO:0001178 "regulation of
transcriptional start site selection at RNA polymerase II promoter"
evidence=IEA] [GO:0006363 "termination of RNA polymerase I
transcription" evidence=IEA] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IEA] [GO:0000182 "rDNA
binding" evidence=IEA] [GO:0031490 "chromatin DNA binding"
evidence=IEA] [GO:0035064 "methylated histone residue binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 CGD:CAL0001390
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 EMBL:AACQ01000017
EMBL:AACQ01000015 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907 KO:K11367
RefSeq:XP_721262.1 RefSeq:XP_721533.1 ProteinModelPortal:Q5AI17
STRING:Q5AI17 GeneID:3636889 GeneID:3637077 KEGG:cal:CaO19.10553
KEGG:cal:CaO19.3035 Uniprot:Q5AI17
Length = 1410
Score = 390 (142.3 bits), Expect = 4.5e-37, Sum P(3) = 4.5e-37
Identities = 96/296 (32%), Positives = 154/296 (52%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ +QL G+N++ L+ + G ILADEMGLGKT+Q + +L L + GPHL+V P
Sbjct: 362 LRDFQLTGLNWMAFLWSRNENG-ILADEMGLGKTVQTVAFLSWLIYARRQNGPHLVVVPL 420
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
S + W+ +KW P + + Y G G + L P FNVLL Y +
Sbjct: 421 STVPAWQETFEKWAPDVNCVYYLGNGEARKTIREYELYNQNRKPKFNVLLTTYEYILK-- 478
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
D+ L ++W + +DEAH LK+ S ++ L + RL++TGTPLQN++
Sbjct: 479 -----DKNELGAFKWQFLAVDEAHRLKNAESSLYEALKGF--KVSNRLLITGTPLQNNVK 531
Query: 348 ELWSLLEFMMPDLFATE-DVDLKKLLNGEDRDLIGRMKSILGPFILRRLKSDVMQQLVPK 406
EL +L F+MP F + ++D + + + E I ++ + PFILRRLK DV + L K
Sbjct: 532 ELAALCNFLMPGKFTIDQEIDFETI-DSEQEQYIKDLQKKISPFILRRLKKDVEKSLPSK 590
Query: 407 IQWVEYVTMERPQEDAYR-VAIEEYRAVSRARIAKLSDADLATIVGVLPQRQISNY 461
+ + V + Q + Y+ + + Y A++ + S L I+ L ++ SN+
Sbjct: 591 SERILRVELSDIQTEYYKNIITKNYAALNAGN--RGSQISLLNIMSEL--KKASNH 642
Score = 201 (75.8 bits), Expect = 1.5e-10, Sum P(3) = 1.5e-10
Identities = 55/183 (30%), Positives = 94/183 (51%)
Query: 293 DRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSL 352
D+ L ++W + +DEAH LK+ S ++ L + RL++TGTPLQN++ EL +L
Sbjct: 479 DKNELGAFKWQFLAVDEAHRLKNAESSLYEALKGF--KVSNRLLITGTPLQNNVKELAAL 536
Query: 353 LEFMMPDLFATE-DVDLKKLLNGEDRDLIGRMKSILGPFILRRLKSDVMQQLVPKIQWVE 411
F+MP F + ++D + + + E I ++ + PFILRRLK DV + L K + +
Sbjct: 537 CNFLMPGKFTIDQEIDFETI-DSEQEQYIKDLQKKISPFILRRLKKDVEKSLPSKSERIL 595
Query: 412 YVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQISNYFVQFRKIANH 471
V + D + E Y+ + A L+ + + + +L N + +K +NH
Sbjct: 596 RVELS----D---IQTEYYKNIITKNYAALNAGNRGSQISLL------NIMSELKKASNH 642
Query: 472 PLL 474
P L
Sbjct: 643 PYL 645
Score = 38 (18.4 bits), Expect = 4.5e-37, Sum P(3) = 4.5e-37
Identities = 9/37 (24%), Positives = 15/37 (40%)
Query: 468 IANHPL---LVRRIYSDDDVVRFAKKLHPMGAFGFEC 501
+ N P+ L+ +I + D F HP + C
Sbjct: 1100 VLNRPVDMKLLEKIVTKTDSTNFVLPRHPKSVQAWSC 1136
Score = 37 (18.1 bits), Expect = 4.5e-37, Sum P(3) = 4.5e-37
Identities = 17/55 (30%), Positives = 21/55 (38%)
Query: 119 AELKRELYGTTTS---------AACDRYAEVEASSVRIVTQSDIDDACG-DEDSD 163
AEL ELYG S D +V S + Q D +D DED +
Sbjct: 10 AELNPELYGLRRSHRERRGPAIVESDSEEDVAPSRKKKKVQDDYEDGISMDEDEN 64
>RGD|1302988 [details] [associations]
symbol:Smarca2 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 2"
species:10116 "Rattus norvegicus" [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0016514 "SWI/SNF complex"
evidence=ISO] [GO:0030308 "negative regulation of cell growth"
evidence=ISO] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=ISO] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=ISO] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0045111 "intermediate filament cytoskeleton" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0071564 "npBAF complex" evidence=ISO] [GO:0071565 "nBAF
complex" evidence=ISO] [GO:0071778 "WINAC complex" evidence=ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636
OrthoDB:EOG418BMJ IPI:IPI00464435 EMBL:AY643746
RefSeq:NP_001004446.1 UniGene:Rn.94939 ProteinModelPortal:Q6DUH4
SMR:Q6DUH4 STRING:Q6DUH4 GeneID:361745 KEGG:rno:361745
UCSC:RGD:1302988 InParanoid:Q6DUH4 NextBio:677480
Genevestigator:Q6DUH4 Uniprot:Q6DUH4
Length = 1597
Score = 412 (150.1 bits), Expect = 5.0e-37, P = 5.0e-37
Identities = 118/327 (36%), Positives = 168/327 (51%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAI---TYLMLLKHLNNDPGPHLIV 224
LK YQL G+ +++ LY + G ILADEMG GKTIQ I TYLM K LN GP+LI+
Sbjct: 731 LKHYQLQGLEWMVSLYNNNLNG-ILADEMGPGKTIQTIALITYLMEHKGLN---GPYLII 786
Query: 225 CPASVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFE 284
P S L NW E KW PS + Y G A R L ++G FN LL Y
Sbjct: 787 VPLSTLSNWTYEFDKWAPSAVKISYKGT--PAMRRSLVPQLRSG---KFNALLTTYEYII 841
Query: 285 RHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQN 344
+ D+ IL + RW +++DE H +K+ + + +++ A +R++LTGTPLQN
Sbjct: 842 K-------DKHILAKIRWKYMIVDEGHRMKNHHC-KLTQVLNTHYVAPRRILLTGTPLQN 893
Query: 345 DLHELWSLLEFMMPDLFAT-----EDVDLKKLLNGEDRDL--------IGRMKSILGPFI 391
L ELW+LL F++P +F + + + + GE DL I R+ +L PF+
Sbjct: 894 KLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFL 953
Query: 392 LRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVG 451
LRRLK +V QL K+++V M Q+ YR +A+ L+D G
Sbjct: 954 LRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHM--------QAKGILLTDGSEKDKKG 1005
Query: 452 VLPQRQISNYFVQFRKIANHPLLVRRI 478
+ + N +Q RKI NHP + + I
Sbjct: 1006 KGGAKTLMNTIMQLRKICNHPYMFQHI 1032
>ZFIN|ZDB-GENE-030131-9923 [details] [associations]
symbol:hells "helicase, lymphoid-specific"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000775
"chromosome, centromeric region" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0045132 "meiotic chromosome segregation"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR011515 Pfam:PF00176 Pfam:PF00271
Pfam:PF07557 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-030131-9923 GO:GO:0005524 GO:GO:0005634 GO:GO:0000775
GO:GO:0003677 GO:GO:0004386 GO:GO:0045132 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 CTD:3070 HOVERGEN:HBG060049
EMBL:AY612850 IPI:IPI00817585 RefSeq:NP_001032178.1
UniGene:Dr.75180 ProteinModelPortal:Q3BDS6 STRING:Q3BDS6
GeneID:553328 KEGG:dre:553328 InParanoid:Q3BDS6 NextBio:20880094
ArrayExpress:Q3BDS6 Uniprot:Q3BDS6
Length = 853
Score = 406 (148.0 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 102/274 (37%), Positives = 156/274 (56%)
Query: 167 VLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCP 226
V++ YQ+ G+ +L +L+ GI G ILADEMGLGKTIQ I ++ ++ GP L+V P
Sbjct: 232 VMRWYQVEGIEWLRMLWENGING-ILADEMGLGKTIQCIAHIAMMVE-KKVLGPFLVVAP 289
Query: 227 ASVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERH 286
S L NW E K++ P SVL YHG +E L K + L +C +
Sbjct: 290 LSTLPNWISEFKRFTPEVSVLLYHGP-----QKERLDLVKK-IRQHQGSLRMCPVVVTSF 343
Query: 287 SVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDL 346
+ +D RK L+R+ W+ +++DE H +K+ N + L + + +L+LTGTPLQN+L
Sbjct: 344 EIAMRD-RKFLQRFHWNYLIVDEGHRIKNLNCRLVQELKMLP--TDNKLLLTGTPLQNNL 400
Query: 347 HELWSLLEFMMPDLF------------ATEDVDLKKLL-NGEDRDLIGRMKSILGPFILR 393
ELWSLL F++PD+F +T D + ++ N +++++ + IL PF+LR
Sbjct: 401 SELWSLLNFLLPDVFDDLKSFESWFDISTITSDAENIVANEREQNILHMLHLILTPFLLR 460
Query: 394 RLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAI 427
RLKSDV ++ PK + V Y + QE A+ +AI
Sbjct: 461 RLKSDVTLEVPPKKEIVVYAPLTNKQE-AFYMAI 493
>SGD|S000005816 [details] [associations]
symbol:SNF2 "Catalytic subunit of the SWI/SNF chromatin
remodeling complex" species:4932 "Saccharomyces cerevisiae"
[GO:0006261 "DNA-dependent DNA replication" evidence=IMP]
[GO:0016514 "SWI/SNF complex" evidence=IDA;IMP] [GO:0006338
"chromatin remodeling" evidence=IGI;IMP] [GO:0031496 "positive
regulation of mating type switching" evidence=IMP] [GO:0031492
"nucleosomal DNA binding" evidence=IDA] [GO:0042766 "nucleosome
mobilization" evidence=IMP;IDA] [GO:0006302 "double-strand break
repair" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IMP;IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IMP] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IMP;IDA]
[GO:0044109 "cellular alcohol catabolic process" evidence=IMP]
[GO:0005987 "sucrose catabolic process" evidence=IMP] [GO:0070577
"histone acetyl-lysine binding" evidence=IMP;IDA] [GO:0042148
"strand invasion" evidence=IMP] [GO:0061412 "positive regulation of
transcription from RNA polymerase II promoter in response to amino
acid starvation" evidence=IMP] [GO:0001102 "RNA polymerase II
activating transcription factor binding" evidence=IPI]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00384 SMART:SM00490
SMART:SM00951 SGD:S000005816 GO:GO:0005524 EMBL:BK006948
GO:GO:0006351 GO:GO:0006261 GO:GO:0016514 GO:GO:0006302
GO:GO:0004386 GO:GO:0005987 GO:GO:0042766 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0070577
InterPro:IPR018359 GeneTree:ENSGT00550000074659 InterPro:IPR014012
PROSITE:PS51204 EMBL:X89633 GO:GO:0008094 HOGENOM:HOG000172362
GO:GO:0031492 RefSeq:NP_014933.3 GeneID:854465 KEGG:sce:YOR290C
KO:K11786 GO:GO:0061412 GO:GO:0042148 OrthoDB:EOG4D565R EMBL:M61703
EMBL:X57837 EMBL:D90459 EMBL:Z75198 EMBL:Z75199 PIR:S15047
RefSeq:NP_014935.3 ProteinModelPortal:P22082 SMR:P22082
DIP:DIP-1150N IntAct:P22082 MINT:MINT-600461 STRING:P22082
PaxDb:P22082 PeptideAtlas:P22082 EnsemblFungi:YOR290C GeneID:854467
KEGG:sce:YOR292C CYGD:YOR290c OMA:HPNFLSK NextBio:976750
Genevestigator:P22082 GermOnline:YOR290C GO:GO:0044109
GO:GO:0031496 Uniprot:P22082
Length = 1703
Score = 410 (149.4 bits), Expect = 9.1e-37, P = 9.1e-37
Identities = 116/359 (32%), Positives = 193/359 (53%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
LK YQ+ G+ +++ L+ + G ILADEMGLGKTIQ I+ L L + N GP+L++ P
Sbjct: 767 LKDYQIKGLQWMVSLFNNHLNG-ILADEMGLGKTIQTISLLTYLYEMKNIRGPYLVIVPL 825
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
S L NW E KW P+ + + G+ +++ +AG F+V+L + FE +
Sbjct: 826 STLSNWSSEFAKWAPTLRTISFKGSPNERKAKQAK--IRAG---EFDVVL---TTFE-YI 876
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
+++ R +L + +W +++DE H +K+ S + ++ +A+ RL+LTGTPLQN+L
Sbjct: 877 IKE---RALLSKVKWVHMIIDEGHRMKNAQS-KLSLTLNTHYHADYRLILTGTPLQNNLP 932
Query: 348 ELWSLLEFMMPDLF-ATEDVDL---KKLLN--GEDR-DL--------IGRMKSILGPFIL 392
ELW+LL F++P +F + + D N G+D+ +L I R+ +L PF+L
Sbjct: 933 ELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIELSEEETLLVIRRLHKVLRPFLL 992
Query: 393 RRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGV 452
RRLK DV ++L K++ V M Q+ Y+ ++ YR + + D + +VG+
Sbjct: 993 RRLKKDVEKELPDKVEKVVKCKMSALQQIMYQQMLK-YRRLF------IGDQNNKKMVGL 1045
Query: 453 LPQRQISNYFVQFRKIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFECTLERVIEELK 511
R +N +Q +KI NHP + + + R A FE L+R++ +LK
Sbjct: 1046 ---RGFNNQIMQLKKICNHPFVFEEVEDQINPTRETNDDIWRVAGKFEL-LDRILPKLK 1100
>UNIPROTKB|F1P5V4 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0001655 "urogenital system development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005721 "centromeric
heterochromatin" evidence=IEA] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=IEA] [GO:0010216 "maintenance of DNA
methylation" evidence=IEA] [GO:0031508 "centromeric heterochromatin
assembly" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0046651 "lymphocyte
proliferation" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216 OMA:ETFYTAI
GO:GO:0006346 GO:GO:0046651 GeneTree:ENSGT00550000075106
EMBL:AADN02027839 EMBL:AADN02027838 IPI:IPI00823178
Ensembl:ENSGALT00000008749 ArrayExpress:F1P5V4 Uniprot:F1P5V4
Length = 839
Score = 384 (140.2 bits), Expect = 9.2e-37, Sum P(2) = 9.2e-37
Identities = 101/274 (36%), Positives = 150/274 (54%)
Query: 167 VLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCP 226
V++ YQ+ G+ +L +L+ GI G ILADEMGLGKTIQ I + L+ PGP L+ P
Sbjct: 221 VMRWYQVEGMEWLRMLWENGING-ILADEMGLGKTIQCIATIALMVE-RGVPGPFLVCGP 278
Query: 227 ASVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERH 286
S L NW E K++ P ++ YHGA + R+L G + V + FE
Sbjct: 279 LSTLPNWMSEFKRFTPEIPLMLYHGAQQER--RKLVRKIH-GRQGSLKIHPVVITSFE-- 333
Query: 287 SVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDL 346
+ +D R L+ W +++DE H +K+ N + L NA+ +L+LTGTPLQN+L
Sbjct: 334 -IAMRD-RNALQSCFWKYLIVDEGHRIKNMNCRLIRELKRF--NADNKLLLTGTPLQNNL 389
Query: 347 HELWSLLEFMMPDLF----ATED-VDLKKLLN-GED-------RDLIGRMKSILGPFILR 393
ELWSLL F++PD+F + E D+ + ED ++++ + IL PF+LR
Sbjct: 390 AELWSLLNFLLPDVFDDLKSFESWFDITSITETAEDIIAKEKEQNILHMLHQILTPFLLR 449
Query: 394 RLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAI 427
RLKSDV ++ PK + V Y + + QE Y +
Sbjct: 450 RLKSDVALEVPPKREVVVYAPLAKKQETFYTAIV 483
Score = 46 (21.3 bits), Expect = 9.2e-37, Sum P(2) = 9.2e-37
Identities = 16/56 (28%), Positives = 25/56 (44%)
Query: 457 QISNYFVQFRKIANHPLLVRRIYSDDDVVR-FAKKLHPMGAFGFECTLERVIEELK 511
++ N + RK NHP L+ Y D + F + G L+R++ ELK
Sbjct: 559 KLQNIMMLLRKCCNHPYLIE--YPLDPATQQFKVDEDLVKNSGKFLLLDRMLPELK 612
>ZFIN|ZDB-GENE-050419-256 [details] [associations]
symbol:chd2 "chromodomain helicase DNA binding
protein 2" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-050419-256
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 EMBL:BX649578 IPI:IPI00999128
Ensembl:ENSDART00000127730 ArrayExpress:E7F7R2 Bgee:E7F7R2
Uniprot:E7F7R2
Length = 1813
Score = 404 (147.3 bits), Expect = 9.9e-37, Sum P(2) = 9.9e-37
Identities = 103/282 (36%), Positives = 157/282 (55%)
Query: 158 GDEDSDFQPVLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNND 217
GDE+ + L+ YQL GVN+L + + ILADEMGLGKTIQ I++L L H +
Sbjct: 483 GDENLE----LRDYQLDGVNWLAHSWCR-CNSVILADEMGLGKTIQTISFLSYLFHQHQL 537
Query: 218 PGPHLIVCPASVLENWERELKKWCPSFSVLQYHGAGRTAYS-RELSSLAKAGLPPPFNVL 276
GP ++V P S L +W+RE W P +V+ Y G + + R+ + FN L
Sbjct: 538 YGPFIVVVPLSTLTSWQREFDTWAPDMNVVVYLGDVTSRKTIRDYEWINPQTKRIKFNAL 597
Query: 277 LVCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLM 336
L Y + + D+ +L W+ + +DEAH LK+ +S +K L+ +N RL+
Sbjct: 598 LTTYEILLK-------DKGVLGNINWAFLGVDEAHRLKNDDSLLYKTLIDF--RSNHRLL 648
Query: 337 LTGTPLQNDLHELWSLLEFMMPDLFAT-EDVDLKKLLNGEDRDL-IGRMKSILGPFILRR 394
+TGTPLQN L ELWSLL F+M D F + ED + + +G+ RD + +L PF+LRR
Sbjct: 649 ITGTPLQNSLKELWSLLHFLMSDKFESWEDFEDE---HGKGRDNGYQSLHKVLEPFLLRR 705
Query: 395 LKSDVMQQLVPKIQWVEYVTMERPQEDAYR-VAIEEYRAVSR 435
+K DV + L K++ + V M Q+ Y+ + ++A+S+
Sbjct: 706 VKKDVEKSLPAKVEQILRVDMSAQQKQFYKWILTRNFKALSK 747
Score = 238 (88.8 bits), Expect = 6.7e-15, Sum P(2) = 6.7e-15
Identities = 63/188 (33%), Positives = 102/188 (54%)
Query: 293 DRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSL 352
D+ +L W+ + +DEAH LK+ +S +K L+ +N RL++TGTPLQN L ELWSL
Sbjct: 607 DKGVLGNINWAFLGVDEAHRLKNDDSLLYKTLIDF--RSNHRLLITGTPLQNSLKELWSL 664
Query: 353 LEFMMPDLFAT-EDVDLKKLLNGEDRDL-IGRMKSILGPFILRRLKSDVMQQLVPKIQWV 410
L F+M D F + ED + + +G+ RD + +L PF+LRR+K DV + L K++ +
Sbjct: 665 LHFLMSDKFESWEDFEDE---HGKGRDNGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQI 721
Query: 411 EYVTMERPQEDAYR-VAIEEYRAVSRARIAKLSDADLATIVGVLPQRQISNYFVQFRKIA 469
V M Q+ Y+ + ++A+S+ S G L N ++ +K
Sbjct: 722 LRVDMSAQQKQFYKWILTRNFKALSKGTRGSSS--------GFL------NIVMELKKCC 767
Query: 470 NHPLLVRR 477
NH L+++
Sbjct: 768 NHAFLIKQ 775
Score = 37 (18.1 bits), Expect = 9.9e-37, Sum P(2) = 9.9e-37
Identities = 7/12 (58%), Positives = 10/12 (83%)
Query: 504 ERVIEELKNYSD 515
+R+ E LK+YSD
Sbjct: 1503 DRITECLKSYSD 1514
>ZFIN|ZDB-GENE-070912-179 [details] [associations]
symbol:chd7 "chromodomain helicase DNA binding
protein 7" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007368 "determination of left/right symmetry"
evidence=IMP] [GO:0001756 "somitogenesis" evidence=IMP] [GO:0060041
"retina development in camera-type eye" evidence=IMP] [GO:0021602
"cranial nerve morphogenesis" evidence=IMP] [GO:0001947 "heart
looping" evidence=IMP] [GO:0030282 "bone mineralization"
evidence=IMP] [GO:0042472 "inner ear morphogenesis" evidence=IMP]
[GO:0014029 "neural crest formation" evidence=IMP]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 ZFIN:ZDB-GENE-070912-179 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0001756 GO:GO:0042472
GO:GO:0060041 GO:GO:0004386 GO:GO:0001947 GO:GO:0030282
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 GeneTree:ENSGT00560000077077
GO:GO:0021602 EMBL:CR450710 GO:GO:0014029 IPI:IPI00493585
Ensembl:ENSDART00000016208 Ensembl:ENSDART00000135230
Uniprot:F1QGL1
Length = 3140
Score = 411 (149.7 bits), Expect = 1.6e-36, P = 1.6e-36
Identities = 105/330 (31%), Positives = 176/330 (53%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQL GVN+LL + ILADEMGLGKTIQ+IT+L + +L GP L++ P
Sbjct: 1012 LREYQLEGVNWLLFNWYN-TRNCILADEMGLGKTIQSITFLYEI-YLKGIHGPFLVIAPL 1069
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
S + NWERE + W +V+ YHG+ A + + + ++ Y +
Sbjct: 1070 STIPNWEREFRTWT-ELNVVVYHGS--QASRKTIQAYEMYYRDTQGRIIKGAYKFHAVIT 1126
Query: 288 VQQK--DDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
+ D L+ W CV++DEAH LK++N + L + + +++LTGTPLQN
Sbjct: 1127 TFEMILTDCPELRNVPWRCVIIDEAHRLKNRNCKLLEGLKMM--DMEHKVLLTGTPLQNT 1184
Query: 346 LHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFILRRLKSDVMQQLVP 405
+ EL+SLL F+ PD F +E +++ + + + + +++ IL P +LRRLK DV + L P
Sbjct: 1185 VEELFSLLNFLEPDRFPSESTFMQEFGDLKTEEQVQKLQGILKPMMLRRLKEDVEKNLAP 1244
Query: 406 KIQWVEYVTMERPQEDAYRVAIEE-YRAVSRARIAKLSDADLATIVGVLPQRQISNYFVQ 464
K + + V + Q+ YR +E+ + +S++ S + V P + N ++
Sbjct: 1245 KEETIIEVELTNVQKKYYRAILEKNFAFLSKSGAGGGSGGGGGSNV---PN--LLNTMME 1299
Query: 465 FRKIANHPLLVRRIYSDDDVVRFAKKLHPM 494
RK NHP L+ +++ ++ ++ HP+
Sbjct: 1300 LRKCCNHPYLING--AEEKIMEEFRETHPL 1327
>UNIPROTKB|Q8TD26 [details] [associations]
symbol:CHD6 "Chromodomain-helicase-DNA-binding protein 6"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006338 "chromatin remodeling" evidence=NAS]
[GO:0007399 "nervous system development" evidence=NAS] [GO:0003682
"chromatin binding" evidence=NAS] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00717 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0007399 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0006338
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 PROSITE:PS00598 CleanEx:HS_CHD5 EMBL:AY034072
EMBL:AL121674 EMBL:AL031669 EMBL:AL031667 EMBL:BC021907
EMBL:BC039860 EMBL:BC040016 EMBL:AF525085 EMBL:AB037756
EMBL:AK026022 IPI:IPI00220289 IPI:IPI00395823 IPI:IPI00513717
RefSeq:NP_115597.3 UniGene:Hs.740645 UniGene:Hs.741381 PDB:2EPB
PDBsum:2EPB ProteinModelPortal:Q8TD26 SMR:Q8TD26 IntAct:Q8TD26
MINT:MINT-1197235 STRING:Q8TD26 PhosphoSite:Q8TD26 DMDM:296439466
PaxDb:Q8TD26 PRIDE:Q8TD26 Ensembl:ENST00000373222
Ensembl:ENST00000373233 Ensembl:ENST00000440647 GeneID:84181
KEGG:hsa:84181 UCSC:uc002xka.1 UCSC:uc002xkc.3 CTD:84181
GeneCards:GC20M040030 H-InvDB:HIX0015824 H-InvDB:HIX0027712
HGNC:HGNC:19057 neXtProt:NX_Q8TD26 PharmGKB:PA134974700
HOVERGEN:HBG081150 InParanoid:Q8TD26 KO:K14436 OMA:CKWATME
OrthoDB:EOG4NP72J PhylomeDB:Q8TD26 ChiTaRS:CHD6
EvolutionaryTrace:Q8TD26 GenomeRNAi:84181 NextBio:73559
ArrayExpress:Q8TD26 Bgee:Q8TD26 CleanEx:HS_CHD6
Genevestigator:Q8TD26 GermOnline:ENSG00000124177 Uniprot:Q8TD26
Length = 2715
Score = 406 (148.0 bits), Expect = 1.8e-36, Sum P(2) = 1.8e-36
Identities = 110/343 (32%), Positives = 185/343 (53%)
Query: 168 LKPYQLVGVNFLLL-LYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCP 226
L+ YQL G+N+LL Y + ILADEMGLGKTIQ+IT+L + L GP LI+ P
Sbjct: 461 LREYQLEGMNWLLFNWYNR--KNCILADEMGLGKTIQSITFLSEI-FLRGIHGPFLIIAP 517
Query: 227 ASVLENWERELKKWCPSFSVLQYHGAGRTAYS-RELSSLAKAGLPPPFNVLLVCYSLFER 285
S + NWERE + W + + YHG+ + ++ + + P + + + +
Sbjct: 518 LSTITNWEREFRTWT-EMNAIVYHGSQISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITT 576
Query: 286 HSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
+ D + LK+ WSCV++DEAH LK++N + L +A +++LTGTPLQN
Sbjct: 577 FEMILADCPE-LKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMA--LEHKVLLTGTPLQNS 633
Query: 346 LHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFILRRLKSDVMQQLVP 405
+ EL+SLL F+ P F +E L++ + + + + +++SIL P +LRRLK DV + L P
Sbjct: 634 VEELFSLLNFLEPSQFPSETAFLEEFGDLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAP 693
Query: 406 KIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQISNYFVQF 465
K + + V + Q+ YR +E+ + + + K ++ +P + N ++
Sbjct: 694 KQETIIEVELTNIQKKYYRAILEK----NFSFLTKGANQHN------MPN--LINTMMEL 741
Query: 466 RKIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFECTLERVIE 508
RK NHP L+ +++ ++ +K H A F+ L+ +I+
Sbjct: 742 RKCCNHPYLING--AEEKILEDFRKTHSPDAPDFQ--LQAMIQ 780
Score = 37 (18.1 bits), Expect = 1.8e-36, Sum P(2) = 1.8e-36
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 499 FECTLERVIEELKNYSDFSIHQ 520
F+ T R+I L SD S+ Q
Sbjct: 1476 FDWTQFRIISRLDKKSDESLEQ 1497
>UNIPROTKB|F1NVT7 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 GeneTree:ENSGT00560000077077 EMBL:AADN02019534
EMBL:AADN02019532 EMBL:AADN02019533 IPI:IPI00818616
Ensembl:ENSGALT00000040615 ArrayExpress:F1NVT7 Uniprot:F1NVT7
Length = 1257
Score = 405 (147.6 bits), Expect = 1.9e-36, P = 1.9e-36
Identities = 116/348 (33%), Positives = 186/348 (53%)
Query: 168 LKPYQLVGVNFLLL-LYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCP 226
L+ YQL G+N+LL Y + ILADEMGLGKTIQ+IT+L + L GP LI+ P
Sbjct: 383 LREYQLEGMNWLLFNWYNR--KNCILADEMGLGKTIQSITFLSEI-FLMGIHGPFLIIAP 439
Query: 227 ASVLENWERELKKWCPSFSVLQYHGA--GRTAYSR-ELSSLAKAGLPPP--FNVLLVCYS 281
S + NWERE + W + + YHG+ R + E+ G P P F +V +
Sbjct: 440 LSTITNWEREFRTWT-EMNAIVYHGSQISRQMIQQYEMVYRDTQGNPLPGIFKFQVVI-T 497
Query: 282 LFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTP 341
FE D LK+ +W CV++DEAH LK++N + L +A +++LTGTP
Sbjct: 498 TFEMILA----DCPELKKIQWRCVVIDEAHRLKNRNCKLLEGLKLMA--LEHKVLLTGTP 551
Query: 342 LQNDLHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFILRRLKSDVMQ 401
LQN + EL+SLL F+ P F +E L++ + + + + +++SIL P +LRRLK DV +
Sbjct: 552 LQNSVEELFSLLNFLEPQQFPSETAFLEEFGDLKTEEQVKKLQSILKPMMLRRLKDDVEK 611
Query: 402 QLVPKIQWVEYVTMERPQEDAYRVAIEE-YRAVSRARIAKLSDADLATIVGVLPQRQISN 460
L PK + + V + Q+ YR +E+ + +S+ + ++ ++ N
Sbjct: 612 NLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGA----NQHNMPNLI---------N 658
Query: 461 YFVQFRKIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFECTLERVIE 508
++ RK NHP L+ +++ ++ +K H A F+ L+ +I+
Sbjct: 659 TMMELRKCCNHPYLING--AEEKILEDFRKTHSPEAPDFQ--LQAMIQ 702
>UNIPROTKB|J9NZH0 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0031491 "nucleosome binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:AAEX03026896
Ensembl:ENSCAFT00000048721 Uniprot:J9NZH0
Length = 850
Score = 388 (141.6 bits), Expect = 2.0e-36, Sum P(2) = 2.0e-36
Identities = 86/232 (37%), Positives = 138/232 (59%)
Query: 197 GLGKTIQAITYLMLLKHLNNDPGPHLIVCPASVLENWERELKKWCPSFSVLQYHGA--GR 254
GLGKT+Q I L LKH N PGPH+++ P S L NW E K+W PS V+ + G R
Sbjct: 3 GLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLYNWMNEFKRWVPSLRVICFVGDKDAR 62
Query: 255 TAYSRELSSLAKAGLPPPFNVLLVCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALK 314
A+ R+ +P ++V + Y + +++K + K++ W +++DEAH +K
Sbjct: 63 AAFIRDEM------MPGEWDVCVTSYEMV----IKEKS---VFKKFHWRYLVIDEAHRIK 109
Query: 315 DKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSLLEFMMPDLFATED-----VDLK 369
++ S + ++ ++ N RL+LTGTPLQN+LHELW+LL F++PD+F + D D K
Sbjct: 110 NEKS-KLSEIVREFKSTN-RLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTK 167
Query: 370 KLLNGEDRDLIGRMKSILGPFILRRLKSDVMQQLVPKIQWVEYVTMERPQED 421
L D+ L+ R+ ++L PF+LRR+K+DV + L PK + Y+ + + Q +
Sbjct: 168 NCLG--DQKLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKVYLGLSKMQRE 217
Score = 39 (18.8 bits), Expect = 2.0e-36, Sum P(2) = 2.0e-36
Identities = 10/40 (25%), Positives = 17/40 (42%)
Query: 401 QQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAK 440
+Q + ++W+E ER A E VS ++ K
Sbjct: 517 KQKLGMVEWIEPPKRERKANYAVDAYFREALRVSEPKVPK 556
>UNIPROTKB|F1SDB8 [details] [associations]
symbol:CHD1L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0006974 GO:GO:0006338
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589
PROSITE:PS51154 GO:GO:0008026 OMA:TCQTIAL
GeneTree:ENSGT00670000098110 EMBL:CU462855
Ensembl:ENSSSCT00000007340 Uniprot:F1SDB8
Length = 905
Score = 402 (146.6 bits), Expect = 2.0e-36, P = 2.0e-36
Identities = 101/272 (37%), Positives = 151/272 (55%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+PYQL GVN+L + G IL DEMGLGKT Q I + L ND GP LI+CP
Sbjct: 48 LRPYQLEGVNWLAQCFHYQ-NGCILGDEMGLGKTCQTIAVFIYLAGRLNDEGPFLILCPL 106
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
SVL NW+ E+++ P + Y G + ++G F+VLL Y + +
Sbjct: 107 SVLSNWKEEMERCAPGLCCVTYAGDKEERAHLQQDLKQESG----FHVLLTTYEICLK-- 160
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
D LK + WS +++DEAH LK++NS K+L + RL+LTGTP+QN L
Sbjct: 161 -----DASFLKSFPWSVLVVDEAHRLKNQNSLLHKSLSEFS--VAFRLLLTGTPIQNSLQ 213
Query: 348 ELWSLLEFMMPDLFATEDVD--LKKLLNGE-DRDLIGRMKSILGPFILRRLKSDVMQQLV 404
EL+SLL F+ PDLF+ E+V+ +++ + E + + + +L PF+LRR+K++V +L
Sbjct: 214 ELYSLLSFVEPDLFSKEEVEDFVQRYEDIEKESESASELYKLLQPFLLRRVKAEVAAELP 273
Query: 405 PKIQWVEYVTMERPQEDAYRVAIEEYRAVSRA 436
K + V Y M Q+ Y+ + + +S A
Sbjct: 274 KKTEVVIYHGMSALQKKYYKAILMKDLEISDA 305
Score = 242 (90.2 bits), Expect = 4.4e-17, P = 4.4e-17
Identities = 68/208 (32%), Positives = 113/208 (54%)
Query: 293 DRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSL 352
D LK + WS +++DEAH LK++NS K+L + RL+LTGTP+QN L EL+SL
Sbjct: 161 DASFLKSFPWSVLVVDEAHRLKNQNSLLHKSLSEFS--VAFRLLLTGTPIQNSLQELYSL 218
Query: 353 LEFMMPDLFATEDVD--LKKLLNGE-DRDLIGRMKSILGPFILRRLKSDVMQQLVPKIQW 409
L F+ PDLF+ E+V+ +++ + E + + + +L PF+LRR+K++V +L K +
Sbjct: 219 LSFVEPDLFSKEEVEDFVQRYEDIEKESESASELYKLLQPFLLRRVKAEVAAELPKKTEV 278
Query: 410 VEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQISNYFVQFRKIA 469
V Y M Q+ Y+ + + +S A + ++A V ++ N Q RK
Sbjct: 279 VIYHGMSALQKKYYKAILMKDLEISDA-----FENEMAKKV------KLQNVLSQLRKCV 327
Query: 470 NHPLLVRRIYSD-----DDVVRFAKKLH 492
+HP L + + D ++ + KLH
Sbjct: 328 DHPYLFDGVEPEPFEIGDHLIEASGKLH 355
>UNIPROTKB|G3MXX3 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AHSWCKN EMBL:DAAA02051958 Ensembl:ENSBTAT00000065179
Uniprot:G3MXX3
Length = 1810
Score = 401 (146.2 bits), Expect = 2.1e-36, Sum P(2) = 2.1e-36
Identities = 101/272 (37%), Positives = 153/272 (56%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQL G+N+L + K + ILADEMGLGKTIQ I++L L H + GP LIV P
Sbjct: 466 LRDYQLEGLNWLAHSWCKSNS-VILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPL 524
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYS-RELSSLAKAGLPPPFNVLLVCYSLFERH 286
S L +W+RE + W P +V+ Y G + + RE + FN L+ Y + +
Sbjct: 525 STLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLKFNALITTYEILLK- 583
Query: 287 SVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDL 346
D+ +L W+ + +DEAH LK+ +S +K L+ +N RL++TGTPLQN L
Sbjct: 584 ------DKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDF--KSNHRLLITGTPLQNSL 635
Query: 347 HELWSLLEFMMPDLFAT-EDVDLKKLLNGEDRDL-IGRMKSILGPFILRRLKSDVMQQLV 404
ELWSLL F+MP+ F ED + +G+ R+ + +L PF+LRR+K DV + L
Sbjct: 636 KELWSLLHFIMPEKFEFWEDFEED---HGKGRENGYQSLHKVLEPFLLRRVKKDVEKSLP 692
Query: 405 PKIQWVEYVTMERPQEDAYR-VAIEEYRAVSR 435
K++ + V M Q+ Y+ + Y+A+++
Sbjct: 693 AKVEQILRVEMSALQKQYYKWILTRNYKALAK 724
Score = 37 (18.1 bits), Expect = 2.1e-36, Sum P(2) = 2.1e-36
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 155 DACGDEDSDFQP 166
+A GD SDF P
Sbjct: 266 EANGDPSSDFDP 277
>ZFIN|ZDB-GENE-040426-892 [details] [associations]
symbol:chd1l "chromodomain helicase DNA binding
protein 1-like" species:7955 "Danio rerio" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0000166 "nucleotide binding" evidence=IEA;ISS] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 InterPro:IPR001357
ZFIN:ZDB-GENE-040426-892 GO:GO:0005524 GO:GO:0005634 GO:GO:0000166
GO:GO:0003677 GO:GO:0006281 GO:GO:0006974 GO:GO:0016887
GO:GO:0006338 GO:GO:0004386 SUPFAM:SSF52113 PROSITE:PS50172
HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154 CTD:9557
HOGENOM:HOG000030789 HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV
EMBL:BC050498 IPI:IPI00482841 RefSeq:NP_956607.1 UniGene:Dr.84280
ProteinModelPortal:Q7ZU90 PRIDE:Q7ZU90 GeneID:393283
KEGG:dre:393283 InParanoid:Q7ZU90 NextBio:20814340
ArrayExpress:Q7ZU90 Uniprot:Q7ZU90
Length = 1026
Score = 403 (146.9 bits), Expect = 2.1e-36, P = 2.1e-36
Identities = 100/264 (37%), Positives = 148/264 (56%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+PYQL GV +L L K G IL DEMGLGKT Q I+ L + GP L++CP
Sbjct: 35 LRPYQLDGVKWLSLCM-KNQQGCILGDEMGLGKTCQTISLLAYARGSLKMNGPFLVLCPL 93
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
+VLENW +EL+++CPS SV+ Y G EL K+ P F+VLL Y + +
Sbjct: 94 AVLENWRQELERFCPSLSVICY--TGDKEKRAELQQNLKSD--PRFHVLLTTYEMCLK-- 147
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
D + LK W+W +++DEAH LK++ S + L R++LTGTP+QN+L
Sbjct: 148 -----DARYLKSWKWKILVVDEAHRLKNQESLLHQTLKEFT--VGFRVLLTGTPIQNNLQ 200
Query: 348 ELWSLLEFMMPDLF---ATED-VDLKKLLNGEDRDLIGRMKSILGPFILRRLKSDVMQQL 403
E++SLL F+ P +F A ED V+ + E L+ + +L PF+LRR+K++V +L
Sbjct: 201 EVYSLLTFIQPSVFLPEAVEDFVNAYADIQTEPA-LVDELHQVLQPFLLRRVKAEVAAEL 259
Query: 404 VPKIQWVEYVTMERPQEDAYRVAI 427
K + V + + Q+ Y+ +
Sbjct: 260 PKKTELVVFHGLSALQKRYYKAIL 283
Score = 213 (80.0 bits), Expect = 8.4e-14, P = 8.4e-14
Identities = 59/186 (31%), Positives = 98/186 (52%)
Query: 293 DRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSL 352
D + LK W+W +++DEAH LK++ S + L R++LTGTP+QN+L E++SL
Sbjct: 148 DARYLKSWKWKILVVDEAHRLKNQESLLHQTLKEFT--VGFRVLLTGTPIQNNLQEVYSL 205
Query: 353 LEFMMPDLF---ATED-VDLKKLLNGEDRDLIGRMKSILGPFILRRLKSDVMQQLVPKIQ 408
L F+ P +F A ED V+ + E L+ + +L PF+LRR+K++V +L K +
Sbjct: 206 LTFIQPSVFLPEAVEDFVNAYADIQTEPA-LVDELHQVLQPFLLRRVKAEVAAELPKKTE 264
Query: 409 WVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQISNYFVQFRKI 468
V + + Q+ Y+ + R + R D +T + ++ N +Q RK
Sbjct: 265 LVVFHGLSALQKRYYKAIL--MRDLDAFR------TDQST------KTRLLNVLMQLRKC 310
Query: 469 ANHPLL 474
+HP L
Sbjct: 311 VDHPYL 316
>UNIPROTKB|Q9NRZ9 [details] [associations]
symbol:HELLS "Lymphoid-specific helicase" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0001655 "urogenital system development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005721
"centromeric heterochromatin" evidence=ISS] [GO:0006346
"methylation-dependent chromatin silencing" evidence=ISS]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0010216 "maintenance of DNA methylation" evidence=ISS]
[GO:0031508 "centromeric heterochromatin assembly" evidence=ISS]
[GO:0000775 "chromosome, centromeric region" evidence=ISS]
[GO:0046651 "lymphocyte proliferation" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0005634 GO:GO:0051301 GO:GO:0007067 GO:GO:0003677
EMBL:CH471066 GO:GO:0006351 GO:GO:0003682 GO:GO:0001655
GO:GO:0004386 GO:GO:0005721 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031508
GO:GO:0010216 GO:GO:0006346 GO:GO:0046651 EMBL:AF155827
EMBL:AB102717 EMBL:AB102718 EMBL:AB102719 EMBL:AB102720
EMBL:AB102721 EMBL:AB102722 EMBL:AK314485 EMBL:AB113249
EMBL:BX538033 EMBL:AL138759 EMBL:BC015477 EMBL:BC029381
EMBL:BC030963 EMBL:BC031004 EMBL:AY007108 EMBL:AB074174
IPI:IPI00010590 IPI:IPI00807418 IPI:IPI00807455 IPI:IPI00807553
IPI:IPI00807574 IPI:IPI00807597 IPI:IPI00807667 IPI:IPI00807698
IPI:IPI00807726 RefSeq:NP_060533.2 UniGene:Hs.655830
ProteinModelPortal:Q9NRZ9 SMR:Q9NRZ9 IntAct:Q9NRZ9 STRING:Q9NRZ9
PhosphoSite:Q9NRZ9 DMDM:74761670 PaxDb:Q9NRZ9 PRIDE:Q9NRZ9
DNASU:3070 Ensembl:ENST00000348459 Ensembl:ENST00000394036
Ensembl:ENST00000394044 Ensembl:ENST00000394045 GeneID:3070
KEGG:hsa:3070 UCSC:uc001kjs.3 UCSC:uc009xul.3 UCSC:uc009xum.3
CTD:3070 GeneCards:GC10P096305 H-InvDB:HIX0017337 HGNC:HGNC:4861
HPA:CAB004491 MIM:603946 neXtProt:NX_Q9NRZ9 PharmGKB:PA35054
HOVERGEN:HBG060049 OrthoDB:EOG4SN1N4 PhylomeDB:Q9NRZ9 ChiTaRS:HELLS
GenomeRNAi:3070 NextBio:12147 ArrayExpress:Q9NRZ9 Bgee:Q9NRZ9
Genevestigator:Q9NRZ9 GermOnline:ENSG00000119969 Uniprot:Q9NRZ9
Length = 838
Score = 375 (137.1 bits), Expect = 2.6e-36, Sum P(2) = 2.6e-36
Identities = 96/274 (35%), Positives = 144/274 (52%)
Query: 167 VLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCP 226
V++ YQ+ G+ +L +L+ GI G ILADEMGLGKT+Q I + L+ PGP L+ P
Sbjct: 222 VMRWYQVEGMEWLRMLWENGING-ILADEMGLGKTVQCIATIALMIQ-RGVPGPFLVCGP 279
Query: 227 ASVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERH 286
S L NW E K++ P + YHG + + G V++ + + R
Sbjct: 280 LSTLPNWMAEFKRFTPDIPTMLYHGTQEERQKLVRNIYKRKGTLQIHPVVITSFEIAMR- 338
Query: 287 SVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDL 346
DR L+ W +++DE H +K+ + L NA+ +L+LTGTPLQN+L
Sbjct: 339 ------DRNALQHCYWKYLIVDEGHRIKNMKCRLIRELKRF--NADNKLLLTGTPLQNNL 390
Query: 347 HELWSLLEFMMPDLF----ATED-VDLKKLLN-GED-------RDLIGRMKSILGPFILR 393
ELWSLL F++PD+F + E D+ L ED ++++ + IL PF+LR
Sbjct: 391 SELWSLLNFLLPDVFDDLKSFESWFDITSLSETAEDIIAKEREQNVLHMLHQILTPFLLR 450
Query: 394 RLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAI 427
RLKSDV ++ PK + V Y + + QE Y +
Sbjct: 451 RLKSDVALEVPPKREVVVYAPLSKKQEIFYTAIV 484
Score = 51 (23.0 bits), Expect = 2.6e-36, Sum P(2) = 2.6e-36
Identities = 17/56 (30%), Positives = 26/56 (46%)
Query: 457 QISNYFVQFRKIANHPLLVRRIYSDDDVVR-FAKKLHPMGAFGFECTLERVIEELK 511
++ N + RK NHP L+ Y D V + F + G L+R++ ELK
Sbjct: 559 KLQNIMMLLRKCCNHPYLIE--YPIDPVTQEFKIDEELVTNSGKFLILDRMLPELK 612
>UNIPROTKB|F1N734 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 OMA:CKWATME GeneTree:ENSGT00560000077077
EMBL:DAAA02036652 EMBL:DAAA02036653 EMBL:DAAA02036654
