Query         039293
Match_columns 512
No_of_seqs    185 out of 2580
Neff          11.0
Searched_HMMs 29240
Date          Mon Mar 25 13:54:30 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039293.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039293hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3k9v_A 1,25-dihydroxyvitamin D 100.0 1.3E-77 4.5E-82  598.9  45.0  454   21-512    12-482 (482)
  2 3ld6_A Lanosterol 14-alpha dem 100.0 2.3E-77   8E-82  592.3  35.7  433   42-512    12-453 (461)
  3 2ve3_A Putative cytochrome P45 100.0 2.1E-76 7.3E-81  581.9  41.0  439   23-512     2-443 (444)
  4 3nxu_A Cytochrome P450 3A4; al 100.0 3.4E-76 1.2E-80  588.7  33.9  445   38-512    11-474 (485)
  5 3swz_A Steroid 17-alpha-hydrox 100.0 3.1E-75 1.1E-79  582.7  39.2  447   41-512     8-478 (494)
  6 3s79_A Cytochrome P450 19A1; o 100.0 2.2E-74 7.4E-79  578.4  42.9  438   41-512    45-495 (503)
  7 1r9o_A Cytochrome P450 2C9; mo 100.0 9.8E-75 3.3E-79  576.3  37.3  443   42-512    12-473 (477)
  8 2fdv_A Cytochrome P450 2A6; CY 100.0 1.5E-74   5E-79  574.6  37.9  443   42-512    11-472 (476)
  9 3n9y_A Cholesterol SIDE-chain  100.0 2.4E-74 8.2E-79  575.7  39.2  444   42-512    10-474 (487)
 10 1po5_A Cytochrome P450 2B4; ox 100.0 6.1E-75 2.1E-79  577.4  34.4  443   42-512    11-472 (476)
 11 3tbg_A Cytochrome P450 2D6; mo 100.0 1.3E-74 4.5E-79  576.7  36.4  444   41-512    10-475 (479)
 12 3e6i_A CYPIIE1, P450-J, cytoch 100.0   5E-74 1.7E-78  571.9  39.8  444   41-512    10-471 (476)
 13 3czh_A Cytochrome P450 2R1; vi 100.0 2.1E-73 7.1E-78  566.5  42.0  445   42-512    13-475 (481)
 14 3pm0_A Cypib1, cytochrome P450 100.0 2.8E-74 9.5E-79  578.4  35.9  445   41-512     9-483 (507)
 15 2ij2_A Cytochrome P450 BM3; mo 100.0 5.6E-74 1.9E-78  568.6  37.3  439   41-512     3-451 (470)
 16 2hi4_A Cytochrome P450 1A2; CY 100.0 4.6E-74 1.6E-78  573.6  35.8  443   42-512    17-487 (495)
 17 3gw9_A Sterol 14alpha-demethyl 100.0 5.7E-73 1.9E-77  560.3  36.8  434   41-512     3-449 (450)
 18 2cib_A Cytochrome P450 51; hem 100.0 5.9E-73   2E-77  559.2  36.5  433   42-512     5-448 (455)
 19 3qz1_A Steroid 21-hydroxylase; 100.0 1.5E-73 5.1E-78  571.3  29.8  417   80-512    43-483 (496)
 20 3dbg_A Putative cytochrome P45 100.0 1.6E-73 5.3E-78  565.8  29.1  433   40-510    22-459 (467)
 21 3i3k_A Lanosterol 14-alpha dem 100.0 1.1E-71 3.8E-76  552.1  36.0  432   41-510    11-452 (461)
 22 3mdm_A Cholesterol 24-hydroxyl 100.0 9.1E-71 3.1E-75  545.0  40.2  413   82-512    12-441 (456)
 23 3dax_A Cytochrome P450 7A1; ch 100.0   1E-68 3.5E-73  535.6  28.2  433   42-511    14-484 (491)
 24 3b6h_A Prostacyclin synthase;  100.0 2.5E-66 8.5E-71  518.9  37.2  430   42-512    19-489 (498)
 25 3v8d_A Cholesterol 7-alpha-mon 100.0   2E-67 6.9E-72  525.6  26.5  432   42-510    14-483 (491)
 26 3b98_A Prostaglandin I2 syntha 100.0 2.7E-66 9.3E-71  515.9  30.6  424   42-512    19-470 (475)
 27 2cd8_A Cytochrome P450 monooxy 100.0   6E-66   2E-70  504.3  31.5  392   41-512    26-428 (436)
 28 1izo_A P450bsbeta, cytochrome  100.0 3.7E-64 1.3E-68  490.6  39.3  399   49-512     8-415 (417)
 29 1n97_A CYP175A1; electron tran 100.0 3.4E-66 1.2E-70  499.7  23.4  383   44-512     2-386 (389)
 30 3awm_A Fatty acid alpha-hydrox 100.0 2.6E-63 8.8E-68  484.4  37.8  401   43-512     4-413 (415)
 31 2jjn_A Cytochrome P450 113A1;  100.0 9.3E-64 3.2E-68  486.0  28.1  400   17-512     3-406 (411)
 32 1cpt_A Cytochrome P450-TERP; o 100.0 5.5E-63 1.9E-67  483.2  27.7  384   81-512    26-428 (428)
 33 1ued_A P450 OXYC, P450 monooxy 100.0 2.5E-62 8.7E-67  474.8  31.5  364   81-509    25-406 (406)
 34 1jfb_A Nitric-oxide reductase  100.0 1.1E-61 3.9E-66  471.1  34.9  365   43-487     3-381 (404)
 35 3ejb_B Biotin biosynthesis cyt 100.0 6.6E-62 2.2E-66  472.7  31.4  376   79-512    12-396 (404)
 36 3a4g_A Vitamin D hydroxylase;  100.0 1.2E-61 3.9E-66  470.3  33.0  372   78-512    18-401 (411)
 37 1z8o_A 6-deoxyerythronolide B  100.0 3.4E-61 1.2E-65  466.9  35.9  379   70-510     4-403 (404)
 38 2zwu_A Camphor 5-monooxygenase 100.0 2.4E-62 8.1E-67  475.4  26.2  389   41-512    11-410 (415)
 39 1gwi_A CYP154C1, cytochrome P4 100.0   7E-62 2.4E-66  472.2  29.5  372   81-512    18-409 (411)
 40 3aba_A Cytochrome P450; oxidor 100.0 2.9E-61 9.9E-66  466.9  33.3  371   80-512    19-402 (403)
 41 3buj_A CALO2; heme, iron, meta 100.0 1.3E-61 4.4E-66  469.0  30.3  371   80-512    13-396 (397)
 42 1s1f_A Putative cytochrome P45 100.0 2.3E-61 7.9E-66  468.1  30.4  383   40-509     7-404 (406)
 43 1odo_A Putative cytochrome P45 100.0 7.1E-61 2.4E-65  465.3  33.3  373   81-511    16-407 (408)
 44 2uuq_A CYP130, cytochrome P450 100.0 1.2E-61 4.2E-66  470.6  27.8  373   80-512    25-413 (414)
 45 4fb2_A P450CIN; heme, monooxyg 100.0 1.4E-61 4.8E-66  468.9  26.8  371   77-512    16-393 (398)
 46 2xkr_A CYP142, putative cytoch 100.0 4.4E-61 1.5E-65  465.4  30.2  374   80-512    18-394 (398)
 47 3nc3_A Cytochrome P450 CYPX; c 100.0 4.8E-62 1.6E-66  477.1  23.0  385   79-511    52-440 (441)
 48 2zbx_A Cytochrome P450-SU1; be 100.0 1.9E-60 6.4E-65  462.6  33.7  370   78-510    22-407 (412)
 49 1q5d_A P450 epoxidase; cytochr 100.0 4.1E-61 1.4E-65  468.3  29.0  377   78-512    24-416 (419)
 50 2z3t_A Cytochrome P450; monoxy 100.0 2.1E-61 7.1E-66  470.6  26.5  374   81-511    21-415 (425)
 51 2y5n_A MYCG, P-450-like protei 100.0 2.5E-60 8.4E-65  461.5  33.8  370   78-509    35-417 (417)
 52 3abb_A CYP105D6, cytochrome P4 100.0 6.6E-61 2.3E-65  465.5  27.8  370   80-512    24-407 (408)
 53 2dkk_A Cytochrome P450; CYP158 100.0 5.2E-61 1.8E-65  465.3  26.3  367   82-512    29-410 (411)
 54 2wm5_A CYP124, putative cytoch 100.0 5.2E-60 1.8E-64  461.8  31.7  373   81-509    45-434 (435)
 55 2z36_A MOXA, cytochrome P450 t 100.0 3.6E-60 1.2E-64  460.1  30.3  369   80-510    22-408 (413)
 56 3dsk_A Cytochrome P450 74A, ch 100.0 1.5E-61 5.2E-66  483.9  18.8  405   42-487    29-471 (495)
 57 3ivy_A Cytochrome P450 CYP125; 100.0 4.6E-60 1.6E-64  462.6  27.6  369   81-512    38-428 (433)
 58 3oft_A Cytochrome P450, CYP101 100.0 1.2E-59 4.1E-64  455.5  30.3  370   77-510    21-395 (396)
 59 3dan_A Cytochrome P450 74A2; A 100.0 6.4E-61 2.2E-65  476.9  21.8  405   42-487    10-453 (473)
 60 2xbk_A PIMD protein; epoxidati 100.0 3.6E-59 1.2E-63  451.0  33.0  362   80-509    26-404 (404)
 61 3r9b_A Cytochrome P450 164A2;  100.0 7.7E-60 2.6E-64  460.3  28.6  379   77-512    26-417 (418)
 62 3tyw_A Putative cytochrome P45 100.0 2.7E-59 9.4E-64  455.5  31.9  347   79-487    28-388 (417)
 63 3lxh_A Cytochrome P450; heme,  100.0 7.5E-60 2.6E-64  460.0  26.1  377   77-512    35-417 (421)
 64 3tkt_A Cytochrome P450; aromat 100.0   2E-59 6.8E-64  460.1  28.0  380   82-511    47-449 (450)
 65 3mgx_A Putative P450 monooxyge 100.0 1.5E-59 5.2E-64  455.3  26.2  368   80-512    37-415 (415)
 66 1n40_A P450 MT2, cytochrome P4 100.0 3.3E-59 1.1E-63  451.4  27.8  368   78-509    14-396 (396)
 67 3oo3_A OXY protein; cytochrome 100.0 1.8E-58 6.1E-63  445.5  31.2  365   77-509     9-384 (384)
 68 1lfk_A OXYB, P450 monooxygenas 100.0 5.2E-59 1.8E-63  450.6  24.6  340   85-487    18-375 (398)
 69 3rwl_A Cytochrome P450 alkane  100.0 8.7E-58   3E-62  444.9  32.2  373   81-511    39-426 (426)
 70 3b4x_A 367AA long hypothetical 100.0   3E-58   1E-62  439.7  24.5  349   84-511     3-366 (367)
 71 1io7_A Cytochrome P450 CYP119; 100.0 2.8E-57 9.6E-62  433.8  26.9  351   83-512     2-367 (368)
 72 3p3o_A Cytochrome P450; monoox 100.0 1.7E-57 5.6E-62  442.2  23.3  370   80-511    33-415 (416)
 73 2wiy_A XPLA-heme, cytochrome P 100.0 3.2E-56 1.1E-60  429.9  29.6  369   81-509    21-393 (394)
 74 2rfb_A Cytochrome P450; heme,  100.0 3.1E-57 1.1E-61  429.1  18.5  319   91-488     2-324 (343)
 75 4dnj_A Putative cytochrome P45 100.0 2.3E-53 7.7E-58  411.9  27.6  369   80-511    34-411 (412)
 76 4dxy_A Cytochrome P450, CYP101 100.0 1.9E-49 6.6E-54  383.3  24.2  371   80-509    37-413 (417)
 77 2yjn_B Erycii, DTDP-4-keto-6-d 100.0 1.8E-48 6.2E-53  367.7   3.5  333   42-508    35-380 (381)
 78 1m46_B IQ4, IQ4 motif from MYO  48.4      15 0.00051   17.7   2.1   12  342-353     8-19  (26)
 79 2diu_A KIAA0430 protein; struc  45.6      34  0.0012   24.2   4.5   35   85-120    29-64  (96)
 80 1s79_A Lupus LA protein; RRM,   29.2 1.4E+02  0.0049   21.1   6.0   40   84-123    26-73  (103)
 81 2krb_A Eukaryotic translation   28.7 1.3E+02  0.0044   19.8   5.7   38   84-121    22-66  (81)
 82 1whv_A Poly(A)-specific ribonu  27.5      49  0.0017   23.5   2.9   37   84-120    30-67  (100)
 83 2d9o_A DNAJ (HSP40) homolog, s  25.0 1.7E+02  0.0059   20.6   5.7   40   83-122    31-74  (100)
 84 1iqt_A AUF1, heterogeneous nuc  23.6 1.4E+02  0.0046   19.2   4.7   40   84-123    14-62  (75)
 85 2dgx_A KIAA0430 protein; RRM d  22.3 1.9E+02  0.0066   19.8   5.8   35   86-120    30-70  (96)
 86 3d2w_A TAR DNA-binding protein  22.2 1.5E+02  0.0052   20.1   4.9   35   84-118    26-64  (89)
 87 1sjq_A Polypyrimidine tract-bi  22.0 2.2E+02  0.0076   20.3   6.2   37   84-120    31-70  (105)
 88 3v4m_A Splicing factor U2AF 65  21.8 1.8E+02  0.0061   20.7   5.3   38   83-120    29-77  (105)
 89 1use_A VAsp, vasodilator-stimu  21.8 1.1E+02  0.0038   17.9   3.1   29  341-381    14-42  (45)
 90 3fgx_A Rbstp2171; structural g  20.8      60   0.002   23.7   2.4   17   85-101     9-25  (114)
 91 1nu4_A U1A RNA binding domain;  20.8 1.9E+02  0.0066   19.7   5.3   35   86-120    29-69  (97)
 92 1x5p_A Negative elongation fac  20.2 1.5E+02   0.005   20.4   4.5   38   84-121    28-68  (97)

No 1  
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=100.00  E-value=1.3e-77  Score=598.85  Aligned_cols=454  Identities=21%  Similarity=0.322  Sum_probs=367.0

Q ss_pred             HHHhHhhhcchhhhHHHHHHCCCCCCCCccCCCCHHHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCCeEEEe
Q 039293           21 IKLLNKIWWTPIRIQSQMRSQGIKGPSYKFFHGNNKEIINMKNEMIMSSSPMELSHQIFPITEPHIYSWIKLYGTNFLMW  100 (512)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~vf~~~  100 (512)
                      +.+++..+.+|++        .+|||+++|++||++.+....               ..++++..+.+|+++||+||+++
T Consensus        12 ~~~~~~~~~~pl~--------~~PGP~~~p~iG~~~~~~~~~---------------~~~~~~~~~~~l~~~YG~i~~~~   68 (482)
T 3k9v_A           12 CPLMTDGETRNVT--------DLPGPTNWPLLGSLLEIFWKG---------------GLKKQHDTLAEYHKKYGQIFRMK   68 (482)
T ss_dssp             -------CCEEGG--------GCCCSCCCTTTBTHHHHHHTT---------------CGGGHHHHHHHHHHHHCSEEEEE
T ss_pred             cccccccccCCCC--------CCCCCCCCCccccHHHHhccC---------------CcccHHHHHHHHHHHcCCEEEEc
Confidence            3455888999999        899999999999999986421               11245678999999999999999


Q ss_pred             cCCeeEEEecCHHHHHHHHhcCCCCCCCchh----hhHhh--hcCceeccCCchHHHHhhhhcCcC-CHHHHhhhHHHHH
Q 039293          101 HGSQAELVVAEPKLIKEIMNNNRSFPKREPR----EYLKL--LGNGLVTTRGEKWLKKRKLAVNAF-HAENLKNMIPDMI  173 (512)
Q Consensus       101 ~~~~~~vvv~dpe~i~~i~~~~~~~~~~~~~----~~~~~--~g~~l~~~~g~~w~~~Rr~~~~~~-~~~~l~~~~~~i~  173 (512)
                      +|+.+.|+++||+++++++.++..|.+++..    .....  .|.|+++.+|+.|+++||++.+.| +...+..+++.+.
T Consensus        69 ~g~~~~vvv~dp~~~~~il~~~~~~~~r~~~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~f~~~~~~~~~~~~i~  148 (482)
T 3k9v_A           69 LGSFDSVHLGSPSLLEALYRTESAHPQRLEIKPWKAYRDHRNEAYGLMILEGQEWQRVRSAFQKKLMKPVEIMKLDKKIN  148 (482)
T ss_dssp             ETTEEEEEECSHHHHHHHHHTCCSSCCCCCCHHHHHHHHHHTCCCCTTTCCHHHHHHHHHHHHHHHTCHHHHGGGHHHHH
T ss_pred             cCCCCEEEEcCHHHHHHHHHhcCCCCCCCCchHHHHHHHhcCCCCCceeCCCchHHHHHHHhhHHhcChHHHHHHHHHHH
Confidence            9999999999999999999886677655421    12222  357888899999999999999986 7888999999999


Q ss_pred             HHHHHHHHHHHhhc---CCcccHHHHHHHHhHhHhhhcccCccccccc-----cHHHHHHHHHHHHHHhhhhcccc-ccc
Q 039293          174 ASVDMMLERWRDYE---GKEIDAYREIKVLTSEIISRTAFGSCYLEGE-----NIFNMLTKMAYIVAKKKYKLEIP-GIG  244 (512)
Q Consensus       174 ~~~~~li~~l~~~~---~~~vd~~~~~~~~~~~~i~~~~fG~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~P-~l~  244 (512)
                      ++++++++.+.+..   ++++|+.+++..+++|+++.++||.+++..+     ........+...+........+| .+.
T Consensus       149 ~~~~~l~~~l~~~~~~~g~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~  228 (482)
T 3k9v_A          149 EVLADFLERMDELCDERGRIPDLYSELNKWSFESICLVLYEKRFGLLQKETEEEALTFITAIKTMMSTFGKMMVTPVELH  228 (482)
T ss_dssp             HHHHHHHHHHHHHCCTTSCCTTHHHHHHHHHHHHHHHHHHSCCCCSSSTTSTTSSHHHHHHHHHHHTTGGGGSSSCHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHcccccCCCCCCcchHHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence            99999999998753   2389999999999999999999999874211     11222222222221111222333 222


Q ss_pred             ccccCcchhhhHHHHHHHHHHHHHHHHHHhhhhhcccccccCCcHHHHHHHhccccccccCCCHHHHHHHHHHHHHhchh
Q 039293          245 KLLKTNDDIESDKLEQDIRDSIIKVVKKRESNVLTGEAESYGNDLLGILMRAYHSADETQKISLDDLIDECKTFYVAGTD  324 (512)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~  324 (512)
                      ++++....+...+..+.+.+.+.+.++++++..  .  .....|++..++..       ..++++++.+++.++++||+|
T Consensus       229 ~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~--~--~~~~~d~l~~ll~~-------~~l~~~ei~~~~~~~~~AG~d  297 (482)
T 3k9v_A          229 KRLNTKVWQAHTLAWDTIFKSVKPCIDNRLQRY--S--QQPGADFLCDIYQQ-------DHLSKKELYAAVTELQLAAVE  297 (482)
T ss_dssp             HHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHT--T--TCTTSCHHHHHHHH-------TCCCHHHHHHHHHHHHHHHHH
T ss_pred             HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--c--cCCchHHHHHHHhc-------cCCCHHHHHHHHHHHHHhhhh
Confidence            444444445566667778888888888877541  1  12346888888764       258999999999999999999


Q ss_pred             hhHHHHHHHHHHHhhChHHHHHHHHHHHHHhC-CCCCChhhhccchhHHHHHHhhhccCCCCccccceeccccccCCeee
Q 039293          325 TTASLLSWTIFLLAIHSDWQDKARKEVLELLG-QQNPSADNISRLKIVGMIINETLRLYPPFVVFVREVKKEVKLGDLIV  403 (512)
Q Consensus       325 tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~-~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~I  403 (512)
                      ||+++++|++++|++||++|+|+++||+++++ ++.++++++.+||||+|||+|+||++|++|.++|.+.+|++++||.|
T Consensus       298 Tta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~r~~~~d~~~~g~~i  377 (482)
T 3k9v_A          298 TTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTPRAEDLRNMPYLKACLKESMRLTPSVPFTTRTLDKPTVLGEYAL  377 (482)
T ss_dssp             HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCTTCCCCGGGGGGCHHHHHHHHHHHHHSCSCCEEEEECSSCEEETTEEE
T ss_pred             hHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHHhhCHHHHHHHHHHhhcCCCCcCcccccCCceeeCCEEE
Confidence            99999999999999999999999999999998 46789999999999999999999999999998999999999999999


Q ss_pred             CCCCEEEEccchhccCCCCcCCCCCCCCCCCCCCCCCccccCCCccccccCCCcccccchHHHHHHHHHHHHHHHhhcEE
Q 039293          404 PANVDVTIPVIAVHHDPQIWGEDFHLYKPERFAQGVPKATSNNMAAFLPFGLGPRTCVGFNFTIIEAKIALSMILRRYKF  483 (512)
Q Consensus       404 pkG~~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~la~ll~~f~~  483 (512)
                      ||||.|+++.+++||||++| +||++|+||||++.++.  ..+. .++|||.|+|.|+|++||++|++++++.||++|++
T Consensus       378 p~Gt~v~~~~~~~~~d~~~~-~~p~~F~PeRfl~~~~~--~~~~-~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~  453 (482)
T 3k9v_A          378 PKGTVLTLNTQVLGSSEDNF-EDSHKFRPERWLQKEKK--INPF-AHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYDI  453 (482)
T ss_dssp             CTTCEEEEECSGGGGCTTTC-SSTTSCCGGGGTCTTSC--CCGG-GCCTTCCSTTSCSCHHHHHHHHHHHHHHHHHHEEE
T ss_pred             CCCCEEEEccccccCCCccC-CCcCccCccccCCCCCC--CCCc-cccCCCCCCcCCccHHHHHHHHHHHHHHHHHhcEE
Confidence            99999999999999999999 99999999999986432  2334 89999999999999999999999999999999999


Q ss_pred             EeCCCCccCCCcceeeecCCCceEEEEeC
Q 039293          484 TLSPNYVHSPVPRITLCPQHGIQVMLRAL  512 (512)
Q Consensus       484 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  512 (512)
                      ++.++.+......++..|..+++|++++|
T Consensus       454 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~R  482 (482)
T 3k9v_A          454 VATDNEPVEMLHLGILVPSRELPIAFRPR  482 (482)
T ss_dssp             EESCCCCCCEEESSSEEESSSCCEEEEEC
T ss_pred             eccCCCCcccccceeecCCCCcceEEeeC
Confidence            99876554444567789999999999998


No 2  
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=100.00  E-value=2.3e-77  Score=592.25  Aligned_cols=433  Identities=18%  Similarity=0.278  Sum_probs=360.9

Q ss_pred             CCCCCCC-ccCCCCHHHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCCeEEEecCCeeEEEecCHHHHHHHHh
Q 039293           42 GIKGPSY-KFFHGNNKEIINMKNEMIMSSSPMELSHQIFPITEPHIYSWIKLYGTNFLMWHGSQAELVVAEPKLIKEIMN  120 (512)
Q Consensus        42 ~~Pgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~vf~~~~~~~~~vvv~dpe~i~~i~~  120 (512)
                      .||||++ +|++||++.+.+                    +++.++.++++|||+||++++++.++|+|+||+++++++.
T Consensus        12 ~PP~~~~~lP~iG~~~~~~~--------------------~~~~~~~~~~~kYG~i~~~~~~~~~~vvv~~~~~i~~il~   71 (461)
T 3ld6_A           12 SPPYIFSPIPFLGHAIAFGK--------------------SPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFN   71 (461)
T ss_dssp             CCCBCCCSSTTTBTHHHHHH--------------------CHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHH
T ss_pred             CCCCCCCCcCeeeeHHHhhh--------------------CHHHHHHHHHHHhCCEEEEEECCccEEEEeCHHHHHHHHh
Confidence            5677765 899999999864                    3356899999999999999999999999999999999998


Q ss_pred             cCC-CCCCCchhh--hHhhhcCceec-cCCchHHHHhhhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhcCCcccHHHH
Q 039293          121 NNR-SFPKREPRE--YLKLLGNGLVT-TRGEKWLKKRKLAVNAFHAENLKNMIPDMIASVDMMLERWRDYEGKEIDAYRE  196 (512)
Q Consensus       121 ~~~-~~~~~~~~~--~~~~~g~~l~~-~~g~~w~~~Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~~~~vd~~~~  196 (512)
                      .++ .|.+++...  ...++|.++++ .+|+.|+++|+++.+.|+...++.+.+.+.+.++++++.|.+.  +.+|+.+.
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~~~~~~~~~--~~~~~~~~  149 (461)
T 3ld6_A           72 SKNEDLNAEDVYSRLTTPVFGKGVAYDVPNPVFLEQKKMLKSGLNIAHFKQHVSIIEKETKEYFESWGES--GEKNVFEA  149 (461)
T ss_dssp             CCTTTEESHHHHHHHHHHHHCTTSGGGSCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHGGGGCSE--EEEEHHHH
T ss_pred             CCccccCCCcchhhhhhccCCCccccCCCcHHHHHHHHhccccccHHHHhhhhHHHHHHHHHHHHHHhhc--CCccHHHH
Confidence            876 666655433  45677888765 6799999999999999999999999999999999999888643  58999999


Q ss_pred             HHHHhHhHhhhcccCccccccccHHHHHHHHHHHHHHhhh--hcccccccccccCcchhhhHHHHHHHHHHHHHHHHHHh
Q 039293          197 IKVLTSEIISRTAFGSCYLEGENIFNMLTKMAYIVAKKKY--KLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKVVKKRE  274 (512)
Q Consensus       197 ~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~  274 (512)
                      +..++.++++.++||.++.....  +........+.....  ...+|   .+++.....+..++.+.+.+++.+.+++++
T Consensus       150 ~~~~~~~~i~~~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~  224 (461)
T 3ld6_A          150 LSELIILTASHCLHGKEIRSQLN--EKVAQLYADLDGGFSHAAWLLP---GWLPLPSFRRRDRAHREIKDIFYKAIQKRR  224 (461)
T ss_dssp             HHHHHHHHHHHHHTCHHHHHTCC--HHHHHHHHHHHTTSSHHHHHSC---TTSCCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHcCcchhhhhh--hhhhhhhhhhhhhhhhHHHhhh---hhccCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999987653221  111112222221111  11223   334444556677788888999999888877


Q ss_pred             hhhhcccccccCCcHHHHHHHhccccccccCCCHHHHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHHHHHHH
Q 039293          275 SNVLTGEAESYGNDLLGILMRAYHSADETQKISLDDLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARKEVLEL  354 (512)
Q Consensus       275 ~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~  354 (512)
                      .+      .+...|+++.++++..++  +..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++
T Consensus       225 ~~------~~~~~d~l~~ll~~~~~~--~~~ls~~ei~~~~~~~~~aG~dTt~~~l~~~l~~L~~~P~~q~kl~~Ei~~v  296 (461)
T 3ld6_A          225 QS------QEKIDDILQTLLDATYKD--GRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTV  296 (461)
T ss_dssp             TC------CCCCCSHHHHHHTCBCTT--SCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred             hc------CCCCcchhhhhHHhhhcc--cCCCCHHHHHHHHHhhhhcccccccccchhhhcccccChHHHHHHHHHHHHH
Confidence            65      345679999999876654  5679999999999999999999999999999999999999999999999999


Q ss_pred             hCC--CCCChhhhccchhHHHHHHhhhccCCCCccccceeccccccCCeeeCCCCEEEEccchhccCCCCcCCCCCCCCC
Q 039293          355 LGQ--QNPSADNISRLKIVGMIINETLRLYPPFVVFVREVKKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGEDFHLYKP  432 (512)
Q Consensus       355 ~~~--~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~p~~F~P  432 (512)
                      +++  ...+.+++++||||+|||+|+||++|+++...|.+.+|++++||.||||+.|+++.+++||||++| +||++|+|
T Consensus       297 ~~~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~-~dP~~F~P  375 (461)
T 3ld6_A          297 CGENLPPLTYDQLKDLNLLDRCIKETLRLRPPIMIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSW-VERLDFNP  375 (461)
T ss_dssp             HCTTCCCCCHHHHHTCHHHHHHHHHHHHHSCSCCCEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTC-TTTTSCCG
T ss_pred             hcccccchhHHHHHHHhhhhheeeeccccCCchhccccccccceeeCCcccCCCCeeeechHhhcCCcccc-CCccccCc
Confidence            984  457899999999999999999999999999999999999999999999999999999999999999 99999999


Q ss_pred             CCCCCCCCccccCCCccccccCCCcccccchHHHHHHHHHHHHHHHhhcEEEeCCCCccCCCcceeeecCCCceEEEEeC
Q 039293          433 ERFAQGVPKATSNNMAAFLPFGLGPRTCVGFNFTIIEAKIALSMILRRYKFTLSPNYVHSPVPRITLCPQHGIQVMLRAL  512 (512)
Q Consensus       433 ~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  512 (512)
                      |||+++++. ..++. .|+|||+|+|.|+|++||++|+++++|.||++|+|+++++..+......++.+..+++|++++|
T Consensus       376 eRfl~~~~~-~~~~~-~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~l~~~~~~~~~~~~~~~~p~~~~v~~~~R  453 (461)
T 3ld6_A          376 DRYLQDNPA-SGEKF-AYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYFPTVNYTTMIHTPENPVIRYKRR  453 (461)
T ss_dssp             GGGGSCCHH-HHSSS-SSCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEECSTTCCCCBCCSSSSCCBSSCEEEEEEC
T ss_pred             cccCCCCcc-cCCCC-ccccCCCcCcCChhHHHHHHHHHHHHHHHHHhCEEEeCCCCCCcccccceEEcCCceEEEEEEC
Confidence            999987432 23445 7999999999999999999999999999999999999877555443334445556899999998


No 3  
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A*
Probab=100.00  E-value=2.1e-76  Score=581.91  Aligned_cols=439  Identities=23%  Similarity=0.336  Sum_probs=359.4

Q ss_pred             HhHhhhcchhhhHHHHHHCCCCCCCCccCCCCHHHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCCeEEEecC
Q 039293           23 LLNKIWWTPIRIQSQMRSQGIKGPSYKFFHGNNKEIINMKNEMIMSSSPMELSHQIFPITEPHIYSWIKLYGTNFLMWHG  102 (512)
Q Consensus        23 ~~~~~~~~~~~~~~~~~~~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~vf~~~~~  102 (512)
                      ++|.+++++.+        .+|||+++|++||++.+..                    +.+ ++.+++++||+||+++++
T Consensus         2 ~~yp~~~~~~~--------~pPgp~~~P~iG~~~~~~~--------------------~~~-~~~~~~~~yg~v~~~~~~   52 (444)
T 2ve3_A            2 ITSPTNLNSLP--------IPPGDFGLPWLGETLNFLN--------------------DGD-FGKKRQQQFGPIFKTRLF   52 (444)
T ss_dssp             -------CCCC--------CCCCCCCBTTTBTHHHHHH--------------------CTT-HHHHHHHHHCSSEEEEET
T ss_pred             ccCCCCCCCCC--------CCCCCCCCCccccHHHHhc--------------------CcH-HHHHHHHHcCCeEEEeeC
Confidence            46777787877        8999999999999998853                    223 678999999999999988


Q ss_pred             CeeEEEecCHHHHHHHHhcCC-CCCCCchhhhHhhhcC-ceeccCCchHHHHhhhhcCcCCHHHHhhhHHHHHHHHHHHH
Q 039293          103 SQAELVVAEPKLIKEIMNNNR-SFPKREPREYLKLLGN-GLVTTRGEKWLKKRKLAVNAFHAENLKNMIPDMIASVDMML  180 (512)
Q Consensus       103 ~~~~vvv~dpe~i~~i~~~~~-~~~~~~~~~~~~~~g~-~l~~~~g~~w~~~Rr~~~~~~~~~~l~~~~~~i~~~~~~li  180 (512)
                      +.+.++++||+.+++++.+++ .|..........++|. ++++.+|+.|+++|+++.+.|+.++++.+.+.+++++++++
T Consensus        53 g~~~vvv~~~~~~~~il~~~~~~~~~~~~~~~~~~~g~~~l~~~~g~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~  132 (444)
T 2ve3_A           53 GKNVIFISGALANRFLFTKEQETFQATWPLSTRILLGPNALATQMGEIHRSRRKILYQAFLPRTLDSYLPKMDGIVQGYL  132 (444)
T ss_dssp             TEEEEEECSHHHHHHHTSSCTTTEEEECCHHHHHHHCTTSGGGCCHHHHHHHHHHHHGGGCHHHHHTTHHHHHHHHHHHH
T ss_pred             CCCEEEEcCHHHHHHHHhCCCcccccchhHHHHHHhCccccccCCchHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHH
Confidence            888999999999999998875 4653222224455675 88888999999999999999999999999999999999999


Q ss_pred             HHHHhhcCCcccHHHHHHHHhHhHhhhcccCcccccc-ccHHHHHHHHHHHHHHhhhhcccccccccccCcchhhhHHHH
Q 039293          181 ERWRDYEGKEIDAYREIKVLTSEIISRTAFGSCYLEG-ENIFNMLTKMAYIVAKKKYKLEIPGIGKLLKTNDDIESDKLE  259 (512)
Q Consensus       181 ~~l~~~~~~~vd~~~~~~~~~~~~i~~~~fG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~  259 (512)
                      +.|.+  ++++|+.+++..+++++++.++|| ..... +.+.+.+..+...    ..  .+|   ..+|....++..++.
T Consensus       133 ~~l~~--~~~vd~~~~~~~~~~~vi~~~~fG-~~~~~~~~~~~~~~~~~~~----~~--~~~---~~~p~~~~~~~~~~~  200 (444)
T 2ve3_A          133 EQWGK--ANEVIWYPQLRRMTFDVAATLFMG-EKVSQNPQLFPWFETYIQG----LF--SLP---IPLPNTLFGKSQRAR  200 (444)
T ss_dssp             HHHHH--SSEEEHHHHHHHHHHHHHHHHHTC-HHHHSCTTHHHHHHHHHHH----HS--SCC---CCSTTSHHHHHHHHH
T ss_pred             HHhcC--CCcEeHHHHHHHHHHHHHHHHHcC-CCcccHHHHHHHHHHHHHH----Hh--cCC---ccCCCcHHHHHHHHH
Confidence            99964  368999999999999999999999 33221 2333333222211    11  112   123332334566777


Q ss_pred             HHHHHHHHHHHHHHhhhhhcccccccCCcHHHHHHHhccccccccCCCHHHHHHHHHHHHHhchhhhHHHHHHHHHHHhh
Q 039293          260 QDIRDSIIKVVKKRESNVLTGEAESYGNDLLGILMRAYHSADETQKISLDDLIDECKTFYVAGTDTTASLLSWTIFLLAI  339 (512)
Q Consensus       260 ~~~~~~l~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~  339 (512)
                      +.+.+++.+.+++++++      .....|+++.++++..++  +..++++++.+++.++++||+|||+++++|++++|++
T Consensus       201 ~~~~~~~~~~i~~r~~~------~~~~~d~l~~ll~~~~~~--~~~l~~~~i~~~~~~~~~AG~~Tt~~~l~~~l~~L~~  272 (444)
T 2ve3_A          201 ALLLAELEKIIKARQQQ------PPSEEDALGILLAARDDN--NQPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQ  272 (444)
T ss_dssp             HHHHHHHHHHHHHHHTS------CCCCSSHHHHHHHCBCTT--SCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcC------CCCccCHHHHHHhccccC--CCCCCHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHH
Confidence            88888999999887754      224579999999875432  4569999999999999999999999999999999999


Q ss_pred             ChHHHHHHHHHHHHHhCCCCCChhhhccchhHHHHHHhhhccCCCCccccceeccccccCCeeeCCCCEEEEccchhccC
Q 039293          340 HSDWQDKARKEVLELLGQQNPSADNISRLKIVGMIINETLRLYPPFVVFVREVKKEVKLGDLIVPANVDVTIPVIAVHHD  419 (512)
Q Consensus       340 ~p~~~~~l~~Ei~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d  419 (512)
                      ||++|+|+++|+++++++..++++++.+||||+|||+|+||++|+++.++|.+.+|++++||.||||+.|+++.+++|||
T Consensus       273 ~P~~~~~l~~Ei~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rd  352 (444)
T 2ve3_A          273 HSDIRERVRQEQNKLQLSQELTAETLKKMPYLDQVLQEVLRLIPPVGGGFRELIQDCQFQGFHFPKGWLVSYQISQTHAD  352 (444)
T ss_dssp             CHHHHHHHHHHHHSSCCSSCCCHHHHTTCHHHHHHHHHHHHHSCSSCEEEEEESSCEEETTEEECTTCEEEEEHHHHTTC
T ss_pred             CHHHHHHHHHHHHHhccCCCCChhhhhcChHHHHHHHHHHhcCCCccCccceeCCCeeECCEEECCCCEEEechHHhcCC
Confidence            99999999999999988778999999999999999999999999999889999999999999999999999999999999


Q ss_pred             CCCcCCCCCCCCCCCCCCCCCccccCCCccccccCCCcccccchHHHHHHHHHHHHHHHhhcEEEeCCCCccCCCcceee
Q 039293          420 PQIWGEDFHLYKPERFAQGVPKATSNNMAAFLPFGLGPRTCVGFNFTIIEAKIALSMILRRYKFTLSPNYVHSPVPRITL  499 (512)
Q Consensus       420 ~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~  499 (512)
                      |++| +||++|+||||++.+......+. .++|||+|+|.|+|++||++|++++++.|+++|++++.++.........+.
T Consensus       353 p~~~-~dP~~F~PeR~l~~~~~~~~~~~-~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~  430 (444)
T 2ve3_A          353 PDLY-PDPEKFDPERFTPDGSATHNPPF-AHVPFGGGLRECLGKEFARLEMKLFATRLIQQFDWTLLPGQNLELVVTPSP  430 (444)
T ss_dssp             TTTS-SSTTSCCGGGSSTTSTTTTSCTT-SCCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEEECSSCCCCEEESSSE
T ss_pred             hhhc-CCcCccCccccCCCCcccCCCCc-eeeCCCCCCccCccHHHHHHHHHHHHHHHHHhCEEEeCCCCCcceeccccc
Confidence            9999 99999999999975332223344 699999999999999999999999999999999999977644433345677


Q ss_pred             ecCCCceEEEEeC
Q 039293          500 CPQHGIQVMLRAL  512 (512)
Q Consensus       500 ~~~~~~~v~~~~r  512 (512)
                      .|..+++|++++|
T Consensus       431 ~~~~~l~v~~~~r  443 (444)
T 2ve3_A          431 RPKDNLRVKLHSL  443 (444)
T ss_dssp             EETTCCEEEEEEC
T ss_pred             cCCCCceEEEEeC
Confidence            8999999999987


No 4  
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=100.00  E-value=3.4e-76  Score=588.71  Aligned_cols=445  Identities=24%  Similarity=0.409  Sum_probs=349.4

Q ss_pred             HHHCCCCCCCCccCCCCHHHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCCeEEEecCCeeEEEecCHHHHHH
Q 039293           38 MRSQGIKGPSYKFFHGNNKEIINMKNEMIMSSSPMELSHQIFPITEPHIYSWIKLYGTNFLMWHGSQAELVVAEPKLIKE  117 (512)
Q Consensus        38 ~~~~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~vf~~~~~~~~~vvv~dpe~i~~  117 (512)
                      ++++++|||+++|++||++.+.+                    +.+.++.+|+++||+||++++|+.++|+|+||+++++
T Consensus        11 ~k~~~~PGP~~~PliGn~~~~~~--------------------~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~   70 (485)
T 3nxu_A           11 FKKLGIPGPTPLPFLGNILSYHK--------------------GFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKT   70 (485)
T ss_dssp             HHHHTCCCCCCBTTTBTGGGGGG--------------------CHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHH
T ss_pred             HhhCCCCCCCCcCeecCcHHhhc--------------------ChHHHHHHHHHHcCCeEEEEeCCCCEEEECCHHHHHH
Confidence            34558999999999999987732                    3356789999999999999999999999999999999


Q ss_pred             HHhcC-C-CCCCCchhhhHhhhcCceeccCCchHHHHhhhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhh--cCCcccH
Q 039293          118 IMNNN-R-SFPKREPREYLKLLGNGLVTTRGEKWLKKRKLAVNAFHAENLKNMIPDMIASVDMMLERWRDY--EGKEIDA  193 (512)
Q Consensus       118 i~~~~-~-~~~~~~~~~~~~~~g~~l~~~~g~~w~~~Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~--~~~~vd~  193 (512)
                      ++.++ . .|..+.........+.++++.+|+.|+++|+++++.|+.+.++.+.+.+.+.++++++.+.+.  .++++|+
T Consensus        71 il~~~~~~~f~~r~~~~~~~~~~~~l~~~~g~~w~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~g~~~d~  150 (485)
T 3nxu_A           71 VLVKECYSVFTNRRPFGPVGFMKSAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTL  150 (485)
T ss_dssp             HHTTTTTTTCCCCCCCSCCGGGGGSTTTCCHHHHHHHHHHHGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEH
T ss_pred             HHhccchhhccCCcccccccccccCccccCCcHHHHHHhhcChhcCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcCcH
Confidence            99876 3 565444322223567788889999999999999999999999999999999999999999753  2458999


