BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039292
(520 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|E7F1C4|SMRDB_DANRE SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A containing DEAD/H box 1B OS=Danio
rerio GN=smarcad1b PE=3 SV=1
Length = 954
Score = 235 bits (599), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 140/373 (37%), Positives = 212/373 (56%), Gaps = 51/373 (13%)
Query: 162 SDFQPVLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPH 221
S FQ LKPYQL+G+N+L+LL++ ++G ILADEMGLGKTIQAI++L L N GPH
Sbjct: 425 STFQ--LKPYQLIGLNWLVLLHQNKLSG-ILADEMGLGKTIQAISFLAHLYQEGNH-GPH 480
Query: 222 LIVCPASVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYS 281
LI PAS L+NW REL WCPSF VL Y+G+ A R+ +N+++ Y+
Sbjct: 481 LITVPASTLDNWVRELNLWCPSFKVLVYYGS---ADDRKYMRYEILNQIVEYNIIVSTYN 537
Query: 282 LFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTP 341
L ++ DR + + + + DE H LK+ NS R+++LM++ NA RL+LTGTP
Sbjct: 538 L----AIGNSSDRSLFCKLKLEYAVFDEGHLLKNMNSLRYRHLMAI--NAKYRLLLTGTP 591
Query: 342 LQNDLHELWSLLEFMMPDLFATEDVDLKKLLNGE--------DRDLIGRMKSILGPFILR 393
LQN+L EL SLL F+MP++F++ + K+ + + +RD I K I+ PFILR
Sbjct: 592 LQNNLLELMSLLNFIMPNMFSSSTSQIAKMFSMKSSEEQSSFERDRITHAKLIMKPFILR 651
Query: 394 RLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVL 453
R+KS+V++QL K + VE+ M Q++ Y + + + S
Sbjct: 652 RVKSEVLKQLPAKEEQVEFCAMSERQQELYSALLHKLKHSSNGE---------------- 695
Query: 454 PQRQISNYFVQFRKIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFECTLER------VI 507
+R+++N +Q RK++NHPLL R+ Y+ +KL M + R +
Sbjct: 696 -KRELTNVMMQLRKMSNHPLLHRQFYT-------TEKLKAMSKLMLKEPSHRDADPALIK 747
Query: 508 EELKNYSDFSIHQ 520
E+++ SDF +H+
Sbjct: 748 EDMEVLSDFELHR 760
>sp|Q5FWR0|SMRCD_XENTR SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A containing DEAD/H box 1 OS=Xenopus
tropicalis GN=smarcad1 PE=2 SV=1
Length = 1003
Score = 230 bits (586), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 135/401 (33%), Positives = 223/401 (55%), Gaps = 42/401 (10%)
Query: 135 DRYAEVEASSVRIVTQSDIDDACG---DEDSDFQP--VLKPYQLVGVNFLLLLYRKGIAG 189
++ E+ + + VTQ D CG ++ S VLKPYQ +G+N+L LL++ +
Sbjct: 436 NKCEEISRTLTKQVTQLTEDGECGWNIEQPSIMSENLVLKPYQKIGLNWLALLHKHKV-N 494
Query: 190 AILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPASVLENWERELKKWCPSFSVLQY 249
ILADEMGLGKT+QAI +L L ++ D GPHL+V PAS ++NW RE +WCPS ++L Y
Sbjct: 495 MILADEMGLGKTVQAIAFLAHL-YVTGDSGPHLVVVPASTMDNWIREFNQWCPSMNILLY 553
Query: 250 HGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHSVQQKDDRKILKRWRWSCVLMDE 309
+G+ L K FNV++ Y+ ++ +DR + +R + + + DE
Sbjct: 554 YGSQEERKHLRYDILNKV---VEFNVIVTTYNC----AISSAEDRSLFRRLKLNFAVFDE 606
Query: 310 AHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSLLEFMMPDLFATEDVDLK 369
H LK+ ++ R+++LM++ NA RL+LTGTP+QN+L EL SLL F+MP +F++ ++K
Sbjct: 607 GHMLKNMSAIRYQHLMTL--NARSRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIK 664
Query: 370 KLLNGE----------DRDLIGRMKSILGPFILRRLKSDVMQQLVPKIQWVEYVTMERPQ 419
+L + + +++ I K I+ PFILRR+KS+V++QL PK +++ M + Q
Sbjct: 665 RLFSSKAKSTDEQTIFEKERIAHAKQIMKPFILRRVKSEVLKQLPPKQDKIKFCQMSKKQ 724
Query: 420 EDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQISNYFVQFRKIANHPLLVRRIY 479
E Y + + + +I ++ N + RK+ANHPLL R+ Y
Sbjct: 725 EQLYSDLLNKLK---------------KSIDATEKNSELCNVMMHLRKMANHPLLHRQYY 769
Query: 480 SDDDVVRFAKKLHPMGAFGFECTLERVIEELKNYSDFSIHQ 520
+ D +R KL + + + E+++ +DF +H+
Sbjct: 770 TADR-LRTMSKLMLKEPTHCDANPDLIFEDMEVMTDFELHR 809
>sp|Q9H4L7|SMRCD_HUMAN SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A containing DEAD/H box 1 OS=Homo
sapiens GN=SMARCAD1 PE=1 SV=2
Length = 1026
Score = 226 bits (575), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 133/368 (36%), Positives = 205/368 (55%), Gaps = 49/368 (13%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
LKPYQ VG+N+L L+++ G+ G ILADEMGLGKTIQAI +L L N+ GPHLIV PA
Sbjct: 497 LKPYQKVGLNWLALVHKHGLNG-ILADEMGLGKTIQAIAFLAYLYQEGNN-GPHLIVVPA 554
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
S ++NW RE+ WCP+ VL Y+G+ R+ +NV++ Y+ +
Sbjct: 555 STIDNWLREVNLWCPTLKVLCYYGSQE---ERKQIRFNIHSRYEDYNVIVTTYNC----A 607
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
+ DDR + +R + + + DE H LK+ S R+++LM++ NAN RL+LTGTP+QN+L
Sbjct: 608 ISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTI--NANNRLLLTGTPVQNNLL 665
Query: 348 ELWSLLEFMMPDLFATEDVDLKKLLNGE----------DRDLIGRMKSILGPFILRRLKS 397
EL SLL F+MP +F++ +++++ + + +++ I K I+ PFILRR+K
Sbjct: 666 ELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKERIAHAKQIIKPFILRRVKE 725
Query: 398 DVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQ 457
+V++QL PK +E M QE Y R+ K +I + +
Sbjct: 726 EVLKQLPPKKDRIELCAMSEKQEQLYLGLFN--------RLKK-------SINNLEKNTE 770
Query: 458 ISNYFVQFRKIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGF------ECTLERVIEELK 511
+ N +Q RK+ANHPLL R+ Y+ A+KL M E + + E+++
Sbjct: 771 MCNVMMQLRKMANHPLLHRQYYT-------AEKLKEMSQLMLKEPTHCEANPDLIFEDME 823
Query: 512 NYSDFSIH 519
+DF +H
Sbjct: 824 VMTDFELH 831
>sp|E1B7X9|SMRCD_BOVIN SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A containing DEAD/H box 1 OS=Bos
taurus GN=SMARCAD1 PE=3 SV=2
Length = 1028
Score = 224 bits (572), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 134/370 (36%), Positives = 206/370 (55%), Gaps = 53/370 (14%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
LKPYQ VG+N+L L+++ G+ G ILADEMGLGKTIQAI +L L N GPHLIV PA
Sbjct: 499 LKPYQKVGLNWLALVHKHGLNG-ILADEMGLGKTIQAIAFLAYLYQEGN-KGPHLIVVPA 556
Query: 228 SVLENWERELKKWCPSFSVLQYHGAG--RTAYSRELSSLAKAGLPPPFNVLLVCYSLFER 285
S ++NW RE+ WCP+ VL Y+G+ R + S + +NV++ Y+
Sbjct: 557 STIDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSRYEE-----YNVIVTTYNC--- 608
Query: 286 HSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
++ DDR + +R + + + DE H LK+ S R+++LM++ NAN RL+LTGTP+QN+
Sbjct: 609 -AISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTI--NANNRLLLTGTPVQNN 665
Query: 346 LHELWSLLEFMMPDLFATEDVDLKKLLNGE----------DRDLIGRMKSILGPFILRRL 395
L EL SLL F+MP +F++ +++++ + + +++ I K I+ PFILRR+
Sbjct: 666 LLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKPADEQSIYEKERIAHAKQIIKPFILRRV 725
Query: 396 KSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQ 455
K +V++QL PK +E M QE Y R+ K +I +
Sbjct: 726 KEEVLKQLPPKKDRIELCAMSEKQEQLYMNLFN--------RLKK-------SINNMEKN 770
Query: 456 RQISNYFVQFRKIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGF------ECTLERVIEE 509
++ N +Q RK+ANHPLL R+ Y+ A+KL M E + + E+
Sbjct: 771 TEMCNVMMQLRKMANHPLLHRQYYT-------AEKLKEMSQLMLKEPTHCEANPDLIFED 823
Query: 510 LKNYSDFSIH 519
++ +DF +H
Sbjct: 824 MEVMTDFELH 833
>sp|B0R061|SMRDA_DANRE SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A containing DEAD/H box 1A OS=Danio
rerio GN=smarcad1a PE=2 SV=1
Length = 972
Score = 223 bits (568), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 132/363 (36%), Positives = 208/363 (57%), Gaps = 43/363 (11%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQL+G+ +L+LL++ ++G ILADEMGLGKTIQAI +L L + GPHLI P+
Sbjct: 448 LQAYQLIGLKWLILLHQHKLSG-ILADEMGLGKTIQAIAFLAHL-YEKGIKGPHLITVPS 505
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRT-AYSRE--LSSLAKAGLPPPFNVLLVCYSLFE 284
S L+NW REL WCPS VL Y+G+ Y R+ L+ L FN+++ Y+L
Sbjct: 506 STLDNWVRELGLWCPSLKVLIYYGSVEDRKYLRQDILTGLI------DFNIIVSTYNL-- 557
Query: 285 RHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQN 344
++ DR + ++ + + DE H LK+ NS R+++LM++ NA RL+LTGTPLQN
Sbjct: 558 --TIGNDHDRSLFRKLKLKYAVFDEGHMLKNMNSLRYRHLMTI--NAEHRLLLTGTPLQN 613
Query: 345 DLHELWSLLEFMMPDLFATEDVDLKKLLNGE--------DRDLIGRMKSILGPFILRRLK 396
+L EL SLL F+MP +F++ + K+ + +D I + + I+ PFILRR+K
Sbjct: 614 NLLELMSLLNFIMPSMFSSSTSQISKMFSTRSSEEESSFHKDRIAQARLIMKPFILRRVK 673
Query: 397 SDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQR 456
S+V+++L PK++ +E M Q Y + + R+ K + D +R
Sbjct: 674 SEVLKELPPKMEKIEMCPMSDAQHKLYDILFK--------RLKKTPNGD---------KR 716
Query: 457 QISNYFVQFRKIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFECTLERVIEELKNYSDF 516
++ N +Q RK+ANHPLL R+ Y+ D + +K + ++ + E+++ SDF
Sbjct: 717 ELCNVMMQLRKMANHPLLHRQYYTSDKLAAMSKAMLKEPTH-YDADPALIQEDMEVMSDF 775
Query: 517 SIH 519
+H
Sbjct: 776 ELH 778
>sp|D3Z9Z9|SMRCD_RAT SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A containing DEAD/H box 1 OS=Rattus
norvegicus GN=Smarcad1 PE=3 SV=1
Length = 1024
Score = 221 bits (562), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 131/368 (35%), Positives = 203/368 (55%), Gaps = 49/368 (13%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
LKPYQ VG+N+L L+++ G+ G ILADEMGLGKTIQAI +L L N GPHLIV PA
Sbjct: 495 LKPYQKVGLNWLALVHKHGLNG-ILADEMGLGKTIQAIAFLAYLFQEGN-KGPHLIVVPA 552
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
S ++NW RE+ WCP+ +VL Y+G+ R+ +NV++ Y+ +
Sbjct: 553 STIDNWLREVNLWCPTLNVLCYYGSQE---ERKQIRFNIHNKYEDYNVIVTTYNC----A 605
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
+ DDR + +R + + + DE H LK+ S R+++LM++ NA RL+LTGTP+QN+L
Sbjct: 606 ISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTI--NARNRLLLTGTPVQNNLL 663
Query: 348 ELWSLLEFMMPDLFATEDVDLKKLLNGE----------DRDLIGRMKSILGPFILRRLKS 397
EL SLL F+MP +F++ +++++ + + +++ I K I+ PFILRR+K
Sbjct: 664 ELMSLLNFVMPHMFSSSTSEIRRMFSSKTKPADEQSIYEKERIAHAKQIIKPFILRRVKE 723