EMBL:DAAA02036655 IPI:IPI00924240 Ensembl:ENSBTAT00000061177
ArrayExpress:F1N734 Uniprot:F1N734
Length = 2720
Score = 408 (148.7 bits), Expect = 2.8e-36, P = 2.8e-36
Identities = 109/344 (31%), Positives = 185/344 (53%)
Query: 168 LKPYQLVGVNFLLL-LYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCP 226
L+ YQL G+N+LL Y + ILADEMGLGKTIQ+IT+L + L GP LI+ P
Sbjct: 460 LREYQLEGMNWLLFNWYNR--KNCILADEMGLGKTIQSITFLSEI-FLRGIHGPFLIIAP 516
Query: 227 ASVLENWERELKKWCPSFSVLQYHGAGRTAYS-RELSSLAKAGLPPPFNVLLVCYSLFER 285
S + NWERE + W + + YHG+ + ++ + + P + + + +
Sbjct: 517 LSTITNWEREFRTWT-EMNAIVYHGSQISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITT 575
Query: 286 HSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
+ D + LK+ WSCV++DEAH LK++N + L +A +++LTGTPLQN
Sbjct: 576 FEMILADCPE-LKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMA--LEHKVLLTGTPLQNS 632
Query: 346 LHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFILRRLKSDVMQQLVP 405
+ EL+SLL F+ P F +E L++ + + + + +++SIL P +LRRLK DV + L P
Sbjct: 633 VEELFSLLNFLEPSQFPSETAFLEEFGDLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAP 692
Query: 406 KIQWVEYVTMERPQEDAYRVAIEE-YRAVSRARIAKLSDADLATIVGVLPQRQISNYFVQ 464
K + + V + Q+ YR +E+ + +S+ + ++ ++ N ++
Sbjct: 693 KQETIIEVELTNIQKKYYRAILEKNFSFLSKGA----NQHNMPNLI---------NTMME 739
Query: 465 FRKIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFECTLERVIE 508
RK NHP L+ +++ ++ +K H A F+ L+ +I+
Sbjct: 740 LRKCCNHPYLISG--AEEKILEDFRKTHSPDAPDFQ--LQAMIQ 779
>UNIPROTKB|I3LRQ2 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
GeneTree:ENSGT00560000076896 EMBL:CT954235 EMBL:CU466964
Ensembl:ENSSSCT00000027293 Uniprot:I3LRQ2
Length = 1051
Score = 401 (146.2 bits), Expect = 3.6e-36, P = 3.6e-36
Identities = 101/272 (37%), Positives = 153/272 (56%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQL G+N+L + K + ILADEMGLGKTIQ I++L L H + GP LIV P
Sbjct: 486 LRDYQLEGLNWLAHSWCKSNS-VILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPL 544
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYS-RELSSLAKAGLPPPFNVLLVCYSLFERH 286
S L +W+RE + W P +V+ Y G + + RE + FN L+ Y + +
Sbjct: 545 STLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLKFNALITTYEILLK- 603
Query: 287 SVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDL 346
D+ +L W+ + +DEAH LK+ +S +K L+ +N RL++TGTPLQN L
Sbjct: 604 ------DKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDF--KSNHRLLITGTPLQNSL 655
Query: 347 HELWSLLEFMMPDLFAT-EDVDLKKLLNGEDRDL-IGRMKSILGPFILRRLKSDVMQQLV 404
ELWSLL F+MP+ F ED + +G+ R+ + +L PF+LRR+K DV + L
Sbjct: 656 KELWSLLHFIMPEKFEFWEDFEED---HGKGRENGYQSLHKVLEPFLLRRVKKDVEKSLP 712
Query: 405 PKIQWVEYVTMERPQEDAYR-VAIEEYRAVSR 435
K++ + V M Q+ Y+ + Y+A+++
Sbjct: 713 AKVEQILRVEMSALQKQYYKWILTRNYKALAK 744
>UNIPROTKB|F1NLW6 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 EMBL:AADN02019534 EMBL:AADN02019532
EMBL:AADN02019533 IPI:IPI00572954 Ensembl:ENSGALT00000002030
ArrayExpress:F1NLW6 Uniprot:F1NLW6
Length = 2005
Score = 405 (147.6 bits), Expect = 3.9e-36, P = 3.9e-36
Identities = 116/348 (33%), Positives = 186/348 (53%)
Query: 168 LKPYQLVGVNFLLL-LYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCP 226
L+ YQL G+N+LL Y + ILADEMGLGKTIQ+IT+L + L GP LI+ P
Sbjct: 258 LREYQLEGMNWLLFNWYNR--KNCILADEMGLGKTIQSITFLSEI-FLMGIHGPFLIIAP 314
Query: 227 ASVLENWERELKKWCPSFSVLQYHGA--GRTAYSR-ELSSLAKAGLPPP--FNVLLVCYS 281
S + NWERE + W + + YHG+ R + E+ G P P F +V +
Sbjct: 315 LSTITNWEREFRTWT-EMNAIVYHGSQISRQMIQQYEMVYRDTQGNPLPGIFKFQVVI-T 372
Query: 282 LFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTP 341
FE D LK+ +W CV++DEAH LK++N + L +A +++LTGTP
Sbjct: 373 TFEMILA----DCPELKKIQWRCVVIDEAHRLKNRNCKLLEGLKLMA--LEHKVLLTGTP 426
Query: 342 LQNDLHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFILRRLKSDVMQ 401
LQN + EL+SLL F+ P F +E L++ + + + + +++SIL P +LRRLK DV +
Sbjct: 427 LQNSVEELFSLLNFLEPQQFPSETAFLEEFGDLKTEEQVKKLQSILKPMMLRRLKDDVEK 486
Query: 402 QLVPKIQWVEYVTMERPQEDAYRVAIEE-YRAVSRARIAKLSDADLATIVGVLPQRQISN 460
L PK + + V + Q+ YR +E+ + +S+ + ++ ++ N
Sbjct: 487 NLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGA----NQHNMPNLI---------N 533
Query: 461 YFVQFRKIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFECTLERVIE 508
++ RK NHP L+ +++ ++ +K H A F+ L+ +I+
Sbjct: 534 TMMELRKCCNHPYLING--AEEKILEDFRKTHSPEAPDFQ--LQAMIQ 577
>UNIPROTKB|F1NLV5 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
OMA:CKWATME GeneTree:ENSGT00560000077077 EMBL:AADN02019534
EMBL:AADN02019532 EMBL:AADN02019533 IPI:IPI00588365
Ensembl:ENSGALT00000002034 ArrayExpress:F1NLV5 Uniprot:F1NLV5
Length = 2007
Score = 405 (147.6 bits), Expect = 3.9e-36, P = 3.9e-36
Identities = 116/348 (33%), Positives = 186/348 (53%)
Query: 168 LKPYQLVGVNFLLL-LYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCP 226
L+ YQL G+N+LL Y + ILADEMGLGKTIQ+IT+L + L GP LI+ P
Sbjct: 258 LREYQLEGMNWLLFNWYNR--KNCILADEMGLGKTIQSITFLSEI-FLMGIHGPFLIIAP 314
Query: 227 ASVLENWERELKKWCPSFSVLQYHGA--GRTAYSR-ELSSLAKAGLPPP--FNVLLVCYS 281
S + NWERE + W + + YHG+ R + E+ G P P F +V +
Sbjct: 315 LSTITNWEREFRTWT-EMNAIVYHGSQISRQMIQQYEMVYRDTQGNPLPGIFKFQVVI-T 372
Query: 282 LFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTP 341
FE D LK+ +W CV++DEAH LK++N + L +A +++LTGTP
Sbjct: 373 TFEMILA----DCPELKKIQWRCVVIDEAHRLKNRNCKLLEGLKLMA--LEHKVLLTGTP 426
Query: 342 LQNDLHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFILRRLKSDVMQ 401
LQN + EL+SLL F+ P F +E L++ + + + + +++SIL P +LRRLK DV +
Sbjct: 427 LQNSVEELFSLLNFLEPQQFPSETAFLEEFGDLKTEEQVKKLQSILKPMMLRRLKDDVEK 486
Query: 402 QLVPKIQWVEYVTMERPQEDAYRVAIEE-YRAVSRARIAKLSDADLATIVGVLPQRQISN 460
L PK + + V + Q+ YR +E+ + +S+ + ++ ++ N
Sbjct: 487 NLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGA----NQHNMPNLI---------N 533
Query: 461 YFVQFRKIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFECTLERVIE 508
++ RK NHP L+ +++ ++ +K H A F+ L+ +I+
Sbjct: 534 TMMELRKCCNHPYLING--AEEKILEDFRKTHSPEAPDFQ--LQAMIQ 577
>UNIPROTKB|B6ZLK2 [details] [associations]
symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000775
"chromosome, centromeric region" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0000775 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 EMBL:AB465210 IPI:IPI00573130 UniGene:Gga.4301
UniGene:Gga.8463 STRING:B6ZLK2 HOVERGEN:HBG005325
InterPro:IPR025260 Pfam:PF13907 Uniprot:B6ZLK2
Length = 1719
Score = 404 (147.3 bits), Expect = 4.0e-36, P = 4.0e-36
Identities = 102/275 (37%), Positives = 156/275 (56%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQL G+N+L + KG + ILADEMGLGKTIQ I++L L H + GP L+V P
Sbjct: 477 LRDYQLNGLNWLAHSWCKGNS-CILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPL 535
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPP----FNVLLVCYSLF 283
S L +W+RE++ W P + + Y G SR + + P FN+LL Y +
Sbjct: 536 STLTSWQREIQTWAPQMNAVVYLG---DITSRNMIRTHEWMHPQTKRLKFNILLTTYEIL 592
Query: 284 ERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQ 343
+ D+ L W+ + +DEAH LK+ +S +K L+ +N RL++TGTPLQ
Sbjct: 593 LK-------DKSFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDF--KSNHRLLITGTPLQ 643
Query: 344 NDLHELWSLLEFMMPDLFAT-EDVDLKKLLNGEDRDL-IGRMKSILGPFILRRLKSDVMQ 401
N L ELWSLL F+MP+ F++ ED + + +G+ R+ + L PF+LRR+K DV +
Sbjct: 644 NSLKELWSLLHFIMPEKFSSWEDFEEE---HGKGREYGYASLHKELEPFLLRRVKKDVEK 700
Query: 402 QLVPKIQWVEYVTMERPQEDAYR-VAIEEYRAVSR 435
L K++ + + M Q+ Y+ + Y+A+S+
Sbjct: 701 SLPAKVEQILRMEMSALQKQYYKWILTRNYKALSK 735
>UNIPROTKB|E1C1A9 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AHSWCKN EMBL:AADN02041467 EMBL:AADN02041468 EMBL:AADN02041469
EMBL:AADN02041470 IPI:IPI00575702 Ensembl:ENSGALT00000011260
Uniprot:E1C1A9
Length = 1727
Score = 404 (147.3 bits), Expect = 4.0e-36, P = 4.0e-36
Identities = 102/273 (37%), Positives = 152/273 (55%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQL G+N+L + K + ILADEMGLGKTIQ I++L L H + GP L+V P
Sbjct: 486 LRDYQLEGLNWLAHSWCKNNS-VILADEMGLGKTIQTISFLSYLFHQHQLYGPFLVVVPL 544
Query: 228 SVLENWERELKKWCPSFSVLQYHG--AGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFER 285
S L +W+RE + W P +V+ Y G R RE + FN L+ Y + +
Sbjct: 545 STLTSWQREFEVWAPEINVVVYIGDLMSRNMI-REYEWIHSQSKRLKFNALITTYEILLK 603
Query: 286 HSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
D+ +L W+ + +DEAH LK+ +S +K L+ +N RL++TGTPLQN
Sbjct: 604 -------DKAVLGSISWAFLGVDEAHRLKNDDSLLYKTLIDF--KSNHRLLITGTPLQNS 654
Query: 346 LHELWSLLEFMMPDLFAT-EDVDLKKLLNGEDRDL-IGRMKSILGPFILRRLKSDVMQQL 403
L ELWSLL F+MP+ F ED + +G+ R+ + +L PF+LRR+K DV + L
Sbjct: 655 LKELWSLLHFIMPEKFEFWEDFEED---HGKGRENGYQSLHKVLEPFLLRRVKKDVEKSL 711
Query: 404 VPKIQWVEYVTMERPQEDAYR-VAIEEYRAVSR 435
K++ + V M Q+ Y+ + Y+A+S+
Sbjct: 712 PAKVEQILRVEMSALQKQYYKWILTRNYKALSK 744
>UNIPROTKB|F1PTH3 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 OMA:CKWATME GeneTree:ENSGT00560000077077
EMBL:AAEX03013942 EMBL:AAEX03013943 Ensembl:ENSCAFT00000014716
Uniprot:F1PTH3
Length = 2715
Score = 406 (148.0 bits), Expect = 4.5e-36, P = 4.5e-36
Identities = 110/343 (32%), Positives = 185/343 (53%)
Query: 168 LKPYQLVGVNFLLL-LYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCP 226
L+ YQL G+N+LL Y + ILADEMGLGKTIQ+IT+L + L GP LI+ P
Sbjct: 461 LREYQLEGMNWLLFNWYNR--KNCILADEMGLGKTIQSITFLSEI-FLRGIHGPFLIIAP 517
Query: 227 ASVLENWERELKKWCPSFSVLQYHGAGRTAYS-RELSSLAKAGLPPPFNVLLVCYSLFER 285
S + NWERE + W + + YHG+ + ++ + + P + + + +
Sbjct: 518 LSTITNWEREFRTWT-EMNAIVYHGSQISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITT 576
Query: 286 HSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
+ D + LK+ WSCV++DEAH LK++N + L +A +++LTGTPLQN
Sbjct: 577 FEMILADCPE-LKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMA--LEHKVLLTGTPLQNS 633
Query: 346 LHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFILRRLKSDVMQQLVP 405
+ EL+SLL F+ P F +E L++ + + + + +++SIL P +LRRLK DV + L P
Sbjct: 634 VEELFSLLNFLEPSQFPSETAFLEEFGDLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAP 693
Query: 406 KIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQISNYFVQF 465
K + + V + Q+ YR +E+ + + + K ++ +P + N ++
Sbjct: 694 KQETIIEVELTNIQKKYYRAILEK----NFSFLTKGANQHN------MPN--LINTMMEL 741
Query: 466 RKIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFECTLERVIE 508
RK NHP L+ +++ ++ +K H A F+ L+ +I+
Sbjct: 742 RKCCNHPYLING--AEEKILEDFRKTHSPDAPDFQ--LQAMIQ 780
>UNIPROTKB|J9P0F6 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 CTD:84181 KO:K14436 GeneTree:ENSGT00560000077077
EMBL:AAEX03013942 EMBL:AAEX03013943 RefSeq:XP_534421.3
Ensembl:ENSCAFT00000048852 GeneID:477230 KEGG:cfa:477230
Uniprot:J9P0F6
Length = 2715
Score = 406 (148.0 bits), Expect = 4.5e-36, P = 4.5e-36
Identities = 110/343 (32%), Positives = 185/343 (53%)
Query: 168 LKPYQLVGVNFLLL-LYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCP 226
L+ YQL G+N+LL Y + ILADEMGLGKTIQ+IT+L + L GP LI+ P
Sbjct: 461 LREYQLEGMNWLLFNWYNR--KNCILADEMGLGKTIQSITFLSEI-FLRGIHGPFLIIAP 517
Query: 227 ASVLENWERELKKWCPSFSVLQYHGAGRTAYS-RELSSLAKAGLPPPFNVLLVCYSLFER 285
S + NWERE + W + + YHG+ + ++ + + P + + + +
Sbjct: 518 LSTITNWEREFRTWT-EMNAIVYHGSQISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITT 576
Query: 286 HSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
+ D + LK+ WSCV++DEAH LK++N + L +A +++LTGTPLQN
Sbjct: 577 FEMILADCPE-LKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMA--LEHKVLLTGTPLQNS 633
Query: 346 LHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFILRRLKSDVMQQLVP 405
+ EL+SLL F+ P F +E L++ + + + + +++SIL P +LRRLK DV + L P
Sbjct: 634 VEELFSLLNFLEPSQFPSETAFLEEFGDLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAP 693
Query: 406 KIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQISNYFVQF 465
K + + V + Q+ YR +E+ + + + K ++ +P + N ++
Sbjct: 694 KQETIIEVELTNIQKKYYRAILEK----NFSFLTKGANQHN------MPN--LINTMMEL 741
Query: 466 RKIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFECTLERVIE 508
RK NHP L+ +++ ++ +K H A F+ L+ +I+
Sbjct: 742 RKCCNHPYLING--AEEKILEDFRKTHSPDAPDFQ--LQAMIQ 780
>UNIPROTKB|H9L0N0 [details] [associations]
symbol:H9L0N0 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 EMBL:AADN02032856 EMBL:AADN02032857
EMBL:AADN02032858 EMBL:AADN02032859 EMBL:AADN02032860
EMBL:AADN02032861 EMBL:AADN02032862 EMBL:AADN02032863
EMBL:AADN02032864 EMBL:AADN02032865 Ensembl:ENSGALT00000023599
Uniprot:H9L0N0
Length = 1444
Score = 402 (146.6 bits), Expect = 5.0e-36, P = 5.0e-36
Identities = 102/275 (37%), Positives = 155/275 (56%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQL G+N+L + KG + ILADEMGLGKTIQ I++L L H + GP L+V P
Sbjct: 156 LRDYQLNGLNWLAHSWCKGNS-CILADEMGLGKTIQTISFLNYLFHEHELYGPFLLVVPL 214
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPP----FNVLLVCYSLF 283
S L +W+RE++ W P + + Y G SR + + P FN+LL Y +
Sbjct: 215 STLTSWQREIQTWAPQMNAVVYLG---DITSRNMIRTHEWMHPQTKRLKFNILLTTYEIL 271
Query: 284 ERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQ 343
+ D+ L W + +DEAH LK+ +S +K L+ +N RL++TGTPLQ
Sbjct: 272 LK-------DKSFLGGLNWVFIGIDEAHRLKNDDSLLYKTLIDF--KSNHRLLITGTPLQ 322
Query: 344 NDLHELWSLLEFMMPDLFAT-EDVDLKKLLNGEDRDL-IGRMKSILGPFILRRLKSDVMQ 401
N L ELWSLL F+MP+ F++ ED + + +G+ R+ + L PF+LRR+K DV +
Sbjct: 323 NSLKELWSLLHFIMPEKFSSWEDFEEE---HGKGREFGYASLHKELEPFLLRRVKKDVEK 379
Query: 402 QLVPKIQWVEYVTMERPQEDAYR-VAIEEYRAVSR 435
L K++ + + M Q+ Y+ + Y+A+S+
Sbjct: 380 SLPAKVEQILRMEMSALQKQYYKWILTRNYKALSK 414
>UNIPROTKB|F1PWD8 [details] [associations]
symbol:CHD7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 SMART:SM00717 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0003682 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 OMA:TFGVIFD EMBL:AAEX03015818
EMBL:AAEX03015819 EMBL:AAEX03015820 Ensembl:ENSCAFT00000011497
GeneTree:ENSGT00700000105087 Uniprot:F1PWD8
Length = 2994
Score = 406 (148.0 bits), Expect = 5.1e-36, P = 5.1e-36
Identities = 110/344 (31%), Positives = 182/344 (52%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQL GVN+LL + + ILADEMGLGKTIQ+IT+L + +L GP L++ P
Sbjct: 967 LREYQLEGVNWLLFNWYN-MRNCILADEMGLGKTIQSITFLYEI-YLKGIHGPFLVIAPL 1024
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
S + NWERE + W +V+ YHG+ A R + S P V+ Y +
Sbjct: 1025 STIPNWEREFRTWT-ELNVVVYHGS--QASRRTIQSYEMYFKDPQGRVIKGSYKFHAIIT 1081
Query: 288 VQQK--DDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
+ D L+ W CV++DEAH LK++N + L + + +++LTGTPLQN
Sbjct: 1082 TFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMM--DLEHKVLLTGTPLQNT 1139
Query: 346 LHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFILRRLKSDVMQQLVP 405
+ EL+SLL F+ P F +E +++ + + + + ++++IL P +LRRLK DV + L P
Sbjct: 1140 VEELFSLLHFLEPSRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAP 1199
Query: 406 KIQWVEYVTMERPQEDAYRVAIEE-YRAVSRARIAKLSDADLATIVGVLPQRQISNYFVQ 464
K + + V + Q+ YR +E+ + +S+ A + +L N ++
Sbjct: 1200 KEETIIEVELTNIQKKYYRAILEKNFTFLSKG-------GGQANVPNLL------NTMME 1246
Query: 465 FRKIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFECTLERVIE 508
RK NHP L+ +++ ++ K+ H + F+ L+ +I+
Sbjct: 1247 LRKCCNHPYLING--AEEKILEEFKETHNADSPDFQ--LQAMIQ 1286
>UNIPROTKB|E2QW28 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 OMA:ETFYTAI
GeneTree:ENSGT00550000075106 EMBL:AAEX03015428
Ensembl:ENSCAFT00000012889 Uniprot:E2QW28
Length = 839
Score = 372 (136.0 bits), Expect = 5.5e-36, Sum P(2) = 5.5e-36
Identities = 103/327 (31%), Positives = 166/327 (50%)
Query: 167 VLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCP 226
V++ YQ+ G+ +L +L+ GI G ILADEMGLGKT+Q I + L+ PGP L+ P
Sbjct: 223 VMRWYQVEGMEWLRMLWENGING-ILADEMGLGKTVQCIATIALMIQ-RGVPGPFLVCGP 280
Query: 227 ASVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERH 286
S L NW E +++ P + YHG + + + G V++ + + R
Sbjct: 281 LSTLPNWMAEFQRFTPDIPTMLYHGTQQERRKLVKNIHKRKGTLQIHPVVITSFEIAMR- 339
Query: 287 SVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDL 346
DR L+ W +++DE H +K+ + L NA+ +L+LTGTPLQN+L
Sbjct: 340 ------DRNALQHCYWKYLIVDEGHRIKNMKCRLIRELKRF--NADNKLLLTGTPLQNNL 391
Query: 347 HELWSLLEFMMPDLF----ATED-VDLKKLLN-GED-------RDLIGRMKSILGPFILR 393
ELWSLL F++PD+F + E D+ L ED ++++ + IL PF+LR
Sbjct: 392 SELWSLLNFLLPDVFDDLKSFESWFDITSLSETAEDIIAKEREQNVLHMLHQILTPFLLR 451
Query: 394 RLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVL 453
RLKSDV ++ PK + V Y + + QE Y + R + A + S+ + +
Sbjct: 452 RLKSDVALEVPPKREVVVYAPLSKKQEIFYTAIVN--RTI--ANMFGCSEKETVELSPTG 507
Query: 454 PQRQISNYFVQFRKIANHPLLVRRIYS 480
R+ + + + KI + P + ++ S
Sbjct: 508 RPRRRARKSINYSKIDDFPNELEKLIS 534
Score = 51 (23.0 bits), Expect = 5.5e-36, Sum P(2) = 5.5e-36
Identities = 17/56 (30%), Positives = 26/56 (46%)
Query: 457 QISNYFVQFRKIANHPLLVRRIYSDDDVVR-FAKKLHPMGAFGFECTLERVIEELK 511
++ N + RK NHP L+ Y D V + F + G L+R++ ELK
Sbjct: 560 KLQNIMMLLRKCCNHPYLIE--YPIDPVTQEFKIDEELVTNSGKFLILDRMLPELK 613
>FB|FBgn0000212 [details] [associations]
symbol:brm "brahma" species:7227 "Drosophila melanogaster"
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=ISS;IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=NAS]
[GO:0003713 "transcription coactivator activity" evidence=ISS;NAS]
[GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0048096
"chromatin-mediated maintenance of transcription" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0035060 "brahma
complex" evidence=IDA;TAS] [GO:0048477 "oogenesis" evidence=TAS]
[GO:0045749 "negative regulation of S phase of mitotic cell cycle"
evidence=IGI] [GO:0035172 "hemocyte proliferation" evidence=TAS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0007474 "imaginal disc-derived wing vein specification"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0007517 "muscle organ development" evidence=IMP] [GO:0048813
"dendrite morphogenesis" evidence=IMP] [GO:0006911 "phagocytosis,
engulfment" evidence=IMP] [GO:0007409 "axonogenesis" evidence=IMP]
[GO:0007480 "imaginal disc-derived leg morphogenesis" evidence=IGI]
[GO:0008586 "imaginal disc-derived wing vein morphogenesis"
evidence=IMP] [GO:0008587 "imaginal disc-derived wing margin
morphogenesis" evidence=IMP] [GO:0045742 "positive regulation of
epidermal growth factor receptor signaling pathway" evidence=IMP]
[GO:0070983 "dendrite guidance" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0043974 "histone H3-K27
acetylation" evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0045893 GO:GO:0006911 EMBL:AE014296 GO:GO:0003677
GO:GO:0008586 GO:GO:0007474 GO:GO:0048477 GO:GO:0006351
GO:GO:0016887 GO:GO:0007517 GO:GO:0007409 GO:GO:0004386
GO:GO:0045742 GO:GO:0007480 GO:GO:0045749 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0008587 KO:K11647 EMBL:M85049
EMBL:AY095048 EMBL:BT009972 PIR:A42091 RefSeq:NP_536745.4
RefSeq:NP_536746.1 RefSeq:NP_730088.1 RefSeq:NP_730089.1
UniGene:Dm.5356 ProteinModelPortal:P25439 SMR:P25439 DIP:DIP-36728N
IntAct:P25439 MINT:MINT-6541230 STRING:P25439 PaxDb:P25439
EnsemblMetazoa:FBtr0075525 EnsemblMetazoa:FBtr0075526 GeneID:39744
KEGG:dme:Dmel_CG5942 CTD:39744 FlyBase:FBgn0000212
GeneTree:ENSGT00550000074659 InParanoid:P25439 OMA:QKKYTIS
OrthoDB:EOG4K3JB3 PhylomeDB:P25439 ChiTaRS:SMARCA2 GenomeRNAi:39744
NextBio:815155 Bgee:P25439 GermOnline:CG5942 GO:GO:0035060
GO:GO:0070983 GO:GO:0035172 GO:GO:0043974 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 Uniprot:P25439
Length = 1638
Score = 402 (146.6 bits), Expect = 6.1e-36, P = 6.1e-36
Identities = 111/324 (34%), Positives = 166/324 (51%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
LK YQ+ G+ +L+ LY + G ILADEMGLGKTIQ I+ + L GP+LI+ P
Sbjct: 773 LKEYQIKGLEWLVSLYNNNLNG-ILADEMGLGKTIQTISLVTYLMDRKKVMGPYLIIVPL 831
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
S L NW E +KW P+ V+ Y G+ + R L + +A FNVLL Y +
Sbjct: 832 STLPNWVLEFEKWAPAVGVVSYKGSPQGR--RLLQNQMRA---TKFNVLLTTYEYVIK-- 884
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
D+ +L + +W +++DE H +K+ + + +++ A RL+LTGTPLQN L
Sbjct: 885 -----DKAVLAKIQWKYMIIDEGHRMKNHHC-KLTQVLNTHYIAPYRLLLTGTPLQNKLP 938
Query: 348 ELWSLLEFMMPDLFAT------------EDVDLKKLLNGEDRDLI-GRMKSILGPFILRR 394
ELW+LL F++P +F + K LN E+ LI R+ +L PF+LRR
Sbjct: 939 ELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRR 998
Query: 395 LKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLP 454
LK +V QL K++++ M Q Y+ S+ + L+D G
Sbjct: 999 LKKEVEHQLPDKVEYIIKCDMSALQRVLYK------HMQSKGVL--LTDGSEKGKHGKGG 1050
Query: 455 QRQISNYFVQFRKIANHPLLVRRI 478
+ + N VQ RK+ NHP + + I
Sbjct: 1051 AKALMNTIVQLRKLCNHPFMFQHI 1074
>UNIPROTKB|E1BCV0 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046651 "lymphocyte proliferation" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0031508 "centromeric heterochromatin assembly"
evidence=IEA] [GO:0010216 "maintenance of DNA methylation"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001655 "urogenital system
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0001655 GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216
OMA:ETFYTAI GO:GO:0006346 GO:GO:0046651
GeneTree:ENSGT00550000075106 EMBL:DAAA02058849 EMBL:DAAA02058850
EMBL:DAAA02058851 IPI:IPI00710948 Ensembl:ENSBTAT00000007848
Uniprot:E1BCV0
Length = 816
Score = 370 (135.3 bits), Expect = 6.2e-36, Sum P(2) = 6.2e-36
Identities = 108/328 (32%), Positives = 169/328 (51%)
Query: 167 VLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCP 226
V++ YQ+ G+ +L +L+ GI G ILADEMGLGKT+Q I + L+ PGP L+ P
Sbjct: 200 VMRWYQVEGMEWLRMLWENGING-ILADEMGLGKTVQCIATIALMIQ-RGVPGPFLVCGP 257
Query: 227 ASVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERH 286
S L NW E K++ P + YHG T R + L K + L + +
Sbjct: 258 LSTLPNWMAEFKRFTPEIPTMLYHG---TQQERRI--LVKH-IHERKGTLQIHPVVITSF 311
Query: 287 SVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDL 346
+ +D R L+ W +++DE H +K+ + L NA+ +L+LTGTPLQN+L
Sbjct: 312 EIAMRD-RTTLQNCYWKYLIVDEGHRIKNMKCRLIRELKRF--NADNKLLLTGTPLQNNL 368
Query: 347 HELWSLLEFMMPDLF----ATED-VDLKKLLN-GED-------RDLIGRMKSILGPFILR 393
ELWSLL F++PD+F + E D+ L ED ++++ + IL PF+LR
Sbjct: 369 SELWSLLNFLLPDVFDDLKSFESWFDITSLSETAEDIIAKEREQNVLHMLHQILTPFLLR 428
Query: 394 RLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGV- 452
RLKSDV ++ PK + V Y + + QE Y + R + A + S+ + +
Sbjct: 429 RLKSDVALEVPPKREVVVYAPLSKKQEIFYTAIVN--RTI--ANMFGSSEKETVELSPTG 484
Query: 453 LPQRQISNYFVQFRKIANHPLLVRRIYS 480
P+R+ + V + KI + P + ++ S
Sbjct: 485 RPKRR-TRKSVDYSKIDDFPNELEKLIS 511
Score = 52 (23.4 bits), Expect = 6.2e-36, Sum P(2) = 6.2e-36
Identities = 17/56 (30%), Positives = 26/56 (46%)
Query: 457 QISNYFVQFRKIANHPLLVRRIYSDDDVVR-FAKKLHPMGAFGFECTLERVIEELK 511
++ N + RK NHP L+ Y D V + F + G L+R++ ELK
Sbjct: 537 KLQNIMMLLRKCCNHPYLIE--YPIDPVTQEFKVDEELVTNSGKFLILDRMLPELK 590
>UNIPROTKB|F1SC64 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046651 "lymphocyte proliferation" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0031508 "centromeric heterochromatin assembly"
evidence=IEA] [GO:0010216 "maintenance of DNA methylation"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001655 "urogenital system
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0001655 GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216
OMA:ETFYTAI GO:GO:0006346 GO:GO:0046651
GeneTree:ENSGT00550000075106 EMBL:CU468514
Ensembl:ENSSSCT00000011474 Uniprot:F1SC64
Length = 838
Score = 371 (135.7 bits), Expect = 7.1e-36, Sum P(2) = 7.1e-36
Identities = 95/274 (34%), Positives = 146/274 (53%)
Query: 167 VLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCP 226
V++ YQ+ G+ +L +L+ GI G ILADEMGLGKT+Q I + L+ PGP L+ P
Sbjct: 222 VMRWYQVEGMEWLRMLWENGING-ILADEMGLGKTVQCIATIALMIQ-RGVPGPFLVCGP 279
Query: 227 ASVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERH 286
S L NW E +++ P + YHG+ + + G V++ + + R
Sbjct: 280 LSTLPNWMAEFQRFTPEIPTMLYHGSQQERRKLVNHIHKRKGTLQIHPVVITSFEIAMR- 338
Query: 287 SVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDL 346
DR +L+ W +++DE H +K+ + L NA+ +L+LTGTPLQN+L
Sbjct: 339 ------DRNVLQHCYWKYLIVDEGHRIKNMKCRLIRELKRF--NADNKLLLTGTPLQNNL 390
Query: 347 HELWSLLEFMMPDLF----ATED-VDLKKLLN-GED-------RDLIGRMKSILGPFILR 393
ELWSLL F++PD+F + E D+ L ED ++++ + IL PF+LR
Sbjct: 391 SELWSLLNFLLPDVFDDLKSFESWFDITSLSETAEDIIAKEREQNVLHMLHQILTPFLLR 450
Query: 394 RLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAI 427
RLKSDV ++ PK + V Y + + QE Y +
Sbjct: 451 RLKSDVALEVPPKREVVVYAPLSKKQEVFYTAIV 484
Score = 51 (23.0 bits), Expect = 7.1e-36, Sum P(2) = 7.1e-36
Identities = 17/56 (30%), Positives = 26/56 (46%)
Query: 457 QISNYFVQFRKIANHPLLVRRIYSDDDVVR-FAKKLHPMGAFGFECTLERVIEELK 511
++ N + RK NHP L+ Y D V + F + G L+R++ ELK
Sbjct: 559 KLQNIMMLLRKCCNHPYLIE--YPIDPVTQEFKIDEELVTNSGKFLILDRMLPELK 612
>UNIPROTKB|E1BS47 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00717
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0003682 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 EMBL:AADN02022009 EMBL:AADN02022010
IPI:IPI00598234 Ensembl:ENSGALT00000005903 ArrayExpress:E1BS47
Uniprot:E1BS47
Length = 1326
Score = 400 (145.9 bits), Expect = 7.1e-36, P = 7.1e-36
Identities = 110/343 (32%), Positives = 181/343 (52%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQL GVN+LL + ILADEMGLGKTIQ+IT+L + +L GP L++ P
Sbjct: 154 LREYQLEGVNWLLFNWYN-TRNCILADEMGLGKTIQSITFLYEI-YLKGIHGPFLVIAPL 211
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
S + NWERE + W +V+ YHG+ A R + P V+ Y +
Sbjct: 212 STIPNWEREFRTWT-ELNVVVYHGS--QASRRTIQLYEMYFKDPQGRVIKGSYKFHAIIT 268
Query: 288 VQQK--DDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
+ D L+ W CV++DEAH LK++N + L + + +++LTGTPLQN
Sbjct: 269 TFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMM--DLEHKVLLTGTPLQNT 326
Query: 346 LHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFILRRLKSDVMQQLVP 405
+ EL+SLL F+ P F +E +++ + + + + ++++IL P +LRRLK DV + L P
Sbjct: 327 VEELFSLLHFLEPGRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAP 386
Query: 406 KIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQISNYFVQF 465
K + + V + Q+ YR +E+ + A ++K A + +L N ++
Sbjct: 387 KEETIIEVELTNIQKKYYRAILEK----NFAFLSK--GGGQANVPNLL------NTMMEL 434
Query: 466 RKIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFECTLERVIE 508
RK NHP L+ +++ ++ K+ H + F+ L+ +I+
Sbjct: 435 RKCCNHPYLING--AEEKILEEFKETHNADSPDFQ--LQAMIQ 473
>FB|FBgn0250786 [details] [associations]
symbol:Chd1 "Chromodomain-helicase-DNA-binding protein 1"
species:7227 "Drosophila melanogaster" [GO:0005705 "polytene
chromosome interband" evidence=IDA] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0005703 "polytene chromosome puff" evidence=IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0035042 "fertilization,
exchange of chromosomal proteins" evidence=IMP] [GO:0048477
"oogenesis" evidence=IMP] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
EMBL:AE014134 GO:GO:0006355 GO:GO:0003677 GO:GO:0048477
GO:GO:0006351 GO:GO:0003682 GO:GO:0004386 GO:GO:0007476
InterPro:IPR016197 SUPFAM:SSF54160 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598 GO:GO:0005703
InterPro:IPR025260 Pfam:PF13907 EMBL:L77907 PIR:T13944
RefSeq:NP_477197.1 ProteinModelPortal:Q7KU24 SMR:Q7KU24
STRING:Q7KU24 PaxDb:Q7KU24 PRIDE:Q7KU24 EnsemblMetazoa:FBtr0077674
GeneID:33505 KEGG:dme:Dmel_CG3733 UCSC:CG3733-RA CTD:1105
FlyBase:FBgn0250786 GeneTree:ENSGT00560000076896 InParanoid:Q7KU24
KO:K11367 OrthoDB:EOG45MKM5 PhylomeDB:Q7KU24 ChiTaRS:CHD1
GenomeRNAi:33505 NextBio:783939 Bgee:Q7KU24 GO:GO:0005705
GO:GO:0035042 Uniprot:Q7KU24
Length = 1883
Score = 394 (143.8 bits), Expect = 7.8e-36, Sum P(2) = 7.8e-36
Identities = 100/272 (36%), Positives = 155/272 (56%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQ+ G+N+LL + K + ILADEMGLGKTIQ I +L L +++ GP L V P
Sbjct: 528 LRDYQMDGLNWLLHSWCKENS-VILADEMGLGKTIQTICFLYSLFKIHHLYGPFLCVVPL 586
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
S + W+RE W P +V+ Y G + SREL + + C + +
Sbjct: 587 STMTAWQREFDLWAPDMNVVTYLGDIK---SRELIQQYEWQFESSKRLKFNC--ILTTYE 641
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
+ KD ++ L +W+ +L+DEAH LK+ +S +K+L + N RL++TGTPLQN L
Sbjct: 642 IVLKD-KQFLGTLQWAALLVDEAHRLKNDDSLLYKSLKEF--DTNHRLLITGTPLQNSLK 698
Query: 348 ELWSLLEFMMPDLFAT-EDVDLKKLLNGEDRDLIGRMKSILGPFILRRLKSDVMQQLVPK 406
ELW+LL F+MPD F T E+ +++ N ED+ R+ L P+ILRR+K DV + L K
Sbjct: 699 ELWALLHFIMPDKFDTWENFEVQHG-NAEDKGYT-RLHQQLEPYILRRVKKDVEKSLPAK 756
Query: 407 IQWVEYVTMERPQEDAYR-VAIEEYRAVSRAR 437
++ + V M Q+ Y+ + + + A+ + +
Sbjct: 757 VEQILRVEMTSLQKQYYKWILTKNFDALRKGK 788
Score = 250 (93.1 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 63/186 (33%), Positives = 105/186 (56%)
Query: 293 DRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSL 352
D++ L +W+ +L+DEAH LK+ +S +K+L + N RL++TGTPLQN L ELW+L
Sbjct: 646 DKQFLGTLQWAALLVDEAHRLKNDDSLLYKSLKEF--DTNHRLLITGTPLQNSLKELWAL 703
Query: 353 LEFMMPDLFAT-EDVDLKKLLNGEDRDLIGRMKSILGPFILRRLKSDVMQQLVPKIQWVE 411
L F+MPD F T E+ +++ N ED+ R+ L P+ILRR+K DV + L K++ +
Sbjct: 704 LHFIMPDKFDTWENFEVQHG-NAEDKGYT-RLHQQLEPYILRRVKKDVEKSLPAKVEQIL 761
Query: 412 YVTMERPQEDAYR-VAIEEYRAVSRARIAKLSDADLATIVGVLPQRQISNYFVQFRKIAN 470
V M Q+ Y+ + + + A+ + + S T + ++ ++ +K N
Sbjct: 762 RVEMTSLQKQYYKWILTKNFDALRKGKRGSTS-----TFLNIV---------IELKKCCN 807
Query: 471 HPLLVR 476
H L+R
Sbjct: 808 HAALIR 813
Score = 40 (19.1 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 253 GRTAYSRELSSLAKAGLPP 271
GR++ E SL+ AG PP
Sbjct: 55 GRSSPEPEDKSLSVAGFPP 73
Score = 39 (18.8 bits), Expect = 7.8e-36, Sum P(2) = 7.8e-36
Identities = 12/43 (27%), Positives = 16/43 (37%)
Query: 128 TTTSAACDRYAEVEASSVRIVTQSDIDDACGDEDSDFQPVLKP 170
T++S E E + Q DA DE SD + P
Sbjct: 124 TSSSLPKPEQNEEEDNETEAGQQQPASDASADESSDSSANVSP 166
>ASPGD|ASPL0000042729 [details] [associations]
symbol:AN2278 species:162425 "Emericella nidulans"
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0016586 "RSC complex" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194
SMART:SM00297 SMART:SM00490 SMART:SM00951 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 EMBL:BN001307
GO:GO:0004386 EMBL:AACD01000038 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
HOGENOM:HOG000172362 KO:K11786 OrthoDB:EOG4D565R RefSeq:XP_659882.1
ProteinModelPortal:Q5BB02 STRING:Q5BB02
EnsemblFungi:CADANIAT00008970 GeneID:2875521 KEGG:ani:AN2278.2
OMA:GSDHSSP Uniprot:Q5BB02
Length = 1407
Score = 400 (145.9 bits), Expect = 7.8e-36, P = 7.8e-36
Identities = 121/359 (33%), Positives = 183/359 (50%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
LK YQ+ G+ +++ LY + G ILADEMGLGKTIQ I+ + + + GP L++ P
Sbjct: 537 LKEYQMKGLQWMISLYNNNLNG-ILADEMGLGKTIQTISLITHIIERKRNNGPFLVIVPL 595
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
S L NW E +KW PS S + Y G A ++ ++ F VLL Y +
Sbjct: 596 STLTNWNLEFEKWAPSVSRIVYKGPPN-ARKQQQQNIRWGN----FQVLLTTYEYIIK-- 648
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
DR IL + +W+ +++DE H +K+ S + + +S + RL+LTGTPLQN+L
Sbjct: 649 -----DRPILSKIKWTHMIVDEGHRMKNTQS-KLSSTLSQYYTSRYRLILTGTPLQNNLP 702
Query: 348 ELWSLLEFMMPDLF-ATEDVDL---KKLLN--GEDR-DL--------IGRMKSILGPFIL 392
ELW+LL F++P++F + + D N G+DR DL I R+ +L PF+L
Sbjct: 703 ELWALLNFVLPNIFKSVKSFDEWFNTPFANTGGQDRMDLTEEEQLLVIRRLHKVLRPFLL 762
Query: 393 RRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGV 452
RRLK DV + L P Q E V R A + + + A + +SD G
Sbjct: 763 RRLKKDVEKDL-PDKQ--ERVIKCR--FSALQAKLNKQLATHNKMV--VSDGK----GGK 811
Query: 453 LPQRQISNYFVQFRKIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFECTLERVIEELK 511
+ R +SN +Q RK+ NHP + ++ + R L A FE L+R++ + K
Sbjct: 812 VGMRGLSNMLMQLRKLCNHPFVFEQVEDQVNPGRGTNDLIWRTAGKFEL-LDRILPKFK 869
>UNIPROTKB|I3LQZ8 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:CT954235 EMBL:CU466964 Ensembl:ENSSSCT00000025402
Uniprot:I3LQZ8
Length = 1709
Score = 401 (146.2 bits), Expect = 8.3e-36, P = 8.3e-36
Identities = 100/272 (36%), Positives = 151/272 (55%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQL G+N+L + ILADEMGLGKTIQ I++L L H + GP LIV P
Sbjct: 472 LRDYQLEGLNWLAHSWCNRSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPL 531
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYS-RELSSLAKAGLPPPFNVLLVCYSLFERH 286
S L +W+RE + W P +V+ Y G + + RE + FN L+ Y + +
Sbjct: 532 STLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLKFNALITTYEILLK- 590
Query: 287 SVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDL 346
D+ +L W+ + +DEAH LK+ +S +K L+ +N RL++TGTPLQN L
Sbjct: 591 ------DKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDF--KSNHRLLITGTPLQNSL 642
Query: 347 HELWSLLEFMMPDLFAT-EDVDLKKLLNGEDRDL-IGRMKSILGPFILRRLKSDVMQQLV 404
ELWSLL F+MP+ F ED + +G+ R+ + +L PF+LRR+K DV + L
Sbjct: 643 KELWSLLHFIMPEKFEFWEDFEED---HGKGRENGYQSLHKVLEPFLLRRVKKDVEKSLP 699
Query: 405 PKIQWVEYVTMERPQEDAYR-VAIEEYRAVSR 435
K++ + V M Q+ Y+ + Y+A+++
Sbjct: 700 AKVEQILRVEMSALQKQYYKWILTRNYKALAK 731
>WB|WBGene00000482 [details] [associations]
symbol:chd-3 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=TAS]
[GO:0040027 "negative regulation of vulval development"
evidence=IMP] [GO:0046580 "negative regulation of Ras protein
signal transduction" evidence=IMP] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0000118 "histone deacetylase
complex" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=TAS] [GO:0003678 "DNA helicase activity" evidence=ISS]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003682 GO:GO:0006338
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0001709 GO:GO:0046580 GO:GO:0008026 InterPro:IPR023780
PROSITE:PS00598 GO:GO:0000118 GeneTree:ENSGT00560000076896
EMBL:AF308444 EMBL:Z67884 EMBL:Z67881 PIR:T20160 RefSeq:NP_510140.1