Q ss_pred             HHHHHHHhHhHhhhcccCccccccc----cHHHHHHHHHHHH---HHhhhhccccccc---ccccCcchhhhHHHHHHHH
Q 039293          194 YREIKVLTSEIISRTAFGSCYLEGE----NIFNMLTKMAYIV---AKKKYKLEIPGIG---KLLKTNDDIESDKLEQDIR  263 (512)
Q Consensus       194 ~~~~~~~~~~~i~~~~fG~~~~~~~----~~~~~~~~~~~~~---~~~~~~~~~P~l~---~~~~~~~~~~~~~~~~~~~  263 (512)
                      .+++..+++|+++.++||.+++..+    .+.+.........   ........+|++.   ..++..  .......+.+.
T Consensus       151 ~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~--~~~~~~~~~~~  228 (485)
T 3nxu_A          151 KDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNIC--VFPREVTNFLR  228 (485)
T ss_dssp             HHHHHHHHHHHHHHHHHSCCCCGGGCTTCHHHHHHTTSCCCCTTSHHHHHHHHCTTHHHHHHHTTCC--SSCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHhchhhHHHHHHHHHHhhhhHHHHHHhhhh--hchHHHHHHHH
Confidence            9999999999999999999876422    1222111100000   0000111223221   111111  11223444455


Q ss_pred             HHHHHHHHHHhhhhhcccccccCCcHHHHHHHhcccc--ccccCCCHHHHHHHHHHHHHhchhhhHHHHHHHHHHHhhCh
Q 039293          264 DSIIKVVKKRESNVLTGEAESYGNDLLGILMRAYHSA--DETQKISLDDLIDECKTFYVAGTDTTASLLSWTIFLLAIHS  341 (512)
Q Consensus       264 ~~l~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~--~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p  341 (512)
                      +.+++.++++...     ......|+++.+++...+.  +.+..++++++.+++.++++||+|||+++++|++++|++||
T Consensus       229 ~~~~~~~~~~~~~-----~~~~~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P  303 (485)
T 3nxu_A          229 KSVKRMKESRLED-----TQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHP  303 (485)
T ss_dssp             HHHHHHHHHHHHC-----C---CCCHHHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCH
T ss_pred             HHHHHHHHHHHhc-----cCCCcccHHHHHHHhhhccccccccCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCH
Confidence            5555555544322     1234679999999875433  12456999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhC-CCCCChhhhccchhHHHHHHhhhccCCCCccccceeccccccCCeeeCCCCEEEEccchhccCC
Q 039293          342 DWQDKARKEVLELLG-QQNPSADNISRLKIVGMIINETLRLYPPFVVFVREVKKEVKLGDLIVPANVDVTIPVIAVHHDP  420 (512)
Q Consensus       342 ~~~~~l~~Ei~~~~~-~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~  420 (512)
                      ++|+|+++|++++++ ++.++++++.+||||+|||+|+||++|+++.++|.+.+|++++||.|||||.|+++.+++||||
T Consensus       304 ~~~~kl~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~Ip~Gt~V~~~~~~~~~d~  383 (485)
T 3nxu_A          304 DVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDP  383 (485)
T ss_dssp             HHHHHHHHHHHHHSTTTCCCCHHHHHHCHHHHHHHHHHHHHSCSCSCEEEECCSCEEETTEEECTTCEEEECHHHHHTCT
T ss_pred             HHHHHHHHHHHHHhccCCCCCHHHHhcChHHHHHHHHHHhcCCCccCcceeeCCCeeECCEEECCCCEEEEchHHhcCCh
Confidence            999999999999998 5678999999999999999999999999998899999999999999999999999999999999


Q ss_pred             CCcCCCCCCCCCCCCCCCCCccccCCCccccccCCCcccccchHHHHHHHHHHHHHHHhhcEEEeCCCCcc--CCCccee
Q 039293          421 QIWGEDFHLYKPERFAQGVPKATSNNMAAFLPFGLGPRTCVGFNFTIIEAKIALSMILRRYKFTLSPNYVH--SPVPRIT  498 (512)
Q Consensus       421 ~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~--~~~~~~~  498 (512)
                      ++| +||++|+||||+++++ ...++. .++|||.|+|.|+|++||++|++++++.|+++|++++.++...  ......+
T Consensus       384 ~~~-~dp~~F~PeR~l~~~~-~~~~~~-~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~  460 (485)
T 3nxu_A          384 KYW-TEPEKFLPERFSKKNK-DNIDPY-IYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLGGL  460 (485)
T ss_dssp             TTC-SSTTSCCGGGGSHHHH-TTSCTT-TCCTTCCSTTSCTTHHHHHHHHHHHHHHHHTTEEEECCTTCCSSCCBCSSSS
T ss_pred             hhc-CCccCcCccccCCCcc-ccCCCC-CccCCCCCCcCCchHHHHHHHHHHHHHHHHHhcEEEeCCCCCCCcccCCCee
Confidence            999 9999999999997522 222344 7999999999999999999999999999999999999765322  2234566


Q ss_pred             eecCCCceEEEEeC
Q 039293          499 LCPQHGIQVMLRAL  512 (512)
Q Consensus       499 ~~~~~~~~v~~~~r  512 (512)
                      +.|+.+++|++++|
T Consensus       461 ~~p~~~~~~~~~~r  474 (485)
T 3nxu_A          461 LQPEKPVVLKVESR  474 (485)
T ss_dssp             CCBSSCCEEEEEEC
T ss_pred             ccCCCCeEEEEEEc
Confidence            78999999999987


No 5  
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=100.00  E-value=3.1e-75  Score=582.73  Aligned_cols=447  Identities=19%  Similarity=0.346  Sum_probs=359.9

Q ss_pred             CCCCCCCCccCCCCHHHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCCeEEEecCCeeEEEecCHHHHHHHHh
Q 039293           41 QGIKGPSYKFFHGNNKEIINMKNEMIMSSSPMELSHQIFPITEPHIYSWIKLYGTNFLMWHGSQAELVVAEPKLIKEIMN  120 (512)
Q Consensus        41 ~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~vf~~~~~~~~~vvv~dpe~i~~i~~  120 (512)
                      +.||||+++|++||++.+.+                  .+.++..+.+|+++||+||++++|+.++|+|+||+++++++.
T Consensus         8 ~~PPgP~~lPliGnl~~l~~------------------~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~~k~il~   69 (494)
T 3swz_A            8 KYPKSLLSLPLVGSLPFLPR------------------HGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLI   69 (494)
T ss_dssp             ----CCBCCCEEEEESSCTT------------------SSCHHHHHHHTHHHHCSEEEEEETTEEEEEECSHHHHHHHHT
T ss_pred             CCCCCCCCCCeEcchHHhCC------------------CCchhHHHHHHHHHcCCEEEEEeCCCCEEEECCHHHHHHHHH
Confidence            36899999999999986521                  023467789999999999999999999999999999999998


Q ss_pred             cCC-CCCCCchhhhHhhh---cCceeccC-CchHHHHhhhhcCcCCH--HHHhhhHHHHHHHHHHHHHHHHhhcCCcccH
Q 039293          121 NNR-SFPKREPREYLKLL---GNGLVTTR-GEKWLKKRKLAVNAFHA--ENLKNMIPDMIASVDMMLERWRDYEGKEIDA  193 (512)
Q Consensus       121 ~~~-~~~~~~~~~~~~~~---g~~l~~~~-g~~w~~~Rr~~~~~~~~--~~l~~~~~~i~~~~~~li~~l~~~~~~~vd~  193 (512)
                      ++. .|..++........   +.|+++.+ |+.|+++||++.+.|+.  ..+..+.+.+.++++.+++.+.+..++++|+
T Consensus        70 ~~~~~f~~rp~~~~~~~~~~~~~gl~~~~~g~~wr~~Rr~~~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~  149 (494)
T 3swz_A           70 KKGKDFSGRPQMATLDIASNNRKGIAFADSGAHWQLHRRLAMATFALFKDGDQKLEKIICQEISTLCDMLATHNGQSIDI  149 (494)
T ss_dssp             TTTTTTBBCCCCHHHHHHTTTTCSSSSSCSSHHHHHHHHHHHHHTTTTSSSTTCHHHHHHHHHHHHHHHHHHTTTEEECC
T ss_pred             hCcHhhCCCCCcHHHHHhccCCCCeEeCCCCHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHcCCCcccH
Confidence            876 77655543322332   45776665 99999999999998864  4567899999999999999998754558999


Q ss_pred             HHHHHHHhHhHhhhcccCccccccccHHHHHHHHHHHHHHh----hhhcccccccccccCcchhhhHHHHHHHHHHHHHH
Q 039293          194 YREIKVLTSEIISRTAFGSCYLEGENIFNMLTKMAYIVAKK----KYKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKV  269 (512)
Q Consensus       194 ~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~  269 (512)
                      ...+..++.|+|+.++||.+++.++........+...+...    .....+|++ +++|....+...+..+.+.+++...
T Consensus       150 ~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l-~~~p~~~~~~~~~~~~~~~~~~~~~  228 (494)
T 3swz_A          150 SFPVFVAVTNVISLICFNTSYKNGDPELNVIQNYNEGIIDNLSKDSLVDLVPWL-KIFPNKTLEKLKSHVKIRNDLLNKI  228 (494)
T ss_dssp             HHHHHHHHHHHHHHHHHSCCCCTTCTHHHHHHHHHHHHHHHHCSSSSCCSSCGG-GTSCCSHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCcCCCCCHHHHHHHHHHHHHHHhcccchHHHHHHHH-HHcCcHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999998876555444443333322221    234456877 6777665566677777778888888


Q ss_pred             HHHHhhhhhcccccccCCcHHHHHHHhccccc--------cccCCCHHHHHHHHHHHHHhchhhhHHHHHHHHHHHhhCh
Q 039293          270 VKKRESNVLTGEAESYGNDLLGILMRAYHSAD--------ETQKISLDDLIDECKTFYVAGTDTTASLLSWTIFLLAIHS  341 (512)
Q Consensus       270 i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~--------~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p  341 (512)
                      ++++++.  ..  .....|+++.++++..+.+        .+..++++++..++.++++||+|||+++++|++++|++||
T Consensus       229 i~~~~~~--~~--~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P  304 (494)
T 3swz_A          229 LENYKEK--FR--SDSITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNP  304 (494)
T ss_dssp             HHHHTTT--CC--TTCCCSHHHHHHHHHHTSCCC----CCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
T ss_pred             HHHHHHh--hc--ccchhHHHHHHHHHHHhhhcccccccccccccCHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhCH
Confidence            8777654  11  2345799999998653210        1245899999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhC-CCCCChhhhccchhHHHHHHhhhccCCCCcc-ccceeccccccCCeeeCCCCEEEEccchhccC
Q 039293          342 DWQDKARKEVLELLG-QQNPSADNISRLKIVGMIINETLRLYPPFVV-FVREVKKEVKLGDLIVPANVDVTIPVIAVHHD  419 (512)
Q Consensus       342 ~~~~~l~~Ei~~~~~-~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d  419 (512)
                      ++|+|+++||+++++ ++.++++++.+||||+|||+|+||++|++|. ++|.+.+|++++||.|||||.|+++.+++|||
T Consensus       305 ~~q~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d  384 (494)
T 3swz_A          305 QVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHN  384 (494)
T ss_dssp             HHHHHHHHHHHHHTCSSSCCCGGGGGTCHHHHHHHHHHHHHSCSSTTCSCEECSSSEEETTEEECTTCEEEECHHHHHHC
T ss_pred             HHHHHHHHHHHHhcCCCCCCCHHHHhcCHHHHHHHHHHHHhcCCcccccceecCCCceECCEEeCCCCEEEEehHHhhCC
Confidence            999999999999998 5678999999999999999999999999998 48999999999999999999999999999999


Q ss_pred             CCCcCCCCCCCCCCCCCCCCCccccCCCccccccCCCcccccchHHHHHHHHHHHHHHHhhcEEEeCCCCccCC---Ccc
Q 039293          420 PQIWGEDFHLYKPERFAQGVPKATSNNMAAFLPFGLGPRTCVGFNFTIIEAKIALSMILRRYKFTLSPNYVHSP---VPR  496 (512)
Q Consensus       420 ~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~~~---~~~  496 (512)
                      |++| +||++|+||||+++++.....+...++|||.|+|.|+|++||++|++++++.||++|+|+++++.....   ..+
T Consensus       385 ~~~~-~dp~~F~PeRfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~  463 (494)
T 3swz_A          385 EKEW-HQPDQFMPERFLNPAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQLPSLEGIPK  463 (494)
T ss_dssp             TTTS-SSTTSCCGGGGBCTTSSSBCCCCSCCCTTCCGGGSCSCHHHHHHHHHHHHHHHHHHEEEECCSSCCCCCCSCEES
T ss_pred             cccC-CCcccCCcccccCCCCccccCCCCcccCCCCCCCCCCcHHHHHHHHHHHHHHHHHhcEEeeCCCCCCCCCCCccc
Confidence            9999 999999999999875433322323799999999999999999999999999999999999876532221   123


Q ss_pred             eeeecCCCceEEEEeC
Q 039293          497 ITLCPQHGIQVMLRAL  512 (512)
Q Consensus       497 ~~~~~~~~~~v~~~~r  512 (512)
                      .+..| .+++|++++|
T Consensus       464 ~~~~p-~~~~v~~~~R  478 (494)
T 3swz_A          464 VVFLI-DSFKVKIKVR  478 (494)
T ss_dssp             SSEEC-CCCCEEEEEC
T ss_pred             eeecC-CCcEEEEEEc
Confidence            44444 6799999998


No 6  
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=100.00  E-value=2.2e-74  Score=578.39  Aligned_cols=438  Identities=18%  Similarity=0.278  Sum_probs=354.6

Q ss_pred             CCCCCCCCccCCCCHHHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCCeEEEecCCeeEEEecCHHHHHHHHh
Q 039293           41 QGIKGPSYKFFHGNNKEIINMKNEMIMSSSPMELSHQIFPITEPHIYSWIKLYGTNFLMWHGSQAELVVAEPKLIKEIMN  120 (512)
Q Consensus        41 ~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~vf~~~~~~~~~vvv~dpe~i~~i~~  120 (512)
                      +.+|||+++|++||++.+.+....                ..+..+.+|+++||+||++++|+.+.|+++||++++++++
T Consensus        45 ~~pPGP~~~P~iGnl~~~~~~~~~----------------~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~il~  108 (503)
T 3s79_A           45 SSIPGPGYCMGIGPLISHGRFLWM----------------GIGSACNYYNRVYGEFMRVWISGEETLIISKSSSMFHIMK  108 (503)
T ss_dssp             CCCCSCCCCSSSHHHHHHHHHHHH----------------CHHHHHHHHHHHSCSEEEEESSSSEEEEECCHHHHHHHHH
T ss_pred             CCCCCCCCCceeeehhcccccccc----------------chhHHHHHHHHHhCCeEEEEeCCccEEEECCHHHHHHHHh
Confidence            389999999999999998542221                2245788999999999999999999999999999999997


Q ss_pred             cCCCCCCCch-hhhHh---hhcCceec-cCCchHHHHhhhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhc--CCcccH
Q 039293          121 NNRSFPKREP-REYLK---LLGNGLVT-TRGEKWLKKRKLAVNAFHAENLKNMIPDMIASVDMMLERWRDYE--GKEIDA  193 (512)
Q Consensus       121 ~~~~~~~~~~-~~~~~---~~g~~l~~-~~g~~w~~~Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~--~~~vd~  193 (512)
                      ++ .|..+.. .....   ..|.++++ .+|+.|+++||++.+.|+..+++++.+.+.++++++++.|.+..  ++++|+
T Consensus       109 ~~-~~~~r~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~f~~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~vdl  187 (503)
T 3s79_A          109 HN-HYSSRFGSKLGLQCIGMHEKGIIFNNNPELWKTTRPFFMKALSGPGLVRMVTVCAESLKTHLDRLEEVTNESGYVDV  187 (503)
T ss_dssp             SG-GGCCCCCCHHHHHHHTCTTSSSTTCCCHHHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHTTGGGTBCTTSCBCH
T ss_pred             cC-CCCCcchhhhhhhhhccCCCceeeCCCccHHHHHHHhhhHhhChHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEcH
Confidence            54 3443322 22222   33566654 56899999999999999999999999999999999999887643  348999


Q ss_pred             HHHHHHHhHhHhhhcccCccccccccHHHHHHHHHHHHHHhhhhcccccccccccCcchhhhHHHHHHHHHHHHHHHHHH
Q 039293          194 YREIKVLTSEIISRTAFGSCYLEGENIFNMLTKMAYIVAKKKYKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKVVKKR  273 (512)
Q Consensus       194 ~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~  273 (512)
                      .+++..++.++++.++||.+.+++ +................   ..|.+...++ +..++..++.+.+.+++.+.++++
T Consensus       188 ~~~~~~~~~~vi~~~~fG~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~  262 (503)
T 3s79_A          188 LTLLRRVMLDTSNTLFLRIPLDES-AIVVKIQGYFDAWQALL---IKPDIFFKIS-WLYKKYEKSVKDLKDAIEVLIAEK  262 (503)
T ss_dssp             HHHHHHHHHHHHHHHHTCCCCCHH-HHHHHHHHHHHHHHHHT---TCCHHHHHSG-GGTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCcccCch-hHHHHHHHHHHHHHHHh---cCcHHHhhcc-hhHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999988532 22333333322222211   1121111112 223566778888999999999888


Q ss_pred             hhhhhcccccccCCcHHHHHHHhccccccccCCCHHHHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHHHHHH
Q 039293          274 ESNVLTGEAESYGNDLLGILMRAYHSADETQKISLDDLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARKEVLE  353 (512)
Q Consensus       274 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~  353 (512)
                      ++....+.......|+++.++++..+    .+++++++.+++.++++||+|||+++++|++++|++||++|+|+++||++
T Consensus       263 ~~~~~~~~~~~~~~d~l~~ll~~~~~----~~l~~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~~~kl~~Ei~~  338 (503)
T 3s79_A          263 RRRISTEEKLEECMDFATELILAEKR----GDLTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQT  338 (503)
T ss_dssp             HHHHHTCTTTTTTCCHHHHHHHHHHT----TSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred             HHHhhcccccchHHHHHHHHHHhccc----CCCCHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence            76532222222345999999987532    46899999999999999999999999999999999999999999999999


Q ss_pred             HhCCCCCChhhhccchhHHHHHHhhhccCCCCccccceeccccccCCeeeCCCCEEEEccchhccCCCCcCCCCCCCCCC
Q 039293          354 LLGQQNPSADNISRLKIVGMIINETLRLYPPFVVFVREVKKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGEDFHLYKPE  433 (512)
Q Consensus       354 ~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~p~~F~P~  433 (512)
                      +++++.++++++++|||++|||+|++|++|++|.++|.+.+|++++||.|||||.|+++.+++||| ++| +||++|+||
T Consensus       339 v~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d-~~~-~dp~~F~Pe  416 (503)
T 3s79_A          339 VIGERDIKIDDIQKLKVMENFIYESMRYQPVVDLVMRKALEDDVIDGYPVKKGTNIILNIGRMHRL-EFF-PKPNEFTLE  416 (503)
T ss_dssp             HTTTSCCCHHHHTTCHHHHHHHHHHHHHSCSSCCEEEECSSCEEETTEEECTTCEEEECHHHHTTT-SSC-SSTTSCCGG
T ss_pred             HhCCCCCCHHHHhcCHHHHHHHHhhhccCCCcccccccccCCeeECCEEECCCCEEEeehHHhCCC-ccC-CChhhCChh
Confidence            999888999999999999999999999999999999999999999999999999999999999999 999 999999999


Q ss_pred             CCCCCCCccccCCCccccccCCCcccccchHHHHHHHHHHHHHHHhhcEEEeCCCCccCC---CcceeeecCCC---ceE
Q 039293          434 RFAQGVPKATSNNMAAFLPFGLGPRTCVGFNFTIIEAKIALSMILRRYKFTLSPNYVHSP---VPRITLCPQHG---IQV  507 (512)
Q Consensus       434 Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~~~---~~~~~~~~~~~---~~v  507 (512)
                      ||++..     ... .++|||+|+|.|+|++||.+|++++++.|+++|++++.++....+   ..+++..|..+   ++|
T Consensus       417 Rf~~~~-----~~~-~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~v  490 (503)
T 3s79_A          417 NFAKNV-----PYR-YFQPFGFGPRGCAGKYIAMVMMKAILVTLLRRFHVKTLQGQCVESIQKIHDLSLHPDETKNMLEM  490 (503)
T ss_dssp             GGSSCC-----CTT-TCCSSCCSTTSCTTHHHHHHHHHHHHHHHHTTEEEEESTTCCTTTSCEEESSSEEECTTSCCCCE
T ss_pred             hcCCCC-----Ccc-cccCCCCCCCCCCcHHHHHHHHHHHHHHHHHheEEEeCCCCCccccccccceeecCCCccceeeE
Confidence            999642     122 799999999999999999999999999999999999987644332   23667778776   999


Q ss_pred             EEEeC
Q 039293          508 MLRAL  512 (512)
Q Consensus       508 ~~~~r  512 (512)
                      ++++|
T Consensus       491 ~~~~R  495 (503)
T 3s79_A          491 IFTPR  495 (503)
T ss_dssp             EEEEC
T ss_pred             EeccC
Confidence            99998


No 7  
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=100.00  E-value=9.8e-75  Score=576.30  Aligned_cols=443  Identities=17%  Similarity=0.286  Sum_probs=348.4

Q ss_pred             CCCCCCCccCCCCHHHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCCeEEEecCCeeEEEecCHHHHHHHHhc
Q 039293           42 GIKGPSYKFFHGNNKEIINMKNEMIMSSSPMELSHQIFPITEPHIYSWIKLYGTNFLMWHGSQAELVVAEPKLIKEIMNN  121 (512)
Q Consensus        42 ~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~vf~~~~~~~~~vvv~dpe~i~~i~~~  121 (512)
                      .+|||+++|++||++.+..                   ++++..+.+++++||+||++++|+.+.|+++||+.+++++.+
T Consensus        12 ~pPgP~~~p~iG~~~~~~~-------------------~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~il~~   72 (477)
T 1r9o_A           12 LPPGPTPLPVIGNILQIGI-------------------KDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALID   72 (477)
T ss_dssp             CCCCSSSCC-----CCBCH-------------------HHHHHHHHHHHHHHCSEEEEESSSCEEEEECSHHHHHHHHTT
T ss_pred             CCCCCCCCceeccHhhcCC-------------------CChHHHHHHHHHHhCCEEEEEECCCcEEEECCHHHHHHHHhc
Confidence            6899999999999876511                   123567899999999999999999889999999999999976


Q ss_pred             CC-CCCCCchhh-hHh-hhcCceeccCCchHHHHhhhhcCcCCHH--HHhhhHHHHHHHHHHHHHHHHhhcCCcccHHHH
Q 039293          122 NR-SFPKREPRE-YLK-LLGNGLVTTRGEKWLKKRKLAVNAFHAE--NLKNMIPDMIASVDMMLERWRDYEGKEIDAYRE  196 (512)
Q Consensus       122 ~~-~~~~~~~~~-~~~-~~g~~l~~~~g~~w~~~Rr~~~~~~~~~--~l~~~~~~i~~~~~~li~~l~~~~~~~vd~~~~  196 (512)
                      +. .|.+++... ... ..|.++++.+|+.|+++||++.+.|+..  .++.+.+.+.++++++++.|.+..++++|+.++
T Consensus        73 ~~~~f~~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~  152 (477)
T 1r9o_A           73 LGEEFSGRGIFPLAERANRGFGIVFSNGKKWKEIRRFSLMTLRNFGMGKRSIEDRVQEEARCLVEELRKTKASPCDPTFI  152 (477)
T ss_dssp             TTTTTCEECCCSCCCTTTCTTSSTTCCHHHHHHHHHHHHHHHTTSSSCSSCHHHHHHHHHHHHHHHHHTTTTSCBCTHHH
T ss_pred             ccHhhCCCCcchhhhhccCCCceEecCChHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHhcCCCccChHHH
Confidence            54 665433211 222 2457888889999999999999988776  446789999999999999998654568999999


Q ss_pred             HHHHhHhHhhhcccCcccccccc-HHHHHHHHHHHHHHhh-----hhcccccccccccCcchhhhHHHHHHHHHHHHHHH
Q 039293          197 IKVLTSEIISRTAFGSCYLEGEN-IFNMLTKMAYIVAKKK-----YKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKVV  270 (512)
Q Consensus       197 ~~~~~~~~i~~~~fG~~~~~~~~-~~~~~~~~~~~~~~~~-----~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i  270 (512)
                      +..+++++|+.++||.+++..+. +......+...+....     ....+|++.++++.. .++..++.+.+.+++.+.+
T Consensus       153 ~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~lp~~-~~~~~~~~~~~~~~~~~~i  231 (477)
T 1r9o_A          153 LGCAPCNVICSIIFHKRFDYKDQQFLNLMEKLNENIKILSSPWIQICNNFSPIIDYFPGT-HNKLLKNVAFMKSYILEKV  231 (477)
T ss_dssp             HHHHHHHHHHHHHHSCCCCTTCHHHHHHHHHHHHHHHHHTCCBC-------CCCSCCTTC-HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHccCcCCCCCHHHHHHHHHHHHHHHhhccchhHHHhhccHHHHhcchH-HHHHHHHHHHHHHHHHHHH
Confidence            99999999999999998764332 2222222222221111     112456533555542 3456677788889999999


Q ss_pred             HHHhhhhhcccccccCCcHHHHHHHhcccc--ccccCCCHHHHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHH
Q 039293          271 KKRESNVLTGEAESYGNDLLGILMRAYHSA--DETQKISLDDLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKAR  348 (512)
Q Consensus       271 ~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~--~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~  348 (512)
                      +++++.  .+  .....|+++.++....+.  +.+..++++++.+++.++++||+|||+++++|++++|++||++|+|++
T Consensus       232 ~~r~~~--~~--~~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~  307 (477)
T 1r9o_A          232 KEHQES--MD--MNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQ  307 (477)
T ss_dssp             HHHHHT--CC--TTCCCSHHHHHHHHHHHHTTSCSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred             HHHHhc--cC--CCCchHHHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHHhCHHHHHHHH
Confidence            888764  11  123479999998653221  123569999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhC-CCCCChhhhccchhHHHHHHhhhccCCCCcc-ccceeccccccCCeeeCCCCEEEEccchhccCCCCcCCC
Q 039293          349 KEVLELLG-QQNPSADNISRLKIVGMIINETLRLYPPFVV-FVREVKKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGED  426 (512)
Q Consensus       349 ~Ei~~~~~-~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~  426 (512)
                      +||+++++ ++.++++++++||||+|||+|+||++|+++. ++|.+.+|++++||.||||+.|.++.+++||||++| +|
T Consensus       308 ~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~-~d  386 (477)
T 1r9o_A          308 EEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEF-PN  386 (477)
T ss_dssp             HHHHHHTCSSSCCCGGGGGGCHHHHHHHHHHHHHHTSSTTCSCEECSSCEEETTEEECTTCEEEECSHHHHTCTTTS-SS
T ss_pred             HHHHHhcCCCCCCChHhhccCcHHHHHHHHHHHhcCCCCCCCceeccCCccccceecCCCCEEEEecHHhhCCcccC-CC
Confidence            99999998 4668999999999999999999999999995 699999999999999999999999999999999999 99


Q ss_pred             CCCCCCCCCCCCCCccccCCCccccccCCCcccccchHHHHHHHHHHHHHHHhhcEEEeCCCCcc---CC-CcceeeecC
Q 039293          427 FHLYKPERFAQGVPKATSNNMAAFLPFGLGPRTCVGFNFTIIEAKIALSMILRRYKFTLSPNYVH---SP-VPRITLCPQ  502 (512)
Q Consensus       427 p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~---~~-~~~~~~~~~  502 (512)
                      |++|+||||+++++.. ..+. .++|||.|+|.|+|++||++|++++++.||++|++++.++...   .. ..+++..| 
T Consensus       387 P~~F~PeR~l~~~~~~-~~~~-~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p-  463 (477)
T 1r9o_A          387 PEMFDPHHFLDEGGNF-KKSK-YFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLKSLVDPKNLDTTPVVNGFASVP-  463 (477)
T ss_dssp             TTSCCGGGGBCTTSCB-CCCT-TCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEEESSCGGGCCCCCBCCSSSCBC-
T ss_pred             ccccCccceECCCCCc-Cccc-cccCCCCccCCCCCHHHHHHHHHHHHHHHHHhcEEecCCCCCCCCccCCcCceeecC-
Confidence            9999999999764322 2344 7999999999999999999999999999999999999766421   12 33556667 


Q ss_pred             CCceEEEEeC
Q 039293          503 HGIQVMLRAL  512 (512)
Q Consensus       503 ~~~~v~~~~r  512 (512)
                      .+++|++++|
T Consensus       464 ~~~~~~~~~R  473 (477)
T 1r9o_A          464 PFYQLCFIPI  473 (477)
T ss_dssp             CCCCEEEEEC
T ss_pred             CCeEEEEEEe
Confidence            6899999987


No 8  
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=100.00  E-value=1.5e-74  Score=574.61  Aligned_cols=443  Identities=19%  Similarity=0.321  Sum_probs=357.5

Q ss_pred             CCCCCCCccCCCCHHHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCCeEEEecCCeeEEEecCHHHHHHHHhc
Q 039293           42 GIKGPSYKFFHGNNKEIINMKNEMIMSSSPMELSHQIFPITEPHIYSWIKLYGTNFLMWHGSQAELVVAEPKLIKEIMNN  121 (512)
Q Consensus        42 ~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~vf~~~~~~~~~vvv~dpe~i~~i~~~  121 (512)
                      .+|||+++|++||++.+.                   .++++.++.+++++||+||++++|+.+.++++||+.+++++.+
T Consensus        11 ~pPgP~~~p~iG~~~~~~-------------------~~~~~~~~~~l~~~yG~v~~~~~~~~~~v~v~~~~~i~~il~~   71 (476)
T 2fdv_A           11 LPPGPTPLPFIGNYLQLN-------------------TEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVD   71 (476)
T ss_dssp             CCCCCCCBTTTBTGGGCC-------------------TTBHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTT
T ss_pred             CCCCCCCCcccccHhhcC-------------------CcchHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhc
Confidence            689999999999987651                   1234678999999999999999999999999999999999976


Q ss_pred             CC-CCCCCchhh-hHhh-hcCceeccCCchHHHHhhhhcCcCCHHHH--hhhHHHHHHHHHHHHHHHHhhcCCcccHHHH
Q 039293          122 NR-SFPKREPRE-YLKL-LGNGLVTTRGEKWLKKRKLAVNAFHAENL--KNMIPDMIASVDMMLERWRDYEGKEIDAYRE  196 (512)
Q Consensus       122 ~~-~~~~~~~~~-~~~~-~g~~l~~~~g~~w~~~Rr~~~~~~~~~~l--~~~~~~i~~~~~~li~~l~~~~~~~vd~~~~  196 (512)
                      +. .|.+++... ...+ .|.++++.+|+.|+++|+++.+.|+...+  +.+.+.+.++++++++.|.+..++++|+.++
T Consensus        72 ~~~~f~~~~~~~~~~~~~~~~~l~~~~g~~~~~~Rr~~~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~  151 (476)
T 2fdv_A           72 QAEEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDFGVGKRGIEERIQEEAGFLIDALRGTGGANIDPTFF  151 (476)
T ss_dssp             TTTTTCEECCCHHHHHHHTTCSSSSCCHHHHHHHHHHHHHHHHHTTTTSHHHHHHHHHHHHHHHHHHHHTTTCCBCCHHH
T ss_pred             ChHhhCCCCCcHHHhhhcCCCCeEecCchHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHhcCCCccChHHH
Confidence            54 675433221 2222 36788888999999999999999987766  7899999999999999998654468999999


Q ss_pred             HHHHhHhHhhhcccCcccccccc-HHHHHHHHHHHHHHhh-----hhcccccccccccCcchhhhHHHHHHHHHHHHHHH
Q 039293          197 IKVLTSEIISRTAFGSCYLEGEN-IFNMLTKMAYIVAKKK-----YKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKVV  270 (512)
Q Consensus       197 ~~~~~~~~i~~~~fG~~~~~~~~-~~~~~~~~~~~~~~~~-----~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i  270 (512)
                      +..+++++++.++||.+++..+. .......+...+....     ....+|++.++++. ..++..++.+.+.+++.+.+
T Consensus       152 ~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~-~~~~~~~~~~~~~~~~~~~i  230 (476)
T 2fdv_A          152 LSRTVSNVISSIVFGDRFDYKDKEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPG-PQQQAFQLLQGLEDFIAKKV  230 (476)
T ss_dssp             HHHHHHHHHHHHHHSSCCCTTCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHTTSCS-HHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCcCCCCCHHHHHHHHHHHHHHHhhcccccchhhhhhhHHHhcCc-HHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999998764332 2222222222211110     12245652255552 34556677888899999999


Q ss_pred             HHHhhhhhcccccccCCcHHHHHHHhcccc--ccccCCCHHHHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHH
Q 039293          271 KKRESNVLTGEAESYGNDLLGILMRAYHSA--DETQKISLDDLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKAR  348 (512)
Q Consensus       271 ~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~--~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~  348 (512)
                      +++++.  .+  .....|+++.++.+..+.  +.+..++++++.+++.++++||+|||+++++|++++|++||++|+|++
T Consensus       231 ~~r~~~--~~--~~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~  306 (476)
T 2fdv_A          231 EHNQRT--LD--PNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVH  306 (476)
T ss_dssp             HHHHTT--CC--TTSCCSHHHHHHHHHHHTTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred             HHHHHh--cC--CCCCccHHHHHHHHHHhcccCccccccHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHH
Confidence            888764  11  123579999999764321  123568999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhCC-CCCChhhhccchhHHHHHHhhhccCCCCc-cccceeccccccCCeeeCCCCEEEEccchhccCCCCcCCC
Q 039293          349 KEVLELLGQ-QNPSADNISRLKIVGMIINETLRLYPPFV-VFVREVKKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGED  426 (512)
Q Consensus       349 ~Ei~~~~~~-~~~~~~~~~~l~~l~a~i~E~lRl~p~~~-~~~R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~  426 (512)
                      +||++++++ +.++++++.+||||+|||+|+||++|+++ .++|.+.+|++++||.||||+.|.++.+++||||++| +|
T Consensus       307 ~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~-~d  385 (476)
T 2fdv_A          307 EEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFF-SN  385 (476)
T ss_dssp             HHHHHHTCSSSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEECHHHHHTCTTTC-SS
T ss_pred             HHHHHhhcCCCCCChhhhhcChHHHHHHHHHHHhcCCcccCcceeccCCeeECCEeeCCCCEEEeehHHhhCChhhc-CC
Confidence            999999984 56899999999999999999999999999 4699999999999999999999999999999999999 99


Q ss_pred             CCCCCCCCCCCCCCccccCCCccccccCCCcccccchHHHHHHHHHHHHHHHhhcEEEeCCCCcc---CC-CcceeeecC
Q 039293          427 FHLYKPERFAQGVPKATSNNMAAFLPFGLGPRTCVGFNFTIIEAKIALSMILRRYKFTLSPNYVH---SP-VPRITLCPQ  502 (512)
Q Consensus       427 p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~---~~-~~~~~~~~~  502 (512)
                      |++|+||||+++++.. ..+. .++|||+|+|.|+|++||++|++++++.|+++|++++.++...   .. ..+++..| 
T Consensus       386 p~~F~PeR~l~~~~~~-~~~~-~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p-  462 (476)
T 2fdv_A          386 PQDFNPQHFLNEKGQF-KKSD-AFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFATIP-  462 (476)
T ss_dssp             TTSCCGGGGBCTTSCB-CCCT-TCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCGGGCCCSCSEESSSEEC-
T ss_pred             ccccCchhhCCCCCCC-CCCc-CcccCCCCCCCCCChHHHHHHHHHHHHHHHhhcEEEcCCCCCCCCccccccceeecC-
Confidence            9999999999753322 2344 7999999999999999999999999999999999999876421   12 33556677 


Q ss_pred             CCceEEEEeC
Q 039293          503 HGIQVMLRAL  512 (512)
Q Consensus       503 ~~~~v~~~~r  512 (512)
                      .+++|++++|
T Consensus       463 ~~~~v~~~~R  472 (476)
T 2fdv_A          463 RNYTMSFLPR  472 (476)
T ss_dssp             CCCCEEEEEC
T ss_pred             CceEEEEEec
Confidence            6899999987


No 9  
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Probab=100.00  E-value=2.4e-74  Score=575.72  Aligned_cols=444  Identities=19%  Similarity=0.226  Sum_probs=352.8

Q ss_pred             CCCCCCCccCCCCHHHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCCeEEEecCCeeEEEecCHHHHHHHHhc
Q 039293           42 GIKGPSYKFFHGNNKEIINMKNEMIMSSSPMELSHQIFPITEPHIYSWIKLYGTNFLMWHGSQAELVVAEPKLIKEIMNN  121 (512)
Q Consensus        42 ~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~vf~~~~~~~~~vvv~dpe~i~~i~~~  121 (512)
                      .+|||+++++. +++.+.....               .++++.++.+|+++||+||++++|+.+.|+++||+++++++.+
T Consensus        10 ~~PGP~~~~~~-~~~~~~~~~~---------------~~~~~~~~~~l~~kYG~i~~~~~g~~~~vvv~dp~~~~~il~~   73 (487)
T 3n9y_A           10 EIPSPGDNGWL-NLYHFWRETG---------------THKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDVALLFKS   73 (487)
T ss_dssp             GSCCSCSCHHH-HHHHHHHHTC---------------GGGHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHHT
T ss_pred             hCCCCCCCChh-hHHHHHhcCC---------------CcchhHHHHHHHHHcCceeeccCCCCCEEEEcCHHHHHHHHHh
Confidence            79999988865 7776653211               1245778999999999999999999999999999999999987


Q ss_pred             CCCCCCCchh-h---hHhh--hcCceeccCCchHHHHhhhhcCc-CCHHHHhhhHHHHHHHHHHHHHHHHhhc------C
Q 039293          122 NRSFPKREPR-E---YLKL--LGNGLVTTRGEKWLKKRKLAVNA-FHAENLKNMIPDMIASVDMMLERWRDYE------G  188 (512)
Q Consensus       122 ~~~~~~~~~~-~---~~~~--~g~~l~~~~g~~w~~~Rr~~~~~-~~~~~l~~~~~~i~~~~~~li~~l~~~~------~  188 (512)
                      ++.|.+++.. .   ....  .+.+++..+|+.|+++|+++.+. |+.+.++.+.+.++++++++++.|.+..      +
T Consensus        74 ~~~f~~r~~~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~  153 (487)
T 3n9y_A           74 EGPNPERFLIPPWVAYHQYYQRPIGVLLKKSAAWKKDRVALNQEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGN  153 (487)
T ss_dssp             CCSSCCCCCCHHHHHHHHHTTCCCCGGGCCHHHHHHHHHHHHHHHTSHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSSS
T ss_pred             CCCCCCCCCCcHHHHHHHHccccCCCccCCcHHHHHHHHhcCcccCCchHHHHhhhHHHHHHHHHHHHHHHHhcccccCC
Confidence            7667554422 1   1112  35688889999999999999985 9999999999999999999999997632      1


Q ss_pred             CcccHHHHHHHHhHhHhhhcccCccccccc----c-HHHHHHHHHHHHHHhhhhccccc-ccccccCcchhhhHHHHHHH
Q 039293          189 KEIDAYREIKVLTSEIISRTAFGSCYLEGE----N-IFNMLTKMAYIVAKKKYKLEIPG-IGKLLKTNDDIESDKLEQDI  262 (512)
Q Consensus       189 ~~vd~~~~~~~~~~~~i~~~~fG~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~P~-l~~~~~~~~~~~~~~~~~~~  262 (512)
                      .++|+..++..+++|+++.++||.+++..+    . .......+...+........+|. +.++++....+...+..+.+
T Consensus       154 ~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~  233 (487)
T 3n9y_A          154 YSGDISDDLFRFAFESITNVIFGERQGMLEEVVNPEAQRFIDAIYQMFHTSVPMLNLPPDLFRLFRTKTWKDHVAAWDVI  233 (487)
T ss_dssp             EEECCHHHHHHHHHHHHHHHHHSSCCCTTSSSCCHHHHHHHHHHHHHHHHHGGGTTSCHHHHHHHCHHHHHHHHHHHHHH
T ss_pred             CCccHHHHHHHHHHHHHHHHHhcccccccCCCCChHHHHHHHHHHHHHHHHHHHHhcCHHHHhhcccHHHHHHHHHHHHH
Confidence            279999999999999999999999875211    1 11122222222222222233342 22444433334444555556


Q ss_pred             HHHHHHHHHHHhhhhhcc-cccccCCcHHHHHHHhccccccccCCCHHHHHHHHHHHHHhchhhhHHHHHHHHHHHhhCh
Q 039293          263 RDSIIKVVKKRESNVLTG-EAESYGNDLLGILMRAYHSADETQKISLDDLIDECKTFYVAGTDTTASLLSWTIFLLAIHS  341 (512)
Q Consensus       263 ~~~l~~~i~~~~~~~~~~-~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p  341 (512)
                      .+.+.+.++++.+....+ .......|+++.+++.       ..++++++.+++.++++||+|||+++++|++++|++||
T Consensus       234 ~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~-------~~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P  306 (487)
T 3n9y_A          234 FSKADIYTQNFYWELRQKGSVHHDYRGILYRLLGD-------SKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNL  306 (487)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCCCSSCCCHHHHHHHS-------CSSCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHCH
T ss_pred             HHHHHHHHHHHHHHHHhcCCcccchHHHHHHHHhc-------CCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCh
Confidence            666666666554432111 1123457899999864       25899999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhC-CCCCChhhhccchhHHHHHHhhhccCCCCccccceeccccccCCeeeCCCCEEEEccchhccCC
Q 039293          342 DWQDKARKEVLELLG-QQNPSADNISRLKIVGMIINETLRLYPPFVVFVREVKKEVKLGDLIVPANVDVTIPVIAVHHDP  420 (512)
Q Consensus       342 ~~~~~l~~Ei~~~~~-~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~  420 (512)
                      ++|+|+++|++++++ ++.++++++.+||||+|||+|+||++|+++.++|.+++|++++||.|||||.|+++.+++||||
T Consensus       307 ~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~  386 (487)
T 3n9y_A          307 KVQDMLRAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREP  386 (487)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCHHHHTTSCHHHHHHHHHHHHHSCSSSEEEEECSSCEEETTEEECTTCEEEEEHHHHHTCT
T ss_pred             HHHHHHHHHHHHhhcccccchhhhhhhCHHHHHHHHHHhhhCCcccccceeecCceeeCCEEECCCCEEEeCcHHhcCCc
Confidence            999999999999988 4556789999999999999999999999998899999999999999999999999999999999