Query: 398 DVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQ 457
+V++ L PK +E M QE Y R+ K +I + +
Sbjct: 724 EVLKLLPPKKDQIELCAMSEKQEQLYSGLFN--------RLKK-------SINNLEKNTE 768
Query: 458 ISNYFVQFRKIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGF------ECTLERVIEELK 511
+ N +Q RK+ANHPLL R+ Y+ A+KL M E + + E+++
Sbjct: 769 MCNVMMQLRKMANHPLLHRQYYT-------AEKLKEMSQLMLKEPTHCEANPDLIFEDME 821
Query: 512 NYSDFSIH 519
+DF +H
Sbjct: 822 VMTDFELH 829
>sp|Q04692|SMRCD_MOUSE SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A containing DEAD/H box 1 OS=Mus
musculus GN=Smarcad1 PE=1 SV=2
Length = 1021
Score = 219 bits (558), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 129/362 (35%), Positives = 203/362 (56%), Gaps = 37/362 (10%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
LKPYQ VG+N+L L+++ G+ G ILADEMGLGKTIQAI +L L N GPHLIV PA
Sbjct: 492 LKPYQKVGLNWLALVHKHGLNG-ILADEMGLGKTIQAIAFLAYLFQEGN-KGPHLIVVPA 549
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
S ++NW RE+ WCPS +VL Y+G+ R+ +NV++ Y+ +
Sbjct: 550 STIDNWLREVNLWCPSLNVLCYYGSQE---ERKQIRFNIHNKYEDYNVIVTTYNC----A 602
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
+ DDR + +R + + + DE H LK+ S R+++LM++ NA RL+LTGTP+QN+L
Sbjct: 603 ISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTI--NARNRLLLTGTPVQNNLL 660
Query: 348 ELWSLLEFMMPDLFATEDVDLKKLLNGE----------DRDLIGRMKSILGPFILRRLKS 397
EL SLL F+MP +F++ +++++ + + +++ I K I+ PFILRR+K
Sbjct: 661 ELMSLLNFVMPHMFSSSTSEIRRMFSSKTKPADEQSIYEKERIAHAKQIIKPFILRRVKE 720
Query: 398 DVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQ 457
+V++ L PK +E M QE Y R+ K +I + +
Sbjct: 721 EVLKLLPPKKDRIELCAMSEKQEQLYSGLFN--------RLKK-------SINNLEKNTE 765
Query: 458 ISNYFVQFRKIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFECTLERVIEELKNYSDFS 517
+ N +Q RK+ANHPLL R+ Y+ + + + +L E + + E+++ +DF
Sbjct: 766 MCNVMMQLRKMANHPLLHRQYYTPEKLKEMS-QLMLKEPTHCEANPDLIFEDMEVMTDFE 824
Query: 518 IH 519
+H
Sbjct: 825 LH 826
>sp|Q9VL72|SMRCD_DROME SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A containing DEAD/H box 1 homolog
OS=Drosophila melanogaster GN=Etl1 PE=1 SV=1
Length = 844
Score = 219 bits (557), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 140/367 (38%), Positives = 206/367 (56%), Gaps = 38/367 (10%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L YQ++G+N+L +++++ + G ILADEMGLGKTIQ I +L LK HLIV P+
Sbjct: 289 LADYQIIGLNWLTVMHKQEMNG-ILADEMGLGKTIQVIAFLAYLKENGLSQAAHLIVVPS 347
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
S L+NWE E+ +WCP V +YHG+ + R AK G F+VLL Y +
Sbjct: 348 STLDNWEAEISRWCPELVVEKYHGS-QDERRRMRGRFAKDGF-TGFDVLLTTYHIVG--- 402
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
++RK+ + + V+ DEAH LK+ + R+ NL+++ NA R++LTGTPLQN+L
Sbjct: 403 -STPEERKMFRVCKLDYVIFDEAHMLKNMTTQRYANLITI--NARMRILLTGTPLQNNLL 459
Query: 348 ELWSLLEFMMPDLFATEDVDLKKLL------NGEDRDL-------IGRMKSILGPFILRR 394
EL SLL F+MP FA D+K L +G+ ++ I R K I+ PF+LRR
Sbjct: 460 ELISLLCFVMPKFFAKSIEDIKSLFAKKGKSDGDQDEVSQFQETQIQRAKRIMKPFVLRR 519
Query: 395 LKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLP 454
LK DV++ L K+ VE V M Q+ Y ++ Y S + S ++ A I
Sbjct: 520 LKKDVLKNLPKKLSLVEKVPMSSQQKIYYHELVDYY---SNNKGEVCSSSERAGIA---- 572
Query: 455 QRQISNYFVQFRKIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFECTLERVI-EELKNY 513
++ R+IANHPLL+R ++D ++ F+K+L A F+ T E+ I EEL
Sbjct: 573 ------IMMEMRRIANHPLLMRHYFTDANLRGFSKRL--ANASSFKKTNEQYIFEELAVM 624
Query: 514 SDFSIHQ 520
SDF ++Q
Sbjct: 625 SDFQVYQ 631
>sp|O74842|FFT2_SCHPO ATP-dependent helicase fft2 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=fft2 PE=1 SV=1
Length = 1284
Score = 211 bits (538), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 142/378 (37%), Positives = 214/378 (56%), Gaps = 40/378 (10%)
Query: 162 SDFQPVLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPH 221
SD Q LK YQLVGVN+L LLY++ ++G ILADEMGLGKT Q + + LL + GPH
Sbjct: 546 SDVQ--LKSYQLVGVNWLHLLYQQKLSG-ILADEMGLGKTCQVVAFFALLLEQGHH-GPH 601
Query: 222 LIVCPASVLENWERELKKWCPSFSVLQYHGAGRT-AYSRELSSLAKAGLPPPFNVLLVCY 280
L+V P+S LENW REL ++CPS V Y+G+ + A RE + +++L+ Y
Sbjct: 602 LVVVPSSTLENWLRELARFCPSLRVEPYYGSQQERANIREAIEENEIK----YDILVTTY 657
Query: 281 SLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGT 340
L + K+DR LK + + DE H LK++ S R+K+LM++ NAN RL+LTGT
Sbjct: 658 QL----ATNNKEDRSFLKHQNFDVCVYDEGHYLKNRMSERYKHLMNL--NANFRLLLTGT 711
Query: 341 PLQNDLHELWSLLEFMMPDLF--------------ATEDVDLKKLLNGEDRDLIGRMKSI 386
PLQN+L EL SLL F++P++F T D D+++ L + R I R K++
Sbjct: 712 PLQNNLKELVSLLAFILPNMFDSDMDDLDVIFKAKPTADADIEQALLSKQR--ISRAKTM 769
Query: 387 LGPFILRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYR--VAIEEYRAVSR-ARIAKLSD 443
+ PF+LRR K+ V+ L K Q +E+ + Q + Y A+++ + + R + K S
Sbjct: 770 MTPFVLRRRKNQVLNDLPKKTQIIEHCKLSENQLEIYNRYAALQKNQQLRRDDKRNKRSK 829
Query: 444 ADLATIVGVLPQRQISNYFVQFRKIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFECTL 503
D + L + +Q RK ANH LL R+ Y D+ + + AK + M ++
Sbjct: 830 NDEESDGKSLSAGHV---LMQLRKAANHALLFRKFYDDEKLKQMAKDI--MQEEQYKNAN 884
Query: 504 ERVI-EELKNYSDFSIHQ 520
E+ I E+++ SDF +H+
Sbjct: 885 EQYIYEDMEVMSDFELHR 902
>sp|P87114|FFT1_SCHPO ATP-dependent helicase fft1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=fft1 PE=3 SV=1
Length = 944
Score = 207 bits (527), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 133/368 (36%), Positives = 195/368 (52%), Gaps = 51/368 (13%)
Query: 167 VLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCP 226
LK YQ+VG+N+L L+Y+ ++G ILADEMGLGKT Q I++L LK HL+V P
Sbjct: 413 TLKSYQIVGLNWLCLMYKAKLSG-ILADEMGLGKTCQVISFLASLKE-KGIQNRHLVVVP 470
Query: 227 ASVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERH 286
+S L NW RE +K+CPS V Y G ++ + F+VL+ Y L
Sbjct: 471 SSTLGNWLREFEKFCPSLRVESYSGTQSERINKRY-----YLMDTDFDVLVTTYQL---- 521
Query: 287 SVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDL 346
+ +DDR L++ R+ + DE H LK++ S R+K+LM++ AN RL++TGTPLQN+L
Sbjct: 522 ASGSRDDRSFLRKQRFDISIFDEGHYLKNRMSERYKHLMNIP--ANFRLLITGTPLQNNL 579
Query: 347 HELWSLLEFMMPDLF--------------ATEDVDLKKLLNGEDRDLIGRMKSILGPFIL 392
EL SLL FM+P +F T D D+++ ++R I R K+I+ PFIL
Sbjct: 580 KELISLLAFMLPKVFDNNMQGLDIIYKIKTTSDGDIERAYLSQER--ISRAKTIMNPFIL 637
Query: 393 RRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGV 452
RR K +V+ L PKIQ VEY ME Q Y +E V+ R
Sbjct: 638 RRRKENVLSDLPPKIQHVEYCHMEETQLSLYLSVLELKNLVNANR--------------- 682
Query: 453 LPQRQISNYFVQFRKIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFECTLERVIEELKN 512
N +Q RK A H LL R Y+ + + +K++ A+ + + + E+++
Sbjct: 683 ------ENILMQLRKAALHQLLFRSQYNLETLSLMSKRILREDAY-LDANPQYIFEDMEV 735
Query: 513 YSDFSIHQ 520
SDF +H+
Sbjct: 736 MSDFELHK 743
>sp|Q24368|ISWI_DROME Chromatin-remodeling complex ATPase chain Iswi OS=Drosophila
melanogaster GN=Iswi PE=1 SV=1
Length = 1027
Score = 206 bits (523), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 113/313 (36%), Positives = 179/313 (57%), Gaps = 36/313 (11%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
++ YQ+ G+N+++ LY GI G ILADEMGLGKT+Q I+ L LKH N GPH+++ P
Sbjct: 128 MRDYQIRGLNWMISLYENGING-ILADEMGLGKTLQTISLLGYLKHFKNQAGPHIVIVPK 186
Query: 228 SVLENWERELKKWCPSFSVLQYHG--AGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFER 285
S L+NW E KKWCPS + G R + R++ +P ++V + Y + R
Sbjct: 187 STLQNWVNEFKKWCPSLRAVCLIGDQDTRNTFIRDVL------MPGEWDVCVTSYEMCIR 240
Query: 286 HSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
++ + K++ W +++DEAH +K++ S + ++ + AN RL++TGTPLQN+
Sbjct: 241 -------EKSVFKKFNWRYLVIDEAHRIKNEKS-KLSEILREFKTAN-RLLITGTPLQNN 291
Query: 346 LHELWSLLEFMMPDLFATEDVDLKKLLNGE----DRDLIGRMKSILGPFILRRLKSDVMQ 401
LHELW+LL F++PD+F + + D + N D LI R+ ++L PF+LRRLK++V +
Sbjct: 292 LHELWALLNFLLPDVFNSSE-DFDEWFNTNTCLGDDALITRLHAVLKPFLLRRLKAEVEK 350
Query: 402 QLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQISNY 461
+L PK + +V + + Q D Y + L D D+ G + + ++ N
Sbjct: 351 RLKPKKEMKIFVGLSKMQRDWYTKVL-------------LKDIDVVNGAGKVEKMRLQNI 397
Query: 462 FVQFRKIANHPLL 474
+Q RK NHP L
Sbjct: 398 LMQLRKCTNHPYL 410
>sp|P31380|FUN30_YEAST ATP-dependent helicase FUN30 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=FUN30 PE=1 SV=1
Length = 1131
Score = 202 bits (514), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 130/373 (34%), Positives = 200/373 (53%), Gaps = 38/373 (10%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
LK YQ G+N+L LLY+ ++ ILAD+MGLGKT Q I++ LK +N +PGPHL+V P+
Sbjct: 572 LKDYQQTGINWLNLLYQNKMS-CILADDMGLGKTCQVISFFAYLKQIN-EPGPHLVVVPS 629
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAK--AGLPPPFNVLLVCYSLFER 285
S LENW RE +K+ P+ + Y+G+ + EL + + AG ++V++ Y+L
Sbjct: 630 STLENWLREFQKFAPALKIEPYYGSLQE--REELRDILERNAG---KYDVIVTTYNL--- 681
Query: 286 HSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
+ K D LK ++ V+ DE H LK+ S R+ LM + AN RL+LTGTPLQN+
Sbjct: 682 -AAGNKYDVSFLKNRNFNVVVYDEGHMLKNSTSERFAKLMKI--RANFRLLLTGTPLQNN 738
Query: 346 LHELWSLLEFMMPDLFATE----DVDLKKLLNGED----------RDLIGRMKSILGPFI 391
L EL SLLEF+MP+LF ++ D K+ D ++ I R K+++ PFI
Sbjct: 739 LKELMSLLEFIMPNLFISKKESFDAIFKQRAKTTDDNKNHNPLLAQEAITRAKTMMKPFI 798
Query: 392 LRRLKSDVMQQLVPKIQWVEYVTMERPQEDAY----RVAIEEYRAVSRARIAKLSDADLA 447
LRR K V++ L PK ++Y + Q+ Y ++ +E R + + K A
Sbjct: 799 LRRRKDQVLKHLPPKHTHIQYCELNAIQKKIYDKEIQIVLEHKRMIKDGELPK-----DA 853