UniGene:Cel.16950 ProteinModelPortal:Q22516 SMR:Q22516
STRING:Q22516 PaxDb:Q22516 EnsemblMetazoa:T14G8.1 GeneID:181421
KEGG:cel:CELE_T14G8.1 UCSC:T14G8.1 CTD:181421 WormBase:T14G8.1
HOGENOM:HOG000231124 InParanoid:Q22516 OMA:INIIMEL NextBio:913870
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
Uniprot:Q22516
Length = 1787
Score = 401 (146.2 bits), Expect = 8.8e-36, P = 8.8e-36
Identities = 113/340 (33%), Positives = 169/340 (49%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L PYQL G+N+L + G AILADEMGLGKT+Q++T+L L + GP LI P
Sbjct: 616 LHPYQLEGINWLRHCWSNG-TDAILADEMGLGKTVQSLTFLYTLMKEGHTKGPFLIAAPL 674
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAY---SRELSSL--AKAGLPP----------P 272
S + NWERE + WCP F V+ Y G + E S + A G P
Sbjct: 675 STIINWEREAELWCPDFYVVTYVGDRESRMVIREHEFSFVDGAVRGGPKVSKIKTLENLK 734
Query: 273 FNVLLVCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNAN 332
F+VLL Y D+ IL W+ +++DEAH LK+ S +KNL N
Sbjct: 735 FHVLLTSYECINM-------DKAILSSIDWAALVVDEAHRLKNNQSTFFKNLREY--NIQ 785
Query: 333 QRLMLTGTPLQNDLHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFIL 392
R++LTGTPLQN+L EL+ LL F+ PD F + + D I ++ ++LGP +L
Sbjct: 786 YRVLLTGTPLQNNLEELFHLLNFLAPDRFNQLESFTAEFSEISKEDQIEKLHNLLGPHML 845
Query: 393 RRLKSDVMQQLVPKIQWVEYVTMERPQEDAYR-VAIEEYRAVSRARIAKLSDADLATIVG 451
RRLK+DV+ + K + + V + Q+ Y+ + + A++ K ++ I
Sbjct: 846 RRLKADVLTGMPSKQELIVRVELSAMQKKYYKNILTRNFDALN----VKNGGTQMSLINI 901
Query: 452 VLPQRQISNYFVQFRKIA-NHPLLVRRIYSDDDVVRFAKK 490
++ ++ N+ F K P L +Y +++ A K
Sbjct: 902 IMELKKCCNHPYLFMKACLEAPKLKNGMYEGSALIKNAGK 941
>UNIPROTKB|Q22516 [details] [associations]
symbol:chd-3 "Chromodomain-helicase-DNA-binding protein 3
homolog" species:6239 "Caenorhabditis elegans" [GO:0032508 "DNA
duplex unwinding" evidence=ISS] InterPro:IPR001841
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003682 GO:GO:0006338 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0001709 GO:GO:0046580
GO:GO:0008026 InterPro:IPR023780 PROSITE:PS00598 GO:GO:0000118
GeneTree:ENSGT00560000076896 EMBL:AF308444 EMBL:Z67884 EMBL:Z67881
PIR:T20160 RefSeq:NP_510140.1 UniGene:Cel.16950
ProteinModelPortal:Q22516 SMR:Q22516 STRING:Q22516 PaxDb:Q22516
EnsemblMetazoa:T14G8.1 GeneID:181421 KEGG:cel:CELE_T14G8.1
UCSC:T14G8.1 CTD:181421 WormBase:T14G8.1 HOGENOM:HOG000231124
InParanoid:Q22516 OMA:INIIMEL NextBio:913870 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 Uniprot:Q22516
Length = 1787
Score = 401 (146.2 bits), Expect = 8.8e-36, P = 8.8e-36
Identities = 113/340 (33%), Positives = 169/340 (49%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L PYQL G+N+L + G AILADEMGLGKT+Q++T+L L + GP LI P
Sbjct: 616 LHPYQLEGINWLRHCWSNG-TDAILADEMGLGKTVQSLTFLYTLMKEGHTKGPFLIAAPL 674
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAY---SRELSSL--AKAGLPP----------P 272
S + NWERE + WCP F V+ Y G + E S + A G P
Sbjct: 675 STIINWEREAELWCPDFYVVTYVGDRESRMVIREHEFSFVDGAVRGGPKVSKIKTLENLK 734
Query: 273 FNVLLVCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNAN 332
F+VLL Y D+ IL W+ +++DEAH LK+ S +KNL N
Sbjct: 735 FHVLLTSYECINM-------DKAILSSIDWAALVVDEAHRLKNNQSTFFKNLREY--NIQ 785
Query: 333 QRLMLTGTPLQNDLHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFIL 392
R++LTGTPLQN+L EL+ LL F+ PD F + + D I ++ ++LGP +L
Sbjct: 786 YRVLLTGTPLQNNLEELFHLLNFLAPDRFNQLESFTAEFSEISKEDQIEKLHNLLGPHML 845
Query: 393 RRLKSDVMQQLVPKIQWVEYVTMERPQEDAYR-VAIEEYRAVSRARIAKLSDADLATIVG 451
RRLK+DV+ + K + + V + Q+ Y+ + + A++ K ++ I
Sbjct: 846 RRLKADVLTGMPSKQELIVRVELSAMQKKYYKNILTRNFDALN----VKNGGTQMSLINI 901
Query: 452 VLPQRQISNYFVQFRKIA-NHPLLVRRIYSDDDVVRFAKK 490
++ ++ N+ F K P L +Y +++ A K
Sbjct: 902 IMELKKCCNHPYLFMKACLEAPKLKNGMYEGSALIKNAGK 941
>UNIPROTKB|O14647 [details] [associations]
symbol:CHD2 "Chromodomain-helicase-DNA-binding protein 2"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=TAS] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=TAS] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0006357 GO:GO:0004003 EMBL:CH471101
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 HOVERGEN:HBG005325
InterPro:IPR025260 Pfam:PF13907 KO:K11367 HOGENOM:HOG000207917
EMBL:AF006514 EMBL:BT007050 EMBL:FJ515838 EMBL:AC013394
EMBL:BC007347 EMBL:CR978407 IPI:IPI00023109 IPI:IPI00815893
RefSeq:NP_001036037.1 RefSeq:NP_001262.3 UniGene:Hs.220864
ProteinModelPortal:O14647 SMR:O14647 IntAct:O14647 STRING:O14647
PhosphoSite:O14647 PaxDb:O14647 PRIDE:O14647 DNASU:1106
Ensembl:ENST00000394196 Ensembl:ENST00000420239
Ensembl:ENST00000557381 GeneID:1106 KEGG:hsa:1106 UCSC:uc002bso.1
UCSC:uc002bsp.3 CTD:1106 GeneCards:GC15P093533 HGNC:HGNC:1917
MIM:602119 neXtProt:NX_O14647 PharmGKB:PA26453 InParanoid:O14647
OMA:AHSWCKN OrthoDB:EOG4QRH36 ChiTaRS:CHD2 GenomeRNAi:1106
NextBio:4584 ArrayExpress:O14647 Bgee:O14647 CleanEx:HS_CHD2
Genevestigator:O14647 GermOnline:ENSG00000173575 Uniprot:O14647
Length = 1828
Score = 401 (146.2 bits), Expect = 9.1e-36, P = 9.1e-36
Identities = 101/272 (37%), Positives = 153/272 (56%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQL G+N+L + K + ILADEMGLGKTIQ I++L L H + GP LIV P
Sbjct: 484 LRDYQLEGLNWLAHSWCKNNS-VILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPL 542
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYS-RELSSLAKAGLPPPFNVLLVCYSLFERH 286
S L +W+RE + W P +V+ Y G + + RE + FN L+ Y + +
Sbjct: 543 STLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLKFNALITTYEILLK- 601
Query: 287 SVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDL 346
D+ +L W+ + +DEAH LK+ +S +K L+ +N RL++TGTPLQN L
Sbjct: 602 ------DKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDF--KSNHRLLITGTPLQNSL 653
Query: 347 HELWSLLEFMMPDLFAT-EDVDLKKLLNGEDRDL-IGRMKSILGPFILRRLKSDVMQQLV 404
ELWSLL F+MP+ F ED + +G+ R+ + +L PF+LRR+K DV + L
Sbjct: 654 KELWSLLHFIMPEKFEFWEDFEED---HGKGRENGYQSLHKVLEPFLLRRVKKDVEKSLP 710
Query: 405 PKIQWVEYVTMERPQEDAYR-VAIEEYRAVSR 435
K++ + V M Q+ Y+ + Y+A+++
Sbjct: 711 AKVEQILRVEMSALQKQYYKWILTRNYKALAK 742
>UNIPROTKB|F1SA77 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AHSWCKN EMBL:CT954235 EMBL:CU466964 Ensembl:ENSSSCT00000002524
Uniprot:F1SA77
Length = 1831
Score = 401 (146.2 bits), Expect = 9.1e-36, P = 9.1e-36
Identities = 101/272 (37%), Positives = 153/272 (56%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQL G+N+L + K + ILADEMGLGKTIQ I++L L H + GP LIV P
Sbjct: 486 LRDYQLEGLNWLAHSWCKSNS-VILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPL 544
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYS-RELSSLAKAGLPPPFNVLLVCYSLFERH 286
S L +W+RE + W P +V+ Y G + + RE + FN L+ Y + +
Sbjct: 545 STLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLKFNALITTYEILLK- 603
Query: 287 SVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDL 346
D+ +L W+ + +DEAH LK+ +S +K L+ +N RL++TGTPLQN L
Sbjct: 604 ------DKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDF--KSNHRLLITGTPLQNSL 655
Query: 347 HELWSLLEFMMPDLFAT-EDVDLKKLLNGEDRDL-IGRMKSILGPFILRRLKSDVMQQLV 404
ELWSLL F+MP+ F ED + +G+ R+ + +L PF+LRR+K DV + L
Sbjct: 656 KELWSLLHFIMPEKFEFWEDFEED---HGKGRENGYQSLHKVLEPFLLRRVKKDVEKSLP 712
Query: 405 PKIQWVEYVTMERPQEDAYR-VAIEEYRAVSR 435
K++ + V M Q+ Y+ + Y+A+++
Sbjct: 713 AKVEQILRVEMSALQKQYYKWILTRNYKALAK 744
>RGD|1306794 [details] [associations]
symbol:Chd1 "chromodomain helicase DNA binding protein 1"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=ISO]
[GO:0035064 "methylated histone residue binding" evidence=ISO]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1306794 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0006338 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 GeneTree:ENSGT00560000076896 OrthoDB:EOG4PG601
IPI:IPI00767719 Ensembl:ENSRNOT00000019358 UCSC:RGD:1306794
Uniprot:D4AAG9
Length = 904
Score = 395 (144.1 bits), Expect = 1.1e-35, P = 1.1e-35
Identities = 101/275 (36%), Positives = 155/275 (56%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQL G+N+L + KG + ILADEMGLGKTIQ I++L L H + GP L+V P
Sbjct: 479 LRDYQLNGLNWLAHSWCKGNS-CILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPL 537
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPP----FNVLLVCYSLF 283
S L +W+RE++ W + + Y G SR + + P FN+LL Y +
Sbjct: 538 STLTSWQREIQTWASQMNAVVYLG---DINSRNMIRTHEWMHPQTKRLKFNILLTTYEIL 594
Query: 284 ERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQ 343
+ D+ L W+ + +DEAH LK+ +S +K L+ +N RL++TGTPLQ
Sbjct: 595 LK-------DKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDF--KSNHRLLITGTPLQ 645
Query: 344 NDLHELWSLLEFMMPDLFAT-EDVDLKKLLNGEDRDL-IGRMKSILGPFILRRLKSDVMQ 401
N L ELWSLL F+MP+ F++ ED + + +G+ R+ + L PF+LRR+K DV +
Sbjct: 646 NSLKELWSLLHFIMPEKFSSWEDFEEE---HGKGREYGYASLHKELEPFLLRRVKKDVEK 702
Query: 402 QLVPKIQWVEYVTMERPQEDAYR-VAIEEYRAVSR 435
L K++ + + M Q+ Y+ + Y+A+S+
Sbjct: 703 SLPAKVEQILRMEMSALQKQYYKWILTRNYKALSK 737
>UNIPROTKB|D4AD08 [details] [associations]
symbol:Chd2 "Chromodomain helicase DNA binding protein 2
(Predicted)" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 EMBL:CH473980
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 KO:K11367 CTD:1106 OrthoDB:EOG4QRH36
IPI:IPI00778855 RefSeq:NP_001100993.1 UniGene:Rn.225034
Ensembl:ENSRNOT00000055829 GeneID:308738 KEGG:rno:308738
RGD:1310056 NextBio:659434 Uniprot:D4AD08
Length = 1834
Score = 400 (145.9 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 101/272 (37%), Positives = 153/272 (56%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQL G+N+L + K + ILADEMGLGKTIQ I++L L H + GP LIV P
Sbjct: 491 LRDYQLEGLNWLAHSWCKSNS-VILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPL 549
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYS-RELSSLAKAGLPPPFNVLLVCYSLFERH 286
S L +W+RE + W P +V+ Y G + + RE + FN L+ Y + +
Sbjct: 550 STLTSWQREFEIWAPEVNVVVYIGDLMSRNTIREYEWIHSQTKRLKFNALITTYEILLK- 608
Query: 287 SVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDL 346
D+ +L W+ + +DEAH LK+ +S +K L+ +N RL++TGTPLQN L
Sbjct: 609 ------DKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDF--KSNHRLLITGTPLQNSL 660
Query: 347 HELWSLLEFMMPDLFAT-EDVDLKKLLNGEDRDL-IGRMKSILGPFILRRLKSDVMQQLV 404
ELWSLL F+MP+ F ED + +G+ R+ + +L PF+LRR+K DV + L
Sbjct: 661 KELWSLLHFIMPEKFEFWEDFEED---HGKGRENGYQSLHKVLEPFLLRRVKKDVEKSLP 717
Query: 405 PKIQWVEYVTMERPQEDAYR-VAIEEYRAVSR 435
K++ + V M Q+ Y+ + Y+A+++
Sbjct: 718 AKVEQILRVEMSALQKQYYKWILTRNYKALAK 749
Score = 232 (86.7 bits), Expect = 3.2e-14, Sum P(2) = 3.2e-14
Identities = 63/187 (33%), Positives = 100/187 (53%)
Query: 293 DRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSL 352
D+ +L W+ + +DEAH LK+ +S +K L+ +N RL++TGTPLQN L ELWSL
Sbjct: 609 DKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDF--KSNHRLLITGTPLQNSLKELWSL 666
Query: 353 LEFMMPDLFAT-EDVDLKKLLNGEDRDL-IGRMKSILGPFILRRLKSDVMQQLVPKIQWV 410
L F+MP+ F ED + +G+ R+ + +L PF+LRR+K DV + L K++ +
Sbjct: 667 LHFIMPEKFEFWEDFEED---HGKGRENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQI 723
Query: 411 EYVTMERPQEDAYR-VAIEEYRAVSRARIAKLSDADLATIVGVLPQRQISNYFVQFRKIA 469
V M Q+ Y+ + Y+A+++ S G L N ++ +K
Sbjct: 724 LRVEMSALQKQYYKWILTRNYKALAKGTRGSTS--------GFL------NIVMELKKCC 769
Query: 470 NHPLLVR 476
NH L+R
Sbjct: 770 NHCYLIR 776
Score = 37 (18.1 bits), Expect = 3.2e-14, Sum P(2) = 3.2e-14
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 270 PPPFNVLLVCYSLFERHSVQQKDDRKILKRWRW 302
P FN+ S E S +++ R++ K+ +W
Sbjct: 119 PSRFNIKEEASSGSESGSPKRRGQRQLKKQEKW 151
>SGD|S000001388 [details] [associations]
symbol:STH1 "ATPase component of the RSC chromatin remodeling
complex" species:4932 "Saccharomyces cerevisiae" [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0007126 "meiosis" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA;IDA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;IMP] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IDA] [GO:0006337 "nucleosome
disassembly" evidence=IDA] [GO:0016584 "nucleosome positioning"
evidence=IMP] [GO:0007010 "cytoskeleton organization"
evidence=IGI;IMP] [GO:0031055 "chromatin remodeling at centromere"
evidence=IMP] [GO:0007059 "chromosome segregation" evidence=IGI]
[GO:0016586 "RSC complex" evidence=IDA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IDA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000086 "G2/M transition of mitotic cell cycle" evidence=IMP]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IMP] [GO:0015616 "DNA translocase activity" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SGD:S000001388 GO:GO:0005524 GO:GO:0007126 GO:GO:0000086
GO:GO:0007010 GO:GO:0007059 GO:GO:0000775 GO:GO:0006355
EMBL:BK006942 GO:GO:0006302 GO:GO:0004386 GO:GO:0006368
GO:GO:0006337 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016586 GO:GO:0043044 GO:GO:0016584
EMBL:DQ115392 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
GO:GO:0070577 InterPro:IPR018359 EMBL:Z46833 InterPro:IPR014012
PROSITE:PS51204 GeneTree:ENSGT00670000098110 HOGENOM:HOG000172362
GO:GO:0015616 GO:GO:0031055 KO:K11786 OrthoDB:EOG4D565R EMBL:D10595
EMBL:M83755 PIR:S49883 RefSeq:NP_012140.1 ProteinModelPortal:P32597
SMR:P32597 DIP:DIP-5889N IntAct:P32597 MINT:MINT-615490
STRING:P32597 PaxDb:P32597 PeptideAtlas:P32597 EnsemblFungi:YIL126W
GeneID:854680 KEGG:sce:YIL126W CYGD:YIL126w OMA:MEDFLRM
NextBio:977286 Genevestigator:P32597 GermOnline:YIL126W
Uniprot:P32597
Length = 1359
Score = 398 (145.2 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 119/359 (33%), Positives = 184/359 (51%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
LK YQL G+ +++ LY + G ILADEMGLGKTIQ+I+ + L + D GP L++ P
Sbjct: 470 LKEYQLRGLEWMVSLYNNHLNG-ILADEMGLGKTIQSISLITYLYEVKKDIGPFLVIVPL 528
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
S + NW E +KW PS + + Y G +S L + G F+VLL Y +
Sbjct: 529 STITNWTLEFEKWAPSLNTIIYKGTPNQRHS--LQHQIRVG---NFDVLLTTYEYIIK-- 581
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
D+ +L + W+ +++DE H +K+ S + R N RL+LTGTPLQN+L
Sbjct: 582 -----DKSLLSKHDWAHMIIDEGHRMKNAQSKLSFTISHYYRTRN-RLILTGTPLQNNLP 635
Query: 348 ELWSLLEFMMPDLFAT----EDV---------DLKKLLNGEDRDL--IGRMKSILGPFIL 392
ELW+LL F++P +F + ED +KL E+ L I R+ +L PF+L
Sbjct: 636 ELWALLNFVLPKIFNSAKTFEDWFNTPFANTGTQEKLELTEEETLLIIRRLHKVLRPFLL 695
Query: 393 RRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGV 452
RRLK +V + L K++ V + Q+ Y+ ++ + A+ + + AT G+
Sbjct: 696 RRLKKEVEKDLPDKVEKVIKCKLSGLQQQLYQQMLK-HNALFVG-----AGTEGATKGGI 749
Query: 453 LPQRQISNYFVQFRKIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFECTLERVIEELK 511
+ ++N +Q RKI NHP + + + R L A FE L+RV+ + K
Sbjct: 750 ---KGLNNKIMQLRKICNHPFVFDEVEGVVNPSRGNSDLLFRVAGKFEL-LDRVLPKFK 804
>UNIPROTKB|E1BPM4 [details] [associations]
symbol:CHD7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060324 "face development" evidence=IEA] [GO:0060123
"regulation of growth hormone secretion" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0050890 "cognition"
evidence=IEA] [GO:0048844 "artery morphogenesis" evidence=IEA]
[GO:0048752 "semicircular canal morphogenesis" evidence=IEA]
[GO:0043584 "nose development" evidence=IEA] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030540 "female genitalia development" evidence=IEA]
[GO:0030217 "T cell differentiation" evidence=IEA] [GO:0021545
"cranial nerve development" evidence=IEA] [GO:0008015 "blood
circulation" evidence=IEA] [GO:0007628 "adult walking behavior"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0007512 "adult heart development" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0003007 "heart morphogenesis" evidence=IEA] [GO:0001701 "in
utero embryonic development" evidence=IEA] [GO:0001501 "skeletal
system development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 SMART:SM00717 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0008015
GO:GO:0003007 GO:GO:0050890 GO:GO:0001701 GO:GO:0040018
GO:GO:0007417 GO:GO:0003682 GO:GO:0001501 GO:GO:0060041
GO:GO:0007605 GO:GO:0007512 GO:GO:0004386 GO:GO:0035116
GO:GO:0060324 GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0030540 GO:GO:0007628 GO:GO:0030217 GO:GO:0048752
InterPro:IPR023780 OMA:TFGVIFD GO:GO:0021545 GO:GO:0043584
GO:GO:0060123 GeneTree:ENSGT00560000077077 EMBL:DAAA02038386
EMBL:DAAA02038387 EMBL:DAAA02038388 IPI:IPI00697020
Ensembl:ENSBTAT00000026607 Uniprot:E1BPM4
Length = 2940
Score = 402 (146.6 bits), Expect = 1.3e-35, P = 1.3e-35
Identities = 110/343 (32%), Positives = 182/343 (53%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQL GVN+LL + + ILADEMGLGKTIQ+IT+L + +L GP L++ P
Sbjct: 918 LREYQLEGVNWLLFNWYN-MRNCILADEMGLGKTIQSITFLYEI-YLKGIHGPFLVIAPL 975
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
S + NWERE + W +V+ YHG+ A R + P V+ Y +
Sbjct: 976 STIPNWEREFRTWT-ELNVVVYHGS--QASRRTIQLYEMYFKDPQGRVIKGSYKFHAIIT 1032
Query: 288 VQQK--DDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
+ D L+ W CV++DEAH LK++N + L + + +++LTGTPLQN
Sbjct: 1033 TFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMM--DLEHKVLLTGTPLQNT 1090
Query: 346 LHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFILRRLKSDVMQQLVP 405
+ EL+SLL F+ P F +E +++ + + + + ++++IL P +LRRLK DV + L P
Sbjct: 1091 VEELFSLLHFLEPTRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAP 1150
Query: 406 KIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQISNYFVQF 465
K + + V + Q+ YR +E+ + A ++K A + +L N ++
Sbjct: 1151 KEETIIEVELTNIQKKYYRAILEK----NFAFLSK--GGGQANVPNLL------NTMMEL 1198
Query: 466 RKIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFECTLERVIE 508
RK NHP L+ +++ ++ K+ H + F+ L+ +I+
Sbjct: 1199 RKCCNHPYLING--AEEKILEEFKETHNADSPDFQ--LQAMIQ 1237
>RGD|1311935 [details] [associations]
symbol:Chd1l "chromodomain helicase DNA binding protein 1-like"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 RGD:1311935 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003677
GO:GO:0006974 GO:GO:0016887 GO:GO:0006338 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589
PROSITE:PS51154 OrthoDB:EOG4SXNBV GeneTree:ENSGT00670000098110
IPI:IPI00560655 Ensembl:ENSRNOT00000043937 UCSC:RGD:1311935
ArrayExpress:D4ACG6 Uniprot:D4ACG6
Length = 903
Score = 394 (143.8 bits), Expect = 1.4e-35, P = 1.4e-35
Identities = 99/263 (37%), Positives = 143/263 (54%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQL GVN+L+ + G G IL DEMGLGKT Q I L+ L ND GP LI+CP
Sbjct: 40 LRSYQLEGVNWLVQCFH-GQNGCILGDEMGLGKTCQTIALLIYLVGRLNDEGPFLILCPL 98
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
SVL NW+ E++++ P S + Y G R+ ++G F+VLL Y + +
Sbjct: 99 SVLSNWKEEMERFAPGLSCVTYTGDKEERARRQQDLRQESG----FHVLLTTYEICLK-- 152
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
D LK + WS + +DEAH LK+++S + L + RL+LTGTP+QN L
Sbjct: 153 -----DASFLKSFSWSVLAVDEAHRLKNQSSLLHRTLSEFS--VVFRLLLTGTPIQNSLQ 205
Query: 348 ELWSLLEFMMPDLFATEDV-DLKKLLNGEDRDL--IGRMKSILGPFILRRLKSDVMQQLV 404
EL+SLL + PDLF E V D + +++ + +L PF+LRR+K+ V +L
Sbjct: 206 ELYSLLSVVEPDLFCREQVEDFVQCYQDIEKESKSASELHRLLRPFLLRRVKAQVATELP 265
Query: 405 PKIQWVEYVTMERPQEDAYRVAI 427
K + V Y M Q+ Y+ +
Sbjct: 266 KKTEVVIYHGMSALQKKYYKAIL 288
Score = 205 (77.2 bits), Expect = 5.3e-13, P = 5.3e-13
Identities = 60/185 (32%), Positives = 91/185 (49%)
Query: 293 DRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSL 352
D LK + WS + +DEAH LK+++S + L + RL+LTGTP+QN L EL+SL
Sbjct: 153 DASFLKSFSWSVLAVDEAHRLKNQSSLLHRTLSEFS--VVFRLLLTGTPIQNSLQELYSL 210
Query: 353 LEFMMPDLFATEDV-DLKKLLNGEDRDL--IGRMKSILGPFILRRLKSDVMQQLVPKIQW 409
L + PDLF E V D + +++ + +L PF+LRR+K+ V +L K +
Sbjct: 211 LSVVEPDLFCREQVEDFVQCYQDIEKESKSASELHRLLRPFLLRRVKAQVATELPKKTEV 270
Query: 410 VEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQISNYFVQFRKIA 469
V Y M Q+ Y+ + + D D A + ++ N Q RK
Sbjct: 271 VIYHGMSALQKKYYKAIL-------------MKDLD-AFENETAKKVKLQNVLTQLRKCV 316
Query: 470 NHPLL 474
+HP L
Sbjct: 317 DHPYL 321
>UNIPROTKB|F1NSG3 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008015 "blood circulation" evidence=IEA] [GO:0021545 "cranial
nerve development" evidence=IEA] [GO:0030217 "T cell
differentiation" evidence=IEA] [GO:0030540 "female genitalia
development" evidence=IEA] [GO:0035116 "embryonic hindlimb
morphogenesis" evidence=IEA] [GO:0040018 "positive regulation of
multicellular organism growth" evidence=IEA] [GO:0043584 "nose
development" evidence=IEA] [GO:0048752 "semicircular canal
morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0050890 "cognition" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0060041 "retina development
in camera-type eye" evidence=IEA] [GO:0060123 "regulation of growth
hormone secretion" evidence=IEA] [GO:0060324 "face development"
evidence=IEA] [GO:0001501 "skeletal system development"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0003007 "heart morphogenesis" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0007512 "adult heart development" evidence=IEA] [GO:0007605
"sensory perception of sound" evidence=IEA] [GO:0007628 "adult
walking behavior" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 SMART:SM00717 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0040018 GO:GO:0003682
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 IPI:IPI00590082
OMA:TFGVIFD GO:GO:0060123 GeneTree:ENSGT00560000077077
EMBL:AADN02022009 EMBL:AADN02022010 Ensembl:ENSGALT00000024950
ArrayExpress:F1NSG3 Uniprot:F1NSG3
Length = 2248
Score = 400 (145.9 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 110/343 (32%), Positives = 181/343 (52%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQL GVN+LL + ILADEMGLGKTIQ+IT+L + +L GP L++ P
Sbjct: 206 LREYQLEGVNWLLFNWYN-TRNCILADEMGLGKTIQSITFLYEI-YLKGIHGPFLVIAPL 263
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
S + NWERE + W +V+ YHG+ A R + P V+ Y +
Sbjct: 264 STIPNWEREFRTWT-ELNVVVYHGS--QASRRTIQLYEMYFKDPQGRVIKGSYKFHAIIT 320
Query: 288 VQQK--DDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
+ D L+ W CV++DEAH LK++N + L + + +++LTGTPLQN
Sbjct: 321 TFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMM--DLEHKVLLTGTPLQNT 378
Query: 346 LHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFILRRLKSDVMQQLVP 405
+ EL+SLL F+ P F +E +++ + + + + ++++IL P +LRRLK DV + L P
Sbjct: 379 VEELFSLLHFLEPGRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAP 438
Query: 406 KIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQISNYFVQF 465
K + + V + Q+ YR +E+ + A ++K A + +L N ++
Sbjct: 439 KEETIIEVELTNIQKKYYRAILEK----NFAFLSK--GGGQANVPNLL------NTMMEL 486
Query: 466 RKIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFECTLERVIE 508
RK NHP L+ +++ ++ K+ H + F+ L+ +I+
Sbjct: 487 RKCCNHPYLING--AEEKILEEFKETHNADSPDFQ--LQAMIQ 525
>UNIPROTKB|J9NSS6 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
GeneTree:ENSGT00560000076896 EMBL:AAEX03002279 EMBL:AAEX03002280
Ensembl:ENSCAFT00000043290 Uniprot:J9NSS6
Length = 1379
Score = 396 (144.5 bits), Expect = 2.0e-35, P = 2.0e-35
Identities = 100/272 (36%), Positives = 153/272 (56%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQL G+N+L + K + ILADEMGLGKTIQ I++L L H + GP LIV P
Sbjct: 484 LRDYQLEGLNWLAHSWCKSNS-VILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPL 542
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYS-RELSSLAKAGLPPPFNVLLVCYSLFERH 286
S L +W+RE + W P +V+ Y G + + RE + FN L+ Y + +
Sbjct: 543 STLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLKFNALITTYEILLK- 601
Query: 287 SVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDL 346
D+ +L W+ + +DEAH LK+ +S +K L+ ++ RL++TGTPLQN L
Sbjct: 602 ------DKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDF--KSHHRLLITGTPLQNSL 653
Query: 347 HELWSLLEFMMPDLFAT-EDVDLKKLLNGEDRDL-IGRMKSILGPFILRRLKSDVMQQLV 404
ELWSLL F+MP+ F ED + +G+ R+ + +L PF+LRR+K DV + L
Sbjct: 654 KELWSLLHFIMPEKFEFWEDFEED---HGKGRENGYQSLHKVLEPFLLRRVKKDVEKSLP 710
Query: 405 PKIQWVEYVTMERPQEDAYR-VAIEEYRAVSR 435
K++ + V M Q+ Y+ + Y+A+++
Sbjct: 711 AKVEQILRVEMSALQKQYYKWILTRNYKALAK 742
>UNIPROTKB|F1RT88 [details] [associations]
symbol:CHD7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060324 "face development" evidence=IEA] [GO:0060123
"regulation of growth hormone secretion" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0050890 "cognition"
evidence=IEA] [GO:0048844 "artery morphogenesis" evidence=IEA]
[GO:0048752 "semicircular canal morphogenesis" evidence=IEA]
[GO:0043584 "nose development" evidence=IEA] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030540 "female genitalia development" evidence=IEA]
[GO:0030217 "T cell differentiation" evidence=IEA] [GO:0021545
"cranial nerve development" evidence=IEA] [GO:0008015 "blood
circulation" evidence=IEA] [GO:0007628 "adult walking behavior"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0007512 "adult heart development" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0003007 "heart morphogenesis" evidence=IEA] [GO:0001701 "in
utero embryonic development" evidence=IEA] [GO:0001501 "skeletal
system development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 SMART:SM00717 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0008015
GO:GO:0003007 GO:GO:0050890 GO:GO:0001701 GO:GO:0040018
GO:GO:0007417 GO:GO:0003682 GO:GO:0001501 GO:GO:0060041
GO:GO:0007605 GO:GO:0007512 GO:GO:0004386 GO:GO:0035116
GO:GO:0060324 GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0030540 GO:GO:0007628 GO:GO:0030217 GO:GO:0048752
InterPro:IPR023780 OMA:TFGVIFD GO:GO:0021545 GO:GO:0043584
GO:GO:0060123 GeneTree:ENSGT00560000077077 EMBL:CU179734
Ensembl:ENSSSCT00000006828 Uniprot:F1RT88
Length = 2991
Score = 400 (145.9 bits), Expect = 2.2e-35, P = 2.2e-35
Identities = 109/344 (31%), Positives = 181/344 (52%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQL GVN+LL + + ILADEMGLGKTIQ+IT+L + +L GP L++ P
Sbjct: 961 LREYQLEGVNWLLFNWYN-MRNCILADEMGLGKTIQSITFLYEI-YLKGIHGPFLVIAPL 1018
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
S + NWERE + W +V+ YHG+ A R + P V+ Y +
Sbjct: 1019 STIPNWEREFRTWT-ELNVVVYHGS--QASRRTIQLYEMYFKDPQGRVIKGSYKFHAIIT 1075
Query: 288 VQQK--DDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
+ D L+ W CV++DEAH LK++N + L + + +++LTGTPLQN
Sbjct: 1076 TFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMM--DLEHKVLLTGTPLQNT 1133
Query: 346 LHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFILRRLKSDVMQQLVP 405
+ EL+SLL F+ P F +E +++ + + + + ++++IL P +LRRLK DV + L P
Sbjct: 1134 VEELFSLLHFLEPSRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAP 1193
Query: 406 KIQWVEYVTMERPQEDAYRVAIEE-YRAVSRARIAKLSDADLATIVGVLPQRQISNYFVQ 464
K + + V + Q+ YR +E+ + +S+ A + +L N ++
Sbjct: 1194 KEETIIEVELTNIQKKYYRAILEKNFTFLSKG-------GGQANVPNLL------NTMME 1240
Query: 465 FRKIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFECTLERVIE 508
RK NHP L+ +++ ++ K+ H + F+ L+ +I+
Sbjct: 1241 LRKCCNHPYLING--AEEKILEEFKETHNADSPDFQ--LQAMIQ 1280
>WB|WBGene00010369 [details] [associations]
symbol:chd-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0003677
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
KO:K11367 HOGENOM:HOG000207917 OMA:VERVIKW EMBL:Z92970 PIR:T23056
RefSeq:NP_491994.2 ProteinModelPortal:O17909 SMR:O17909
STRING:O17909 PaxDb:O17909 EnsemblMetazoa:H06O01.2 GeneID:172432
KEGG:cel:CELE_H06O01.2 UCSC:H06O01.2 CTD:172432 WormBase:H06O01.2
InParanoid:O17909 NextBio:875487 Uniprot:O17909
Length = 1461
Score = 396 (144.5 bits), Expect = 2.2e-35, P = 2.2e-35
Identities = 96/278 (34%), Positives = 150/278 (53%)
Query: 161 DSDFQPVLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGP 220
D + L+ YQL G+N+++ + KG + +ILADEMGLGKTIQ+I+ L L H + GP
Sbjct: 398 DGESTHKLRDYQLEGLNWMVYAWCKGNS-SILADEMGLGKTIQSISLLASLFHRYDLAGP 456
Query: 221 HLIVCPASVLENWERELKKWCPSFSVLQYHG--AGRTAYSRELSSLAKAGLPPPFNVLLV 278
+L+V P S + W++E +W P +++ Y G R R+ N +L
Sbjct: 457 YLVVVPLSTMAAWQKEFAQWAPEMNLVVYMGDVVSRDMI-RQYEWFVGGTKKMKINAILT 515
Query: 279 CYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLT 338
Y + + D+ L W+ +L+DEAH LK+ S +K+L N +L++T
Sbjct: 516 TYEILLK-------DKAFLSSIDWAALLVDEAHRLKNDESLLYKSLTQF--RFNHKLLIT 566
Query: 339 GTPLQNDLHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFILRRLKSD 398
GTPLQN L ELW+LL F+MP+ F + + + N + I + L PF+LRR+K D
Sbjct: 567 GTPLQNSLKELWALLHFIMPEKFDCWE-EFETAHNESNHKGISALHKKLEPFLLRRVKKD 625
Query: 399 VMQQLVPKIQWVEYVTMERPQEDAYR-VAIEEYRAVSR 435
V + L PK + + V M Q+ Y+ + + YR +S+
Sbjct: 626 VEKSLPPKTEQILRVDMTAHQKQFYKWILTKNYRELSK 663
Score = 237 (88.5 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 72/224 (32%), Positives = 113/224 (50%)
Query: 293 DRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSL 352
D+ L W+ +L+DEAH LK+ S +K+L N +L++TGTPLQN L ELW+L
Sbjct: 523 DKAFLSSIDWAALLVDEAHRLKNDESLLYKSLTQF--RFNHKLLITGTPLQNSLKELWAL 580
Query: 353 LEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFILRRLKSDVMQQLVPKIQWVEY 412
L F+MP+ F + + + N + I + L PF+LRR+K DV + L PK + +
Sbjct: 581 LHFIMPEKFDCWE-EFETAHNESNHKGISALHKKLEPFLLRRVKKDVEKSLPPKTEQILR 639
Query: 413 VTMERPQEDAYR-VAIEEYRAVSRARIAKLSDADLATIVGVLPQRQISNYFVQFRKIANH 471
V M Q+ Y+ + + YR +S+ K +I G + N ++ +K NH
Sbjct: 640 VDMTAHQKQFYKWILTKNYRELSKG--VK------GSINGFV------NLVMELKKCCNH 685
Query: 472 PLLVRR---IYSDDDVVRFAKKLHPMGAFGFECTLERVIEELKN 512
L R+ IY DD R + L G L++++ LK+
Sbjct: 686 ASLTRQYDHIY-DDAQGRLQQLLKSSGKL---ILLDKLLCRLKD 725
>UNIPROTKB|Q06A37 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9031 "Gallus gallus" [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00592 SMART:SM00717
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
PROSITE:PS00598 HOVERGEN:HBG081150 EMBL:DQ978381 IPI:IPI00590082
RefSeq:NP_001071054.1 UniGene:Gga.20865 ProteinModelPortal:Q06A37
SMR:Q06A37 GeneID:421140 KEGG:gga:421140 CTD:55636
HOGENOM:HOG000246942 InParanoid:Q06A37 KO:K14437 OrthoDB:EOG4MCWZD
NextBio:20823957 Uniprot:Q06A37
Length = 3011
Score = 400 (145.9 bits), Expect = 2.2e-35, P = 2.2e-35
Identities = 110/343 (32%), Positives = 181/343 (52%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQL GVN+LL + ILADEMGLGKTIQ+IT+L + +L GP L++ P
Sbjct: 969 LREYQLEGVNWLLFNWYN-TRNCILADEMGLGKTIQSITFLYEI-YLKGIHGPFLVIAPL 1026
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
S + NWERE + W +V+ YHG+ A R + P V+ Y +
Sbjct: 1027 STIPNWEREFRTWT-ELNVVVYHGS--QASRRTIQLYEMYFKDPQGRVIKGSYKFHAIIT 1083
Query: 288 VQQK--DDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
+ D L+ W CV++DEAH LK++N + L + + +++LTGTPLQN
Sbjct: 1084 TFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMM--DLEHKVLLTGTPLQNT 1141
Query: 346 LHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFILRRLKSDVMQQLVP 405
+ EL+SLL F+ P F +E +++ + + + + ++++IL P +LRRLK DV + L P
Sbjct: 1142 VEELFSLLHFLEPGRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAP 1201
Query: 406 KIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQISNYFVQF 465
K + + V + Q+ YR +E+ + A ++K A + +L N ++
Sbjct: 1202 KEETIIEVELTNIQKKYYRAILEK----NFAFLSK--GGGQANVPNLL------NTMMEL 1249
Query: 466 RKIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFECTLERVIE 508
RK NHP L+ +++ ++ K+ H + F+ L+ +I+
Sbjct: 1250 RKCCNHPYLING--AEEKILEEFKETHNADSPDFQ--LQAMIQ 1288
>UNIPROTKB|F1MFS2 [details] [associations]
symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
1-like" species:9913 "Bos taurus" [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0006974
GO:GO:0006338 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR002589 PROSITE:PS51154 GO:GO:0008026 IPI:IPI00710168
OMA:TCQTIAL GeneTree:ENSGT00670000098110 EMBL:DAAA02007335
Ensembl:ENSBTAT00000027762 Uniprot:F1MFS2
Length = 896
Score = 392 (143.0 bits), Expect = 2.3e-35, P = 2.3e-35
Identities = 99/265 (37%), Positives = 149/265 (56%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+PYQL GVN+L + G IL DEMGLGKT Q I + L ND GP LI+CP
Sbjct: 48 LRPYQLQGVNWLAQCFHCQ-NGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLILCPL 106
Query: 228 SVLENWERELKKWCPSFSVLQYHGAG--RTAYSRELSSLAKAGLPPPFNVLLVCYSLFER 285
SVL NW+ E++++ P S + Y G R ++L ++ F+VLL Y + +
Sbjct: 107 SVLSNWKEEMERFAPGLSCVTYAGDKDKRACLQQDLKQESR------FHVLLTTYEICLK 160
Query: 286 HSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
D LK + WS +++DEAH LK+++S K L + + L+LTGTP+QN
Sbjct: 161 -------DASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFS--LLLTGTPIQNS 211
Query: 346 LHELWSLLEFMMPDLFATEDVD--LKKLLNGE-DRDLIGRMKSILGPFILRRLKSDVMQQ 402
L EL+SLL F+ PDLF+ E V+ +++ + E + + + +L PF+LRR+K++V +
Sbjct: 212 LQELYSLLSFVEPDLFSKEQVEDFVQRYQDIEKESESASELYKLLQPFLLRRVKAEVATE 271
Query: 403 LVPKIQWVEYVTMERPQEDAYRVAI 427
L K + V Y M Q+ Y+ +
Sbjct: 272 LPRKTEVVIYHGMSALQKKYYKAIL 296
Score = 217 (81.4 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 65/208 (31%), Positives = 108/208 (51%)
Query: 293 DRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSL 352
D LK + WS +++DEAH LK+++S K L + + L+LTGTP+QN L EL+SL
Sbjct: 161 DASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFS--LLLTGTPIQNSLQELYSL 218
Query: 353 LEFMMPDLFATEDVD--LKKLLNGE-DRDLIGRMKSILGPFILRRLKSDVMQQLVPKIQW 409
L F+ PDLF+ E V+ +++ + E + + + +L PF+LRR+K++V +L K +
Sbjct: 219 LSFVEPDLFSKEQVEDFVQRYQDIEKESESASELYKLLQPFLLRRVKAEVATELPRKTEV 278
Query: 410 VEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQISNYFVQFRKIA 469
V Y M Q+ Y+ + + D D A + + ++ N Q RK
Sbjct: 279 VIYHGMSALQKKYYKAIL-------------MKDLD-AFENEMAKKVKLQNVLSQLRKCV 324
Query: 470 NHPLLVRRIYSD-----DDVVRFAKKLH 492
+HP L + + D ++ + KLH
Sbjct: 325 DHPYLFDGVEPEPFEIGDHLIEASGKLH 352
>UNIPROTKB|Q3B7N1 [details] [associations]
symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