Q ss_pred             CCcCCCCCCCCCCCCCCCCCccccCCCccccccCCCcccccchHHHHHHHHHHHHHHHhhcEEEeCCCCccCCCcceeee
Q 039293          421 QIWGEDFHLYKPERFAQGVPKATSNNMAAFLPFGLGPRTCVGFNFTIIEAKIALSMILRRYKFTLSPNYVHSPVPRITLC  500 (512)
Q Consensus       421 ~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~  500 (512)
                      ++| +||++|+||||++.++  ...+. .++|||.|+|.|+|++||++|++++++.||++|++++.++.+......+++.
T Consensus       387 ~~~-~dp~~F~PeR~l~~~~--~~~~~-~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~  462 (487)
T 3n9y_A          387 TFF-FDPENFDPTRWLSKDK--NITYF-RNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEIQHLSDVGTTFNLILM  462 (487)
T ss_dssp             TTS-SSTTSCCGGGGTCSCT--TSSTT-TCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEECTTCCCCCEEESSSEE
T ss_pred             ccC-CCcccCChhhcCCCCC--CCCCC-CCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCEEEecCCcccccceeeeec
Confidence            999 9999999999998533  22344 7899999999999999999999999999999999999876444444567889


Q ss_pred             cCCCceEEEEeC
Q 039293          501 PQHGIQVMLRAL  512 (512)
Q Consensus       501 ~~~~~~v~~~~r  512 (512)
                      |+.+++|++++|
T Consensus       463 p~~~~~~~~~~r  474 (487)
T 3n9y_A          463 PEKPISFTFWPF  474 (487)
T ss_dssp             ESSCCCEEEEEC
T ss_pred             CCCCceeEEEEC
Confidence            999999999998


No 10 
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=100.00  E-value=6.1e-75  Score=577.36  Aligned_cols=443  Identities=20%  Similarity=0.304  Sum_probs=355.5

Q ss_pred             CCCCCCCccCCCCHHHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCCeEEEecCCeeEEEecCHHHHHHHHhc
Q 039293           42 GIKGPSYKFFHGNNKEIINMKNEMIMSSSPMELSHQIFPITEPHIYSWIKLYGTNFLMWHGSQAELVVAEPKLIKEIMNN  121 (512)
Q Consensus        42 ~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~vf~~~~~~~~~vvv~dpe~i~~i~~~  121 (512)
                      .+|||+++|++||++.+.                   .++++..+.+++++||+||++++|+.+.|+++||+.+++++.+
T Consensus        11 ~pPgP~~~p~iG~~~~~~-------------------~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~i~~il~~   71 (476)
T 1po5_A           11 LPPGPSPLPVLGNLLQMD-------------------RKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVD   71 (476)
T ss_dssp             CCCCSCCBTTTBTGGGCC-------------------TTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTT
T ss_pred             CCcCCCCCCccccHHhcc-------------------CCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHh
Confidence            689999999999988651                   1244678999999999999999999999999999999999976


Q ss_pred             CC-CCCCCchhh-hHhh-hcCceeccCCchHHHHhhhhcCcCCHH--HHhhhHHHHHHHHHHHHHHHHhhcCCcccHHHH
Q 039293          122 NR-SFPKREPRE-YLKL-LGNGLVTTRGEKWLKKRKLAVNAFHAE--NLKNMIPDMIASVDMMLERWRDYEGKEIDAYRE  196 (512)
Q Consensus       122 ~~-~~~~~~~~~-~~~~-~g~~l~~~~g~~w~~~Rr~~~~~~~~~--~l~~~~~~i~~~~~~li~~l~~~~~~~vd~~~~  196 (512)
                      +. .|.+++... ...+ .|.++++.+|+.|+++||++.+.|+..  .++.+.+.+.++++++++.|.+..++++|+.++
T Consensus        72 ~~~~f~~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~d~~~~  151 (476)
T 1po5_A           72 QAEAFSGRGKIAVVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNTLL  151 (476)
T ss_dssp             TTTTTCEECCGGGGCSCCSSCCCCCSSHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTTTCCBCCHHH
T ss_pred             CcHhhCCCCCcHHHHhhcCCCceEecCCcHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHhcCCCccCHHHH
Confidence            54 676533222 2222 457888889999999999999988776  457889999999999999998755568999999


Q ss_pred             HHHHhHhHhhhcccCcccccccc-HHHHHHHHHHHHHHh-----hhhcccccccccccCcchhhhHHHHHHHHHHHHHHH
Q 039293          197 IKVLTSEIISRTAFGSCYLEGEN-IFNMLTKMAYIVAKK-----KYKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKVV  270 (512)
Q Consensus       197 ~~~~~~~~i~~~~fG~~~~~~~~-~~~~~~~~~~~~~~~-----~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i  270 (512)
                      +..+++++|+.++||.+++.++. +......+...+...     .....+|++.++++.. .++..++.+.+.+++.+.+
T Consensus       152 ~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~lp~~-~~~~~~~~~~~~~~~~~~i  230 (476)
T 1po5_A          152 FHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKHFPGT-HRQIYRNLQEINTFIGQSV  230 (476)
T ss_dssp             HHHHHHHHHHHHHHSSCCCTTCHHHHHHHHHHHHHTTTCCTTHHHHHHHTHHHHHTSSCS-HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHhhhcchhhHHHHhhhHHHHhcCcH-HHHHHHHHHHHHHHHHHHH
Confidence            99999999999999998764332 222222222211000     0112345432455532 3556677788899999999


Q ss_pred             HHHhhhhhcccccccCCcHHHHHHHhcccc--ccccCCCHHHHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHH
Q 039293          271 KKRESNVLTGEAESYGNDLLGILMRAYHSA--DETQKISLDDLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKAR  348 (512)
Q Consensus       271 ~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~--~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~  348 (512)
                      +++++.  .+  .....|+++.++.+..+.  +.+..++++++.+++.++++||+|||+++++|++++|++||++|+|++
T Consensus       231 ~~r~~~--~~--~~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~  306 (476)
T 1po5_A          231 EKHRAT--LD--PSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQ  306 (476)
T ss_dssp             HHHHTT--CC--TTSCCSHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred             HHHHHh--cC--CCCcccHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhCHHHHHHHH
Confidence            888764  11  123479999998654321  113458899999999999999999999999999999999999999999


Q ss_pred             HHHHHHhC-CCCCChhhhccchhHHHHHHhhhccCCCCcc-ccceeccccccCCeeeCCCCEEEEccchhccCCCCcCCC
Q 039293          349 KEVLELLG-QQNPSADNISRLKIVGMIINETLRLYPPFVV-FVREVKKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGED  426 (512)
Q Consensus       349 ~Ei~~~~~-~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~  426 (512)
                      +||+++++ ++.++++++.+||||+|||+|+||++|+++. ++|.+.+|++++||.||||+.|+++.+++||||++| +|
T Consensus       307 ~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rdp~~~-~d  385 (476)
T 1po5_A          307 KEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYF-ET  385 (476)
T ss_dssp             HHHHHHTCSSSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEETTEEECTTCEEEECHHHHHTCTTTC-SS
T ss_pred             HHHHHHhCCCCCCChHHHhcCcHHHHHHHHHHHhccCCCCCCccccCCCceecCEecCCCCEEEeehHhHhcCcccc-CC
Confidence            99999998 4668999999999999999999999999995 699999999999999999999999999999999999 99


Q ss_pred             CCCCCCCCCCCCCCccccCCCccccccCCCcccccchHHHHHHHHHHHHHHHhhcEEEeCCCCcc---CC-CcceeeecC
Q 039293          427 FHLYKPERFAQGVPKATSNNMAAFLPFGLGPRTCVGFNFTIIEAKIALSMILRRYKFTLSPNYVH---SP-VPRITLCPQ  502 (512)
Q Consensus       427 p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~---~~-~~~~~~~~~  502 (512)
                      |++|+||||+++++.. ..+. .++|||+|+|.|+|++||++|++++++.||++|++++.++...   .. ..+++..| 
T Consensus       386 p~~F~PeR~l~~~~~~-~~~~-~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p-  462 (476)
T 1po5_A          386 PNTFNPGHFLDANGAL-KRNE-GFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVPPEDIDLTPRESGVGNVP-  462 (476)
T ss_dssp             TTSCCGGGGBCTTSCB-CCCT-TCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECSSCGGGCCCCCCSTTSSCCC-
T ss_pred             ccccCchhhCCCCCCc-cCCc-cccCCCCccccCcchHHHHHHHHHHHHHHHhceEEeCCCCCCCCCccCCcCceeecC-
Confidence            9999999999754322 2344 7999999999999999999999999999999999999765421   22 34556677 


Q ss_pred             CCceEEEEeC
Q 039293          503 HGIQVMLRAL  512 (512)
Q Consensus       503 ~~~~v~~~~r  512 (512)
                      .+++|++++|
T Consensus       463 ~~~~v~~~~R  472 (476)
T 1po5_A          463 PSYQIRFLAR  472 (476)
T ss_dssp             CCCCBEEEEC
T ss_pred             cceEEEEEec
Confidence            6899999987


No 11 
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=100.00  E-value=1.3e-74  Score=576.67  Aligned_cols=444  Identities=15%  Similarity=0.249  Sum_probs=341.9

Q ss_pred             CCCCCCCCccCCCCHHHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCCeEEEecCCeeEEEecCHHHHHHHHh
Q 039293           41 QGIKGPSYKFFHGNNKEIINMKNEMIMSSSPMELSHQIFPITEPHIYSWIKLYGTNFLMWHGSQAELVVAEPKLIKEIMN  120 (512)
Q Consensus        41 ~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~vf~~~~~~~~~vvv~dpe~i~~i~~  120 (512)
                      +.||||+++|++||++.+..                   ++.+..+.+|++|||+||++++|++++|+|+||+++++++.
T Consensus        10 kLPPGP~~lP~iGn~~~~~~-------------------~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~i~~vl~   70 (479)
T 3tbg_A           10 KLPPGPLPLPGLGNLLHVDF-------------------QNTPYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALV   70 (479)
T ss_dssp             CCCCCSCCBTTTBTGGGCCT-------------------TSHHHHHHHHHHHHCSEEEEEETTEEEEEEEHHHHHHHHHT
T ss_pred             CCCCCCCCcCcccchHhhcC-------------------CCHHHHHHHHHHHhCCEEEEEECCeeEEEECCHHHHHHHHH
Confidence            47899999999999887632                   23466789999999999999999999999999999999998


Q ss_pred             cCC-CCCCCchhhhHhh-----hcCceec-cCCchHHHHhhhhcCcCCHHHHh--hhHHHHHHHHHHHHHHHHhhcCCcc
Q 039293          121 NNR-SFPKREPREYLKL-----LGNGLVT-TRGEKWLKKRKLAVNAFHAENLK--NMIPDMIASVDMMLERWRDYEGKEI  191 (512)
Q Consensus       121 ~~~-~~~~~~~~~~~~~-----~g~~l~~-~~g~~w~~~Rr~~~~~~~~~~l~--~~~~~i~~~~~~li~~l~~~~~~~v  191 (512)
                      +++ .|..++.......     .+.++++ .+|+.|+++|+++.+.|+...+.  .+.+.+......+...+....++.+
T Consensus        71 ~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  150 (479)
T 3tbg_A           71 THGEDTADRPPVPITQILGFGPRSQGVFLARYGPAWREQRRFSVSTLRNLGLGKKSLEQWVTEEAACLCAAFANHSGRPF  150 (479)
T ss_dssp             TTGGGSCBCCCCGGGGGGTCBTTBCCSTTCCSSHHHHHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHHHHHHTTTTCCB
T ss_pred             hCChhhcCCCchHHHHHhccCCCCCceeeCCCCHHHHHHHHHHHHHhcchhhhHHHHHHHHHHHHHHHHHHHHhccCCcc
Confidence            776 6654433222222     2345544 45999999999999988766553  3567777777777777776655699


Q ss_pred             cHHHHHHHHhHhHhhhcccCccccccccHHHHHHHHHHHHHHhhh------hcccccccccccCcchhhhHHHHHHHHHH
Q 039293          192 DAYREIKVLTSEIISRTAFGSCYLEGENIFNMLTKMAYIVAKKKY------KLEIPGIGKLLKTNDDIESDKLEQDIRDS  265 (512)
Q Consensus       192 d~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~P~l~~~~~~~~~~~~~~~~~~~~~~  265 (512)
                      |+...+..++.++++.++||..++..+..................      ....|.. .+++. ...+.....+...+.
T Consensus       151 ~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~  228 (479)
T 3tbg_A          151 RPNGLLDKAVSNVIASLTCGRRFEYDDPRFLRLLDLAQEGLKEESGFLREVLNAVPVL-LHIPA-LAGKVLRFQKAFLTQ  228 (479)
T ss_dssp             CTHHHHHHHHHHHHHHHHHSCCCCTTCHHHHHHHHHHHHHHHTTSSHHHHHHHHSGGG-GGSHH-HHHHHTHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHhhcCCcccccchhhhhhhhhhhhhhhhhhhhhhhhhcccchh-ccchh-hHHHHHHHHHHHHHH
Confidence            999999999999999999999887555433222221111111110      1112222 22211 123344445556666


Q ss_pred             HHHHHHHHhhhhhcccccccCCcHHHHHHHhccc--cccccCCCHHHHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHH
Q 039293          266 IIKVVKKRESNVLTGEAESYGNDLLGILMRAYHS--ADETQKISLDDLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDW  343 (512)
Q Consensus       266 l~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~--~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~  343 (512)
                      +.+.+.+.....   .......|+++.+......  .+....++++++.+++.++++||+|||+++++|++++|++||++
T Consensus       229 ~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~  305 (479)
T 3tbg_A          229 LDELLTEHRMTW---DPAQPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDV  305 (479)
T ss_dssp             HHHHHHHHHHHC---CTTSCCCSHHHHHHHHHHHTTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred             HHHHHHHHHHhh---hcccccchhhhhhhhhhhhcccCCccchhhHHHHHHHHHHHHhhhhhhHHHHHHHHHHhccCHHH
Confidence            666666655441   1223456777766644322  12356799999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhC-CCCCChhhhccchhHHHHHHhhhccCCCCccc-cceeccccccCCeeeCCCCEEEEccchhccCCC
Q 039293          344 QDKARKEVLELLG-QQNPSADNISRLKIVGMIINETLRLYPPFVVF-VREVKKEVKLGDLIVPANVDVTIPVIAVHHDPQ  421 (512)
Q Consensus       344 ~~~l~~Ei~~~~~-~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~-~R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~  421 (512)
                      |+|+++|++++++ ++.++.+++.+||||+|||+||||++|++|.. +|.+.+|++++||.|||||.|+++.+++||||+
T Consensus       306 q~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~~~~~~d~~~~g~~IP~Gt~V~~~~~~~h~d~~  385 (479)
T 3tbg_A          306 QRRVQQEIDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEA  385 (479)
T ss_dssp             HHHHHHHHHHHTCSSSCCCHHHHTTCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEETTEEECTTCEEEEEHHHHHTCTT
T ss_pred             HHHHHHHHHHHHhhccccchhhhccccccccceeeeccccccccccceeecCCCceECCEEecCCCeeeechhhhcCChh
Confidence            9999999999987 57799999999999999999999999999997 567788999999999999999999999999999


Q ss_pred             CcCCCCCCCCCCCCCCCCCccccCCCccccccCCCcccccchHHHHHHHHHHHHHHHhhcEEEeCCCCccCC---Cccee
Q 039293          422 IWGEDFHLYKPERFAQGVPKATSNNMAAFLPFGLGPRTCVGFNFTIIEAKIALSMILRRYKFTLSPNYVHSP---VPRIT  498 (512)
Q Consensus       422 ~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~~~---~~~~~  498 (512)
                      +| +||++|+||||+++++. ..++. +|+|||+|+|.|+|++||++|+++++|.||++|+|+++++.....   ..+++
T Consensus       386 ~~-~dP~~F~PeRfl~~~~~-~~~~~-~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~  462 (479)
T 3tbg_A          386 VW-EKPFRFHPEHFLDAQGH-FVKPE-AFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTGQPRPSHHGVFAFL  462 (479)
T ss_dssp             TS-SSTTSCCGGGGBCTTCC-BCCCT-TCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEECCTTSCCCCSCEEESSS
T ss_pred             hC-CCccccCccccCCCCcc-cCCCC-ceecCCCCCcCChhHHHHHHHHHHHHHHHHHccEEEeCCCCCCccccccceee
Confidence            99 99999999999987443 33455 899999999999999999999999999999999999987643322   23456


Q ss_pred             eecCCCceEEEEeC
Q 039293          499 LCPQHGIQVMLRAL  512 (512)
Q Consensus       499 ~~~~~~~~v~~~~r  512 (512)
                      ..|. +++|+++||
T Consensus       463 ~~P~-~~~v~~~pR  475 (479)
T 3tbg_A          463 VSPS-PYELCAVPR  475 (479)
T ss_dssp             EEEC-CCCBEEEEC
T ss_pred             ecCC-CeEEEEEEC
Confidence            6675 799999998


No 12 
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=100.00  E-value=5e-74  Score=571.87  Aligned_cols=444  Identities=17%  Similarity=0.260  Sum_probs=356.3

Q ss_pred             CCCCCCCCccCCCCHHHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCCeEEEecCCeeEEEecCHHHHHHHHh
Q 039293           41 QGIKGPSYKFFHGNNKEIINMKNEMIMSSSPMELSHQIFPITEPHIYSWIKLYGTNFLMWHGSQAELVVAEPKLIKEIMN  120 (512)
Q Consensus        41 ~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~vf~~~~~~~~~vvv~dpe~i~~i~~  120 (512)
                      +.||||+++|++||++.+..                   .+++..+.+|+++||+||++++|+.++|+|+||+++++++.
T Consensus        10 ~lpPgP~~~PliG~~~~~~~-------------------~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~~~~v~~il~   70 (476)
T 3e6i_A           10 KLPPGPFPLPIIGNLFQLEL-------------------KNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALL   70 (476)
T ss_dssp             CCCCCCCCBTTTBTGGGCCT-------------------TCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHH
T ss_pred             CCCcCCCCcccccChhhhcc-------------------ccHhHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHh
Confidence            47899999999999987621                   23467899999999999999999999999999999999998


Q ss_pred             cCC-CCCCCchhh-hHhhhcCceeccCCchHHHHhhhhcCcCCHHHH--hhhHHHHHHHHHHHHHHHHhhcCCcccHHHH
Q 039293          121 NNR-SFPKREPRE-YLKLLGNGLVTTRGEKWLKKRKLAVNAFHAENL--KNMIPDMIASVDMMLERWRDYEGKEIDAYRE  196 (512)
Q Consensus       121 ~~~-~~~~~~~~~-~~~~~g~~l~~~~g~~w~~~Rr~~~~~~~~~~l--~~~~~~i~~~~~~li~~l~~~~~~~vd~~~~  196 (512)
                      ++. .|.+++... ...+.+.++++.+|+.|+++|++..+.|+...+  ..+++.++++++++++.+.+..++++|+..+
T Consensus        71 ~~~~~f~~r~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~l~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~d~~~~  150 (476)
T 3e6i_A           71 DYKDEFSGRGDLPAFHAHRDRGIIFNNGPTWKDIRRFSLTTLRNYGMGKQGNESRIQREAHFLLEALRKTQGQPFDPTFL  150 (476)
T ss_dssp             TSTTTTCEECCCGGGGGGTTSSSTTCCSTTHHHHHHHHHHHHHHTC-CCSHHHHHHHHHHHHHHHHHHTTTTSCBCTHHH
T ss_pred             cchHhhCCCCCCchhheecCCCEEecCCcHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhCCCCcChHHH
Confidence            875 676544333 444555589999999999999988777755433  4578999999999999998765568999999


Q ss_pred             HHHHhHhHhhhcccCcccccccc-HHHHHHHHHHHHHHhh-----hhcccccccccccCcchhhhHHHHHHHHHHHHHHH
Q 039293          197 IKVLTSEIISRTAFGSCYLEGEN-IFNMLTKMAYIVAKKK-----YKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKVV  270 (512)
Q Consensus       197 ~~~~~~~~i~~~~fG~~~~~~~~-~~~~~~~~~~~~~~~~-----~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i  270 (512)
                      +..+++++|+.++||.+++..+. .......+...+....     ....+|.+.++++. ..++..+..+.+.+++.+.+
T Consensus       151 ~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~lp~-~~~~~~~~~~~~~~~~~~~i  229 (476)
T 3e6i_A          151 IGCAPCNVIADILFRKHFDYNDEKFLRLMYLFNENFHLLSTPWLQLYNNFPSFLHYLPG-SHRKVIKNVAEVKEYVSERV  229 (476)
T ss_dssp             HTHHHHHHHHHHHHSCCCCTTCHHHHHHHHHHHHHHHHTTSHHHHHHHHSHHHHTTSCS-HHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCc-HHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999998875443 2222222222221110     12234523255553 34556777888889999999


Q ss_pred             HHHhhhhhcccccccCCcHHHHHHHhcccc--ccccCCCHHHHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHH
Q 039293          271 KKRESNVLTGEAESYGNDLLGILMRAYHSA--DETQKISLDDLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKAR  348 (512)
Q Consensus       271 ~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~--~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~  348 (512)
                      +++++.  .+.  ....|+++.++....++  +.+..++++++.+++.++++||+|||+++++|++++|++||++|+|++
T Consensus       230 ~~~~~~--~~~--~~~~d~~~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~  305 (476)
T 3e6i_A          230 KEHHQS--LDP--NCPRDLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLH  305 (476)
T ss_dssp             HHHHHT--CCT--TSCCSHHHHHHHHHHSSSSCSSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred             HHHhhc--CCC--CCCccHHHHHHHHHHhcccCCCCCcCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence            888765  221  23569999999765433  124468999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhC-CCCCChhhhccchhHHHHHHhhhccCCCCcc-ccceeccccccCCeeeCCCCEEEEccchhccCCCCcCCC
Q 039293          349 KEVLELLG-QQNPSADNISRLKIVGMIINETLRLYPPFVV-FVREVKKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGED  426 (512)
Q Consensus       349 ~Ei~~~~~-~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~  426 (512)
                      +||+++++ ++.++++++++||||+|||+|+||++|+++. ++|.+.+|++++||.||||+.|+++.+++||||++| +|
T Consensus       306 ~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~-~~  384 (476)
T 3e6i_A          306 EEIDRVIGPSRIPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEF-PD  384 (476)
T ss_dssp             HHHHHHTTTTSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEECSHHHHTCTTTS-SS
T ss_pred             HHHHHhcCCCCCCChhhccCCchHHHHHHHHHHhccCCCccccccCCCCeeEcCEEeCCCCEEEechHHhhCCcccC-CC
Confidence            99999998 5678999999999999999999999999996 699999999999999999999999999999999999 99


Q ss_pred             CCCCCCCCCCCCCCccccCCCccccccCCCcccccchHHHHHHHHHHHHHHHhhcEEEeCCC-CccC--CC-cceeeecC
Q 039293          427 FHLYKPERFAQGVPKATSNNMAAFLPFGLGPRTCVGFNFTIIEAKIALSMILRRYKFTLSPN-YVHS--PV-PRITLCPQ  502 (512)
Q Consensus       427 p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~la~ll~~f~~~~~~~-~~~~--~~-~~~~~~~~  502 (512)
                      |++|+||||+++++.. ..+. .++|||.|+|.|+|++||++|++++++.||++|++++..+ ....  +. .+++..| 
T Consensus       385 p~~F~PeR~l~~~~~~-~~~~-~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p-  461 (476)
T 3e6i_A          385 PEKFKPEHFLNENGKF-KYSD-YFKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLKPLVDPKDIDLSPIHIGFGCIP-  461 (476)
T ss_dssp             TTSCCGGGGBCTTSSB-CCCT-TCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCTTTCCCSCSEESSSEEC-
T ss_pred             ccccCchhhcCCCCCc-cCcc-ceecCCCCCccCccHHHHHHHHHHHHHHHHHhcEeecCCCCCCCCCCcccCccccCC-
Confidence            9999999999864322 2344 7999999999999999999999999999999999998532 2222  11 2344445 


Q ss_pred             CCceEEEEeC
Q 039293          503 HGIQVMLRAL  512 (512)
Q Consensus       503 ~~~~v~~~~r  512 (512)
                      .+++|++++|
T Consensus       462 ~~~~~~~~~R  471 (476)
T 3e6i_A          462 PRYKLCVIPR  471 (476)
T ss_dssp             CCCCEEEEEC
T ss_pred             CCeEEEEEec
Confidence            5799999998


No 13 
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=100.00  E-value=2.1e-73  Score=566.50  Aligned_cols=445  Identities=21%  Similarity=0.363  Sum_probs=356.4

Q ss_pred             CCCCCCCccCCCCHHHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCCeEEEecCCeeEEEecCHHHHHHHHhc
Q 039293           42 GIKGPSYKFFHGNNKEIINMKNEMIMSSSPMELSHQIFPITEPHIYSWIKLYGTNFLMWHGSQAELVVAEPKLIKEIMNN  121 (512)
Q Consensus        42 ~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~vf~~~~~~~~~vvv~dpe~i~~i~~~  121 (512)
                      .+|||+++|++||++.+....                 ..++..+.+|+++||+||++++|+.++++|+||+.+++++.+
T Consensus        13 lpPgP~~~p~~G~~~~~~~~~-----------------~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~vl~~   75 (481)
T 3czh_A           13 FPPGPPGLPFIGNIYSLAASS-----------------ELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVH   75 (481)
T ss_dssp             CCCCCCCBTTTBHHHHHHHCS-----------------SCHHHHHHHHHHHHCSEEEEEETTEEEEEEESHHHHHHHHTT
T ss_pred             CCCCCCCCcccccHhhcCccc-----------------CcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhh
Confidence            689999999999998874310                 013568999999999999999999999999999999999987


Q ss_pred             CC-CCCCCchhh-hHhhhc-Ccee-ccCCchHHHHhhhhcCcCCHHHH--hhhHHHHHHHHHHHHHHHHhhcCCcccHHH
Q 039293          122 NR-SFPKREPRE-YLKLLG-NGLV-TTRGEKWLKKRKLAVNAFHAENL--KNMIPDMIASVDMMLERWRDYEGKEIDAYR  195 (512)
Q Consensus       122 ~~-~~~~~~~~~-~~~~~g-~~l~-~~~g~~w~~~Rr~~~~~~~~~~l--~~~~~~i~~~~~~li~~l~~~~~~~vd~~~  195 (512)
                      +. .|.+++... ...+.+ .+++ ..+|+.|+++|+++.+.|+...+  ..+++.+.++++++++.+.+..++++|+.+
T Consensus        76 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~d~~~  155 (481)
T 3czh_A           76 QSEIFADRPCLPLFMKMTKMGGLLNSRYGRGWVDHRRLAVNSFRYFGYGQKSFESKILEETKFFNDAIETYKGRPFDFKQ  155 (481)
T ss_dssp             TTTTTCBCCCCHHHHHHHTTCSSTTCCSSHHHHHHHHHHHHHHHHTTTTSTTHHHHHHHHHHHHHHHHHTTTTCCBCCHH
T ss_pred             chHhhCCCCCcHHHHhhcCCCCeEeCCCChHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCCCcCHHH
Confidence            75 676544222 333333 4644 46899999999999999876543  678999999999999999865445899999


Q ss_pred             HHHHHhHhHhhhcccCcccccccc-HHHHHHHHHHHHHHhh-----hhcccccccccccCcchhhhHHHHHHHHHHHHHH
Q 039293          196 EIKVLTSEIISRTAFGSCYLEGEN-IFNMLTKMAYIVAKKK-----YKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKV  269 (512)
Q Consensus       196 ~~~~~~~~~i~~~~fG~~~~~~~~-~~~~~~~~~~~~~~~~-----~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~  269 (512)
                      ++..++.++++.++||.+++.++. +......+...+....     ....+|++ ++++....++..++.+.+.+++.+.
T Consensus       156 ~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l-~~lp~~~~~~~~~~~~~~~~~~~~~  234 (481)
T 3czh_A          156 LITNAVSNITNLIIFGERFTYEDTDFQHMIELFSENVELAASASVFLYNAFPWI-GILPFGKHQQLFRNAAVVYDFLSRL  234 (481)
T ss_dssp             HHHHHHHHHHHHHHHSSCCCTTCHHHHHHHHHHHHHHHHTTSHHHHHHHHCGGG-GGCSSSHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHhhhccchhHHhhhhHHH-HhCCchHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999998764332 2222222222221110     23346766 6666544566777888889999999


Q ss_pred             HHHHhhhhhcccccccCCcHHHHHHHhcccc--ccccCCCHHHHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHH
Q 039293          270 VKKRESNVLTGEAESYGNDLLGILMRAYHSA--DETQKISLDDLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKA  347 (512)
Q Consensus       270 i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~--~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l  347 (512)
                      ++++++.  .+  .....|+++.++++..+.  +.+..++++++.+++.++++||+|||+++++|++++|++||++|+|+
T Consensus       235 i~~r~~~--~~--~~~~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl  310 (481)
T 3czh_A          235 IEKASVN--RK--PQLPQHFVDAYLDEMDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQV  310 (481)
T ss_dssp             HHHHHTT--CC--TTCCSSHHHHHHHHHHHTTTCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred             HHHHHHh--cC--CCchHHHHHHHHHHHHhcccCccccccHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHH
Confidence            9888764  11  123579999999764331  12346999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhC-CCCCChhhhccchhHHHHHHhhhccCCCCcc-ccceeccccccCCeeeCCCCEEEEccchhccCCCCcCC
Q 039293          348 RKEVLELLG-QQNPSADNISRLKIVGMIINETLRLYPPFVV-FVREVKKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGE  425 (512)
Q Consensus       348 ~~Ei~~~~~-~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~  425 (512)
                      ++|++++++ ++.++++++++||||+|||+|+||++|+++. ++|.+.+|++++||.||||+.|+++.+++||||++| +
T Consensus       311 ~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~-~  389 (481)
T 3czh_A          311 QKEIDLIMGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYW-R  389 (481)
T ss_dssp             HHHHHHHTCSSSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTC-S
T ss_pred             HHHHHHhcCCCCCCChhhhhhChHHHHHHHHHHhhccccccCcceeecCCeEEeCEEcCCCCEEEechHHHhCCcccC-C
Confidence            999999998 4678999999999999999999999999995 589999999999999999999999999999999999 9


Q ss_pred             CCCCCCCCCCCCCCCccccCCCccccccCCCcccccchHHHHHHHHHHHHHHHhhcEEEeCCCCccC--CCcceeeecCC
Q 039293          426 DFHLYKPERFAQGVPKATSNNMAAFLPFGLGPRTCVGFNFTIIEAKIALSMILRRYKFTLSPNYVHS--PVPRITLCPQH  503 (512)
Q Consensus       426 ~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~~--~~~~~~~~~~~  503 (512)
                      ||++|+||||+++++. ...+. .++|||+|+|.|+|++||++|++++++.||++|++++.++....  ...+++..|. 
T Consensus       390 dP~~F~PeR~l~~~~~-~~~~~-~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~p~-  466 (481)
T 3czh_A          390 DPEVFHPERFLDSSGY-FAKKE-ALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPHELVPDLKPRLGMTLQPQ-  466 (481)
T ss_dssp             STTSCCGGGGBCTTSC-BCCCT-TCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECGGGCCCCCCCCSSSSCCCC-
T ss_pred             CccccCCCceeCCCCC-CcCCc-ceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHheEEeCCCCCCCCcccCCCceecCC-
Confidence            9999999999975332 22344 79999999999999999999999999999999999986543221  2234455555 


Q ss_pred             CceEEEEeC
Q 039293          504 GIQVMLRAL  512 (512)
Q Consensus       504 ~~~v~~~~r  512 (512)
                      .+.+++++|
T Consensus       467 ~~~~~~~~~  475 (481)
T 3czh_A          467 PYLICAERR  475 (481)
T ss_dssp             CCCBEEEEC
T ss_pred             ceEEEEEec
Confidence            688888887


No 14 
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=100.00  E-value=2.8e-74  Score=578.40  Aligned_cols=445  Identities=16%  Similarity=0.255  Sum_probs=339.9

Q ss_pred             CCCCCCCCccCCCCHHHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCCeEEEecCCeeEEEecCHHHHHHHHh
Q 039293           41 QGIKGPSYKFFHGNNKEIINMKNEMIMSSSPMELSHQIFPITEPHIYSWIKLYGTNFLMWHGSQAELVVAEPKLIKEIMN  120 (512)
Q Consensus        41 ~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~vf~~~~~~~~~vvv~dpe~i~~i~~  120 (512)
                      +.+|||+++|++||++.+.+                    +++..+.+|+++||+||++++|+.++|+|+||+++++++.
T Consensus         9 ~~pPgP~~~P~iG~~~~~~~--------------------~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~   68 (507)
T 3pm0_A            9 GKPPGPFAWPLIGNAAAVGQ--------------------AAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALV   68 (507)
T ss_dssp             -------------------C--------------------CHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHT
T ss_pred             CCCcCCCCCCeeCchhhcCc--------------------cHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHH
Confidence            37899999999999988731                    3467899999999999999999999999999999999997


Q ss_pred             cCC-CCCCCch-hhhHhh-hcCceecc-CCchHHHHhhhhcCcCCHHHH------hhhHHHHHHHHHHHHHHHHhhc--C
Q 039293          121 NNR-SFPKREP-REYLKL-LGNGLVTT-RGEKWLKKRKLAVNAFHAENL------KNMIPDMIASVDMMLERWRDYE--G  188 (512)
Q Consensus       121 ~~~-~~~~~~~-~~~~~~-~g~~l~~~-~g~~w~~~Rr~~~~~~~~~~l------~~~~~~i~~~~~~li~~l~~~~--~  188 (512)
                      ++. .|.+++. .....+ .|.++++. +|+.|+++|+++++.|+....      +.+++.+.++++++++.+.+..  +
T Consensus        69 ~~~~~f~~r~~~~~~~~~~~g~~l~~~~~g~~w~~~R~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~  148 (507)
T 3pm0_A           69 QQGSAFADRPSFASFRVVSGGRSMAFGHYSEHWKVQRRAAHSMMRNFFTRQPRSRQVLEGHVLSEARELVALLVRGSADG  148 (507)
T ss_dssp             TTTTTSCBCCCCHHHHHGGGGTCSSSSCSSHHHHHHHHHHHHHHHHSTTSSTTHHHHHHHHHHHHHHHHHHHHHHTTGGG
T ss_pred             hCcHhhCCCCcchHHHhhcCCCceEECCCChHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHhhcccC
Confidence            665 7764443 223322 46777554 699999999999987654332      3489999999999999997643  2


Q ss_pred             CcccHHHHHHHHhHhHhhhcccCccccccccHHHHH----HHHHHHHHHhhhhcccccccccccCc---chhhhHHHHHH
Q 039293          189 KEIDAYREIKVLTSEIISRTAFGSCYLEGENIFNML----TKMAYIVAKKKYKLEIPGIGKLLKTN---DDIESDKLEQD  261 (512)
Q Consensus       189 ~~vd~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~P~l~~~~~~~---~~~~~~~~~~~  261 (512)
                      +++|+.+++..+++++++.++||.+++..+.....+    ..+............+|++ ++++..   ..+...++.+.
T Consensus       149 ~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l-~~lp~~~~~~~~~~~~~~~~  227 (507)
T 3pm0_A          149 AFLDPRPLTVVAVANVMSAVCFGCRYSHDDPEFRELLSHNEEFGRTVGAGSLVDVMPWL-QYFPNPVRTVFREFEQLNRN  227 (507)
T ss_dssp             CCBCCHHHHHHHHHHHHHHHHTSCCCCTTCHHHHHHTSCHHHHHHHHSTTCCTTTCGGG-GGSCSHHHHHHHHHHHHHHH
T ss_pred             CCcChHHHHHHHHHHHHHHHHccccCCCCCHHHHHHHHHHHHHHHhcccchHHHHhHHH-HHcCchhHHHHHHHHHHHHH
Confidence            489999999999999999999999887544322222    1222222222234456766 666654   34566777788


Q ss_pred             HHHHHHHHHHHHhhhhhcccccccCCcHHHHHHHhcccccc------ccCCCHHHHHHHHHHHHHhchhhhHHHHHHHHH
Q 039293          262 IRDSIIKVVKKRESNVLTGEAESYGNDLLGILMRAYHSADE------TQKISLDDLIDECKTFYVAGTDTTASLLSWTIF  335 (512)
Q Consensus       262 ~~~~l~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~------~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~  335 (512)
                      +.+++.+.++++++.  .+. .....|+++.++........      +..++++++.+++.++++||+|||+++++|+++
T Consensus       228 ~~~~~~~~i~~~~~~--~~~-~~~~~d~l~~ll~~~~~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~  304 (507)
T 3pm0_A          228 FSNFILDKFLRHCES--LRP-GAAPRDMMDAFILSAEKKAAGDSHGGGARLDLENVPATITDIFGASQDTLSTALQWLLL  304 (507)
T ss_dssp             HHHHHHHHHHHHHHH--CCT-TCCCCSHHHHHHHHHHHHHSCC----CCCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhc--ccc-ccCCccHHHHHHHHhhhhccccccCCCCCCCHHHHHHHHHHHHhcccchHHHHHHHHHH
Confidence            888888888887765  211 13467999999965432211      225899999999999999999999999999999


Q ss_pred             HHhhChHHHHHHHHHHHHHhC-CCCCChhhhccchhHHHHHHhhhccCCCCcc-ccceeccccccCCeeeCCCCEEEEcc
Q 039293          336 LLAIHSDWQDKARKEVLELLG-QQNPSADNISRLKIVGMIINETLRLYPPFVV-FVREVKKEVKLGDLIVPANVDVTIPV  413 (512)
Q Consensus       336 ~L~~~p~~~~~l~~Ei~~~~~-~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~~~g~~IpkG~~v~~~~  413 (512)
                      +|++||++|+|+++||+++++ ++.++++++.+||||+|||+|+||++|++|. ++|.+.+|++++||.||||+.|+++.
T Consensus       305 ~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~  384 (507)
T 3pm0_A          305 LFTRYPDVQTRVQAELDQVVGRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQ  384 (507)
T ss_dssp             HHHHCHHHHHHHHHHHHHHTCTTSCCCGGGGGGCHHHHHHHHHHHHHHCSSCBCSCEECSSCEEETTEEECTTCEEEEBS
T ss_pred             HHHhCHHHHHHHHHHHHHhcCCCCCCChhhcccChHHHHHHHHHHhcCCCcccCCCccccCCceEcCEEECCCCEEEeCh
Confidence            999999999999999999998 4678999999999999999999999999997 58999999999999999999999999


Q ss_pred             chhccCCCCcCCCCCCCCCCCCCCCCCcccc-CCCccccccCCCcccccchHHHHHHHHHHHHHHHhhcEEEeCCCCccC
Q 039293          414 IAVHHDPQIWGEDFHLYKPERFAQGVPKATS-NNMAAFLPFGLGPRTCVGFNFTIIEAKIALSMILRRYKFTLSPNYVHS  492 (512)
Q Consensus       414 ~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~-~~~~~~~~Fg~G~r~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~~  492 (512)
                      +++||||++| +||++|+||||+++++.... .+. .++|||+|+|.|+|++||++|++++++.||++|++++.++....
T Consensus       385 ~~~~~d~~~~-~dp~~F~PeRfl~~~~~~~~~~~~-~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~  462 (507)
T 3pm0_A          385 WSVNHDPLKW-PNPENFDPARFLDKDGLINKDLTS-RVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNEPAK  462 (507)
T ss_dssp             HHHHSCTTTC-SSSSSCCGGGGBCTTSCBCHHHHT-TCCSSCCSTTCCSCHHHHHHHHHHHHHHHHHHEEEEECTTCCSC
T ss_pred             HHHhCCcccC-CCcCccCCCcccCCCCcccCCCcc-cccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHeEEecCCCCCCC
Confidence            9999999999 99999999999986443221 123 78999999999999999999999999999999999998764332


Q ss_pred             C--CcceeeecCCCceEEEEeC
Q 039293          493 P--VPRITLCPQHGIQVMLRAL  512 (512)
Q Consensus       493 ~--~~~~~~~~~~~~~v~~~~r  512 (512)
                      .  ..+++..|. +++|++++|
T Consensus       463 ~~~~~~~~~~p~-~~~v~~~~R  483 (507)
T 3pm0_A          463 MNFSYGLTIKPK-SFKVNVTLR  483 (507)
T ss_dssp             CCEEESSSEEEC-SCCEEEEES
T ss_pred             CCCCCCccccCC-CcEEEEEEc
Confidence            2  223455565 579999987


No 15 
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ...
Probab=100.00  E-value=5.6e-74  Score=568.57  Aligned_cols=439  Identities=23%  Similarity=0.382  Sum_probs=350.8