Query: 448 TIVGVLPQRQISNYFVQFRKIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFECTLERVI 507
L N + RK + HPLL R IY+D + + + + A+ E +
Sbjct: 854 KEKSKLQSSSSKNLIMALRKASLHPLLFRNIYNDKIITKMSDAILDEPAYAENGNKEYIK 913
Query: 508 EELKNYSDFSIHQ 520
E++ +DF +H+
Sbjct: 914 EDMSYMTDFELHK 926
>sp|P28370|SMCA1_HUMAN Probable global transcription activator SNF2L1 OS=Homo sapiens
GN=SMARCA1 PE=1 SV=2
Length = 1054
Score = 202 bits (514), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 114/316 (36%), Positives = 177/316 (56%), Gaps = 42/316 (13%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQ+ G+N+L+ LY G+ G ILADEMGLGKT+Q I L LKH N PGPH+++ P
Sbjct: 183 LRDYQIRGLNWLISLYENGVNG-ILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPK 241
Query: 228 SVLENWERELKKWCPSFSVLQYHG--AGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFER 285
S L NW E K+W PS V+ + G R A+ R+ +P ++V + Y + +
Sbjct: 242 STLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRD------EMMPGEWDVCVTSYEMVIK 295
Query: 286 HSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVAR--NANQRLMLTGTPLQ 343
++ + K++ W +++DEAH +K++ S L + R + RL+LTGTPLQ
Sbjct: 296 -------EKSVFKKFHWRYLVIDEAHRIKNEKS----KLSEIVREFKSTNRLLLTGTPLQ 344
Query: 344 NDLHELWSLLEFMMPDLFATED-----VDLKKLLNGEDRDLIGRMKSILGPFILRRLKSD 398
N+LHELW+LL F++PD+F + D D K L D+ L+ R+ ++L PF+LRR+K+D
Sbjct: 345 NNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLG--DQKLVERLHAVLKPFLLRRIKTD 402
Query: 399 VMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQI 458
V + L PK + Y+ + + Q + Y + + D D+ G + + ++
Sbjct: 403 VEKSLPPKKEIKIYLGLSKMQREWYTKIL-------------MKDIDVLNSSGKMDKMRL 449
Query: 459 SNYFVQFRKIANHPLL 474
N +Q RK NHP L
Sbjct: 450 LNILMQLRKCCNHPYL 465
>sp|Q6PGB8|SMCA1_MOUSE Probable global transcription activator SNF2L1 OS=Mus musculus
GN=Smarca1 PE=1 SV=1
Length = 1046
Score = 202 bits (513), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 114/316 (36%), Positives = 177/316 (56%), Gaps = 42/316 (13%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQ+ G+N+L+ LY G+ G ILADEMGLGKT+Q I L LKH N PGPH+++ P
Sbjct: 187 LRDYQIRGLNWLISLYENGVNG-ILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPK 245
Query: 228 SVLENWERELKKWCPSFSVLQYHGAG--RTAYSRELSSLAKAGLPPPFNVLLVCYSLFER 285
S L NW E K+W PS V+ + G R A+ R+ +P ++V + Y + +
Sbjct: 246 STLHNWMNEFKRWVPSLRVICFVGDKDVRAAFIRD------EMMPGEWDVCVTSYEMVIK 299
Query: 286 HSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVAR--NANQRLMLTGTPLQ 343
++ + K++ W +++DEAH +K++ S L + R + RL+LTGTPLQ
Sbjct: 300 -------EKSVFKKFHWRYLVIDEAHRIKNEKS----KLSEIVREFKSTNRLLLTGTPLQ 348
Query: 344 NDLHELWSLLEFMMPDLFATED-----VDLKKLLNGEDRDLIGRMKSILGPFILRRLKSD 398
N+LHELW+LL F++PD+F + D D K L D+ L+ R+ ++L PF+LRR+K+D
Sbjct: 349 NNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLG--DQKLVERLHAVLKPFLLRRIKTD 406
Query: 399 VMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQI 458
V + L PK + Y+ + + Q + Y + + D D+ G + + ++
Sbjct: 407 VEKSLPPKKEIKIYLGLSKMQREWYTKIL-------------MKDIDVLNSSGKMDKMRL 453
Query: 459 SNYFVQFRKIANHPLL 474
N +Q RK NHP L
Sbjct: 454 LNILMQLRKCCNHPYL 469
>sp|P41877|ISW1_CAEEL Chromatin-remodeling complex ATPase chain isw-1 OS=Caenorhabditis
elegans GN=isw-1 PE=1 SV=2
Length = 1009
Score = 201 bits (510), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 111/313 (35%), Positives = 171/313 (54%), Gaps = 36/313 (11%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
++ YQ+ G+N+L L I G ILADEMGLGKT+Q I+ + +KH N PHL++ P
Sbjct: 132 MRDYQVRGLNWLASLQHNKING-ILADEMGLGKTLQTISMIGYMKHYKNKASPHLVIVPK 190
Query: 228 SVLENWERELKKWCPSFSVLQYHG--AGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFER 285
S L+NW E KKWCPS + + G A R R++ LP F+V Y + +
Sbjct: 191 STLQNWANEFKKWCPSINAVVLIGDEAARNQVLRDVI------LPQKFDVCCTTYEMMLK 244
Query: 286 HSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
Q LK+ W +++DEAH +K++ S + + + N+ RL++TGTPLQN+
Sbjct: 245 VKTQ-------LKKLNWRYIIIDEAHRIKNEKSKLSETVREL--NSENRLLITGTPLQNN 295
Query: 346 LHELWSLLEFMMPDLFATEDVDLKKLLNGE----DRDLIGRMKSILGPFILRRLKSDVMQ 401
LHELW+LL F++PD+F + D D + + + DL+ R+ +L PF+LRR+KSDV +
Sbjct: 296 LHELWALLNFLLPDIFTSSD-DFDSWFSNDAMSGNTDLVQRLHKVLQPFLLRRIKSDVEK 354
Query: 402 QLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQISNY 461
L+PK + YV + + Q + Y + + D D+ G + + ++ N
Sbjct: 355 SLLPKKEVKVYVGLSKMQREWYTKVL-------------MKDIDIINGAGKVEKARLMNI 401
Query: 462 FVQFRKIANHPLL 474
+ RK NHP L
Sbjct: 402 LMHLRKCVNHPYL 414
>sp|Q91ZW3|SMCA5_MOUSE SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 OS=Mus musculus
GN=Smarca5 PE=1 SV=1
Length = 1051
Score = 199 bits (506), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 117/316 (37%), Positives = 175/316 (55%), Gaps = 42/316 (13%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQ+ G+N+L+ LY GI G ILADEMGLGKT+Q I+ L +KH N PGPH+++ P
Sbjct: 179 LRDYQVRGLNWLISLYENGING-ILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPK 237
Query: 228 SVLENWERELKKWCPSFSVLQYHG--AGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFER 285
S L NW E KKW P+ + G R A+ R++ LP ++V + Y + +
Sbjct: 238 STLHNWMSEFKKWVPTLRSVCLIGDKEQRAAFVRDVL------LPGEWDVCVTSYEMLIK 291
Query: 286 HSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVAR--NANQRLMLTGTPLQ 343
++ + K++ W +++DEAH +K++ S L + R RL+LTGTPLQ
Sbjct: 292 -------EKSVFKKFNWRYLVIDEAHRIKNEKS----KLSEIVREFKTTNRLLLTGTPLQ 340
Query: 344 NDLHELWSLLEFMMPDLFATED-----VDLKKLLNGEDRDLIGRMKSILGPFILRRLKSD 398
N+LHELWSLL F++PD+F + D D L D+ L+ R+ +L PF+LRR+K+D
Sbjct: 341 NNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLG--DQKLVERLHMVLRPFLLRRIKAD 398
Query: 399 VMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQI 458
V + L PK + YV + + Q + Y RI + D D+ G + + ++
Sbjct: 399 VEKSLPPKKEVKIYVGLSKMQREWY------------TRIL-MKDIDILNSAGKMDKMRL 445
Query: 459 SNYFVQFRKIANHPLL 474
N +Q RK NHP L
Sbjct: 446 LNILMQLRKCCNHPYL 461
>sp|O60264|SMCA5_HUMAN SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 OS=Homo sapiens
GN=SMARCA5 PE=1 SV=1
Length = 1052
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 116/316 (36%), Positives = 175/316 (55%), Gaps = 42/316 (13%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQ+ G+N+L+ LY GI G ILADEMGLGKT+Q I+ L +KH N PGPH+++ P
Sbjct: 180 LRDYQVRGLNWLISLYENGING-ILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPK 238
Query: 228 SVLENWERELKKWCPSFSVLQYHG--AGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFER 285
S L NW E K+W P+ + G R A+ R++ LP ++V + Y + +
Sbjct: 239 STLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVL------LPGEWDVCVTSYEMLIK 292
Query: 286 HSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVAR--NANQRLMLTGTPLQ 343
++ + K++ W +++DEAH +K++ S L + R RL+LTGTPLQ
Sbjct: 293 -------EKSVFKKFNWRYLVIDEAHRIKNEKS----KLSEIVREFKTTNRLLLTGTPLQ 341
Query: 344 NDLHELWSLLEFMMPDLFATED-----VDLKKLLNGEDRDLIGRMKSILGPFILRRLKSD 398
N+LHELWSLL F++PD+F + D D L D+ L+ R+ +L PF+LRR+K+D
Sbjct: 342 NNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLG--DQKLVERLHMVLRPFLLRRIKAD 399
Query: 399 VMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQI 458
V + L PK + YV + + Q + Y RI + D D+ G + + ++
Sbjct: 400 VEKSLPPKKEVKIYVGLSKMQREWY------------TRIL-MKDIDILNSAGKMDKMRL 446
Query: 459 SNYFVQFRKIANHPLL 474
N +Q RK NHP L
Sbjct: 447 LNILMQLRKCCNHPYL 462
>sp|Q7G8Y3|ISW2_ORYSJ Probable chromatin-remodeling complex ATPase chain OS=Oryza sativa
subsp. japonica GN=Os01g0367900 PE=2 SV=2
Length = 1107
Score = 195 bits (496), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 115/312 (36%), Positives = 182/312 (58%), Gaps = 32/312 (10%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
++ YQL G+N+L+ LY GI G ILADEMGLGKT+Q I+ L L GPH++V P
Sbjct: 231 MRDYQLAGLNWLIRLYENGING-ILADEMGLGKTLQTISLLGYLHEFRGITGPHMVVAPK 289
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
S L NW +E++++CP +++ G E + + + L P VC + FE +
Sbjct: 290 STLGNWIKEIQRFCPILRAVKFLGN-----PEERNHIRENLLQP--GKFDVCVTSFE-MA 341
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
+++K LKR+ W +++DEAH +K++NS K + N N RL++TGTPLQN+LH
Sbjct: 342 IKEK---TTLKRFSWRYIIIDEAHRIKNENSLLSKTMRIY--NTNYRLLITGTPLQNNLH 396
Query: 348 ELWSLLEFMMPDLFAT-EDVDLKKLLNGED--RDLIGRMKSILGPFILRRLKSDVMQQLV 404
ELWSLL F++P++F++ E D ++GE+ ++++ ++ +L PF+LRRLKSDV + L
Sbjct: 397 ELWSLLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLP 456
Query: 405 PKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQISNYFVQ 464
PK + + V M + Q+ YR +++ DL I ++++ N +Q
Sbjct: 457 PKKETILKVGMSQMQKQYYRALLQK---------------DLEVINAGGERKRLLNIAMQ 501
Query: 465 FRKIANHPLLVR 476
RK NHP L +
Sbjct: 502 LRKCCNHPYLFQ 513
>sp|P0CO16|INO80_CRYNJ Putative DNA helicase INO80 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=INO80 PE=3 SV=1
Length = 1765
Score = 195 bits (495), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 123/332 (37%), Positives = 186/332 (56%), Gaps = 44/332 (13%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
LK YQL G+ +L LY +GI G ILADEMGLGKTIQ+I+ L L +N GP L++ PA
Sbjct: 871 LKEYQLKGLTWLGNLYEQGING-ILADEMGLGKTIQSISLLAYLAEHHNLWGPFLVIAPA 929
Query: 228 SVLENWERELKKWCPSFSVLQYHGAG------RTAYSRELSSLAKAGLPPPFNVLLVCYS 281
S L NW++EL ++ P L Y G+ R +SR+ + ++ PF++L+ Y
Sbjct: 930 STLHNWQQELARFVPRLKALPYWGSPKDRETLRKIWSRKNQTFSEDS---PFHILITSYQ 986