1-like" species:9913 "Bos taurus" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0000166 "nucleotide binding"
evidence=ISS] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0000166
GO:GO:0003677 GO:GO:0006281 GO:GO:0006974 GO:GO:0016887
GO:GO:0006338 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154
GO:GO:0008026 EMBL:BC107534 IPI:IPI00710168 RefSeq:NP_001032909.1
UniGene:Bt.18335 ProteinModelPortal:Q3B7N1 PRIDE:Q3B7N1
GeneID:524787 KEGG:bta:524787 CTD:9557 HOGENOM:HOG000030789
HOVERGEN:HBG077542 InParanoid:Q3B7N1 OrthoDB:EOG4SXNBV
NextBio:20874039 Uniprot:Q3B7N1
Length = 897
Score = 392 (143.0 bits), Expect = 2.3e-35, P = 2.3e-35
Identities = 99/265 (37%), Positives = 149/265 (56%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+PYQL GVN+L + G IL DEMGLGKT Q I + L ND GP LI+CP
Sbjct: 48 LRPYQLQGVNWLAQCFHCQ-NGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLILCPL 106
Query: 228 SVLENWERELKKWCPSFSVLQYHGAG--RTAYSRELSSLAKAGLPPPFNVLLVCYSLFER 285
SVL NW+ E++++ P S + Y G R ++L ++ F+VLL Y + +
Sbjct: 107 SVLSNWKEEMERFAPGLSCVTYAGDKDKRACLQQDLKQESR------FHVLLTTYEICLK 160
Query: 286 HSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
D LK + WS +++DEAH LK+++S K L + + L+LTGTP+QN
Sbjct: 161 -------DASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFS--LLLTGTPIQNS 211
Query: 346 LHELWSLLEFMMPDLFATEDVD--LKKLLNGE-DRDLIGRMKSILGPFILRRLKSDVMQQ 402
L EL+SLL F+ PDLF+ E V+ +++ + E + + + +L PF+LRR+K++V +
Sbjct: 212 LQELYSLLSFVEPDLFSKEQVEDFVQRYQDIEKESESASELYKLLQPFLLRRVKAEVATE 271
Query: 403 LVPKIQWVEYVTMERPQEDAYRVAI 427
L K + V Y M Q+ Y+ +
Sbjct: 272 LPRKTEVVIYHGMSALQKKYYKAIL 296
Score = 216 (81.1 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 65/208 (31%), Positives = 107/208 (51%)
Query: 293 DRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSL 352
D LK + WS +++DEAH LK+++S K L + + L+LTGTP+QN L EL+SL
Sbjct: 161 DASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFS--LLLTGTPIQNSLQELYSL 218
Query: 353 LEFMMPDLFATEDVD--LKKLLNGE-DRDLIGRMKSILGPFILRRLKSDVMQQLVPKIQW 409
L F+ PDLF+ E V+ +++ + E + + + +L PF+LRR+K++V +L K +
Sbjct: 219 LSFVEPDLFSKEQVEDFVQRYQDIEKESESASELYKLLQPFLLRRVKAEVATELPRKTEV 278
Query: 410 VEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQISNYFVQFRKIA 469
V Y M Q+ Y+ + + D D A + ++ N Q RK
Sbjct: 279 VIYHGMSALQKKYYKAIL-------------MKDLD-AFENETAKKVKLQNVLSQLRKCV 324
Query: 470 NHPLLVRRIYSD-----DDVVRFAKKLH 492
+HP L + + D ++ + KLH
Sbjct: 325 DHPYLFDGVEPEPFEIGDHLIEASGKLH 352
>UNIPROTKB|J9NX79 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:AAEX03002279 EMBL:AAEX03002280 Ensembl:ENSCAFT00000044612
Uniprot:J9NX79
Length = 1689
Score = 396 (144.5 bits), Expect = 2.8e-35, P = 2.8e-35
Identities = 100/272 (36%), Positives = 153/272 (56%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQL G+N+L + K + ILADEMGLGKTIQ I++L L H + GP LIV P
Sbjct: 453 LRDYQLEGLNWLAHSWCKSNS-VILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPL 511
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYS-RELSSLAKAGLPPPFNVLLVCYSLFERH 286
S L +W+RE + W P +V+ Y G + + RE + FN L+ Y + +
Sbjct: 512 STLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLKFNALITTYEILLK- 570
Query: 287 SVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDL 346
D+ +L W+ + +DEAH LK+ +S +K L+ ++ RL++TGTPLQN L
Sbjct: 571 ------DKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDF--KSHHRLLITGTPLQNSL 622
Query: 347 HELWSLLEFMMPDLFAT-EDVDLKKLLNGEDRDL-IGRMKSILGPFILRRLKSDVMQQLV 404
ELWSLL F+MP+ F ED + +G+ R+ + +L PF+LRR+K DV + L
Sbjct: 623 KELWSLLHFIMPEKFEFWEDFEED---HGKGRENGYQSLHKVLEPFLLRRVKKDVEKSLP 679
Query: 405 PKIQWVEYVTMERPQEDAYR-VAIEEYRAVSR 435
K++ + V M Q+ Y+ + Y+A+++
Sbjct: 680 AKVEQILRVEMSALQKQYYKWILTRNYKALAK 711
>MGI|MGI:2444748 [details] [associations]
symbol:Chd7 "chromodomain helicase DNA binding protein 7"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001501 "skeletal system development"
evidence=ISO] [GO:0001568 "blood vessel development" evidence=IMP]
[GO:0001701 "in utero embryonic development" evidence=ISO;IMP]
[GO:0003007 "heart morphogenesis" evidence=ISO;IMP] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007417 "central
nervous system development" evidence=ISO] [GO:0007512 "adult heart
development" evidence=IMP] [GO:0007605 "sensory perception of
sound" evidence=IMP] [GO:0007626 "locomotory behavior"
evidence=IMP] [GO:0007628 "adult walking behavior" evidence=IMP]
[GO:0008015 "blood circulation" evidence=IMP] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] [GO:0021545 "cranial nerve
development" evidence=ISO] [GO:0030217 "T cell differentiation"
evidence=ISO] [GO:0030540 "female genitalia development"
evidence=IMP] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IMP] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IMP] [GO:0042471 "ear morphogenesis"
evidence=IMP] [GO:0042472 "inner ear morphogenesis"
evidence=ISO;IMP] [GO:0043010 "camera-type eye development"
evidence=IMP] [GO:0043584 "nose development" evidence=ISO;IMP]
[GO:0048752 "semicircular canal morphogenesis" evidence=IGI]
[GO:0048806 "genitalia development" evidence=ISO] [GO:0048844
"artery morphogenesis" evidence=IGI] [GO:0050890 "cognition"
evidence=ISO] [GO:0060021 "palate development" evidence=ISO;IMP]
[GO:0060041 "retina development in camera-type eye" evidence=ISO]
[GO:0060123 "regulation of growth hormone secretion" evidence=ISO]
[GO:0060173 "limb development" evidence=ISO] [GO:0060324 "face
development" evidence=ISO] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 SMART:SM00717 MGI:MGI:2444748 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0008015 GO:GO:0003007 GO:GO:0050890 GO:GO:0001701
GO:GO:0040018 GO:GO:0007417 GO:GO:0006351 GO:GO:0003682
GO:GO:0016568 GO:GO:0043010 GO:GO:0001501 GO:GO:0060041
GO:GO:0007605 GO:GO:0007512 GO:GO:0004386 GO:GO:0035116
GO:GO:0060324 GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0030540 GO:GO:0007628 GO:GO:0030217
GO:GO:0048752 InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG081150
CTD:55636 HOGENOM:HOG000246942 KO:K14437 OrthoDB:EOG4MCWZD
OMA:TFGVIFD GO:GO:0021545 GO:GO:0043584 GO:GO:0060123 EMBL:AK042727
EMBL:AK171051 EMBL:AK171857 EMBL:AK172025 EMBL:AL732627
EMBL:AL805903 EMBL:BC034239 IPI:IPI00345676 IPI:IPI00666779
IPI:IPI00849588 RefSeq:NP_001074886.1 UniGene:Mm.138792
ProteinModelPortal:A2AJK6 SMR:A2AJK6 IntAct:A2AJK6 STRING:A2AJK6
PhosphoSite:A2AJK6 PaxDb:A2AJK6 PRIDE:A2AJK6
Ensembl:ENSMUST00000039267 Ensembl:ENSMUST00000051558
Ensembl:ENSMUST00000127476 GeneID:320790 KEGG:mmu:320790
UCSC:uc008rxy.1 UCSC:uc008rya.1 GeneTree:ENSGT00560000077077
InParanoid:A2AJK6 NextBio:397435 Bgee:A2AJK6 CleanEx:MM_CHD7
Genevestigator:A2AJK6 Uniprot:A2AJK6
Length = 2986
Score = 399 (145.5 bits), Expect = 2.8e-35, P = 2.8e-35
Identities = 106/328 (32%), Positives = 173/328 (52%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQL GVN+LL + + ILADEMGLGKTIQ+IT+L + +L GP L++ P
Sbjct: 958 LREYQLEGVNWLLFNWYN-MRNCILADEMGLGKTIQSITFLYEI-YLKGIHGPFLVIAPL 1015
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
S + NWERE + W +V+ YHG+ A R + P V+ Y +
Sbjct: 1016 STIPNWEREFRTWT-ELNVVVYHGS--QASRRTIQLYEMYFKDPQGRVIKGSYKFHAIIT 1072
Query: 288 VQQK--DDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
+ D L+ W CV++DEAH LK++N + L + + +++LTGTPLQN
Sbjct: 1073 TFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMM--DLEHKVLLTGTPLQNT 1130
Query: 346 LHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFILRRLKSDVMQQLVP 405
+ EL+SLL F+ P F +E +++ + + + + ++++IL P +LRRLK DV + L P
Sbjct: 1131 VEELFSLLHFLEPSRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAP 1190
Query: 406 KIQWVEYVTMERPQEDAYRVAIEE-YRAVSRARIAKLSDADLATIVGVLPQRQISNYFVQ 464
K + + V + Q+ YR +E+ + +S+ A + +L N ++
Sbjct: 1191 KEETIIEVELTNIQKKYYRAILEKNFTFLSKG-------GGQANVPNLL------NTMME 1237
Query: 465 FRKIANHPLLVRRIYSDDDVVRFAKKLH 492
RK NHP L+ +++ ++ K+ H
Sbjct: 1238 LRKCCNHPYLING--AEEKILEEFKETH 1263
>UNIPROTKB|Q9P2D1 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0007512 "adult heart development" evidence=IEA] [GO:0007605
"sensory perception of sound" evidence=IEA] [GO:0007628 "adult
walking behavior" evidence=IEA] [GO:0008015 "blood circulation"
evidence=IEA] [GO:0030540 "female genitalia development"
evidence=IEA] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IEA] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IEA] [GO:0048752 "semicircular canal
morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0001701 "in utero embryonic
development" evidence=IMP] [GO:0003007 "heart morphogenesis"
evidence=IMP] [GO:0042472 "inner ear morphogenesis" evidence=IMP]
[GO:0043584 "nose development" evidence=IMP] [GO:0048806 "genitalia
development" evidence=IMP] [GO:0060021 "palate development"
evidence=IMP] [GO:0060041 "retina development in camera-type eye"
evidence=IMP] [GO:0001501 "skeletal system development"
evidence=IMP] [GO:0050890 "cognition" evidence=IMP] [GO:0007417
"central nervous system development" evidence=IMP] [GO:0021545
"cranial nerve development" evidence=IMP] [GO:0060123 "regulation
of growth hormone secretion" evidence=IMP] [GO:0003682 "chromatin
binding" evidence=TAS] [GO:0030217 "T cell differentiation"
evidence=IMP] [GO:0060173 "limb development" evidence=IMP]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0060324 "face development" evidence=IMP]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00592 SMART:SM00717
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0008015 GO:GO:0003007 GO:GO:0050890
GO:GO:0001701 GO:GO:0040018 GO:GO:0007417 GO:GO:0006351
GO:GO:0003682 GO:GO:0016568 GO:GO:0048806 GO:GO:0042472
GO:GO:0001501 GO:GO:0060041 GO:GO:0007605 GO:GO:0007512
GO:GO:0004386 GO:GO:0035116 GO:GO:0060324 GO:GO:0060021
GO:GO:0060173 GO:GO:0048844 InterPro:IPR016197 SUPFAM:SSF54160
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0030540 GO:GO:0007628 GO:GO:0030217 GO:GO:0048752
InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG081150 CTD:55636
KO:K14437 OrthoDB:EOG4MCWZD EMBL:AC023102 EMBL:AC113143
EMBL:AB037837 EMBL:AK000364 EMBL:AK000368 EMBL:BC014681
EMBL:BC051264 EMBL:BC053890 EMBL:BC068000 EMBL:BC080627
EMBL:BC110818 IPI:IPI00472901 IPI:IPI00794880 RefSeq:NP_060250.2
UniGene:Hs.20395 UniGene:Hs.733236 PDB:2CKC PDB:2V0E PDB:2V0F
PDBsum:2CKC PDBsum:2V0E PDBsum:2V0F ProteinModelPortal:Q9P2D1
SMR:Q9P2D1 DIP:DIP-48685N IntAct:Q9P2D1 STRING:Q9P2D1
PhosphoSite:Q9P2D1 DMDM:148877246 PaxDb:Q9P2D1 PRIDE:Q9P2D1
Ensembl:ENST00000307121 Ensembl:ENST00000423902
Ensembl:ENST00000525508 GeneID:55636 KEGG:hsa:55636 UCSC:uc003xue.3
GeneCards:GC08P061642 H-InvDB:HIX0007533 HGNC:HGNC:20626 MIM:214800
MIM:608765 MIM:608892 MIM:612370 neXtProt:NX_Q9P2D1 Orphanet:138
Orphanet:478 Orphanet:432 PharmGKB:PA134948695 InParanoid:Q9P2D1
OMA:TFGVIFD EvolutionaryTrace:Q9P2D1 GenomeRNAi:55636 NextBio:60291
ArrayExpress:Q9P2D1 Bgee:Q9P2D1 CleanEx:HS_CHD7
Genevestigator:Q9P2D1 GermOnline:ENSG00000171316 GO:GO:0021545
GO:GO:0043584 GO:GO:0060123 Uniprot:Q9P2D1
Length = 2997
Score = 399 (145.5 bits), Expect = 2.8e-35, P = 2.8e-35
Identities = 106/328 (32%), Positives = 173/328 (52%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQL GVN+LL + + ILADEMGLGKTIQ+IT+L + +L GP L++ P
Sbjct: 968 LREYQLEGVNWLLFNWYN-MRNCILADEMGLGKTIQSITFLYEI-YLKGIHGPFLVIAPL 1025
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
S + NWERE + W +V+ YHG+ A R + P V+ Y +
Sbjct: 1026 STIPNWEREFRTWT-ELNVVVYHGS--QASRRTIQLYEMYFKDPQGRVIKGSYKFHAIIT 1082
Query: 288 VQQK--DDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
+ D L+ W CV++DEAH LK++N + L + + +++LTGTPLQN
Sbjct: 1083 TFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMM--DLEHKVLLTGTPLQNT 1140
Query: 346 LHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFILRRLKSDVMQQLVP 405
+ EL+SLL F+ P F +E +++ + + + + ++++IL P +LRRLK DV + L P
Sbjct: 1141 VEELFSLLHFLEPSRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAP 1200
Query: 406 KIQWVEYVTMERPQEDAYRVAIEE-YRAVSRARIAKLSDADLATIVGVLPQRQISNYFVQ 464
K + + V + Q+ YR +E+ + +S+ A + +L N ++
Sbjct: 1201 KEETIIEVELTNIQKKYYRAILEKNFTFLSKG-------GGQANVPNLL------NTMME 1247
Query: 465 FRKIANHPLLVRRIYSDDDVVRFAKKLH 492
RK NHP L+ +++ ++ K+ H
Sbjct: 1248 LRKCCNHPYLING--AEEKILEEFKETH 1273
>RGD|1582725 [details] [associations]
symbol:Chd5 "chromodomain helicase DNA binding protein 5"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1582725 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 OrthoDB:EOG4WH8JX
IPI:IPI00948282 Ensembl:ENSRNOT00000067364 UCSC:RGD:1582725
ArrayExpress:D4A5U0 Uniprot:D4A5U0
Length = 1940
Score = 391 (142.7 bits), Expect = 2.8e-35, Sum P(2) = 2.8e-35
Identities = 109/341 (31%), Positives = 179/341 (52%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L PYQL G+N+L + +G ILADEMGLGKT+Q I +L L + GP+L+ P
Sbjct: 698 LHPYQLEGLNWLRFSWAQG-TDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPL 756
Query: 228 SVLENWERELKKWCPSFSVLQYHG--AGRTA-----YSRELSSLA--------KAGLPPP 272
S + NWERE + W P F V+ Y G R+ +S E +++ K +
Sbjct: 757 STIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRGGKKVFRMKKEVQIK 816
Query: 273 FNVLLVCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNAN 332
F+VLL Y L ++ D+ IL W+C+++DEAH LK+ S ++ L S +
Sbjct: 817 FHVLLTSYELI---TI----DQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSY--KID 867
Query: 333 QRLMLTGTPLQNDLHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFIL 392
+L+LTGTPLQN+L EL+ LL F+ P+ F + L++ + D I ++ +LGP +L
Sbjct: 868 YKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHML 927
Query: 393 RRLKSDVMQQLVPKIQWVEYVTMERPQEDAYR-VAIEEYRAVSRARIAKLSDADLATIVG 451
RRLK+DV + + K + + V + + Q+ Y+ + + A++ +K ++ +
Sbjct: 928 RRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALN----SKGGGNQVSLLNI 983
Query: 452 VLPQRQISNYFVQFRKIA-NHPLLVRRIYSDDDVVRFAKKL 491
++ ++ N+ F A P+L Y +V+ + KL
Sbjct: 984 MMDLKKCCNHPYLFPVAAVEAPMLPNGSYDGSSLVKSSGKL 1024
Score = 37 (18.1 bits), Expect = 2.8e-35, Sum P(2) = 2.8e-35
Identities = 6/20 (30%), Positives = 11/20 (55%)
Query: 150 QSDIDDACGDEDSDFQPVLK 169
+ D+++ E SD+ P K
Sbjct: 78 EEDLEEKSESEGSDYSPTKK 97
>UNIPROTKB|E2R5Z7 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:AAEX03002279 EMBL:AAEX03002280 Ensembl:ENSCAFT00000017614
NextBio:20854276 Uniprot:E2R5Z7
Length = 1831
Score = 396 (144.5 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 100/272 (36%), Positives = 153/272 (56%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQL G+N+L + K + ILADEMGLGKTIQ I++L L H + GP LIV P
Sbjct: 487 LRDYQLEGLNWLAHSWCKSNS-VILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPL 545
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYS-RELSSLAKAGLPPPFNVLLVCYSLFERH 286
S L +W+RE + W P +V+ Y G + + RE + FN L+ Y + +
Sbjct: 546 STLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLKFNALITTYEILLK- 604
Query: 287 SVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDL 346
D+ +L W+ + +DEAH LK+ +S +K L+ ++ RL++TGTPLQN L
Sbjct: 605 ------DKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDF--KSHHRLLITGTPLQNSL 656
Query: 347 HELWSLLEFMMPDLFAT-EDVDLKKLLNGEDRDL-IGRMKSILGPFILRRLKSDVMQQLV 404
ELWSLL F+MP+ F ED + +G+ R+ + +L PF+LRR+K DV + L
Sbjct: 657 KELWSLLHFIMPEKFEFWEDFEED---HGKGRENGYQSLHKVLEPFLLRRVKKDVEKSLP 713
Query: 405 PKIQWVEYVTMERPQEDAYR-VAIEEYRAVSR 435
K++ + V M Q+ Y+ + Y+A+++
Sbjct: 714 AKVEQILRVEMSALQKQYYKWILTRNYKALAK 745
>UNIPROTKB|J9PA90 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AHSWCKN EMBL:AAEX03002279 EMBL:AAEX03002280
Ensembl:ENSCAFT00000045903 Uniprot:J9PA90
Length = 1840
Score = 396 (144.5 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 100/272 (36%), Positives = 153/272 (56%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQL G+N+L + K + ILADEMGLGKTIQ I++L L H + GP LIV P
Sbjct: 497 LRDYQLEGLNWLAHSWCKSNS-VILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPL 555
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYS-RELSSLAKAGLPPPFNVLLVCYSLFERH 286
S L +W+RE + W P +V+ Y G + + RE + FN L+ Y + +
Sbjct: 556 STLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLKFNALITTYEILLK- 614
Query: 287 SVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDL 346
D+ +L W+ + +DEAH LK+ +S +K L+ ++ RL++TGTPLQN L
Sbjct: 615 ------DKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDF--KSHHRLLITGTPLQNSL 666
Query: 347 HELWSLLEFMMPDLFAT-EDVDLKKLLNGEDRDL-IGRMKSILGPFILRRLKSDVMQQLV 404
ELWSLL F+MP+ F ED + +G+ R+ + +L PF+LRR+K DV + L
Sbjct: 667 KELWSLLHFIMPEKFEFWEDFEED---HGKGRENGYQSLHKVLEPFLLRRVKKDVEKSLP 723
Query: 405 PKIQWVEYVTMERPQEDAYR-VAIEEYRAVSR 435
K++ + V M Q+ Y+ + Y+A+++
Sbjct: 724 AKVEQILRVEMSALQKQYYKWILTRNYKALAK 755
>WB|WBGene00016868 [details] [associations]
symbol:C52B9.8 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 EMBL:FO080644 PIR:T28937 RefSeq:NP_508736.1
ProteinModelPortal:Q22944 SMR:Q22944 STRING:Q22944 PaxDb:Q22944
EnsemblMetazoa:C52B9.8 GeneID:180705 KEGG:cel:CELE_C52B9.8
UCSC:C52B9.8 CTD:180705 WormBase:C52B9.8 InParanoid:Q22944
NextBio:910548 Uniprot:Q22944
Length = 1336
Score = 394 (143.8 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 104/325 (32%), Positives = 169/325 (52%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
LKPYQ+ G+ +++ L+ + G ILADEMGLGKTIQ I ++ L + GP L++ P
Sbjct: 366 LKPYQIKGLEWMVSLFNNNLNG-ILADEMGLGKTIQTIAFITYLMEIKKTSGPFLVIVPL 424
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
S + NW+ E KW + ++ Y G T + + K+G FNVLL + FE +
Sbjct: 425 STVPNWQNEFDKWAANVHLIAYKGPKETR--KVFEPIIKSG---KFNVLL---TTFE-YV 475
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
+++K +L + RW +++DE H LK+++ + +++ +RL++TGTPLQN L
Sbjct: 476 IREK---ALLGKLRWKYMIIDEGHRLKNQHC-KLTEMLNTRFQCQRRLLITGTPLQNKLP 531
Query: 348 ELWSLLEFMMPDLFATEDVDLKKLLN------GEDRDL--------IGRMKSILGPFILR 393
ELW+LL F++P +F++ ++ N GE +L I R+ +L PF+LR
Sbjct: 532 ELWALLNFLLPSIFSSCST-FEQWFNAPFATTGEKVELTQEETMLIIRRLHKVLRPFLLR 590
Query: 394 RLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVL 453
RLK +V +L K+++V M Q+ Y+ + L D T G
Sbjct: 591 RLKKEVESELPDKMEFVVRCDMSALQKVLYK----------HMQKGLLLDGKTNT--G-- 636
Query: 454 PQRQISNYFVQFRKIANHPLLVRRI 478
+ + N + RK+ NHP L +
Sbjct: 637 -SKSLRNTMIHLRKLCNHPFLFENV 660
>UNIPROTKB|O14646 [details] [associations]
symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0035064 "methylated histone residue
binding" evidence=IDA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=TAS] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0003677 GO:GO:0006357 GO:GO:0006351 GO:GO:0006338
GO:GO:0004003 GO:GO:0035064 InterPro:IPR016197 SUPFAM:SSF54160
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
HOVERGEN:HBG005325 InterPro:IPR025260 Pfam:PF13907 CTD:1105
KO:K11367 EMBL:AF006513 EMBL:AC022121 EMBL:BC117134 IPI:IPI00297851
IPI:IPI00954192 RefSeq:NP_001261.2 UniGene:Hs.643465 PDB:2B2T
PDB:2B2U PDB:2B2V PDB:2B2W PDB:2B2Y PDB:4B4C PDBsum:2B2T
PDBsum:2B2U PDBsum:2B2V PDBsum:2B2W PDBsum:2B2Y PDBsum:4B4C
ProteinModelPortal:O14646 SMR:O14646 IntAct:O14646 STRING:O14646
PhosphoSite:O14646 PaxDb:O14646 PRIDE:O14646
Ensembl:ENST00000284049 GeneID:1105 KEGG:hsa:1105 UCSC:uc003knf.3
GeneCards:GC05M098219 H-InvDB:HIX0005061 HGNC:HGNC:1915
HPA:HPA022236 MIM:602118 neXtProt:NX_O14646 PharmGKB:PA26451
HOGENOM:HOG000207917 InParanoid:O14646 OMA:AETHENE
OrthoDB:EOG4PG601 PhylomeDB:O14646 DrugBank:DB00445
EvolutionaryTrace:O14646 GenomeRNAi:1105 NextBio:4580
ArrayExpress:O14646 Bgee:O14646 CleanEx:HS_CHD1
Genevestigator:O14646 GermOnline:ENSG00000153922 Uniprot:O14646
Length = 1710
Score = 395 (144.1 bits), Expect = 3.6e-35, P = 3.6e-35
Identities = 100/274 (36%), Positives = 155/274 (56%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQL G+N+L + KG + ILADEMGLGKTIQ I++L L H + GP L+V P
Sbjct: 481 LRDYQLNGLNWLAHSWCKGNS-CILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPL 539
Query: 228 SVLENWERELKKWCPSFSVLQYHG---AGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFE 284
S L +W+RE++ W + + Y G + + E + L FN+LL Y +
Sbjct: 540 STLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWTHHQTKRLK--FNILLTTYEILL 597
Query: 285 RHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQN 344
+ D+ L W+ + +DEAH LK+ +S +K L+ +N RL++TGTPLQN
Sbjct: 598 K-------DKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDF--KSNHRLLITGTPLQN 648
Query: 345 DLHELWSLLEFMMPDLFAT-EDVDLKKLLNGEDRDL-IGRMKSILGPFILRRLKSDVMQQ 402
L ELWSLL F+MP+ F++ ED + + +G+ R+ + L PF+LRR+K DV +
Sbjct: 649 SLKELWSLLHFIMPEKFSSWEDFEEE---HGKGREYGYASLHKELEPFLLRRVKKDVEKS 705
Query: 403 LVPKIQWVEYVTMERPQEDAYR-VAIEEYRAVSR 435
L K++ + + M Q+ Y+ + Y+A+S+
Sbjct: 706 LPAKVEQILRMEMSALQKQYYKWILTRNYKALSK 739
>UNIPROTKB|E2QUI5 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 CTD:1105
GeneTree:ENSGT00560000076896 KO:K11367 EMBL:AAEX03002026
RefSeq:XP_848459.1 Ensembl:ENSCAFT00000012332 GeneID:488891
KEGG:cfa:488891 NextBio:20862162 Uniprot:E2QUI5
Length = 1711
Score = 395 (144.1 bits), Expect = 3.6e-35, P = 3.6e-35
Identities = 101/275 (36%), Positives = 155/275 (56%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQL G+N+L + KG + ILADEMGLGKTIQ I++L L H + GP L+V P
Sbjct: 480 LRDYQLNGLNWLAHSWCKGNS-CILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPL 538
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPP----FNVLLVCYSLF 283
S L +W+RE++ W + + Y G SR + + P FN+LL Y +
Sbjct: 539 STLTSWQREIQTWASQMNAVVYLG---DINSRNMIRTHEWMHPQTKRLKFNILLTTYEIL 595
Query: 284 ERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQ 343
+ D+ L W+ + +DEAH LK+ +S +K L+ +N RL++TGTPLQ
Sbjct: 596 LK-------DKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDF--KSNHRLLITGTPLQ 646
Query: 344 NDLHELWSLLEFMMPDLFAT-EDVDLKKLLNGEDRDL-IGRMKSILGPFILRRLKSDVMQ 401
N L ELWSLL F+MP+ F++ ED + + +G+ R+ + L PF+LRR+K DV +
Sbjct: 647 NSLKELWSLLHFIMPEKFSSWEDFEEE---HGKGREYGYASLHKELEPFLLRRVKKDVEK 703
Query: 402 QLVPKIQWVEYVTMERPQEDAYR-VAIEEYRAVSR 435
L K++ + + M Q+ Y+ + Y+A+S+
Sbjct: 704 SLPAKVEQILRMEMSALQKQYYKWILTRNYKALSK 738
>MGI|MGI:88393 [details] [associations]
symbol:Chd1 "chromodomain helicase DNA binding protein 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=NAS] [GO:0004386 "helicase activity"
evidence=NAS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=NAS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006333 "chromatin assembly or disassembly" evidence=NAS]
[GO:0006338 "chromatin remodeling" evidence=IGI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0035064 "methylated histone
residue binding" evidence=ISO] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 MGI:MGI:88393 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0003682 GO:GO:0006338 GO:GO:0006333
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 HOVERGEN:HBG005325
InterPro:IPR025260 Pfam:PF13907 CTD:1105
GeneTree:ENSGT00560000076896 KO:K11367 HOGENOM:HOG000207917
OMA:AETHENE OrthoDB:EOG4PG601 EMBL:L10410 EMBL:CH466630
EMBL:BC115822 IPI:IPI00107999 PIR:A47392 RefSeq:NP_031716.2
UniGene:Mm.8137 ProteinModelPortal:P40201 SMR:P40201 IntAct:P40201
STRING:P40201 PhosphoSite:P40201 PaxDb:P40201 PRIDE:P40201
Ensembl:ENSMUST00000024627 GeneID:12648 KEGG:mmu:12648
InParanoid:Q14BJ0 NextBio:281852 Bgee:P40201 CleanEx:MM_CHD1
Genevestigator:P40201 GermOnline:ENSMUSG00000023852 Uniprot:P40201
Length = 1711
Score = 395 (144.1 bits), Expect = 3.6e-35, P = 3.6e-35
Identities = 101/275 (36%), Positives = 155/275 (56%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQL G+N+L + KG + ILADEMGLGKTIQ I++L L H + GP L+V P
Sbjct: 479 LRDYQLNGLNWLAHSWCKGNS-CILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPL 537
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPP----FNVLLVCYSLF 283
S L +W+RE++ W + + Y G SR + + P FN+LL Y +
Sbjct: 538 STLTSWQREIQTWASQMNAVVYLG---DINSRNMIRTHEWMHPQTKRLKFNILLTTYEIL 594
Query: 284 ERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQ 343
+ D+ L W+ + +DEAH LK+ +S +K L+ +N RL++TGTPLQ
Sbjct: 595 LK-------DKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDF--KSNHRLLITGTPLQ 645
Query: 344 NDLHELWSLLEFMMPDLFAT-EDVDLKKLLNGEDRDL-IGRMKSILGPFILRRLKSDVMQ 401
N L ELWSLL F+MP+ F++ ED + + +G+ R+ + L PF+LRR+K DV +
Sbjct: 646 NSLKELWSLLHFIMPEKFSSWEDFEEE---HGKGREYGYASLHKELEPFLLRRVKKDVEK 702
Query: 402 QLVPKIQWVEYVTMERPQEDAYR-VAIEEYRAVSR 435
L K++ + + M Q+ Y+ + Y+A+S+
Sbjct: 703 SLPAKVEQILRMEMSALQKQYYKWILTRNYKALSK 737
>RGD|1311921 [details] [associations]
symbol:Chd7 "chromodomain helicase DNA binding protein 7"
species:10116 "Rattus norvegicus" [GO:0001501 "skeletal system
development" evidence=IEA;ISO] [GO:0001568 "blood vessel
development" evidence=ISO] [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0003007 "heart morphogenesis"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0007417 "central
nervous system development" evidence=IEA;ISO] [GO:0007512 "adult
heart development" evidence=IEA;ISO] [GO:0007605 "sensory
perception of sound" evidence=IEA;ISO] [GO:0007626 "locomotory
behavior" evidence=ISO] [GO:0007628 "adult walking behavior"
evidence=IEA;ISO] [GO:0008015 "blood circulation" evidence=IEA;ISO]
[GO:0021545 "cranial nerve development" evidence=IEA;ISO]
[GO:0030217 "T cell differentiation" evidence=IEA;ISO] [GO:0030540
"female genitalia development" evidence=IEA;ISO] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=IEA;ISO] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IEA;ISO] [GO:0042471 "ear morphogenesis" evidence=ISO]
[GO:0042472 "inner ear morphogenesis" evidence=ISO] [GO:0043010
"camera-type eye development" evidence=ISO] [GO:0043584 "nose
development" evidence=IEA;ISO] [GO:0048752 "semicircular canal
morphogenesis" evidence=IEA;ISO] [GO:0048806 "genitalia
development" evidence=ISO] [GO:0048844 "artery morphogenesis"
evidence=IEA;ISO] [GO:0050890 "cognition" evidence=IEA;ISO]
[GO:0060021 "palate development" evidence=IEA;ISO] [GO:0060041
"retina development in camera-type eye" evidence=IEA;ISO]
[GO:0060123 "regulation of growth hormone secretion"
evidence=IEA;ISO] [GO:0060173 "limb development" evidence=ISO]
[GO:0060324 "face development" evidence=IEA;ISO] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 SMART:SM00717 Pfam:PF00385 RGD:1311921 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0008015 GO:GO:0003007
GO:GO:0050890 GO:GO:0001701 GO:GO:0040018 GO:GO:0007417
GO:GO:0003682 GO:GO:0001501 GO:GO:0060041 GO:GO:0007605
GO:GO:0007512 GO:GO:0004386 GO:GO:0035116 GO:GO:0060324
GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030540
GO:GO:0007628 GO:GO:0030217 GO:GO:0048752 InterPro:IPR023780
CTD:55636 KO:K14437 OrthoDB:EOG4MCWZD GO:GO:0021545 GO:GO:0043584
GO:GO:0060123 GeneTree:ENSGT00560000077077 IPI:IPI00366595
RefSeq:XP_003749947.1 PRIDE:D3ZAP7 Ensembl:ENSRNOT00000008901
GeneID:312974 KEGG:rno:312974 UCSC:RGD:1311921 Uniprot:D3ZAP7
Length = 2985
Score = 398 (145.2 bits), Expect = 3.6e-35, P = 3.6e-35
Identities = 109/344 (31%), Positives = 180/344 (52%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQL GVN+LL + + ILADEMGLGKTIQ+IT+L + +L GP L++ P
Sbjct: 957 LREYQLEGVNWLLFNWYN-MRNCILADEMGLGKTIQSITFLYEI-YLKGIHGPFLVIAPL 1014
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
S + NWERE + W +V+ YHG+ A R + P V+ Y +
Sbjct: 1015 STIPNWEREFRTWT-ELNVVVYHGS--QASRRTIQLYEMYFKDPQGRVIKGSYKFHAIIT 1071
Query: 288 VQQK--DDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
+ D L+ W CV++DEAH LK++N + L + + +++LTGTPLQN
Sbjct: 1072 TFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMM--DLEHKVLLTGTPLQNT 1129
Query: 346 LHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFILRRLKSDVMQQLVP 405
+ EL+SLL F+ P F +E +++ + + + + ++++IL P +LRRLK DV + L P
Sbjct: 1130 VEELFSLLHFLEPSRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAP 1189
Query: 406 KIQWVEYVTMERPQEDAYRVAIEE-YRAVSRARIAKLSDADLATIVGVLPQRQISNYFVQ 464
K + + V + Q+ YR +E+ + +S+ A + +L N ++
Sbjct: 1190 KEETIIEVELTNIQKKYYRAILEKNFTFLSKG-------GGQANVPNLL------NTMME 1236
Query: 465 FRKIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFECTLERVIE 508
RK NHP L+ +++ ++ K H + F+ L+ +I+
Sbjct: 1237 LRKCCNHPYLING--AEEKILEEFKDAHNADSPDFQ--LQAMIQ 1276
>UNIPROTKB|J9P6Y8 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AETHENE EMBL:AAEX03002026 Ensembl:ENSCAFT00000043995
Uniprot:J9P6Y8
Length = 1782
Score = 395 (144.1 bits), Expect = 3.8e-35, P = 3.8e-35
Identities = 101/275 (36%), Positives = 155/275 (56%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQL G+N+L + KG + ILADEMGLGKTIQ I++L L H + GP L+V P
Sbjct: 463 LRDYQLNGLNWLAHSWCKGNS-CILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPL 521
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPP----FNVLLVCYSLF 283
S L +W+RE++ W + + Y G SR + + P FN+LL Y +
Sbjct: 522 STLTSWQREIQTWASQMNAVVYLG---DINSRNMIRTHEWMHPQTKRLKFNILLTTYEIL 578
Query: 284 ERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQ 343
+ D+ L W+ + +DEAH LK+ +S +K L+ +N RL++TGTPLQ
Sbjct: 579 LK-------DKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDF--KSNHRLLITGTPLQ 629
Query: 344 NDLHELWSLLEFMMPDLFAT-EDVDLKKLLNGEDRDL-IGRMKSILGPFILRRLKSDVMQ 401
N L ELWSLL F+MP+ F++ ED + + +G+ R+ + L PF+LRR+K DV +
Sbjct: 630 NSLKELWSLLHFIMPEKFSSWEDFEEE---HGKGREYGYASLHKELEPFLLRRVKKDVEK 686
Query: 402 QLVPKIQWVEYVTMERPQEDAYR-VAIEEYRAVSR 435
L K++ + + M Q+ Y+ + Y+A+S+
Sbjct: 687 SLPAKVEQILRMEMSALQKQYYKWILTRNYKALSK 721
>UNIPROTKB|F1RN66 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:CU570924 EMBL:CU928692 Ensembl:ENSSSCT00000015489
Uniprot:F1RN66
Length = 1794
Score = 395 (144.1 bits), Expect = 3.9e-35, P = 3.9e-35
Identities = 101/275 (36%), Positives = 155/275 (56%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQL G+N+L + KG + ILADEMGLGKTIQ I++L L H + GP L+V P
Sbjct: 475 LRDYQLNGLNWLAHSWCKGNS-CILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPL 533
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPP----FNVLLVCYSLF 283
S L +W+RE++ W + + Y G SR + + P FN+LL Y +
Sbjct: 534 STLTSWQREIQTWASQMNAVVYLG---DINSRNMIRTHEWMHPQTKRLKFNILLTTYEIL 590
Query: 284 ERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQ 343
+ D+ L W+ + +DEAH LK+ +S +K L+ +N RL++TGTPLQ
Sbjct: 591 LK-------DKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDF--KSNHRLLITGTPLQ 641
Query: 344 NDLHELWSLLEFMMPDLFAT-EDVDLKKLLNGEDRDL-IGRMKSILGPFILRRLKSDVMQ 401
N L ELWSLL F+MP+ F++ ED + + +G+ R+ + L PF+LRR+K DV +
Sbjct: 642 NSLKELWSLLHFIMPEKFSSWEDFEEE---HGKGREYGYASLHKELEPFLLRRVKKDVEK 698
Query: 402 QLVPKIQWVEYVTMERPQEDAYR-VAIEEYRAVSR 435
L K++ + + M Q+ Y+ + Y+A+S+
Sbjct: 699 SLPAKVEQILRMEMSALQKQYYKWILTRNYKALSK 733
>UNIPROTKB|I3L6N4 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:CU570924 EMBL:CU928692 Ensembl:ENSSSCT00000022643
Uniprot:I3L6N4
Length = 1798
Score = 395 (144.1 bits), Expect = 3.9e-35, P = 3.9e-35
Identities = 101/275 (36%), Positives = 155/275 (56%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQL G+N+L + KG + ILADEMGLGKTIQ I++L L H + GP L+V P
Sbjct: 475 LRDYQLNGLNWLAHSWCKGNS-CILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPL 533
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPP----FNVLLVCYSLF 283
S L +W+RE++ W + + Y G SR + + P FN+LL Y +
Sbjct: 534 STLTSWQREIQTWASQMNAVVYLG---DINSRNMIRTHEWMHPQTKRLKFNILLTTYEIL 590
Query: 284 ERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQ 343
+ D+ L W+ + +DEAH LK+ +S +K L+ +N RL++TGTPLQ
Sbjct: 591 LK-------DKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDF--KSNHRLLITGTPLQ 641
Query: 344 NDLHELWSLLEFMMPDLFAT-EDVDLKKLLNGEDRDL-IGRMKSILGPFILRRLKSDVMQ 401
N L ELWSLL F+MP+ F++ ED + + +G+ R+ + L PF+LRR+K DV +
Sbjct: 642 NSLKELWSLLHFIMPEKFSSWEDFEEE---HGKGREYGYASLHKELEPFLLRRVKKDVEK 698
Query: 402 QLVPKIQWVEYVTMERPQEDAYR-VAIEEYRAVSR 435
L K++ + + M Q+ Y+ + Y+A+S+
Sbjct: 699 SLPAKVEQILRMEMSALQKQYYKWILTRNYKALSK 733
>UNIPROTKB|I3LIS2 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035064 "methylated histone residue binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006338 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 OMA:AETHENE EMBL:CU570924
EMBL:CU928692 Ensembl:ENSSSCT00000032432 Uniprot:I3LIS2
Length = 1799
Score = 395 (144.1 bits), Expect = 3.9e-35, P = 3.9e-35
Identities = 101/275 (36%), Positives = 155/275 (56%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQL G+N+L + KG + ILADEMGLGKTIQ I++L L H + GP L+V P
Sbjct: 476 LRDYQLNGLNWLAHSWCKGNS-CILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPL 534
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPP----FNVLLVCYSLF 283
S L +W+RE++ W + + Y G SR + + P FN+LL Y +
Sbjct: 535 STLTSWQREIQTWASQMNAVVYLG---DINSRNMIRTHEWMHPQTKRLKFNILLTTYEIL 591
Query: 284 ERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQ 343
+ D+ L W+ + +DEAH LK+ +S +K L+ +N RL++TGTPLQ
Sbjct: 592 LK-------DKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDF--KSNHRLLITGTPLQ 642
Query: 344 NDLHELWSLLEFMMPDLFAT-EDVDLKKLLNGEDRDL-IGRMKSILGPFILRRLKSDVMQ 401
N L ELWSLL F+MP+ F++ ED + + +G+ R+ + L PF+LRR+K DV +
Sbjct: 643 NSLKELWSLLHFIMPEKFSSWEDFEEE---HGKGREYGYASLHKELEPFLLRRVKKDVEK 699
Query: 402 QLVPKIQWVEYVTMERPQEDAYR-VAIEEYRAVSR 435
L K++ + + M Q+ Y+ + Y+A+S+
Sbjct: 700 SLPAKVEQILRMEMSALQKQYYKWILTRNYKALSK 734
>UNIPROTKB|F1MGF2 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0035064 "methylated histone residue binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006338 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 OMA:AETHENE EMBL:DAAA02021391