Q ss_pred             CCCCCCCCccCCCCHHHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCCeEEEecCCeeEEEecCHHHHHHHHh
Q 039293           41 QGIKGPSYKFFHGNNKEIINMKNEMIMSSSPMELSHQIFPITEPHIYSWIKLYGTNFLMWHGSQAELVVAEPKLIKEIMN  120 (512)
Q Consensus        41 ~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~vf~~~~~~~~~vvv~dpe~i~~i~~  120 (512)
                      +.+|||+++|++||++.+..                   ++.+..+.+|+++||+||++++++.+.++|+||+.+++++.
T Consensus         3 ~~~PGP~~~p~iG~l~~~~~-------------------~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~~~~~~~il~   63 (470)
T 2ij2_A            3 KEMPQPKTFGELKNLPLLNT-------------------DKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACD   63 (470)
T ss_dssp             CCCCCCCCCGGGTTGGGGCS-------------------SCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHTC
T ss_pred             CCCCCCCCCCccccHHHHhc-------------------ccchHHHHHHHHHhCCeEEEecCCccEEEECCHHHHHHHHh
Confidence            37999999999999887621                   23456788999999999999999989999999999999996


Q ss_pred             cCCCCCCCchhh---hHhhhcCceecc--CCchHHHHhhhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhc-CCcccHH
Q 039293          121 NNRSFPKREPRE---YLKLLGNGLVTT--RGEKWLKKRKLAVNAFHAENLKNMIPDMIASVDMMLERWRDYE-GKEIDAY  194 (512)
Q Consensus       121 ~~~~~~~~~~~~---~~~~~g~~l~~~--~g~~w~~~Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~-~~~vd~~  194 (512)
                      +. .|.+.....   .....|.++++.  +|+.|+++||++.+.|+...++.+.+.+.+.++++++.|.... ++++|+.
T Consensus        64 ~~-~f~~~~~~~~~~~~~~~~~~l~~~~~~g~~w~~~Rr~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~vd~~  142 (470)
T 2ij2_A           64 ES-RFDKNLSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVP  142 (470)
T ss_dssp             TT-TEEECCCHHHHHHHHHHTTSGGGSCTTSHHHHHHHHHHGGGGSTTTHHHHHHHHHHHHHHHHHHHHTCCTTCCEEHH
T ss_pred             hc-CcCcCchhHHHHHHHhcCCceEEcCCCchHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEEHH
Confidence            53 354422111   233456788776  7999999999999999999999999999999999999997643 2489999


Q ss_pred             HHHHHHhHhHhhhcccCcccccc--ccHHHHHHHHHHHHHHhhhhcc-cccccccccCcchhhhHHHHHHHHHHHHHHHH
Q 039293          195 REIKVLTSEIISRTAFGSCYLEG--ENIFNMLTKMAYIVAKKKYKLE-IPGIGKLLKTNDDIESDKLEQDIRDSIIKVVK  271 (512)
Q Consensus       195 ~~~~~~~~~~i~~~~fG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~  271 (512)
                      +++..+++++|+.++||.+++..  +........+...+........ .|++ .+++....+...++.+.+.+++.+.++
T Consensus       143 ~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~  221 (470)
T 2ij2_A          143 EDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPD-DPAYDENKRQFQEDIKVMNDLVDKIIA  221 (470)
T ss_dssp             HHHHHHHHHHHHHHHHSCCCCGGGCSSCCHHHHHHHHHHHHHHHTC---CTT-SGGGHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCcccccccCCCCHHHHHHHHHHHHHHHHHhhhhhH-hhccchHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999987532  2111122222222211111111 1322 333333344556667788888889888


Q ss_pred             HHhhhhhcccccccCCcHHHHHHHhccccccccCCCHHHHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHHHH
Q 039293          272 KRESNVLTGEAESYGNDLLGILMRAYHSADETQKISLDDLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARKEV  351 (512)
Q Consensus       272 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei  351 (512)
                      ++++.      .....|+++.|++...++ .+..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|+
T Consensus       222 ~r~~~------~~~~~dll~~ll~~~~~~-~~~~ls~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei  294 (470)
T 2ij2_A          222 DRKAS------GEQSDDLLTHMLNGKDPE-TGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEA  294 (470)
T ss_dssp             HHHHH------CCCCSSHHHHHHHCCCTT-TCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred             HHHhc------ccCchhHHHHHHhccCcc-cCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence            87754      223579999999875432 23569999999999999999999999999999999999999999999999


Q ss_pred             HHHhCCCCCChhhhccchhHHHHHHhhhccCCCCccccceeccccccCC-eeeCCCCEEEEccchhccCCCCcCCCCCCC
Q 039293          352 LELLGQQNPSADNISRLKIVGMIINETLRLYPPFVVFVREVKKEVKLGD-LIVPANVDVTIPVIAVHHDPQIWGEDFHLY  430 (512)
Q Consensus       352 ~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~~~g-~~IpkG~~v~~~~~~~~~d~~~~~~~p~~F  430 (512)
                      +++++++.++++++.+||||+|||+|+||++|+++..+|.+.+|++++| |.||||+.|+++.+++||||++||+||++|
T Consensus       295 ~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~r~~~~d~~~~g~~~Ip~Gt~V~~~~~~~~rdp~~~g~dP~~F  374 (470)
T 2ij2_A          295 ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF  374 (470)
T ss_dssp             HHHCCSSSCCHHHHHTCHHHHHHHHHHHHHSCSSCEEEEEESSCEEETTTEEECTTCEEEEEHHHHTTCHHHHCSCTTSC
T ss_pred             HHHcCCCCCCHHHHhCCHHHHHHHHHHHhcCCCccccceeccCCcccCCceEeCCCCEEEechHHhcCCHhhhCCCcccc
Confidence            9999977799999999999999999999999999998999999999999 999999999999999999999998999999


Q ss_pred             CCCCCCCCCCccccCCCccccccCCCcccccchHHHHHHHHHHHHHHHhhcEEEeCCCCccCCCcceeeecCCCceEEEE
Q 039293          431 KPERFAQGVPKATSNNMAAFLPFGLGPRTCVGFNFTIIEAKIALSMILRRYKFTLSPNYVHSPVPRITLCPQHGIQVMLR  510 (512)
Q Consensus       431 ~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  510 (512)
                      +|||| +.  .....+. .++|||.|+|.|+|++||++|++++++.||++|+++..++........++..|. +++|+++
T Consensus       375 ~PeR~-~~--~~~~~~~-~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~p~-~~~v~~~  449 (470)
T 2ij2_A          375 RPERF-EN--PSAIPQH-AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE-GFVVKAK  449 (470)
T ss_dssp             CGGGG-SS--GGGSCTT-SCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEECTTCCCCCEEESSSEEET-TCEEEEE
T ss_pred             Ccccc-CC--CCcCCCc-cccCCCCCCCcCCcHHHHHHHHHHHHHHHHHHeeEeeCCCCccccccceEecCC-CeEEEEE
Confidence            99999 32  1122234 789999999999999999999999999999999999323222222234567788 9999999


Q ss_pred             eC
Q 039293          511 AL  512 (512)
Q Consensus       511 ~r  512 (512)
                      +|
T Consensus       450 ~R  451 (470)
T 2ij2_A          450 SK  451 (470)
T ss_dssp             EC
T ss_pred             Ec
Confidence            87


No 16 
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=100.00  E-value=4.6e-74  Score=573.64  Aligned_cols=443  Identities=20%  Similarity=0.305  Sum_probs=351.4

Q ss_pred             CCCCCCCccCCCCHHHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCCeEEEecCCeeEEEecCHHHHHHHHhc
Q 039293           42 GIKGPSYKFFHGNNKEIINMKNEMIMSSSPMELSHQIFPITEPHIYSWIKLYGTNFLMWHGSQAELVVAEPKLIKEIMNN  121 (512)
Q Consensus        42 ~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~vf~~~~~~~~~vvv~dpe~i~~i~~~  121 (512)
                      .+|||+++|++||++.+.+                    +++..+.+|+++||+||++++|+.++++++||+++++++.+
T Consensus        17 ~~PgP~~~p~~G~~~~~~~--------------------~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~i~~il~~   76 (495)
T 2hi4_A           17 SPPEPWGWPLLGHVLTLGK--------------------NPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVR   76 (495)
T ss_dssp             CCCCCCCBTTTBTHHHHTT--------------------CHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTT
T ss_pred             CCCCCCCCcceeeHHhcCc--------------------cHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHh
Confidence            5699999999999987631                    34567899999999999999999999999999999999987


Q ss_pred             CC-CCCCCc-hhhhHhh-hcCceecc--CCchHHHHhhhhcCcCCHH---HH---h---hhHHHHHHHHHHHHHHHHh--
Q 039293          122 NR-SFPKRE-PREYLKL-LGNGLVTT--RGEKWLKKRKLAVNAFHAE---NL---K---NMIPDMIASVDMMLERWRD--  185 (512)
Q Consensus       122 ~~-~~~~~~-~~~~~~~-~g~~l~~~--~g~~w~~~Rr~~~~~~~~~---~l---~---~~~~~i~~~~~~li~~l~~--  185 (512)
                      +. .|.+++ ......+ .|.++++.  +|+.|+++|+++.+.|+..   .+   .   .+++.+.++++++++.|.+  
T Consensus        77 ~~~~f~~r~~~~~~~~~~~~~~l~~~~~~g~~w~~~Rr~~~~~f~~~s~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~  156 (495)
T 2hi4_A           77 QGDDFKGRPDLYTSTLITDGQSLTFSTDSGPVWAARRRLAQNALNTFSIASDPASSSSCYLEEHVSKEAKALISRLQELM  156 (495)
T ss_dssp             TGGGSCBCCCCHHHHTSTTSCCTTTSSCCSHHHHHHHHHHHHHHHHTTTSBCSSCSSCBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cchhhCCCCCcHHHHHhcCCCCEEEcCCCChHHHHHHHHHHHHHHHhccCcccccchhhhHHHHHHHHHHHHHHHHHHhc
Confidence            65 676443 2223222 25677777  6999999999999876432   22   1   6899999999999999976  


Q ss_pred             hcCCcccHHHHHHHHhHhHhhhcccCccccccccHHHHHHHHHHHHHHh----hhhcccccccccccCcchhhhHHHHHH
Q 039293          186 YEGKEIDAYREIKVLTSEIISRTAFGSCYLEGENIFNMLTKMAYIVAKK----KYKLEIPGIGKLLKTNDDIESDKLEQD  261 (512)
Q Consensus       186 ~~~~~vd~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~P~l~~~~~~~~~~~~~~~~~~  261 (512)
                      ..++++|+..++..+++|+|+.++||.+++.++.....+......+...    .....+|++ ++++....++..++.+.
T Consensus       157 ~~~~~~d~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l-~~lp~~~~~~~~~~~~~  235 (495)
T 2hi4_A          157 AGPGHFDPYNQVVVSVANVIGAMCFGQHFPESSDEMLSLVKNTHEFVETASSGNPLDFFPIL-RYLPNPALQRFKAFNQR  235 (495)
T ss_dssp             HTTSCBCHHHHHHHHHHHHHHHHHHGGGSCTTCHHHHHHHTTTHHHHTTSSTTCGGGTCGGG-GGSCCHHHHHHHHHHHH
T ss_pred             cCCCccchHHHHHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccchHHHHhHHH-HhcCchHHHHHHHHHHH
Confidence            3345899999999999999999999998764332222211111111111    123346766 55665445566777888


Q ss_pred             HHHHHHHHHHHHhhhhhcccccccCCcHHHHHHHhcccc--ccccCCCHHHHHHHHHHHHHhchhhhHHHHHHHHHHHhh
Q 039293          262 IRDSIIKVVKKRESNVLTGEAESYGNDLLGILMRAYHSA--DETQKISLDDLIDECKTFYVAGTDTTASLLSWTIFLLAI  339 (512)
Q Consensus       262 ~~~~l~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~--~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~  339 (512)
                      +.+++.+.++++++.  .+  .....|+++.++++..+.  +++..++++++.+++.++++||+|||+++++|++++|++
T Consensus       236 ~~~~~~~~i~~r~~~--~~--~~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~  311 (495)
T 2hi4_A          236 FLWFLQKTVQEHYQD--FD--KNSVRDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVT  311 (495)
T ss_dssp             HHHHHHHHHHHHHHT--CC--TTCCCSHHHHHHHHHHHCCEETTEECCTHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHh--hc--ccccccHHHHHHHHhhhccCccccCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhh
Confidence            899999999888765  11  123479999999653221  123468999999999999999999999999999999999


Q ss_pred             ChHHHHHHHHHHHHHhC-CCCCChhhhccchhHHHHHHhhhccCCCCcc-ccceeccccccCCeeeCCCCEEEEccchhc
Q 039293          340 HSDWQDKARKEVLELLG-QQNPSADNISRLKIVGMIINETLRLYPPFVV-FVREVKKEVKLGDLIVPANVDVTIPVIAVH  417 (512)
Q Consensus       340 ~p~~~~~l~~Ei~~~~~-~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~~~g~~IpkG~~v~~~~~~~~  417 (512)
                      ||++|+|+++||+++++ ++.++++++.+||||+|||+|+||++|+++. ++|.+.+|++++||.||||+.|.++.+++|
T Consensus       312 ~P~~~~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~  391 (495)
T 2hi4_A          312 KPEIQRKIQKELDTVIGRERRPRLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVN  391 (495)
T ss_dssp             CHHHHHHHHHHHHHHTTTSSCCCGGGSTTCHHHHHHHHHHHHHHCSSCBCSCEECSSCEEETTEEECTTCEEEEBHHHHH
T ss_pred             CHHHHHHHHHHHHHhcCCCCCCChHHhccCHHHHHHHHHHHHccCCccCCCccccCCCeeEeCeEECCCCEEEeChHHhh
Confidence            99999999999999998 4568999999999999999999999999996 589999999999999999999999999999


Q ss_pred             cCCCCcCCCCCCCCCCCCCCCCCccc--cCCCccccccCCCcccccchHHHHHHHHHHHHHHHhhcEEEeCCCCccC--C
Q 039293          418 HDPQIWGEDFHLYKPERFAQGVPKAT--SNNMAAFLPFGLGPRTCVGFNFTIIEAKIALSMILRRYKFTLSPNYVHS--P  493 (512)
Q Consensus       418 ~d~~~~~~~p~~F~P~Rfl~~~~~~~--~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~~--~  493 (512)
                      |||++| +||++|+||||+++++...  ..+. .++|||+|+|.|+|++||++|++++++.||++|++++.++..+.  .
T Consensus       392 rdp~~~-~dP~~F~PeRfl~~~~~~~~~~~~~-~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~  469 (495)
T 2hi4_A          392 HDPELW-EDPSEFRPERFLTADGTAINKPLSE-KMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVKVDLTP  469 (495)
T ss_dssp             HCTTTC-SSTTSCCGGGGBCTTSSSBCHHHHT-TCCCSCCGGGCCTTHHHHHHHHHHHHHHHHHHCEEECCTTCCCCCCC
T ss_pred             CCcccC-CCcCccCcccccCCCCcccccCCCC-ceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEeCCCCCCCCccc
Confidence            999999 9999999999997543211  1233 78999999999999999999999999999999999987654322  2


Q ss_pred             CcceeeecCCCceEEEEeC
Q 039293          494 VPRITLCPQHGIQVMLRAL  512 (512)
Q Consensus       494 ~~~~~~~~~~~~~v~~~~r  512 (512)
                      ..+++..|...++|+++ |
T Consensus       470 ~~~~~~~p~~~~~v~~~-R  487 (495)
T 2hi4_A          470 IYGLTMKHARCEHVQAR-R  487 (495)
T ss_dssp             BCSSSCBCCCCCCBEEE-C
T ss_pred             cCCceecCCCcceEEEE-E
Confidence            33556667643388887 6


No 17 
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Probab=100.00  E-value=5.7e-73  Score=560.30  Aligned_cols=434  Identities=17%  Similarity=0.276  Sum_probs=360.7

Q ss_pred             CCCCCCCC-ccCCCCHHHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhC-CeEEEecCCeeEEEecCHHHHHHH
Q 039293           41 QGIKGPSY-KFFHGNNKEIINMKNEMIMSSSPMELSHQIFPITEPHIYSWIKLYG-TNFLMWHGSQAELVVAEPKLIKEI  118 (512)
Q Consensus        41 ~~~Pgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG-~vf~~~~~~~~~vvv~dpe~i~~i  118 (512)
                      +.||||++ +|++||++.+.+                    +.+.++.+|+++|| +||++++++.++|+++||++++++
T Consensus         3 ~~PPg~p~~~P~iG~~~~~~~--------------------~~~~~~~~~~~~yG~~i~~~~~~~~~~vvv~~p~~~~~i   62 (450)
T 3gw9_A            3 KLPPVYPVTVPILGHIIQFGK--------------------SPLGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEHSRF   62 (450)
T ss_dssp             SCCCBCCCCSTTTBTHHHHHH--------------------CHHHHHHHHHHHHTCSEEEEEETTEEEEEECCGGGTHHH
T ss_pred             CCCCCCCCCcchhccHHHHcc--------------------CHHHHHHHHHHHhCCCeEEEEECCEeEEEEeCHHHHHHH
Confidence            46899665 999999998853                    23567899999999 999999999999999999999999


Q ss_pred             HhcCC-CCCCCchhh-hHhhhcCceec-cCCchHHHHhhhhcCcCCHHHHhhhHHHHHHHHHHHHH-HHHhhcCCcccHH
Q 039293          119 MNNNR-SFPKREPRE-YLKLLGNGLVT-TRGEKWLKKRKLAVNAFHAENLKNMIPDMIASVDMMLE-RWRDYEGKEIDAY  194 (512)
Q Consensus       119 ~~~~~-~~~~~~~~~-~~~~~g~~l~~-~~g~~w~~~Rr~~~~~~~~~~l~~~~~~i~~~~~~li~-~l~~~~~~~vd~~  194 (512)
                      +.++. .|..+.... ...++|.|+++ .+++.|+++|+++.+.|+...++.+.+.+.++++++++ .|.+ .++++|+.
T Consensus        63 l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~ll~~~~~~-~~~~vd~~  141 (450)
T 3gw9_A           63 FLPRNEVLSPREVYSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKFMAANWDK-DEGEINLL  141 (450)
T ss_dssp             HSSCTTTEESTGGGGGGHHHHCTTSGGGSCHHHHHHHHHHHHHTTSGGGCTTHHHHHHHHHHHHHHHHSCS-SEEEEEHH
T ss_pred             HhCChhhccchhhHHHHHHHhcCCcccCCCcHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcc-CCCcccHH
Confidence            98876 666665444 56677888766 46999999999999999999999999999999999999 6643 23589999


Q ss_pred             HHHHHHhHhHhhhcccCccccccccHHHHHHHHHHHHHHh--hhhcccccccccccCcchhhhHHHHHHHHHHHHHHHHH
Q 039293          195 REIKVLTSEIISRTAFGSCYLEGENIFNMLTKMAYIVAKK--KYKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKVVKK  272 (512)
Q Consensus       195 ~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~  272 (512)
                      +++..+++++++.++||.+.....+... +......+...  .....+|++ ++++....++..++.+.+.+++.+.+++
T Consensus       142 ~~~~~~~~~~i~~~~fG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~P~l-~~lp~~~~~~~~~~~~~~~~~~~~~i~~  219 (450)
T 3gw9_A          142 EDCSTMIINTACQCLFGEDLRKRLDARR-FAQLLAKMESSLIPAAVFLPIL-LKLPLPQSARCHEARTELQKILSEIIIA  219 (450)
T ss_dssp             HHHHHHHHHHHHHHHSCHHHHHHSCHHH-HHHHHHHHHHTCCGGGGTCGGG-GGSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCcchhhhhhhHH-HHHHHHHHHhccccchhcccch-hccCCchhHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999988754322222 21222222111  123356766 6666655666778888999999999988


Q ss_pred             HhhhhhcccccccCCcHHHHHHHhccccccccCCCHHHHHHHHHHHHHhchhhhHHHHHHHHHHHh--hChHHHHHHHHH
Q 039293          273 RESNVLTGEAESYGNDLLGILMRAYHSADETQKISLDDLIDECKTFYVAGTDTTASLLSWTIFLLA--IHSDWQDKARKE  350 (512)
Q Consensus       273 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~--~~p~~~~~l~~E  350 (512)
                      +++.  .........|+++.++++..++  +..++++++.++++.+++||+|||+++++|++++|+  +||++|+|+++|
T Consensus       220 r~~~--~~~~~~~~~d~l~~ll~~~~~~--~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~~~p~~~~~l~~E  295 (450)
T 3gw9_A          220 RKEE--EVNKDSSTSDLLSGLLSAVYRD--GTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKE  295 (450)
T ss_dssp             HHHH--HHHTSCCCCSHHHHHHHCBCTT--SCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGHHHHHHHHHH
T ss_pred             HHHh--hcccCCccchHHHHHHHhhccC--CCCCCHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHcCCcchhHHHHHHHH
Confidence            8754  2122345689999999876543  456999999999999999999999999999999999  999999999999


Q ss_pred             HHHHhCCCCCChhhh-ccchhHHHHHHhhhccCCCCccccceeccccccCCeeeCCCCEEEEccchhccCCCCcCCCCCC
Q 039293          351 VLELLGQQNPSADNI-SRLKIVGMIINETLRLYPPFVVFVREVKKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGEDFHL  429 (512)
Q Consensus       351 i~~~~~~~~~~~~~~-~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~p~~  429 (512)
                      ++++  ++.++++++ .+||||+|||+|+||++|+++.++|.+.+|++++||.|||||.|+++.+++||||++| +||++
T Consensus       296 i~~~--~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~-~dp~~  372 (450)
T 3gw9_A          296 IEEF--PAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAF-PEPRR  372 (450)
T ss_dssp             HTTC--CSSCCHHHHHHHCHHHHHHHHHHHHHSCSCCCEEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTS
T ss_pred             HHhc--cCCCChHHHHHhcHHHHHHHHHHHHhCCchhccccccccccccCCEEECCCCEEEEChHHhhCChhhc-CCccc
Confidence            9988  566899999 9999999999999999999998899999999999999999999999999999999999 99999


Q ss_pred             CCCCCCCCCCCccccCCCccccccCCCcccccchHHHHHHHHHHHHHHHhhcEEEeCCCCccCC-CcceeeecC-CCceE
Q 039293          430 YKPERFAQGVPKATSNNMAAFLPFGLGPRTCVGFNFTIIEAKIALSMILRRYKFTLSPNYVHSP-VPRITLCPQ-HGIQV  507 (512)
Q Consensus       430 F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~~~-~~~~~~~~~-~~~~v  507 (512)
                      |+|||+..       .+. .++|||+|+|.|+|++||++|++++++.||++|++++.++..+.+ ...++..|. .++.|
T Consensus       373 F~PeR~~~-------~~~-~~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~v  444 (450)
T 3gw9_A          373 WDPERDEK-------VEG-AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRDEVPDPDYHTMVVGPTASQCRV  444 (450)
T ss_dssp             CCTTCCCS-------STT-CCCTTCCGGGCCSSHHHHHHHHHHHHHHHHHHEEEEESSSSCCCEETTSSSCEECGGGCEE
T ss_pred             cCCCcCcC-------CCC-ceeCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEecCCCCCCCccccceecCCCCceEe
Confidence            99999321       133 799999999999999999999999999999999999985533322 234667788 89999


Q ss_pred             EEEeC
Q 039293          508 MLRAL  512 (512)
Q Consensus       508 ~~~~r  512 (512)
                      ++++|
T Consensus       445 ~~~~R  449 (450)
T 3gw9_A          445 KYIRR  449 (450)
T ss_dssp             EEEEC
T ss_pred             Eeeec
Confidence            99998


No 18 
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=100.00  E-value=5.9e-73  Score=559.22  Aligned_cols=433  Identities=19%  Similarity=0.265  Sum_probs=331.8

Q ss_pred             CCCC-CCCccCCCCHHHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCCeEEEecCCeeEEEecCHHHHHHHHh
Q 039293           42 GIKG-PSYKFFHGNNKEIINMKNEMIMSSSPMELSHQIFPITEPHIYSWIKLYGTNFLMWHGSQAELVVAEPKLIKEIMN  120 (512)
Q Consensus        42 ~~Pg-p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~vf~~~~~~~~~vvv~dpe~i~~i~~  120 (512)
                      .+|| |+++|++||++.+..                    +++.++.+++++||+||++++++.++++|+||+.+++++.
T Consensus         5 ~PPg~p~~~P~iG~~~~~~~--------------------~~~~~~~~l~~~yG~v~~~~~~~~~~~vv~~~~~~~~il~   64 (455)
T 2cib_A            5 ALPRVSGGHDEHGHLEEFRT--------------------DPIGLMQRVRDELGDVGTFQLAGKQVVLLSGSHANEFFFR   64 (455)
T ss_dssp             CCCBCSCCCBTTBTHHHHTT--------------------CHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHH
T ss_pred             CCCCCCCCCCCccCHHHHhh--------------------ChHHHHHHHHHHcCCEEEEEeCCceEEEECCHHHHHHHHh
Confidence            6887 889999999988732                    3356889999999999999999999999999999999998


Q ss_pred             cCC-CCCCCchhh-hHhhhcCceeccCCchHHHHhhhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhcCCcccHHHHHH
Q 039293          121 NNR-SFPKREPRE-YLKLLGNGLVTTRGEKWLKKRKLAVNAFHAENLKNMIPDMIASVDMMLERWRDYEGKEIDAYREIK  198 (512)
Q Consensus       121 ~~~-~~~~~~~~~-~~~~~g~~l~~~~g~~w~~~Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~~~~vd~~~~~~  198 (512)
                      +++ .|.++.... ...++|.+++ .+|+.|+++|+++.+.|+..+++.+.+.+.++++++++.|..  ++++|+.+++.
T Consensus        65 ~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~~~~--~~~vd~~~~~~  141 (455)
T 2cib_A           65 AGDDDLDQAKAYPFMTPIFGEGVV-FDASPERRKEMLHNAALRGEQMKGHAATIEDQVRRMIADWGE--AGEIDLLDFFA  141 (455)
T ss_dssp             CCTTTEECTTSCGGGHHHHC---------------------CCHHHHHHHHHHHHHHHHHHHTTCCS--EEEEEHHHHHH
T ss_pred             cCccccCcccchhHHHhhcCCccc-cCcHHHHHHHhhhccccCHHHHHHHHHHHHHHHHHHHHHhCC--CCcEeHHHHHH
Confidence            764 665544322 3445676654 579999999999999999999999999999999999998754  25899999999


Q ss_pred             HHhHhHhhhcccCcccccc--ccHHHHHHHHHHHHHHhh--hhcccccccccccCcchhhhHHHHHHHHHHHHHHHHHHh
Q 039293          199 VLTSEIISRTAFGSCYLEG--ENIFNMLTKMAYIVAKKK--YKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKVVKKRE  274 (512)
Q Consensus       199 ~~~~~~i~~~~fG~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~  274 (512)
                      .+++++++.++||.+++..  +.+.+.+..    +....  ....+|+    ++....++..++...+.+++.+.+++++
T Consensus       142 ~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~p~----l~~~~~~~~~~~~~~~~~~~~~~i~~r~  213 (455)
T 2cib_A          142 ELTIYTSSACLIGKKFRDQLDGRFAKLYHE----LERGTDPLAYVDPY----LPIESFRRRDEARNGLVALVADIMNGRI  213 (455)
T ss_dssp             HHHHHHHHHHHTCHHHHTTCCHHHHHHHHH----HHTTCCGGGGTCTT----CSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCcchhhhHHHHHHHHH----HHhhhhHHHHhccc----CCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999987542  222222222    11111  1112232    2322234556677788889999988887


Q ss_pred             hhhhcccccccCCcHHHHHHHhccccccccC-CCHHHHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHHHHHH
Q 039293          275 SNVLTGEAESYGNDLLGILMRAYHSADETQK-ISLDDLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARKEVLE  353 (512)
Q Consensus       275 ~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~-l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~  353 (512)
                      +.  ... .....|+++.|+++..++  +.. ++++++.+++.++++||+|||+++++|++++|++||++|+|+++|+++
T Consensus       214 ~~--~~~-~~~~~dll~~ll~~~~~~--~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~Ei~~  288 (455)
T 2cib_A          214 AN--PPT-DKSDRDMLDVLIAVKAET--GTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDE  288 (455)
T ss_dssp             HC--C------CCCHHHHHHHCBCTT--SSBSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred             hc--ccC-CCCcccHHHHHHHhhhhc--CCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence            65  111 112349999999875432  334 899999999999999999999999999999999999999999999999


Q ss_pred             HhCC-CCCChhhhccchhHHHHHHhhhccCCCCccccceeccccccCCeeeCCCCEEEEccchhccCCCCcCCCCCCCCC
Q 039293          354 LLGQ-QNPSADNISRLKIVGMIINETLRLYPPFVVFVREVKKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGEDFHLYKP  432 (512)
Q Consensus       354 ~~~~-~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~p~~F~P  432 (512)
                      ++++ ..++++++.+||||+|||+|+||++|+++.++|.+.+|++++||.||||+.|+++.+++||||++| +||++|+|
T Consensus       289 ~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~P  367 (455)
T 2cib_A          289 LYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDF-PDPHDFVP  367 (455)
T ss_dssp             HGGGCCCHHHHTTSCCHHHHHHHHHHHHHSCSCCCEEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCG
T ss_pred             HhCCCCCCCHHHHhcCHHHHHHHHHHHhcCCcccccceeeCCCceECCEEECCCCEEEEChHHhcCCcccC-CCccccCc
Confidence            9985 568899999999999999999999999988899999999999999999999999999999999999 99999999


Q ss_pred             CCCCCCCCccccCCCccccccCCCcccccchHHHHHHHHHHHHHHHhhcEEEeCCCCccC--CCcceeeecCCCceEEEE
Q 039293          433 ERFAQGVPKATSNNMAAFLPFGLGPRTCVGFNFTIIEAKIALSMILRRYKFTLSPNYVHS--PVPRITLCPQHGIQVMLR  510 (512)
Q Consensus       433 ~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~~--~~~~~~~~~~~~~~v~~~  510 (512)
                      |||++.+.....++. .++|||+|+|.|+|++||++|++++++.||++|++++.......  ....++..|..+++|+++
T Consensus       368 eR~l~~~~~~~~~~~-~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~  446 (455)
T 2cib_A          368 ARYEQPRQEDLLNRW-TWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPESYRNDHSKMVVQLAQPAAVRYR  446 (455)
T ss_dssp             GGGSTTTCHHHHCTT-TCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHEEEEESSCGGGCCEECSSSSCEECSCCEEEEE
T ss_pred             ccCCCCCcccccCCc-cccCCCCCCCCCCcHHHHHHHHHHHHHHHHHheEEEeCCCccccccccccccccCCCCceEEEE
Confidence            999975332222244 79999999999999999999999999999999999986321111  012345678889999999


Q ss_pred             eC
Q 039293          511 AL  512 (512)
Q Consensus       511 ~r  512 (512)
                      +|
T Consensus       447 ~R  448 (455)
T 2cib_A          447 RR  448 (455)
T ss_dssp             EC
T ss_pred             EC
Confidence            87


No 19 
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=100.00  E-value=1.5e-73  Score=571.28  Aligned_cols=417  Identities=21%  Similarity=0.299  Sum_probs=335.3

Q ss_pred             cCchHHHHHHHHHhCCeEEEecCCeeEEEecCHHHHHHHHhcCC-CCCCCchhh-hHhh-hcC-ceeccC-CchHHHHhh
Q 039293           80 PITEPHIYSWIKLYGTNFLMWHGSQAELVVAEPKLIKEIMNNNR-SFPKREPRE-YLKL-LGN-GLVTTR-GEKWLKKRK  154 (512)
Q Consensus        80 ~~~~~~~~~~~~kyG~vf~~~~~~~~~vvv~dpe~i~~i~~~~~-~~~~~~~~~-~~~~-~g~-~l~~~~-g~~w~~~Rr  154 (512)
                      ++++..+.+|+++||+||++++|+.+.|+|+||+++++++.++. .|..++... .... .|. ++++.+ |+.|+++||
T Consensus        43 ~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~~f~~r~~~~~~~~~~~~~~~l~~~~~g~~w~~~Rr  122 (496)
T 3qz1_A           43 PNLPIHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQIPSYKLVSQRCQDISLGDYSLLWKAHKK  122 (496)
T ss_dssp             SCHHHHHHHGGGTSCSEEEECSSSSCEEEECSTTHHHHTTTTSCSTTCBCCCCTTTTTSCTTCCCSSSSCCSHHHHHHHH
T ss_pred             CcchHHHHHHHHHhCCEEEEEeCCcCEEEECCHHHHHHHHHhCcHhhCCCCCcchHHHhcCCCCceEECCCCHHHHHHHH
Confidence            34567899999999999999999999999999999999998776 675544322 2222 344 888888 999999999


Q ss_pred             hhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhcCCcccHHHHHHHHhHhHhhhcccCccccccccHHHHHHHHHHHHHH-
Q 039293          155 LAVNAFHAENLKNMIPDMIASVDMMLERWRDYEGKEIDAYREIKVLTSEIISRTAFGSCYLEGENIFNMLTKMAYIVAK-  233 (512)
Q Consensus       155 ~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~~~~vd~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~-  233 (512)
                      ++++.|+...++.+.+.++++++++++.+.+..++++|+.+++..+++|+|+.++||.  .+++........+...+.. 
T Consensus       123 ~~~~~f~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~dvi~~~~fG~--~~~~~~~~~~~~~~~~~~~~  200 (496)
T 3qz1_A          123 LTRSALLLGTRSSMEPWVDQLTQEFCERMRVQAGAPVTIQKEFSLLTCSIICYLTFGN--KEDTLVHAFHDCVQDLMKTW  200 (496)
T ss_dssp             HHHHHHHC--CCCHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHTHHHHHHTTTTSTTC--CCHHHHHHHHHHHHTTTTTT
T ss_pred             HHHHHHhhccHhhHHHHHHHHHHHHHHHHHhcCCCccCHHHHHHHHHHHHHHHHhcCC--CCChHHHHHHHHHHHHHHHh
Confidence            9999998666788999999999999999987545699999999999999999999998  2222111111111111100 


Q ss_pred             ----hhhhcccccccccccCcchhhhHHHHHHHHHHHHHHHHHHhhhhhcccccccCCcHHHHHHHhccccc--cc-cCC
Q 039293          234 ----KKYKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKVVKKRESNVLTGEAESYGNDLLGILMRAYHSAD--ET-QKI  306 (512)
Q Consensus       234 ----~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~--~~-~~l  306 (512)
                          ......+|++ ++++....++..++.+.+.+++.+.++++++.  .+  .....|+++.+++...+..  .+ ..+
T Consensus       201 ~~~~~~~~~~~P~l-~~lp~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~--~~~~~d~l~~ll~~~~~~~~~~~~~~l  275 (496)
T 3qz1_A          201 DHWSIQILDMVPFL-RFFPNPGLWRLKQAIENRDHMVEKQLRRHKES--MV--AGQWRDMTDYMLQGVGRQRVEEGPGQL  275 (496)
T ss_dssp             SSHHHHHHHHCGGG-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHS--CC--SSCCSSSHHHHTTSSTTCCC-----CC
T ss_pred             ccchhHHHHhHHHH-HhCChHHHHHHHHHHHHHHHHHHHHHHHHHhh--cc--CCCccchHHHHHHHHHhccccCCcccc
Confidence                1123356766 66775556677888888999999999888765  21  2245799999998764421  11 279


Q ss_pred             CHHHHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhCC-----CCCChhhhccchhHHHHHHhhhcc
Q 039293          307 SLDDLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARKEVLELLGQ-----QNPSADNISRLKIVGMIINETLRL  381 (512)
Q Consensus       307 ~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~-----~~~~~~~~~~l~~l~a~i~E~lRl  381 (512)
                      +++++.+++.++++||+|||+++++|++++|++||++|+|+++|+++++++     +.+ ++++++||||+|||+|+||+
T Consensus       276 ~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~-~~~~~~lpyl~a~i~E~lRl  354 (496)
T 3qz1_A          276 LEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSRVT-YKDRARLPLLNATIAEVLRL  354 (496)
T ss_dssp             CTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCSSSSSSCCS-TTGGGSCHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCcccCCCC-hhhhhcCcHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999999999984     345 89999999999999999999


Q ss_pred             CCCCcc-ccceeccccccCCeeeCCCCEEEEccchhccCCCCcCCCCCCCCCCCCCCCCCccccCCCccccccCCCcccc
Q 039293          382 YPPFVV-FVREVKKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGEDFHLYKPERFAQGVPKATSNNMAAFLPFGLGPRTC  460 (512)
Q Consensus       382 ~p~~~~-~~R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C  460 (512)
                      +|++|. ++|.+.+|++++||.|||||.|+++.+++||||++| +||++|+||||++++    .. . .++|||.|+|.|
T Consensus       355 ~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~-~dp~~F~PeR~l~~~----~~-~-~~~pFg~G~r~C  427 (496)
T 3qz1_A          355 RPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVW-EQPHEFRPDRFLEPG----AN-P-SALAFGCGARVC  427 (496)
T ss_dssp             SCSSSSCCCEECSSCEECSSSEECTTCEEEECHHHHTTCTTTS-SSTTSCCCCCCC-------CC-C-CCCSSCCSSSSC
T ss_pred             cCCcccccCccCCCCceECCEEeCCCCEEEechHHhhCChhhc-CCcccCCcccccCCC----CC-c-CccCCCCCCCCC
Confidence            999998 589999999999999999999999999999999999 999999999999753    11 2 789999999999


Q ss_pred             cchHHHHHHHHHHHHHHHhhcEEEeCCCCc-c--CCC--cceeeecCCCceEEEEeC
Q 039293          461 VGFNFTIIEAKIALSMILRRYKFTLSPNYV-H--SPV--PRITLCPQHGIQVMLRAL  512 (512)
Q Consensus       461 ~G~~la~~~~~~~la~ll~~f~~~~~~~~~-~--~~~--~~~~~~~~~~~~v~~~~r  512 (512)
                      +|++||++|++++++.|+++|++++.++.. +  ...  .+++..|. +++|++++|
T Consensus       428 ~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~R  483 (496)
T 3qz1_A          428 LGESLARLELFVVLARLLQAFTLLPPPVGALPSLQPDPYCGVNLKVQ-PFQVRLQPR  483 (496)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHCCCCCCTTCCCCCSCCSCCCSSCCCCC-CCCCCCCCC
T ss_pred             ccHHHHHHHHHHHHHHHHHhcEEeCCCCCCCCCCCcccCcceEecCC-ceEEEEEEe
Confidence            999999999999999999999999875422 1  122  24555565 899999887


No 20 
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A*
Probab=100.00  E-value=1.6e-73  Score=565.84  Aligned_cols=433  Identities=21%  Similarity=0.308  Sum_probs=324.3

Q ss_pred             HCCCCCCCCccCCCCHHHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCCeEEEecCCeeEEEecCHHHHHHHH
Q 039293           40 SQGIKGPSYKFFHGNNKEIINMKNEMIMSSSPMELSHQIFPITEPHIYSWIKLYGTNFLMWHGSQAELVVAEPKLIKEIM  119 (512)
Q Consensus        40 ~~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~vf~~~~~~~~~vvv~dpe~i~~i~  119 (512)
                      +.++|||+++|++||++.+.+                    +++.++.++++ ||+||++++|+.++++|+||+.+++++
T Consensus        22 ~eppPgP~~~P~iG~~~~~~~--------------------~p~~~~~~l~~-yGpv~~~~~g~~~~~vv~~~~~i~~il   80 (467)
T 3dbg_A           22 REPPVAGGGVPLLGHGWRLAR--------------------DPLAFMSQLRD-HGDVVRIKLGPKTVYAVTNPELTGALA   80 (467)
T ss_dssp             CBCCEECCCCSTTHHHHHHHH--------------------CHHHHHHHHGG-GCSEEEEEETTEEEEEECSHHHHHHHH
T ss_pred             CCCCCCCCCCCcccchHHhcc--------------------CHHHHHHHHHH-hCCEEEEEeCCccEEEECCHHHHHHHH
Confidence            346889999999999999864                    23567888887 999999999999999999999999999


Q ss_pred             hcCCCC-CCCchhh-hHhhhc-CceeccCCchHHHHhhhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhcCCcccHHHH
Q 039293          120 NNNRSF-PKREPRE-YLKLLG-NGLVTTRGEKWLKKRKLAVNAFHAENLKNMIPDMIASVDMMLERWRDYEGKEIDAYRE  196 (512)
Q Consensus       120 ~~~~~~-~~~~~~~-~~~~~g-~~l~~~~g~~w~~~Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~~~~vd~~~~  196 (512)
                      .++ .| .++.... ...++| .+++..+|+.|+++|+++.+.|+...++.+.+.+.++++++++.|.+  ++++|+..+
T Consensus        81 ~~~-~~~~~~~~~~~~~~~~g~~~l~~~dg~~h~~~R~~l~~~fs~~~l~~~~~~i~~~~~~l~~~l~~--~~~~d~~~~  157 (467)
T 3dbg_A           81 LNP-DYHIAGPLWESLEGLLGKEGVATANGPLHRRQRRTIQPAFRLDAIPAYGPIMEEEAHALTERWQP--GKTVDATSE  157 (467)
T ss_dssp             HCT-TC------------------------------CGGGHHHHSTTTSTTTHHHHHHHHHHHHHHSCT--TSCEEHHHH
T ss_pred             hCc-CcccccchHHHHHHhcCCCCcccCCcHHHHHHHHHhhhhhCHHHHHHHHHHHHHHHHHHHHHhcc--CCcCcHHHH
Confidence            887 56 4443333 445567 78889999999999999999999999999999999999999999864  368999999