Query: 282 LFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTP 341
L +VQ D K L+ +W +++DEA A+K +S RWK+L+S+ + RL+LTGTP
Sbjct: 987 L----AVQ---DEKYLQGMKWQYMILDEAQAIKSSSSARWKSLLSL--HCRNRLLLTGTP 1037
Query: 342 LQNDLHELWSLLEFMMPDLFATED-------VDLKKLLNGEDRDL----IGRMKSILGPF 390
+QN +HELW+LL F+MP LF + + D++ G +L + R+ IL PF
Sbjct: 1038 IQNSMHELWALLHFIMPQLFDSHEEFAEWFSKDIESSSGGVTGNLKPEQLKRLHMILKPF 1097
Query: 391 ILRRLKSDVMQQLVPKIQWVEYVTMERPQEDAY-----RVAIEEYRAVSRARIAKLSDAD 445
+LRR+K V ++L KI+ V + + Q + Y RV+I + A + + +
Sbjct: 1098 MLRRVKKHVQKELGDKIEIDLLVDLSQRQREIYKALRQRVSITDLLATAENNTDNGNPKN 1157
Query: 446 LATIVGVLPQRQISNYFVQFRKIANHPLLVRR 477
+ ++V N +QFRK+ NHP L R
Sbjct: 1158 MRSLV---------NLVMQFRKVCNHPDLFER 1180
>sp|P0CO17|INO80_CRYNB Putative DNA helicase INO80 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=INO80 PE=3 SV=1
Length = 1765
Score = 195 bits (495), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 123/332 (37%), Positives = 186/332 (56%), Gaps = 44/332 (13%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
LK YQL G+ +L LY +GI G ILADEMGLGKTIQ+I+ L L +N GP L++ PA
Sbjct: 871 LKEYQLKGLTWLGNLYEQGING-ILADEMGLGKTIQSISLLAYLAEHHNLWGPFLVIAPA 929
Query: 228 SVLENWERELKKWCPSFSVLQYHGAG------RTAYSRELSSLAKAGLPPPFNVLLVCYS 281
S L NW++EL ++ P L Y G+ R +SR+ + ++ PF++L+ Y
Sbjct: 930 STLHNWQQELARFVPRLKALPYWGSPKDRETLRKIWSRKNQTFSEDS---PFHILITSYQ 986
Query: 282 LFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTP 341
L +VQ D K L+ +W +++DEA A+K +S RWK+L+S+ + RL+LTGTP
Sbjct: 987 L----AVQ---DEKYLQGMKWQYMILDEAQAIKSSSSARWKSLLSL--HCRNRLLLTGTP 1037
Query: 342 LQNDLHELWSLLEFMMPDLFATED-------VDLKKLLNGEDRDL----IGRMKSILGPF 390
+QN +HELW+LL F+MP LF + + D++ G +L + R+ IL PF
Sbjct: 1038 IQNSMHELWALLHFIMPQLFDSHEEFAEWFSKDIESSSGGVTGNLKPEQLKRLHMILKPF 1097
Query: 391 ILRRLKSDVMQQLVPKIQWVEYVTMERPQEDAY-----RVAIEEYRAVSRARIAKLSDAD 445
+LRR+K V ++L KI+ V + + Q + Y RV+I + A + + +
Sbjct: 1098 MLRRVKKHVQKELGDKIEIDLLVDLSQRQREIYKALRQRVSITDLLATAENNTDNGNPKN 1157
Query: 446 LATIVGVLPQRQISNYFVQFRKIANHPLLVRR 477
+ ++V N +QFRK+ NHP L R
Sbjct: 1158 MRSLV---------NLVMQFRKVCNHPDLFER 1180
>sp|Q4PGL2|INO80_USTMA Putative DNA helicase INO80 OS=Ustilago maydis (strain 521 / FGSC
9021) GN=INO80 PE=3 SV=1
Length = 1910
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 131/382 (34%), Positives = 192/382 (50%), Gaps = 60/382 (15%)
Query: 132 AACDRYAEVEASSVRIVTQSDIDDACGDEDSDF------------QP-----VLKPYQLV 174
AA ++A V+ + + D+ A +D +F QP LK YQL
Sbjct: 945 AAAREREGLDAGPVKQIEEKDLGKAFDSDDMNFLNPTSMGQTEIKQPKMLTCQLKEYQLK 1004
Query: 175 GVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPASVLENWE 234
G+N+L LY +GI G ILADEMGLGKT+Q+I+ + L +++ GP L++ PAS L NW+
Sbjct: 1005 GLNWLANLYEQGING-ILADEMGLGKTVQSISLMAYLAEVHDIWGPFLVIAPASTLHNWQ 1063
Query: 235 RELKKWCPSFSVLQYHG------AGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHSV 288
+E+ K+ P+ L Y G R ++R+ S + PF+VL+ Y L
Sbjct: 1064 QEISKFVPTLKALPYWGNVKDRAVLRKFWNRKQISYNRDA---PFHVLVTSYQLV----- 1115
Query: 289 QQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHE 348
D K +R +W +++DEA A+K +S RWK L+ N RL+LTGTP+QN + E
Sbjct: 1116 --VSDEKYFQRVKWQYMILDEAQAIKSSSSIRWKTLLGF--NCRNRLLLTGTPVQNSMQE 1171
Query: 349 LWSLLEFMMPDLFATED-------------VDLKKLLNGEDRDLIGRMKSILGPFILRRL 395
LW+LL F+MP LF + D + K LN + R+ IL PF+LRR+
Sbjct: 1172 LWALLHFIMPSLFDSHDEFSEWFSKDIESHAEQKGTLNEHQ---LRRLHMILKPFMLRRI 1228
Query: 396 KSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQ 455
K +V +L KI+ + + Q+ YR RA I+ D AT
Sbjct: 1229 KKNVQNELGDKIEIDVFCDLSARQKMLYRGL--------RANISVAELMDRATSNDEAGL 1280
Query: 456 RQISNYFVQFRKIANHPLLVRR 477
+ + N +QFRK+ NHP L R
Sbjct: 1281 KSLMNLVMQFRKVCNHPELFER 1302
>sp|Q9NEL2|SSL1_CAEEL Helicase ssl-1 OS=Caenorhabditis elegans GN=ssl-1 PE=2 SV=4
Length = 2395
Score = 194 bits (493), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 118/317 (37%), Positives = 180/317 (56%), Gaps = 38/317 (11%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQ+VG+++++ LY K + G ILADEMGLGKTIQ I+ L + + GPHLIV P
Sbjct: 558 LREYQMVGLDWMVTLYEKNLNG-ILADEMGLGKTIQTISLLAHMACSESIWGPHLIVVPT 616
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
SV+ NWE E KKWCP+ +L Y G ++E + K + P N VC + ++ +
Sbjct: 617 SVILNWEMEFKKWCPALKILTYFGT-----AKERAEKRKGWMKP--NCFHVCITSYK--T 667
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 347
V Q D + K+ W +++DEA +K+ S RW+ L++V A +RL+LTGTPLQN L
Sbjct: 668 VTQ--DIRAFKQRAWQYLILDEAQNIKNWKSQRWQALLNV--RARRRLLLTGTPLQNSLM 723
Query: 348 ELWSLLEFMMPDLFATED-------VDLKKLLNGE---DRDLIGRMKSILGPFILRRLKS 397
ELWSL+ F+MP +F++ D L ++ G + LIGR+ +L PFILRRLK
Sbjct: 724 ELWSLMHFLMPTIFSSHDDFKDWFSNPLTGMMEGNMEFNAPLIGRLHKVLRPFILRRLKK 783
Query: 398 DVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQ 457
+V +QL K + + ++ + Q Y +++ + R+ L ++ +++
Sbjct: 784 EVEKQLPEKTEHIVNCSLSKRQRYLY----DDFMS-RRSTKENLKSGNMMSVL------- 831
Query: 458 ISNYFVQFRKIANHPLL 474
N +Q RK NHP L
Sbjct: 832 --NIVMQLRKCCNHPNL 846
>sp|O42861|FFT3_SCHPO ATP-dependent helicase fft3 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=fft3 PE=1 SV=1
Length = 922
Score = 194 bits (493), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 143/445 (32%), Positives = 231/445 (51%), Gaps = 57/445 (12%)
Query: 108 VEAL-QKCAKISAELKR--ELYGTTTSAACDRYAEVEASSVRIVTQSDIDDACGDE---- 160
V+AL ++C ++ +++R E +G + +A D E E S V
Sbjct: 320 VDALIRQCEQLGGKIQRGIEAWGLSNTATSD---EGETSLVNFDQMKSFGTPANSSFITT 376
Query: 161 -DSDFQPVLK--PYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLL--KHLN 215
+ F P +K YQ++G+N+L LLY +AG ILADEMGLGKT Q I + LL K++N
Sbjct: 377 PPASFSPDIKLQDYQIIGINWLYLLYELKLAG-ILADEMGLGKTCQTIAFFSLLMDKNIN 435
Query: 216 NDPGPHLIVCPASVLENWERELKKWCPSFSVLQYHGAG--RTAYSRELSSLAKAGLPPPF 273
GPHL++ PAS +ENW RE K+CP + Y+G+ R ++S + +
Sbjct: 436 ---GPHLVIAPASTMENWLREFAKFCPKLKIELYYGSQVEREEIRERINSNKDS-----Y 487
Query: 274 NVLLVCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQ 333
NV+L Y R + K DR L+ +++ + DE H LK++ S R+++LMS+ A+
Sbjct: 488 NVMLTTY----RLAATSKADRLFLRNQKFNVCVYDEGHYLKNRASERYRHLMSIP--ADF 541
Query: 334 RLMLTGTPLQNDLHELWSLLEFMMPDLF--------------ATEDVDLKKLLNGEDRDL 379
R++LTGTPLQN+L EL SLL F++P +F + + D ++ L E R
Sbjct: 542 RVLLTGTPLQNNLKELISLLAFILPHVFDYGLKSLDVIFTMKKSPESDFERALLSEQR-- 599
Query: 380 IGRMKSILGPFILRRLKSDVMQQLVPK---IQWVEYVTMERPQEDAYRVAIEEYRAVSRA 436
+ R K ++ PF+LRR KS V+ L K I++ E+ ER + D + ++V+
Sbjct: 600 VSRAKMMMAPFVLRRKKSQVLDALPKKTRIIEFCEFSEEERRRYDDF----ASKQSVNSL 655
Query: 437 RIAKLSDADLATIVGVLPQRQISNY-FVQFRKIANHPLLVRRIYSDDDVVRFAKKLHPMG 495
+ +L T + ++ + + VQ RK+A+HP+L R Y DD + + AK +
Sbjct: 656 LDENVMKTNLDTNANLAKKKSTAGFVLVQLRKLADHPMLFRIHYKDDILRQMAKAIMNEP 715
Query: 496 AFGFECTLERVIEELKNYSDFSIHQ 520
+ L + E+++ SD +H
Sbjct: 716 QYKKANEL-YIFEDMQYMSDIELHN 739
>sp|Q6FV37|INO80_CANGA Putative DNA helicase INO80 OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=INO80 PE=3
SV=1
Length = 1484
Score = 193 bits (491), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 122/331 (36%), Positives = 179/331 (54%), Gaps = 38/331 (11%)
Query: 167 VLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCP 226
LK YQL G+N+L LY +GI G ILADEMGLGKT+Q+I+ L L +N GP L+V P
Sbjct: 721 TLKEYQLKGLNWLANLYDQGING-ILADEMGLGKTVQSISVLAHLAEHHNIWGPFLVVTP 779
Query: 227 ASVLENWERELKKWCPSFSVLQYHGAG------RTAYSRELSSLAKAGLPPPFNVLLVCY 280
AS L NW E+ K+ P F +L Y G+ R + R+ ++ PF+V++ Y
Sbjct: 780 ASTLHNWVNEISKFVPQFKILPYWGSANDRKVLRKFWDRKNLRYSEKS---PFHVMITSY 836
Query: 281 SLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGT 340
+ D L++ +W +++DEA A+K S RWKNL+S + RL+LTGT
Sbjct: 837 QMVVA-------DASYLQKMKWQYMILDEAQAIKSSQSSRWKNLLSF--HCRNRLLLTGT 887
Query: 341 PLQNDLHELWSLLEFMMPDLFATED-------VDLKKLLNGE---DRDLIGRMKSILGPF 390
P+QN++ ELW+LL F+MP LF + D D++ G ++ + R+ IL PF
Sbjct: 888 PIQNNMQELWALLHFIMPSLFDSHDEFNEWFSRDIESHAEGNSSLNQQQLRRLHMILKPF 947
Query: 391 ILRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEE----YRAVSRARIAKLSDADL 446
+LRR+K +V +L KI+ + + Q Y+V + Y A+ A +D+
Sbjct: 948 MLRRIKKNVQSELGDKIEIDVMCDLTQRQTKLYQVLKSQMSSNYDAIEN---AAAEGSDI 1004
Query: 447 ATIVGVLPQRQISNYFVQFRKIANHPLLVRR 477
A G + I N +QFRK+ NHP L R
Sbjct: 1005 AG--GGNSDQSIINAVMQFRKVCNHPDLFER 1033
>sp|Q08773|ISW2_YEAST ISWI chromatin-remodeling complex ATPase ISW2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ISW2 PE=1
SV=1
Length = 1120
Score = 192 bits (488), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 116/317 (36%), Positives = 178/317 (56%), Gaps = 41/317 (12%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQ+ G+N+L+ L+ ++G ILADEMGLGKT+Q I++L L+++ GP LI+ P
Sbjct: 184 LRDYQVQGLNWLISLHENKLSG-ILADEMGLGKTLQTISFLGYLRYVKQIEGPFLIIVPK 242
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERHS 287
S L+NW RE KW P+ +VL HG T + L F+VL+ Y + R
Sbjct: 243 STLDNWRREFLKWTPNVNVLVLHGDKDT----RADIVRNIILEARFDVLITSYEMVIR-- 296
Query: 288 VQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVAR--NANQRLMLTGTPLQND 345
++ LKR W +++DEAH +K++ S L + R + RL++TGTPLQN+
Sbjct: 297 -----EKNALKRLAWQYIVIDEAHRIKNEQSA----LSQIIRLFYSKNRLLITGTPLQNN 347
Query: 346 LHELWSLLEFMMPDLFA-TEDVDLKKLLNGEDRD---LIGRMKSILGPFILRRLKSDVMQ 401
LHELW+LL F++PD+F +E D N ++D +I ++ S+L PF+LRR+K+DV +
Sbjct: 348 LHELWALLNFLLPDIFGDSELFDEWFEQNNSEQDQEIVIQQLHSVLNPFLLRRVKADVEK 407