EMBL:DAAA02021392 IPI:IPI00717393 UniGene:Bt.105262
Ensembl:ENSBTAT00000034967 NextBio:20866990 Uniprot:F1MGF2
Length = 1810
Score = 395 (144.1 bits), Expect = 3.9e-35, P = 3.9e-35
Identities = 101/275 (36%), Positives = 155/275 (56%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQL G+N+L + KG + ILADEMGLGKTIQ I++L L H + GP L+V P
Sbjct: 493 LRDYQLNGLNWLAHSWCKGNS-CILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPL 551
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPP----FNVLLVCYSLF 283
S L +W+RE++ W + + Y G SR + + P FN+LL Y +
Sbjct: 552 STLTSWQREIQTWASQMNAVVYLG---DINSRNMIRTHEWMHPQTKRLKFNILLTTYEIL 608
Query: 284 ERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQ 343
+ D+ L W+ + +DEAH LK+ +S +K L+ +N RL++TGTPLQ
Sbjct: 609 LK-------DKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDF--KSNHRLLITGTPLQ 659
Query: 344 NDLHELWSLLEFMMPDLFAT-EDVDLKKLLNGEDRDL-IGRMKSILGPFILRRLKSDVMQ 401
N L ELWSLL F+MP+ F++ ED + + +G+ R+ + L PF+LRR+K DV +
Sbjct: 660 NSLKELWSLLHFIMPEKFSSWEDFEEE---HGKGREYGYASLHKELEPFLLRRVKKDVEK 716
Query: 402 QLVPKIQWVEYVTMERPQEDAYR-VAIEEYRAVSR 435
L K++ + + M Q+ Y+ + Y+A+S+
Sbjct: 717 SLPAKVEQILRMEMSALQKQYYKWILTRNYKALSK 751
>UNIPROTKB|K7EMY3 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AL031847 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:AL035406
HGNC:HGNC:16816 Ensembl:ENST00000462991 Uniprot:K7EMY3
Length = 1060
Score = 390 (142.3 bits), Expect = 5.5e-35, P = 5.5e-35
Identities = 109/341 (31%), Positives = 179/341 (52%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L PYQL G+N+L + +G ILADEMGLGKT+Q I +L L + GP+L+ P
Sbjct: 83 LHPYQLEGLNWLRFSWAQG-TDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPL 141
Query: 228 SVLENWERELKKWCPSFSVLQYHG--AGRTA-----YSRELSSLA--------KAGLPPP 272
S + NWERE + W P F V+ Y G R+ +S E +++ K +
Sbjct: 142 STIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIK 201
Query: 273 FNVLLVCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNAN 332
F+VLL Y L ++ D+ IL W+C+++DEAH LK+ S ++ L S +
Sbjct: 202 FHVLLTSYELI---TI----DQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSY--KID 252
Query: 333 QRLMLTGTPLQNDLHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFIL 392
+L+LTGTPLQN+L EL+ LL F+ P+ F + L++ + D I ++ +LGP +L
Sbjct: 253 YKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHML 312
Query: 393 RRLKSDVMQQLVPKIQWVEYVTMERPQEDAYR-VAIEEYRAVSRARIAKLSDADLATIVG 451
RRLK+DV + + K + + V + + Q+ Y+ + + A++ +K ++ +
Sbjct: 313 RRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALN----SKGGGNQVSLLNI 368
Query: 452 VLPQRQISNYFVQFRKIA-NHPLLVRRIYSDDDVVRFAKKL 491
++ ++ N+ F A P+L Y +V+ + KL
Sbjct: 369 MMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKL 409
>POMBASE|SPCC1620.14c [details] [associations]
symbol:snf22 "ATP-dependent DNA helicase Snf22"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0000991 "core RNA polymerase II binding transcription factor
activity" evidence=ISO] [GO:0003677 "DNA binding" evidence=IC]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISM]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005819 "spindle" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=IGI] [GO:0007131 "reciprocal
meiotic recombination" evidence=IMP] [GO:0010972 "negative
regulation of G2/M transition of mitotic cell cycle" evidence=IMP]
[GO:0016514 "SWI/SNF complex" evidence=IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEP] [GO:1900389 "regulation of glucose import
by regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:1900400 "regulation of iron ion import by
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR014978 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00384
SMART:SM00490 SMART:SM00951 PomBase:SPCC1620.14c GO:GO:0005524
GO:GO:0005819 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003677
GO:GO:0045944 GO:GO:0000122 GO:GO:0000790 GO:GO:0016514
GO:GO:0004003 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 GO:GO:0000991 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0007131
InterPro:IPR014012 PROSITE:PS51204 GO:GO:0010972
HOGENOM:HOG000172362 KO:K11786 OrthoDB:EOG4D565R EMBL:AB162437
PIR:T41628 RefSeq:NP_588472.2 ProteinModelPortal:O94421
DIP:DIP-48377N STRING:O94421 PRIDE:O94421
EnsemblFungi:SPCC1620.14c.1 GeneID:2538881 KEGG:spo:SPCC1620.14c
NextBio:20800061 GO:GO:1900389 GO:GO:1900400 Uniprot:O94421
Length = 1680
Score = 393 (143.4 bits), Expect = 5.7e-35, P = 5.7e-35
Identities = 120/358 (33%), Positives = 188/358 (52%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
LK YQL G+ ++L LY + G ILADEMGLGKTIQ I ++ L N GP LI+ P
Sbjct: 869 LKDYQLKGLEWMLSLYNNNLNG-ILADEMGLGKTIQTIAFITYLIEKKNQQGPFLIIVPL 927
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
S L NW E +KW PS + Y G + + L S ++ FNVLL + FE +
Sbjct: 928 STLTNWIMEFEKWAPSVKKIAYKGPPQLR--KTLQSQIRSS---NFNVLL---TTFE-YI 978
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
++ DR +L R +W +++DE H +K+ S + + +S ++ RL+LTGTPLQN+L
Sbjct: 979 IK---DRPLLSRIKWVHMIIDEGHRIKNTQS-KLTSTLSTYYHSQYRLILTGTPLQNNLP 1034
Query: 348 ELWSLLEFMMPDLF-ATEDVD------------LKKL-LNGEDRDLI-GRMKSILGPFIL 392
ELW+LL F++P +F + + D K+ LN E+ LI R+ +L PF+
Sbjct: 1035 ELWALLNFVLPKIFNSIKSFDEWFNTPFANTGGQDKIGLNEEEALLIIKRLHKVLRPFLF 1094
Query: 393 RRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGV 452
RRLK DV ++L K++ V ++ P + ++ Y+ + + + + D + G+
Sbjct: 1095 RRLKKDVEKELPDKVEKV----IKCPLSG---LQLKLYQQMKKHGMLFV-DGEKGK-TGI 1145
Query: 453 LPQRQISNYFVQFRKIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFECTLERVIEEL 510
+ + N +Q +KI NHP + + D L A FE L+R++ +L
Sbjct: 1146 ---KGLQNTVMQLKKICNHPFIFEDVERAIDPSGTNVDLLWRAAGKFEL-LDRILPKL 1199
>MGI|MGI:106209 [details] [associations]
symbol:Hells "helicase, lymphoid specific" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000775 "chromosome, centromeric region" evidence=IDA]
[GO:0001655 "urogenital system development" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005721 "centromeric heterochromatin"
evidence=IDA] [GO:0006306 "DNA methylation" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IMP] [GO:0006346
"methylation-dependent chromatin silencing" evidence=IMP]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IMP] [GO:0010216 "maintenance of DNA
methylation" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0030098 "lymphocyte differentiation"
evidence=TAS] [GO:0031508 "centromeric heterochromatin assembly"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 MGI:MGI:106209 GO:GO:0005524
GO:GO:0005634 GO:GO:0043066 GO:GO:0051301 GO:GO:0007067
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0001655
GO:GO:0004386 GO:GO:0005721 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031508
GO:GO:0010216 HOGENOM:HOG000172362 OMA:ETFYTAI GO:GO:0006346
GO:GO:0030098 GO:GO:0046651 CTD:3070 HOVERGEN:HBG060049
OrthoDB:EOG4SN1N4 EMBL:U25691 EMBL:AF155210 EMBL:AK013266
EMBL:AK147126 EMBL:BC020056 EMBL:BC100394 IPI:IPI00121431
IPI:IPI00808497 PIR:JC4666 RefSeq:NP_032260.2 UniGene:Mm.392920
UniGene:Mm.486446 UniGene:Mm.57223 ProteinModelPortal:Q60848
SMR:Q60848 DIP:DIP-43735N IntAct:Q60848 MINT:MINT-2521001
STRING:Q60848 PhosphoSite:Q60848 PaxDb:Q60848 PRIDE:Q60848
DNASU:15201 Ensembl:ENSMUST00000025965 GeneID:15201 KEGG:mmu:15201
UCSC:uc008hjt.1 GeneTree:ENSGT00550000075106 InParanoid:Q60848
NextBio:287739 Bgee:Q60848 CleanEx:MM_HELLS Genevestigator:Q60848
GermOnline:ENSMUSG00000025001 Uniprot:Q60848
Length = 821
Score = 365 (133.5 bits), Expect = 5.9e-35, Sum P(2) = 5.9e-35
Identities = 98/274 (35%), Positives = 147/274 (53%)
Query: 167 VLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCP 226
V++ YQ+ G+ +L +L+ GI G ILADEMGLGKT+Q I + L+ PGP L+ P
Sbjct: 205 VMRWYQVEGMEWLRMLWENGING-ILADEMGLGKTVQCIATIALMIQ-RGVPGPFLVCGP 262
Query: 227 ASVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERH 286
S L NW E K++ P L YHG R + + ++ K + V + FE
Sbjct: 263 LSTLPNWMAEFKRFTPEIPTLLYHGT-REDRRKLVKNIHKR--QGTLQIHPVVVTSFE-- 317
Query: 287 SVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDL 346
+ +D + L+ W +++DE H +K+ + L NA+ +L+LTGTPLQN+L
Sbjct: 318 -IAMRD-QNALQHCYWKYLIVDEGHRIKNMKCRLIRELKRF--NADNKLLLTGTPLQNNL 373
Query: 347 HELWSLLEFMMPDLF----ATED-VDLKKLLN-GED-------RDLIGRMKSILGPFILR 393
ELWSLL F++PD+F + E D+ L ED ++++ + IL PF+LR
Sbjct: 374 SELWSLLNFLLPDVFDDLKSFESWFDITSLSETAEDIIAKEREQNVLHMLHQILTPFLLR 433
Query: 394 RLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAI 427
RLKSDV ++ PK + V Y + QE Y +
Sbjct: 434 RLKSDVALEVPPKREVVVYAPLCNKQEIFYTAIV 467
Score = 48 (22.0 bits), Expect = 5.9e-35, Sum P(2) = 5.9e-35
Identities = 16/56 (28%), Positives = 26/56 (46%)
Query: 457 QISNYFVQFRKIANHPLLVRRIYSDDDVVR-FAKKLHPMGAFGFECTLERVIEELK 511
++ N + RK NHP ++ Y D V + F + G L+R++ ELK
Sbjct: 542 KLRNIMMLLRKCCNHPYMIE--YPIDPVTQEFKIDEELVTNSGKFLILDRMLPELK 595
>UNIPROTKB|J9NRN3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 EMBL:AAEX03003895
EMBL:AAEX03003896 EMBL:AAEX03003897 Ensembl:ENSCAFT00000044104
Uniprot:J9NRN3
Length = 1195
Score = 390 (142.3 bits), Expect = 6.9e-35, P = 6.9e-35
Identities = 109/341 (31%), Positives = 179/341 (52%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L PYQL G+N+L + +G ILADEMGLGKT+Q I +L L + GP+L+ P
Sbjct: 674 LHPYQLEGLNWLRFSWAQG-TDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPL 732
Query: 228 SVLENWERELKKWCPSFSVLQYHG--AGRTA-----YSRELSSLA--------KAGLPPP 272
S + NWERE + W P F V+ Y G R+ +S E +++ K +
Sbjct: 733 STIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIK 792
Query: 273 FNVLLVCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNAN 332
F+VLL Y L ++ D+ IL W+C+++DEAH LK+ S ++ L S +
Sbjct: 793 FHVLLTSYELI---TI----DQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSY--KID 843
Query: 333 QRLMLTGTPLQNDLHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFIL 392
+L+LTGTPLQN+L EL+ LL F+ P+ F + L++ + D I ++ +LGP +L
Sbjct: 844 YKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHML 903
Query: 393 RRLKSDVMQQLVPKIQWVEYVTMERPQEDAYR-VAIEEYRAVSRARIAKLSDADLATIVG 451
RRLK+DV + + K + + V + + Q+ Y+ + + A++ +K ++ +
Sbjct: 904 RRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALN----SKGGGNQVSLLNI 959
Query: 452 VLPQRQISNYFVQFRKIA-NHPLLVRRIYSDDDVVRFAKKL 491
++ ++ N+ F A P+L Y +V+ + KL
Sbjct: 960 MMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKL 1000
>UNIPROTKB|F2Z2R5 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AL031847
GO:GO:0008026 InterPro:IPR023780 EMBL:AL035406 HGNC:HGNC:16816
ChiTaRS:CHD5 IPI:IPI00444866 ProteinModelPortal:F2Z2R5 SMR:F2Z2R5
Ensembl:ENST00000496404 ArrayExpress:F2Z2R5 Bgee:F2Z2R5
Uniprot:F2Z2R5
Length = 1225
Score = 390 (142.3 bits), Expect = 7.2e-35, P = 7.2e-35
Identities = 109/341 (31%), Positives = 179/341 (52%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L PYQL G+N+L + +G ILADEMGLGKT+Q I +L L + GP+L+ P
Sbjct: 700 LHPYQLEGLNWLRFSWAQG-TDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPL 758
Query: 228 SVLENWERELKKWCPSFSVLQYHG--AGRTA-----YSRELSSLA--------KAGLPPP 272
S + NWERE + W P F V+ Y G R+ +S E +++ K +
Sbjct: 759 STIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIK 818
Query: 273 FNVLLVCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNAN 332
F+VLL Y L ++ D+ IL W+C+++DEAH LK+ S ++ L S +
Sbjct: 819 FHVLLTSYELI---TI----DQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSY--KID 869
Query: 333 QRLMLTGTPLQNDLHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFIL 392
+L+LTGTPLQN+L EL+ LL F+ P+ F + L++ + D I ++ +LGP +L
Sbjct: 870 YKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHML 929
Query: 393 RRLKSDVMQQLVPKIQWVEYVTMERPQEDAYR-VAIEEYRAVSRARIAKLSDADLATIVG 451
RRLK+DV + + K + + V + + Q+ Y+ + + A++ +K ++ +
Sbjct: 930 RRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALN----SKGGGNQVSLLNI 985
Query: 452 VLPQRQISNYFVQFRKIA-NHPLLVRRIYSDDDVVRFAKKL 491
++ ++ N+ F A P+L Y +V+ + KL
Sbjct: 986 MMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKL 1026
>TAIR|locus:2040184 [details] [associations]
symbol:PKL "PICKLE" species:3702 "Arabidopsis thaliana"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003678 "DNA helicase activity" evidence=ISS] [GO:0016568
"chromatin modification" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009736 "cytokinin
mediated signaling pathway" evidence=IMP] [GO:0009733 "response to
auxin stimulus" evidence=IMP] [GO:2000023 "regulation of lateral
root development" evidence=IMP] [GO:0009788 "negative regulation of
abscisic acid mediated signaling pathway" evidence=IMP] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0016246 "RNA interference" evidence=RCA] [GO:0008283 "cell
proliferation" evidence=IMP] [GO:0009739 "response to gibberellin
stimulus" evidence=IMP] [GO:0048364 "root development"
evidence=IMP] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 Prosite:PS00518 GO:GO:0005524 GO:GO:0005634
GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009733
GO:GO:0046872 GO:GO:0003677 GO:GO:0008283 GO:GO:0008270
GO:GO:0016568 GO:GO:0048364 GO:GO:0009739 GO:GO:0009788
GO:GO:0009736 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
PROSITE:PS00598 HOGENOM:HOG000231124 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
EMBL:AF185578 EMBL:AF185577 EMBL:AK229409 IPI:IPI00521160
PIR:T52301 RefSeq:NP_565587.1 UniGene:At.11745
ProteinModelPortal:Q9S775 SMR:Q9S775 STRING:Q9S775 PaxDb:Q9S775
PRIDE:Q9S775 EnsemblPlants:AT2G25170.1 GeneID:817055
KEGG:ath:AT2G25170 TAIR:At2g25170 InParanoid:Q9S775 OMA:NVVMYFG
PhylomeDB:Q9S775 ProtClustDB:CLSN2688404 Genevestigator:Q9S775
GermOnline:AT2G25170 GO:GO:2000023 Uniprot:Q9S775
Length = 1384
Score = 390 (142.3 bits), Expect = 8.9e-35, P = 8.9e-35
Identities = 114/343 (33%), Positives = 178/343 (51%)
Query: 159 DEDSDF-QPVLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNND 217
D +F + +L PYQL G+NFL + K ILADEMGLGKTIQ+I L L N
Sbjct: 263 DHTPEFLKGLLHPYQLEGLNFLRFSWSKQ-THVILADEMGLGKTIQSIALLASLFEENLI 321
Query: 218 PGPHLIVCPASVLENWERELKKWCPSFSVLQYHGAGRT-AYSRE----LSS------LAK 266
P HL++ P S L NWERE W P +V+ Y G + A RE LS K
Sbjct: 322 P--HLVIAPLSTLRNWEREFATWAPQMNVVMYFGTAQARAVIREHEFYLSKDQKKIKKKK 379
Query: 267 AGLPPP--------FNVLLVCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNS 318
+G F+VLL Y + D +LK +W C+++DE H LK+K+S
Sbjct: 380 SGQISSESKQKRIKFDVLLTSYEMINL-------DSAVLKPIKWECMIVDEGHRLKNKDS 432
Query: 319 YRWKNLMSVARNANQRLMLTGTPLQNDLHELWSLLEFMMPDLFAT-EDVDLK-KLLNGED 376
+ +L + +N R++LTGTPLQN+L EL+ L+ F+ F + E+ + K +N E+
Sbjct: 433 KLFSSLTQYS--SNHRILLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEE 490
Query: 377 RDLIGRMKSILGPFILRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYR-VAIEEYRAVSR 435
+ I R+ +L P +LRR+K DVM+ + PK + + V + Q++ Y+ + Y+ +++
Sbjct: 491 Q--ISRLHKMLAPHLLRRVKKDVMKDMPPKKELILRVDLSSLQKEYYKAIFTRNYQVLTK 548
Query: 436 ARIAKLSDADLATIVGVLPQRQISNYFVQFRKIANHPLLVRRI 478
A++S ++N ++ RK+ HP ++ +
Sbjct: 549 KGGAQIS---------------LNNIMMELRKVCCHPYMLEGV 576
>UNIPROTKB|Q86WJ1 [details] [associations]
symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
1-like" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=IMP] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=TAS] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0006281 "DNA repair" evidence=TAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0006200 "ATP
catabolic process" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
GO:GO:0003677 GO:GO:0006281 EMBL:AL356378 GO:GO:0006338
GO:GO:0004003 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154
CTD:9557 HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV EMBL:AF537213
EMBL:AK001342 EMBL:AK027631 EMBL:EF560738 EMBL:BC001171
EMBL:BC005038 EMBL:BC008649 EMBL:BC043501 EMBL:BC077717
EMBL:AK223496 IPI:IPI00329088 IPI:IPI00854584 IPI:IPI00890729
IPI:IPI00890749 RefSeq:NP_001243265.1 RefSeq:NP_001243266.1
RefSeq:NP_001243267.1 RefSeq:NP_004275.4 RefSeq:NP_078844.2
RefSeq:XP_003960255.1 RefSeq:XP_003960264.1 UniGene:Hs.191164
ProteinModelPortal:Q86WJ1 SMR:Q86WJ1 DIP:DIP-48933N IntAct:Q86WJ1
STRING:Q86WJ1 PhosphoSite:Q86WJ1 DMDM:311033359 PaxDb:Q86WJ1
PRIDE:Q86WJ1 Ensembl:ENST00000369258 Ensembl:ENST00000369259
Ensembl:ENST00000431239 Ensembl:ENST00000579763
Ensembl:ENST00000583055 GeneID:101060601 GeneID:9557
KEGG:hsa:101060601 KEGG:hsa:9557 UCSC:uc001epm.4 UCSC:uc001epo.4
UCSC:uc009wjh.3 GeneCards:GC01P146717 H-InvDB:HIX0000988
H-InvDB:HIX0028745 HGNC:HGNC:1916 HPA:HPA027789 HPA:HPA028670
MIM:613039 neXtProt:NX_Q86WJ1 PharmGKB:PA26452 InParanoid:Q86WJ1
OMA:TCQTIAL PhylomeDB:Q86WJ1 ChiTaRS:CHD1L GenomeRNAi:9557
NextBio:35849 ArrayExpress:Q86WJ1 Bgee:Q86WJ1 CleanEx:HS_CHD1L
Genevestigator:Q86WJ1 Uniprot:Q86WJ1
Length = 897
Score = 386 (140.9 bits), Expect = 1.0e-34, P = 1.0e-34
Identities = 98/265 (36%), Positives = 148/265 (55%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQL GVN+L + G IL DEMGLGKT Q I + L ND GP LI+CP
Sbjct: 46 LRSYQLEGVNWLAQRFHCQ-NGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLILCPL 104
Query: 228 SVLENWERELKKWCPSFSVLQYHG--AGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFER 285
SVL NW+ E++++ P S + Y G R ++L ++ F+VLL Y + +
Sbjct: 105 SVLSNWKEEMQRFAPGLSCVTYAGDKEERACLQQDLKQESR------FHVLLTTYEICLK 158
Query: 286 HSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
D LK + WS +++DEAH LK+++S K L + + L+LTGTP+QN
Sbjct: 159 -------DASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFS--LLLTGTPIQNS 209
Query: 346 LHELWSLLEFMMPDLFATEDVD--LKKLLNGE-DRDLIGRMKSILGPFILRRLKSDVMQQ 402
L EL+SLL F+ PDLF+ E+V +++ + E + + + +L PF+LRR+K++V +
Sbjct: 210 LQELYSLLSFVEPDLFSKEEVGDFIQRYQDIEKESESASELHKLLQPFLLRRVKAEVATE 269
Query: 403 LVPKIQWVEYVTMERPQEDAYRVAI 427
L K + V Y M Q+ Y+ +
Sbjct: 270 LPKKTEVVIYHGMSALQKKYYKAIL 294
Score = 215 (80.7 bits), Expect = 4.2e-14, P = 4.2e-14
Identities = 61/185 (32%), Positives = 98/185 (52%)
Query: 293 DRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSL 352
D LK + WS +++DEAH LK+++S K L + + L+LTGTP+QN L EL+SL
Sbjct: 159 DASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFS--LLLTGTPIQNSLQELYSL 216
Query: 353 LEFMMPDLFATEDVD--LKKLLNGE-DRDLIGRMKSILGPFILRRLKSDVMQQLVPKIQW 409
L F+ PDLF+ E+V +++ + E + + + +L PF+LRR+K++V +L K +
Sbjct: 217 LSFVEPDLFSKEEVGDFIQRYQDIEKESESASELHKLLQPFLLRRVKAEVATELPKKTEV 276
Query: 410 VEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQISNYFVQFRKIA 469
V Y M Q+ Y+ + + D D A + ++ N Q RK
Sbjct: 277 VIYHGMSALQKKYYKAIL-------------MKDLD-AFENETAKKVKLQNILSQLRKCV 322
Query: 470 NHPLL 474
+HP L
Sbjct: 323 DHPYL 327
>POMBASE|SPAC1783.05 [details] [associations]
symbol:hrp1 "ATP-dependent DNA helicase Hrp1"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000779 "condensed chromosome, centromeric
region" evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004003 "ATP-dependent
DNA helicase activity" evidence=ISM] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IMP] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IMP] [GO:0007076 "mitotic chromosome
condensation" evidence=IMP] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IDA] [GO:0016592 "mediator complex"
evidence=IPI] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
silencing at centromere" evidence=IMP] [GO:0035067 "negative
regulation of histone acetylation" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0048096 "chromatin-mediated maintenance
of transcription" evidence=TAS] [GO:0060303 "regulation of
nucleosome density" evidence=IMP] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 PomBase:SPAC1783.05 Pfam:PF00385 GO:GO:0005524
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0045944
GO:GO:0030466 GO:GO:0000122 GO:GO:0000790 GO:GO:0030702
GO:GO:0004003 GO:GO:0007076 GO:GO:0048096 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0000779 GO:GO:0035067 InterPro:IPR023780
PROSITE:PS00598 GO:GO:0016592 GO:GO:0006369 KO:K11367
HOGENOM:HOG000207917 OrthoDB:EOG4TF3TB EMBL:X99021 EMBL:AB027852
PIR:T43334 PIR:T50107 RefSeq:NP_593660.1 ProteinModelPortal:Q9US25
MINT:MINT-4979817 STRING:Q9US25 EnsemblFungi:SPAC1783.05.1
GeneID:2542363 KEGG:spo:SPAC1783.05 OMA:VERVIKW NextBio:20803422
GO:GO:0060303 Uniprot:Q9US25
Length = 1373
Score = 389 (142.0 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 109/311 (35%), Positives = 163/311 (52%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
++ +QL G+N++ L+ + G ILADEMGLGKT+Q + +L L H GP LIV P
Sbjct: 390 IRDFQLTGINWMAYLWHRNENG-ILADEMGLGKTVQTVCFLSYLVHSLKQHGPFLIVVPL 448
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRT-AYSRELSS-LAKAGLPPPFNVLLVCYSLFER 285
S + W+ L W P + + Y G + A RE L+ FN+LL Y +
Sbjct: 449 STVPAWQETLANWTPDLNSICYTGNTESRANIREYEFYLSTNSRKLKFNILLTTYEYILK 508
Query: 286 HSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
D++ L RW + +DEAH LK+ S ++ L S R AN RL++TGTPLQN+
Sbjct: 509 -------DKQELNNIRWQYLAIDEAHRLKNSESSLYETL-SQFRTAN-RLLITGTPLQNN 559
Query: 346 LHELWSLLEFMMPDLFATED-VDLKKLLNGEDRDLIGRMKSILGPFILRRLKSDVMQQLV 404
L EL SL+ F+MP F D ++ + ++RD I ++ L PFILRRLK DV + L
Sbjct: 560 LKELASLVNFLMPGKFYIRDELNFDQPNAEQERD-IRDLQERLQPFILRRLKKDVEKSLP 618
Query: 405 PKIQWVEYVTMERPQEDAYR-VAIEEYRAVSRARIAKLSDADLATIVGVLPQRQISNYFV 463
K + + V + Q + Y+ + + YRA++ + G Q + N V
Sbjct: 619 SKSERILRVELSDMQTEWYKNILTKNYRALTGHTDGR----------G---QLSLLNIVV 665
Query: 464 QFRKIANHPLL 474
+ +K++NHP L
Sbjct: 666 ELKKVSNHPYL 676
>UNIPROTKB|F1SSZ2 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:FP102454 Ensembl:ENSSSCT00000019561 Uniprot:F1SSZ2
Length = 1667
Score = 390 (142.3 bits), Expect = 1.2e-34, P = 1.2e-34
Identities = 109/341 (31%), Positives = 179/341 (52%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L PYQL G+N+L + +G ILADEMGLGKT+Q I +L L + GP+L+ P
Sbjct: 616 LHPYQLEGLNWLRFSWAQG-TDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPL 674
Query: 228 SVLENWERELKKWCPSFSVLQYHG--AGRTA-----YSRELSSLA--------KAGLPPP 272
S + NWERE + W P F V+ Y G R+ +S E +++ K +
Sbjct: 675 STIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIK 734
Query: 273 FNVLLVCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNAN 332
F+VLL Y L ++ D+ IL W+C+++DEAH LK+ S ++ L S +
Sbjct: 735 FHVLLTSYELI---TI----DQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSY--KID 785
Query: 333 QRLMLTGTPLQNDLHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFIL 392
+L+LTGTPLQN+L EL+ LL F+ P+ F + L++ + D I ++ +LGP +L
Sbjct: 786 YKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHML 845
Query: 393 RRLKSDVMQQLVPKIQWVEYVTMERPQEDAYR-VAIEEYRAVSRARIAKLSDADLATIVG 451
RRLK+DV + + K + + V + + Q+ Y+ + + A++ +K ++ +
Sbjct: 846 RRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALN----SKGGGNQVSLLNI 901
Query: 452 VLPQRQISNYFVQFRKIA-NHPLLVRRIYSDDDVVRFAKKL 491
++ ++ N+ F A P+L Y +V+ + KL
Sbjct: 902 MMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKL 942
>UNIPROTKB|F1RIM3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:FP102454 Ensembl:ENSSSCT00000003736 Uniprot:F1RIM3
Length = 1723
Score = 390 (142.3 bits), Expect = 1.2e-34, P = 1.2e-34
Identities = 109/341 (31%), Positives = 179/341 (52%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L PYQL G+N+L + +G ILADEMGLGKT+Q I +L L + GP+L+ P
Sbjct: 632 LHPYQLEGLNWLRFSWAQG-TDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPL 690
Query: 228 SVLENWERELKKWCPSFSVLQYHG--AGRTA-----YSRELSSLA--------KAGLPPP 272
S + NWERE + W P F V+ Y G R+ +S E +++ K +
Sbjct: 691 STIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIK 750
Query: 273 FNVLLVCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNAN 332
F+VLL Y L ++ D+ IL W+C+++DEAH LK+ S ++ L S +
Sbjct: 751 FHVLLTSYELI---TI----DQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSY--KID 801
Query: 333 QRLMLTGTPLQNDLHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFIL 392
+L+LTGTPLQN+L EL+ LL F+ P+ F + L++ + D I ++ +LGP +L
Sbjct: 802 YKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHML 861
Query: 393 RRLKSDVMQQLVPKIQWVEYVTMERPQEDAYR-VAIEEYRAVSRARIAKLSDADLATIVG 451
RRLK+DV + + K + + V + + Q+ Y+ + + A++ +K ++ +
Sbjct: 862 RRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALN----SKGGGNQVSLLNI 917
Query: 452 VLPQRQISNYFVQFRKIA-NHPLLVRRIYSDDDVVRFAKKL 491
++ ++ N+ F A P+L Y +V+ + KL
Sbjct: 918 MMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKL 958
>UNIPROTKB|E2R1M3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:AAEX03003895 EMBL:AAEX03003896 EMBL:AAEX03003897
Ensembl:ENSCAFT00000031086 Uniprot:E2R1M3
Length = 1812
Score = 390 (142.3 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 109/341 (31%), Positives = 179/341 (52%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L PYQL G+N+L + +G ILADEMGLGKT+Q I +L L + GP+L+ P
Sbjct: 563 LHPYQLEGLNWLRFSWAQG-TDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPL 621
Query: 228 SVLENWERELKKWCPSFSVLQYHG--AGRTA-----YSRELSSLA--------KAGLPPP 272
S + NWERE + W P F V+ Y G R+ +S E +++ K +
Sbjct: 622 STIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIK 681
Query: 273 FNVLLVCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNAN 332
F+VLL Y L ++ D+ IL W+C+++DEAH LK+ S ++ L S +
Sbjct: 682 FHVLLTSYELI---TI----DQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSY--KID 732
Query: 333 QRLMLTGTPLQNDLHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFIL 392
+L+LTGTPLQN+L EL+ LL F+ P+ F + L++ + D I ++ +LGP +L
Sbjct: 733 YKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHML 792
Query: 393 RRLKSDVMQQLVPKIQWVEYVTMERPQEDAYR-VAIEEYRAVSRARIAKLSDADLATIVG 451
RRLK+DV + + K + + V + + Q+ Y+ + + A++ +K ++ +
Sbjct: 793 RRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALN----SKGGGNQVSLLNI 848
Query: 452 VLPQRQISNYFVQFRKIA-NHPLLVRRIYSDDDVVRFAKKL 491
++ ++ N+ F A P+L Y +V+ + KL
Sbjct: 849 MMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKL 889
>UNIPROTKB|F1MFF9 [details] [associations]
symbol:Bt.62145 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:DAAA02043090 IPI:IPI00688794
Ensembl:ENSBTAT00000010688 Uniprot:F1MFF9
Length = 1852
Score = 390 (142.3 bits), Expect = 1.4e-34, P = 1.4e-34
Identities = 109/341 (31%), Positives = 179/341 (52%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L PYQL G+N+L + +G ILADEMGLGKT+Q I +L L + GP+L+ P
Sbjct: 646 LHPYQLEGLNWLRFSWAQG-TDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPL 704
Query: 228 SVLENWERELKKWCPSFSVLQYHG--AGRTA-----YSRELSSLA--------KAGLPPP 272
S + NWERE + W P F V+ Y G R+ +S E +++ K +
Sbjct: 705 STIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIK 764
Query: 273 FNVLLVCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNAN 332
F+VLL Y L ++ D+ IL W+C+++DEAH LK+ S ++ L S +
Sbjct: 765 FHVLLTSYELI---TI----DQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSY--KID 815
Query: 333 QRLMLTGTPLQNDLHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFIL 392
+L+LTGTPLQN+L EL+ LL F+ P+ F + L++ + D I ++ +LGP +L
Sbjct: 816 YKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHML 875
Query: 393 RRLKSDVMQQLVPKIQWVEYVTMERPQEDAYR-VAIEEYRAVSRARIAKLSDADLATIVG 451
RRLK+DV + + K + + V + + Q+ Y+ + + A++ +K ++ +
Sbjct: 876 RRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALN----SKGGGNQVSLLNI 931
Query: 452 VLPQRQISNYFVQFRKIA-NHPLLVRRIYSDDDVVRFAKKL 491
++ ++ N+ F A P+L Y +V+ + KL
Sbjct: 932 MMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKL 972
>UNIPROTKB|Q8TDI0 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
EMBL:AF425231 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AL031847
GO:GO:0008026 InterPro:IPR023780 PROSITE:PS00598
HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 OrthoDB:EOG4WH8JX
EMBL:AL035406 EMBL:AL117491 EMBL:AB007913 IPI:IPI00152535
PIR:T17269 RefSeq:NP_056372.1 UniGene:Hs.522898
ProteinModelPortal:Q8TDI0 SMR:Q8TDI0 IntAct:Q8TDI0 STRING:Q8TDI0
PhosphoSite:Q8TDI0 DMDM:51701343 PaxDb:Q8TDI0 PRIDE:Q8TDI0
DNASU:26038 Ensembl:ENST00000262450 GeneID:26038 KEGG:hsa:26038
UCSC:uc001amb.2 CTD:26038 GeneCards:GC01M006096 HGNC:HGNC:16816
HPA:HPA015809 MIM:610771 neXtProt:NX_Q8TDI0 PharmGKB:PA134969178
InParanoid:Q8TDI0 KO:K14435 OMA:KRIDDGD PhylomeDB:Q8TDI0
ChiTaRS:CHD5 GenomeRNAi:26038 NextBio:47863 ArrayExpress:Q8TDI0
Bgee:Q8TDI0 CleanEx:HS_CHD5 Genevestigator:Q8TDI0
GermOnline:ENSG00000116254 Uniprot:Q8TDI0
Length = 1954
Score = 390 (142.3 bits), Expect = 1.5e-34, P = 1.5e-34
Identities = 109/341 (31%), Positives = 179/341 (52%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L PYQL G+N+L + +G ILADEMGLGKT+Q I +L L + GP+L+ P
Sbjct: 700 LHPYQLEGLNWLRFSWAQG-TDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPL 758
Query: 228 SVLENWERELKKWCPSFSVLQYHG--AGRTA-----YSRELSSLA--------KAGLPPP 272
S + NWERE + W P F V+ Y G R+ +S E +++ K +
Sbjct: 759 STIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIK 818
Query: 273 FNVLLVCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNAN 332
F+VLL Y L ++ D+ IL W+C+++DEAH LK+ S ++ L S +
Sbjct: 819 FHVLLTSYELI---TI----DQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSY--KID 869
Query: 333 QRLMLTGTPLQNDLHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFIL 392
+L+LTGTPLQN+L EL+ LL F+ P+ F + L++ + D I ++ +LGP +L
Sbjct: 870 YKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHML 929
Query: 393 RRLKSDVMQQLVPKIQWVEYVTMERPQEDAYR-VAIEEYRAVSRARIAKLSDADLATIVG 451
RRLK+DV + + K + + V + + Q+ Y+ + + A++ +K ++ +
Sbjct: 930 RRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALN----SKGGGNQVSLLNI 985
Query: 452 VLPQRQISNYFVQFRKIA-NHPLLVRRIYSDDDVVRFAKKL 491
++ ++ N+ F A P+L Y +V+ + KL
Sbjct: 986 MMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKL 1026
>UNIPROTKB|F1NH78 [details] [associations]
symbol:F1NH78 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:AADN02040929 EMBL:AADN02040930 IPI:IPI00571784
Ensembl:ENSGALT00000023340 ArrayExpress:F1NH78 Uniprot:F1NH78
Length = 1781
Score = 389 (142.0 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 109/342 (31%), Positives = 180/342 (52%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLM-LLKHLNNDPGPHLIVCP 226
L PYQL G+N+L + +G ILADEMGLGKT+Q I +L L K + GP+L+ P
Sbjct: 631 LHPYQLEGLNWLRFSWAQG-TDTILADEMGLGKTVQTIVFLYSLYKEQGHSKGPYLVSAP 689
Query: 227 ASVLENWERELKKWCPSFSVLQYHG--AGRTA-----YSRELSSLA--------KAGLPP 271
S + NWERE + W P F V+ Y G R+ +S E +++ K
Sbjct: 690 LSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEAQI 749
Query: 272 PFNVLLVCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNA 331
F+VLL Y L ++ D+ +L W+C+++DEAH LK+ S ++ L S
Sbjct: 750 KFHVLLTSYELI---TI----DQAVLGSIEWACLVVDEAHRLKNNQSKFFRVLNSY--KI 800
Query: 332 NQRLMLTGTPLQNDLHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFI 391
+ +L+LTGTPLQN+L EL+ LL F+ P+ F + L++ + D I ++ +LGP +
Sbjct: 801 DYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHM 860
Query: 392 LRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYR-VAIEEYRAVSRARIAKLSDADLATIV 450
LRRLK+DV + + K + + V + + Q+ Y+ + + A++ +K ++ +
Sbjct: 861 LRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALN----SKGGGNQVSLLN 916
Query: 451 GVLPQRQISNYFVQFRKIA-NHPLLVRRIYSDDDVVRFAKKL 491
++ ++ N+ F A P+L Y + +V+ + KL
Sbjct: 917 IMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGNSLVKSSGKL 958
>TAIR|locus:2062999 [details] [associations]
symbol:BRM "AT2G46020" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0004386
"helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0010199 "organ boundary specification between
lateral organs and the meristem" evidence=IGI] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=NAS;TAS] [GO:0040029
"regulation of gene expression, epigenetic" evidence=RCA;IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00951
GO:GO:0005829 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0004386
EMBL:AC005397 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0043044
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 EMBL:AC004665
EMBL:AJ703891 IPI:IPI00529654 IPI:IPI00541940 PIR:G84897
RefSeq:NP_182126.2 RefSeq:NP_973695.1 UniGene:At.48598
ProteinModelPortal:Q6EVK6 SMR:Q6EVK6 IntAct:Q6EVK6 STRING:Q6EVK6
PaxDb:Q6EVK6 PRIDE:Q6EVK6 EnsemblPlants:AT2G46020.2 GeneID:819210
KEGG:ath:AT2G46020 TAIR:At2g46020 HOGENOM:HOG000029719
InParanoid:Q6EVK6 KO:K11647 OMA:EMNAPKE PhylomeDB:Q6EVK6
ProtClustDB:CLSN2681222 ArrayExpress:Q6EVK6 Genevestigator:Q6EVK6
GO:GO:0010199 GO:GO:0040029 Uniprot:Q6EVK6
Length = 2193
Score = 390 (142.3 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 126/349 (36%), Positives = 171/349 (48%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQLVG+ ++L LY + G ILADEMGLGKT+Q + + L + GPHLI+ P
Sbjct: 981 LRDYQLVGLQWMLSLYNNKLNG-ILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPN 1039
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
+VL NW+ EL W PS S + Y G + S+ S A FNVL+ Y F +
Sbjct: 1040 AVLVNWKSELHTWLPSVSCIYYVGT-KDQRSKLFSQEVCA---MKFNVLVTTYE-FIMY- 1093
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
DR L + W +++DEA +KD+ S ++L +RL+LTGTPLQNDL
Sbjct: 1094 -----DRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRY--RCQRRLLLTGTPLQNDLK 1146
Query: 348 ELWSLLEFMMPDLF----ATED---VDLKK---LLNGEDRDL--------IGRMKSILGP 389
ELWSLL ++PD+F A D +K N ED L I R+ IL P
Sbjct: 1147 ELWSLLNLLLPDVFDNRKAFHDWFAQPFQKEGPAHNIEDDWLETEKKVIVIHRLHQILEP 1206
Query: 390 FILRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATI 449
F+LRR DV L K+ V M Q Y + +A R+ D L
Sbjct: 1207 FMLRRRVEDVEGSLPAKVSVVLRCRMSAIQSAVY----DWIKATGTLRVDP-DDEKLRAQ 1261
Query: 450 VGVLPQ----RQISNYFVQFRKIANHPLLVRRIYSD---DDVVRFAKKL 491