Q ss_pred             HHHHhHhHhhhcccCccccccccHHHHHHHHHHHHHH-hhhhccccc-ccccccCcchhhhHHHHHHHHHHHHHHHHHHh
Q 039293          197 IKVLTSEIISRTAFGSCYLEGENIFNMLTKMAYIVAK-KKYKLEIPG-IGKLLKTNDDIESDKLEQDIRDSIIKVVKKRE  274 (512)
Q Consensus       197 ~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~P~-l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~  274 (512)
                      +..+++++++.++||.+.+.+  ....+......+.. ......+|+ +..+++....++..++.+.+.+++.+.+++++
T Consensus       158 ~~~~~~~vi~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~  235 (467)
T 3dbg_A          158 SFRVAVRVAARCLLRGQYMDE--RAERLCVALATVFRGMYRRMVVPLGPLYRLPLPANRRFNDALADLHLLVDEIIAERR  235 (467)
T ss_dssp             HHHHHHHHHHHHHSCSSCCHH--HHHHHHHHHHHHHHC------------------------CCHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhCCcccch--hHHHHHHHHHHHHHHHHHHhccchhhhhhCCChHhHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999987641  11122111111111 111223342 11334433345566677788888999988877


Q ss_pred             hhhhcccccccCCcHHHHHHHhccccccccCCCHHHHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHHHHHHH
Q 039293          275 SNVLTGEAESYGNDLLGILMRAYHSADETQKISLDDLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARKEVLEL  354 (512)
Q Consensus       275 ~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~  354 (512)
                      ++      .....|+++.+++...++  +..++++++.++++.+++||+|||+++++|++++|++||++|+|+++|++++
T Consensus       236 ~~------~~~~~dll~~ll~~~~~~--~~~ls~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~Ei~~~  307 (467)
T 3dbg_A          236 AS------GQKPDDLLTALLEAKDDN--GDPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAV  307 (467)
T ss_dssp             TC------CSSCCSHHHHHTTC----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred             hc------CCCchHHHHHHHhhccCC--CCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence            65      234579999999775443  3469999999999999999999999999999999999999999999999999


Q ss_pred             hCCCCCChhhhccchhHHHHHHhhhccCCCCccccceeccccccCCeeeCCCCEEEEccchhccCCCCcCCCCCCCCCCC
Q 039293          355 LGQQNPSADNISRLKIVGMIINETLRLYPPFVVFVREVKKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGEDFHLYKPER  434 (512)
Q Consensus       355 ~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~p~~F~P~R  434 (512)
                      ++++.++++++.+||||+|||+|+||++|+++.++|.+.+|++++||.||||+.|+++.+++||||++| +||++|+|||
T Consensus       308 ~~~~~~~~~~l~~l~yl~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR  386 (467)
T 3dbg_A          308 TGGRPVAFEDVRKLRHTGNVIVEAMRLRPAVWVLTRRAVAESELGGYRIPAGADIIYSPYAIQRDPKSY-DDNLEFDPDR  386 (467)
T ss_dssp             HTTSCCCHHHHTTCHHHHHHHHHHHHHSCSCCCEEEECSSCEEETTEEECTTCEEEECHHHHHTCTTTC-TTTTCCCGGG
T ss_pred             hCCCCCCHHHHhhCHHHHHHHHHHhhcCCCccccceeeCCCccCCCEEECCCCEEEEChHHhcCCchhc-CCccccCCcc
Confidence            998889999999999999999999999999998999999999999999999999999999999999999 9999999999


Q ss_pred             CCCCCCccccCCCccccccCCCcccccchHHHHHHHHHHHHHHHhhcEEEeCCCCccCCCcceeeecCCCceEEEE
Q 039293          435 FAQGVPKATSNNMAAFLPFGLGPRTCVGFNFTIIEAKIALSMILRRYKFTLSPNYVHSPVPRITLCPQHGIQVMLR  510 (512)
Q Consensus       435 fl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  510 (512)
                      |++++.. ...+. .++|||+|+|.|+|++||++|++++++.|+++|++++.++....+..+.+++|+ +++++=.
T Consensus       387 fl~~~~~-~~~~~-~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~p~-~l~~~~~  459 (467)
T 3dbg_A          387 WLPERAA-NVPKY-AMKPFSAGKRKCPSDHFSMAQLTLITAALATKYRFEQVAGSNDAVRVGITLRPH-DLLVRPV  459 (467)
T ss_dssp             GSHHHHT-TSCTT-SCCSSCSSSSSCTTHHHHHHHHHHHHHHHHHHEEEEECTTCEEEEEESSSEEEE-ECEEEEE
T ss_pred             CCCCccc-cCCCc-cccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceeEeCCCCCCccceeeEecCC-CCccchh
Confidence            9975221 22334 799999999999999999999999999999999999988765555556667776 4555433


No 21 
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein, alternative splicing, cholesterol biosynthesis, endoplasmic reticulum, heme, iron; HET: HEM KLN BCD; 2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Probab=100.00  E-value=1.1e-71  Score=552.10  Aligned_cols=432  Identities=19%  Similarity=0.303  Sum_probs=355.6

Q ss_pred             CCCCC-CCCccCCCCHHHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCCeEEEecCCeeEEEecCHHHHHHHH
Q 039293           41 QGIKG-PSYKFFHGNNKEIINMKNEMIMSSSPMELSHQIFPITEPHIYSWIKLYGTNFLMWHGSQAELVVAEPKLIKEIM  119 (512)
Q Consensus        41 ~~~Pg-p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~vf~~~~~~~~~vvv~dpe~i~~i~  119 (512)
                      +.||| |+++|++||++.+.+                    +++.++.+|+++||+||++++++.+.|+|+|++++++++
T Consensus        11 ~~PPg~P~~lP~iG~l~~~~~--------------------~~~~~~~~~~~~yG~v~~l~l~g~~~vvv~~~~~~~~il   70 (461)
T 3i3k_A           11 KSPPYIFSPIPFLGHAIAFGK--------------------SPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLF   70 (461)
T ss_dssp             CCCCBCCCSSTTTBTHHHHHH--------------------CHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHH
T ss_pred             CCCCCCCCCCCccccHHhhcc--------------------CHHHHHHHHHHHhCCEEEEEecCceEEEEeChHHHHHHH
Confidence            36899 899999999998853                    235679999999999999999999999999999999999


Q ss_pred             hcCC-CCCCCchhh--hHhhhcCceecc-CCchHHHHhhhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhcCCcccHHH
Q 039293          120 NNNR-SFPKREPRE--YLKLLGNGLVTT-RGEKWLKKRKLAVNAFHAENLKNMIPDMIASVDMMLERWRDYEGKEIDAYR  195 (512)
Q Consensus       120 ~~~~-~~~~~~~~~--~~~~~g~~l~~~-~g~~w~~~Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~~~~vd~~~  195 (512)
                      .++. .+.+...+.  ...++|.|+++. +|+.|+++|+++.+.|+...++.+.+.+.+++.++++.|.+.  +.+|+.+
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~g~~w~~~Rr~~~~~f~~~~l~~~~~~~~~~~~~ll~~l~~~--~~~dl~~  148 (461)
T 3i3k_A           71 NSKNEDLNAEDVYSRLTTPVFGKGVAYDVPNPVFLEQKKMLKSGLNIAHFKQHVSIIEKETKEYFESWGES--GEKNVFE  148 (461)
T ss_dssp             HCCTTTEESHHHHHHHHHHHHCTTSGGGSCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHGGGGCSE--EEEEHHH
T ss_pred             hccccccccchHHHHhhhhhcCCeeeeCCCcHHHHHHHHHHhhhhCHHHHHHHHHHHHHHHHHHHHHhhhc--CCcCHHH
Confidence            8776 565544332  445678888775 699999999999999999999999999999999999988643  4689999


Q ss_pred             HHHHHhHhHhhhcccCcccccc--ccHHHHHHHHHHHHHHhhhhcccccccccccCcchhhhHHHHHHHHHHHHHHHHHH
Q 039293          196 EIKVLTSEIISRTAFGSCYLEG--ENIFNMLTKMAYIVAKKKYKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKVVKKR  273 (512)
Q Consensus       196 ~~~~~~~~~i~~~~fG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~  273 (512)
                      .+..++.++++.++||.+....  +...+.+..+...+.  .....+|   .+++....++..++.+.+.+++.+.++++
T Consensus       149 ~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P---~~l~~~~~~~~~~~~~~~~~~~~~~i~~~  223 (461)
T 3i3k_A          149 ALSELIILTASHCLHGKEIRSQLNEKVAQLYADLDGGFS--HAAWLLP---GWLPLPSFRRRDRAHREIKDIFYKAIQKR  223 (461)
T ss_dssp             HHHHHHHHHHHHHHTCHHHHHTCCHHHHHHHHHHHTTSS--HHHHHSC---TTSCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHccHhhhhHHHHHHHHHHHHHHhccc--cchhhcc---cccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999876432  112222211111000  0111234   33444445666777888888999988888


Q ss_pred             hhhhhcccccccCCcHHHHHHHhccccccccCCCHHHHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHHHHHH
Q 039293          274 ESNVLTGEAESYGNDLLGILMRAYHSADETQKISLDDLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARKEVLE  353 (512)
Q Consensus       274 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~  353 (512)
                      ++.      .....|+++.+++...++  +..++++++..+++++++||+|||+++++|++++|++||++|+|+++|+++
T Consensus       224 ~~~------~~~~~d~l~~ll~~~~~~--~~~l~~~~i~~~~~~l~~ag~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~  295 (461)
T 3i3k_A          224 RQS------QEKIDDILQTLLDATYKD--GRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKT  295 (461)
T ss_dssp             TTC------CCCCCSHHHHHHTCBCTT--SCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred             Hhc------ccccccHHHHHHHhhhcc--CCCCCHHHHHHHHHHHHhhccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence            765      234679999999876543  456999999999999999999999999999999999999999999999999


Q ss_pred             HhCCC--CCChhhhccchhHHHHHHhhhccCCCCccccceeccccccCCeeeCCCCEEEEccchhccCCCCcCCCCCCCC
Q 039293          354 LLGQQ--NPSADNISRLKIVGMIINETLRLYPPFVVFVREVKKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGEDFHLYK  431 (512)
Q Consensus       354 ~~~~~--~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~p~~F~  431 (512)
                      ++++.  .++.+++.+|||++|||+|+||++|+++.++|.+.+|++++||.||||+.|+++.+++||||++| +||++|+
T Consensus       296 ~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~r~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~  374 (461)
T 3i3k_A          296 VCGENLPPLTYDQLKDLNLLDRCIKETLRLRPPIMIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSW-VERLDFN  374 (461)
T ss_dssp             HHCTTCCCCCHHHHHTCHHHHHHHHHHHHHSCSCCCEEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTC-TTTTCCC
T ss_pred             HhcCCCCCCCHHHHhcChHHHHHHHHHHhcCCCccccccccCCCccCCCEEECCCCEEEEChHHhcCCcccC-CCcccCC
Confidence            99854  46899999999999999999999999988899999999999999999999999999999999999 9999999


Q ss_pred             CCCCCCCCCccccCCCccccccCCCcccccchHHHHHHHHHHHHHHHhhcEEEeCCCCccCC-CcceeeecCCCceEEEE
Q 039293          432 PERFAQGVPKATSNNMAAFLPFGLGPRTCVGFNFTIIEAKIALSMILRRYKFTLSPNYVHSP-VPRITLCPQHGIQVMLR  510 (512)
Q Consensus       432 P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~  510 (512)
                      ||||++.++. ...+. .++|||+|+|.|||++||.+|++++++.||++|++++.++..+.. ...++..|.+++.++=+
T Consensus       375 P~Rfl~~~~~-~~~~~-~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  452 (461)
T 3i3k_A          375 PDRYLQDNPA-SGEKF-AYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYFPTVNYTTMIHTPENPVIRYKR  452 (461)
T ss_dssp             GGGGGSCCHH-HHSSS-SSCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEECSTTCCCCBCCSSSSCCBSSCEEEEEE
T ss_pred             CCCCCCCCCC-CCCCc-ceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeEEeCCCCCCCcccceeecCCCCceEEeec
Confidence            9999976432 22344 799999999999999999999999999999999999987754433 23456678888777643


No 22 
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A*
Probab=100.00  E-value=9.1e-71  Score=544.97  Aligned_cols=413  Identities=22%  Similarity=0.384  Sum_probs=338.3

Q ss_pred             chHHHHHHHHHhCCeEEEecCCeeEEEecCHHHHHHHHhcCCCCCCCch-hh-hH-----hhhcCceecc-CCchHHHHh
Q 039293           82 TEPHIYSWIKLYGTNFLMWHGSQAELVVAEPKLIKEIMNNNRSFPKREP-RE-YL-----KLLGNGLVTT-RGEKWLKKR  153 (512)
Q Consensus        82 ~~~~~~~~~~kyG~vf~~~~~~~~~vvv~dpe~i~~i~~~~~~~~~~~~-~~-~~-----~~~g~~l~~~-~g~~w~~~R  153 (512)
                      ++..+.+|+++||+||++++|+.+.|+|+||+++++++.++ .+.+... +. ..     .++|.++++. +|+.|+++|
T Consensus        12 ~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~il~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~R   90 (456)
T 3mdm_A           12 LQDVFLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMST-KYNKDSKMYRALQTVFGERLFGQGLVSECNYERWHKQR   90 (456)
T ss_dssp             HHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTCT-TSCCCHHHHHHHHEETTEESSTTSTTTCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCeEEEEeCCCCEEEECCHHHHHHHHhhc-cccccchhHHHHHHhhcccccCCCcccCCChHHHHHHH
Confidence            46678999999999999999999999999999999999753 4544432 11 21     1345677664 799999999


Q ss_pred             hhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhcC--CcccHHHHHHHHhHhHhhhcccCcccccc----ccHHHHHHHH
Q 039293          154 KLAVNAFHAENLKNMIPDMIASVDMMLERWRDYEG--KEIDAYREIKVLTSEIISRTAFGSCYLEG----ENIFNMLTKM  227 (512)
Q Consensus       154 r~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~~--~~vd~~~~~~~~~~~~i~~~~fG~~~~~~----~~~~~~~~~~  227 (512)
                      |++++.|+.++++.+.+.+.++++++++.+.+..+  +++|+.+++..+++|+++.++||.+++..    +.+...+..+
T Consensus        91 r~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~  170 (456)
T 3mdm_A           91 RVIDLAFSRSSLVSLMETFNEKAEQLVEILEAKADGQTPVSMQDMLTYTAMDILAKAAFGMETSMLLGAQKPLSQAVKLM  170 (456)
T ss_dssp             HHHGGGGSHHHHHTTHHHHHHHHHHHHHHHHHTCSSSSCEEHHHHHHHHHHHHHHHHHHSCCCCGGGTCCHHHHHHHHHH
T ss_pred             hhcccccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeeHHHHHHHHHHHHHHHHHcCCChhhhcccccHHHHHHHHH
Confidence            99999999999999999999999999999987543  38999999999999999999999987632    1223333333


Q ss_pred             HHHHHHhhhhcccccccccccCc--chhhhHHHHHHHHHHHHHHHHHHhhhhhcccccccCCcHHHHHHHhccccccccC
Q 039293          228 AYIVAKKKYKLEIPGIGKLLKTN--DDIESDKLEQDIRDSIIKVVKKRESNVLTGEAESYGNDLLGILMRAYHSADETQK  305 (512)
Q Consensus       228 ~~~~~~~~~~~~~P~l~~~~~~~--~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~  305 (512)
                      ...+...    ..|.+ .++|..  ..+...++.+.+.+++.+.++++++.  .+.+.....|+++.++++..     ..
T Consensus       171 ~~~~~~~----~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~--~~~~~~~~~d~l~~ll~~~~-----~~  238 (456)
T 3mdm_A          171 LEGITAS----RNTLA-KFLPGKRKQLREVRESIRFLRQVGRDWVQRRREA--LKRGEEVPADILTQILKAEE-----GA  238 (456)
T ss_dssp             HHHHHHH----HHSCG-GGCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHTTCCCCCCHHHHHHHHTS-----SC
T ss_pred             HHHHHHH----HHHHH-HhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hhccccchhhHHHHHHHhcC-----CC
Confidence            2222211    12222 333322  12334455667777778888777765  22223345799999998742     35


Q ss_pred             CCHHHHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhC-CCCCChhhhccchhHHHHHHhhhccCCC
Q 039293          306 ISLDDLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARKEVLELLG-QQNPSADNISRLKIVGMIINETLRLYPP  384 (512)
Q Consensus       306 l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~-~~~~~~~~~~~l~~l~a~i~E~lRl~p~  384 (512)
                      ++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++++ ++.++++++.+||||+|||+|+||++|+
T Consensus       239 ~~~~~l~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~  318 (456)
T 3mdm_A          239 QDDEGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLGRLQYLSQVLKESLRLYPP  318 (456)
T ss_dssp             SSSHHHHHHHHHHHHHTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCSSCCHHHHHHCHHHHHHHHHHHHHCCS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHcCCCCCCCHHHHhcCHHHHHHHHHHHHhCCC
Confidence            788999999999999999999999999999999999999999999999998 4678999999999999999999999999


Q ss_pred             CccccceeccccccCCeeeCCCCEEEEccchhccCCCCcCCCCCCCCCCCCCCCCCccccCCCccccccCCCcccccchH
Q 039293          385 FVVFVREVKKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGEDFHLYKPERFAQGVPKATSNNMAAFLPFGLGPRTCVGFN  464 (512)
Q Consensus       385 ~~~~~R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~  464 (512)
                      +++++|.+.+|++++||.|||||.|+++.+++||||++| +||++|+||||+++..   ..+. .++|||.|+|.|+|++
T Consensus       319 ~~~~~r~~~~d~~i~g~~Ip~Gt~v~~~~~~~~~d~~~~-~dp~~F~PeRfl~~~~---~~~~-~~~pFg~G~r~C~G~~  393 (456)
T 3mdm_A          319 AWGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYF-EDPLTFNPDRFGPGAP---KPRF-TYFPFSLGHRSCIGQQ  393 (456)
T ss_dssp             SCCEEEEECSCEEETTEEECSSEEEEECHHHHHTCTTTS-SSTTSCCGGGGSTTSC---CCSS-SCCTTCCGGGSCTTHH
T ss_pred             ccccccccCCceeECCEEECCCCEEEeehHHhcCCchhc-CCccccCccccCCCCC---CCCC-cccCCCCCCcCCCCHH
Confidence            998899999999999999999999999999999999999 9999999999997631   2233 7999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhcEEEeCCCCccCCCcceeeecCCCceEEEEeC
Q 039293          465 FTIIEAKIALSMILRRYKFTLSPNYVHSPVPRITLCPQHGIQVMLRAL  512 (512)
Q Consensus       465 la~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  512 (512)
                      ||++|++++++.|+++|++++.++........++..|.++++|++++|
T Consensus       394 lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~r  441 (456)
T 3mdm_A          394 FAQMEVKVVMAKLLQRLEFRLVPGQRFGLQEQATLKPLDPVLCTLRPR  441 (456)
T ss_dssp             HHHHHHHHHHHHHHHHEEEEECTTCCCCEEESSSEEESSCCEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHhCeEEeCCCCcceeecceEEecCCCeEEEEEEc
Confidence            999999999999999999999877554444456778999999999987


No 23 
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=100.00  E-value=1e-68  Score=535.62  Aligned_cols=433  Identities=15%  Similarity=0.165  Sum_probs=329.2

Q ss_pred             CCCCCCC-ccCCCCHHHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCCeEEEecCCeeEEEecCHHHHHHHHh
Q 039293           42 GIKGPSY-KFFHGNNKEIINMKNEMIMSSSPMELSHQIFPITEPHIYSWIKLYGTNFLMWHGSQAELVVAEPKLIKEIMN  120 (512)
Q Consensus        42 ~~Pgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~vf~~~~~~~~~vvv~dpe~i~~i~~  120 (512)
                      .+|||++ +|++||++.+..                    +++.++.+|+++||+||++++|+.++|+|+||+++++++.
T Consensus        14 ~pPgp~~~~P~iG~~~~~~~--------------------~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~~~~il~   73 (491)
T 3dax_A           14 EPPLENGLIPYLGCALQFGA--------------------NPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLC   73 (491)
T ss_dssp             CCCEEEEEESCTTTTGGGTC--------------------CHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGTHHHHS
T ss_pred             CCCcCCCcccchhhHHHHhh--------------------CHHHHHHHHHHhcCCeEEEEECCeEEEEEcChHHHHHHHc
Confidence            6789988 899999887631                    3356899999999999999999999999999999999997


Q ss_pred             cCCCCCCCch-h-hhHhhhcCcee-ccCCchHHHHhhhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhc---C--Cccc
Q 039293          121 NNRSFPKREP-R-EYLKLLGNGLV-TTRGEKWLKKRKLAVNAFHAENLKNMIPDMIASVDMMLERWRDYE---G--KEID  192 (512)
Q Consensus       121 ~~~~~~~~~~-~-~~~~~~g~~l~-~~~g~~w~~~Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~---~--~~vd  192 (512)
                      +...+..... . .....+|.+++ ..+|+.|+++|+.+.+.|+..++..+.+.+.+.+.+++.......   .  ..++
T Consensus        74 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~r~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  153 (491)
T 3dax_A           74 HGKYFDWKKFHFATSAKAFGHRSIDPMDGNTTENINDTFIKTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEG  153 (491)
T ss_dssp             CCTTEESSHHHHHHHHHHHTCCCCCGGGTSBCCCHHHHHHHHHSHHHHHHHHHHHHHHHHHHHC----------CCEEEE
T ss_pred             CCccCChHHHHHHHHHHHcCCCcccccchhHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhhccCCcCCCCceecc
Confidence            6653322222 1 24456687776 677899999999999999999999998888888888776654321   1  2678


Q ss_pred             HHHHHHHHhHhHhhhcccCccccccccHHHHHHHHHHHHHHhhhhcccccccccccCcchhhhHHHHHHHHHHHHHHHHH
Q 039293          193 AYREIKVLTSEIISRTAFGSCYLEGENIFNMLTKMAYIVAKKKYKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKVVKK  272 (512)
Q Consensus       193 ~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~  272 (512)
                      +...+..+++++++.++||.+...++........+...+..  ....+|++.+.++....+...++.+.+.+.+.   ++
T Consensus       154 l~~~~~~~i~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~l~~~lp~~~~~~~~~~~~~~~~~~~---~~  228 (491)
T 3dax_A          154 MYSFCYRVMFEAGYLTIFGRDLTRRDTQKAHILNNLDNFKQ--FDKVFPALVAGLPIHMFRTAHNAREKLAESLR---HE  228 (491)
T ss_dssp             HHHHHHHHHHHHHHHHHHCBCSTTGGGHHHHHHHHHHHHHH--HHHHHHHHHTTCCGGGSHHHHHHHHHHHHHTS---HH
T ss_pred             HHHHHHHHHHHHhHHHHcCcccccccchhhhhhHHHHHHHH--HHHHhHHHHHhCCHhhhhHHHHHHHHHHHHHH---HH
Confidence            99999999999999999998776443322223222222211  12234544344443333333444333333221   22


Q ss_pred             HhhhhhcccccccCCcHHHHHHHhccccccccCCCHHHHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHHHHH
Q 039293          273 RESNVLTGEAESYGNDLLGILMRAYHSADETQKISLDDLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARKEVL  352 (512)
Q Consensus       273 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~  352 (512)
                      +.+.      .....|+++.+++...+.   ..++++++.++++.+++||++||+++++|++++|++||++|+|+++||+
T Consensus       229 ~~~~------~~~~~d~l~~ll~~~~~~---~~~~~~~i~~~~~~~~~ag~~tta~tl~~~l~~L~~~P~~~~kl~~Ei~  299 (491)
T 3dax_A          229 NLQK------RESISELISLRMFLNDTL---STFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVK  299 (491)
T ss_dssp             HHTT------CBSCCHHHHHHHHHHHHH---BCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred             Hhhc------ccchhHHHHHHHHHHHhc---CCChHHHHHHHHHHHHHHhccchHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence            2222      123578999988764332   3578999999999999999999999999999999999999999999999


Q ss_pred             HHhCCC-----------CCChhhhccchhHHHHHHhhhccCCCCccccceecccccc----CCeeeCCCCEEEEccchhc
Q 039293          353 ELLGQQ-----------NPSADNISRLKIVGMIINETLRLYPPFVVFVREVKKEVKL----GDLIVPANVDVTIPVIAVH  417 (512)
Q Consensus       353 ~~~~~~-----------~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~~----~g~~IpkG~~v~~~~~~~~  417 (512)
                      +++++.           .++++++.+||||+|||+||||++|+ +.++|.+.+|+++    +||.|||||.|+++.+++|
T Consensus       300 ~v~~~~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~-~~~~R~~~~d~~l~~~~~g~~ip~Gt~v~~~~~~~~  378 (491)
T 3dax_A          300 RTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSSA-SLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMH  378 (491)
T ss_dssp             HHHHTTTCCCCSSSCCCCCCHHHHHCCHHHHHHHHHHHHHHEE-ECEEEEESSSEEEEETTEEEEECTTCEEEECTHHHH
T ss_pred             HHhhccccccccCCCccccCHHHHhcCHHHHHHHHHHHhcCCC-ccceeEecCCeEeecCCCcEEeCCCCEEEechHhhc
Confidence            998742           35899999999999999999999974 6779999999999    6899999999999999999


Q ss_pred             cCCCCcCCCCCCCCCCCCCCCCCccc--------cCCCccccccCCCcccccchHHHHHHHHHHHHHHHhhcEEEeCCCC
Q 039293          418 HDPQIWGEDFHLYKPERFAQGVPKAT--------SNNMAAFLPFGLGPRTCVGFNFTIIEAKIALSMILRRYKFTLSPNY  489 (512)
Q Consensus       418 ~d~~~~~~~p~~F~P~Rfl~~~~~~~--------~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~la~ll~~f~~~~~~~~  489 (512)
                      |||++| +||++|+||||+++++...        ..+. .++|||+|+|.|||++||++|+++++|.||++|++++.++.
T Consensus       379 ~d~~~~-~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~~-~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~  456 (491)
T 3dax_A          379 LDPEIY-PDPLTFKYDRYLDENGKTKTTFYCNGLKLKY-YYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQ  456 (491)
T ss_dssp             TCTTTS-SSTTSCCTTTTBCTTSSBCCCCEETTEECSC-SCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEEETTTT
T ss_pred             CCcccC-CCHHHcCCccccCCCccccccccccCcCCcc-ccccCCCCCCCCCcHHHHHHHHHHHHHHHHHHeeEEEccCC
Confidence            999999 9999999999997533211        1234 79999999999999999999999999999999999997653


Q ss_pred             ccCC--C---cc-eeeecCCCceEEEEe
Q 039293          490 VHSP--V---PR-ITLCPQHGIQVMLRA  511 (512)
Q Consensus       490 ~~~~--~---~~-~~~~~~~~~~v~~~~  511 (512)
                      ...+  .   .+ ++..|..+++|++|.
T Consensus       457 ~~~~~~~~~~~~~~~~~p~~~~~~~~r~  484 (491)
T 3dax_A          457 AKCPPLDQSRAGLGILPPLNDIEFKYKF  484 (491)
T ss_dssp             CCCCCBCGGGTBEEECCBSSCCEEEEEE
T ss_pred             CCCCCCCcccccccccCCCCCceEEEEe
Confidence            2111  1   13 356788999999885


No 24 
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=100.00  E-value=2.5e-66  Score=518.91  Aligned_cols=430  Identities=13%  Similarity=0.101  Sum_probs=319.6

Q ss_pred             CCCCCCC-ccCCCCHHHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCCeEEEecCCeeEEEecCHHHHHHHHh
Q 039293           42 GIKGPSY-KFFHGNNKEIINMKNEMIMSSSPMELSHQIFPITEPHIYSWIKLYGTNFLMWHGSQAELVVAEPKLIKEIMN  120 (512)
Q Consensus        42 ~~Pgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~vf~~~~~~~~~vvv~dpe~i~~i~~  120 (512)
                      .+|||++ +|++||++.+..                    +.+.++.+|+++||+||++++|+.++|+++||+++++++.
T Consensus        19 ~PPgp~~~~P~iG~~~~~~~--------------------~~~~~~~~l~~kYG~i~~v~lg~~~~vvv~~p~~~~~il~   78 (498)
T 3b6h_A           19 EPPLDLGSIPWLGYALDFGK--------------------DAASFLTRMKEKHGDIFTILVGGRYVTVLLDPHSYDAVVW   78 (498)
T ss_dssp             CCCEECCSSTTTBTHHHHHH--------------------CHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHT
T ss_pred             CCCCCCCCCcchhhHHHhcc--------------------CHHHHHHHHHHHcCCeEEEEECCeeEEEEcCHHHHHHHHh
Confidence            6899998 899999998853                    2356799999999999999999999999999999999998


Q ss_pred             cCCC-CCCCch--hhhHhhhcCceeccCCchHHHHhhhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhcC-C--cccHH
Q 039293          121 NNRS-FPKREP--REYLKLLGNGLVTTRGEKWLKKRKLAVNAFHAENLKNMIPDMIASVDMMLERWRDYEG-K--EIDAY  194 (512)
Q Consensus       121 ~~~~-~~~~~~--~~~~~~~g~~l~~~~g~~w~~~Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~~-~--~vd~~  194 (512)
                      ++.. +.....  ......+|.+++..+++.|+   ++..+.|+...++.+.+.+.+.+.+.+........ .  .+++.
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~r---r~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~  155 (498)
T 3b6h_A           79 EPRTRLDFHAYAIFLMERIFDVQLPHYSPSDEK---ARMKLTLLHRELQALTEAMYTNLHAVLLGDATEAGSGWHEMGLL  155 (498)
T ss_dssp             CCTTTEECCHHHHHHHHHTSCCCCTTCCHHHHH---HHHHTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCEEEEHH
T ss_pred             CccccCCchhhHHHHHHHHcCCCccccCHHHHH---HHHHHhhchHhHHHHHHHHHHHHHHHHhhcccccCCCcceecHH
Confidence            7652 433322  22445677777777777764   45556888888888888888888777776543211 2  57899


Q ss_pred             HHHHHHhHhHhhhcccCcccccccc-----HHHHHHHHHHHHHHhhhhcccccccccc-cCcchhhhHHHHHHHHHHHHH
Q 039293          195 REIKVLTSEIISRTAFGSCYLEGEN-----IFNMLTKMAYIVAKKKYKLEIPGIGKLL-KTNDDIESDKLEQDIRDSIIK  268 (512)
Q Consensus       195 ~~~~~~~~~~i~~~~fG~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~P~l~~~~-~~~~~~~~~~~~~~~~~~l~~  268 (512)
                      ..+..+++++++.++||.+.+.++.     .......+...+..  ....+|++.+.+ +....+...++.+.+.+.+  
T Consensus       156 ~~~~~vi~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~--  231 (498)
T 3b6h_A          156 DFSYSFLLRAGYLTLYGIEALPRTHESQAQDRVHSADVFHTFRQ--LDRLLPKLARGSLSVGDKDHMCSVKSRLWKLL--  231 (498)
T ss_dssp             HHHHHHHHHHHHHHHHCBSCSSCCHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHT--
T ss_pred             HHHHHHHHHHHHHhhcCcccccccccchhhHHHhhHHHHHHHHH--HHhhHHHHHHHhcCchhhHHHHHHHHHHHHHH--
Confidence            9999999999999999987653321     11222222222111  122345332211 1111112222222222221  


Q ss_pred             HHHHHhhhhhcccccccCCcHHHHHHHhccccccccCCCHHHHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHH
Q 039293          269 VVKKRESNVLTGEAESYGNDLLGILMRAYHSADETQKISLDDLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKAR  348 (512)
Q Consensus       269 ~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~  348 (512)
                       .+++...      .....|+++.+++...+.   ..++++++. +++.+++||++||+++++|++++|++||++|+|++
T Consensus       232 -~~~~~~~------~~~~~d~l~~ll~~~~~~---~~~~~~~~~-~~~~~l~ag~~tt~~~l~~~l~~L~~~P~~~~kl~  300 (498)
T 3b6h_A          232 -SPARLAR------RAHRSKWLESYLLHLEEM---GVSEEMQAR-ALVLQLWATQGNMGPAAFWLLLFLLKNPEALAAVR  300 (498)
T ss_dssp             -CHHHHTT------CBSCCHHHHHHHHHHHHT---TCCHHHHHH-HHHHHHHHHHTTHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred             -HHHHHhc------cccHHHHHHHHHHHHHhC---CCCHHHHHH-HHHHHHHHhhhchHHHHHHHHHHHHcCHHHHHHHH
Confidence             1222221      124569999998765432   246777777 88889999999999999999999999999999999


Q ss_pred             HHHHHHhCCC--------CCChhhhccchhHHHHHHhhhccCCCCccccceecccccc-----CCeeeCCCCEEEEccch
Q 039293          349 KEVLELLGQQ--------NPSADNISRLKIVGMIINETLRLYPPFVVFVREVKKEVKL-----GDLIVPANVDVTIPVIA  415 (512)
Q Consensus       349 ~Ei~~~~~~~--------~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~~-----~g~~IpkG~~v~~~~~~  415 (512)
                      +|+++++++.        .++.+++.+||||+|||+|+||++|+ +.++|.+.+|+++     +||.|||||.|+++.++
T Consensus       301 ~Ei~~v~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~-~~~~R~~~~d~~~~~~~g~g~~ip~Gt~v~~~~~~  379 (498)
T 3b6h_A          301 GELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRLTAA-PFITREVVVDLAMPMADGREFNLRRGDRLLLFPFL  379 (498)
T ss_dssp             HHHHHHHHC----------CCTHHHHSCHHHHHHHHHHHHHHBC-BCEEEEECSCEEEECTTSCEEEECTTCEEEECTCC
T ss_pred             HHHHHHhcccCCCCCcccccCHHHHhcCHHHHHHHHHHHhccCC-CcceeeecCCeeeecCCCCeEEeCCCCEEEeCchH
Confidence            9999999843        25899999999999999999999975 6779999999988     68999999999999999


Q ss_pred             -hccCCCCcCCCCCCCCCCCCCCCCCccc--------cCCCccccccCCCcccccchHHHHHHHHHHHHHHHhhcEEEeC
Q 039293          416 -VHHDPQIWGEDFHLYKPERFAQGVPKAT--------SNNMAAFLPFGLGPRTCVGFNFTIIEAKIALSMILRRYKFTLS  486 (512)
Q Consensus       416 -~~~d~~~~~~~p~~F~P~Rfl~~~~~~~--------~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~la~ll~~f~~~~~  486 (512)
                       +||||++| +||++|+||||++.++...        ..+. .++|||+|+|.|||++||++|+++++|.||++|++++.
T Consensus       380 ~~~~d~~~~-~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~~-~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~  457 (498)
T 3b6h_A          380 SPQRDPEIY-TDPEVFKYNRFLNPDGSEKKDFYKDGKRLKN-YNMPWGAGHNHCLGRSYAVNSIKQFVFLVLVHLDLELI  457 (498)
T ss_dssp             CCCTCTTTS-SSTTSCCTTTTBCTTSSBCCCCEETTEECSC-SCCTTEETTEECSSHHHHHHHHHHHHHHHHHTEEEEES
T ss_pred             hhcCCcccc-CChhhcCcccccCCCcccccccccccccCCc-ceeccCCCCCCCCcHHHHHHHHHHHHHHHHHHceeEeC
Confidence             99999999 9999999999997543211        1234 79999999999999999999999999999999999997


Q ss_pred             CCCccCC------CcceeeecCCCceEEEEeC
Q 039293          487 PNYVHSP------VPRITLCPQHGIQVMLRAL  512 (512)
Q Consensus       487 ~~~~~~~------~~~~~~~~~~~~~v~~~~r  512 (512)
                      ++....+      ....+..|..+++|++++|
T Consensus       458 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  489 (498)
T 3b6h_A          458 NADVEIPEFDLSRYGFGLMQPEHDVPVRYRIR  489 (498)
T ss_dssp             STTCCCCCBCGGGTBSSBCCBSSCCEEEEEEC
T ss_pred             CCCCCCCCCCccccccccCCCCCCccEEEEec
Confidence            6532111      1233467888999999987


No 25 
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A*
Probab=100.00  E-value=2e-67  Score=525.59  Aligned_cols=432  Identities=15%  Similarity=0.159  Sum_probs=342.5

Q ss_pred             CCCCCCC-ccCCCCHHHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCCeEEEecCCeeEEEecCHHHHHHHHh
Q 039293           42 GIKGPSY-KFFHGNNKEIINMKNEMIMSSSPMELSHQIFPITEPHIYSWIKLYGTNFLMWHGSQAELVVAEPKLIKEIMN  120 (512)
Q Consensus        42 ~~Pgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~vf~~~~~~~~~vvv~dpe~i~~i~~  120 (512)
                      .||||++ +|++||++.+.                    .+++.++.+++++||+||++++|+.++++|+||+++++++.
T Consensus        14 ~PPgp~~~lPliG~~~~~~--------------------~~p~~~~~~l~~~yGpv~~~~lg~~~~vvv~~p~~v~~vl~   73 (491)
T 3v8d_A           14 EPPLENGLIPYLGCALQFG--------------------ANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLC   73 (491)
T ss_dssp             SCCEEEEEESSTTTTGGGT--------------------CCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHS
T ss_pred             CCCCCCCCcceeccHHHHh--------------------cCHHHHHHHHHHHcCCceEEEECCEEEEEEcCHHHHHHHHh
Confidence            7899999 69999998773                    24577899999999999999999999999999999999997


Q ss_pred             cCCCCCCCch--hhhHhhhcCcee-ccCCchHHHHhhhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhc-----CCccc
Q 039293          121 NNRSFPKREP--REYLKLLGNGLV-TTRGEKWLKKRKLAVNAFHAENLKNMIPDMIASVDMMLERWRDYE-----GKEID  192 (512)
Q Consensus       121 ~~~~~~~~~~--~~~~~~~g~~l~-~~~g~~w~~~Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~-----~~~vd  192 (512)
                      +++.+.....  .....++|.+.+ ..+|+.|+++|+.+.+.|+...++.+.+.+.+++.++++.+....     ...++
T Consensus        74 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~Rr~~~~~f~~~~l~~~~~~i~~~~~~ll~~~~~~~~~~~~~~~~~  153 (491)
T 3v8d_A           74 HGKYFDWKKFHFALSAKAFGHRSIDPMDGNTTENINDTFIKTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEG  153 (491)
T ss_dssp             CCTTEESSHHHHHHHHHHHTCCCCCGGGSSBCCCHHHHHHHHHSHHHHHHHHHHHHHHHHHHHSCCSSCGGGGCSCEEEE
T ss_pred             cCCccchHHHHHHHHHHhcCCcccccccchhHHHHHHHHHHHcCccchHHHHHHHHHHHHHHHHhhhhcccCCCCCcccC
Confidence            7653433332  225567776554 457999999999999999999999999999999999988542211     13789


Q ss_pred             HHHHHHHHhHhHhhhcccCccccccccHHHHHHHHHHHHHHhhhhcccccccccccCcchhhhHHHHHHHHHHHHHHHHH
Q 039293          193 AYREIKVLTSEIISRTAFGSCYLEGENIFNMLTKMAYIVAKKKYKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKVVKK  272 (512)
Q Consensus       193 ~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~  272 (512)
                      +.+++..+++++++..+||.+....+............+.  .+...+|.+...++....++..++.+++.+.+.+.+.+
T Consensus       154 l~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~p~~~~~~~~~a~~~l~~~~~~~~~~  231 (491)
T 3v8d_A          154 MYSFCYRVMFEAGYLTIFGRDLTRRDTQKAHILNNLDNFK--QFDKVFPALVAGLPIHMFRTAHNAREKLAESLRHENLQ  231 (491)
T ss_dssp             HHHHHHHHHHHHHHHHHHCBCCSCGGGHHHHHHHHHHHHH--HHHHHHHHHHTTCCGGGCHHHHHHHHHHHHHTSHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHcCccccccchhhhhhHHHHHHHH--HHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999987643332222222222111  12223444433455555566677777776666655543


Q ss_pred             HhhhhhcccccccCCcHHHHHHHhccccccccCCCHHHHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHHHHH
Q 039293          273 RESNVLTGEAESYGNDLLGILMRAYHSADETQKISLDDLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARKEVL  352 (512)
Q Consensus       273 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~  352 (512)
                      ++.         ...|+++.++....+   ...++++++..+++.+++||++||+++++|++++|++||++|+++++||+
T Consensus       232 ~~~---------~~~d~l~~l~~~~~~---~~~~~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~  299 (491)
T 3v8d_A          232 KRE---------SISELISLRMFLNDT---LSTFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVK  299 (491)
T ss_dssp             TCB---------SCCHHHHHHHHHHHH---HBCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred             ccc---------cccHHHHHHHHHhhc---cCCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Confidence            332         347899998876543   24689999999999999999999999999999999999999999999999


Q ss_pred             HHhCC-----------CCCChhhhccchhHHHHHHhhhccCCCCccccceecccccc----CCeeeCCCCEEEEccchhc
Q 039293          353 ELLGQ-----------QNPSADNISRLKIVGMIINETLRLYPPFVVFVREVKKEVKL----GDLIVPANVDVTIPVIAVH  417 (512)
Q Consensus       353 ~~~~~-----------~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~~----~g~~IpkG~~v~~~~~~~~  417 (512)
                      +++++           ..++.+++.+||||+|||+|+||++| .+.++|.+.+|+++    +||.||||+.|.++.+++|
T Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~a~i~E~lRl~p-~~~~~R~~~~d~~~~~~~~g~~ip~G~~v~~~~~~~~  378 (491)
T 3v8d_A          300 RTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSS-ASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMH  378 (491)
T ss_dssp             HHHHHTTCCCCSSSSCCCCCHHHHHCCHHHHHHHHHHHHHHE-EECEEEEESSSEEEECSSCEEEECTTCEEEECTHHHH
T ss_pred             HHhhccccccccccccccCCHHHHhcChHHHHHHHHHhhcCC-CCccceeccCCeeEeecCCcEEeCCCCEEEecchhhc
Confidence            99873           35789999999999999999999997 55668999999999    9999999999999999999