Query: 402 QLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQ---- 457
L+PKI+ YV M Q Y+ +E+ D+ + G + +R+
Sbjct: 408 SLLPKIETNVYVGMTDMQIQWYKSLLEK---------------DIDAVNGAVGKREGKTR 452
Query: 458 ISNYFVQFRKIANHPLL 474
+ N +Q RK NHP L
Sbjct: 453 LLNIVMQLRKCCNHPYL 469
>sp|Q0UG82|INO80_PHANO Putative DNA helicase INO80 OS=Phaeosphaeria nodorum (strain SN15 /
ATCC MYA-4574 / FGSC 10173) GN=INO80 PE=3 SV=2
Length = 1673
Score = 192 bits (488), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 127/370 (34%), Positives = 197/370 (53%), Gaps = 44/370 (11%)
Query: 167 VLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCP 226
LK YQL G+N+L+ LY +GI G ILADEMGLGKT+Q+I+ + L N GP L++ P
Sbjct: 820 TLKEYQLKGLNWLVNLYEQGING-ILADEMGLGKTVQSISVMAYLAERYNIWGPFLVIAP 878
Query: 227 ASVLENWERELKKWCPSFSVLQYHGAG------RTAYSRELSSLAKAGLPPPFNVLLVCY 280
AS L NW++E+ K+ P +V+ Y G R + R+ + + PF+V++ Y
Sbjct: 879 ASTLHNWQQEIAKFVPDLNVIPYWGTAKDRKVLRKLWDRKHVTYTRDS---PFHVVVSSY 935
Query: 281 SLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGT 340
L VQ D + ++ RW +++DEA A+K NS RWK+L++ ++ RL+LTGT
Sbjct: 936 QLV----VQ---DAQYFQKMRWQYMILDEAQAIKSSNSSRWKSLLNF--HSRNRLLLTGT 986
Query: 341 PLQNDLHELWSLLEFMMPDLFA---------TEDVDLKKLLNGE-DRDLIGRMKSILGPF 390
P+QN++ ELW+LL F+MP LF ++D++ N + + D + R+ IL PF
Sbjct: 987 PIQNNMQELWALLHFIMPSLFDSHDEFSEWFSKDIESHAQSNTKLNEDQLRRLHMILKPF 1046
Query: 391 ILRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIV 450
+LRR+K V ++L KI+ Y + Q Y + + A + D AT++
Sbjct: 1047 MLRRVKKHVQKELGDKIELDVYCDLTYRQRAYYANLRNKISIMDLIEKAVGDEQDSATLM 1106
Query: 451 GVLPQRQISNYFVQFRKIANHPLLVRR--IYSDDDVVRFAKKLHPMGAFGFECTLERVIE 508
N +QFRK+ NHP L R +S FA+ +F E RV
Sbjct: 1107 ---------NLVMQFRKVCNHPDLFERADTWSPFTFASFAE----TPSFLREGQNVRVAY 1153
Query: 509 ELKNYSDFSI 518
+N+ ++S+
Sbjct: 1154 TTRNFIEYSL 1163
>sp|P38144|ISW1_YEAST ISWI chromatin-remodeling complex ATPase ISW1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ISW1 PE=1
SV=2
Length = 1129
Score = 192 bits (487), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 122/337 (36%), Positives = 186/337 (55%), Gaps = 44/337 (13%)
Query: 154 DDACGDEDSDFQ----PV-----LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQA 204
+D+ DE +FQ P L+PYQ+ GVN+L+ L++ IAG ILADEMGLGKT+Q
Sbjct: 173 EDSDDDESIEFQFRESPAYVNGQLRPYQIQGVNWLVSLHKNKIAG-ILADEMGLGKTLQT 231
Query: 205 ITYLMLLKHLNNDPGPHLIVCPASVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSL 264
I++L L+++ PGP L++ P S L NW RE+ +W P + G +
Sbjct: 232 ISFLGYLRYIEKIPGPFLVIAPKSTLNNWLREINRWTPDVNAFILQGDK----EERAELI 287
Query: 265 AKAGLPPPFNVLLVCYSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNL 324
K L F+V++ Y + R ++ LK+ W +++DEAH +K++ S L
Sbjct: 288 QKKLLGCDFDVVIASYEIIIR-------EKSPLKKINWEYIIIDEAHRIKNEESM----L 336
Query: 325 MSVAR--NANQRLMLTGTPLQNDLHELWSLLEFMMPDLFA-TEDVD--LKKLLNGEDRD- 378
V R + RL++TGTPLQN+LHELW+LL F++PD+F+ +D D ED+D
Sbjct: 337 SQVLREFTSRNRLLITGTPLQNNLHELWALLNFLLPDIFSDAQDFDDWFSSESTEEDQDK 396
Query: 379 LIGRMKSILGPFILRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIE-EYRAVSRAR 437
++ ++ ++L PF+LRR+KSDV L+PK + YV M Q+ Y+ +E + AV+ +
Sbjct: 397 IVKQLHTVLQPFLLRRIKSDVETSLLPKKELNLYVGMSSMQKKWYKKILEKDLDAVNGSN 456
Query: 438 IAKLSDADLATIVGVLPQRQISNYFVQFRKIANHPLL 474
+K S L I+ +Q RK NHP L
Sbjct: 457 GSKESKTRLLNIM------------MQLRKCCNHPYL 481
>sp|Q872I5|INO80_NEUCR Putative DNA helicase ino-80 OS=Neurospora crassa (strain ATCC 24698
/ 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=ino-80 PE=3 SV=3
Length = 1997
Score = 191 bits (486), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 117/326 (35%), Positives = 175/326 (53%), Gaps = 38/326 (11%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
LK YQL G+N+L+ LY +GI G ILADEMGLGKT+Q+I+ + L + GP L+V PA
Sbjct: 1118 LKEYQLKGLNWLVNLYEQGING-ILADEMGLGKTVQSISVMAYLAEKYDIWGPFLVVAPA 1176
Query: 228 SVLENWERELKKWCPSFSVLQYHGAG------RTAYSRELSSLAKAGLPPPFNVLLVCYS 281
S L NW++E+ K+ P F VL Y G R + R+ ++ K PF+V++ Y
Sbjct: 1177 STLHNWQQEITKFVPQFKVLPYWGTAGDRKVLRKFWDRKHTTYKKDA---PFHVMITSYQ 1233
Query: 282 LFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTP 341
L D ++ +W +++DEA A+K S RWK L+ + RL+LTGTP
Sbjct: 1234 LV-------VSDVAYFQKMKWQYMILDEAQAIKSSQSSRWKCLLGF--HCRNRLLLTGTP 1284
Query: 342 LQNDLHELWSLLEFMMPDLFA---------TEDVDLKKLLNGE-DRDLIGRMKSILGPFI 391
+QN++ ELW+LL F+MP LF ++D++ N + + D + R+ IL PF+
Sbjct: 1285 IQNNMQELWALLHFIMPSLFDSHDEFSEWFSKDIESHAQSNTKLNEDQLKRLHMILKPFM 1344
Query: 392 LRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVG 451
LRR+K V ++L KI+ + + Q Y + + A L D D A+++
Sbjct: 1345 LRRVKKHVQKELGDKIEMDVFCDLTYRQRAMYANLRNQISIMDLIEKATLGDDDSASLM- 1403
Query: 452 VLPQRQISNYFVQFRKIANHPLLVRR 477
N +QFRK+ NHP L R
Sbjct: 1404 --------NLVMQFRKVCNHPDLFER 1421
>sp|Q6BGY8|INO80_DEBHA Putative DNA helicase INO80 OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=INO80 PE=3 SV=2
Length = 1364
Score = 191 bits (486), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 127/389 (32%), Positives = 199/389 (51%), Gaps = 42/389 (10%)
Query: 109 EALQKCAKISAELKRELYGTTTSAACD---RYAEVEASSVRIVTQSDIDDACGDEDSDFQ 165
E+L K A ++A++ E T A + + + + + + D + +
Sbjct: 505 ESLNKAAAVNAQIALEAAKTKAQAFDNDPLKNPDTNGEEMNFQNPTLLGDINISQPDLLK 564
Query: 166 PVLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVC 225
LK YQ+ G+N+L LY +GI G ILADEMGLGKT+Q+I+ L L +N GP L+V
Sbjct: 565 CTLKEYQVKGLNWLANLYEQGING-ILADEMGLGKTVQSISVLAYLAETHNIWGPFLVVT 623
Query: 226 PASVLENWERELKKWCPSFSVLQYHGAG------RTAYSRELSSLAKAGLPPPFNVLLVC 279
PAS L NW++E+ ++ P F V+ Y G R + R+ + G PF+VL+
Sbjct: 624 PASTLHNWQQEISRFVPEFKVIPYWGNAKDRKVLRKFWDRK---NFRYGKDAPFHVLVTS 680
Query: 280 YSLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVA-RNANQRLMLT 338
Y L D ++ +W +++DEA A+K S RWK+L+S + RN RL+LT
Sbjct: 681 YQLVVA-------DAAYFQKMKWQYMILDEAQAIKSSQSSRWKSLLSFSCRN---RLLLT 730
Query: 339 GTPLQNDLHELWSLLEFMMPDLFA---------TEDVDLKKLLNGE-DRDLIGRMKSILG 388
GTP+QN + ELW+LL F+MP LF ++D++ N E + + R+ IL
Sbjct: 731 GTPIQNSMQELWALLHFIMPSLFDSHDEFSDWFSKDIESHAQSNTELNEQQLRRLHVILK 790
Query: 389 PFILRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLAT 448
PF+LRR+K +V +L K++ + + Q+ Y++ + + A S D A
Sbjct: 791 PFMLRRIKKNVQSELGDKLEIDVFCDLTHRQKKYYQMLTSQISIMDLLDSANNSSDDSA- 849
Query: 449 IVGVLPQRQISNYFVQFRKIANHPLLVRR 477
+ + N +QFRK+ NHP L R
Sbjct: 850 -------QSLMNLVMQFRKVCNHPDLFER 871
>sp|Q4IAK7|SWR1_GIBZE Helicase SWR1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC
9075 / NRRL 31084) GN=SWR1 PE=3 SV=1
Length = 1691
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 119/329 (36%), Positives = 170/329 (51%), Gaps = 51/329 (15%)
Query: 167 VLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCP 226
L+ YQ G+++L LY G ILADEMGLGKTIQ I L L + GPHL++ P
Sbjct: 810 TLREYQRDGLDWLAGLYANSTNG-ILADEMGLGKTIQTIALLAHLACTHEVWGPHLVIVP 868
Query: 227 ASVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPP--FNVLLVCYSLFE 284
SV+ NWE E KKWCP F +L Y+G S+E + G +NV + Y L
Sbjct: 869 TSVMLNWEMEFKKWCPGFKILAYYG------SQEERKRKRQGWNNDDIWNVCITSYQLVL 922
Query: 285 RHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQN 344
+ D+++ KR RW +++DEAH +K+ S RW+ L+ N RL+LTGTPLQN
Sbjct: 923 Q-------DQQVFKRRRWHYMILDEAHNIKNFKSQRWQTLLGF--NTQARLLLTGTPLQN 973
Query: 345 DLHELWSLLEFMMP---------------DLFATEDVDL----KKLLNGEDRDLIGRMKS 385
+L ELWSLL F+MP D FA + + ++ ++ E R +I ++
Sbjct: 974 NLTELWSLLFFLMPAENGVGGFADLQEFHDWFAKPESQILESGREQMDDEARAIISKLHK 1033
Query: 386 ILGPFILRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDAD 445
+L P++LRRLK+DV +Q+ K + VE+ + + Q + Y LS D
Sbjct: 1034 VLRPYLLRRLKADVEKQMPAKYEHVEFCRLSKRQRELYD--------------GFLSRTD 1079
Query: 446 LATIVGVLPQRQISNYFVQFRKIANHPLL 474
+ I N +Q RK+ NHP L
Sbjct: 1080 TKETLNSGNYLSIINCLMQLRKVCNHPDL 1108
>sp|A1CZE5|INO80_NEOFI Putative DNA helicase ino80 OS=Neosartorya fischeri (strain ATCC 1020
/ DSM 3700 / FGSC A1164 / NRRL 181) GN=ino80 PE=3 SV=1
Length = 1708
Score = 191 bits (485), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 118/326 (36%), Positives = 178/326 (54%), Gaps = 37/326 (11%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
LK YQL G+N+L+ LY +GI G ILADEMGLGKTIQ+I+ + L ++N GP L++ PA
Sbjct: 833 LKEYQLKGLNWLVNLYEQGING-ILADEMGLGKTIQSISVMAYLAEVHNIWGPFLVIAPA 891
Query: 228 SVLENWERELKKWCPSFSVLQYHGAG------RTAYSRELSSLAKAGLPPPFNVLLVCYS 281
S L NW++E+ K+ P VL Y G+ R + R+ + K F+VL+ Y
Sbjct: 892 STLHNWQQEITKFVPDIKVLPYWGSAKDRKVLRKFWDRKHITYTKES---EFHVLVTSYQ 948
Query: 282 LFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTP 341
L D + ++ +W +++DEA A+K S RWKNL+ + RL+LTGTP
Sbjct: 949 LVVL-------DSQYFQKVKWQYMILDEAQAIKSSQSSRWKNLLGF--HCRNRLLLTGTP 999
Query: 342 LQNDLHELWSLLEFMMPDLFA---------TEDVDLKKLLNGE-DRDLIGRMKSILGPFI 391
+QN++ ELW+LL F+MP LF ++D++ N + + D + R+ IL PF+
Sbjct: 1000 IQNNMQELWALLHFIMPTLFDSHDEFSEWFSKDIESHAQSNTKLNEDQLRRLHMILKPFM 1059
Query: 392 LRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVG 451
LRR+K V Q+L K++ + + YR Y A R R++ + + A +
Sbjct: 1060 LRRVKKHVQQELGDKVEKDVFCDL------TYRQ--RAYYANLRNRVSIMDLIEKAAVGD 1111
Query: 452 VLPQRQISNYFVQFRKIANHPLLVRR 477
+ N +QFRK+ NHP L R
Sbjct: 1112 EADSTTLMNLVMQFRKVCNHPDLFER 1137
>sp|Q6BKC2|SWR1_DEBHA Helicase SWR1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 /
JCM 1990 / NBRC 0083 / IGC 2968) GN=SWR1 PE=3 SV=2