+ Q R ++N ++ RK NHPLL ++D D +VR KL
Sbjct: 1262 KNPIYQAKIYRTLNNRCMELRKACNHPLLNYPYFNDFSKDFLVRSCGKL 1310
>TAIR|locus:2062840 [details] [associations]
symbol:SYD "SPLAYED" species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009908 "flower development"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=IPI] [GO:0010199 "organ
boundary specification between lateral organs and the meristem"
evidence=IGI] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=NAS] [GO:0040029 "regulation of gene expression,
epigenetic" evidence=RCA;IMP] [GO:0009611 "response to wounding"
evidence=IEP] [GO:0005829 "cytosol" evidence=IDA] [GO:0000226
"microtubule cytoskeleton organization" evidence=RCA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006306
"DNA methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0009845
"seed germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0016567
"protein ubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] [GO:0050826 "response to
freezing" evidence=RCA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SMART:SM00951 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GO:GO:0009611 GO:GO:0006355
GO:GO:0003677 GO:GO:0003682 GO:GO:0016887 GO:GO:0004386
GO:GO:0009908 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043044 GO:GO:0010199 GO:GO:0040029 InterPro:IPR014012
PROSITE:PS51204 IPI:IPI00516285 RefSeq:NP_850116.1 UniGene:At.22414
PRIDE:F4IHS2 EnsemblPlants:AT2G28290.1 GeneID:817375
KEGG:ath:AT2G28290 OMA:SDLYAIS Uniprot:F4IHS2
Length = 3574
Score = 392 (143.0 bits), Expect = 1.9e-34, P = 1.9e-34
Identities = 111/332 (33%), Positives = 174/332 (52%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQ+ G+ +L+ LY + G ILADEMGLGKT+Q I+ + L ND GP L+V P+
Sbjct: 754 LREYQMNGLRWLVSLYNNHLNG-ILADEMGLGKTVQVISLICYLMETKNDRGPFLVVVPS 812
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
SVL W+ E+ W PS + Y G R+L + + FNVLL Y
Sbjct: 813 SVLPGWQSEINFWAPSIHKIVY--CGTPDERRKL--FKEQIVHQKFNVLLTTYEY----- 863
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
+ K DR L + W +++DE H +K+ + +L ++ RL+LTGTPLQN+L
Sbjct: 864 LMNKHDRPKLSKIHWHYIIIDEGHRIKNASCKLNADLKHYV--SSHRLLLTGTPLQNNLE 921
Query: 348 ELWSLLEFMMPDLF-ATEDVD--------------LKKLLNGEDRDL--IGRMKSILGPF 390
ELW+LL F++P++F ++ED ++ L E+ +L I R+ +L PF
Sbjct: 922 ELWALLNFLLPNIFNSSEDFSQWFNKPFQSNGESSAEEALLSEEENLLIINRLHQVLRPF 981
Query: 391 ILRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIV 450
+LRRLK V +L KI+ + R + AY+ + + ++ D +L +I
Sbjct: 982 VLRRLKHKVENELPEKIE-----RLIRCEASAYQKLL----------MKRVED-NLGSI- 1024
Query: 451 GVLPQRQISNYFVQFRKIANHPLLVRRIYSDD 482
G R + N ++ R I NHP L +++S++
Sbjct: 1025 GNAKSRAVHNSVMELRNICNHPYL-SQLHSEE 1055
>UNIPROTKB|H0YJG4 [details] [associations]
symbol:CHD8 "Chromodomain-helicase-DNA-binding protein 8"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AL135744 EMBL:AL161747
HGNC:HGNC:20153 Ensembl:ENST00000555935 Uniprot:H0YJG4
Length = 873
Score = 383 (139.9 bits), Expect = 2.0e-34, P = 2.0e-34
Identities = 107/316 (33%), Positives = 162/316 (51%)
Query: 168 LKPYQLVGVNFLLL-LYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCP 226
L+ YQL GVN+LL Y + ILADEMGLGKTIQ+I +L + ++ GP L++ P
Sbjct: 37 LREYQLEGVNWLLFNWYNR--QNCILADEMGLGKTIQSIAFLQEVYNVGIH-GPFLVIAP 93
Query: 227 ASVLENWERELKKWCPSFSVLQYHG--AGRTAYSR-ELSSLAKAG-LPP---PFNVLLVC 279
S + NWERE W + + YHG A R + E+ G L P F+ L+
Sbjct: 94 LSTITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITT 152
Query: 280 YSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTG 339
+ + D L+ W CV++DEAH LK++N +L + + +++LTG
Sbjct: 153 FEMI-------LSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHM--DLEHKVLLTG 203
Query: 340 TPLQNDLHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFILRRLKSDV 399
TPLQN + EL+SLL F+ P F +E LK + + + + ++++IL P +LRRLK DV
Sbjct: 204 TPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGDLKTEEQVQKLQAILKPMMLRRLKEDV 263
Query: 400 MQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQIS 459
+ L PK + + V + Q+ YR +E+ + LS G +
Sbjct: 264 EKNLAPKQETIIEVELTNIQKKYYRAILEK-------NFSFLSKG-----AGHTNMPNLL 311
Query: 460 NYFVQFRKIANHPLLV 475
N ++ RK NHP L+
Sbjct: 312 NTMMELRKCCNHPYLI 327
>POMBASE|SPAC1250.01 [details] [associations]
symbol:snf21 "ATP-dependent DNA helicase Snf21"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=IC] [GO:0000991 "core RNA polymerase II binding
transcription factor activity" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IC] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=ISO] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0016586 "RSC complex"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 PomBase:SPAC1250.01 GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0006338 GO:GO:0000790
GO:GO:0004003 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016586 GO:GO:0000991 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 HOGENOM:HOG000172362
KO:K11786 EMBL:AB162438 PIR:T37561 RefSeq:NP_594861.1
ProteinModelPortal:Q9UTN6 DIP:DIP-48388N STRING:Q9UTN6
EnsemblFungi:SPAC1250.01.1 GeneID:2542638 KEGG:spo:SPAC1250.01
OMA:WAPSISA OrthoDB:EOG4D565R NextBio:20803687 Uniprot:Q9UTN6
Length = 1199
Score = 383 (139.9 bits), Expect = 3.9e-34, P = 3.9e-34
Identities = 114/358 (31%), Positives = 175/358 (48%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
LK YQL G+ +++ LY + G ILADEMGLGKTIQ I+ + L GP L++ P
Sbjct: 417 LKEYQLRGLQWMISLYNNHLNG-ILADEMGLGKTIQTISLITHLIEKKRQNGPFLVIVPL 475
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
S L NW E ++W PS + Y G + + L + F VLL Y +
Sbjct: 476 STLTNWTMEFERWAPSIVKIVYKGPPQVR--KALHPQVRHS---NFQVLLTTYEYIIK-- 528
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
DR +L R +W +++DE H +K+ S + N ++ ++ RL+LTGTPLQN+L
Sbjct: 529 -----DRPLLSRIKWIYMIIDEGHRMKNTQS-KLTNTLTTYYSSRYRLILTGTPLQNNLP 582
Query: 348 ELWSLLEFMMPDLFA---------------TEDVDLKKLLNGEDRDLIGRMKSILGPFIL 392
ELW+LL F++P +F T D +L E +I R+ +L PF+L
Sbjct: 583 ELWALLNFVLPRIFNSIKSFDEWFNTPFANTGGQDKMELTEEESLLVIRRLHKVLRPFLL 642
Query: 393 RRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGV 452
RRLK DV +L K++ V M Q+ Y Y+ + + + + DA G+
Sbjct: 643 RRLKKDVEAELPDKVEKVIRCQMSGLQQKLY------YQ-MKKHGMLYVEDAKRGK-TGI 694
Query: 453 LPQRQISNYFVQFRKIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFECTLERVIEEL 510
+ + N +Q +KI NHP + + D F + + FE L+R++ +L
Sbjct: 695 ---KGLQNTVMQLKKICNHPFVFEDVERSIDPTGFNYDMLWRVSGKFEL-LDRILPKL 748
>TAIR|locus:2150270 [details] [associations]
symbol:CHR23 "chromatin remodeling 23" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006259 "DNA metabolic process" evidence=RCA] [GO:0007062
"sister chromatid cohesion" evidence=RCA] [GO:0007126 "meiosis"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0016567
"protein ubiquitination" evidence=RCA] [GO:0016571 "histone
methylation" evidence=RCA] [GO:0016579 "protein deubiquitination"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0033044 "regulation of chromosome organization"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 EMBL:CP002688 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K11647
OMA:WAPSISA IPI:IPI00536400 RefSeq:NP_197432.2 UniGene:At.43995
ProteinModelPortal:F4K128 SMR:F4K128 PRIDE:F4K128
EnsemblPlants:AT5G19310.1 GeneID:832051 KEGG:ath:AT5G19310
PhylomeDB:F4K128 Uniprot:F4K128
Length = 1064
Score = 382 (139.5 bits), Expect = 4.0e-34, P = 4.0e-34
Identities = 110/319 (34%), Positives = 156/319 (48%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQL G+ +++ LY G ILADEMGLGKTIQ I + L + GPHLI+ P
Sbjct: 386 LRSYQLEGLQWMVSLYNNDYNG-ILADEMGLGKTIQTIALIAYLLESKDLHGPHLILAPK 444
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
+VL NWE E W PS S Y G+ E+ + G FNVL+ Y L R
Sbjct: 445 AVLPNWENEFALWAPSISAFLYDGSKEKR--TEIRARIAGG---KFNVLITHYDLIMR-- 497
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
D+ LK+ W+ +++DE H LK+ K L + R +RL+LTGTP+QN L
Sbjct: 498 -----DKAFLKKIDWNYMIVDEGHRLKNHECALAKTLGTGYR-IKRRLLLTGTPIQNSLQ 551
Query: 348 ELWSLLEFMMPDLFAT------------EDVDLKKLLNGEDRDLIGRMKSILGPFILRRL 395
ELWSLL F++P +F + + L + E+ +I R+ ++ PF+LRR
Sbjct: 552 ELWSLLNFLLPHIFNSIHNFEEWFNTPFAECGSASLTDEEELLIINRLHHVIRPFLLRRK 611
Query: 396 KSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQ 455
KS+V + L K Q + M Q+ Y+ + V R + G
Sbjct: 612 KSEVEKFLPGKTQVILKCDMSAWQKLYYKQVTD----VGRVGLHS----------GNGKS 657
Query: 456 RQISNYFVQFRKIANHPLL 474
+ + N +Q RK NHP L
Sbjct: 658 KSLQNLTMQLRKCCNHPYL 676
>UNIPROTKB|F1MLB2 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
[GO:0045945 "positive regulation of transcription from RNA
polymerase III promoter" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035064 "methylated histone
residue binding" evidence=IEA] [GO:0030178 "negative regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003678 "DNA helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0002039 "p53 binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
InterPro:IPR023780 GO:GO:0008094 GeneTree:ENSGT00560000077077
OMA:FLAYMED EMBL:DAAA02028315 EMBL:DAAA02028312 EMBL:DAAA02028313
EMBL:DAAA02028314 IPI:IPI01017729 Ensembl:ENSBTAT00000027215
Uniprot:F1MLB2
Length = 2537
Score = 387 (141.3 bits), Expect = 4.4e-34, P = 4.4e-34
Identities = 109/333 (32%), Positives = 167/333 (50%)
Query: 168 LKPYQLVGVNFLLL-LYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCP 226
L+ YQL GVN+LL Y + ILADEMGLGKTIQ+I +L + ++ GP L++ P
Sbjct: 764 LREYQLEGVNWLLFNWYNR--QNCILADEMGLGKTIQSIAFLQEVYNVGIH-GPFLVIAP 820
Query: 227 ASVLENWERELKKWCPSFSVLQYHG--AGRTAYSR-ELSSLAKAG-LPP---PFNVLLVC 279
S + NWERE W + + YHG A R + E+ G L P F+ L+
Sbjct: 821 LSTITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITT 879
Query: 280 YSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTG 339
+ + D L+ W CV++DEAH LK++N +L + + +++LTG
Sbjct: 880 FEMI-------LSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHM--DLEHKVLLTG 930
Query: 340 TPLQNDLHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFILRRLKSDV 399
TPLQN + EL+SLL F+ P F +E LK + + + + ++++IL P +LRRLK DV
Sbjct: 931 TPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGDLKTEEQVQKLQAILKPMMLRRLKEDV 990
Query: 400 MQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQIS 459
+ L PK + + V + Q+ YR +E+ + LS G +
Sbjct: 991 EKNLAPKQETIIEVELTNIQKKYYRAILEK-------NFSFLSKG-----AGHTNMPNLL 1038
Query: 460 NYFVQFRKIANHPLLVRRIYSDDDVVRFAKKLH 492
N ++ RK NHP L+ + + F + H
Sbjct: 1039 NTMMELRKCCNHPYLINAGAEEKILTEFREACH 1071
>UNIPROTKB|F1S8J5 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
[GO:0045945 "positive regulation of transcription from RNA
polymerase III promoter" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035064 "methylated histone
residue binding" evidence=IEA] [GO:0030178 "negative regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003678 "DNA helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0002039 "p53 binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
InterPro:IPR023780 GO:GO:0008094 GeneTree:ENSGT00560000077077
OMA:FLAYMED EMBL:FP340603 Ensembl:ENSSSCT00000002379
ArrayExpress:F1S8J5 Uniprot:F1S8J5
Length = 2569
Score = 387 (141.3 bits), Expect = 4.4e-34, P = 4.4e-34
Identities = 109/333 (32%), Positives = 167/333 (50%)
Query: 168 LKPYQLVGVNFLLL-LYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCP 226
L+ YQL GVN+LL Y + ILADEMGLGKTIQ+I +L + ++ GP L++ P
Sbjct: 811 LREYQLEGVNWLLFNWYNR--QNCILADEMGLGKTIQSIAFLQEVYNVGIH-GPFLVIAP 867
Query: 227 ASVLENWERELKKWCPSFSVLQYHG--AGRTAYSR-ELSSLAKAG-LPP---PFNVLLVC 279
S + NWERE W + + YHG A R + E+ G L P F+ L+
Sbjct: 868 LSTITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITT 926
Query: 280 YSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTG 339
+ + D L+ W CV++DEAH LK++N +L + + +++LTG
Sbjct: 927 FEMI-------LSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHM--DLEHKVLLTG 977
Query: 340 TPLQNDLHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFILRRLKSDV 399
TPLQN + EL+SLL F+ P F +E LK + + + + ++++IL P +LRRLK DV
Sbjct: 978 TPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGDLKTEEQVQKLQAILKPMMLRRLKEDV 1037
Query: 400 MQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQIS 459
+ L PK + + V + Q+ YR +E+ + LS G +
Sbjct: 1038 EKNLAPKQETIIEVELTNIQKKYYRAILEK-------NFSFLSKG-----AGHTNMPNLL 1085
Query: 460 NYFVQFRKIANHPLLVRRIYSDDDVVRFAKKLH 492
N ++ RK NHP L+ + + F + H
Sbjct: 1086 NTMMELRKCCNHPYLINAGAEEKILTEFREACH 1118
>UNIPROTKB|E2QUS7 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:FLAYMED EMBL:AAEX03009852
Ensembl:ENSCAFT00000009065 Uniprot:E2QUS7
Length = 2586
Score = 387 (141.3 bits), Expect = 4.5e-34, P = 4.5e-34
Identities = 109/333 (32%), Positives = 167/333 (50%)
Query: 168 LKPYQLVGVNFLLL-LYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCP 226
L+ YQL GVN+LL Y + ILADEMGLGKTIQ+I +L + ++ GP L++ P
Sbjct: 811 LREYQLEGVNWLLFNWYNR--QNCILADEMGLGKTIQSIAFLQEVYNVGIH-GPFLVIAP 867
Query: 227 ASVLENWERELKKWCPSFSVLQYHG--AGRTAYSR-ELSSLAKAG-LPP---PFNVLLVC 279
S + NWERE W + + YHG A R + E+ G L P F+ L+
Sbjct: 868 LSTITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITT 926
Query: 280 YSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTG 339
+ + D L+ W CV++DEAH LK++N +L + + +++LTG
Sbjct: 927 FEMI-------LSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHM--DLEHKVLLTG 977
Query: 340 TPLQNDLHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFILRRLKSDV 399
TPLQN + EL+SLL F+ P F +E LK + + + + ++++IL P +LRRLK DV
Sbjct: 978 TPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGDLKTEEQVQKLQAILKPMMLRRLKEDV 1037
Query: 400 MQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQIS 459
+ L PK + + V + Q+ YR +E+ + LS G +
Sbjct: 1038 EKNLAPKQETIIEVELTNIQKKYYRAILEK-------NFSFLSKG-----AGHTNMPNLL 1085
Query: 460 NYFVQFRKIANHPLLVRRIYSDDDVVRFAKKLH 492
N ++ RK NHP L+ + + F + H
Sbjct: 1086 NTMMELRKCCNHPYLINAGAEEKILTEFREACH 1118
>UNIPROTKB|F1NS62 [details] [associations]
symbol:CHD1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0006974 GO:GO:0006338
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
OMA:TCQTIAL GeneTree:ENSGT00670000098110 EMBL:AADN02037964
EMBL:AADN02037962 EMBL:AADN02037963 IPI:IPI00573125
Ensembl:ENSGALT00000024254 Uniprot:F1NS62
Length = 895
Score = 380 (138.8 bits), Expect = 4.5e-34, P = 4.5e-34
Identities = 98/264 (37%), Positives = 147/264 (55%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLL-KHLNNDPGPHLIVCP 226
L+PYQL GVN+L+ Y+ G IL DEMGLGKT Q I+ L+ L K L N LI+CP
Sbjct: 46 LRPYQLDGVNWLVQCYQVQ-HGCILGDEMGLGKTCQTISLLLYLTKKLTNKERS-LILCP 103
Query: 227 ASVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERH 286
SVL NW+ EL+++ P S + Y G Y + +L + F VLL Y + +
Sbjct: 104 LSVLSNWKEELERFAPGLSFVTYVGNKEERYKLQ-QNLKEQS---HFRVLLTTYEICLK- 158
Query: 287 SVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDL 346
D LK + W+ +++DEAH LK++NS ++ L + + L+LTGTP+QN L
Sbjct: 159 ------DAAFLKFFDWAALVVDEAHRLKNQNSLLYETLTELPVGFS--LLLTGTPIQNSL 210
Query: 347 HELWSLLEFMMPDLFATEDV-DLKKLLNGEDRDL--IGRMKSILGPFILRRLKSDVMQQL 403
EL+SLL F+ PD+F + V + + +++ + ++L PF+LRR+KS+V L
Sbjct: 211 QELYSLLSFIEPDIFPRKQVKEFVEYYQAVEKESEPAKELHNLLQPFLLRRVKSEVTADL 270
Query: 404 VPKIQWVEYVTMERPQEDAYRVAI 427
K++ V Y M Q Y+ +
Sbjct: 271 PKKVEVVLYHGMSALQRKYYKAIL 294
Score = 217 (81.4 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 68/222 (30%), Positives = 112/222 (50%)
Query: 293 DRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSL 352
D LK + W+ +++DEAH LK++NS ++ L + + L+LTGTP+QN L EL+SL
Sbjct: 159 DAAFLKFFDWAALVVDEAHRLKNQNSLLYETLTELPVGFS--LLLTGTPIQNSLQELYSL 216
Query: 353 LEFMMPDLFATEDV-DLKKLLNGEDRDL--IGRMKSILGPFILRRLKSDVMQQLVPKIQW 409
L F+ PD+F + V + + +++ + ++L PF+LRR+KS+V L K++
Sbjct: 217 LSFIEPDIFPRKQVKEFVEYYQAVEKESEPAKELHNLLQPFLLRRVKSEVTADLPKKVEV 276
Query: 410 VEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQR-QISNYFVQFRKI 468
V Y M Q Y Y+A+ + K DL G ++ + N +Q RK
Sbjct: 277 VLYHGMSALQRK-Y------YKAI----LTK----DLDAFEGGTGRKVMLQNVLIQLRKC 321
Query: 469 ANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFECTLERVIEEL 510
HP L + + F H + A G C L++++ L
Sbjct: 322 VAHPYLFNGVEPEP----FEIGDHIVEASGKLCLLDKLLSFL 359
>MGI|MGI:1915308 [details] [associations]
symbol:Chd1l "chromodomain helicase DNA binding protein
1-like" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=ISO]
[GO:0006974 "response to DNA damage stimulus" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
MGI:MGI:1915308 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000166 GO:GO:0003677 GO:GO:0006281
GO:GO:0006974 GO:GO:0016887 GO:GO:0006338 GO:GO:0004386 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR002589 PROSITE:PS51154 CTD:9557 HOGENOM:HOG000030789
HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV OMA:TCQTIAL ChiTaRS:CHD1L
EMBL:AK014473 EMBL:AK165656 EMBL:BC052385 EMBL:BC057567
EMBL:BC062966 IPI:IPI00466859 IPI:IPI00890897 RefSeq:NP_080815.1
UniGene:Mm.41447 ProteinModelPortal:Q9CXF7 SMR:Q9CXF7
DIP:DIP-58953N STRING:Q9CXF7 PhosphoSite:Q9CXF7 PaxDb:Q9CXF7
PRIDE:Q9CXF7 Ensembl:ENSMUST00000029730 GeneID:68058 KEGG:mmu:68058
UCSC:uc008qow.1 UCSC:uc008qox.1 GeneTree:ENSGT00670000098110
InParanoid:Q9CXF7 NextBio:326336 Bgee:Q9CXF7 Genevestigator:Q9CXF7
Uniprot:Q9CXF7
Length = 900
Score = 379 (138.5 bits), Expect = 5.9e-34, P = 5.9e-34
Identities = 97/263 (36%), Positives = 144/263 (54%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQL GVN+L+ + G IL DEMGLGKT Q I L+ L ND GP L++CP
Sbjct: 40 LRSYQLEGVNWLVQCFHCQ-NGCILGDEMGLGKTCQTIALLIYLVGRLNDEGPFLVLCPL 98
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
SVL NW+ E++++ P S + Y G + ++G F+VLL Y + +
Sbjct: 99 SVLSNWKEEMERFAPGLSCVTYTGDKEERARLQQDLRQESG----FHVLLTTYEICLK-- 152
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
D LK + WS + +DEAH LK+++S + L + A RL+LTGTP+QN L
Sbjct: 153 -----DASFLKSFSWSVLAVDEAHRLKNQSSLLHRTLSEFS--AVFRLLLTGTPIQNSLR 205
Query: 348 ELWSLLEFMMPDLFATEDVD--LKKLLNGE-DRDLIGRMKSILGPFILRRLKSDVMQQLV 404
EL+SLL + PDLF E V+ +++ + E + + +L PF+LRR+K+ V +L
Sbjct: 206 ELYSLLCVVEPDLFCREQVEDFVQRYQDIEKESKSASELHRLLQPFLLRRVKAQVATELP 265
Query: 405 PKIQWVEYVTMERPQEDAYRVAI 427
K + V Y M Q+ Y+ +
Sbjct: 266 KKTEVVVYHGMSALQKKYYKAIL 288
Score = 206 (77.6 bits), Expect = 4.1e-13, P = 4.1e-13
Identities = 61/185 (32%), Positives = 94/185 (50%)
Query: 293 DRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSL 352
D LK + WS + +DEAH LK+++S + L + A RL+LTGTP+QN L EL+SL
Sbjct: 153 DASFLKSFSWSVLAVDEAHRLKNQSSLLHRTLSEFS--AVFRLLLTGTPIQNSLRELYSL 210
Query: 353 LEFMMPDLFATEDVD--LKKLLNGE-DRDLIGRMKSILGPFILRRLKSDVMQQLVPKIQW 409
L + PDLF E V+ +++ + E + + +L PF+LRR+K+ V +L K +
Sbjct: 211 LCVVEPDLFCREQVEDFVQRYQDIEKESKSASELHRLLQPFLLRRVKAQVATELPKKTEV 270
Query: 410 VEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQISNYFVQFRKIA 469
V Y M Q+ Y+ + + D D A + ++ N Q RK
Sbjct: 271 VVYHGMSALQKKYYKAIL-------------MKDLD-AFENETAKKVKLQNILTQLRKCV 316
Query: 470 NHPLL 474
+HP L
Sbjct: 317 DHPYL 321
>WB|WBGene00002637 [details] [associations]
symbol:let-418 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0048557 "embryonic digestive tract
morphogenesis" evidence=IGI] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0008134 "transcription
factor binding" evidence=IPI] [GO:0016581 "NuRD complex"
evidence=ISS] [GO:0040027 "negative regulation of vulval
development" evidence=IMP] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000122 GO:GO:0040035
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
GO:GO:0048557 HSSP:Q14839 EMBL:AF308445 EMBL:FO080294 PIR:T34239
RefSeq:NP_504523.1 UniGene:Cel.16862 ProteinModelPortal:G5EBZ4
SMR:G5EBZ4 IntAct:G5EBZ4 STRING:Q19815 EnsemblMetazoa:F26F12.7
GeneID:178970 KEGG:cel:CELE_F26F12.7 CTD:178970 WormBase:F26F12.7
OMA:VTQDATE NextBio:903342 Uniprot:G5EBZ4
Length = 1829
Score = 383 (139.9 bits), Expect = 7.5e-34, P = 7.5e-34
Identities = 108/322 (33%), Positives = 158/322 (49%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L PYQL G+N+L + G AILADEMGLGKT+Q++T+L L + GP LI P
Sbjct: 602 LHPYQLEGLNWLRHCWSNG-TDAILADEMGLGKTVQSLTFLYSLMKEGHCKGPFLIAAPL 660
Query: 228 SVLENWERELKKWCPSFSVLQYHGA--GRTAY-SRELSSLAKAGLPPP------------ 272
S + NWERE ++WCP F V+ Y G R E S + A P
Sbjct: 661 STIINWEREAEQWCPDFYVVTYVGLRDARVVLREHEFSFVEGAVRSGPKASKMKTTENMK 720
Query: 273 FNVLLVCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNAN 332
F+VLL Y D+ IL W +++DEAH LK+ S +KNL +
Sbjct: 721 FHVLLTSYETINM-------DKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYT--IH 771
Query: 333 QRLMLTGTPLQNDLHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFIL 392
R++LTGTPLQN+L EL+ LL F+ + F + + D I ++ ++LGP +L
Sbjct: 772 YRVLLTGTPLQNNLEELFHLLNFLSKERFNQLEAFTAEFNEISKEDQIEKLHNLLGPHML 831
Query: 393 RRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGV 452
RRLK+DV+ + K + + V + Q+ Y+ ++R + D +
Sbjct: 832 RRLKADVLTGMPSKSELIVRVELSAMQKKWYK------NILTR-------NFDALNVKNG 878
Query: 453 LPQRQISNYFVQFRKIANHPLL 474
Q + N ++ +K NHP L
Sbjct: 879 GTQMSLMNVLMELKKCCNHPYL 900
>UNIPROTKB|G5EBZ4 [details] [associations]
symbol:let-418 "Protein let-418" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000122 GO:GO:0040035
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
GO:GO:0048557 HSSP:Q14839 EMBL:AF308445 EMBL:FO080294 PIR:T34239
RefSeq:NP_504523.1 UniGene:Cel.16862 ProteinModelPortal:G5EBZ4
SMR:G5EBZ4 IntAct:G5EBZ4 STRING:Q19815 EnsemblMetazoa:F26F12.7
GeneID:178970 KEGG:cel:CELE_F26F12.7 CTD:178970 WormBase:F26F12.7
OMA:VTQDATE NextBio:903342 Uniprot:G5EBZ4
Length = 1829
Score = 383 (139.9 bits), Expect = 7.5e-34, P = 7.5e-34
Identities = 108/322 (33%), Positives = 158/322 (49%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L PYQL G+N+L + G AILADEMGLGKT+Q++T+L L + GP LI P
Sbjct: 602 LHPYQLEGLNWLRHCWSNG-TDAILADEMGLGKTVQSLTFLYSLMKEGHCKGPFLIAAPL 660
Query: 228 SVLENWERELKKWCPSFSVLQYHGA--GRTAY-SRELSSLAKAGLPPP------------ 272
S + NWERE ++WCP F V+ Y G R E S + A P
Sbjct: 661 STIINWEREAEQWCPDFYVVTYVGLRDARVVLREHEFSFVEGAVRSGPKASKMKTTENMK 720
Query: 273 FNVLLVCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNAN 332
F+VLL Y D+ IL W +++DEAH LK+ S +KNL +
Sbjct: 721 FHVLLTSYETINM-------DKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYT--IH 771
Query: 333 QRLMLTGTPLQNDLHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFIL 392
R++LTGTPLQN+L EL+ LL F+ + F + + D I ++ ++LGP +L
Sbjct: 772 YRVLLTGTPLQNNLEELFHLLNFLSKERFNQLEAFTAEFNEISKEDQIEKLHNLLGPHML 831
Query: 393 RRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGV 452
RRLK+DV+ + K + + V + Q+ Y+ ++R + D +
Sbjct: 832 RRLKADVLTGMPSKSELIVRVELSAMQKKWYK------NILTR-------NFDALNVKNG 878
Query: 453 LPQRQISNYFVQFRKIANHPLL 474
Q + N ++ +K NHP L
Sbjct: 879 GTQMSLMNVLMELKKCCNHPYL 900
>ZFIN|ZDB-GENE-030131-497 [details] [associations]
symbol:chd9 "chromodomain helicase DNA binding
protein 9" species:7955 "Danio rerio" [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 ZFIN:ZDB-GENE-030131-497
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 GeneTree:ENSGT00560000077077
EMBL:CR318585 EMBL:CU464124 EMBL:FP015866 IPI:IPI00972236
Ensembl:ENSDART00000027807 Bgee:E7F7W5 Uniprot:E7F7W5
Length = 2948
Score = 385 (140.6 bits), Expect = 8.6e-34, P = 8.6e-34
Identities = 114/352 (32%), Positives = 186/352 (52%)
Query: 168 LKPYQLVGVNFLLL-LYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCP 226
L+ YQL GVN+LL Y + ILADEMGLGKTIQ+IT+L + + GP LI+ P
Sbjct: 913 LRDYQLEGVNWLLFNWYNR--RNCILADEMGLGKTIQSITFLEEI-YRTGIKGPFLIIAP 969
Query: 227 ASVLENWERELKKWCPSFSVLQYHGA--GRTA------YSRELSSLAKAGLPPPFNVLLV 278
S + NWERE + W +V+ YHG+ R Y R+ G F ++
Sbjct: 970 LSTIANWEREFRTWT-HLNVIVYHGSVVSRQMLQQYEMYCRDSQGRVIRGAYR-FQAVIT 1027
Query: 279 CYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKN--LMSVARNANQRLM 336
+ + + L W CV++DEAH LK+KN + LMS+ +++
Sbjct: 1028 TFEMILGGCPE-------LNAIDWRCVIIDEAHRLKNKNCKLLEGFKLMSL----EHKVL 1076
Query: 337 LTGTPLQNDLHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFILRRLK 396
LTGTPLQN + EL+SLL F+ P F +E+ +++ + + + + ++++IL P +LRRLK
Sbjct: 1077 LTGTPLQNTVEELFSLLHFLEPTRFPSENTFMQEFGDLKTEEQVQKLQAILKPMMLRRLK 1136
Query: 397 SDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQR 456
DV ++L PK + + V + Q+ YR +E+ + + +AK A A + +L
Sbjct: 1137 EDVEKKLAPKEETIIEVELTNIQKKYYRAILEK----NFSFLAK--GAGQANVPNLL--- 1187
Query: 457 QISNYFVQFRKIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFECTLERVIE 508
N ++ RK NHP L++ +++ ++ K+++ A F L+ +I+
Sbjct: 1188 ---NTMMELRKCCNHPYLIKG--AEEKIMEDFKEVYSPAAVDFH--LQAMIQ 1232
>UNIPROTKB|H3BTW3 [details] [associations]
symbol:CHD9 "Chromodomain-helicase-DNA-binding protein 9"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00384 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 EMBL:AC007906
EMBL:AC079416 HGNC:HGNC:25701 Ensembl:ENST00000565803 Bgee:H3BTW3
Uniprot:H3BTW3
Length = 1099
Score = 379 (138.5 bits), Expect = 8.9e-34, P = 8.9e-34
Identities = 110/329 (33%), Positives = 170/329 (51%)
Query: 159 DEDSDFQP--VLKPYQLVGVNFLLL-LYRKGIAGAILADEMGLGKTIQAITYLMLLKHLN 215
D+ D++ L+ YQL G+N+LL Y + ILADEMGLGKTIQ+IT+L + L
Sbjct: 375 DQSRDYKNGNQLREYQLEGLNWLLFNWYNR--RNCILADEMGLGKTIQSITFLYEIL-LT 431
Query: 216 NDPGPHLIVCPASVLENWERELKKWCPSFSVLQYHGA--GRTA------YSRELSSLAKA 267
GP LI+ P S + NWERE + W +V+ YHG+ R Y R+
Sbjct: 432 GIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYHGSLISRQMIQQYEMYFRDSQGRIIR 490
Query: 268 GLPPPFNVLLVCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSV 327
G F ++ + + + L W CV++DEAH LK+KN + L +
Sbjct: 491 GAYR-FQAIITTFEMILGGCGE-------LNAIEWRCVIIDEAHRLKNKNCKLLEGLKLM 542
Query: 328 ARNANQRLMLTGTPLQNDLHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSIL 387
N +++LTGTPLQN + EL+SLL F+ P F +E +++ + + + + ++++IL
Sbjct: 543 --NLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDLKTEEQVQKLQAIL 600
Query: 388 GPFILRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLA 447
P +LRRLK DV ++L PK + + V + Q+ YR +E+ + LS
Sbjct: 601 KPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEK-------NFSFLSKGAGQ 653
Query: 448 TIVGVLPQRQISNYFVQFRKIANHPLLVR 476
T V P + N ++ RK NHP L++
Sbjct: 654 TNV---PN--LVNTMMELRKCCNHPYLIK 677
>UNIPROTKB|E2QUR1 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 EMBL:AAEX03009852
Ensembl:ENSCAFT00000009072 Uniprot:E2QUR1
Length = 2200
Score = 383 (139.9 bits), Expect = 9.6e-34, P = 9.6e-34
Identities = 107/316 (33%), Positives = 162/316 (51%)
Query: 168 LKPYQLVGVNFLLL-LYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCP 226
L+ YQL GVN+LL Y + ILADEMGLGKTIQ+I +L + ++ GP L++ P
Sbjct: 428 LREYQLEGVNWLLFNWYNR--QNCILADEMGLGKTIQSIAFLQEVYNVGIH-GPFLVIAP 484
Query: 227 ASVLENWERELKKWCPSFSVLQYHG--AGRTAYSR-ELSSLAKAG-LPP---PFNVLLVC 279
S + NWERE W + + YHG A R + E+ G L P F+ L+
Sbjct: 485 LSTITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITT 543
Query: 280 YSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTG 339
+ + D L+ W CV++DEAH LK++N +L + + +++LTG
Sbjct: 544 FEMI-------LSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHM--DLEHKVLLTG 594
Query: 340 TPLQNDLHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFILRRLKSDV 399
TPLQN + EL+SLL F+ P F +E LK + + + + ++++IL P +LRRLK DV
Sbjct: 595 TPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGDLKTEEQVQKLQAILKPMMLRRLKEDV 654
Query: 400 MQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQIS 459
+ L PK + + V + Q+ YR +E+ + LS G +
Sbjct: 655 EKNLAPKQETIIEVELTNIQKKYYRAILEK-------NFSFLSKG-----AGHTNMPNLL 702
Query: 460 NYFVQFRKIANHPLLV 475
N ++ RK NHP L+
Sbjct: 703 NTMMELRKCCNHPYLI 718
>UNIPROTKB|Q9HCK8 [details] [associations]
symbol:CHD8 "Chromodomain-helicase-DNA-binding protein 8"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0070016 "armadillo repeat
domain binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IDA]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003678 "DNA helicase activity" evidence=IMP] [GO:0035064
"methylated histone residue binding" evidence=IDA] [GO:0045945
"positive regulation of transcription from RNA polymerase III
promoter" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IMP] [GO:0043234 "protein complex" evidence=IDA]
[GO:0002039 "p53 binding" evidence=ISS] [GO:0008013 "beta-catenin
binding" evidence=IDA] [GO:0071339 "MLL1 complex" evidence=IDA]
[GO:0042393 "histone binding" evidence=ISS] [GO:0032508 "DNA duplex
unwinding" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00592 Pfam:PF00385
GO:GO:0005524 GO:GO:0045892 GO:GO:0043066 GO:GO:0003677
GO:GO:0001701 GO:GO:0045944 GO:GO:0006351 GO:GO:0035064
GO:GO:0008013 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0043044 GO:GO:0071339 GO:GO:0002039 InterPro:IPR023780
PROSITE:PS00598 GO:GO:0008094 HOVERGEN:HBG107676 EMBL:CR749315
EMBL:AL834524 EMBL:AL135744 EMBL:AL161747 EMBL:CB043942
EMBL:AB046784 EMBL:AK131077 EMBL:BC011695 EMBL:BC025964
EMBL:BC036920 EMBL:BC063693 EMBL:BC073903 EMBL:BC098452
IPI:IPI00398992 IPI:IPI00719073 RefSeq:NP_001164100.1
RefSeq:NP_065971.2 UniGene:Hs.530698 PDB:2CKA PDB:2DL6 PDBsum:2CKA
PDBsum:2DL6 ProteinModelPortal:Q9HCK8 SMR:Q9HCK8 IntAct:Q9HCK8
STRING:Q9HCK8 PhosphoSite:Q9HCK8 DMDM:226706293 PaxDb:Q9HCK8
PRIDE:Q9HCK8 Ensembl:ENST00000399982 Ensembl:ENST00000430710
Ensembl:ENST00000557364 GeneID:57680 KEGG:hsa:57680 UCSC:uc001war.2
UCSC:uc001was.2 CTD:57680 GeneCards:GC14M021853 HGNC:HGNC:20153
HPA:HPA000849 MIM:610528 neXtProt:NX_Q9HCK8 PharmGKB:PA134957052
KO:K04494 OMA:FLAYMED EvolutionaryTrace:Q9HCK8 GenomeRNAi:57680
NextBio:64494 ArrayExpress:Q9HCK8 Bgee:Q9HCK8 CleanEx:HS_CHD8
Genevestigator:Q9HCK8 GermOnline:ENSG00000100888 Uniprot:Q9HCK8
Length = 2581
Score = 383 (139.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 107/316 (33%), Positives = 162/316 (51%)
Query: 168 LKPYQLVGVNFLLL-LYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCP 226
L+ YQL GVN+LL Y + ILADEMGLGKTIQ+I +L + ++ GP L++ P
Sbjct: 811 LREYQLEGVNWLLFNWYNR--QNCILADEMGLGKTIQSIAFLQEVYNVGIH-GPFLVIAP 867
Query: 227 ASVLENWERELKKWCPSFSVLQYHG--AGRTAYSR-ELSSLAKAG-LPP---PFNVLLVC 279
S + NWERE W + + YHG A R + E+ G L P F+ L+
Sbjct: 868 LSTITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITT 926
Query: 280 YSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTG 339
+ + D L+ W CV++DEAH LK++N +L + + +++LTG
Sbjct: 927 FEMI-------LSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHM--DLEHKVLLTG 977
Query: 340 TPLQNDLHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFILRRLKSDV 399
TPLQN + EL+SLL F+ P F +E LK + + + + ++++IL P +LRRLK DV
Sbjct: 978 TPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGDLKTEEQVQKLQAILKPMMLRRLKEDV 1037
Query: 400 MQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQIS 459
+ L PK + + V + Q+ YR +E+ + LS G +
Sbjct: 1038 EKNLAPKQETIIEVELTNIQKKYYRAILEK-------NFSFLSKG-----AGHTNMPNLL 1085
Query: 460 NYFVQFRKIANHPLLV 475
N ++ RK NHP L+
Sbjct: 1086 NTMMELRKCCNHPYLI 1101
>RGD|620696 [details] [associations]
symbol:Chd8 "chromodomain helicase DNA binding protein 8"
species:10116 "Rattus norvegicus" [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0002039 "p53 binding"
evidence=ISO;ISS] [GO:0003677 "DNA binding" evidence=ISO;ISS]
[GO:0003678 "DNA helicase activity" evidence=ISO;ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO;IDA] [GO:0008094
"DNA-dependent ATPase activity" evidence=ISO;ISS] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISO;IDA] [GO:0032508 "DNA duplex unwinding" evidence=ISO]
[GO:0035064 "methylated histone residue binding" evidence=ISO;ISS]
[GO:0042393 "histone binding" evidence=ISO;ISS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISO;ISS] [GO:0043066
"negative regulation of apoptotic process" evidence=ISO;ISS]
[GO:0043234 "protein complex" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO;ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;ISS] [GO:0045945 "positive regulation of
transcription from RNA polymerase III promoter" evidence=ISO;ISS]
[GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=ISO;IDA] [GO:0070016 "armadillo repeat domain binding"
evidence=IPI] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 RGD:620696 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0006351 GO:GO:0035064 GO:GO:0008013
GO:GO:0045945 GO:GO:0030178 GO:GO:0060070 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
GO:GO:0002039 EMBL:CH474040 InterPro:IPR023780 PROSITE:PS00598
GO:GO:0008094 HOGENOM:HOG000246942 GeneTree:ENSGT00560000077077
HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC CTD:57680 KO:K04494
EMBL:AF169825 IPI:IPI00201110 IPI:IPI00923717 RefSeq:NP_075222.2
UniGene:Rn.98337 STRING:Q9JIX5 PhosphoSite:Q9JIX5 PRIDE:Q9JIX5
Ensembl:ENSRNOT00000022593 GeneID:65027 KEGG:rno:65027
UCSC:RGD:620696 NextBio:613802 Genevestigator:Q9JIX5 Uniprot:Q9JIX5
Length = 2581
Score = 383 (139.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 107/316 (33%), Positives = 162/316 (51%)
Query: 168 LKPYQLVGVNFLLL-LYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCP 226
L+ YQL GVN+LL Y + ILADEMGLGKTIQ+I +L + ++ GP L++ P
Sbjct: 811 LREYQLEGVNWLLFNWYNR--QNCILADEMGLGKTIQSIAFLQEVYNVGIH-GPFLVIAP 867
Query: 227 ASVLENWERELKKWCPSFSVLQYHG--AGRTAYSR-ELSSLAKAG-LPP---PFNVLLVC 279
S + NWERE W + + YHG A R + E+ G L P F+ L+
Sbjct: 868 LSTITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITT 926
Query: 280 YSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTG 339
+ + D L+ W CV++DEAH LK++N +L + + +++LTG