Q ss_pred             cCCCCcCCCCCCCCCCCCCCCCCccc--------cCCCccccccCCCcccccchHHHHHHHHHHHHHHHhhcEEEeCCCC
Q 039293          418 HDPQIWGEDFHLYKPERFAQGVPKAT--------SNNMAAFLPFGLGPRTCVGFNFTIIEAKIALSMILRRYKFTLSPNY  489 (512)
Q Consensus       418 ~d~~~~~~~p~~F~P~Rfl~~~~~~~--------~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~la~ll~~f~~~~~~~~  489 (512)
                      |||++| +||++|+||||++.++...        ..+. .++|||+|+|.|||++||.+|++++++.|+++|++++.++.
T Consensus       379 ~d~~~~-~~p~~F~p~R~~~~~~~~~~~~~~~~~~~~~-~~~~FG~G~~~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~  456 (491)
T 3v8d_A          379 LDPEIY-PDPLTFKYDRYLDENGKTKTTFYCNGLKLKY-YYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQ  456 (491)
T ss_dssp             TCTTTS-SSTTSCCTTTTBCTTSSBCCCCEETTEECSC-CCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEEEC---
T ss_pred             CCcccC-CCccccCcccccCCCCCcccccccccccCCC-cccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceEEeCCCC
Confidence            999999 9999999999997643321        1234 78999999999999999999999999999999999998663


Q ss_pred             ccCC------CcceeeecCCCceEEEE
Q 039293          490 VHSP------VPRITLCPQHGIQVMLR  510 (512)
Q Consensus       490 ~~~~------~~~~~~~~~~~~~v~~~  510 (512)
                      ...+      ...+...|..++.|+++
T Consensus       457 ~~~~~~~~~~~~~~~~~p~~~i~v~~~  483 (491)
T 3v8d_A          457 AKCPPLDQSRAGLGILPPLNDIEFKYK  483 (491)
T ss_dssp             CCCCCBCGGGTBEEECCBSSCCEEEEE
T ss_pred             CCCCCCCcccCcCcccCCCCCeEEEEE
Confidence            2221      12356778999999875


No 26 
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A*
Probab=100.00  E-value=2.7e-66  Score=515.85  Aligned_cols=424  Identities=14%  Similarity=0.154  Sum_probs=309.4

Q ss_pred             CCCCCCC-ccCCCCHHHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCCeEEEecCCeeEEEecCHHHHHHHHh
Q 039293           42 GIKGPSY-KFFHGNNKEIINMKNEMIMSSSPMELSHQIFPITEPHIYSWIKLYGTNFLMWHGSQAELVVAEPKLIKEIMN  120 (512)
Q Consensus        42 ~~Pgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~vf~~~~~~~~~vvv~dpe~i~~i~~  120 (512)
                      .+|||++ +|++||++.+..                    +++.++.+|+++||+||++++|+.++++++||+++++++.
T Consensus        19 ~pPgp~~~~P~iG~~~~~~~--------------------~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~   78 (475)
T 3b98_A           19 EPPLDKGMIPWLGHALEFGK--------------------DAAKFLTRMKEKHGDIFTVRAAGLYITVLLDSNCYDAVLS   78 (475)
T ss_dssp             CCCEECCSSTTTBTHHHHHH--------------------CHHHHHHHHHHHHCSEEEEEETTEEEEEECCTTTHHHHHT
T ss_pred             CCCCCCCCcchHHhHHHHhh--------------------CHHHHHHHHHHHhCCeEEEEECCceEEEEeCHHHHHHHHc
Confidence            7899998 899999998853                    2356899999999999999999999999999999999998


Q ss_pred             cCCCCCCCch-hh-hHhhhcCceeccCCchHHHHhhhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhc-C-C--cccHH
Q 039293          121 NNRSFPKREP-RE-YLKLLGNGLVTTRGEKWLKKRKLAVNAFHAENLKNMIPDMIASVDMMLERWRDYE-G-K--EIDAY  194 (512)
Q Consensus       121 ~~~~~~~~~~-~~-~~~~~g~~l~~~~g~~w~~~Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~-~-~--~vd~~  194 (512)
                      ++..+..... .. ...++|.+++..+++.|   |+++.+.|+...++.+.+.+.+++.++++.+.... . .  .+++.
T Consensus        79 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  155 (475)
T 3b98_A           79 DVASLDQTSYAQVLMKRIFNMILPSHNPESE---KKRAEMHFQGASLTQLSNSMQNNLRLLMTPSEMGLKTSEWKKDGLF  155 (475)
T ss_dssp             CTTTEESHHHHHHHHHHTTCCCCTTCCHHHH---HHHHHHHTSHHHHHHHHHHHHHHHHHHSSTTTTTCSSCSCEEEEHH
T ss_pred             CcccCCchHHHHHHHHHHhCCCCCCCChHHH---HHHHHHHcChhhHHHHHHHHHHHHHHHHhhcccccCCCCceeehHH
Confidence            7653432221 12 44556777777777665   56777789999999999999999999888765432 1 1  57888


Q ss_pred             HHHHHHhHhHhhhcccCccccccccHHHHHHHHHHHHHHhhhhcccccccc-cccCcchhhhHHHHHHHHHHHHHHHHHH
Q 039293          195 REIKVLTSEIISRTAFGSCYLEGENIFNMLTKMAYIVAKKKYKLEIPGIGK-LLKTNDDIESDKLEQDIRDSIIKVVKKR  273 (512)
Q Consensus       195 ~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~-~~~~~~~~~~~~~~~~~~~~l~~~i~~~  273 (512)
                      ..+..+++++++...||.+....    +....+...+..  ....+|++.. +++.    ...+......+.+.+.+.+.
T Consensus       156 ~~~~~~~~~~~~~~~~g~~~~~~----~~~~~~~~~~~~--~~~~~p~l~~~~~~~----~~~~~~~~~~~~~~~~~~~~  225 (475)
T 3b98_A          156 NLCYSLLFKTGYLTVFGAENNNS----AALTQIYEEFRR--FDKLLPKLARTTVNK----EEKQIASAAREKLWKWLTPS  225 (475)
T ss_dssp             HHHHHHHHHHHHHHHHCCTTSCH----HHHHHHHHHHHH--HHHHHHHHHTTCCCH----HHHHHHHHHHHHHHHHHSCT
T ss_pred             HHHHHHHHHHhhhheeCCccccc----hhcHHHHHHHHH--HHhhhHHHHHHhcCh----hhhHHHHHHHHHHHHHHHHH
Confidence            88899999999888899543221    122222221111  1112343211 1111    11111222222222222111


Q ss_pred             hhhhhcccccccCCcHHHHHHHhccccccccCCCHHHHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHHHHHH
Q 039293          274 ESNVLTGEAESYGNDLLGILMRAYHSADETQKISLDDLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARKEVLE  353 (512)
Q Consensus       274 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~  353 (512)
                      ...     ......|+++.+++...+.   ..++++++. +++.+++||+|||+++++|++++|++||++|+++++|++ 
T Consensus       226 ~~~-----~~~~~~d~l~~ll~~~~~~---~~~~~~~i~-~~~~~l~ag~~TTa~~l~~~l~~L~~~P~~~~~l~~Ei~-  295 (475)
T 3b98_A          226 GLD-----RKPREQSWLGSYVKQLQDE---GIDAEMQRR-AMLLQLWVTQGNAGPAAFWVMGYLLTHPEALRAVREEIQ-  295 (475)
T ss_dssp             TSC-----CCCCTTSHHHHHHHHHHHT---TCCHHHHHH-HHHHHHHHHHSSHHHHHHHHHHHHHTCHHHHHHHHHHHC-
T ss_pred             Hhh-----ccccccHHHHHHHHHHHHc---CCCHHHHHH-HHHHHHHHccccHHHHHHHHHHHHHcCHHHHHHHHHHHh-
Confidence            111     1234579999999764432   357788888 999999999999999999999999999999999999998 


Q ss_pred             HhCCCCCChhhhccchhHHHHHHhhhccCCCCccccceecccccc-----CCeeeCCCCEEEEccch-hccCCCCcCCCC
Q 039293          354 LLGQQNPSADNISRLKIVGMIINETLRLYPPFVVFVREVKKEVKL-----GDLIVPANVDVTIPVIA-VHHDPQIWGEDF  427 (512)
Q Consensus       354 ~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~~-----~g~~IpkG~~v~~~~~~-~~~d~~~~~~~p  427 (512)
                       .++..++.+++.+||||+|||+|+||++|+ +.++|.+.+|+++     +||.||||+.|+++.++ +||||++| +||
T Consensus       296 -~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~-~~~~R~~~~d~~l~~~~g~g~~Ip~Gt~V~~~~~~~~~rdp~~~-~dP  372 (475)
T 3b98_A          296 -GGKHLRLEERQKNTPVFDSVLWETLRLTAA-ALITRDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIH-QQP  372 (475)
T ss_dssp             -------------CCHHHHHHHHHHHHHHEE-ECEEEEECSCEEEECTTSCEEEECTTCEEEECTCCCCCTCTTTS-SST
T ss_pred             -cCCCCCCHHHHhcCHHHHHHHHHHHhcCCc-cceeEEecCCeEeecCCCCeEEECCCCEEEeCcHHHhcCChhhc-CCc
Confidence             344457999999999999999999999986 6779999999999     88999999999999999 99999999 999


Q ss_pred             CCCCCCCCCCCCCccc--------cCCCccccccCCCcccccchHHHHHHHHHHHHHHHhhcEEEeCCCCccCC------
Q 039293          428 HLYKPERFAQGVPKAT--------SNNMAAFLPFGLGPRTCVGFNFTIIEAKIALSMILRRYKFTLSPNYVHSP------  493 (512)
Q Consensus       428 ~~F~P~Rfl~~~~~~~--------~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~~~------  493 (512)
                      ++|+||||++.++...        ..+. .++|||+|+|.|+|++||++|++++++.||++|++++.++....+      
T Consensus       373 ~~F~PeRfl~~~~~~~~~~~~~~~~~~~-~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~  451 (475)
T 3b98_A          373 EMFQFDRFLNADRTEKKDFFKNGARVKY-PSVPWGTEDNLCPGRHFAVHAIKELVFTILTRFDVELCDKNATVPLVDPSR  451 (475)
T ss_dssp             TSCCTTTTBCTTSCBCCCCBSSSCBCSC-SCCTTCSTTSCCTTHHHHHHHHHHHHHHHHHHEEEEESSTTCCCCCBCGGG
T ss_pred             ccCCcchhcCCCCCcccccccccccccc-CccCcCCCCCCCCCHHHHHHHHHHHHHHHHHhEEEEECCCCCCCCCCCccc
Confidence            9999999997543211        1234 799999999999999999999999999999999999976532211      


Q ss_pred             CcceeeecCCCceEEEEeC
Q 039293          494 VPRITLCPQHGIQVMLRAL  512 (512)
Q Consensus       494 ~~~~~~~~~~~~~v~~~~r  512 (512)
                      ....+..|..+++|++++|
T Consensus       452 ~~~~~~~p~~~~~~~~~~R  470 (475)
T 3b98_A          452 YGFGILQPAGDLEIRYRIR  470 (475)
T ss_dssp             TBEEECCBSSCCEEEEEEC
T ss_pred             ccccccCCCCCceEEEEec
Confidence            1224567888999999998


No 27 
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Probab=100.00  E-value=6e-66  Score=504.32  Aligned_cols=392  Identities=18%  Similarity=0.247  Sum_probs=311.5

Q ss_pred             CCCCCCCCccCCCCHHHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCCeEEEec-CCeeEEEecCHHHHHHHH
Q 039293           41 QGIKGPSYKFFHGNNKEIINMKNEMIMSSSPMELSHQIFPITEPHIYSWIKLYGTNFLMWH-GSQAELVVAEPKLIKEIM  119 (512)
Q Consensus        41 ~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~vf~~~~-~~~~~vvv~dpe~i~~i~  119 (512)
                      +.+|||+++|++|++.....                   .+++.++.++ ++||+||++++ ++.+.++++||+.+++++
T Consensus        26 ~~~PGP~~~p~lG~~~~~~~-------------------~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl   85 (436)
T 2cd8_A           26 QGTTASPPVLDLGALGQDFA-------------------ADPYPTYARL-RAEGPAHRVRTPEGDEVWLVVGYDRARAVL   85 (436)
T ss_dssp             --------CCBHHHHHHHHH-------------------HCCHHHHHHH-HTTCSEEEEECSSCCEEEEECSHHHHHHHH
T ss_pred             cCCCCCCccccCCCCCcccc-------------------cChHHHHHHH-HHhCCeeeeccCCCCeEEEEcCHHHHHHHH
Confidence            38999999999999863221                   1346688889 99999999998 778899999999999999


Q ss_pred             hcCCCCCCCchh--h-h---HhhhcCceeccCCchHHHHhhhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhcCCcccH
Q 039293          120 NNNRSFPKREPR--E-Y---LKLLGNGLVTTRGEKWLKKRKLAVNAFHAENLKNMIPDMIASVDMMLERWRDYEGKEIDA  193 (512)
Q Consensus       120 ~~~~~~~~~~~~--~-~---~~~~g~~l~~~~g~~w~~~Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~~~~vd~  193 (512)
                      .++ .|.+++..  . .   ....+.++++.+|+.|+++|+++.+.|+...++.+.+.+.+.++++++.|.+..++++|+
T Consensus        86 ~~~-~f~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~vd~  164 (436)
T 2cd8_A           86 ADP-RFSKDWRNSTTPLTEAEAALNHNMLESDPPRHTRLRKLVAREFTMRRVELLRPRVQEIVDGLVDAMLAAPDGRADL  164 (436)
T ss_dssp             HCT-TEECCGGGCSSCCCTTGGGTCCSGGGCCTTHHHHHHHHHGGGSSHHHHHTTHHHHHHHHHHHHHHHHTCTTSCEEH
T ss_pred             cCC-CCcccccccccccccccccccccccccCchHHHHHHHHhHHhhCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcch
Confidence            877 56554421  1 1   133467888899999999999999999999999999999999999999997432468999


Q ss_pred             HHHH-HHHhHhHhhhcccCccccccccHHHHHHHHHHHHHHhhhhcccccccccccCcchhhhHHHHHHHHHHHHHHHHH
Q 039293          194 YREI-KVLTSEIISRTAFGSCYLEGENIFNMLTKMAYIVAKKKYKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKVVKK  272 (512)
Q Consensus       194 ~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~  272 (512)
                      ..++ ..++.++++. +||.+.++.+.+..    +...+..       +   .  +   .++..++..++.+++.+.+++
T Consensus       165 ~~~~~~~~~~~vi~~-~~G~~~~~~~~~~~----~~~~~~~-------~---~--~---~~~~~~~~~~~~~~~~~~i~~  224 (436)
T 2cd8_A          165 MESLAWPLPITVISE-LLGVPEPDRAAFRV----WTDAFVF-------P---D--D---PAQAQTAMAEMSGYLSRLIDS  224 (436)
T ss_dssp             HHHTTTHHHHHHHHH-HHTCCGGGHHHHHH----HHHHHHS-------C---S--S---TTHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH-HhCCCHHHHHHHHH----HHHHHhc-------c---C--C---HHHHHHHHHHHHHHHHHHHHH
Confidence            9987 5799999998 69987653222222    2111111       0   0  0   144667788888999999988


Q ss_pred             HhhhhhcccccccCCcHHHHHHHhccccccccCCCHHHHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHHHHH
Q 039293          273 RESNVLTGEAESYGNDLLGILMRAYHSADETQKISLDDLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARKEVL  352 (512)
Q Consensus       273 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~  352 (512)
                      ++++        ...|+++.|+++..++  +..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|+ 
T Consensus       225 r~~~--------~~~d~l~~ll~~~~~~--~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~e~-  293 (436)
T 2cd8_A          225 KRGQ--------DGEDLLSALVRTSDED--GSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAALRADM-  293 (436)
T ss_dssp             HTTS--------CCCSHHHHHHHHHHHC--TTTSCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCHHHHHHHHHCG-
T ss_pred             HhcC--------CCCCHHHHHHHhhhcc--CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHhhCh-
Confidence            7754        2469999999875432  3569999999999999999999999999999999999999999999984 


Q ss_pred             HHhCCCCCChhhhccchhHHHHHHhhhccCCCCc-cccceeccccccCCeeeCCCCEEEEccchhccCCCCcCCCCCCCC
Q 039293          353 ELLGQQNPSADNISRLKIVGMIINETLRLYPPFV-VFVREVKKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGEDFHLYK  431 (512)
Q Consensus       353 ~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~-~~~R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~p~~F~  431 (512)
                                      .|++|||+|+||++|+++ .++|.+.+|++++||.||||+.|+++.+++||||++| +||++|+
T Consensus       294 ----------------~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~  356 (436)
T 2cd8_A          294 ----------------TLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERF-PDPHRFD  356 (436)
T ss_dssp             ----------------GGHHHHHHHHHHHHCSBSSCCCBEESSCEEETTEEECTTCCEEECHHHHTTCTTTS-SSTTSCC
T ss_pred             ----------------hhHHHHHHHHHHhcCcccCceeEEeCCCeEECCEEECCCCEEEeChHHhCCCcccC-CCccccC
Confidence                            379999999999999999 6799999999999999999999999999999999999 9999999


Q ss_pred             CCCCCCCCCccccCCCccccccCCCcccccchHHHHHHHHHHHHHHHhhc-EEEeCCC-CccCCCcceeeecCCCceEEE
Q 039293          432 PERFAQGVPKATSNNMAAFLPFGLGPRTCVGFNFTIIEAKIALSMILRRY-KFTLSPN-YVHSPVPRITLCPQHGIQVML  509 (512)
Q Consensus       432 P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~la~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~v~~  509 (512)
                      ||||-          . .++|||.|+|.|+|++||++|++++++.|+++| ++++..+ .........++++..+++|++
T Consensus       357 PeR~~----------~-~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~  425 (436)
T 2cd8_A          357 IRRDT----------A-GHLAFGHGIHFCIGAPLARLEARIAVRALLERCPDLALDVSPGELVWYPNPMIRGLKALPIRW  425 (436)
T ss_dssp             TTSCC----------T-TCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHSCTTCCBCSCGGGCCBCCCTTBCCBSCCEEC-
T ss_pred             CCCCC----------C-CCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCceecCCCccceeccCcccCCcceeEEEE
Confidence            99961          2 689999999999999999999999999999999 6998632 222233344557788999999


Q ss_pred             EeC
Q 039293          510 RAL  512 (512)
Q Consensus       510 ~~r  512 (512)
                      ++|
T Consensus       426 ~~r  428 (436)
T 2cd8_A          426 RRG  428 (436)
T ss_dssp             ---
T ss_pred             ecC
Confidence            887


No 28 
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Probab=100.00  E-value=3.7e-64  Score=490.65  Aligned_cols=399  Identities=16%  Similarity=0.215  Sum_probs=321.5

Q ss_pred             ccCCCCHHHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhC-CeEEEecCCeeEEEecCHHHHHHHHhcCCCCCC
Q 039293           49 KFFHGNNKEIINMKNEMIMSSSPMELSHQIFPITEPHIYSWIKLYG-TNFLMWHGSQAELVVAEPKLIKEIMNNNRSFPK  127 (512)
Q Consensus        49 ~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG-~vf~~~~~~~~~vvv~dpe~i~~i~~~~~~~~~  127 (512)
                      .|++||+..+..                    +++.++.+++++|| +||++++++.+.+++++|++++.++. ...|.+
T Consensus         8 ~P~lG~~~~~~~--------------------~p~~~~~~l~~~yg~pv~~~~~~g~~~v~v~~~~~~~~l~~-~~~~~~   66 (417)
T 1izo_A            8 DKSLDNSLTLLK--------------------EGYLFIKNRTERYNSDLFQARLLGKNFICMTGAEAAKVFYD-TDRFQR   66 (417)
T ss_dssp             CCCTTHHHHHHH--------------------HGGGHHHHHHHHTTSSEEEEEETTEEEEEECSHHHHHHHTC-TTTEEC
T ss_pred             CCccchHHHHhh--------------------CcHHHHHHHHHHhCCCeEEeecCCccEEEECCHHHHHHHhc-cccccc
Confidence            389999999864                    23567999999998 89999998888999999999986544 334543


Q ss_pred             Cc-h-hh-hHhhhc-CceeccCCchHHHHhhhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhcCCcccHHHHHHHHhHh
Q 039293          128 RE-P-RE-YLKLLG-NGLVTTRGEKWLKKRKLAVNAFHAENLKNMIPDMIASVDMMLERWRDYEGKEIDAYREIKVLTSE  203 (512)
Q Consensus       128 ~~-~-~~-~~~~~g-~~l~~~~g~~w~~~Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~~~~vd~~~~~~~~~~~  203 (512)
                      .. . .. ...++| .+++..+|+.|+++|+++.+.|+.+.++.+.+.+.+.++++++.|.+  ++++|+.+++..++++
T Consensus        67 ~~~~~~~~~~~~~g~~~l~~~dg~~h~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~--~~~~dl~~~~~~~~~~  144 (417)
T 1izo_A           67 QNALPKRVQKSLFGVNAIQGMDGSAHIHRKMLFLSLMTPPHQKRLAELMTEEWKAAVTRWEK--ADEVVLFEEAKEILCR  144 (417)
T ss_dssp             TTCSCHHHHTTTTCTTCGGGCCHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHHHTT--SSEEEHHHHHHHHHHH
T ss_pred             ccccccchhhhhccccceeecCChHHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHHhc--CCCeeHHHHHHHHHHH
Confidence            32 1 12 334567 46888899999999999999999999999999999999999999965  3689999999999999


Q ss_pred             HhhhcccCccccccccHHHHHHHHHHHHHHhhhhcccccccccccCcchhhhHHHHHHHHHHHHHHHHHHhhhhhccccc
Q 039293          204 IISRTAFGSCYLEGENIFNMLTKMAYIVAKKKYKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKVVKKRESNVLTGEAE  283 (512)
Q Consensus       204 ~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~  283 (512)
                      +++.+ ||.+.++.+ ..+....+...+...  ....|         ...+..++.+.+.+++.+.++++++.  ..  .
T Consensus       145 vi~~~-~G~~~~~~~-~~~~~~~~~~~~~~~--~~~~~---------~~~~~~~~~~~~~~~~~~~i~~r~~~--~~--~  207 (417)
T 1izo_A          145 VACYW-AGVPLKETE-VKERADDFIDMVDAF--GAVGP---------RHWKGRRARPRAEEWIEVMIEDARAG--LL--K  207 (417)
T ss_dssp             HHHHH-HTCCCCTTT-HHHHHHHHHHHHHHT--TCCSH---------HHHHHHHHHHHHHHHHHHHHHHHHTT--SS--C
T ss_pred             HHHHH-cCCCCCchH-HHHHHHHHHHHHhhc--ccCCc---------cchhHHHHHHHHHHHHHHHHHHHHhh--cc--C
Confidence            99998 698876432 222222222222110  00111         12345677788899999999888765  11  1


Q ss_pred             ccCCcHHHHHHHhccccccccCCCHHHHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhCCCCCChh
Q 039293          284 SYGNDLLGILMRAYHSADETQKISLDDLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARKEVLELLGQQNPSAD  363 (512)
Q Consensus       284 ~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~  363 (512)
                      ....|+++.++...+++  +..++++++..++..++ ||++||+++++|++++|++||++|+++++|             
T Consensus       208 ~~~~d~l~~ll~~~~~~--g~~l~~~~~~~~~~~~~-ag~~tt~~~l~~~l~~L~~~P~~~~~l~~E-------------  271 (417)
T 1izo_A          208 TTSGTALHEMAFHTQED--GSQLDSRMAAIELINVL-RPIVAISYFLVFSALALHEHPKYKEWLRSG-------------  271 (417)
T ss_dssp             CCTTSHHHHHHHCBCTT--SCBCCHHHHHHHHHHHH-HHHHTHHHHHHHHHHHHHHSTHHHHHHHTC-------------
T ss_pred             CCcCCHHHHHHHhcccc--CCCCCHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHhhCHHHHHHHHhc-------------
Confidence            23468999999775433  44688888877776654 999999999999999999999999999997             


Q ss_pred             hhccchhHHHHHHhhhccCCCCccccceeccccccCCeeeCCCCEEEEccchhccCCCCcCCCCCCCCCCCCCCCCCccc
Q 039293          364 NISRLKIVGMIINETLRLYPPFVVFVREVKKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGEDFHLYKPERFAQGVPKAT  443 (512)
Q Consensus       364 ~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~  443 (512)
                         +++|++|||+|+||++|+++.++|.+.+|++++||.||||+.|+++.+++||||++| +||++|+||||++.++   
T Consensus       272 ---~~~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~rdp~~~-~dp~~F~P~R~~~~~~---  344 (417)
T 1izo_A          272 ---NSREREMFVQEVRRYYPFGPFLGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLW-DHPDEFRPERFAEREE---  344 (417)
T ss_dssp             ---CHHHHHHHHHHHHHHSCCCCEEEEEECSCEEETTEEECTTCEEEEEHHHHHTCTTTS-SSTTSCCGGGGTTCCC---
T ss_pred             ---CCHHHHHHHHHHhhcCCcccccceeecCCeeECCEEECCCCEEEecHHHhhcCcccc-CCccccChhhcCCCCC---
Confidence               479999999999999999999999999999999999999999999999999999999 9999999999997521   


Q ss_pred             cCCCccccccCCC----cccccchHHHHHHHHHHHHHHHhhcEEEeCCCCccCCCcceeeecCCCceEEEEeC
Q 039293          444 SNNMAAFLPFGLG----PRTCVGFNFTIIEAKIALSMILRRYKFTLSPNYVHSPVPRITLCPQHGIQVMLRAL  512 (512)
Q Consensus       444 ~~~~~~~~~Fg~G----~r~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  512 (512)
                       .+. .++|||+|    +|.|+|++||++|++++++.|+++|++++.++........++..|+++++|++++|
T Consensus       345 -~~~-~~~~FG~G~r~~~r~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~r  415 (417)
T 1izo_A          345 -NLF-DMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYDVPEQSLHYSLARMPSLPESGFVMSGIRR  415 (417)
T ss_dssp             -CSS-SCCTTCSSCTTSSSCCTTHHHHHHHHHHHHHHHHHTEEEECCSCCCCCCSSSSSCCCTTCCEEEEEEE
T ss_pred             -CCc-ceeCCCCCCCCCCCcCCCHHHHHHHHHHHHHHHHHhCeEEeCCCCcCcccccCCCCCCCCceEeeeeC
Confidence             233 79999999    59999999999999999999999999998765333233346678999999999987


No 29 
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=100.00  E-value=3.4e-66  Score=499.70  Aligned_cols=383  Identities=23%  Similarity=0.383  Sum_probs=309.6

Q ss_pred             CCCCCccCCCCHHHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCCeEEEecCCeeEEEecCHHHHHHHHhcCC
Q 039293           44 KGPSYKFFHGNNKEIINMKNEMIMSSSPMELSHQIFPITEPHIYSWIKLYGTNFLMWHGSQAELVVAEPKLIKEIMNNNR  123 (512)
Q Consensus        44 Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~vf~~~~~~~~~vvv~dpe~i~~i~~~~~  123 (512)
                      |++..+|++||++.+..                    +++.++.+++++||+||+ ++|+.+.++++||+.+++++.++ 
T Consensus         2 ~~~~~~p~iGnl~~~~~--------------------~p~~~~~~l~~~yGpv~~-~~g~~~~vvv~~~~~i~~il~~~-   59 (389)
T 1n97_A            2 KRLSLREAWPYLKDLQQ--------------------DPLAVLLAWGRAHPRLFL-PLPRFPLALIFDPEGVEGALLAE-   59 (389)
T ss_dssp             EECCHHHHHHHHHHHHH--------------------CHHHHHHHHHHHCSEEEE-CCTTCCEEEECSHHHHHHHHHCT-
T ss_pred             cccccccccccHHHHhh--------------------ChHHHHHHHHHHcCCeeE-ecCCccEEEECCHHHHHHHHhcC-
Confidence            34667899999998743                    235679999999999999 99998899999999999999887 


Q ss_pred             CCCCCc-hhh-hHhhhcCceeccCCchHHHHhhhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhcCCcccHHHHHHHHh
Q 039293          124 SFPKRE-PRE-YLKLLGNGLVTTRGEKWLKKRKLAVNAFHAENLKNMIPDMIASVDMMLERWRDYEGKEIDAYREIKVLT  201 (512)
Q Consensus       124 ~~~~~~-~~~-~~~~~g~~l~~~~g~~w~~~Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~~~~vd~~~~~~~~~  201 (512)
                      .|.+++ ... ...+.|.++++.+|+.|+++|+++.+.|+..+++.+.+.+.+.++++++.|.   ++++|+.+++..++
T Consensus        60 ~f~~~~~~~~~~~~~~g~~l~~~~g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~---~~~~dl~~~~~~~~  136 (389)
T 1n97_A           60 GTTKATFQYRALSRLTGRGLLTDWGESWKEARKALKDPFLPKNVRGYREAMEEEARAFFGEWR---GEERDLDHEMLALS  136 (389)
T ss_dssp             TEECCSHHHHHHHHHHCSSTTTCCHHHHHHHHHHHCGGGSHHHHHTTHHHHHHHHHHHHHTCC---SCCEEHHHHHHHHH
T ss_pred             CCCCChhHHHHHHHHhCCccccCCcHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHHHHHcc---CCcCcHHHHHHHHH
Confidence            787765 333 4456688888899999999999999999999999999999999999999986   46899999999999


Q ss_pred             HhHhhhcccCccccccccHHHHHHHHHHHHHHhhhhcccccccccccCcchhhhHHHHHHHHHHHHHHHHHHhhhhhccc
Q 039293          202 SEIISRTAFGSCYLEGENIFNMLTKMAYIVAKKKYKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKVVKKRESNVLTGE  281 (512)
Q Consensus       202 ~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~  281 (512)
                      .++++.++||.+.++  .+.+....+......    ..++.+ .++|....++..++.+.+.+++.+.++++        
T Consensus       137 ~~vi~~~~fG~~~~~--~~~~~~~~~~~~~~~----~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~i~~r--------  201 (389)
T 1n97_A          137 LRLLGRALFGKPLSP--SLAEHALKALDRIMA----QTRSPL-ALLDLAAEARFRKDRGALYREAEALIVHP--------  201 (389)
T ss_dssp             HHHHHHHHHSSCCCH--HHHHHHHHHHHHHHH----HHHCGG-GGGCHHHHHHHHHHHHHHHHHHGGGTTST--------
T ss_pred             HHHHHHHHcCCcchH--HHHHHHHHHHHHHHH----HHhhHH-HhcCCchhHHHHHHHHHHHHHHHHHHHHH--------
Confidence            999999999998872  333333333332211    111112 33332212223333333333332222111        


Q ss_pred             ccccCCcHHHHHHHhccccccccCCCHHHHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhCCCCCC
Q 039293          282 AESYGNDLLGILMRAYHSADETQKISLDDLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARKEVLELLGQQNPS  361 (512)
Q Consensus       282 ~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~  361 (512)
                                 ++         ..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++.+.      
T Consensus       202 -----------ll---------~~l~~~~l~~~~~~~~~aG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~~~~------  255 (389)
T 1n97_A          202 -----------PL---------SHLPRERALSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAAL------  255 (389)
T ss_dssp             -----------TG---------GGSCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTCHHHHHHHHHCHHHHH------
T ss_pred             -----------hc---------ccCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH------
Confidence                       11         1478999999999999999999999999999999999999999999998773      


Q ss_pred             hhhhccchhHHHHHHhhhccCCCCccccceeccccccCCeeeCCCCEEEEccchhccCCCCcCCCCCCCCCCCCCCCCCc
Q 039293          362 ADNISRLKIVGMIINETLRLYPPFVVFVREVKKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGEDFHLYKPERFAQGVPK  441 (512)
Q Consensus       362 ~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~  441 (512)
                                 |||+|+||++|+++..+|.+.+|++++||.||||+.|.++.+++|||  +| +||++|+||||+++ + 
T Consensus       256 -----------a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rd--~~-~dp~~F~PeR~l~~-~-  319 (389)
T 1n97_A          256 -----------AAFQEALRLYPPAWILTRRLERPLLLGEDRLPPGTTLVLSPYVTQRL--HF-PDGEAFRPERFLEE-R-  319 (389)
T ss_dssp             -----------HHHHHHHHHSCSSCCEEEEESSCEEETTEEECTTCEEEECHHHHHHH--SS-TTTTSCCTTHHHHS-C-
T ss_pred             -----------HHHHHHHhcCCCccccceeeCCCceECCEEeCCCCEEEECHHHHhhh--cC-CCccccCCccCCCC-C-
Confidence                       99999999999999989999999999999999999999999999999  99 99999999999864 1 


Q ss_pred             cccCCCccccccCCCcccccchHHHHHHHHHHHHHHHhhcEEEeCCCCccCCCcceeeecCCCceEEEEeC
Q 039293          442 ATSNNMAAFLPFGLGPRTCVGFNFTIIEAKIALSMILRRYKFTLSPNYVHSPVPRITLCPQHGIQVMLRAL  512 (512)
Q Consensus       442 ~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  512 (512)
                       ...+. .++|||+|+|.|+|++||++|++++++.|+++|++++.++..+  ..+++..|..+++|++++|
T Consensus       320 -~~~~~-~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~--~~~~~~~p~~~~~v~~~~~  386 (389)
T 1n97_A          320 -GTPSG-RYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRLDPLPFPRV--LAQVTLRPEGGLPARPREE  386 (389)
T ss_dssp             -CCCBT-TBCTTCCSTTCCTTHHHHHHHHHHHHHHHHTTCBCCCCCCCCE--EESSSEEETTCCEECCBC-
T ss_pred             -CCCCC-CccCCCCCCCCCchHHHHHHHHHHHHHHHHHhceEEeCCCCcc--cceEEeeeCCCceEEEeec
Confidence             12233 7999999999999999999999999999999999998766443  4456778999999999876


No 30 
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A*
Probab=100.00  E-value=2.6e-63  Score=484.40  Aligned_cols=401  Identities=14%  Similarity=0.174  Sum_probs=320.4

Q ss_pred             CCCCCCccCCCCHHHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHh-CCeEEEecCCeeEEEecCHHHHHHHHhc
Q 039293           43 IKGPSYKFFHGNNKEIINMKNEMIMSSSPMELSHQIFPITEPHIYSWIKLY-GTNFLMWHGSQAELVVAEPKLIKEIMNN  121 (512)
Q Consensus        43 ~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ky-G~vf~~~~~~~~~vvv~dpe~i~~i~~~  121 (512)
                      +|||   |++||...+..                    +++.++.+++++| |+||++.+++.+.+++++|+.++ ++.+
T Consensus         4 pPg~---P~iG~~~~~~~--------------------~p~~~~~~l~~~y~gpv~~~~~~g~~~~vv~~~~~~~-~l~~   59 (415)
T 3awm_A            4 TPHT---KGPDETLSLLA--------------------DPYRFISRQCQRLGANAFESRFLLKKTNCLKGAKAAE-IFYD   59 (415)
T ss_dssp             --------CCCCHHHHHH--------------------STTTHHHHHHHHHTSSEEEEEETTEEEEEEESHHHHH-HHTC
T ss_pred             CCCC---CccchHHHHHh--------------------ChHHHHHHHHHHhCCCeEEEecCCCcEEEEeCHHHHH-HHhc
Confidence            6666   89999998853                    3356899999999 79999998888899999999997 6665


Q ss_pred             CCCCCCCch--hh-hHhhhc-CceeccCCchHHHHhhhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhcCCcccHHHHH
Q 039293          122 NRSFPKREP--RE-YLKLLG-NGLVTTRGEKWLKKRKLAVNAFHAENLKNMIPDMIASVDMMLERWRDYEGKEIDAYREI  197 (512)
Q Consensus       122 ~~~~~~~~~--~~-~~~~~g-~~l~~~~g~~w~~~Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~~~~vd~~~~~  197 (512)
                      ...|.+...  .. ...++| .+++..+|+.|+++|+++.+.|+.+.++.+.+.+.+.++++++.|.+.  +++|+.+++
T Consensus        60 ~~~f~~~~~~~~~~~~~~~g~~~l~~~dg~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~~~~~--~~vdl~~~~  137 (415)
T 3awm_A           60 TTRFEREGAMPVAIQKTLLGQGGVQGLDGETHRHRKQMFMGLMTPERVRALAQLFEAEWRRAVPGWTRK--GEIVFYDEL  137 (415)
T ss_dssp             TTTEECTTCSCHHHHTTTSCSSSGGGCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHH--SEEEHHHHH
T ss_pred             ccccccccccchhhhhhccCCcceeecCcHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhccC--CcEeHHHHH
Confidence            555654321  11 334566 578888999999999999999999999999999999999999999763  689999999


Q ss_pred             HHHhHhHhhhcccCccccccccHHHHHHHHHHHHHHhhhhcccccccccccCcchhhhHHHHHHHHHHHHHHHHHHhhhh
Q 039293          198 KVLTSEIISRTAFGSCYLEGENIFNMLTKMAYIVAKKKYKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKVVKKRESNV  277 (512)
Q Consensus       198 ~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~  277 (512)
                      ..+++++++.+ ||.+.++. ++.+....+...+..      ++.   ..  ....+..++.+.+.+++.+.++++++. 
T Consensus       138 ~~~~~~vi~~~-~G~~~~~~-~~~~~~~~~~~~~~~------~~~---~~--~~~~~~~~~~~~~~~~~~~~i~~r~~~-  203 (415)
T 3awm_A          138 HEPLTRAVCAW-AGVPLPDD-EAGNRAGELRALFDA------AGS---AS--PRHLWSRLARRRVDAWAKRIIEGIRAG-  203 (415)
T ss_dssp             HHHHHHHHHHH-HTCCCCGG-GHHHHHHHHHHHHHS------TTC---SS--HHHHHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             HHHHHHHHHHH-cCCCCCcc-hHHHHHHHHHHHHHH------hcc---cC--chHHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence            99999999999 89887643 222222222222111      110   01  123446677788899999999888764 


Q ss_pred             hcccccccCCcHHHHHHHhccccccccCCCHHHHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhCC
Q 039293          278 LTGEAESYGNDLLGILMRAYHSADETQKISLDDLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARKEVLELLGQ  357 (512)
Q Consensus       278 ~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~  357 (512)
                       ..  .....|+++.|+...+++  +..++++++..++..++ ||++||+++++|++++|++||++|+++++|       
T Consensus       204 -~~--~~~~~d~l~~ll~~~~~~--g~~~~~~~~~~~~~~~~-ag~~tt~~~l~~~l~~L~~~P~~~~~l~~e-------  270 (415)
T 3awm_A          204 -SI--GSGSGTAAYAIAWHRDRH--DDLLSPHVAAVELVNVL-RPTVAIAVYITFVAHALQTCSGIRAALVQQ-------  270 (415)
T ss_dssp             -SS--CCCTTSHHHHHHHCBCTT--SCBCCHHHHHHHHHHHH-HHHHTHHHHHHHHHHHHHHSTTHHHHHHHC-------
T ss_pred             -hh--cCCCCCHHHHHHhhhhcc--CCCCCHHHHHHHHHHHH-HhhhhHHHHHHHHHHHHHhChHHHHHHHHH-------
Confidence             11  123468999999875433  44688888887776655 999999999999999999999999999986       


Q ss_pred             CCCChhhhccchhHHHHHHhhhccCCCCccccceeccccccCCeeeCCCCEEEEccchhccCCCCcCCCCCCCCCCCCCC
Q 039293          358 QNPSADNISRLKIVGMIINETLRLYPPFVVFVREVKKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGEDFHLYKPERFAQ  437 (512)
Q Consensus       358 ~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~  437 (512)
                                ++|++|||+|+||++|+++.++|.+.+|++++||.||||+.|+++.+++||||++| +||++|+||||++
T Consensus       271 ----------~~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~G~~ip~G~~V~~~~~~~~rdp~~~-~dp~~F~P~R~~~  339 (415)
T 3awm_A          271 ----------PDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATW-ADPQEFRPERFRA  339 (415)
T ss_dssp             ----------TTHHHHHHHHHHHHSCCSCEEEEEESSCEEETTEEECTTCEEEEEHHHHHTCHHHH-SSTTSCCGGGGGG
T ss_pred             ----------HHHHHHHHHHHhhcCCCccccceeecCCeEECCEEECCCCEEEeCchhhcCCcccc-CCccccChhhcCC
Confidence                      69999999999999999999899999999999999999999999999999999999 9999999999996


Q ss_pred             CCCccccCCCccccccCCC----cccccchHHHHHHHHHHHHHHHhhcEEEeCCCCccCCCcceeeecCCCceEEEEeC
Q 039293          438 GVPKATSNNMAAFLPFGLG----PRTCVGFNFTIIEAKIALSMILRRYKFTLSPNYVHSPVPRITLCPQHGIQVMLRAL  512 (512)
Q Consensus       438 ~~~~~~~~~~~~~~~Fg~G----~r~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  512 (512)
                      .++    .+. .++|||+|    +|.|+|++||++|++++++.|+++|++++.++........++..|+++++|++++.
T Consensus       340 ~~~----~~~-~~~~FG~G~r~~~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  413 (415)
T 3awm_A          340 WDE----DSF-NFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQDLSIDFARLPALPKSGFVMRNVHI  413 (415)
T ss_dssp             CCC----CSS-SCCTTCCSCTTTSCCCTTHHHHHHHHHHHHHHHHHTCEEECCSCCCCBCTTSSSCCBTTCCEEEEEES
T ss_pred             CCC----CCC-CccCCCCCCCCCCCcCchHHHHHHHHHHHHHHHHHhcEEEeCCCCCCcCcCCCccccCCCceEEEEeC
Confidence            521    233 79999999    59999999999999999999999999998765333233446778999999999863


No 31 
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Probab=100.00  E-value=9.3e-64  Score=485.98  Aligned_cols=400  Identities=17%  Similarity=0.212  Sum_probs=310.3