Length = 1616
Score = 191 bits (484), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 129/347 (37%), Positives = 180/347 (51%), Gaps = 68/347 (19%)
Query: 167 VLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCP 226
L+PYQ G+N+L LY G G ILADEMGLGKTIQ I+ L L ++ GPHLIV P
Sbjct: 780 TLRPYQKQGLNWLASLYNNGTNG-ILADEMGLGKTIQTISLLAYLAAEHHIWGPHLIVVP 838
Query: 227 ASVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERH 286
SV+ NWE E KK+ P F VL Y+G+ + + P F+V + Y L
Sbjct: 839 TSVMLNWEMEFKKFAPGFKVLTYYGSPQQRAQKR----KGWNKPNAFHVCITSYQLVVH- 893
Query: 287 SVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDL 346
D + KR RW +++DEAH +K+ S RW+ L++ N RL+LTGTPLQN+L
Sbjct: 894 ------DHQSFKRRRWRYMILDEAHNIKNFRSARWRALLNF--NTENRLLLTGTPLQNNL 945
Query: 347 HELWSLLEFM---------MPDLFAT-ED--------VD--LKKLLNG------------ 374
ELWSLL F+ MPD FA ED VD L+K NG
Sbjct: 946 MELWSLLYFLMPSSKVNQAMPDGFANLEDFQTWFGRPVDKILEKTSNGTSSDVIDENDKT 1005
Query: 375 ------EDRDLIGRMKSILGPFILRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIE 428
E R+ + R+ +L P++LRRLK DV +Q+ K + + Y + + Q R +
Sbjct: 1006 TQRMDEETRNTVSRLHQVLRPYLLRRLKKDVEKQMPGKYEHIIYCRLSKRQ----RYLYD 1061
Query: 429 EYRAVSRARIAK-LSDADLATIVGVLPQRQISNYFVQFRKIANHPLL 474
++ +SRA+ + L+ + +I+ L +Q RK+ NHP L
Sbjct: 1062 DF--MSRAQTKETLASGNFLSIINCL---------MQLRKVCNHPDL 1097
>sp|Q2UTQ9|INO80_ASPOR Putative DNA helicase ino80 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=ino80 PE=3 SV=1
Length = 1444
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 120/331 (36%), Positives = 182/331 (54%), Gaps = 47/331 (14%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
LK YQL G+N+L+ LY +GI G ILADEMGLGKTIQ+I+ + L ++N GP L++ PA
Sbjct: 633 LKEYQLKGLNWLVNLYEQGING-ILADEMGLGKTIQSISVMAYLAEVHNIWGPFLVIAPA 691
Query: 228 SVLENWERELKKWCPSFSVLQYHGAG------RTAYSRELSSLAKAGLPPPFNVLLVCYS 281
S L NW++E+ K+ P VL Y G+ R + R+ + K F+VL+ Y
Sbjct: 692 STLHNWQQEITKFVPDIKVLPYWGSAKDRKILRKFWDRKHITYTKES---EFHVLVTSYQ 748
Query: 282 LFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTP 341
L D + ++ +W +++DEA A+K S RWKNL+ + RL+LTGTP
Sbjct: 749 LVVL-------DAQYFQKVKWQYMILDEAQAIKSSQSSRWKNLLGFS--CRNRLLLTGTP 799
Query: 342 LQNDLHELWSLLEFMMPDLFA---------TEDVDLKKLLNGE-DRDLIGRMKSILGPFI 391
+QN++ ELW+LL F+MP LF ++D++ N + + D + R+ IL PF+
Sbjct: 800 IQNNMQELWALLHFIMPTLFDSHDEFSEWFSKDIESHAQSNTKLNEDQLKRLHMILKPFM 859
Query: 392 LRRLKSDVMQQLVPKIQWVEYVTMERPQEDAY-----RVAIEEYRAVSRARIAKLSDADL 446
LRR+K V Q+L K++ + + Q Y RV+I + + +A + +AD
Sbjct: 860 LRRVKKHVQQELGDKVEKDVFCDLTYRQRAYYTNLRNRVSIMDL--IEKAAVG--DEADS 915
Query: 447 ATIVGVLPQRQISNYFVQFRKIANHPLLVRR 477
T++ N +QFRK+ NHP L R
Sbjct: 916 TTLM---------NLVMQFRKVCNHPDLFER 937
>sp|Q74Z27|INO80_ASHGO Putative DNA helicase INO80 OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=INO80 PE=3 SV=2
Length = 1414
Score = 190 bits (483), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 122/331 (36%), Positives = 179/331 (54%), Gaps = 36/331 (10%)
Query: 167 VLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCP 226
LK YQL G+N+L LY +GI G ILADEMGLGKT+Q+I+ L L N GP ++V P
Sbjct: 654 TLKEYQLKGLNWLANLYDQGING-ILADEMGLGKTVQSISVLAHLAERYNIWGPFIVVTP 712
Query: 227 ASVLENWERELKKWCPSFSVLQYHGAG------RTAYSRELSSLAKAGLPPPFNVLLVCY 280
AS L NW E++K+ P F +L Y G G R + R+ +K PF+V++ Y
Sbjct: 713 ASTLHNWVNEIQKFVPDFKILPYWGNGNDRKILRRFWDRKHLRYSKDA---PFHVMITSY 769
Query: 281 SLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGT 340
+ D L++ +W +++DEA A+K S RWKNL+S + RL+LTGT
Sbjct: 770 QMI-------VSDAAYLQKMKWQYMILDEAQAIKSSQSSRWKNLLSF--HCRNRLLLTGT 820
Query: 341 PLQNDLHELWSLLEFMMPDLF---------ATEDVDLKKLLNGE-DRDLIGRMKSILGPF 390
P+QN + ELW+LL F+MP LF ++D++ N + ++ + R+ IL PF
Sbjct: 821 PIQNSMQELWALLHFIMPSLFDSHDEFNDWFSKDIESHAQSNTQLNQQQLRRLHMILKPF 880
Query: 391 ILRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEE----YRAVSRARIAKLSDADL 446
+LRR+K +V +L KI+ + Q Y+V + Y A+ A A S D
Sbjct: 881 MLRRIKKNVQSELGDKIEIDVMCDLTHRQAKLYQVLKSQVSASYDAIENA--ASNSSGDD 938
Query: 447 ATIVGVLPQRQISNYFVQFRKIANHPLLVRR 477
+ + L +I N ++FRK+ NHP L R
Sbjct: 939 SGNMS-LSDSKIMNTVMEFRKVCNHPDLFER 968
>sp|A1C9W6|INO80_ASPCL Putative DNA helicase ino80 OS=Aspergillus clavatus (strain ATCC 1007
/ CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=ino80
PE=3 SV=1
Length = 1707
Score = 190 bits (483), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 120/331 (36%), Positives = 182/331 (54%), Gaps = 47/331 (14%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
LK YQL G+N+L+ LY +GI G ILADEMGLGKTIQ+I+ + L ++N GP L++ PA
Sbjct: 835 LKEYQLKGLNWLVNLYEQGING-ILADEMGLGKTIQSISVMAYLAEVHNIWGPFLVIAPA 893
Query: 228 SVLENWERELKKWCPSFSVLQYHGAG------RTAYSRELSSLAKAGLPPPFNVLLVCYS 281
S L NW++E+ K+ P VL Y G+ R + R+ + K F+VL+ Y
Sbjct: 894 STLHNWQQEITKFVPDIKVLPYWGSAKDRKVLRKFWDRKHITYTKES---EFHVLVTSYQ 950
Query: 282 LFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTP 341
L D + ++ +W +++DEA A+K S RWKNL+ + RL+LTGTP
Sbjct: 951 LVVL-------DSQYFQKVKWQYMILDEAQAIKSSQSSRWKNLLGFS--CRNRLLLTGTP 1001
Query: 342 LQNDLHELWSLLEFMMPDLFA---------TEDVDLKKLLNGE-DRDLIGRMKSILGPFI 391
+QN++ ELW+LL F+MP LF ++D++ N + + D + R+ IL PF+
Sbjct: 1002 IQNNMQELWALLHFIMPTLFDSHDEFSEWFSKDIESHAQSNTKLNEDQLRRLHMILKPFM 1061
Query: 392 LRRLKSDVMQQLVPKIQWVEYVTMERPQEDAY-----RVAIEEYRAVSRARIAKLSDADL 446
LRR+K V Q+L K++ + + Q Y RV+I + + +A + +AD
Sbjct: 1062 LRRVKKHVQQELGDKVEKDVFCDLTYRQRAYYTNLRNRVSIMDL--IEKAAVG--DEADS 1117
Query: 447 ATIVGVLPQRQISNYFVQFRKIANHPLLVRR 477
T++ N +QFRK+ NHP L R
Sbjct: 1118 TTLM---------NLVMQFRKVCNHPDLFER 1139
>sp|A5E0W5|INO80_LODEL Putative DNA helicase ino80 OS=Lodderomyces elongisporus (strain ATCC
11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239)
GN=INO80 PE=3 SV=1
Length = 1575
Score = 190 bits (483), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 126/369 (34%), Positives = 193/369 (52%), Gaps = 38/369 (10%)
Query: 167 VLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCP 226
LK YQ+ G+N+L LY +GI G ILADEMGLGKT+Q+I+ L L +N GP L+V P
Sbjct: 736 TLKEYQIKGLNWLANLYEQGING-ILADEMGLGKTVQSISVLSYLAETHNIWGPFLVVTP 794
Query: 227 ASVLENWERELKKWCPSFSVLQYHGAG------RTAYSRELSSLAKAGLPPPFNVLLVCY 280
AS L NW++E+ K+ P+F VL Y G R + R+ K PF+VL+ Y
Sbjct: 795 ASTLHNWQQEISKFVPNFKVLPYWGHAKDRKVLRKFWDRKSLRYDKDA---PFHVLVTSY 851
Query: 281 SLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGT 340
L D ++ +W +++DEA A+K S RWK+L+S++ RL+LTGT
Sbjct: 852 QLI-------VSDIAYFQKMKWQYMILDEAQAIKSSQSSRWKSLLSLS--CRNRLLLTGT 902
Query: 341 PLQNDLHELWSLLEFMMPDLFA---------TEDVDLKKLLN-GEDRDLIGRMKSILGPF 390
P+QN + ELW+LL F+MP LF ++D++ N G D + R+ IL PF
Sbjct: 903 PIQNSMQELWALLHFIMPTLFDSHDEFSDWFSKDIESHAQSNTGLDEQQLRRLHMILKPF 962
Query: 391 ILRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIV 450
+LRR+K +V +L K++ + + Q+ Y+ + + + + + +
Sbjct: 963 MLRRIKKNVQSELGDKVEIDLFCDLTNRQKKYYQSLRSQISIMDLIDATTTNSSSNNSSL 1022
Query: 451 GVLPQRQISNYFVQFRKIANHPLLVRR--IYSDDDVVRFAKKLHPMGAF---GFECTLER 505
+ N +QFRK+ NHP L R + S +V+FA+ G+F G + +
Sbjct: 1023 DDSSTTSLVNLVMQFRKVCNHPDLFERADVRSPMALVKFAE----TGSFLREGNDLDVSY 1078
Query: 506 VIEELKNYS 514
E L NY+
Sbjct: 1079 ASENLINYN 1087
>sp|A4R227|INO80_MAGO7 Putative DNA helicase INO80 OS=Magnaporthe oryzae (strain 70-15 /
ATCC MYA-4617 / FGSC 8958) GN=INO80 PE=3 SV=1
Length = 1944
Score = 190 bits (482), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/352 (35%), Positives = 189/352 (53%), Gaps = 43/352 (12%)
Query: 167 VLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCP 226
LK YQL G+N+L+ LY +GI G ILADEMGLGKTIQ+I+ + L ++ GP L+V P
Sbjct: 1077 TLKEYQLKGLNWLVNLYEQGING-ILADEMGLGKTIQSISVMAYLAEHHDIWGPFLVVAP 1135
Query: 227 ASVLENWERELKKWCPSFSVLQYHGAG------RTAYSRELSSLAKAGLPPPFNVLLVCY 280
AS L NWE+E+K++ P ++ Y G+ R + R+ S+ + F+V + Y
Sbjct: 1136 ASTLHNWEQEIKRFVPDLKIVPYWGSASDRKILRKFWDRKHSTYKRDAQ---FHVAITSY 1192
Query: 281 SLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGT 340
+ D ++ +W +++DEA A+K S RWK L+S + RL+LTGT
Sbjct: 1193 QMV-------VSDVAYFQKMKWQYMILDEAQAIKSSQSSRWKCLLSF--HCRNRLLLTGT 1243
Query: 341 PLQNDLHELWSLLEFMMPDLFA---------TEDVDLKKLLNGE-DRDLIGRMKSILGPF 390
P+QN++ ELW+LL F+MP LF ++D++ N + + D + R+ IL PF
Sbjct: 1244 PIQNNMQELWALLHFIMPSLFDSHEEFSDWFSKDIESHAQSNSKLNEDQLKRLHMILKPF 1303
Query: 391 ILRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIV 450
+LRR+K V ++L KI+ Y + YR Y A R +I+ + + AT+
Sbjct: 1304 MLRRVKKHVQKELGDKIELDVYCDL------TYRQ--RAYYANLRNQISIMDLIEKATLG 1355
Query: 451 GVLPQRQISNYFVQFRKIANHPLLVRRIYSDD--DVVRFAKKLHPMGAFGFE 500
+ N +QFRK+ NHP L R + +VRFA+ G+F E
Sbjct: 1356 DDNDSGTLMNLVMQFRKVCNHPDLFERADTSSPLALVRFAE----TGSFARE 1403
>sp|Q4WTV7|INO80_ASPFU Putative DNA helicase ino80 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=ino80 PE=3
SV=1
Length = 1708
Score = 190 bits (482), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 120/331 (36%), Positives = 182/331 (54%), Gaps = 47/331 (14%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
LK YQL G+N+L+ LY +GI G ILADEMGLGKTIQ+I+ + L ++N GP L++ PA
Sbjct: 833 LKEYQLKGLNWLVNLYEQGING-ILADEMGLGKTIQSISVMAYLAEVHNIWGPFLVIAPA 891
Query: 228 SVLENWERELKKWCPSFSVLQYHGAG------RTAYSRELSSLAKAGLPPPFNVLLVCYS 281
S L NW++E+ K+ P VL Y G+ R + R+ + K F+VL+ Y
Sbjct: 892 STLHNWQQEITKFVPDIKVLPYWGSAKDRKVLRKFWDRKHITYTKES---EFHVLVTSYQ 948