Sbjct: 927 FEMI-------LSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHM--DLEHKVLLTG 977
Query: 340 TPLQNDLHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFILRRLKSDV 399
TPLQN + EL+SLL F+ P F +E LK + + + + ++++IL P +LRRLK DV
Sbjct: 978 TPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGDLKTEEQVQKLQAILKPMMLRRLKEDV 1037
Query: 400 MQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQIS 459
+ L PK + + V + Q+ YR +E+ + LS G +
Sbjct: 1038 EKNLAPKQETIIEVELTNIQKKYYRAILEK-------NFSFLSKG-----AGHTNMPNLL 1085
Query: 460 NYFVQFRKIANHPLLV 475
N ++ RK NHP L+
Sbjct: 1086 NTMMELRKCCNHPYLI 1101
>MGI|MGI:1915022 [details] [associations]
symbol:Chd8 "chromodomain helicase DNA binding protein 8"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0002039 "p53 binding" evidence=IPI] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=ISO;IDA] [GO:0003678 "DNA helicase activity" evidence=ISO]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=ISO] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISO] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=ISO] [GO:0032508 "DNA duplex unwinding"
evidence=ISO] [GO:0035064 "methylated histone residue binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IMP;IDA] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0045945 "positive regulation of transcription
from RNA polymerase III promoter" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0070016 "armadillo repeat domain binding" evidence=ISO]
[GO:0071339 "MLL1 complex" evidence=ISO] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 MGI:MGI:1915022 Pfam:PF00385 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0006351 GO:GO:0035064 GO:GO:0008013
GO:GO:0045945 GO:GO:0030178 GO:GO:0060070 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
InterPro:IPR023780 PROSITE:PS00598 GO:GO:0008094
HOGENOM:HOG000246942 GeneTree:ENSGT00560000077077
HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC CTD:57680 KO:K04494
OMA:FLAYMED EMBL:DQ190419 EMBL:AY863219 EMBL:AK129393 EMBL:AK160299
IPI:IPI00858099 IPI:IPI00923681 RefSeq:NP_963999.2
UniGene:Mm.289934 ProteinModelPortal:Q09XV5 SMR:Q09XV5
IntAct:Q09XV5 STRING:Q09XV5 PhosphoSite:Q09XV5 PaxDb:Q09XV5
PRIDE:Q09XV5 Ensembl:ENSMUST00000089752 GeneID:67772 KEGG:mmu:67772
UCSC:uc007tot.1 UCSC:uc007tov.1 InParanoid:Q09XV5 ChiTaRS:CHD8
NextBio:325525 Bgee:Q09XV5 Genevestigator:Q09XV5 Uniprot:Q09XV5
Length = 2582
Score = 383 (139.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 107/316 (33%), Positives = 162/316 (51%)
Query: 168 LKPYQLVGVNFLLL-LYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCP 226
L+ YQL GVN+LL Y + ILADEMGLGKTIQ+I +L + ++ GP L++ P
Sbjct: 813 LREYQLEGVNWLLFNWYNR--QNCILADEMGLGKTIQSIAFLQEVYNVGIH-GPFLVIAP 869
Query: 227 ASVLENWERELKKWCPSFSVLQYHG--AGRTAYSR-ELSSLAKAG-LPP---PFNVLLVC 279
S + NWERE W + + YHG A R + E+ G L P F+ L+
Sbjct: 870 LSTITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITT 928
Query: 280 YSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTG 339
+ + D L+ W CV++DEAH LK++N +L + + +++LTG
Sbjct: 929 FEMI-------LSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHM--DLEHKVLLTG 979
Query: 340 TPLQNDLHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFILRRLKSDV 399
TPLQN + EL+SLL F+ P F +E LK + + + + ++++IL P +LRRLK DV
Sbjct: 980 TPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGDLKTEEQVQKLQAILKPMMLRRLKEDV 1039
Query: 400 MQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQIS 459
+ L PK + + V + Q+ YR +E+ + LS G +
Sbjct: 1040 EKNLAPKQETIIEVELTNIQKKYYRAILEK-------NFSFLSKG-----AGHTNMPNLL 1087
Query: 460 NYFVQFRKIANHPLLV 475
N ++ RK NHP L+
Sbjct: 1088 NTMMELRKCCNHPYLI 1103
>UNIPROTKB|B5DE69 [details] [associations]
symbol:chd8 "Chromodomain-helicase-DNA-binding protein 8"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0016055 GO:GO:0003677 GO:GO:0006351
GO:GO:0016568 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071339
InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG107676 CTD:57680
KO:K04494 EMBL:BC168549 RefSeq:NP_001131089.2 UniGene:Str.42730
GeneID:100192376 KEGG:xtr:100192376 Xenbase:XB-GENE-966847
Uniprot:B5DE69
Length = 2184
Score = 382 (139.5 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 108/316 (34%), Positives = 168/316 (53%)
Query: 168 LKPYQLVGVNFLLL-LYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCP 226
L+ YQL GVN+LL Y + ILADEMGLGKTIQ+IT+L + ++ GP L++ P
Sbjct: 755 LREYQLEGVNWLLFNWYNR--QNCILADEMGLGKTIQSITFLQEVYNVGIR-GPFLVIAP 811
Query: 227 ASVLENWERELKKWCPSFSVLQYHG--AGRTAYSR-ELSSL-AKAGLPP---PFNVLLVC 279
S + NWERE W + + YHG A R + E+ +K L P F+ L+
Sbjct: 812 LSTITNWEREFGSWT-QMNTIVYHGSLASRQMIQQYEMYCKDSKGRLIPGAYKFDALITT 870
Query: 280 YSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTG 339
+ + D L+ W CV++DEAH LK++N +L + + +++LTG
Sbjct: 871 FEMV-------LSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHM--DLEHKVLLTG 921
Query: 340 TPLQNDLHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFILRRLKSDV 399
TPLQN + EL+SLL F+ P F++E LK + + + + ++++IL P +LRRLK DV
Sbjct: 922 TPLQNTVEELFSLLHFLEPTQFSSEAEFLKDFGDLKTEEQVQKLQAILKPMMLRRLKEDV 981
Query: 400 MQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQIS 459
+ L PK + + V + Q+ YR +E+ + + + K A + +L
Sbjct: 982 EKNLAPKQETIIEVELTNIQKKYYRAILEK----NFSFLTK--GASQSNTPNLL------ 1029
Query: 460 NYFVQFRKIANHPLLV 475
N ++ RK NHP L+
Sbjct: 1030 NTMMELRKCCNHPYLI 1045
>POMBASE|SPAC3G6.01 [details] [associations]
symbol:hrp3 "ATP-dependent DNA helicase Hrp3"
species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0000790 "nuclear
chromatin" evidence=NAS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IC] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=NAS] [GO:0008094
"DNA-dependent ATPase activity" evidence=ISM] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IMP]
[GO:0031934 "mating-type region heterochromatin" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEP] [GO:0060303 "regulation of
nucleosome density" evidence=IMP] [GO:0030702 "chromatin silencing
at centromere" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
PomBase:SPAC3G6.01 Pfam:PF00385 GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0045944 GO:GO:0006351
GO:GO:0006338 GO:GO:0030466 GO:GO:0000790 GO:GO:0000070
GO:GO:0004003 GO:GO:0031934 InterPro:IPR016197 SUPFAM:SSF54160
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 KO:K11367 HOGENOM:HOG000207917
OrthoDB:EOG4TF3TB GO:GO:0060303 PIR:T38720 RefSeq:NP_594967.1
ProteinModelPortal:O14139 MINT:MINT-4670837 STRING:O14139
EnsemblFungi:SPAC3G6.01.1 GeneID:2543064 KEGG:spo:SPAC3G6.01
OMA:HINGSST NextBio:20804092 Uniprot:O14139
Length = 1388
Score = 376 (137.4 bits), Expect = 2.8e-33, P = 2.8e-33
Identities = 104/310 (33%), Positives = 160/310 (51%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ +QL GVN++ L+ K G ILADEMGLGKT+Q + +L L H GP L+V P
Sbjct: 375 LRDFQLTGVNWMAYLWHKNENG-ILADEMGLGKTVQTVAFLSYLAHSLRQHGPFLVVVPL 433
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYS-RELSSLAKAGLPPPFNVLLVCYSLFERH 286
S + W+ L W + + Y G + R+ FN+LL Y +
Sbjct: 434 STVPAWQETLALWASDMNCISYLGNTTSRQVIRDYEFYVDGTQKIKFNLLLTTYEYVLK- 492
Query: 287 SVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDL 346
DR +L +W + +DEAH LK+ S ++ L S +N+N RL++TGTPLQN++
Sbjct: 493 ------DRSVLSNIKWQYMAIDEAHRLKNSESSLYEAL-SQFKNSN-RLLITGTPLQNNI 544
Query: 347 HELWSLLEFMMPDLFAT-EDVDLKKLLNGEDRDLIGRMKSILGPFILRRLKSDVMQQLVP 405
EL +L++F+MP F E+++L+ + E I ++ L P+ILRRLK DV + L
Sbjct: 545 RELAALVDFLMPGKFEIREEINLEAP-DEEQEAYIRSLQEHLQPYILRRLKKDVEKSLPS 603
Query: 406 KIQWVEYVTMERPQEDAYR-VAIEEYRAVSRARIAKLSDADLATIVGVLPQRQISNYFVQ 464
K + + V + Q Y+ + YR ++++ I+ S L IV V+
Sbjct: 604 KSERILRVELSDLQMYWYKNILTRNYRVLTQS-ISSGSQISLLNIV------------VE 650
Query: 465 FRKIANHPLL 474
+K +NHP L
Sbjct: 651 LKKASNHPYL 660
>UNIPROTKB|E1BS48 [details] [associations]
symbol:CHD9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:MWGHQTA EMBL:AADN02038292
EMBL:AADN02038293 EMBL:AADN02038294 EMBL:AADN02038295
EMBL:AADN02038296 EMBL:AADN02038297 EMBL:AADN02038298
IPI:IPI00579055 Ensembl:ENSGALT00000005902 Uniprot:E1BS48
Length = 2614
Score = 379 (138.5 bits), Expect = 3.2e-33, P = 3.2e-33
Identities = 106/318 (33%), Positives = 168/318 (52%)
Query: 168 LKPYQLVGVNFLLL-LYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCP 226
L+ YQL G+N+LL Y + ILADEMGLGKTIQ+IT+L + L+ GP LI+ P
Sbjct: 857 LREYQLEGLNWLLFNWYNR--RNCILADEMGLGKTIQSITFLYEIL-LSGIRGPFLIIAP 913
Query: 227 ASVLENWERELKKWCPSFSVLQYHGA--GRTA------YSRELSSLAKAGLPPPFNVLLV 278
S + NWERE + W +V+ YHG+ R Y R+ G F ++
Sbjct: 914 LSTITNWEREFRTWT-DLNVVVYHGSMISRQMIQQYEMYFRDSQGRIVRGTYR-FQAIIT 971
Query: 279 CYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLT 338
+ + + L W CV++DEAH LK++N + L + N +++LT
Sbjct: 972 TFEMILGGCPE-------LNAIEWRCVIIDEAHRLKNRNCKLLEGLKLM--NLEHKVLLT 1022
Query: 339 GTPLQNDLHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFILRRLKSD 398
GTPLQN + EL+SLL F+ P F E +++ + + + + ++++IL P +LRRLK D
Sbjct: 1023 GTPLQNTVEELFSLLHFLEPLRFPAESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKED 1082
Query: 399 VMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQI 458
V ++L PK + + V + Q+ YR +E+ + A ++K A A + ++
Sbjct: 1083 VEKKLAPKEETIIEVELTNIQKKYYRAILEK----NFAFLSK--GAGQANVPNLV----- 1131
Query: 459 SNYFVQFRKIANHPLLVR 476
N ++ RK NHP L++
Sbjct: 1132 -NTMMELRKCCNHPYLIK 1148
>UNIPROTKB|Q3L8U1 [details] [associations]
symbol:CHD9 "Chromodomain-helicase-DNA-binding protein 9"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0044255 "cellular lipid metabolic
process" evidence=TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
Reactome:REACT_111217 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005654 GO:GO:0006355 GO:GO:0044281
GO:GO:0003677 GO:GO:0044255 GO:GO:0006351 GO:GO:0016568
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
PROSITE:PS00598 HOVERGEN:HBG081150 EMBL:AY243500 EMBL:DQ333316
EMBL:AY647157 EMBL:AC007906 EMBL:AC079416 EMBL:BC140815
EMBL:AB002306 EMBL:AF150735 EMBL:AK022582 IPI:IPI00383105
IPI:IPI00746795 IPI:IPI00914955 RefSeq:NP_079410.4 UniGene:Hs.59159
UniGene:Hs.622347 ProteinModelPortal:Q3L8U1 SMR:Q3L8U1
IntAct:Q3L8U1 STRING:Q3L8U1 PhosphoSite:Q3L8U1 DMDM:215273951
PaxDb:Q3L8U1 PRIDE:Q3L8U1 Ensembl:ENST00000398510
Ensembl:ENST00000447540 Ensembl:ENST00000564845
Ensembl:ENST00000566029 GeneID:80205 KEGG:hsa:80205 UCSC:uc002egy.3
UCSC:uc002ehb.3 UCSC:uc002ehc.3 CTD:80205 GeneCards:GC16P053041
HGNC:HGNC:25701 neXtProt:NX_Q3L8U1 PharmGKB:PA128394727
InParanoid:Q3L8U1 KO:K14438 OMA:MWGHQTA GenomeRNAi:80205
NextBio:70576 ArrayExpress:Q3L8U1 Bgee:Q3L8U1 CleanEx:HS_CHD9
Genevestigator:Q3L8U1 GermOnline:ENSG00000177200 Uniprot:Q3L8U1
Length = 2897
Score = 379 (138.5 bits), Expect = 3.6e-33, P = 3.6e-33
Identities = 110/329 (33%), Positives = 170/329 (51%)
Query: 159 DEDSDFQP--VLKPYQLVGVNFLLL-LYRKGIAGAILADEMGLGKTIQAITYLMLLKHLN 215
D+ D++ L+ YQL G+N+LL Y + ILADEMGLGKTIQ+IT+L + L
Sbjct: 849 DQSRDYKNGNQLREYQLEGLNWLLFNWYNR--RNCILADEMGLGKTIQSITFLYEIL-LT 905
Query: 216 NDPGPHLIVCPASVLENWERELKKWCPSFSVLQYHGA--GRTA------YSRELSSLAKA 267
GP LI+ P S + NWERE + W +V+ YHG+ R Y R+
Sbjct: 906 GIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYHGSLISRQMIQQYEMYFRDSQGRIIR 964
Query: 268 GLPPPFNVLLVCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSV 327
G F ++ + + + L W CV++DEAH LK+KN + L +
Sbjct: 965 GAYR-FQAIITTFEMILGGCGE-------LNAIEWRCVIIDEAHRLKNKNCKLLEGLKLM 1016
Query: 328 ARNANQRLMLTGTPLQNDLHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSIL 387
N +++LTGTPLQN + EL+SLL F+ P F +E +++ + + + + ++++IL
Sbjct: 1017 --NLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDLKTEEQVQKLQAIL 1074
Query: 388 GPFILRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLA 447
P +LRRLK DV ++L PK + + V + Q+ YR +E+ + LS
Sbjct: 1075 KPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEK-------NFSFLSKGAGQ 1127
Query: 448 TIVGVLPQRQISNYFVQFRKIANHPLLVR 476
T V P + N ++ RK NHP L++
Sbjct: 1128 TNV---PN--LVNTMMELRKCCNHPYLIK 1151
>UNIPROTKB|E1BDZ3 [details] [associations]
symbol:CHD9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:MWGHQTA EMBL:DAAA02046444
IPI:IPI00705152 Ensembl:ENSBTAT00000002955 Uniprot:E1BDZ3
Length = 2900
Score = 379 (138.5 bits), Expect = 3.6e-33, P = 3.6e-33
Identities = 110/329 (33%), Positives = 170/329 (51%)
Query: 159 DEDSDFQP--VLKPYQLVGVNFLLL-LYRKGIAGAILADEMGLGKTIQAITYLMLLKHLN 215
D+ D++ L+ YQL G+N+LL Y + ILADEMGLGKTIQ+IT+L + L
Sbjct: 850 DQSRDYKNGNQLREYQLEGLNWLLFNWYNR--RNCILADEMGLGKTIQSITFLYEIL-LT 906
Query: 216 NDPGPHLIVCPASVLENWERELKKWCPSFSVLQYHGA--GRTA------YSRELSSLAKA 267
GP LI+ P S + NWERE + W +V+ YHG+ R Y R+
Sbjct: 907 GIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYHGSLISRQMIQQYEMYFRDSQGRIIR 965
Query: 268 GLPPPFNVLLVCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSV 327
G F ++ + + + L W CV++DEAH LK+KN + L +
Sbjct: 966 GAYR-FQAIITTFEMILGGCGE-------LNAIEWRCVIIDEAHRLKNKNCKLLEGLKLM 1017
Query: 328 ARNANQRLMLTGTPLQNDLHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSIL 387
N +++LTGTPLQN + EL+SLL F+ P F +E +++ + + + + ++++IL
Sbjct: 1018 --NLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDLKTEEQVQKLQAIL 1075
Query: 388 GPFILRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLA 447
P +LRRLK DV ++L PK + + V + Q+ YR +E+ + LS
Sbjct: 1076 KPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEK-------NFSFLSKGAGQ 1128
Query: 448 TIVGVLPQRQISNYFVQFRKIANHPLLVR 476
T V P + N ++ RK NHP L++
Sbjct: 1129 TNV---PN--LVNTMMELRKCCNHPYLIK 1152
>UNIPROTKB|E2RDK8 [details] [associations]
symbol:CHD9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:MWGHQTA EMBL:AAEX03001603
EMBL:AAEX03001604 EMBL:AAEX03001605 Ensembl:ENSCAFT00000015413
Uniprot:E2RDK8
Length = 2902
Score = 379 (138.5 bits), Expect = 3.6e-33, P = 3.6e-33
Identities = 110/329 (33%), Positives = 170/329 (51%)
Query: 159 DEDSDFQP--VLKPYQLVGVNFLLL-LYRKGIAGAILADEMGLGKTIQAITYLMLLKHLN 215
D+ D++ L+ YQL G+N+LL Y + ILADEMGLGKTIQ+IT+L + L
Sbjct: 851 DQSRDYKNGNQLREYQLEGLNWLLFNWYNR--RNCILADEMGLGKTIQSITFLYEIL-LT 907
Query: 216 NDPGPHLIVCPASVLENWERELKKWCPSFSVLQYHGA--GRTA------YSRELSSLAKA 267
GP LI+ P S + NWERE + W +V+ YHG+ R Y R+
Sbjct: 908 GIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYHGSLISRQMIQQYEMYFRDSQGRIIR 966
Query: 268 GLPPPFNVLLVCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSV 327
G F ++ + + + L W CV++DEAH LK+KN + L +
Sbjct: 967 GAYR-FQAIITTFEMILGGCGE-------LNAIEWRCVIIDEAHRLKNKNCKLLEGLKLM 1018
Query: 328 ARNANQRLMLTGTPLQNDLHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSIL 387
N +++LTGTPLQN + EL+SLL F+ P F +E +++ + + + + ++++IL
Sbjct: 1019 --NLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDLKTEEQVQKLQAIL 1076
Query: 388 GPFILRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLA 447
P +LRRLK DV ++L PK + + V + Q+ YR +E+ + LS
Sbjct: 1077 KPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEK-------NFSFLSKGAGQ 1129
Query: 448 TIVGVLPQRQISNYFVQFRKIANHPLLVR 476
T V P + N ++ RK NHP L++
Sbjct: 1130 TNV---PN--LVNTMMELRKCCNHPYLIK 1153
>SGD|S000001934 [details] [associations]
symbol:IRC5 "Putative ATPase containing the DEAD/H
helicase-related sequence motif" species:4932 "Saccharomyces
cerevisiae" [GO:0006312 "mitotic recombination" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SGD:S000001934 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 EMBL:D50617 EMBL:BK006940 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006312 GeneTree:ENSGT00550000075106 PIR:S56293
RefSeq:NP_116696.2 ProteinModelPortal:P43610 SMR:P43610
DIP:DIP-5300N MINT:MINT-543614 STRING:P43610 PaxDb:P43610
PRIDE:P43610 EnsemblFungi:YFR038W GeneID:850599 KEGG:sce:YFR038W
CYGD:YFR038w OMA:FEIFNKW OrthoDB:EOG40S3Q6 NextBio:966463
Genevestigator:P43610 GermOnline:YFR038W Uniprot:P43610
Length = 853
Score = 371 (135.7 bits), Expect = 3.8e-33, P = 3.8e-33
Identities = 89/239 (37%), Positives = 131/239 (54%)
Query: 167 VLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCP 226
+LKPYQL G+N+L+ LY G+ G ILADEMGLGKT+Q+I L + ++ GP L+ P
Sbjct: 221 ILKPYQLEGLNWLITLYENGLNG-ILADEMGLGKTVQSIALLAFIYEMDTK-GPFLVTAP 278
Query: 227 ASVLENWERELKKWCPSFSVLQYHGA-GRTAYSRELSSLAKAGLPPPFNVLLVCYSLFER 285
S L+NW E K+ P VL+Y+G G S +L + K +++ Y + R
Sbjct: 279 LSTLDNWMNEFAKFAPDLPVLKYYGTNGYKERSAKLKNFFKQH--GGTGIVITSYEIILR 336
Query: 286 HSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
D ++ W +++DE H LK+ N K L + N + RL+LTGTPLQN+
Sbjct: 337 -------DTDLIMSQNWKFLIVDEGHRLKNINCRLIKELKKI--NTSNRLLLTGTPLQNN 387
Query: 346 LHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDL-IGRMKSILGPFILRRLKSDVMQQL 403
L ELWSLL F+MPD+FA ++ K + + +L G L I L+ +++ L
Sbjct: 388 LAELWSLLNFIMPDIFADFEI-FNKWFDFDSLNLGSGSNSEALNKLINDELQKNLISNL 445
>SGD|S000000966 [details] [associations]
symbol:CHD1 "Chromatin remodeler that regulates various
aspects of transcription" species:4932 "Saccharomyces cerevisiae"
[GO:0030874 "nucleolar chromatin" evidence=IDA] [GO:0042766
"nucleosome mobilization" evidence=IDA] [GO:0000182 "rDNA binding"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0046695 "SLIK (SAGA-like)
complex" evidence=IDA] [GO:0000124 "SAGA complex" evidence=IDA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IGI;IMP] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IDA] [GO:0001178 "regulation of transcriptional start site
selection at RNA polymerase II promoter" evidence=IGI] [GO:2000616
"negative regulation of histone H3-K9 acetylation" evidence=IMP]
[GO:0071441 "negative regulation of histone H3-K14 acetylation"
evidence=IMP] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IGI;IPI] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0031490 "chromatin DNA binding"
evidence=IDA] [GO:0016584 "nucleosome positioning"
evidence=IGI;IDA] [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0006369 "termination of RNA polymerase II transcription"
evidence=IGI;IMP] [GO:0071894 "histone H2B conserved C-terminal
lysine ubiquitination" evidence=IMP] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0035064 "methylated histone residue binding" evidence=IDA]
[GO:2000104 "negative regulation of DNA-dependent DNA replication"
evidence=IGI] [GO:0006363 "termination of RNA polymerase I
transcription" evidence=IGI] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SGD:S000000966 Pfam:PF00385 GO:GO:0005739
GO:GO:0005524 GO:GO:2000104 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:BK006939 GO:GO:0000124 GO:GO:0046695 GO:GO:0004386
GO:GO:0034401 GO:GO:0006368 GO:GO:0035064 GO:GO:0031490
GO:GO:0042766 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
GO:GO:0016584 EMBL:U18917 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 GO:GO:0006363 GO:GO:0008094 GO:GO:0006369
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
KO:K11367 HOGENOM:HOG000207917 PIR:S30818 RefSeq:NP_011091.1
PDB:2DY7 PDB:2DY8 PDB:2H1E PDB:2XB0 PDB:3MWY PDB:3TED PDBsum:2DY7
PDBsum:2DY8 PDBsum:2H1E PDBsum:2XB0 PDBsum:3MWY PDBsum:3TED
ProteinModelPortal:P32657 SMR:P32657 DIP:DIP-6362N IntAct:P32657
MINT:MINT-618890 STRING:P32657 PaxDb:P32657 PeptideAtlas:P32657
EnsemblFungi:YER164W GeneID:856911 KEGG:sce:YER164W CYGD:YER164w
OMA:IKWQFMA OrthoDB:EOG4TF3TB SABIO-RK:P32657
EvolutionaryTrace:P32657 NextBio:983353 Genevestigator:P32657
GermOnline:YER164W GO:GO:0030874 GO:GO:0000182 GO:GO:0071441
GO:GO:2000616 GO:GO:0001178 Uniprot:P32657
Length = 1468
Score = 374 (136.7 bits), Expect = 5.0e-33, P = 5.0e-33
Identities = 101/301 (33%), Positives = 158/301 (52%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ +QL G+N++ L+ KG G ILADEMGLGKT+Q + ++ L GPH+IV P
Sbjct: 376 LRDFQLTGINWMAFLWSKGDNG-ILADEMGLGKTVQTVAFISWLIFARRQNGPHIIVVPL 434
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTA-----YSRELSSLAKAGLPPPFNVLLVCYSL 282
S + W +KW P + + Y G ++ Y + AK FNVLL Y
Sbjct: 435 STMPAWLDTFEKWAPDLNCICYMGNQKSRDTIREYEFYTNPRAKGKKTMKFNVLLTTYEY 494
Query: 283 FERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPL 342
+ DR L +W + +DEAH LK+ S +++L S + AN R+++TGTPL
Sbjct: 495 ILK-------DRAELGSIKWQFMAVDEAHRLKNAESSLYESLNSF-KVAN-RMLITGTPL 545
Query: 343 QNDLHELWSLLEFMMPDLFATE-DVDLKKLLNGEDRDLIGRMKSILGPFILRRLKSDVMQ 401
QN++ EL +L+ F+MP F + ++D + + E + I + + PFILRRLK DV +
Sbjct: 546 QNNIKELAALVNFLMPGRFTIDQEIDFENQ-DEEQEEYIHDLHRRIQPFILRRLKKDVEK 604
Query: 402 QLVPKIQWVEYVTMERPQEDAYR-VAIEEYRAVSRARIAKLSDADLATIVGVLPQRQISN 460
L K + + V + Q + Y+ + + Y A++ AK L I+ L ++ SN
Sbjct: 605 SLPSKTERILRVELSDVQTEYYKNILTKNYSALTAG--AKGGHFSLLNIMNEL--KKASN 660
Query: 461 Y 461
+
Sbjct: 661 H 661
Score = 199 (75.1 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 60/184 (32%), Positives = 97/184 (52%)
Query: 293 DRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSL 352
DR L +W + +DEAH LK+ S +++L S + AN R+++TGTPLQN++ EL +L
Sbjct: 498 DRAELGSIKWQFMAVDEAHRLKNAESSLYESLNSF-KVAN-RMLITGTPLQNNIKELAAL 555
Query: 353 LEFMMPDLFATE-DVDLKKLLNGEDRDLIGRMKSILGPFILRRLKSDVMQQLVPKIQWVE 411
+ F+MP F + ++D + + E + I + + PFILRRLK DV + L K + +
Sbjct: 556 VNFLMPGRFTIDQEIDFENQ-DEEQEEYIHDLHRRIQPFILRRLKKDVEKSLPSKTERIL 614
Query: 412 YVTMERPQEDAYR-VAIEEYRAVSRARIAKLSDADLATIVGVLPQRQISNYFVQFRKIAN 470
V + Q + Y+ + + Y A++ AK L I+ L +K +N
Sbjct: 615 RVELSDVQTEYYKNILTKNYSALTAG--AKGGHFSLLNIMNEL------------KKASN 660
Query: 471 HPLL 474
HP L
Sbjct: 661 HPYL 664
>DICTYBASE|DDB_G0293012 [details] [associations]
symbol:DDB_G0293012 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] InterPro:IPR000330 InterPro:IPR000626
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00213 SMART:SM00298
SMART:SM00490 dictyBase:DDB_G0293012 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0006357 GO:GO:0004003
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
EMBL:AAFI02000199 InterPro:IPR022617 Pfam:PF11976
RefSeq:XP_629261.1 ProteinModelPortal:Q54CF8
EnsemblProtists:DDB0220643 GeneID:8628981 KEGG:ddi:DDB_G0293012
InParanoid:Q54CF8 OMA:IMINEDI Uniprot:Q54CF8
Length = 3071
Score = 367 (134.2 bits), Expect = 5.7e-33, Sum P(2) = 5.7e-33
Identities = 100/310 (32%), Positives = 151/310 (48%)
Query: 168 LKPYQLVGVNFLLLLYR-KGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCP 226
LK +Q+ G FL L Y ++LADEMGLGKTIQ+I +L L GP L+V P
Sbjct: 898 LKEFQVEG--FLWLSYCWYHCRSSLLADEMGLGKTIQSIAFLQYLSQSVGIKGPFLVVAP 955
Query: 227 ASVLENWERELKKWCPSFSVLQYHGAGRT-AYSRELSSLAKAGLPPPFNVLLVCYSLFER 285
S L NW +E+ KW L ++G+ T + + K F VLL Y
Sbjct: 956 LSTLGNWHKEILKWT-KMKTLVFYGSQETRGFISKYEFKHKDTYL--FEVLLTTYETI-- 1010
Query: 286 HSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
D R W +++DE H +K+ S L S+ ++LTGTPLQND
Sbjct: 1011 -----MSDHSSFVRVPWRALILDEGHRIKNDKSKVLSKLKSI--KTEHSIILTGTPLQND 1063
Query: 346 LHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFILRRLKSDVMQQLVP 405
+ ELW++L F+ PD F + L + + ++ + ++ +L P++LRR+K DV +
Sbjct: 1064 MKELWTMLNFLDPDKFNSCQEFLDEYSDLKEESQVSKLHQLLSPYLLRRMKEDVELSIPI 1123
Query: 406 KIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQISNYFVQF 465
K + V V + Q+ YR +E R I + ++ LP+ +SN +Q
Sbjct: 1124 KEETVIQVELSSTQKTYYRAILERNREFLSRGIKQKTN---------LPK--LSNIMIQI 1172
Query: 466 RKIANHPLLV 475
RK+ NHP L+
Sbjct: 1173 RKVCNHPFLI 1182
Score = 44 (20.5 bits), Expect = 5.7e-33, Sum P(2) = 5.7e-33
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 139 EVEASSVRIVTQSDIDDACGDEDSD 163
++ +VR V +SD D + GD +D
Sbjct: 231 DIYIENVRDVIKSDDDQSFGDSSAD 255
>CGD|CAL0005444 [details] [associations]
symbol:SNF2 species:5476 "Candida albicans" [GO:0016514
"SWI/SNF complex" evidence=IPI] [GO:0009405 "pathogenesis"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0001102 "RNA polymerase II activating
transcription factor binding" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IEA] [GO:0031492 "nucleosomal DNA
binding" evidence=IEA] [GO:0016586 "RSC complex" evidence=IEA]
[GO:0044182 "filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:1900430 "positive regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:0036178 "filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:1900442 "positive regulation of filamentous growth of a
population of unicellular organisms in response to neutral pH"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:1900445 "positive regulation of filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0042766 "nucleosome mobilization" evidence=IEA]
[GO:0005987 "sucrose catabolic process" evidence=IEA] [GO:1900231
"regulation of single-species biofilm formation on inanimate
substrate" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0042148 "strand invasion"
evidence=IEA] [GO:0044109 "cellular alcohol catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0031496 "positive regulation of mating type
switching" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0006261 "DNA-dependent DNA
replication" evidence=IEA] [GO:0061412 "positive regulation of
transcription from RNA polymerase II promoter in response to amino
acid starvation" evidence=IEA] [GO:0036244 "cellular response to
neutral pH" evidence=IMP] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 CGD:CAL0005444 GO:GO:0005524 GO:GO:0071216
GO:GO:0036244 GO:GO:0036180 GO:GO:0036178 GO:GO:0009405
GO:GO:1900445 GO:GO:1900442 GO:GO:0006355 GO:GO:0003677
GO:GO:0016514 GO:GO:0004386 EMBL:AACQ01000007 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 KO:K11786
RefSeq:XP_722570.1 ProteinModelPortal:Q5AM49 MINT:MINT-2832160
STRING:Q5AM49 GeneID:3635855 KEGG:cal:CaO19.1526 Uniprot:Q5AM49
Length = 1690
Score = 374 (136.7 bits), Expect = 6.1e-33, P = 6.1e-33
Identities = 111/329 (33%), Positives = 171/329 (51%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
LK YQL G+ +++ L+ + G ILADEMGLGKTIQ I+ L L + PGP L++ P
Sbjct: 781 LKEYQLKGLQWMVSLFNNHLNG-ILADEMGLGKTIQTISLLTYLVEVKKIPGPFLVIVPL 839
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSL-AKAGLPPPFNVLLVCYSLFERH 286
S + NW E +KW PS + Y G T R++ + G N LV + FE +
Sbjct: 840 STVTNWNLEFEKWAPSIKKITYKG---TPNQRKVMQHDIRTG-----NFQLVL-TTFE-Y 889
Query: 287 SVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDL 346
++ D+ +L R +W +++DE H +K+ NS + ++ +++ RL+LTGTPLQN+L
Sbjct: 890 VIK---DKGLLGRIKWVHMIIDEGHRMKNANS-KLSETLTQNYHSDYRLILTGTPLQNNL 945
Query: 347 HELWSLLEFMMPDLF-ATEDVDL---KKLLN--GEDR-DL--------IGRMKSILGPFI 391
ELW+LL F++P +F + + D N G+D+ +L I R+ +L PF+
Sbjct: 946 PELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIELTEEETLLVIRRLHKVLRPFL 1005
Query: 392 LRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVG 451
LRRLK DV + L K++ V Q Y+ + R L D A G
Sbjct: 1006 LRRLKKDVEKDLPNKVEKVVKCKSSALQSKLYQQML---------RYNMLYAGDPAN--G 1054
Query: 452 VLPQ--RQISNYFVQFRKIANHPLLVRRI 478
+P + +N +Q +KI NHP + +
Sbjct: 1055 SVPVTIKNANNQIMQLKKICNHPFVYEEV 1083
>UNIPROTKB|Q5AM49 [details] [associations]
symbol:SNF2 "Putative uncharacterized protein SNF2"
species:237561 "Candida albicans SC5314" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016514 "SWI/SNF complex"
evidence=IPI] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0036178 "filamentous growth of a population of unicellular
organisms in response to neutral pH" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:0036244 "cellular
response to neutral pH" evidence=IMP] [GO:0044182 "filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0071216 "cellular response to biotic stimulus" evidence=IMP]
[GO:1900430 "positive regulation of filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:1900442
"positive regulation of filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:1900445 "positive regulation of filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 CGD:CAL0005444 GO:GO:0005524 GO:GO:0071216
GO:GO:0036244 GO:GO:0036180 GO:GO:0036178 GO:GO:0009405
GO:GO:1900445 GO:GO:1900442 GO:GO:0006355 GO:GO:0003677
GO:GO:0016514 GO:GO:0004386 EMBL:AACQ01000007 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 KO:K11786
RefSeq:XP_722570.1 ProteinModelPortal:Q5AM49 MINT:MINT-2832160
STRING:Q5AM49 GeneID:3635855 KEGG:cal:CaO19.1526 Uniprot:Q5AM49
Length = 1690
Score = 374 (136.7 bits), Expect = 6.1e-33, P = 6.1e-33
Identities = 111/329 (33%), Positives = 171/329 (51%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
LK YQL G+ +++ L+ + G ILADEMGLGKTIQ I+ L L + PGP L++ P
Sbjct: 781 LKEYQLKGLQWMVSLFNNHLNG-ILADEMGLGKTIQTISLLTYLVEVKKIPGPFLVIVPL 839
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSL-AKAGLPPPFNVLLVCYSLFERH 286
S + NW E +KW PS + Y G T R++ + G N LV + FE +
Sbjct: 840 STVTNWNLEFEKWAPSIKKITYKG---TPNQRKVMQHDIRTG-----NFQLVL-TTFE-Y 889
Query: 287 SVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDL 346
++ D+ +L R +W +++DE H +K+ NS + ++ +++ RL+LTGTPLQN+L
Sbjct: 890 VIK---DKGLLGRIKWVHMIIDEGHRMKNANS-KLSETLTQNYHSDYRLILTGTPLQNNL 945
Query: 347 HELWSLLEFMMPDLF-ATEDVDL---KKLLN--GEDR-DL--------IGRMKSILGPFI 391
ELW+LL F++P +F + + D N G+D+ +L I R+ +L PF+
Sbjct: 946 PELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIELTEEETLLVIRRLHKVLRPFL 1005
Query: 392 LRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVG 451
LRRLK DV + L K++ V Q Y+ + R L D A G
Sbjct: 1006 LRRLKKDVEKDLPNKVEKVVKCKSSALQSKLYQQML---------RYNMLYAGDPAN--G 1054
Query: 452 VLPQ--RQISNYFVQFRKIANHPLLVRRI 478
+P + +N +Q +KI NHP + +
Sbjct: 1055 SVPVTIKNANNQIMQLKKICNHPFVYEEV 1083
>CGD|CAL0003962 [details] [associations]
symbol:orf19.239 species:5476 "Candida albicans" [GO:0016586
"RSC complex" evidence=IEA] [GO:0007059 "chromosome segregation"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0031055 "chromatin remodeling at
centromere" evidence=IEA] [GO:0006337 "nucleosome disassembly"
evidence=IEA] [GO:0016584 "nucleosome positioning" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0006368
"transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0007126 "meiosis" evidence=IEA] [GO:0007010
"cytoskeleton organization" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0000086
"G2/M transition of mitotic cell cycle" evidence=IEA] [GO:0015616
"DNA translocase activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 CGD:CAL0003962 GO:GO:0005524 GO:GO:0003677
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
EMBL:AACQ01000027 EMBL:AACQ01000026 InterPro:IPR014012
PROSITE:PS51204 KO:K11786 RefSeq:XP_719938.1 RefSeq:XP_720068.1
ProteinModelPortal:Q5AEM9 STRING:Q5AEM9 GeneID:3638290
GeneID:3638351 KEGG:cal:CaO19.239 KEGG:cal:CaO19.7869
Uniprot:Q5AEM9
Length = 1303
Score = 372 (136.0 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 115/359 (32%), Positives = 180/359 (50%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
LK YQ+ G+ +++ LY + G ILADEMGLGKTIQ+I+ + L ++ LI+ P
Sbjct: 501 LKEYQMKGLEWMVSLYNNHLNG-ILADEMGLGKTIQSISLVTYLIEKKHE-NKFLIIVPL 558
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
S + NW E +KW PS V+ Y G+ + R L + G F VLL Y R
Sbjct: 559 STITNWTLEFEKWAPSIKVIVYKGSQQQR--RSLQPDIRYG---NFQVLLTTYEYVIR-- 611
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
+R +L ++ +S +++DE H +K+ S + L + + N RL+LTGTPLQN+L
Sbjct: 612 -----ERPMLAKFHYSHMIIDEGHRMKNAQSKLSQTLRTYYKTKN-RLILTGTPLQNNLP 665
Query: 348 ELWSLLEFMMPDLF-ATEDVD------------LKKLLNGEDRDL--IGRMKSILGPFIL 392
ELW+LL F++P +F + + D +K+ E+ L I R+ +L PF+L
Sbjct: 666 ELWALLNFVLPGIFNSVKSFDDWFNTPFANTGAQEKIELTEEESLLVIRRLHKVLRPFLL 725
Query: 393 RRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGV 452
RRLK DV + L K++ V + Q Y+ ++ A + G+
Sbjct: 726 RRLKKDVEKDLPDKVEKVLKCNLSGLQYVLYQQMLKHNALFVGADVGGAKS-------GI 778
Query: 453 LPQRQISNYFVQFRKIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFECTLERVIEELK 511
+ ++N +Q RKI NHP + + S + R L + FE L+RV+ + K
Sbjct: 779 ---KGLNNKIMQLRKICNHPFVFEEVESVLNSSRLTNDLIWRVSGKFEL-LDRVLPKFK 833
>RGD|1594200 [details] [associations]
symbol:LOC680231 "similar to chromodomain helicase DNA binding
protein 9" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 RGD:1594200 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 OrthoDB:EOG4548XQ IPI:IPI00957597
Ensembl:ENSRNOT00000018201 Uniprot:D3ZVE2
Length = 2881
Score = 376 (137.4 bits), Expect = 7.5e-33, P = 7.5e-33
Identities = 108/318 (33%), Positives = 165/318 (51%)
Query: 168 LKPYQLVGVNFLLL-LYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCP 226
L+ YQL G+N+LL Y + ILADEMGLGKTIQ+IT+L + L GP LI+ P
Sbjct: 859 LREYQLEGLNWLLFNWYNR--RNCILADEMGLGKTIQSITFLYEVL-LTGIRGPFLIIAP 915
Query: 227 ASVLENWERELKKWCPSFSVLQYHGA--GRTA------YSRELSSLAKAGLPPPFNVLLV 278
S + NWERE + W +V+ YHG+ R Y R+ G F ++
Sbjct: 916 LSTIANWEREFRTWT-DINVVVYHGSLISRQMIQQYEMYFRDSQGRIIRGAYR-FQAIIT 973
Query: 279 CYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLT 338
+ + + L W CV++DEAH LK+KN + L + N +++LT
Sbjct: 974 TFEMILGGCGE-------LNAIEWRCVIIDEAHRLKNKNCKLLEGLKLM--NLEHKVLLT 1024
Query: 339 GTPLQNDLHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFILRRLKSD 398
GTPLQN + EL+SLL F+ P F +E +++ + + + + ++++IL P +LRRLK D
Sbjct: 1025 GTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKED 1084
Query: 399 VMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQI 458
V ++L PK + + V + Q+ YR +E+ + LS T V P +
Sbjct: 1085 VEKRLAPKEETIIEVELTNIQKKYYRAILEK-------NFSFLSKGAGQTNV---PN--L 1132
Query: 459 SNYFVQFRKIANHPLLVR 476
N ++ RK NHP L++
Sbjct: 1133 VNTMMELRKCCNHPYLIK 1150
>RGD|1311923 [details] [associations]
symbol:Chd3 "chromodomain helicase DNA binding protein 3"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005813 "centrosome" evidence=ISO]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISO]