Q ss_pred             HHHHHHHhHhhhcchhhhHHHHHHCCCCCCCCccCCCCHHHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCCe
Q 039293           17 LLFVIKLLNKIWWTPIRIQSQMRSQGIKGPSYKFFHGNNKEIINMKNEMIMSSSPMELSHQIFPITEPHIYSWIKLYGTN   96 (512)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~v   96 (512)
                      ++.++.++|+++++|+.        ++|||+..          .                    +++.++.++++ ||+|
T Consensus         3 ~~~~~~~iyr~~~~pl~--------~~PGp~~~----------~--------------------~p~~~~~~l~~-~gpv   43 (411)
T 2jjn_A            3 ADVETTCCARRTLTTID--------EVPGMADE----------T--------------------ALLDWLGTMRE-KQPV   43 (411)
T ss_dssp             --------------CCC--------SCCCSSCH----------H--------------------HHHHHHHHHHH-HCSE
T ss_pred             hhhHhHHhhhcccCCCC--------CCCCcccc----------c--------------------ChHHHHHHHHH-hCCc
Confidence            34556689999999999        99998721          1                    12456778865 9998


Q ss_pred             EEEecCCeeEEEecCHHHHHHHHhcCCCCCCCchhhhHh--hhcCceeccCCchHHHHhhhhcCcCCHHHHhhhHHHHHH
Q 039293           97 FLMWHGSQAELVVAEPKLIKEIMNNNRSFPKREPREYLK--LLGNGLVTTRGEKWLKKRKLAVNAFHAENLKNMIPDMIA  174 (512)
Q Consensus        97 f~~~~~~~~~vvv~dpe~i~~i~~~~~~~~~~~~~~~~~--~~g~~l~~~~g~~w~~~Rr~~~~~~~~~~l~~~~~~i~~  174 (512)
                         ++++.+.++++|++.+++++.+.+.|.+++......  ..+.++++.+|+.|+++|+++.+.|+...++.+.+.+++
T Consensus        44 ---~~~~~~~~vv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~fs~~~l~~~~~~i~~  120 (411)
T 2jjn_A           44 ---WQDRYGVWHVFRHADVQTVLRDTATFSSDPTRVIEGASPTPGMIHEIDPPEHRALRKVVSSAFTPRTISDLEPRIRD  120 (411)
T ss_dssp             ---EECTTSCEEECSHHHHHHHHHCTTTEESCGGGGSTTCCCCTTCGGGCCTTHHHHHHHHHHHHSCHHHHHTTHHHHHH
T ss_pred             ---ccCCCCeEEECCHHHHHHHHcCcccccCcccccCCcccccccccccCCchHHHHHHHHhhhhcCHHHHHHHHHHHHH
Confidence               567667999999999999998765676654322222  235678888999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhcCCcccHHHHH-HHHhHhHhhhcccCccccccccHHHHHHHHHHHHHHhhhhcccccccccccCcchh
Q 039293          175 SVDMMLERWRDYEGKEIDAYREI-KVLTSEIISRTAFGSCYLEGENIFNMLTKMAYIVAKKKYKLEIPGIGKLLKTNDDI  253 (512)
Q Consensus       175 ~~~~li~~l~~~~~~~vd~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~  253 (512)
                      .++++++.    .++++|+...+ ..+++++++.+ ||.+.++.+.+.+....+.    ..    ..|.+   ++....+
T Consensus       121 ~~~~ll~~----~~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~~~~~~~~~~~~~----~~----~~~~~---~~p~~~~  184 (411)
T 2jjn_A          121 VTRSLLAD----AGESFDLVDVLAFPLPVTIVAEL-LGLPPMDHEQFGDWSGALV----DI----QMDDP---TDPALAE  184 (411)
T ss_dssp             HHHHHHHT----SCSEEEHHHHTTTHHHHHHHHHH-HTCCSCCCSTTCCHHHHHH----HS----CCSCT---TCHHHHH
T ss_pred             HHHHHHhc----CCCceeHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHH----hc----cCccc---cchHHHH
Confidence            99999988    24689999665 68999999998 9998765444433322221    11    12211   1111234


Q ss_pred             hhHHHHHHHHHHHHHHHHHHhhhhhcccccccCCcHHHHHHHhccccccccCCCHHHHHHHHHHHHHhchhhhHHHHHHH
Q 039293          254 ESDKLEQDIRDSIIKVVKKRESNVLTGEAESYGNDLLGILMRAYHSADETQKISLDDLIDECKTFYVAGTDTTASLLSWT  333 (512)
Q Consensus       254 ~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~  333 (512)
                      +..++.+.+.+++.+.+++++++        ...|+++.|+++..+   +..++++++.+++..+++||+|||+++++|+
T Consensus       185 ~~~~~~~~~~~~~~~~i~~r~~~--------~~~d~l~~ll~~~~~---~~~l~~~el~~~~~~~~~AG~eTt~~~l~~~  253 (411)
T 2jjn_A          185 RIADVLNPLTAYLKARCAERRAD--------PGDDLISRLVLAEVD---GRALDDEEAANFSTALLLAGHITTTVLLGNI  253 (411)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHHHCCBT---TBCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHhcccC---CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence            56677788888999988887754        247999999987532   4579999999999999999999999999999


Q ss_pred             HHHHhhChHHHHHHHHHHHHHhCCCCCChhhhccchhHHHHHHhhhccCCCCccccceeccccccCCeeeCCCCEEEEcc
Q 039293          334 IFLLAIHSDWQDKARKEVLELLGQQNPSADNISRLKIVGMIINETLRLYPPFVVFVREVKKEVKLGDLIVPANVDVTIPV  413 (512)
Q Consensus       334 l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~IpkG~~v~~~~  413 (512)
                      +++|++||++|+|+++|++                 |++|||+|+||++|++++++|.+.+|++++||.||||+.|+++.
T Consensus       254 l~~L~~~P~~~~~l~~E~~-----------------~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~  316 (411)
T 2jjn_A          254 VRTLDEHPAHWDAAAEDPG-----------------RIPAIVEEVLRYRPPFPQMQRTTTKATEVAGVPIPADVMVNTWV  316 (411)
T ss_dssp             HHHHHHSTHHHHHHHHCGG-----------------GHHHHHHHHHHHSCSSCEEEEEESSCEEETTEEECSSCEEEEEH
T ss_pred             HHHHHhCHHHHHHHHhCHH-----------------hHHHHHHHHhhhCCCcCCcceEECCCeEECCEEECCCCEEEech
Confidence            9999999999999999963                 89999999999999999889999999999999999999999999


Q ss_pred             chhccCCCCcCCCCCCCCCCCCCCCCCccccCCCccccccCCCcccccchHHHHHHHHHHHHHHHhhcE-EEeCCCCccC
Q 039293          414 IAVHHDPQIWGEDFHLYKPERFAQGVPKATSNNMAAFLPFGLGPRTCVGFNFTIIEAKIALSMILRRYK-FTLSPNYVHS  492 (512)
Q Consensus       414 ~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~la~ll~~f~-~~~~~~~~~~  492 (512)
                      +++||||++| +||++|+||||.+.        . .++|||.|+|.|+|++||++|++++++.|+++|+ +++.++....
T Consensus       317 ~~~~rdp~~~-~dP~~F~PeR~~~~--------~-~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~  386 (411)
T 2jjn_A          317 LSANRDSDAH-DDPDRFDPSRKSGG--------A-AQLSFGHGVHFCLGAPLARLENRVALEEIIARFGRLTVDRDDERL  386 (411)
T ss_dssp             HHHHTCTTTS-SSTTSCCTTCCCSS--------C-CCGGGCSSTTCCTTHHHHHHHHHHHHHHHHHHHSCCEECCSSCCC
T ss_pred             hhhCCChhhc-CCccccCCCCCCCC--------C-CccCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCcceECCCCcee
Confidence            9999999999 99999999998531        2 5899999999999999999999999999999996 9997432221


Q ss_pred             CCcceeeecCCCceEEEEeC
Q 039293          493 PVPRITLCPQHGIQVMLRAL  512 (512)
Q Consensus       493 ~~~~~~~~~~~~~~v~~~~r  512 (512)
                      ...........+++|++++|
T Consensus       387 ~~~~~~~~~~~~lpv~~~~~  406 (411)
T 2jjn_A          387 RHFEQIVLGTRHLPVLAGSS  406 (411)
T ss_dssp             CBCCSSSSSBSCCEEECSCC
T ss_pred             ccccccccCcceeEEEecCC
Confidence            13344556777899988765


No 32 
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1
Probab=100.00  E-value=5.5e-63  Score=483.19  Aligned_cols=384  Identities=14%  Similarity=0.167  Sum_probs=302.0

Q ss_pred             CchHHHHHHHHHhCCeEEEec-CCeeEEEecCHHHHHHHHhcCCCCCCCch-hhh----H-h-h---hc------Cceec
Q 039293           81 ITEPHIYSWIKLYGTNFLMWH-GSQAELVVAEPKLIKEIMNNNRSFPKREP-REY----L-K-L---LG------NGLVT  143 (512)
Q Consensus        81 ~~~~~~~~~~~kyG~vf~~~~-~~~~~vvv~dpe~i~~i~~~~~~~~~~~~-~~~----~-~-~---~g------~~l~~  143 (512)
                      +++..+.++.+ ||+||++++ |+.+.++|++++.+++++.+...|..++. ...    . . +   .|      .++++
T Consensus        26 ~p~~~~~~l~~-~gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~~fs~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~  104 (428)
T 1cpt_A           26 VIYPAFKWLRD-EQPLAMAHIEGYDPMWIATKHADVMQIGKQPGLFSNAEGSEILYDQNNEAFMRSISGGCPHVIDSLTS  104 (428)
T ss_dssp             HHHHHHHHHHH-HCSEEEECCTTSCCEEEECSHHHHHHHHHCTTTEESSSSCSSCCCHHHHHHHHHHTTTSSCSSCCGGG
T ss_pred             CccHHHHHHHH-hCCeeeccccCCCCeEEEccHHHHHHHHcCchhccCccccccCCcccccchhcccccccccccccccc
Confidence            35677888866 799999998 67889999999999999987656654432 111    1 2 3   43      46888


Q ss_pred             cCCchHHHHhhhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhcCCcccHHHHH-HHHhHhHhhhcccCccccccccHHH
Q 039293          144 TRGEKWLKKRKLAVNAFHAENLKNMIPDMIASVDMMLERWRDYEGKEIDAYREI-KVLTSEIISRTAFGSCYLEGENIFN  222 (512)
Q Consensus       144 ~~g~~w~~~Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~~~~vd~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~  222 (512)
                      .+|+.|+++||++++.|+...++++.+.++++++++++.|.+. ++++|+...+ ..+++++|+.+ ||.+.++.+.+.+
T Consensus       105 ~~g~~~~~~Rr~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~-~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~~~~~~~  182 (428)
T 1cpt_A          105 MDPPTHTAYRGLTLNWFQPASIRKLEENIRRIAQASVQRLLDF-DGECDFMTDCALYYPLHVVMTA-LGVPEDDEPLMLK  182 (428)
T ss_dssp             CCTTHHHHHHHHHHTTSSHHHHGGGHHHHHHHHHHHHHHHHTS-SSEEEHHHHTTTTHHHHHHHHH-HTCCGGGHHHHHH
T ss_pred             CChHHHHHHHHHhhhhhCHHHHHHHHHHHHHHHHHHHHHHHHh-CCCeehHHHHHhhhHHHHHHHH-cCCCHhHHHHHHH
Confidence            8999999999999999999999999999999999999999753 2589998665 57999999999 9987754322222


Q ss_pred             HHHHHHHHHHHhhhhcccccccccccCcchhhhHHHHHHHHHHHHHHHHHHhhhhhcccccccCCcHHHHHHHhcccccc
Q 039293          223 MLTKMAYIVAKKKYKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKVVKKRESNVLTGEAESYGNDLLGILMRAYHSADE  302 (512)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~  302 (512)
                      ....+......  ....+|++ ++++....++..++.+.+.+++.+.+++++++        ...|+++.|+++..+   
T Consensus       183 ~~~~~~~~~~~--~~~~~P~l-~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~dll~~ll~~~~~---  248 (428)
T 1cpt_A          183 LTQDFFGVHEP--DEQAVAAP-RQSADEAARRFHETIATFYDYFNGFTVDRRSC--------PKDDVMSLLANSKLD---  248 (428)
T ss_dssp             HHHTTTCC-------------------CHHHHHHHHHHHHHHHHHHHHHHHTTS--------CCSSHHHHHHHCBSS---
T ss_pred             HHHHHHhcccc--cccccccc-cccchhhHHHHHHHHHHHHHHHHHHHHHHHcC--------CCCcHHHHHHhcccc---
Confidence            21111100000  01122333 22211222456677788888899888887754        246999999987532   


Q ss_pred             ccCCCHHHHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhCCCCCChhhhccchhHHHHHHhhhccC
Q 039293          303 TQKISLDDLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARKEVLELLGQQNPSADNISRLKIVGMIINETLRLY  382 (512)
Q Consensus       303 ~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~  382 (512)
                      +..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++                 |++|||+|+||++
T Consensus       249 ~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~-----------------~l~a~i~E~lRl~  311 (428)
T 1cpt_A          249 GNYIDDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNPEQLALAKSDPA-----------------LIPRLVDEAVRWT  311 (428)
T ss_dssp             SSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG-----------------GHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHhHH-----------------HHHHHHHHHHHhC
Confidence            34699999999999999999999999999999999999999999999963                 8999999999999


Q ss_pred             CCCccccceeccccccCCeeeCCCCEEEEccchhccCCCCcCCCCCCCCCCCCCCCCCccccCCCccccccCCCcccccc
Q 039293          383 PPFVVFVREVKKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGEDFHLYKPERFAQGVPKATSNNMAAFLPFGLGPRTCVG  462 (512)
Q Consensus       383 p~~~~~~R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G  462 (512)
                      |+++.++|.+.+|++++||.||||+.|+++.+++||||++| +||++|+||||.+           .++|||.|+|.|+|
T Consensus       312 p~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~~-----------~~l~FG~G~r~C~G  379 (428)
T 1cpt_A          312 APVKSFMRTALADTEVRGQNIKRGDRIMLSYPSANRDEEVF-SNPDEFDITRFPN-----------RHLGFGWGAHMCLG  379 (428)
T ss_dssp             CCBCCCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTC-SSTTSCCTTCCSC-----------CCCTTCCSTTCCTT
T ss_pred             CcccccceeeCCCeeECCEEECCCCEEEeCHHHhCCChhhC-CChhhcCCCCCCC-----------CCCCCCCCCCCCCc
Confidence            99998899999999999999999999999999999999999 9999999999941           47999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhhcE-EEeCCCCccCCCcceeeecCCCceEEEEeC
Q 039293          463 FNFTIIEAKIALSMILRRYK-FTLSPNYVHSPVPRITLCPQHGIQVMLRAL  512 (512)
Q Consensus       463 ~~la~~~~~~~la~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  512 (512)
                      ++||++|++++++.|+++|+ +++.++...  ..........+++|+++||
T Consensus       380 ~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~--~~~~~~~~~~~lpv~~~p~  428 (428)
T 1cpt_A          380 QHLAKLEMKIFFEELLPKLKSVELSGPPRL--VATNFVGGPKNVPIRFTKA  428 (428)
T ss_dssp             HHHHHHHHHHHHHHHGGGEEEEEESSCCEE--CCCSSBCSEEECEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHhCCCceeCCCccc--ccCccccCcceeeEEeeCC
Confidence            99999999999999999998 888643222  2223344556799999886


No 33 
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1
Probab=100.00  E-value=2.5e-62  Score=474.79  Aligned_cols=364  Identities=14%  Similarity=0.204  Sum_probs=297.5

Q ss_pred             CchHHHHHHHHHhCCeEEEe----c-CC-eeEEEecCHHHHHHHH-hcCCCCCCCch---h--hhH-h-hhcCceeccCC
Q 039293           81 ITEPHIYSWIKLYGTNFLMW----H-GS-QAELVVAEPKLIKEIM-NNNRSFPKREP---R--EYL-K-LLGNGLVTTRG  146 (512)
Q Consensus        81 ~~~~~~~~~~~kyG~vf~~~----~-~~-~~~vvv~dpe~i~~i~-~~~~~~~~~~~---~--~~~-~-~~g~~l~~~~g  146 (512)
                      +++..+.+| ++||+||+++    + ++ .+.++++||+.+++++ .+. .+.+++.   .  ... . ..+.++++.+|
T Consensus        25 ~p~~~~~~l-~~yGpv~~~~~~~~~~~~~~~~vvv~~~~~i~~vl~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g  102 (406)
T 1ued_A           25 DPHEDNFGL-RAHGPLVRIVGESSTQLGRDFVWQAHGYEVVRRILGDHE-HFTTRPQFTQSKSGAHVEAQFVGQISTYDP  102 (406)
T ss_dssp             EECHHHHHH-HTTCSEEEEESHHHHHTTSSCEEEECSHHHHHHHHHCCS-SEECCCCC---------CGGGTTCGGGCCT
T ss_pred             CcHHHHHHH-HHhCCeeeecccccCCCCCccEEEEcCHHHHHHHHhhCc-cccccccccccccccccccccccccccCCC
Confidence            346788999 9999999999    7 78 8899999999999999 544 3433321   1  111 1 13457888899


Q ss_pred             chHHHHhhhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhcCCcccHHHHHHH-HhHhHhhhcccCccccccccHHHHHH
Q 039293          147 EKWLKKRKLAVNAFHAENLKNMIPDMIASVDMMLERWRDYEGKEIDAYREIKV-LTSEIISRTAFGSCYLEGENIFNMLT  225 (512)
Q Consensus       147 ~~w~~~Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~~~~vd~~~~~~~-~~~~~i~~~~fG~~~~~~~~~~~~~~  225 (512)
                      +.|+++|+++.+.|+...++.+.+.+.++++++++.|... ++++|+..++.. ++.++++. +||.+.++.+.+..   
T Consensus       103 ~~~~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~-g~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~~~~~~---  177 (406)
T 1ued_A          103 PEHTRLRKMLTPEFTVRRIRRMEPAIQSLIDDRLDLLEAE-GPSADLQGLFADPVGAHALCE-LLGIPRDDQREFVR---  177 (406)
T ss_dssp             THHHHHHHHHGGGSSHHHHHHHHHHHHHHHHHHHHHHHHH-CTTEEHHHHTHHHHHHHHHHH-HHTCCHHHHHHHHH---
T ss_pred             HHHHHHHHHhhhhhCHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeeHHHHHHHHhHHHHHHH-HcCCCHHHHHHHHH---
Confidence            9999999999999999999999999999999999999753 458999998875 99999994 79987542221111   


Q ss_pred             HHHHHHHHhhhhcccccccccccCcchhhhHHHHHHHHHHHHHHHHHHhhhhhcccccccCCcHHHHHHHhccccccccC
Q 039293          226 KMAYIVAKKKYKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKVVKKRESNVLTGEAESYGNDLLGILMRAYHSADETQK  305 (512)
Q Consensus       226 ~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~  305 (512)
                          ..... ..   ..       ...++..++.+.+.+++.+.+++++++        ...|+++.|++..     +..
T Consensus       178 ----~~~~~-~~---~~-------~~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~d~l~~ll~~~-----~~~  229 (406)
T 1ued_A          178 ----RIRRN-AD---LS-------RGLKARAADSAAFNRYLDNLLARQRAD--------PDDGLLGMIVRDH-----GDN  229 (406)
T ss_dssp             ----HHHHC-C-------------CCHHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHHHHH-----GGG
T ss_pred             ----HHHHH-Hh---cc-------CCHHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHHhc-----CCC
Confidence                11111 00   00       112456677888889999999887754        2479999999764     246


Q ss_pred             CCHHHHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhCCCCCChhhhccchhHHHHHHhhhccCCCC
Q 039293          306 ISLDDLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARKEVLELLGQQNPSADNISRLKIVGMIINETLRLYPPF  385 (512)
Q Consensus       306 l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~  385 (512)
                      ++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++                 |++|||+|+||++|++
T Consensus       230 ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~-----------------~l~a~i~E~lRl~p~~  292 (406)
T 1ued_A          230 VTDEELKGLCTALILGGVETVAGMIGFGVLALLDNPGQIELLFESPE-----------------KAERVVNELVRYLSPV  292 (406)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGTTHHHHCHH-----------------HHHHHHHHHHHHHCSS
T ss_pred             CCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhChHHHHHHHhCHH-----------------HHHHHHHHHHhcCCCc
Confidence            89999999999999999999999999999999999999999999863                 5899999999999999


Q ss_pred             cc-ccceeccccccCCeeeCCCCEEEEccchhccCCCCcCCCCCCCCCCCCCCCCCccccCCCccccccCCCcccccchH
Q 039293          386 VV-FVREVKKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGEDFHLYKPERFAQGVPKATSNNMAAFLPFGLGPRTCVGFN  464 (512)
Q Consensus       386 ~~-~~R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~  464 (512)
                      +. ++|.+.+|++++||.||||+.|+++.+++||||++| +||++|+||||-          . .++|||.|+|.|+|++
T Consensus       293 ~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dp~~F~PeR~~----------~-~~~pFG~G~r~C~G~~  360 (406)
T 1ued_A          293 QAPNPRLAIKDVVIDGQLIKAGDYVLCSILMANRDEALT-PDPDVLDANRAA----------V-SDVGFGHGIHYCVGAA  360 (406)
T ss_dssp             CSCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTSCC----------C-CCCTTCCSTTSCTTHH
T ss_pred             ccCcceecCCCEEECCEEECCCCEEEecHHHhcCCchhC-CChhhcCCCCCC----------C-CCCCCCCCCcCCCcHH
Confidence            96 699999999999999999999999999999999999 999999999981          2 6899999999999999


Q ss_pred             HHHHHHHHHHHHHHhhc-EEEeCCC-CccCCCcceeeecCCCceEEE
Q 039293          465 FTIIEAKIALSMILRRY-KFTLSPN-YVHSPVPRITLCPQHGIQVML  509 (512)
Q Consensus       465 la~~~~~~~la~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~v~~  509 (512)
                      ||++|++++++.|+++| ++++.++ .........+.++ .+++|++
T Consensus       361 lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~-~~lpv~~  406 (406)
T 1ued_A          361 LARSMLRMAYQTLWRRFPGLRLAVPIEEVKYRSAFVDCP-DQVPVTW  406 (406)
T ss_dssp             HHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCCSSSCCB-SCCEEEC
T ss_pred             HHHHHHHHHHHHHHHhCCCceecCCcccccccccccccC-CeeeeeC
Confidence            99999999999999999 7999743 2333344566678 8998875


No 34 
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Probab=100.00  E-value=1.1e-61  Score=471.05  Aligned_cols=365  Identities=17%  Similarity=0.213  Sum_probs=297.3

Q ss_pred             CCCCCCccCCCCHHHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCCeEEEecC-CeeEEEecCHHHHHHHHhc
Q 039293           43 IKGPSYKFFHGNNKEIINMKNEMIMSSSPMELSHQIFPITEPHIYSWIKLYGTNFLMWHG-SQAELVVAEPKLIKEIMNN  121 (512)
Q Consensus        43 ~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~vf~~~~~-~~~~vvv~dpe~i~~i~~~  121 (512)
                      +|||+++|++|++..                       +++..+.+|. +||+||+++++ +.+.++|++++.+++++.+
T Consensus         3 pPGp~~~P~~g~~~~-----------------------~p~~~~~~l~-~~Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~   58 (404)
T 1jfb_A            3 ASGAPSFPFSRASGP-----------------------EPPAEFAKLR-ATNPVSQVKLFDGSLAWLVTKHKDVCFVATS   58 (404)
T ss_dssp             ---CCBSSCCCSSTT-----------------------SCCTHHHHHH-HHCSEEEEECTTSCEEEEECSHHHHHHHHHC
T ss_pred             CCCCCCCCCCCCcCC-----------------------CccHHHHHHH-HhCCeeeeecCCCCceEEEecHHHHHHHHcC
Confidence            799999999999653                       2356778885 69999999874 5557788999999999987


Q ss_pred             CC--CCCCCc-hhhh-----Hhhhc-CceeccCCchHHHHhhhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhc--CCc
Q 039293          122 NR--SFPKRE-PREY-----LKLLG-NGLVTTRGEKWLKKRKLAVNAFHAENLKNMIPDMIASVDMMLERWRDYE--GKE  190 (512)
Q Consensus       122 ~~--~~~~~~-~~~~-----~~~~g-~~l~~~~g~~w~~~Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~--~~~  190 (512)
                      +.  .+..++ ....     ....| .++++.+|+.|+++||++.+.|+..+++++.+.++++++++++.|.+..  +++
T Consensus        59 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~l~~~~g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~  138 (404)
T 1jfb_A           59 EKLSKVRTRQGFPELSASGKQAAKAKPTFVDMDPPEHMHQRSMVEPTFTPEAVKNLQPYIQRTVDDLLEQMKQKGCANGP  138 (404)
T ss_dssp             TTEECCTTSTTCCCCSHHHHHHTTSCCCGGGCCTTHHHHHHTTTGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHCSTTSC
T ss_pred             CcccccccccCCccccccccchhcccCcccccCchhHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence            64  222111 1111     11233 5678889999999999999999999999999999999999999998653  247


Q ss_pred             ccHHHHHHHHhHhHhhhcccCccccccccHHHHHHHHHHHHHHhhhhcccccccccccCcchhhhHHHHHHHHHHHHHHH
Q 039293          191 IDAYREIKVLTSEIISRTAFGSCYLEGENIFNMLTKMAYIVAKKKYKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKVV  270 (512)
Q Consensus       191 vd~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i  270 (512)
                      +|+...+...+.++++..+||.+.++.+    .+......+.        .    +.+  ..+...++.+.+.+++.+.+
T Consensus       139 ~d~~~~~~~~~~~~i~~~~~G~~~~~~~----~~~~~~~~~~--------~----~~~--~~~~~~~~~~~~~~~~~~~i  200 (404)
T 1jfb_A          139 VDLVKEFALPVPSYIIYTLLGVPFNDLE----YLTQQNAIRT--------N----GSS--TAREASAANQELLDYLAILV  200 (404)
T ss_dssp             EEHHHHTTTHHHHHHHHHHHTCCGGGHH----HHHHHHHHHH--------C----TTS--CHHHHHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHcCCCHHHHH----HHHHHHHHHh--------c----cCc--chHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999998765321    1211111110        0    111  13455677788888999999


Q ss_pred             HHHhhhhhcccccccCCcHHHHHHHhccccccccCCCHHHHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHHH
Q 039293          271 KKRESNVLTGEAESYGNDLLGILMRAYHSADETQKISLDDLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARKE  350 (512)
Q Consensus       271 ~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~E  350 (512)
                      ++++++        ...|+++.++++..+   +..++++++.+++..+++||+|||+++++|++++|++||++|+|++++
T Consensus       201 ~~r~~~--------~~~d~l~~ll~~~~~---~~~l~~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~~  269 (404)
T 1jfb_A          201 EQRLVE--------PKDDIISKLCTEQVK---PGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKAN  269 (404)
T ss_dssp             HHHHHS--------CCSSHHHHHHHHTTT---TTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHC
T ss_pred             HHHHhC--------CCCcHHHHHHHhhcc---CCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHhC
Confidence            887754        247999999976432   346899999999999999999999999999999999999999999982


Q ss_pred             HHHHhCCCCCChhhhccchhHHHHHHhhhccCCCCc-cccceeccccccCCeeeCCCCEEEEccchhccCCCCcCCCCCC
Q 039293          351 VLELLGQQNPSADNISRLKIVGMIINETLRLYPPFV-VFVREVKKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGEDFHL  429 (512)
Q Consensus       351 i~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~-~~~R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~p~~  429 (512)
                                       .+|++|||+|+||++|+++ .++|.+.+|++++||.||||+.|+++.+++||||++| +||++
T Consensus       270 -----------------~~yl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~  331 (404)
T 1jfb_A          270 -----------------PSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVF-ENPDE  331 (404)
T ss_dssp             -----------------GGGHHHHHHHHHHHSCSCCSCCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTS
T ss_pred             -----------------hHhHHHHHHHHHhhCCCccccceeeeCCCeeECCEEECCCCEEEeCHHhhCCCchhC-CChhh
Confidence                             4799999999999999999 5699999999999999999999999999999999999 99999


Q ss_pred             CCCCCCCCCCCccccCCCccccccCCCcccccchHHHHHHHHHHHHHHHhhc-EEEeCC
Q 039293          430 YKPERFAQGVPKATSNNMAAFLPFGLGPRTCVGFNFTIIEAKIALSMILRRY-KFTLSP  487 (512)
Q Consensus       430 F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~la~ll~~f-~~~~~~  487 (512)
                      |+||||+++        . .++|||.|+|.|+|++||++|++++++.|+++| ++++.+
T Consensus       332 F~PeRf~~~--------~-~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~  381 (404)
T 1jfb_A          332 FNMNRKWPP--------Q-DPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAV  381 (404)
T ss_dssp             CCTTCCCCS--------S-CCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCTTCEESS
T ss_pred             cCCCCCCCC--------C-CCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHCCCceecC
Confidence            999999853        1 589999999999999999999999999999999 799864


No 35 
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B*
Probab=100.00  E-value=6.6e-62  Score=472.73  Aligned_cols=376  Identities=17%  Similarity=0.255  Sum_probs=305.2

Q ss_pred             ccCchHHHHHHHHHhCCeEEEecCCeeEEEecCHHHHHHHHhcCCCCCCCch-------hhhHhhhcCceeccCCchHHH
Q 039293           79 FPITEPHIYSWIKLYGTNFLMWHGSQAELVVAEPKLIKEIMNNNRSFPKREP-------REYLKLLGNGLVTTRGEKWLK  151 (512)
Q Consensus        79 ~~~~~~~~~~~~~kyG~vf~~~~~~~~~vvv~dpe~i~~i~~~~~~~~~~~~-------~~~~~~~g~~l~~~~g~~w~~  151 (512)
                      ..+++.++.++ ++||+||++++++.+.++++|++.+++++.++..|..+..       .......|.++++.+|+.|++
T Consensus        12 ~~~p~~~~~~~-r~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~h~~   90 (404)
T 3ejb_B           12 LKNPYSFYDTL-RAVHPIYKGSFLKYPGWYVTGYEETAAILKDARFKVRTPLPESSTKYQDLSHVQNQMMLFQNQPDHRR   90 (404)
T ss_dssp             HHCHHHHHHHH-HHHCSEEEEEETTEEEEEECCHHHHHHHHHCTTEECCCSSCTTCCTTHHHHHHHHTSGGGCCTTHHHH
T ss_pred             ccCchHHHHHH-HhhCCEeeccCCCCCEEEEecHHHHHHHHhCcccccCcccccccccccchhhhhhcchhhcCCchHHH
Confidence            34567778887 6899999999999999999999999999988765544332       123445678899999999999


Q ss_pred             HhhhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhcCCcccHHHHH-HHHhHhHhhhcccCccccccccHHHHHHHHHHH
Q 039293          152 KRKLAVNAFHAENLKNMIPDMIASVDMMLERWRDYEGKEIDAYREI-KVLTSEIISRTAFGSCYLEGENIFNMLTKMAYI  230 (512)
Q Consensus       152 ~Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~~~~vd~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~  230 (512)
                      +||++++.|+...++.+.+.+.+.++++++.|.+  ++.+|+...+ ..++.++++.+ ||.+.++.+.+.    .+...
T Consensus        91 ~Rr~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~--~~~~d~~~~~~~~~~~~vi~~~-~G~~~~~~~~~~----~~~~~  163 (404)
T 3ejb_B           91 LRTLASGAFTPRTTESYQPYIIETVHHLLDQVQG--KKKMEVISDFAFPLASFVIANI-IGVPEEDREQLK----EWAAS  163 (404)
T ss_dssp             HHHHHHGGGSHHHHHTTHHHHHHHHHHHHHTTTT--TSEEEHHHHTHHHHHHHHHHHH-HTCCGGGHHHHH----HHHHH
T ss_pred             HHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHhhh--cCCcchHHHHHHHHHHHHHHHH-cCCCHHHHHHHH----HHHHH
Confidence            9999999999999999999999999999999875  3689987665 45899999985 898765333222    22222


Q ss_pred             HHHhhhhcccccccccccCcchhhhHHHHHHHHHHHHHHHHHHhhhhhcccccccCCcHHHHHHHhccccccccCCCHHH
Q 039293          231 VAKKKYKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKVVKKRESNVLTGEAESYGNDLLGILMRAYHSADETQKISLDD  310 (512)
Q Consensus       231 ~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~  310 (512)
                      +...   ...|..     ....+...++.+.+.+++.+.+++++.+        ...|+++.++ ...+   +..+++++
T Consensus       164 ~~~~---~~~p~~-----~~~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~d~l~~ll-~~~~---~~~ls~~e  223 (404)
T 3ejb_B          164 LIQT---IDFTRS-----RKALTEGNIMAVQAMAYFKELIQKRKRH--------PQQDMISMLL-KGRE---KDKLTEEE  223 (404)
T ss_dssp             HHGG---GSTTCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHH-HC-------CCCHHH
T ss_pred             HHHh---ccCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHhC--------CcchHHHHHH-hccc---CCCCCHHH
Confidence            2111   111211     0123456677788888898988887754        3579999999 4322   45799999


Q ss_pred             HHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhCCCCCChhhhccchhHHHHHHhhhccCCCCccccc
Q 039293          311 LIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARKEVLELLGQQNPSADNISRLKIVGMIINETLRLYPPFVVFVR  390 (512)
Q Consensus       311 i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R  390 (512)
                      +..++..+++||+|||+++++|++++|++||++|+|+++|+                 .|++|||+|+||++|++++++|
T Consensus       224 l~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~-----------------~~l~a~i~E~lRl~p~~~~~~R  286 (404)
T 3ejb_B          224 AASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLRENP-----------------DLIGTAVEECLRYESPTQMTAR  286 (404)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCG-----------------GGHHHHHHHHHHHSCSBCEEEE
T ss_pred             HHHHHHHHHHcchHHHHHHHHHHHHHHHHCHHHHHHHHhCH-----------------HHHHHHHHHHHHhCCcccccce
Confidence            99999999999999999999999999999999999999985                 3799999999999999998899


Q ss_pred             eeccccccCCeeeCCCCEEEEccchhccCCCCcCCCCCCCCCCCCCCCCCccccCCCccccccCCCcccccchHHHHHHH
Q 039293          391 EVKKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGEDFHLYKPERFAQGVPKATSNNMAAFLPFGLGPRTCVGFNFTIIEA  470 (512)
Q Consensus       391 ~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~  470 (512)
                      .+.+|++++||.||||+.|+++.+++||||++| +||++|+||||-          . .++|||.|+|.|+|++||++|+
T Consensus       287 ~~~~d~~~~g~~ip~Gt~v~~~~~~~~rdp~~~-~dp~~F~p~R~~----------~-~~~~Fg~G~r~C~G~~lA~~e~  354 (404)
T 3ejb_B          287 VASEDIDICGVTIRQGEQVYLLLGAANRDPSIF-TNPDVFDITRSP----------N-PHLSFGHGHHVCLGSSLARLEA  354 (404)
T ss_dssp             EESSCEEETTEEECTTCEEEEEHHHHTTCTTTS-SSTTSCCTTCSS----------C-CCCTTCCSTTCCTTHHHHHHHH
T ss_pred             EeCCCeEECCEEECCCCEEEecHHHhCCChhhC-CCcceeCCCCCC----------C-CCCCCCCcCccCcCHHHHHHHH
Confidence            999999999999999999999999999999999 999999999982          1 5799999999999999999999


Q ss_pred             HHHHHHHHhhc-EEEeCCCCccCCCcceeeecCCCceEEEEeC
Q 039293          471 KIALSMILRRY-KFTLSPNYVHSPVPRITLCPQHGIQVMLRAL  512 (512)
Q Consensus       471 ~~~la~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  512 (512)
                      +++++.|+++| ++++.++ ...+..+...+...+++|++++|
T Consensus       355 ~~~l~~ll~~f~~~~l~~~-~~~~~~~~~~~~~~~lpv~~~~~  396 (404)
T 3ejb_B          355 QIAINTLLQRMPSLNLADF-EWRYRPLFGFRALEELPVTFEAS  396 (404)
T ss_dssp             HHHHHHHHHHCTTCEEC---CCCBCSCSSBCCBSCCEEECC--
T ss_pred             HHHHHHHHHhCcccccCCC-CceeccCcccCCcceeEEEEecc
Confidence            99999999999 9999854 23334455667888999999876


No 36 
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Probab=100.00  E-value=1.2e-61  Score=470.28  Aligned_cols=372  Identities=14%  Similarity=0.196  Sum_probs=307.4

Q ss_pred             cccCchHHHHHHHHHhCCeEEEecCCeeEEEecCHHHHHHHHhcCCCCCCCchhh--------hHhhhcCceeccCCchH
Q 039293           78 IFPITEPHIYSWIKLYGTNFLMWHGSQAELVVAEPKLIKEIMNNNRSFPKREPRE--------YLKLLGNGLVTTRGEKW  149 (512)
Q Consensus        78 ~~~~~~~~~~~~~~kyG~vf~~~~~~~~~vvv~dpe~i~~i~~~~~~~~~~~~~~--------~~~~~g~~l~~~~g~~w  149 (512)
                      +..+++.++.+| ++||+||++++++.+.++|+||+.+++++.++. |.+++...        .....+.++++.+|+.|
T Consensus        18 ~~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~-f~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~h   95 (411)
T 3a4g_A           18 FWQNPHPAYAAL-RAEDPVRKLALPDGPVWLLTRYADVREAFVDPR-LSKDWRHTLPEDQRADMPATPTPMMILMDPPDH   95 (411)
T ss_dssp             GTTCCHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHTCTT-EESCGGGGSCGGGCTTCCSCSSCCGGGCCTTHH
T ss_pred             hhcCchHHHHHH-HhcCCeeeccCCCCCEEEEecHHHHHHHHhCCC-cccccccccccccccccCcccccccccCCchHH
Confidence            334667889999 999999999999989999999999999998765 75544221        11124677888899999


Q ss_pred             HHHhhhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhcCCcccHHHHH-HHHhHhHhhhcccCccccccccHHHHHHHHH
Q 039293          150 LKKRKLAVNAFHAENLKNMIPDMIASVDMMLERWRDYEGKEIDAYREI-KVLTSEIISRTAFGSCYLEGENIFNMLTKMA  228 (512)
Q Consensus       150 ~~~Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~~~~vd~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~  228 (512)
                      +++|+++.+.|+..+++.+.+.+.+.++++++.|.+.  +++|+...+ ..++.++++.+ ||.+.++.+.+.    .+.
T Consensus        96 ~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~--~~vd~~~~~~~~~~~~vi~~~-~G~~~~~~~~~~----~~~  168 (411)
T 3a4g_A           96 TRLRKLVGRSFTVRRMNELEPRITEIADGLLAGLPTD--GPVDLMREYAFQIPVQVICEL-LGVPAEDRDDFS----AWS  168 (411)
T ss_dssp             HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHSCSS--SCEEHHHHTTTTHHHHHHHHH-HTCCGGGHHHHH----HHH
T ss_pred             HHHHHHhhhhhCHHHHHHHHHHHHHHHHHHHHHHHhc--CCccHHHHHHHHhHHHHHHHH-hCCCHHHHHHHH----HHH
Confidence            9999999999999999999999999999999999653  689998655 68999999975 998765322222    111


Q ss_pred             HHHHHhhhhcccccccccccCcchhhhHHHHHHHHHHHHHHHHHHhhhhhcccccccCCcHHHHHHHhccccccccCCCH
Q 039293          229 YIVAKKKYKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKVVKKRESNVLTGEAESYGNDLLGILMRAYHSADETQKISL  308 (512)
Q Consensus       229 ~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~  308 (512)
                      ..+.    .. .|          ..+..++.+.+.+++.+.+++++++        ...|+++.++++..++  +..+++
T Consensus       169 ~~~~----~~-~p----------~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~d~l~~ll~~~~~~--~~~ls~  223 (411)
T 3a4g_A          169 SVLV----DD-SP----------ADDKNAAMGKLHGYLSDLLERKRTE--------PDDALLSSLLAVSDED--GDRLSQ  223 (411)
T ss_dssp             HHHT----TS-SC----------TTTHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHHHCCCTT--CCCCCH
T ss_pred             HHHh----cc-CC----------HHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHHhhccC--CCCCCH
Confidence            1111    10 11          1245677788899999999888754        2469999999875422  456999


Q ss_pred             HHHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhCCCCCChhhhccchhHHHHHHhhhccCCCCc-c
Q 039293          309 DDLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARKEVLELLGQQNPSADNISRLKIVGMIINETLRLYPPFV-V  387 (512)
Q Consensus       309 ~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~-~  387 (512)
                      +++.+++..+++||+|||+++++|++++|++||++|+|+++|+                 .|++|||+|+||++|+++ +
T Consensus       224 ~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~-----------------~~l~a~i~E~lRl~p~~~~~  286 (411)
T 3a4g_A          224 EELVAMAMLLLIAGHETTVNLIGNGVLALLTHPDQRKLLAEDP-----------------SLISSAVEEFLRFDSPVSQA  286 (411)
T ss_dssp             HHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCG-----------------GGHHHHHHHHHHHTCSBCBC
T ss_pred             HHHHHHHHHHHHhchhhHHHHHHHHHHHHHhCHHHHHHHhcCH-----------------HHHHHHHHHHHHhcccccCC
Confidence            9999999999999999999999999999999999999999984                 389999999999999999 6