Query: 282 LFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTP 341
L D + ++ +W +++DEA A+K S RWKNL+ + RL+LTGTP
Sbjct: 949 LVVL-------DSQYFQKVKWQYMILDEAQAIKSSQSSRWKNLLGF--HCRNRLLLTGTP 999
Query: 342 LQNDLHELWSLLEFMMPDLFA---------TEDVDLKKLLNGE-DRDLIGRMKSILGPFI 391
+QN++ ELW+LL F+MP LF ++D++ N + + D + R+ IL PF+
Sbjct: 1000 IQNNMQELWALLHFIMPTLFDSHDEFSEWFSKDIESHAQSNTKLNEDQLRRLHMILKPFM 1059
Query: 392 LRRLKSDVMQQLVPKIQWVEYVTMERPQEDAY-----RVAIEEYRAVSRARIAKLSDADL 446
LRR+K V Q+L K++ + + Q Y RV+I + + +A + +AD
Sbjct: 1060 LRRVKKHVQQELGDKVEKDVFCDLTYRQRAYYTNLRNRVSIMDL--IEKAAVG--DEADS 1115
Query: 447 ATIVGVLPQRQISNYFVQFRKIANHPLLVRR 477
T++ N +QFRK+ NHP L R
Sbjct: 1116 TTLM---------NLVMQFRKVCNHPDLFER 1137
>sp|Q8RXS6|INO80_ARATH DNA helicase INO80 OS=Arabidopsis thaliana GN=INO80 PE=2 SV=2
Length = 1507
Score = 190 bits (482), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 118/328 (35%), Positives = 175/328 (53%), Gaps = 33/328 (10%)
Query: 164 FQPVLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLI 223
F+ LK YQ+ G+ +L+ Y +G+ G ILADEMGLGKTIQA+ +L L N GP L+
Sbjct: 582 FKGTLKEYQMKGLQWLVNCYEQGLNG-ILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLV 640
Query: 224 VCPASVLENWERELKKWCPSFSVLQYHGA--GRTAYSRELSSLAKAGLPPPFNVLLVCYS 281
V PASVL NW E+ ++CP L Y G RT + ++ F++L+ Y
Sbjct: 641 VAPASVLNNWADEISRFCPDLKTLPYWGGLQERTILRKNINPKRMYRRDAGFHILITSYQ 700
Query: 282 LFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTP 341
L D K +R +W +++DEA A+K +S RWK L+S N RL+LTGTP
Sbjct: 701 LL-------VTDEKYFRRVKWQYMVLDEAQAIKSSSSIRWKTLLSF--NCRNRLLLTGTP 751
Query: 342 LQNDLHELWSLLEFMMPDLFATEDVDLKKLLNGEDRDL----------IGRMKSILGPFI 391
+QN++ ELW+LL F+MP LF D + G + + R+ +IL PF+
Sbjct: 752 IQNNMAELWALLHFIMPMLFDNHDQFNEWFSKGIENHAEHGGTLNEHQLNRLHAILKPFM 811
Query: 392 LRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVG 451
LRR+K DV+ +L K + + + Q+ Y+ AI+ ++ +A+L D++
Sbjct: 812 LRRVKKDVVSELTTKTEVTVHCKLSSRQQAFYQ-AIK-----NKISLAELFDSNRGQFTD 865
Query: 452 --VLPQRQISNYFVQFRKIANHPLLVRR 477
VL + N +Q RK+ NHP L R
Sbjct: 866 KKVL---NLMNIVIQLRKVCNHPELFER 890
>sp|Q6ZPV2|INO80_MOUSE DNA helicase INO80 OS=Mus musculus GN=Ino80 PE=2 SV=2
Length = 1559
Score = 189 bits (481), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 128/332 (38%), Positives = 174/332 (52%), Gaps = 39/332 (11%)
Query: 164 FQPVLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLI 223
F LK YQL G+N+L LY +GI G ILADEMGLGKT+Q+I L L N GP LI
Sbjct: 516 FNGKLKGYQLKGMNWLANLYEQGING-ILADEMGLGKTVQSIALLAHLAERENIWGPFLI 574
Query: 224 VCPASVLENWERELKKWCPSFSVLQYHGA--GRTAYSRELSSLAKAGLPPPFNVLLVCYS 281
+ PAS L NW +E ++ P F VL Y G R R S PF+V++ Y
Sbjct: 575 ISPASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITSYQ 634
Query: 282 LFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTP 341
L VQ D K +R +W +++DEA ALK +S RWK L+ RL+LTGTP
Sbjct: 635 LV----VQ---DVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQF--QCRNRLLLTGTP 685
Query: 342 LQNDLHELWSLLEFMMPDLFATED-------VDLKKLLNGE---DRDLIGRMKSILGPFI 391
+QN + ELW+LL F+MP LF + + D++ + D + + R+ IL PF+
Sbjct: 686 IQNTMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFM 745
Query: 392 LRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDAD-LATIV 450
LRR+K DV +L KI+ + Y + Q+ Y +A K+S D L + +
Sbjct: 746 LRRIKKDVENELSDKIEILTYCQLTSRQKLLY-----------QALKNKISIEDLLQSSM 794
Query: 451 GVLPQRQ-----ISNYFVQFRKIANHPLLVRR 477
G Q Q + N +QFRK+ NHP L R
Sbjct: 795 GSTQQAQNTTSSLMNLVMQFRKVCNHPELFER 826
>sp|Q9NDJ2|DOM_DROME Helicase domino OS=Drosophila melanogaster GN=dom PE=1 SV=2
Length = 3198
Score = 189 bits (481), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 115/317 (36%), Positives = 178/317 (56%), Gaps = 42/317 (13%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQ +G+++L+ + + + G ILADEMGLGKTIQ I L L + GPHLIV P+
Sbjct: 914 LREYQHIGLDWLVTMNERKLNG-ILADEMGLGKTIQTIALLAHLACAKGNWGPHLIVVPS 972
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPP--FNVLLVCYSLFER 285
SV+ NWE E KKWCP F +L Y+G S++ L + G P F+V + Y L
Sbjct: 973 SVMLNWEMEFKKWCPGFKILTYYG------SQKERKLKRVGWTKPNAFHVCITSYKLV-- 1024
Query: 286 HSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
VQ D++ +R +W +++DEA +K+ S RW+ L++ + +RL+LTGTPLQND
Sbjct: 1025 --VQ---DQQSFRRKKWKYLILDEAQNIKNFKSQRWQLLLNFS--TERRLLLTGTPLQND 1077
Query: 346 LHELWSLLEFMMPDLFATE-------DVDLKKLLNGE---DRDLIGRMKSILGPFILRRL 395
L ELWSL+ F+MP +F++ + ++ G + LI R+ ++ PF+LRRL
Sbjct: 1078 LMELWSLMHFLMPYVFSSHREFKEWFSNPMTGMIEGNMEYNETLITRLHKVIRPFLLRRL 1137
Query: 396 KSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQ 455
K +V +Q+ K + V + Q Y E++ + ++ R L +L +++ VL
Sbjct: 1138 KKEVEKQMPKKYEHVITCRLSNRQRYLY----EDFMSRAKTR-ETLQTGNLLSVINVL-- 1190
Query: 456 RQISNYFVQFRKIANHP 472
+Q RK+ NHP
Sbjct: 1191 -------MQLRKVCNHP 1200
>sp|Q5BAZ5|INO80_EMENI Putative DNA helicase ino80 OS=Emericella nidulans (strain FGSC A4 /
ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=ino80 PE=3
SV=1
Length = 1612
Score = 189 bits (481), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 123/373 (32%), Positives = 192/373 (51%), Gaps = 47/373 (12%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
LK YQL G+N+L+ LY +GI G ILADEMGLGKTIQ+I+ + L ++N GP L++ PA
Sbjct: 798 LKEYQLKGLNWLVNLYEQGING-ILADEMGLGKTIQSISVMAYLAEVHNIWGPFLVIAPA 856
Query: 228 SVLENWERELKKWCPSFSVLQYHGAG------RTAYSRELSSLAKAGLPPPFNVLLVCYS 281
S L NW++E+ K+ P+ VL Y G R + R+ + K F+VL+ Y
Sbjct: 857 STLHNWQQEITKFVPNIKVLPYWGNAKDRKILRKFWDRKHITYTKES---EFHVLVTSYQ 913
Query: 282 LFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTP 341
L D + ++ +W +++DEA A+K S RWK+L+ + RL+LTGTP
Sbjct: 914 LVVL-------DAQYFQKVKWQYMILDEAQAIKSSQSSRWKSLLGF--HCRNRLLLTGTP 964
Query: 342 LQNDLHELWSLLEFMMPDLFA---------TEDVDLKKLLNGE-DRDLIGRMKSILGPFI 391
+QN++ ELW+LL F+MP LF ++D++ N + + D + R+ IL PF+
Sbjct: 965 IQNNMQELWALLHFIMPTLFDSHDEFSEWFSKDIESHAQSNTKLNEDQLRRLHMILKPFM 1024
Query: 392 LRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVG 451
LRR+K V Q+L K++ + + Q Y R R++ + + A +
Sbjct: 1025 LRRVKKHVQQELGDKVEKDVFCDLTYRQRALY--------TNLRNRVSIMDLIEKAAVGD 1076
Query: 452 VLPQRQISNYFVQFRKIANHPLLVRRI----------YSDDDVVRFAKKLHPMGAFGFEC 501
+ N +QFRK+ NHP L R +++ + + GAF F
Sbjct: 1077 ETDSTTLMNLVMQFRKVCNHPDLFERAETKSPFSLAHFAETASFNIKQSIEDDGAFSFLR 1136
Query: 502 TLERVIEELKNYS 514
++ + E NYS
Sbjct: 1137 FVDTSVGEAFNYS 1149
>sp|A2R9H9|INO80_ASPNC Putative DNA helicase ino80 OS=Aspergillus niger (strain CBS 513.88 /
FGSC A1513) GN=ino80 PE=3 SV=1
Length = 1697
Score = 189 bits (480), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 120/331 (36%), Positives = 182/331 (54%), Gaps = 47/331 (14%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
LK YQL G+N+L+ LY +GI G ILADEMGLGKTIQ+I+ + L ++N GP L++ PA
Sbjct: 823 LKEYQLKGLNWLVNLYEQGING-ILADEMGLGKTIQSISVMAYLAEVHNIWGPFLVIAPA 881
Query: 228 SVLENWERELKKWCPSFSVLQYHGAG------RTAYSRELSSLAKAGLPPPFNVLLVCYS 281
S L NW++E+ K+ P VL Y G+ R + R+ + K F+VL+ Y
Sbjct: 882 STLHNWQQEITKFVPDIKVLPYWGSAKDRKILRKFWDRKHITYTKES---EFHVLVTSYQ 938
Query: 282 LFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTP 341
L D + ++ +W +++DEA A+K S RWKNL+ + RL+LTGTP
Sbjct: 939 LVVL-------DAQYFQKVKWQYMILDEAQAIKSSQSSRWKNLLGF--HCRNRLLLTGTP 989
Query: 342 LQNDLHELWSLLEFMMPDLFA---------TEDVDLKKLLNGE-DRDLIGRMKSILGPFI 391
+QN++ ELW+LL F+MP LF ++D++ N + + D + R+ IL PF+
Sbjct: 990 IQNNMQELWALLHFIMPTLFDSHDEFSEWFSKDIESHAQSNTKLNEDQLRRLHMILKPFM 1049
Query: 392 LRRLKSDVMQQLVPKIQWVEYVTMERPQEDAY-----RVAIEEYRAVSRARIAKLSDADL 446
LRR+K V Q+L K++ + + Q Y RV+I + + +A + +AD
Sbjct: 1050 LRRVKKHVQQELGDKVEKDIFCDLTYRQRAYYTNLRNRVSIMDL--IEKAAVG--DEADS 1105
Query: 447 ATIVGVLPQRQISNYFVQFRKIANHPLLVRR 477
T++ N +QFRK+ NHP L R
Sbjct: 1106 TTLM---------NLVMQFRKVCNHPDLFER 1127
>sp|Q0CA78|INO80_ASPTN Putative DNA helicase ino80 OS=Aspergillus terreus (strain NIH 2624 /
FGSC A1156) GN=ino80 PE=3 SV=1
Length = 1690
Score = 189 bits (480), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 120/331 (36%), Positives = 182/331 (54%), Gaps = 47/331 (14%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
LK YQL G+N+L+ LY +GI G ILADEMGLGKTIQ+I+ + L ++N GP L++ PA
Sbjct: 818 LKEYQLKGLNWLVNLYEQGING-ILADEMGLGKTIQSISVMAYLAEVHNIWGPFLVIAPA 876
Query: 228 SVLENWERELKKWCPSFSVLQYHGAG------RTAYSRELSSLAKAGLPPPFNVLLVCYS 281
S L NW++E+ K+ P VL Y G+ R + R+ + K F+VL+ Y
Sbjct: 877 STLHNWQQEITKFVPDIKVLPYWGSAKDRKILRKFWDRKHITYTKES---EFHVLVTSYQ 933
Query: 282 LFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTP 341
L D + ++ +W +++DEA A+K S RWKNL+ + RL+LTGTP
Sbjct: 934 LVVL-------DAQYFQKVKWQYMILDEAQAIKSSQSSRWKNLLGF--HCRNRLLLTGTP 984
Query: 342 LQNDLHELWSLLEFMMPDLFA---------TEDVDLKKLLNGE-DRDLIGRMKSILGPFI 391
+QN++ ELW+LL F+MP LF ++D++ N + + D + R+ IL PF+
Sbjct: 985 IQNNMQELWALLHFIMPTLFDSHDEFSEWFSKDIESHAQSNTKLNEDQLKRLHMILKPFM 1044
Query: 392 LRRLKSDVMQQLVPKIQWVEYVTMERPQEDAY-----RVAIEEYRAVSRARIAKLSDADL 446
LRR+K V Q+L K++ + + Q Y RV+I + + +A + +AD
Sbjct: 1045 LRRVKKHVQQELGDKVEKDVFCDLTYRQRAYYTGLRDRVSIMDL--IEKAAVG--DEADS 1100
Query: 447 ATIVGVLPQRQISNYFVQFRKIANHPLLVRR 477
T++ N +QFRK+ NHP L R
Sbjct: 1101 TTLM---------NLVMQFRKVCNHPDLFER 1122
>sp|G5EDG2|SMRCD_CAEEL SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A containing DEAD/H box 1 homolog