[GO:0007051 "spindle organization" evidence=ISO] [GO:0016581 "NuRD
complex" evidence=ISO] [GO:0045111 "intermediate filament
cytoskeleton" evidence=ISO] [GO:0051297 "centrosome organization"
evidence=ISO] InterPro:IPR001841 InterPro:IPR009071
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326
IPI:IPI00369880 EMBL:AY903245 EMBL:AY903246 UniGene:Rn.232095
STRING:Q2KML1 UCSC:RGD:1311923 Genevestigator:Q2KML1 Uniprot:Q2KML1
Length = 1925
Score = 372 (136.0 bits), Expect = 1.2e-32, P = 1.2e-32
Identities = 108/322 (33%), Positives = 158/322 (49%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L YQL G+N+L + +G ILADEMGLGKTIQ I +L L + GP L+ P
Sbjct: 692 LHMYQLEGLNWLRFSWAQG-TDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAPL 750
Query: 228 SVLENWERELKKWCPSFSVLQYHG-AGRTAYSRELS-----SLAKAGLPP---------P 272
S + NWERE + W P F V+ Y G A RE + K G
Sbjct: 751 STIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQVK 810
Query: 273 FNVLLVCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNAN 332
F+VLL Y L ++ D+ L RW+C+++DEAH LK+ S ++ L +
Sbjct: 811 FHVLLTSYELI---TI----DQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGY--KID 861
Query: 333 QRLMLTGTPLQNDLHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFIL 392
+L+LTGTPLQN+L EL+ LL F+ P+ F + L++ + D I ++ +LGP +L
Sbjct: 862 HKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHML 921
Query: 393 RRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGV 452
RRLK+DV + + K + + V + P + Y Y+ + L+ V +
Sbjct: 922 RRLKADVFKNMPAKTELIVRVELS-PMQKKY------YKYILTRNFEALNSRGGGNQVSL 974
Query: 453 LPQRQISNYFVQFRKIANHPLL 474
L N + +K NHP L
Sbjct: 975 L------NIMMDLKKCCNHPYL 990
>UNIPROTKB|F1N544 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR EMBL:DAAA02048806
IPI:IPI00716282 Ensembl:ENSBTAT00000019119 ArrayExpress:F1N544
Uniprot:F1N544
Length = 1998
Score = 372 (136.0 bits), Expect = 1.3e-32, P = 1.3e-32
Identities = 108/322 (33%), Positives = 158/322 (49%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L YQL G+N+L + +G ILADEMGLGKTIQ I +L L + GP L+ P
Sbjct: 732 LHMYQLEGLNWLRFSWAQG-TDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAPL 790
Query: 228 SVLENWERELKKWCPSFSVLQYHG-AGRTAYSRELS-----SLAKAGLPP---------P 272
S + NWERE + W P F V+ Y G A RE + K G
Sbjct: 791 STIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQVK 850
Query: 273 FNVLLVCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNAN 332
F+VLL Y L ++ D+ L RW+C+++DEAH LK+ S ++ L +
Sbjct: 851 FHVLLTSYELI---TI----DQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGY--KID 901
Query: 333 QRLMLTGTPLQNDLHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFIL 392
+L+LTGTPLQN+L EL+ LL F+ P+ F + L++ + D I ++ +LGP +L
Sbjct: 902 HKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHML 961
Query: 393 RRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGV 452
RRLK+DV + + K + + V + P + Y Y+ + L+ V +
Sbjct: 962 RRLKADVFKNMPAKTELIVRVELS-PMQKKY------YKYILTRNFEALNSRGGGNQVSL 1014
Query: 453 LPQRQISNYFVQFRKIANHPLL 474
L N + +K NHP L
Sbjct: 1015 L------NIMMDLKKCCNHPYL 1030
>UNIPROTKB|E2RTI2 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR EMBL:AAEX03003635
EMBL:AAEX03003636 Ensembl:ENSCAFT00000026729 Uniprot:E2RTI2
Length = 1998
Score = 372 (136.0 bits), Expect = 1.3e-32, P = 1.3e-32
Identities = 108/322 (33%), Positives = 158/322 (49%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L YQL G+N+L + +G ILADEMGLGKTIQ I +L L + GP L+ P
Sbjct: 734 LHMYQLEGLNWLRFSWAQG-TDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAPL 792
Query: 228 SVLENWERELKKWCPSFSVLQYHG-AGRTAYSRELS-----SLAKAGLPP---------P 272
S + NWERE + W P F V+ Y G A RE + K G
Sbjct: 793 STIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQVK 852
Query: 273 FNVLLVCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNAN 332
F+VLL Y L ++ D+ L RW+C+++DEAH LK+ S ++ L +
Sbjct: 853 FHVLLTSYELI---TI----DQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGY--KID 903
Query: 333 QRLMLTGTPLQNDLHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFIL 392
+L+LTGTPLQN+L EL+ LL F+ P+ F + L++ + D I ++ +LGP +L
Sbjct: 904 HKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHML 963
Query: 393 RRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGV 452
RRLK+DV + + K + + V + P + Y Y+ + L+ V +
Sbjct: 964 RRLKADVFKNMPAKTELIVRVELS-PMQKKY------YKYILTRNFEALNSRGGGNQVSL 1016
Query: 453 LPQRQISNYFVQFRKIANHPLL 474
L N + +K NHP L
Sbjct: 1017 L------NIMMDLKKCCNHPYL 1032
>UNIPROTKB|Q12873 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0004386 "helicase activity" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0008270
"zinc ion binding" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007051 "spindle organization" evidence=IDA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0051297 "centrosome organization" evidence=IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=TAS] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=TAS] [GO:0016581 "NuRD complex" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IDA] InterPro:IPR001841
InterPro:IPR009071 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
EMBL:CH471108 GO:GO:0005730 GO:GO:0051297 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006357 GO:GO:0006351
GO:GO:0016568 Gene3D:1.10.30.10 GO:GO:0045111 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004003
InterPro:IPR019786 PROSITE:PS01359
Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0007051 GO:GO:0016581 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 HOGENOM:HOG000231124
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1107 EMBL:U91543 EMBL:AF006515 EMBL:U08379 IPI:IPI00373870
IPI:IPI00411592 RefSeq:NP_001005271.2 RefSeq:NP_001005273.1
RefSeq:NP_005843.2 UniGene:Hs.25601 ProteinModelPortal:Q12873
SMR:Q12873 DIP:DIP-32496N IntAct:Q12873 MINT:MINT-1185641
STRING:Q12873 PhosphoSite:Q12873 DMDM:88911273 PaxDb:Q12873
PRIDE:Q12873 Ensembl:ENST00000330494 Ensembl:ENST00000358181
GeneID:1107 KEGG:hsa:1107 UCSC:uc002gje.2 UCSC:uc002gjf.2
GeneCards:GC17P007788 H-InvDB:HIX0013516 HGNC:HGNC:1918
HPA:HPA043368 MIM:602120 neXtProt:NX_Q12873 PharmGKB:PA26454
HOVERGEN:HBG005326 KO:K11642 PhylomeDB:Q12873 ChiTaRS:CHD3
GenomeRNAi:1107 NextBio:4590 ArrayExpress:Q12873 Bgee:Q12873
CleanEx:HS_CHD3 Genevestigator:Q12873 GermOnline:ENSG00000170004
Uniprot:Q12873
Length = 2000
Score = 372 (136.0 bits), Expect = 1.3e-32, P = 1.3e-32
Identities = 108/322 (33%), Positives = 158/322 (49%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L YQL G+N+L + +G ILADEMGLGKTIQ I +L L + GP L+ P
Sbjct: 736 LHMYQLEGLNWLRFSWAQG-TDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAPL 794
Query: 228 SVLENWERELKKWCPSFSVLQYHG-AGRTAYSRELS-----SLAKAGLPP---------P 272
S + NWERE + W P F V+ Y G A RE + K G
Sbjct: 795 STIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQVK 854
Query: 273 FNVLLVCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNAN 332
F+VLL Y L ++ D+ L RW+C+++DEAH LK+ S ++ L +
Sbjct: 855 FHVLLTSYELI---TI----DQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGY--KID 905
Query: 333 QRLMLTGTPLQNDLHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFIL 392
+L+LTGTPLQN+L EL+ LL F+ P+ F + L++ + D I ++ +LGP +L
Sbjct: 906 HKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHML 965
Query: 393 RRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGV 452
RRLK+DV + + K + + V + P + Y Y+ + L+ V +
Sbjct: 966 RRLKADVFKNMPAKTELIVRVELS-PMQKKY------YKYILTRNFEALNSRGGGNQVSL 1018
Query: 453 LPQRQISNYFVQFRKIANHPLL 474
L N + +K NHP L
Sbjct: 1019 L------NIMMDLKKCCNHPYL 1034
>UNIPROTKB|F1ST12 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 CTD:1107 KO:K11642 OMA:EPEPGYR
EMBL:CU972380 RefSeq:XP_003132000.1 UniGene:Ssc.1663
Ensembl:ENSSSCT00000019548 GeneID:100188906 KEGG:ssc:100188906
Uniprot:F1ST12
Length = 2002
Score = 372 (136.0 bits), Expect = 1.3e-32, P = 1.3e-32
Identities = 108/322 (33%), Positives = 158/322 (49%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L YQL G+N+L + +G ILADEMGLGKTIQ I +L L + GP L+ P
Sbjct: 736 LHMYQLEGLNWLRFSWAQG-TDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAPL 794
Query: 228 SVLENWERELKKWCPSFSVLQYHG-AGRTAYSRELS-----SLAKAGLPP---------P 272
S + NWERE + W P F V+ Y G A RE + K G
Sbjct: 795 STIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQVK 854
Query: 273 FNVLLVCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNAN 332
F+VLL Y L ++ D+ L RW+C+++DEAH LK+ S ++ L +
Sbjct: 855 FHVLLTSYELI---TI----DQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGY--KID 905
Query: 333 QRLMLTGTPLQNDLHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFIL 392
+L+LTGTPLQN+L EL+ LL F+ P+ F + L++ + D I ++ +LGP +L
Sbjct: 906 HKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHML 965
Query: 393 RRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGV 452
RRLK+DV + + K + + V + P + Y Y+ + L+ V +
Sbjct: 966 RRLKADVFKNMPAKTELIVRVELS-PMQKKY------YKYILTRNFEALNSRGGGNQVSL 1018
Query: 453 LPQRQISNYFVQFRKIANHPLL 474
L N + +K NHP L
Sbjct: 1019 L------NIMMDLKKCCNHPYL 1034
>UNIPROTKB|F1LPP7 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 IPI:IPI00369880
Ensembl:ENSRNOT00000057060 Uniprot:F1LPP7
Length = 2020
Score = 372 (136.0 bits), Expect = 1.3e-32, P = 1.3e-32
Identities = 108/322 (33%), Positives = 158/322 (49%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L YQL G+N+L + +G ILADEMGLGKTIQ I +L L + GP L+ P
Sbjct: 787 LHMYQLEGLNWLRFSWAQG-TDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAPL 845
Query: 228 SVLENWERELKKWCPSFSVLQYHG-AGRTAYSRELS-----SLAKAGLPP---------P 272
S + NWERE + W P F V+ Y G A RE + K G
Sbjct: 846 STIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQVK 905
Query: 273 FNVLLVCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNAN 332
F+VLL Y L ++ D+ L RW+C+++DEAH LK+ S ++ L +
Sbjct: 906 FHVLLTSYELI---TI----DQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGY--KID 956
Query: 333 QRLMLTGTPLQNDLHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFIL 392
+L+LTGTPLQN+L EL+ LL F+ P+ F + L++ + D I ++ +LGP +L
Sbjct: 957 HKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHML 1016
Query: 393 RRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGV 452
RRLK+DV + + K + + V + P + Y Y+ + L+ V +
Sbjct: 1017 RRLKADVFKNMPAKTELIVRVELS-PMQKKY------YKYILTRNFEALNSRGGGNQVSL 1069
Query: 453 LPQRQISNYFVQFRKIANHPLL 474
L N + +K NHP L
Sbjct: 1070 L------NIMMDLKKCCNHPYL 1085
>UNIPROTKB|F1M7Q0 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR
IPI:IPI00959834 Ensembl:ENSRNOT00000012983 Uniprot:F1M7Q0
Length = 2054
Score = 372 (136.0 bits), Expect = 1.3e-32, P = 1.3e-32
Identities = 108/322 (33%), Positives = 158/322 (49%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L YQL G+N+L + +G ILADEMGLGKTIQ I +L L + GP L+ P
Sbjct: 787 LHMYQLEGLNWLRFSWAQG-TDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAPL 845
Query: 228 SVLENWERELKKWCPSFSVLQYHG-AGRTAYSRELS-----SLAKAGLPP---------P 272
S + NWERE + W P F V+ Y G A RE + K G
Sbjct: 846 STIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQVK 905
Query: 273 FNVLLVCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNAN 332
F+VLL Y L ++ D+ L RW+C+++DEAH LK+ S ++ L +
Sbjct: 906 FHVLLTSYELI---TI----DQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGY--KID 956
Query: 333 QRLMLTGTPLQNDLHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFIL 392
+L+LTGTPLQN+L EL+ LL F+ P+ F + L++ + D I ++ +LGP +L
Sbjct: 957 HKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHML 1016
Query: 393 RRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGV 452
RRLK+DV + + K + + V + P + Y Y+ + L+ V +
Sbjct: 1017 RRLKADVFKNMPAKTELIVRVELS-PMQKKY------YKYILTRNFEALNSRGGGNQVSL 1069
Query: 453 LPQRQISNYFVQFRKIANHPLL 474
L N + +K NHP L
Sbjct: 1070 L------NIMMDLKKCCNHPYL 1085
>UNIPROTKB|E9PG89 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0006333 "chromatin assembly or
disassembly" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IDA] InterPro:IPR001841 InterPro:IPR009071
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005730 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 GO:GO:0045111
GO:GO:0006333 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1107 RefSeq:NP_001005271.2 UniGene:Hs.25601 GeneID:1107
KEGG:hsa:1107 HGNC:HGNC:1918 KO:K11642 ChiTaRS:CHD3 GenomeRNAi:1107
NextBio:4590 EMBL:AC104581 IPI:IPI00465222
ProteinModelPortal:E9PG89 SMR:E9PG89 PRIDE:E9PG89
Ensembl:ENST00000380358 UCSC:uc002gjd.2 OMA:EPEPGYR
ArrayExpress:E9PG89 Bgee:E9PG89 Uniprot:E9PG89
Length = 2059
Score = 372 (136.0 bits), Expect = 1.3e-32, P = 1.3e-32
Identities = 108/322 (33%), Positives = 158/322 (49%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L YQL G+N+L + +G ILADEMGLGKTIQ I +L L + GP L+ P
Sbjct: 795 LHMYQLEGLNWLRFSWAQG-TDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAPL 853
Query: 228 SVLENWERELKKWCPSFSVLQYHG-AGRTAYSRELS-----SLAKAGLPP---------P 272
S + NWERE + W P F V+ Y G A RE + K G
Sbjct: 854 STIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQVK 913
Query: 273 FNVLLVCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNAN 332
F+VLL Y L ++ D+ L RW+C+++DEAH LK+ S ++ L +
Sbjct: 914 FHVLLTSYELI---TI----DQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGY--KID 964
Query: 333 QRLMLTGTPLQNDLHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFIL 392
+L+LTGTPLQN+L EL+ LL F+ P+ F + L++ + D I ++ +LGP +L
Sbjct: 965 HKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHML 1024
Query: 393 RRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGV 452
RRLK+DV + + K + + V + P + Y Y+ + L+ V +
Sbjct: 1025 RRLKADVFKNMPAKTELIVRVELS-PMQKKY------YKYILTRNFEALNSRGGGNQVSL 1077
Query: 453 LPQRQISNYFVQFRKIANHPLL 474
L N + +K NHP L
Sbjct: 1078 L------NIMMDLKKCCNHPYL 1093
>ASPGD|ASPL0000052010 [details] [associations]
symbol:AN1255 species:162425 "Emericella nidulans"
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0031934 "mating-type region
heterochromatin" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000070
"mitotic sister chromatid segregation" evidence=IEA] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IEA]
[GO:0060303 "regulation of nucleosome density" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 EMBL:BN001308 GO:GO:0003677 EMBL:AACD01000017
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
KO:K11367 HOGENOM:HOG000207917 OrthoDB:EOG4TF3TB RefSeq:XP_658859.1
ProteinModelPortal:Q5BDX5 STRING:Q5BDX5
EnsemblFungi:CADANIAT00001368 GeneID:2877029 KEGG:ani:AN1255.2
OMA:GPRRMAI Uniprot:Q5BDX5
Length = 1517
Score = 367 (134.2 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 91/271 (33%), Positives = 143/271 (52%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
LK +Q+ GVNF+ + K +LADEMGLGKT+Q + ++ L+H+ GP ++V P
Sbjct: 446 LKEFQVKGVNFMAFNWVKN-RNVVLADEMGLGKTVQTVAFISWLRHVRRQQGPFVVVVPL 504
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLP--PPFNVLLVCYSLFER 285
S + +W W P + + Y+G + + L G P P FNVLL Y E
Sbjct: 505 STMPSWAETFDNWSPDLNYVVYNGNEASRNVLKEYELMVDGNPRRPKFNVLLTTY---EY 561
Query: 286 HSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
V D L ++ W + +DEAH LK+++S + L N+ RL++TGTP+QN+
Sbjct: 562 VLV----DSSFLSQFNWQFMAVDEAHRLKNRDSQLYIKLQEF--NSPARLLITGTPIQNN 615
Query: 346 LHELWSLLEFMMPDLFATEDVDLKKLLNGEDR-DLIGRMKSILGPFILRRLKSDVMQQLV 404
L EL +LL+F+ P L D D+ LN E + + + + PF+LRR K+ V L
Sbjct: 616 LAELSALLDFLNPGL-VNVDADMD--LNSEAASEKLAELTKAISPFMLRRTKTKVESDLP 672
Query: 405 PKIQWVEYVTMERPQEDAYR-VAIEEYRAVS 434
PK + + V + Q + Y+ + + Y A++
Sbjct: 673 PKTEKIIRVELSDVQLEYYKNILTKNYAALN 703
Score = 159 (61.0 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 47/147 (31%), Positives = 77/147 (52%)
Query: 330 NANQRLMLTGTPLQNDLHELWSLLEFMMPDLFATEDVDLKKLLNGEDR-DLIGRMKSILG 388
N+ RL++TGTP+QN+L EL +LL+F+ P L D D+ LN E + + + +
Sbjct: 600 NSPARLLITGTPIQNNLAELSALLDFLNPGL-VNVDADMD--LNSEAASEKLAELTKAIS 656
Query: 389 PFILRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLAT 448
PF+LRR K+ V L PK + + V + D V +E Y+ + A L++
Sbjct: 657 PFMLRRTKTKVESDLPPKTEKIIRVELS----D---VQLEYYKNILTKNYAALNE----- 704
Query: 449 IVGVLPQRQ-ISNYFVQFRKIANHPLL 474
G Q+Q + N ++ +K +NHP +
Sbjct: 705 --GTKGQKQSLLNIMMELKKASNHPFM 729
>TAIR|locus:2054955 [details] [associations]
symbol:ASG3 "ALTERED SEED GERMINATION 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002685
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 IPI:IPI00520375 RefSeq:NP_973689.2 UniGene:At.47803
ProteinModelPortal:F4IV45 SMR:F4IV45 PRIDE:F4IV45
EnsemblPlants:AT2G44980.2 GeneID:819106 KEGG:ath:AT2G44980
OMA:WALMHFC PhylomeDB:F4IV45 ArrayExpress:F4IV45 Uniprot:F4IV45
Length = 877
Score = 363 (132.8 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 111/358 (31%), Positives = 181/358 (50%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
LKP+Q+ GV++L+ Y G+ + D+MGLGKT+QAI++L LK PGP L++CP
Sbjct: 51 LKPHQVEGVSWLIQKYLLGVNVVLELDQMGLGKTLQAISFLSYLKFRQGLPGPFLVLCPL 110
Query: 228 SVLENWERELKKWCPSFSVLQYHGAG--RTAYSRELSSLAKA---GLPPPFNVLLVCYSL 282
SV + W E+ ++ P+ VL+Y G R + + K G PF+VLL Y +
Sbjct: 111 SVTDGWVSEINRFTPNLEVLRYVGDKYCRLDMRKSMYDHVKKSSKGHFLPFDVLLTTYDI 170
Query: 283 FERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPL 342
D+ L + W ++DEA LK+ NS + N++ +RL++TGTP+
Sbjct: 171 -------ALVDQDFLSQIPWQYAIIDEAQRLKNPNSVLY-NVLLEQFLIPRRLLITGTPI 222
Query: 343 QNDLHELWSLLEFMMPDLFATEDVDLKKL------LNG----EDRDLIGRMKSILGPFIL 392
QN+L ELW+L+ F MP +F T D L L+G D++ +K ILG F+L
Sbjct: 223 QNNLTELWALMHFCMPLVFGTLDQFLSAFKETGDGLSGLDVSNDKETYKSLKFILGAFML 282
Query: 393 RRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGV 452
RR KS +++ + + +T+ P + + Y ++ R + L +L++ G
Sbjct: 283 RRTKSLLIESGNLVLPPLTELTVMVPLVSLQK---KIYTSILRKELPGL--LELSS--GG 335
Query: 453 LPQRQISNYFVQFRKIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFECTLERVIEEL 510
+ N +Q RK +HP L I + F + H + A G L+++++ L
Sbjct: 336 SNHTSLQNIVIQLRKACSHPYLFPGIEPEP----FEEGEHLVQASGKLLVLDQLLKRL 389
>ZFIN|ZDB-GENE-041111-187 [details] [associations]
symbol:chd4a "chromodomain helicase DNA binding
protein 4a" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-041111-187
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX004850
IPI:IPI00962864 Ensembl:ENSDART00000005453 ArrayExpress:F1QWV5
Bgee:F1QWV5 Uniprot:F1QWV5
Length = 1930
Score = 368 (134.6 bits), Expect = 3.2e-32, P = 3.2e-32
Identities = 105/322 (32%), Positives = 159/322 (49%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L PYQL G+N+L + +G ILADEMGLGKT+Q +L L + GP L+ P
Sbjct: 710 LHPYQLEGLNWLRFSWAQG-TDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPL 768
Query: 228 SVLENWERELKKWCPSFSVLQYHG-AGRTAYSREL-----SSLAKAGLPPP--------- 272
S + NWERE + W P V+ Y G A RE ++ + G P
Sbjct: 769 STIINWEREFEMWAPDMYVVTYVGDKDSRAVIRENEFSFENNAIRGGKKPSKMKKEASVK 828
Query: 273 FNVLLVCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNAN 332
F+VLL Y L ++ D +L W+C+++DEAH LK+ S ++ L +
Sbjct: 829 FHVLLTSYELI---TI----DTAVLGSIDWACLVVDEAHRLKNNQSKFFRILNNYP--LQ 879
Query: 333 QRLMLTGTPLQNDLHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFIL 392
+L+LTGTPLQN+L EL+ LL F+ P+ F+ + L++ + D I ++ +LGP +L
Sbjct: 880 HKLLLTGTPLQNNLEELFHLLNFLTPERFSNLEGFLEEFADIAKEDQIKKLHDMLGPHML 939
Query: 393 RRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGV 452
RRLK+DV + + K + + V + P + Y Y+ + L+ V +
Sbjct: 940 RRLKADVFKHMPSKTELIVRVELS-PMQKKY------YKFILTRNFEALNTRGGGNQVSL 992
Query: 453 LPQRQISNYFVQFRKIANHPLL 474
L N + +K NHP L
Sbjct: 993 L------NVVMDLKKCCNHPYL 1008
>DICTYBASE|DDB_G0280705 [details] [associations]
symbol:DDB_G0280705 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00717
dictyBase:DDB_G0280705 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0006357 GO:GO:0003682 EMBL:AAFI02000037
GO:GO:0004003 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
KO:K14437 RefSeq:XP_641133.1 ProteinModelPortal:Q54UZ8
EnsemblProtists:DDB0220644 GeneID:8622691 KEGG:ddi:DDB_G0280705
InParanoid:Q54UZ8 OMA:YPHERID ProtClustDB:CLSZ2846801
Uniprot:Q54UZ8
Length = 2373
Score = 368 (134.6 bits), Expect = 4.2e-32, P = 4.2e-32
Identities = 104/325 (32%), Positives = 169/325 (52%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+PYQL G+N+L + + +IL DEMGLGKT+Q+++ L L+ ++ GP L+V P
Sbjct: 509 LRPYQLEGLNWLSFCWHEQ-RNSILGDEMGLGKTVQSVSILETLRKVHGIRGPFLVVAPL 567
Query: 228 SVLENWERELKKWCPSFSVLQYH--GAGRTA------YSREL------SSLAKAGLPPPF 273
+ + +W+RE + W + L YH GAGR Y ++ +S +G F
Sbjct: 568 TTIPHWKREFENWT-DMNALVYHDSGAGRPICRNYEFYLKDKDGGGGGASGGASGKITKF 626
Query: 274 NVLLVCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQ 333
NVL+ Y + ++ DR L R W +++DEAH LK+K+ L S + +
Sbjct: 627 NVLITTYEM----AIT---DRTHLSRIPWKYLVIDEAHRLKNKSCKLTIELRSYS--FDH 677
Query: 334 RLMLTGTPLQNDLHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFILR 393
L+LTGTPLQN+ ELWSLL F+ P F+ D L + + ++ + +++IL P++LR
Sbjct: 678 LLLLTGTPLQNNTQELWSLLNFLDPKQFSNLDQFLLEYGDLKESSQVESLQAILKPYLLR 737
Query: 394 RLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVL 453
R+K V + + PK + + V + Q+ YR E+ + R + K +
Sbjct: 738 RMKERVEKSIAPKEETIVEVELTTVQKKYYRAIYEKNFSFLR-KGGKSNQG--------- 787
Query: 454 PQRQISNYFVQFRKIANHPLLVRRI 478
P + N ++ RK NHP L + +
Sbjct: 788 PS--LLNIMMELRKCCNHPYLTKGV 810
>ZFIN|ZDB-GENE-030131-6320 [details] [associations]
symbol:chd8 "chromodomain helicase DNA binding
protein 8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0071339 "MLL1 complex" evidence=ISS] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00717 Pfam:PF00385
ZFIN:ZDB-GENE-030131-6320 GO:GO:0005524 GO:GO:0006355 GO:GO:0016055
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071339
InterPro:IPR023780 PROSITE:PS00598 EMBL:AL928674 IPI:IPI00919855
UniGene:Dr.81397 PRIDE:B0R0I6 HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC
Uniprot:B0R0I6
Length = 2511
Score = 368 (134.6 bits), Expect = 4.5e-32, P = 4.5e-32
Identities = 107/327 (32%), Positives = 167/327 (51%)
Query: 159 DEDSDFQP--VLKPYQLVGVNFLLL-LYRKGIAGAILADEMGLGKTIQAITYLMLLKHLN 215
DE ++++ L+ YQL GVN+LL Y + ILADEMGLGKTIQ+I L +
Sbjct: 836 DESTEYKNGNQLREYQLEGVNWLLFNWYNR--QNCILADEMGLGKTIQSIALLSEMFSAG 893
Query: 216 NDPGPHLIVCPASVLENWERELKKWCPSFSVLQYHG--AGRTAYSR-ELSSLAKAG-LPP 271
P +I+ P S + NWERE W + + YHG A R + E+ G L P
Sbjct: 894 VQ-SPFMIIAPLSTITNWEREFSNWT-DMNAIVYHGSLASRQMIQQYEMYCKDDKGHLIP 951
Query: 272 ---PFNVLLVCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVA 328
F+ L+ + + D L+ W CV++DEAH LK++N +L +
Sbjct: 952 GAYKFDALITTFEMI-------LSDCPELREISWRCVVIDEAHRLKNRNCKLLDSLKML- 1003
Query: 329 RNANQRLMLTGTPLQNDLHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILG 388
+++LTGTPLQN + EL+SLL F+ P F +E L++ + + + + +++SIL
Sbjct: 1004 -EIEHKVLLTGTPLQNTVEELFSLLHFLEPAQFPSEIEFLREFGDLKTEEQVQKLQSILK 1062
Query: 389 PFILRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLAT 448
P +LRRLK DV + L PK + + V + Q+ YR +E R S + ++++
Sbjct: 1063 PMMLRRLKEDVEKNLAPKQETIIEVELTDVQKKYYRAILE--RNFSFLSMGATQNSNVPN 1120
Query: 449 IVGVLPQRQISNYFVQFRKIANHPLLV 475
++ N ++ RK NHP L+
Sbjct: 1121 LL---------NTMMELRKCCNHPYLI 1138
>UNIPROTKB|F1NH79 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:AADN02061139 EMBL:AADN02061140 EMBL:AADN02061141
EMBL:AADN02061142 EMBL:AADN02061143 IPI:IPI00598956
Ensembl:ENSGALT00000023339 OMA:DGEHEHQ Uniprot:F1NH79
Length = 1895
Score = 366 (133.9 bits), Expect = 5.1e-32, P = 5.1e-32
Identities = 107/341 (31%), Positives = 169/341 (49%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L PYQL G+N+L + +G ILADEMGLGKT+Q +L L + GP L+ P
Sbjct: 696 LHPYQLEGLNWLRFSWAQG-TDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPL 754
Query: 228 SVLENWERELKKWCPSFSVLQYHG-AGRTAYSRE--------------LSSLAKAGLPPP 272
S + NWERE + W P V+ Y G A RE +S K
Sbjct: 755 STIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFTFEDNAIRGGKKASRMKKEAAVK 814
Query: 273 FNVLLVCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNAN 332
F+VLL Y L ++ D IL W+C+++DEAH LK+ S ++ L +
Sbjct: 815 FHVLLTSYELI---TI----DMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYS--LQ 865
Query: 333 QRLMLTGTPLQNDLHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFIL 392
+L+LTGTPLQN+L EL+ LL F+ P+ F + L++ + D I ++ +LGP +L
Sbjct: 866 HKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHML 925
Query: 393 RRLKSDVMQQLVPKIQWVEYVTMERPQEDAYR-VAIEEYRAVSRARIAKLSDADLATIVG 451
RRLK+DV + + K + + V + Q+ Y+ + + A++ A+ ++ +
Sbjct: 926 RRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALN----ARGGGNQVSLLNV 981
Query: 452 VLPQRQISNYFVQFRKIANH-PLLVRRIYSDDDVVRFAKKL 491
V+ ++ N+ F A P + +Y ++R + KL
Sbjct: 982 VMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKL 1022
>UNIPROTKB|E1C188 [details] [associations]
symbol:Gga.53842 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00717
GO:GO:0005524 GO:GO:0003677 GO:GO:0003682 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR017877
PROSITE:PS50090 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GeneTree:ENSGT00530000063427 EMBL:AADN02034826 IPI:IPI00592312
Ensembl:ENSGALT00000003680 ArrayExpress:E1C188 Uniprot:E1C188
Length = 3044
Score = 367 (134.2 bits), Expect = 7.3e-32, P = 7.3e-32
Identities = 95/267 (35%), Positives = 141/267 (52%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQ +G+++L LYRK + G ILADE GLGKT+Q I + L + GPHL+V +
Sbjct: 1091 LREYQKIGLDWLAKLYRKNLNG-ILADEAGLGKTVQIIAFFAHLACNEGNWGPHLVVVRS 1149
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPP-PFNVLLVCYS-LFER 285
+ WE ELK+WCP +L Y G+ REL + + P FNV + Y LF+
Sbjct: 1150 CNILKWELELKRWCPGLKILLYFGS-----QRELRAKRQEWSEPNSFNVCITSYKQLFKG 1204
Query: 286 HSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
H K RW +++DE +K+ W+ L S+ + RL+L TPL N
Sbjct: 1205 HPAFMK--------MRWKYLIVDEMQQIKNMTEKHWEALFSL--RSQHRLLLIDTPLHNT 1254
Query: 346 LHELWSLLEFMMPDLFATEDVDLK-KLLNGEDRD----LIGRMKSILGPFILRRLKSDVM 400
L ELW+++ F++P + + +D K N E++D L+ R+ ++ PFILRR K DV
Sbjct: 1255 LMELWTMVHFLIPGI-SRPYLDFPVKAPNEENQDYCHKLVIRLHRMIQPFILRRSKRDVE 1313
Query: 401 QQLVPKIQWVEYVTMERPQEDAYRVAI 427
+QL K + V + Q+ Y I
Sbjct: 1314 KQLTKKYEHVLKCRLSSRQKAMYEDVI 1340
Score = 178 (67.7 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 54/182 (29%), Positives = 90/182 (49%)
Query: 299 RWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSLLEFMMP 358
+ RW +++DE +K+ W+ L S+ + RL+L TPL N L ELW+++ F++P
Sbjct: 1210 KMRWKYLIVDEMQQIKNMTEKHWEALFSL--RSQHRLLLIDTPLHNTLMELWTMVHFLIP 1267
Query: 359 DLFATEDVDLK-KLLNGEDRD----LIGRMKSILGPFILRRLKSDVMQQLVPKIQWVEYV 413
+ + +D K N E++D L+ R+ ++ PFILRR K DV +QL K + V
Sbjct: 1268 GI-SRPYLDFPVKAPNEENQDYCHKLVIRLHRMIQPFILRRSKRDVEKQLTKKYEHVLKC 1326
Query: 414 TMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQISNYFVQFRKIANHPL 473
+ Q+ Y I + A L +++ VL +Q ++I NHP
Sbjct: 1327 RLSSRQKAMYEDVILQ-PGTQEA----LKSGHFISVLHVL---------MQLQRICNHPD 1372
Query: 474 LV 475
L+
Sbjct: 1373 LI 1374
Score = 44 (20.5 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 16/51 (31%), Positives = 23/51 (45%)
Query: 246 VLQYHGAGRTAYSRELSSLAKAGLPP-PFNVLLVCYSLFERHSVQQKDDRK 295
V Q+ G ++L A+ G+PP P V L ++ S QQ D K
Sbjct: 524 VFQHPGVASGVPLQQLMPTAQGGMPPTPQTVQLTG----QKQSQQQYDPSK 570
>UNIPROTKB|E1C186 [details] [associations]
symbol:Gga.53842 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 Pfam:PF00176 PROSITE:PS51194 SMART:SM00717
GO:GO:0005524 GO:GO:0003677 GO:GO:0016607 GO:GO:0003682
GO:GO:0035267 GO:GO:0043968 GO:GO:0043967 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR017877
PROSITE:PS50090 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GeneTree:ENSGT00530000063427 OMA:MQKQKLQ EMBL:AADN02034826
IPI:IPI00587546 Ensembl:ENSGALT00000003682 ArrayExpress:E1C186
Uniprot:E1C186
Length = 3118
Score = 367 (134.2 bits), Expect = 7.5e-32, P = 7.5e-32
Identities = 95/267 (35%), Positives = 141/267 (52%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQ +G+++L LYRK + G ILADE GLGKT+Q I + L + GPHL+V +
Sbjct: 1091 LREYQKIGLDWLAKLYRKNLNG-ILADEAGLGKTVQIIAFFAHLACNEGNWGPHLVVVRS 1149
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPP-PFNVLLVCYS-LFER 285
+ WE ELK+WCP +L Y G+ REL + + P FNV + Y LF+
Sbjct: 1150 CNILKWELELKRWCPGLKILLYFGS-----QRELRAKRQEWSEPNSFNVCITSYKQLFKG 1204
Query: 286 HSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
H K RW +++DE +K+ W+ L S+ + RL+L TPL N
Sbjct: 1205 HPAFMK--------MRWKYLIVDEMQQIKNMTEKHWEALFSL--RSQHRLLLIDTPLHNT 1254
Query: 346 LHELWSLLEFMMPDLFATEDVDLK-KLLNGEDRD----LIGRMKSILGPFILRRLKSDVM 400
L ELW+++ F++P + + +D K N E++D L+ R+ ++ PFILRR K DV
Sbjct: 1255 LMELWTMVHFLIPGI-SRPYLDFPVKAPNEENQDYCHKLVIRLHRMIQPFILRRSKRDVE 1313
Query: 401 QQLVPKIQWVEYVTMERPQEDAYRVAI 427
+QL K + V + Q+ Y I
Sbjct: 1314 KQLTKKYEHVLKCRLSSRQKAMYEDVI 1340
Score = 178 (67.7 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 54/182 (29%), Positives = 90/182 (49%)
Query: 299 RWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSLLEFMMP 358
+ RW +++DE +K+ W+ L S+ + RL+L TPL N L ELW+++ F++P
Sbjct: 1210 KMRWKYLIVDEMQQIKNMTEKHWEALFSL--RSQHRLLLIDTPLHNTLMELWTMVHFLIP 1267
Query: 359 DLFATEDVDLK-KLLNGEDRD----LIGRMKSILGPFILRRLKSDVMQQLVPKIQWVEYV 413
+ + +D K N E++D L+ R+ ++ PFILRR K DV +QL K + V
Sbjct: 1268 GI-SRPYLDFPVKAPNEENQDYCHKLVIRLHRMIQPFILRRSKRDVEKQLTKKYEHVLKC 1326
Query: 414 TMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQISNYFVQFRKIANHPL 473
+ Q+ Y I + A L +++ VL +Q ++I NHP
Sbjct: 1327 RLSSRQKAMYEDVILQ-PGTQEA----LKSGHFISVLHVL---------MQLQRICNHPD 1372
Query: 474 LV 475
L+
Sbjct: 1373 LI 1374
Score = 44 (20.5 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 16/51 (31%), Positives = 23/51 (45%)
Query: 246 VLQYHGAGRTAYSRELSSLAKAGLPP-PFNVLLVCYSLFERHSVQQKDDRK 295
V Q+ G ++L A+ G+PP P V L ++ S QQ D K
Sbjct: 527 VFQHPGVASGVPLQQLMPTAQGGMPPTPQTVQLTG----QKQSQQQYDPSK 573
>UNIPROTKB|F5GWX5 [details] [associations]
symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:AC006064
IPI:IPI00000846 HGNC:HGNC:1919 ChiTaRS:CHD4
ProteinModelPortal:F5GWX5 SMR:F5GWX5 PRIDE:F5GWX5
Ensembl:ENST00000544040 UCSC:uc001qpn.3 ArrayExpress:F5GWX5
Bgee:F5GWX5 Uniprot:F5GWX5
Length = 1905
Score = 364 (133.2 bits), Expect = 8.4e-32, P = 8.4e-32
Identities = 106/341 (31%), Positives = 169/341 (49%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L PYQ+ G+N+L + +G ILADEMGLGKT+Q +L L + GP L+ P
Sbjct: 719 LHPYQMEGLNWLRFSWAQG-TDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPL 777
Query: 228 SVLENWERELKKWCPSFSVLQYHG-AGRTAYSRE--------------LSSLAKAGLPPP 272
S + NWERE + W P V+ Y G A RE +S K
Sbjct: 778 STIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASVK 837
Query: 273 FNVLLVCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNAN 332
F+VLL Y L ++ D IL W+C+++DEAH LK+ S ++ L +
Sbjct: 838 FHVLLTSYELI---TI----DMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYS--LQ 888
Query: 333 QRLMLTGTPLQNDLHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFIL 392
+L+LTGTPLQN+L EL+ LL F+ P+ F + L++ + D I ++ +LGP +L
Sbjct: 889 HKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHML 948
Query: 393 RRLKSDVMQQLVPKIQWVEYVTMERPQEDAYR-VAIEEYRAVSRARIAKLSDADLATIVG 451
RRLK+DV + + K + + V + Q+ Y+ + + A++ A+ ++ +
Sbjct: 949 RRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALN----ARGGGNQVSLLNV 1004
Query: 452 VLPQRQISNYFVQFRKIANH-PLLVRRIYSDDDVVRFAKKL 491
V+ ++ N+ F A P + +Y ++R + KL
Sbjct: 1005 VMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKL 1045
>UNIPROTKB|E2RHA0 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1108 KO:K11643 EMBL:AAEX03015287 RefSeq:XP_867754.2
Ensembl:ENSCAFT00000023774 GeneID:477714 KEGG:cfa:477714
Uniprot:E2RHA0
Length = 1912
Score = 364 (133.2 bits), Expect = 8.4e-32, P = 8.4e-32
Identities = 106/341 (31%), Positives = 169/341 (49%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L PYQ+ G+N+L + +G ILADEMGLGKT+Q +L L + GP L+ P
Sbjct: 726 LHPYQMEGLNWLRFSWAQG-TDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPL 784
Query: 228 SVLENWERELKKWCPSFSVLQYHG-AGRTAYSRE--------------LSSLAKAGLPPP 272
S + NWERE + W P V+ Y G A RE +S K
Sbjct: 785 STIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASVK 844
Query: 273 FNVLLVCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNAN 332
F+VLL Y L ++ D IL W+C+++DEAH LK+ S ++ L +
Sbjct: 845 FHVLLTSYELI---TI----DMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYS--LQ 895
Query: 333 QRLMLTGTPLQNDLHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDLIGRMKSILGPFIL 392
+L+LTGTPLQN+L EL+ LL F+ P+ F + L++ + D I ++ +LGP +L
Sbjct: 896 HKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHML 955
Query: 393 RRLKSDVMQQLVPKIQWVEYVTMERPQEDAYR-VAIEEYRAVSRARIAKLSDADLATIVG 451
RRLK+DV + + K + + V + Q+ Y+ + + A++ A+ ++ +
Sbjct: 956 RRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALN----ARGGGNQVSLLNV 1011
Query: 452 VLPQRQISNYFVQFRKIANH-PLLVRRIYSDDDVVRFAKKL 491
V+ ++ N+ F A P + +Y ++R + KL
Sbjct: 1012 VMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKL 1052
WARNING: HSPs involving 288 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.136 0.404 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 520 482 0.00080 119 3 11 22 0.38 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 538
No. of states in DFA: 620 (66 KB)
Total size of DFA: 303 KB (2156 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 37.05u 0.14s 37.19t Elapsed: 00:00:01
Total cpu time: 37.11u 0.14s 37.25t Elapsed: 00:00:01
Start: Tue May 21 02:57:32 2013 End: Tue May 21 02:57:33 2013
WARNINGS ISSUED: 2