OS=Caenorhabditis elegans GN=M03C11.8 PE=3 SV=1
Length = 989
Score = 189 bits (480), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 130/373 (34%), Positives = 187/373 (50%), Gaps = 53/373 (14%)
Query: 167 VLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCP 226
L YQL+GV +L+++Y K + AIL DEMGLGKTIQ + +L LK + GPHLIV P
Sbjct: 393 TLHDYQLIGVKWLIMMYNKDL-NAILGDEMGLGKTIQIVAFLSYLKQIGK-TGPHLIVVP 450
Query: 227 ASVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPPFNVLLVCYSLFERH 286
+S +ENW E KWCPS +L Y+G+ + L K +V+L Y++
Sbjct: 451 SSTIENWIGEFHKWCPSIQLLTYYGS--QDERKHLRHRVKKQ-KDHIDVILTTYNMVTSK 507
Query: 287 SVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDL 346
S DD+K K + + V+ DE H LK+ +S R++ LM V ++++LTGTPLQN+L
Sbjct: 508 S----DDKKFFKNFSLNYVIYDEGHMLKNCDSERYRGLMKV--KGKKKILLTGTPLQNNL 561
Query: 347 HELWSLLEFMMPDLFATEDVDLKKLLNG---------------EDRDLIGRMKSILGPFI 391
EL SL+ F++ +F D+ LL +D I K+IL P+I
Sbjct: 562 IELISLMYFVLSKVFNKYCEDITHLLQHFKQLGPALDTKNKALYQQDRIEEAKAILQPYI 621
Query: 392 LRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVG 451
LRRLK+ V+ L K + + V M++PQ+ Y IV
Sbjct: 622 LRRLKNQVLGSLPSKSEQIIEVEMKKPQKQLY-----------------------DNIVE 658
Query: 452 VLPQRQIS----NYFVQFRKIANHPLLVRRIYSDDDVVRFAKKLHPMGAFGFECTLERVI 507
L Q + S ++ R+ ANHPLL R Y+D + + AK L + + V
Sbjct: 659 ALQQSEESGDSYGSLMRLRQAANHPLLRRSEYTDQKLDKIAKMLCLREKAYADKKWQHVS 718
Query: 508 EELKNYSDFSIHQ 520
E+L SD IHQ
Sbjct: 719 EDLAWLSDIKIHQ 731
>sp|Q9ULG1|INO80_HUMAN DNA helicase INO80 OS=Homo sapiens GN=INO80 PE=1 SV=2
Length = 1556
Score = 189 bits (479), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 128/332 (38%), Positives = 174/332 (52%), Gaps = 39/332 (11%)
Query: 164 FQPVLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLI 223
F LK YQL G+N+L LY +GI G ILADEMGLGKT+Q+I L L N GP LI
Sbjct: 514 FNGKLKGYQLKGMNWLANLYEQGING-ILADEMGLGKTVQSIALLAHLAERENIWGPFLI 572
Query: 224 VCPASVLENWERELKKWCPSFSVLQYHGA--GRTAYSRELSSLAKAGLPPPFNVLLVCYS 281
+ PAS L NW +E ++ P F VL Y G R R S PF+V++ Y
Sbjct: 573 ISPASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITSYQ 632
Query: 282 LFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTP 341
L VQ D K +R +W +++DEA ALK +S RWK L+ RL+LTGTP
Sbjct: 633 LV----VQ---DVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQF--QCRNRLLLTGTP 683
Query: 342 LQNDLHELWSLLEFMMPDLFATED-------VDLKKLLNGE---DRDLIGRMKSILGPFI 391
+QN + ELW+LL F+MP LF + + D++ + D + + R+ IL PF+
Sbjct: 684 IQNTMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFM 743
Query: 392 LRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDAD-LATIV 450
LRR+K DV +L KI+ + Y + Q+ Y +A K+S D L + +
Sbjct: 744 LRRIKKDVENELSDKIEILMYCQLTSRQKLLY-----------QALKNKISIEDLLQSSM 792
Query: 451 GVLPQRQ-----ISNYFVQFRKIANHPLLVRR 477
G Q Q + N +QFRK+ NHP L R
Sbjct: 793 GSTQQAQNTTSSLMNLVMQFRKVCNHPELFER 824
>sp|Q6ZRS2|SRCAP_HUMAN Helicase SRCAP OS=Homo sapiens GN=SRCAP PE=1 SV=3
Length = 3230
Score = 188 bits (478), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 126/370 (34%), Positives = 194/370 (52%), Gaps = 62/370 (16%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
L+ YQ +G+++L+ +Y K + G ILADEMGLGKTIQ I+ L L + GPHLI+ P
Sbjct: 618 LREYQHIGLDWLVTMYEKKLNG-ILADEMGLGKTIQTISLLAHLACEKGNWGPHLIIVPT 676
Query: 228 SVLENWERELKKWCPSFSVLQYHGAGRTAYSRELSSLAKAGLPPP--FNVLLVCYSLFER 285
SV+ NWE ELK+WCPSF +L Y+GA ++ L + G P F+V + Y L +
Sbjct: 677 SVMLNWEMELKRWCPSFKILTYYGA------QKERKLKRQGWTKPNAFHVCITSYKLVLQ 730
Query: 286 HSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 345
D + +R W +++DEA +K+ S RW++L++ N+ +RL+LTGTPLQN
Sbjct: 731 -------DHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNF--NSQRRLLLTGTPLQNS 781
Query: 346 LHELWSLLEFMMPDLFATE-------DVDLKKLLNGE---DRDLIGRMKSILGPFILRRL 395
L ELWSL+ F+MP +F + L ++ G + L+ R+ +L PF+LRR+
Sbjct: 782 LMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRPFLLRRV 841
Query: 396 KSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQ 455
K DV +Q+ K + V + + Q Y +++ A + + L+ +++
Sbjct: 842 KVDVEKQMPKKYEHVIRCRLSKRQRCLY----DDFMAQTTTK-ETLATGHFMSVI----- 891
Query: 456 RQISNYFVQFRKIANHPLLV--RRI----------YSDDDVVRFAKKLHP-----MGAF- 497
N +Q RK+ NHP L R + +S +V A +HP MG F
Sbjct: 892 ----NILMQLRKVCNHPNLFDPRPVTSPFITPGICFSTASLVLRATDVHPLQRIDMGRFD 947
Query: 498 --GFECTLER 505
G E + R
Sbjct: 948 LIGLEGRVSR 957
>sp|A6ZU34|INO80_YEAS7 Putative DNA helicase INO80 OS=Saccharomyces cerevisiae (strain
YJM789) GN=INO80 PE=3 SV=1
Length = 1495
Score = 188 bits (478), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 121/331 (36%), Positives = 179/331 (54%), Gaps = 36/331 (10%)
Query: 167 VLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCP 226
LK YQL G+N+L LY +GI G ILADEMGLGKT+Q+I+ L L +N GP L+V P
Sbjct: 711 TLKEYQLKGLNWLANLYDQGING-ILADEMGLGKTVQSISVLAHLAENHNIWGPFLVVTP 769
Query: 227 ASVLENWERELKKWCPSFSVLQYHGAG------RTAYSRELSSLAKAGLPPPFNVLLVCY 280
AS L NW E+ K+ P F +L Y G R + R+ +K PF+V++ Y
Sbjct: 770 ASTLHNWVNEISKFLPQFKILPYWGNANDRKVLRKFWDRKNLRYSKNA---PFHVMVTSY 826
Query: 281 SLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGT 340
+ D L++ +W +++DEA A+K S RWKNL+S + RL+LTGT
Sbjct: 827 QMVV-------TDANYLQKMKWQYMILDEAQAIKSSQSSRWKNLLSF--HCRNRLLLTGT 877
Query: 341 PLQNDLHELWSLLEFMMPDLFA---------TEDVDLKKLLNGE-DRDLIGRMKSILGPF 390
P+QN + ELW+LL F+MP LF ++D++ N + ++ + R+ IL PF
Sbjct: 878 PIQNSMQELWALLHFIMPSLFDSHDEFNEWFSKDIESHAEANTKLNQQQLRRLHMILKPF 937
Query: 391 ILRRLKSDVMQQLVPKIQWVEYVTMERPQEDAYRVAIEE----YRAVSRARIAKLSDADL 446
+LRR+K +V +L KI+ + + Q Y+V + Y A+ A S ++
Sbjct: 938 MLRRVKKNVQSELGDKIEIDVLCDLTQRQAKLYQVLKSQISTNYDAIENAATND-STSNS 996
Query: 447 ATIVGVLPQRQISNYFVQFRKIANHPLLVRR 477
A+ G + + N +QFRK+ NHP L R
Sbjct: 997 ASNSG--SDQNLINAVMQFRKVCNHPDLFER 1025
>sp|Q4IL82|INO80_GIBZE Putative DNA helicase INO80 OS=Gibberella zeae (strain PH-1 / ATCC
MYA-4620 / FGSC 9075 / NRRL 31084) GN=INO80 PE=3 SV=1
Length = 1904
Score = 188 bits (478), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 119/329 (36%), Positives = 177/329 (53%), Gaps = 43/329 (13%)
Query: 168 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPHLIVCPA 227
LK YQL G+N+L+ LY +GI G ILADEMGLGKT+Q+I+ + L ++ GP L+V PA
Sbjct: 1045 LKEYQLKGLNWLVNLYEQGING-ILADEMGLGKTVQSISVMAYLAEKHDIWGPFLVVAPA 1103
Query: 228 SVLENWERELKKWCPSFSVLQYHGAG------RTAYSRELSSLAKAGLPPPFNVLLVCYS 281
S L NW++E+ K+ P F +L Y G R + R+ ++ K PF+V + Y
Sbjct: 1104 STLHNWQQEIAKFVPEFKILPYWGGASDRKVLRKFWDRKHTTYRKDA---PFHVCVTSYQ 1160
Query: 282 LFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTP 341
L D ++ RW +++DEA A+K S RWK L++ + RL+LTGTP
Sbjct: 1161 LV-------VSDVAYFQKMRWQYMILDEAQAIKSSQSSRWKALLNF--HCRNRLLLTGTP 1211
Query: 342 LQNDLHELWSLLEFMMPDLFA---------TEDVDLKKLLNGE-DRDLIGRMKSILGPFI 391
+QN++ ELW+LL F+MP LF ++D++ N + + D + R+ IL PF+
Sbjct: 1212 IQNNMQELWALLHFIMPSLFDSHDEFSEWFSKDIESHAQSNTKLNEDQLKRLHMILKPFM 1271
Query: 392 LRRLKSDVMQQLVPKIQWVEYVTMERPQEDAY---RVAIEEYRAVSRARIAKLSDADLAT 448
LRR+K V ++L KI+ + + Q Y R I V +A + D D T
Sbjct: 1272 LRRVKKHVQKELGDKIELDIFCDLTYRQRAYYSNLRNQINIMDLVEKATMG--DDQDSGT 1329
Query: 449 IVGVLPQRQISNYFVQFRKIANHPLLVRR 477
++ N +QFRK+ NHP L R
Sbjct: 1330 LM---------NLVMQFRKVCNHPDLFER 1349
>sp|Q8RWY3|ISW2_ARATH Putative chromatin-remodeling complex ATPase chain OS=Arabidopsis
thaliana GN=At3g06400 PE=2 SV=3
Length = 1055
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 114/319 (35%), Positives = 185/319 (57%), Gaps = 34/319 (10%)
Query: 162 SDFQPVLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLMLLKHLNNDPGPH 221
S Q ++ YQL G+N+L+ LY GI G ILADEMGLGKT+Q I+ L L GPH
Sbjct: 183 SCIQGKMRDYQLAGLNWLIRLYENGING-ILADEMGLGKTLQTISLLAYLHEYRGINGPH 241
Query: 222 LIVCPASVLENWERELKKWCPSFSVLQYHGA-GRTAYSRELSSLAKAGLPPPFNVLLVCY 280
++V P S L NW E++++CP +++ G + RE L AG F+ +C
Sbjct: 242 MVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE--DLLVAG---KFD---ICV 293
Query: 281 SLFERHSVQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGT 340
+ FE ++++K L+R+ W +++DEAH +K++NS K + + N RL++TGT
Sbjct: 294 TSFE-MAIKEK---TALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFS--TNYRLLITGT 347
Query: 341 PLQNDLHELWSLLEFMMPDLFAT-EDVDLKKLLNGED--RDLIGRMKSILGPFILRRLKS 397
PLQN+LHELW+LL F++P++F++ E D ++GE+ ++++ ++ +L PF+LRRLKS
Sbjct: 348 PLQNNLHELWALLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKS 407
Query: 398 DVMQQLVPKIQWVEYVTMERPQEDAYRVAIEEYRAVSRARIAKLSDADLATIVGVLPQRQ 457
DV + L PK + + V M + Q+ Y+ +++ DL + +++
Sbjct: 408 DVEKGLPPKKETILKVGMSQMQKQYYKALLQK---------------DLEAVNAGGERKR 452
Query: 458 ISNYFVQFRKIANHPLLVR 476
+ N +Q RK NHP L +
Sbjct: 453 LLNIAMQLRKCCNHPYLFQ 471
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 206,016,648
Number of Sequences: 539616
Number of extensions: 9523280
Number of successful extensions: 93354
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 507
Number of HSP's successfully gapped in prelim test: 618
Number of HSP's that attempted gapping in prelim test: 77160
Number of HSP's gapped (non-prelim): 8262
length of query: 520
length of database: 191,569,459
effective HSP length: 122
effective length of query: 398
effective length of database: 125,736,307
effective search space: 50043050186
effective search space used: 50043050186
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)