Q ss_pred             ccceeccccccCCeeeCCCCEEEEccchhccCCCCcCCCCCCCCCCCCCCCCCccccCCCccccccCCCcccccchHHHH
Q 039293          388 FVREVKKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGEDFHLYKPERFAQGVPKATSNNMAAFLPFGLGPRTCVGFNFTI  467 (512)
Q Consensus       388 ~~R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~  467 (512)
                      ++|.+.+|++++||.||||+.|+++.+++||||++| +||++|+||||.          . .++|||.|+|.|+|++||+
T Consensus       287 ~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~----------~-~~l~FG~G~r~C~G~~lA~  354 (411)
T 3a4g_A          287 PIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWM-PEPDRLDITRDA----------S-GGVFFGHGIHFCLGAQLAR  354 (411)
T ss_dssp             CCEEESSCEEETTEEECTTCEEEEBHHHHTTCTTTS-SSTTSCCTTSCC----------T-TCCTTCCSTTCCTTHHHHH
T ss_pred             ceeEeCCCEEECCEEECCCCEEEeChhhhCCChhhc-CCccccCCCCCC----------C-CCCCCCCCCccCCCHHHHH
Confidence            799999999999999999999999999999999999 999999999983          1 6899999999999999999


Q ss_pred             HHHHHHHHHHHhhc-EEEeCCCC-ccCCCcceeeecCCCceEEEEeC
Q 039293          468 IEAKIALSMILRRY-KFTLSPNY-VHSPVPRITLCPQHGIQVMLRAL  512 (512)
Q Consensus       468 ~~~~~~la~ll~~f-~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~r  512 (512)
                      +|++++++.|+++| ++++.++. ...+....+.++..+++|++.+|
T Consensus       355 ~e~~~~la~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~~~r  401 (411)
T 3a4g_A          355 LEGRVAIGRLFADRPELALAVGLDELVYRESTLVRGLSRMPVTMGPR  401 (411)
T ss_dssp             HHHHHHHHHHHHHCTTCEESSCGGGCCBCCCTTBCCBSCCEEECCCC
T ss_pred             HHHHHHHHHHHHhCCCcEECCCccccccccCccccCcceeEEEecCc
Confidence            99999999999999 69997532 22233345567788999999876


No 37 
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Probab=100.00  E-value=3.4e-61  Score=466.91  Aligned_cols=379  Identities=18%  Similarity=0.241  Sum_probs=311.8

Q ss_pred             CCcccccccccCchHHHHHHHHHhCCeEEEecCCeeEEEecCHHHHHHHHhcCCCCCCCchh-------------hh-Hh
Q 039293           70 SPMELSHQIFPITEPHIYSWIKLYGTNFLMWHGSQAELVVAEPKLIKEIMNNNRSFPKREPR-------------EY-LK  135 (512)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~kyG~vf~~~~~~~~~vvv~dpe~i~~i~~~~~~~~~~~~~-------------~~-~~  135 (512)
                      +|..+...+..+++.++.+| ++||+||++++++.+.++++||+.+++++.++ .|.+++..             .. ..
T Consensus         4 ~~~~~~~~~~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~   81 (404)
T 1z8o_A            4 VPDLESDSFHVDWYRTYAEL-RETAPVTPVRFLGQDAWLVTGYDEAKAALSDL-RLSSDPKKKYPGVEVEFPAYLGFPED   81 (404)
T ss_dssp             CCBTTSGGGTSSHHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHHCT-TEECCTTCCCTTCCCCCGGGTTCCHH
T ss_pred             CCCCCCcccccCcHHHHHHH-HhcCCeeeecCCCceEEEEcCHHHHHHHHcCC-Cccccccccccccccccccccccccc
Confidence            33333344556778889999 99999999999999999999999999999876 45443321             11 22


Q ss_pred             ---hhcCceeccCCchHHHHhhhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhcCCcccHHHHH-HHHhHhHhhhcccC
Q 039293          136 ---LLGNGLVTTRGEKWLKKRKLAVNAFHAENLKNMIPDMIASVDMMLERWRDYEGKEIDAYREI-KVLTSEIISRTAFG  211 (512)
Q Consensus       136 ---~~g~~l~~~~g~~w~~~Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~~~~vd~~~~~-~~~~~~~i~~~~fG  211 (512)
                         ..+.++++.+|+.|+++|+++.+.|+...++.+.+.+.+.++++++.|.+  ++++|+...+ ..++.++++.+ ||
T Consensus        82 ~~~~~~~~l~~~~g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~--~~~~d~~~~~~~~~~~~vi~~~-~G  158 (404)
T 1z8o_A           82 VRNYFATNMGTSDPPTHTRLRKLVSQEFTVRRVEAMRPRVEQITAELLDEVGD--SGVVDIVDRFAHPLPIKVICEL-LG  158 (404)
T ss_dssp             HHHHHSSSGGGCCTTHHHHHHHHHHTTSCHHHHHHTHHHHHHHHHHHHHTSCS--SSEEEHHHHTTTHHHHHHHHHH-TT
T ss_pred             hhhhcccccccCCCcHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhhhh--cCCcchHHHHhHHHHHHHHHHH-hC
Confidence               25778888999999999999999999999999999999999999999864  4689999766 68999999985 99


Q ss_pred             ccccccccHHHHHHHHHHHHHHhhhhcccccccccccCcchhhhHHHHHHHHHHHHHHHHHHhhhhhcccccccCCcHHH
Q 039293          212 SCYLEGENIFNMLTKMAYIVAKKKYKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKVVKKRESNVLTGEAESYGNDLLG  291 (512)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~d~l~  291 (512)
                      .+.++.+.+......+.    .     ..|      |.  .++..++...+.+++.+.+++++++        ...|+++
T Consensus       159 ~~~~~~~~~~~~~~~~~----~-----~~~------p~--~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~dll~  213 (404)
T 1z8o_A          159 VDEKYRGEFGRWSSEIL----V-----MDP------ER--AEQRGQAAREVVNFILDLVERRRTE--------PGDDLLS  213 (404)
T ss_dssp             CCGGGTTTHHHHHHHHH----C-----CCG------GG--HHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHH
T ss_pred             CCHHHHHHHHHHHHHHh----c-----cCC------hh--HHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHH
Confidence            88765444433322211    1     011      11  3456677788888999999887754        2469999


Q ss_pred             HHHHh-ccccccccCCCHHHHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhCCCCCChhhhccchh
Q 039293          292 ILMRA-YHSADETQKISLDDLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARKEVLELLGQQNPSADNISRLKI  370 (512)
Q Consensus       292 ~ll~~-~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~l~~  370 (512)
                      .+++. .. +  +..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|+                 .|
T Consensus       214 ~ll~~~~~-~--~~~l~~~ei~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~-----------------~~  273 (404)
T 1z8o_A          214 ALIRVQDD-D--DGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLALVRRDP-----------------SA  273 (404)
T ss_dssp             HHHHCEET-T--TEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCG-----------------GG
T ss_pred             HHHhhhcc-c--CCCCCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHCHHHHHHHHhCH-----------------Hh
Confidence            99976 33 2  3468999999999999999999999999999999999999999999984                 37


Q ss_pred             HHHHHHhhhccCCCCccccceeccccccCCeeeCCCCEEEEccchhccCCCCcCCCCCCCCCCCCCCCCCccccCCCccc
Q 039293          371 VGMIINETLRLYPPFVVFVREVKKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGEDFHLYKPERFAQGVPKATSNNMAAF  450 (512)
Q Consensus       371 l~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~  450 (512)
                      ++|||+|+||++|+++.++|.+.+|++++||.||||+.|+++.+++||||++| +||++|+||||.          . .+
T Consensus       274 l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rd~~~~-~dP~~F~PeR~~----------~-~~  341 (404)
T 1z8o_A          274 LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQF-PDPHRFDVTRDT----------R-GH  341 (404)
T ss_dssp             HHHHHHHHHHHTCSSCCEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTSCC----------T-TC
T ss_pred             HHHHHHHHHHhcCCccCcceEECCCEEECCEEECCCCEEEecchhhcCCcccC-CChhhcCCCCCC----------C-Cc
Confidence            99999999999999997799999999999999999999999999999999999 999999999983          1 68


Q ss_pred             cccCCCcccccchHHHHHHHHHHHHHHHhhc-EEEeCCC-CccCCCcceeeecCCCceEEEE
Q 039293          451 LPFGLGPRTCVGFNFTIIEAKIALSMILRRY-KFTLSPN-YVHSPVPRITLCPQHGIQVMLR  510 (512)
Q Consensus       451 ~~Fg~G~r~C~G~~la~~~~~~~la~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~  510 (512)
                      +|||.|+|.|+|++||++|++++++.|+++| ++++.++ .......+.+.++..+++|++.
T Consensus       342 ~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~l~v~~~  403 (404)
T 1z8o_A          342 LSFGQGIHFCMGRPLAKLEGEVALRALFGRFPALSLGIDADDVVWRRSLLLRGIDHLPVRLD  403 (404)
T ss_dssp             CTTCSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCCCCCSSSCCCSCCEEETT
T ss_pred             cCCCCCCccCCcHHHHHHHHHHHHHHHHHhCCCcEecCCCCcceeccccccCCcceeEEEeC
Confidence            9999999999999999999999999999999 4999753 2233334556678888998863


No 38 
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Probab=100.00  E-value=2.4e-62  Score=475.36  Aligned_cols=389  Identities=13%  Similarity=0.108  Sum_probs=316.3

Q ss_pred             CCCCCCCCccCC--CCHHHHHHHHHhhhhcCCCcccccc-cccCchHHHHHHHHHhC--CeEEEe-cCCeeEEEecCHHH
Q 039293           41 QGIKGPSYKFFH--GNNKEIINMKNEMIMSSSPMELSHQ-IFPITEPHIYSWIKLYG--TNFLMW-HGSQAELVVAEPKL  114 (512)
Q Consensus        41 ~~~Pgp~~~p~~--G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~kyG--~vf~~~-~~~~~~vvv~dpe~  114 (512)
                      +.+|||.+.|..  +.+. +.          +     .. +..+++.++.+|+ +||  +||+++ +|  +.++++|++.
T Consensus        11 ~~~~~p~~~p~~~~~~~~-~~----------~-----~~~~~~~p~~~~~~l~-~~G~~pv~~~~~~g--~~vvv~~~~~   71 (415)
T 2zwu_A           11 NLAPLPPHVPEHLVFDFD-MY----------N-----PSNLSAGVQEAWAVLQ-ESNVPDLVWTRCNG--GHWIATRGQL   71 (415)
T ss_dssp             CCCCCCTTSCGGGBCCCC-TT----------S-----CTTGGGCHHHHHHGGG-STTSCSEEEECGGG--CEEEECSHHH
T ss_pred             ccCCCCCCCCcccccccC-cC----------C-----hhhcccChHHHHHHHH-hcCCCCeEEecCCC--CeEEEcCHHH
Confidence            357899988864  4421 10          1     11 3456778888895 799  999999 55  5899999999


Q ss_pred             HHHHHhcCCCCCCCc-hhh-hHhhhcCc-eeccCCchHHHHhhhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhcCCcc
Q 039293          115 IKEIMNNNRSFPKRE-PRE-YLKLLGNG-LVTTRGEKWLKKRKLAVNAFHAENLKNMIPDMIASVDMMLERWRDYEGKEI  191 (512)
Q Consensus       115 i~~i~~~~~~~~~~~-~~~-~~~~~g~~-l~~~~g~~w~~~Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~~~~v  191 (512)
                      +++++.+...|.+++ ... ....++.+ +++.+|+.|+++|+++.+.|+...++.+.+.+.++++++++.|.+.  +++
T Consensus        72 v~~vl~~~~~f~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~--~~~  149 (415)
T 2zwu_A           72 IREAYEDYRHFSSECPFIPREAGEAYDFIPTSMDPPEQRQFRALANQVVGMPVVDKLENRIQELACSLIESLRPQ--GQC  149 (415)
T ss_dssp             HHHHHHCTTTEETTSCSSSHHHHHHCCCTTTTCCTTTTHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHGGG--TEE
T ss_pred             HHHHHcCccccCCCcccCCCCccccccccCccCCCcHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHHHHHHHHhc--CCc
Confidence            999998655676654 222 22334677 8888999999999999999999999999999999999999999764  589


Q ss_pred             cHHHHH-HHHhHhHhhhcccCccccccccHHHHHHHHHHHHHHhhhhcccccccccccCcchhhhHHHHHHHHHHHHHHH
Q 039293          192 DAYREI-KVLTSEIISRTAFGSCYLEGENIFNMLTKMAYIVAKKKYKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKVV  270 (512)
Q Consensus       192 d~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i  270 (512)
                      |+..++ ..++.++++.+ ||.+.++.+.+.+.    ...+..    ...|       .    +..++.+.+.+++.+.+
T Consensus       150 d~~~~~~~~~~~~vi~~~-~G~~~~~~~~~~~~----~~~~~~----~~~P-------~----~~~~~~~~~~~~~~~~i  209 (415)
T 2zwu_A          150 NFTEDYAEPFPIRIFMLL-AGLPEEDIPHLKYL----TDQMTR----PDGS-------M----TFAEAKEALYDYLIPII  209 (415)
T ss_dssp             EHHHHTTTHHHHHHHHHH-HTCCGGGHHHHHHH----HHHHHS----CCSS-------S----CHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHH----HHHHHh----ccCH-------H----HHHHHHHHHHHHHHHHH
Confidence            999875 78999999999 99987643322222    111111    1112       1    45677788889999999


Q ss_pred             HHHhhhhhcccccccCCcHHHHHHHhccccccccCCCHHHHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHHH
Q 039293          271 KKRESNVLTGEAESYGNDLLGILMRAYHSADETQKISLDDLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARKE  350 (512)
Q Consensus       271 ~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~E  350 (512)
                      ++++++        ...|+++.|++...+   +..++++++..++..+++||+|||+++++|++++|++||++|+|+++|
T Consensus       210 ~~r~~~--------~~~dll~~ll~~~~~---~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E  278 (415)
T 2zwu_A          210 EQRRQK--------PGTDAISIVANGQVN---GRPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIER  278 (415)
T ss_dssp             HHHHHS--------CCSSHHHHHHTCEET---TEECCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHCHHHHHHHHHC
T ss_pred             HHHHhC--------CCCCHHHHHHHhhhc---CCCCCHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHhCHHHHHHHHhC
Confidence            888764        347999999976432   346899999999999999999999999999999999999999999999


Q ss_pred             HHHHhCCCCCChhhhccchhHHHHHHhhhccCCCCccccceeccccccCCeeeCCCCEEEEccchhccCCCCcCCCCCCC
Q 039293          351 VLELLGQQNPSADNISRLKIVGMIINETLRLYPPFVVFVREVKKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGEDFHLY  430 (512)
Q Consensus       351 i~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~p~~F  430 (512)
                      ++                 |++|||+|+||++|+++++ |.+.+|++++||.||||+.|+++.+++||||++| +||++|
T Consensus       279 ~~-----------------~l~a~i~E~lRl~p~~~~~-R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F  339 (415)
T 2zwu_A          279 PE-----------------RIPAACEELLRRFSLVADG-RILTSDYEFHGVQLKKGDQILLPQMLSGLDEREN-ACPMHV  339 (415)
T ss_dssp             GG-----------------GHHHHHHHHHHHTCCBCCE-EEESSCEEETTEEECTTCEEECCHHHHHHCTTTS-SSTTSC
T ss_pred             HH-----------------HHHHHHHHHHhhcCCcCCc-eeeCCCEEECCEEECCCCEEEeCchhhCCCchhC-CCcccc
Confidence            52                 8999999999999999999 9999999999999999999999999999999999 999999


Q ss_pred             CCCCCCCCCCccccCCCccccccCCCcccccchHHHHHHHHHHHHHHHhhcE-EEeCCCCccCCCcceeeecCCCceEEE
Q 039293          431 KPERFAQGVPKATSNNMAAFLPFGLGPRTCVGFNFTIIEAKIALSMILRRYK-FTLSPNYVHSPVPRITLCPQHGIQVML  509 (512)
Q Consensus       431 ~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~la~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~v~~  509 (512)
                      +||||-          . .++|||.|+|.|+|++||++|++++++.|+++|+ +++.++.... ....+..+..+++|++
T Consensus       340 ~PeR~~----------~-~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~-~~~~~~~~~~~lpv~~  407 (415)
T 2zwu_A          340 DFSRQK----------V-SHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQ-HKSGIVSGVQALPLVW  407 (415)
T ss_dssp             CTTCSS----------C-CCCTTCCGGGCCSSHHHHHHHHHHHHHHHHHHCCSCEECTTCCCC-EECSSBCEESCCEEEC
T ss_pred             CCCCCC----------C-CCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCCCEECCCcccc-cCCccccCcceeEEEE
Confidence            999951          2 6899999999999999999999999999999998 9997632210 2334556777899999


Q ss_pred             EeC
Q 039293          510 RAL  512 (512)
Q Consensus       510 ~~r  512 (512)
                      ++|
T Consensus       408 ~~r  410 (415)
T 2zwu_A          408 DPA  410 (415)
T ss_dssp             CGG
T ss_pred             ecC
Confidence            876


No 39 
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00  E-value=7e-62  Score=472.17  Aligned_cols=372  Identities=18%  Similarity=0.236  Sum_probs=305.1

Q ss_pred             CchHHHHHHHHHhCCeEEEec-CCeeEEEecCHHHHHHHHhcCCCCCCCc--hhhhH--------hh----h-cCceecc
Q 039293           81 ITEPHIYSWIKLYGTNFLMWH-GSQAELVVAEPKLIKEIMNNNRSFPKRE--PREYL--------KL----L-GNGLVTT  144 (512)
Q Consensus        81 ~~~~~~~~~~~kyG~vf~~~~-~~~~~vvv~dpe~i~~i~~~~~~~~~~~--~~~~~--------~~----~-g~~l~~~  144 (512)
                      +++..+.++ ++||+||++++ |+.+.++++||+++++++.++. +.++.  .....        .+    . +.++++.
T Consensus        18 ~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   95 (411)
T 1gwi_A           18 DLDGESARL-RAAGPLAAVELPGGVPVWAVTHHAEAKALLTDPR-LVKDINVWGAWRRGEIPADWPLIGLANPGRSMLTV   95 (411)
T ss_dssp             CHHHHHHHH-HHTCSEEEEEETTTEEEEEECSHHHHHHHHTCTT-EECCGGGCHHHHTTCSCTTCTTHHHHSCCSSGGGC
T ss_pred             ChHHHHHHH-HHhCCeeeeecCCCccEEEEeCHHHHHHHHcCCc-cccCcccccccccccCCcccchhhhhccccccccC
Confidence            456678888 99999999997 8889999999999999998764 33332  11010        01    2 5678888


Q ss_pred             CCchHHHHhhhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhcCCcccHHHHHH-HHhHhHhhhcccCccccccccHHHH
Q 039293          145 RGEKWLKKRKLAVNAFHAENLKNMIPDMIASVDMMLERWRDYEGKEIDAYREIK-VLTSEIISRTAFGSCYLEGENIFNM  223 (512)
Q Consensus       145 ~g~~w~~~Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~~~~vd~~~~~~-~~~~~~i~~~~fG~~~~~~~~~~~~  223 (512)
                      +|+.|+++|+++.+.|+...++.+.+.+.+.++++++.|.+ .++++|+..++. .++.++++. +||.+.++.+.+...
T Consensus        96 ~g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~-~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~~~~~~~  173 (411)
T 1gwi_A           96 DGAEHRRLRTLVAQALTVRRVEHMRGRITELTDRLLDELPA-DGGVVDLKAAFAYPLPMYVVAD-LMGIEEARLPRLKVL  173 (411)
T ss_dssp             CHHHHHHHHHHHTTTSCHHHHHTTHHHHHHHHHHHHHTSCC-SCCCEEHHHHTTTHHHHHHHHH-HHTCCGGGHHHHHHH
T ss_pred             CcHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH-cCCCcchHHHHhhHHHHHHHHH-HhCCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999863 246899998886 599999996 699876532222222


Q ss_pred             HHHHHHHHHHhhhhcccccccccccCcchhhhHHHHHHHHHHHHHHHHHHhhhhhcccccccCCcHHHHHHHhccccccc
Q 039293          224 LTKMAYIVAKKKYKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKVVKKRESNVLTGEAESYGNDLLGILMRAYHSADET  303 (512)
Q Consensus       224 ~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~  303 (512)
                      .    ..+..   .    .       ...++..++.+.+.+++.+.+++++++        ...|+++.++++..+   +
T Consensus       174 ~----~~~~~---~----~-------~~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~d~l~~ll~~~~~---~  224 (411)
T 1gwi_A          174 F----EKFFS---T----Q-------TPPEEVVATLTELASIMTDTVAAKRAA--------PGDDLTSALIQASEN---G  224 (411)
T ss_dssp             H----HHHHC---T----T-------SCHHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHHHCCBT---T
T ss_pred             H----HHHhc---c----C-------CChHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHHhccc---C
Confidence            1    11111   0    0       112456677788888999999887754        247999999987532   4


Q ss_pred             cCCCHHHHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhCCCCCChhhhccchhHHHHHHhhhccCC
Q 039293          304 QKISLDDLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARKEVLELLGQQNPSADNISRLKIVGMIINETLRLYP  383 (512)
Q Consensus       304 ~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p  383 (512)
                      ..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|+                 +|++|||+|+||++|
T Consensus       225 ~~l~~~~i~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~-----------------~~l~a~i~E~lRl~p  287 (411)
T 1gwi_A          225 DHLTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHPEQRALVLSGE-----------------AEWSAVVEETLRFST  287 (411)
T ss_dssp             BCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTS-----------------SCHHHHHHHHHHHSC
T ss_pred             CCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhChHHHHHHHcCh-----------------HHHHHHHHHHHHhCC
Confidence            569999999999999999999999999999999999999999999873                 479999999999999


Q ss_pred             CCcc-ccceeccccccCCeeeCCCCEEEEccchhccCCCCcCCCCCCCCCCCCCCCCCccccCCCccccccCCCcccccc
Q 039293          384 PFVV-FVREVKKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGEDFHLYKPERFAQGVPKATSNNMAAFLPFGLGPRTCVG  462 (512)
Q Consensus       384 ~~~~-~~R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G  462 (512)
                      +++. ++|.+.+|++++||.||||+.|+++.+++||||++||+||++|+||||.+         . .++|||.|+|.|+|
T Consensus       288 ~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeRf~~---------~-~~lpFG~G~r~C~G  357 (411)
T 1gwi_A          288 PTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRDERAHGPTADRFDLTRTSG---------N-RHISFGHGPHVCPG  357 (411)
T ss_dssp             SBCCEEEEEESSCEEETTEEECTTCEEEECHHHHTTCHHHHCGGGGSCCTTCCCS---------S-CCCTTCCSTTCCTT
T ss_pred             cccCCceeeeCCCeEECCEEECCCCEEEecHHHhcCChhhcCCChhhcCCCCCCC---------C-CcccCCCCcccCCC
Confidence            9986 69999999999999999999999999999999999999999999999953         2 68999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhhc-EEEeCCC-CccCCCcceeeecCCCceEEEEeC
Q 039293          463 FNFTIIEAKIALSMILRRY-KFTLSPN-YVHSPVPRITLCPQHGIQVMLRAL  512 (512)
Q Consensus       463 ~~la~~~~~~~la~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~r  512 (512)
                      ++||++|++++++.|+++| ++++.++ .........+.++..+++|++++|
T Consensus       358 ~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~lpv~~~~r  409 (411)
T 1gwi_A          358 AALSRMEAGVALPALYARFPHLDLAVPAAELRNKPVVTQNDLFELPVRLAHH  409 (411)
T ss_dssp             HHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCSCTTBCCBSCCEEESSCC
T ss_pred             HHHHHHHHHHHHHHHHHhCccceeCCCcccccccccccccCcceeEEEecCC
Confidence            9999999999999999999 7998643 222233345567888999999887


No 40 
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A*
Probab=100.00  E-value=2.9e-61  Score=466.89  Aligned_cols=371  Identities=18%  Similarity=0.255  Sum_probs=305.9

Q ss_pred             cCchHHHHHHHHHhCCeEEEec-CCeeEEEecCHHHHHHHHhcCCCCCCCc---hhh----hHh-hhcCceeccCCchHH
Q 039293           80 PITEPHIYSWIKLYGTNFLMWH-GSQAELVVAEPKLIKEIMNNNRSFPKRE---PRE----YLK-LLGNGLVTTRGEKWL  150 (512)
Q Consensus        80 ~~~~~~~~~~~~kyG~vf~~~~-~~~~~vvv~dpe~i~~i~~~~~~~~~~~---~~~----~~~-~~g~~l~~~~g~~w~  150 (512)
                      .+++.++.+| ++||+||++++ |+.+.++++|++.+++++.++. |.++.   .+.    ... ..+.++++.+|+.|+
T Consensus        19 ~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~-f~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~h~   96 (403)
T 3aba_A           19 FLPPDGIADI-RAAAPVTRATFTSGHEAWLVTGYEEVRALLRDSS-FSVQVPHALHTQDGVVTQKPGRGSLLWQDEPEHT   96 (403)
T ss_dssp             TSCCTTHHHH-HHHCSEEEEECTTSCEEEEECCHHHHHHHHHCTT-EESCCSCCTTSSSCCCCCCCCTTCCTTCCTTHHH
T ss_pred             cChhHHHHHH-HhcCCeeeeccCCCceEEEEcCHHHHHHHHcCCC-cccccccccccccccccccccccccccCCchhHH
Confidence            3556778899 89999999997 8899999999999999998753 54432   101    112 246778888999999


Q ss_pred             HHhhhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhcCCcccHHHHH-HHHhHhHhhhcccCccccccccHHHHHHHHHH
Q 039293          151 KKRKLAVNAFHAENLKNMIPDMIASVDMMLERWRDYEGKEIDAYREI-KVLTSEIISRTAFGSCYLEGENIFNMLTKMAY  229 (512)
Q Consensus       151 ~~Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~~~~vd~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~  229 (512)
                      ++|+++.+.|+...++++.+.+.+.++++++.|.+ .++++|+..++ ..++.++++. +||.+.++.+.    +..+..
T Consensus        97 ~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~-~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~~~----~~~~~~  170 (403)
T 3aba_A           97 SDRKLLAKEFTVRRMQALRPNIQRIVDEHLDAIEA-RGGPVDLVKTFANAVPSMVISD-LFGVPVERRAE----FQDIAE  170 (403)
T ss_dssp             HHHHHHHHHSCHHHHHTTHHHHHHHHHHHHHHHHH-HCSCEEHHHHTTTHHHHHHHHH-HHTCCGGGHHH----HHHHHH
T ss_pred             HHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCccHHHHHHHHHHHHHHHH-HcCCCHHHHHH----HHHHHH
Confidence            99999999999999999999999999999999975 34689999776 4799999998 69987653222    211111


Q ss_pred             HHHHhhhhcccccccccccCcchhhhHHHHHHHHHHHHHHHHHHhhhhhcccccccCCcHHHHHHHhccccccccCCCHH
Q 039293          230 IVAKKKYKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKVVKKRESNVLTGEAESYGNDLLGILMRAYHSADETQKISLD  309 (512)
Q Consensus       230 ~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~  309 (512)
                      .+    .....       +   .++..++.+.+.+++.+.+++++++        ...|+++.|+++..+   +..++++
T Consensus       171 ~~----~~~~~-------~---p~~~~~~~~~~~~~~~~~i~~r~~~--------~~~dll~~ll~~~~~---~~~l~~~  225 (403)
T 3aba_A          171 AM----MRVDQ-------D---AAATEAAGMRLGGLLYQLVQERRAN--------PGDDLISALITTEDP---DGVVDDM  225 (403)
T ss_dssp             HH----SBSSS-------C---HHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHHTSCCT---TCCCSHH
T ss_pred             HH----HhccC-------c---HHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHhhccC---CCCCCHH
Confidence            11    11000       0   1456677788889999999887754        246999999976432   4579999


Q ss_pred             HHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhCCCCCChhhhccchhHHHHHHhhhccCCCCc-cc
Q 039293          310 DLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARKEVLELLGQQNPSADNISRLKIVGMIINETLRLYPPFV-VF  388 (512)
Q Consensus       310 ~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~-~~  388 (512)
                      ++.+++.++++||+|||+++++|++++|++||++|+|+++|+                 .|++|||+|+||++|+++ .+
T Consensus       226 ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~-----------------~~l~a~i~E~lRl~p~~~~~~  288 (403)
T 3aba_A          226 FLMNAAGTLLIAAHDTTACMIGLGTALLLDSPDQLALLREDP-----------------SLVGNAVEELLRYLTIGQFGG  288 (403)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCG-----------------GGHHHHHHHHHHHHCSCTTCE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHhCH-----------------HHHHHHHHHHHhcCCCccccc
Confidence            999999999999999999999999999999999999999984                 379999999999999999 67


Q ss_pred             cceeccccccCCeeeCCCCEEEEccchhccCCCCcCCCCCCCCCCCCCCCCCccccCCCccccccCCCcccccchHHHHH
Q 039293          389 VREVKKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGEDFHLYKPERFAQGVPKATSNNMAAFLPFGLGPRTCVGFNFTII  468 (512)
Q Consensus       389 ~R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~  468 (512)
                      +|.+.+|++++||.||||+.|+++.+++||||++| +||++|+||||.          . .++|||+|+|.|+|++||++
T Consensus       289 ~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~-~dp~~F~PeR~~----------~-~~l~FG~G~r~C~G~~lA~~  356 (403)
T 3aba_A          289 ERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFV-EEPERFDITRRP----------A-PHLAFGFGAHQCIGQQLARI  356 (403)
T ss_dssp             EEEESSCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTSCC----------C-CCSTTCCGGGSCTTHHHHHH
T ss_pred             ceEeCCCeEECCEEECCCCEEEechhhhCCChhhC-CCccccCCCCCC----------C-CccCCCCCCccCcCHHHHHH
Confidence            99999999999999999999999999999999999 999999999983          1 68999999999999999999


Q ss_pred             HHHHHHHHHHhhc-EEEeCCC-CccCCCcceeeecCCCceEEEEeC
Q 039293          469 EAKIALSMILRRY-KFTLSPN-YVHSPVPRITLCPQHGIQVMLRAL  512 (512)
Q Consensus       469 ~~~~~la~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~r  512 (512)
                      |++++++.|+++| ++++.++ .......+.+.++..+++|++++|
T Consensus       357 e~~~~la~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~~~r  402 (403)
T 3aba_A          357 ELQIVFETLFRRLPGLRLAKPVEELRFRHDMVFYGVHELPVTWHHH  402 (403)
T ss_dssp             HHHHHHHHHHHHSTTCEESSCGGGSCBCTTBSSCCBSCCEEECCCC
T ss_pred             HHHHHHHHHHHhCCCceecCCccccccccCcccCCcceeEEEecCC
Confidence            9999999999999 5998754 222233445667889999999887


No 41 
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora}
Probab=100.00  E-value=1.3e-61  Score=469.02  Aligned_cols=371  Identities=17%  Similarity=0.219  Sum_probs=302.9

Q ss_pred             cCchHHHHHHHHHhCCeEEEecCCeeEEEecCHHHHHHHHhcCCCCCCCchhh----------hHhhhcCceeccCCchH
Q 039293           80 PITEPHIYSWIKLYGTNFLMWHGSQAELVVAEPKLIKEIMNNNRSFPKREPRE----------YLKLLGNGLVTTRGEKW  149 (512)
Q Consensus        80 ~~~~~~~~~~~~kyG~vf~~~~~~~~~vvv~dpe~i~~i~~~~~~~~~~~~~~----------~~~~~g~~l~~~~g~~w  149 (512)
                      .+++.++..+ ++||+||+ +  +.+.++|+||+.+++++.++ .|.++....          ...+++.++++.+|+.|
T Consensus        13 ~~p~~~~~~l-~~yGpv~~-~--g~~~~vv~~~~~v~~vl~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~h   87 (397)
T 3buj_A           13 RDPYPSYHWL-LRHDPVHR-G--AHRVWYVSRFADVRAVLGDE-RFARTGIRRFWTDLVGPGLLAEIVGDIILFQDEPDH   87 (397)
T ss_dssp             HCCHHHHHHH-HHHCSEEE-C--GGGCEEECSHHHHHHHHTCT-TEESHHHHHHHHHHHCSSHHHHHHTTCGGGCCTTHH
T ss_pred             cCchHHHHHH-HhcCCeee-C--CCCeEEEcCHHHHHHHHcCC-CcccCcccccccccccccccccccccccccCCchhH
Confidence            3556777766 69999998 6  57799999999999999863 565443211          11222778888999999


Q ss_pred             HHHhhhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhcCCcccHHHHH-HHHhHhHhhhcccCccccccccHHHHHHHHH
Q 039293          150 LKKRKLAVNAFHAENLKNMIPDMIASVDMMLERWRDYEGKEIDAYREI-KVLTSEIISRTAFGSCYLEGENIFNMLTKMA  228 (512)
Q Consensus       150 ~~~Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~~~~vd~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~  228 (512)
                      +++|+++.+.|+...++.+.+.+.+.++++++.|.+  ++++|+...+ ..++.++++.+ ||.+.++.+.+    ..+.
T Consensus        88 ~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~--~~~~dl~~~~~~~~~~~vi~~~-~G~~~~~~~~~----~~~~  160 (397)
T 3buj_A           88 GRLRGVVGPAFSPSALRRLEPVIAGTVDDLLRPALA--RGAMDVVDELAYPLALRAVLGL-LGLPAADWGAV----GRWS  160 (397)
T ss_dssp             HHHHHHHGGGSSTTTTGGGHHHHHHHHHHHHHHHHT--TTEEEHHHHTHHHHHHHHHHHH-HTCCGGGHHHH----HHHH
T ss_pred             HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhh--cCCeehHHHHHHHhHHHHHHHH-hCCCHHHHHHH----HHHH
Confidence            999999999999999999999999999999999975  3589988654 78999999998 99877543222    2222


Q ss_pred             HHHHHhhhhcccccccccccCcchhhhHHHHHHHHHHHHHHHHHHhhhhhcccccccCCcHHHHHHHhccccccccCCCH
Q 039293          229 YIVAKKKYKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKVVKKRESNVLTGEAESYGNDLLGILMRAYHSADETQKISL  308 (512)
Q Consensus       229 ~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~  308 (512)
                      ..+...     ++.   .++....++..++.+.+.+++.+.+++++++        ...|+++.|+++..+   +. +++
T Consensus       161 ~~~~~~-----~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~dll~~ll~~~~~---~~-ls~  220 (397)
T 3buj_A          161 RDVGRT-----LDR---GASAEDMRRGHAAIAEFADYVERALARRRRE--------GGEDLLALMLDAHDR---GL-MSR  220 (397)
T ss_dssp             HHHHGG-----GCS---SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------CCCSHHHHHHHHHHT---TS-SCH
T ss_pred             HHHHhh-----cCC---CCChHHHHHHHHHHHHHHHHHHHHHHHHHcC--------CCCCHHHHHHHhhhc---CC-CCH
Confidence            222111     110   1111223456677788888999999888765        246999999987422   23 999


Q ss_pred             HHHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhCCCCCChhhhccchhHHHHHHhhhccCCCCccc
Q 039293          309 DDLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARKEVLELLGQQNPSADNISRLKIVGMIINETLRLYPPFVVF  388 (512)
Q Consensus       309 ~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~  388 (512)
                      +++.+++..+++||+|||+++++|++++|++||++|+|+++|+                 .|++|||+|+||++|+++.+
T Consensus       221 ~ei~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~-----------------~~l~a~i~E~lRl~p~~~~~  283 (397)
T 3buj_A          221 NEIVSTVVTFIFTGHETVASQVGNAVLSLLAHPDQLDLLRRRP-----------------DLLAQAVEECLRYDPSVQSN  283 (397)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHCG-----------------GGHHHHHHHHHHHSCSCCEE
T ss_pred             HHHHHHHHHHHHcCchHHHHHHHHHHHHHHhCHHHHHHHhhCH-----------------HHHHHHHHHHHhhcCcccCc
Confidence            9999999999999999999999999999999999999999985                 38999999999999999977


Q ss_pred             cceeccccccCCeeeCCCCEEEEccchhccCCCCcCCCCCCCCCCCCCCCCCccccCCCccccccCCCcccccchHHHHH
Q 039293          389 VREVKKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGEDFHLYKPERFAQGVPKATSNNMAAFLPFGLGPRTCVGFNFTII  468 (512)
Q Consensus       389 ~R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~  468 (512)
                      +|.+.+|++++||.||||+.|+++.+++||||++| +||++|+||||.          . .++|||.|+|.|+|++||++
T Consensus       284 ~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~-~dp~~F~PeR~~----------~-~~~~FG~G~r~C~G~~lA~~  351 (397)
T 3buj_A          284 TRQLDVDVELRGRRLRRDDVVVVLAGAANRDPRRY-DRPDDFDIERDP----------V-PSMSFGAGMRYCLGSYLART  351 (397)
T ss_dssp             EEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTC-SSTTSCCTTSCC----------C-CCSTTCCGGGCCTTHHHHHH
T ss_pred             ceEECCCEEECCEEECCCCEEEEChhhhCCCcccc-CCccccCCCCCC----------C-CCCCCCCCCccCCCHHHHHH
Confidence            99999999999999999999999999999999999 999999999995          1 57999999999999999999


Q ss_pred             HHHHHHHHHHhhc-EEEeCCC-CccCCCcceeeecCCCceEEEEeC
Q 039293          469 EAKIALSMILRRY-KFTLSPN-YVHSPVPRITLCPQHGIQVMLRAL  512 (512)
Q Consensus       469 ~~~~~la~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~r  512 (512)
                      |++++++.| ++| ++++.++ .........+.++..+++|++++|
T Consensus       352 e~~~~l~~l-~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~r  396 (397)
T 3buj_A          352 QLRAAVAAL-ARLPGLRLGCASDALAYQPRTMFRGLASLPIAFTPG  396 (397)
T ss_dssp             HHHHHHHHH-HTSTTCEESSCSTTCCBCSCSSCCCBSCCEEECCTT
T ss_pred             HHHHHHHHH-hcCCCceeCCCCcccccccccccCCCcceeEEecCC
Confidence            999999999 999 8999765 222333445667889999999987


No 42 
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Probab=100.00  E-value=2.3e-61  Score=468.07  Aligned_cols=383  Identities=15%  Similarity=0.184  Sum_probs=308.8

Q ss_pred             HCCCCCCCCccCCCCHHHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCCeEEEec-CCee-EEEecCHHHHHH
Q 039293           40 SQGIKGPSYKFFHGNNKEIINMKNEMIMSSSPMELSHQIFPITEPHIYSWIKLYGTNFLMWH-GSQA-ELVVAEPKLIKE  117 (512)
Q Consensus        40 ~~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~vf~~~~-~~~~-~vvv~dpe~i~~  117 (512)
                      .+.+|||+++|+.++..                       .+++.++.+++ +||+||++++ ++.+ .++|+||+.+++
T Consensus         7 ~~~~~~~~~~p~~~~~~-----------------------~~p~~~~~~l~-~~Gpv~~~~~~~g~~p~~vv~~~~~v~~   62 (406)
T 1s1f_A            7 SQAVPPVRDWPAVDLPG-----------------------SDFDPVLTELM-REGPVTRISLPNGEGWAWLVTRHDDVRL   62 (406)
T ss_dssp             -CCSCCEEECCCCCCCT-----------------------TCCCHHHHHHH-HHCSEEEEECSBSBSCEEEECSHHHHHH
T ss_pred             hhhccCCCCCCCCcccc-----------------------cCchHHHHHHH-hcCCeeeeccCCCcccEEEEcCHHHHHH
Confidence            35788988888877611                       14466788884 7999999996 5665 999999999999


Q ss_pred             HHhcCCCCCCCchhh-----hHh-h--hcCceeccCCchHHHHhhhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhcCC
Q 039293          118 IMNNNRSFPKREPRE-----YLK-L--LGNGLVTTRGEKWLKKRKLAVNAFHAENLKNMIPDMIASVDMMLERWRDYEGK  189 (512)
Q Consensus       118 i~~~~~~~~~~~~~~-----~~~-~--~g~~l~~~~g~~w~~~Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~~~  189 (512)
                      ++.++ .|.++....     ... .  .+.++++.+|+.|+++|+++.+.|+...++.+.+.+.+.++++++.|.+ .++
T Consensus        63 vl~~~-~f~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~-~~~  140 (406)
T 1s1f_A           63 VTNDP-RFGREAVMDRQVTRLAPHFIPARGAVGFLDPPDHTRLRRSVAAAFTARGVERVRERSRGMLDELVDAMLR-AGP  140 (406)
T ss_dssp             HHTCT-TEESTTTTTTTBCBSSSSCSSCTTSGGGCCTTHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHH-HCS
T ss_pred             HHcCC-CccCCcCCCCCcccccccccccccccccCCchHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHh-cCC
Confidence            99874 565543221     111 2  3678888999999999999999999999999999999999999999974 246


Q ss_pred             cccHHHHHH-HHhHhHhhhcccCccccccccHHHHHHHHHHHHHHhhhhcccccccccccCcchhhhHHHHHHHHHHHHH
Q 039293          190 EIDAYREIK-VLTSEIISRTAFGSCYLEGENIFNMLTKMAYIVAKKKYKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIK  268 (512)
Q Consensus       190 ~vd~~~~~~-~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~  268 (512)
                      ++|+..++. .++.++++. +||.+.++.+.+......    +...    ..|          .++..++...+.+++.+
T Consensus       141 ~~d~~~~~~~~~~~~vi~~-~~G~~~~~~~~~~~~~~~----~~~~----~~~----------~~~~~~~~~~~~~~~~~  201 (406)
T 1s1f_A          141 PADLTEAVLSPFPIAVICE-LMGVPATDRHSMHTWTQL----ILSS----SHG----------AEVSERAKNEMNAYFSD  201 (406)
T ss_dssp             SEEHHHHTTTHHHHHHHHH-HHTCCGGGHHHHHHHHHH----HHHH----HTT----------CCCCHHHHTHHHHHHHH
T ss_pred             CccHHHHHhhHhHHHHHHH-HhCCCHHHHHHHHHHHHH----HHhc----cCC----------HHHHHHHHHHHHHHHHH
Confidence            899997764 799999998 599877543322222221    1111    011          12456677788888888


Q ss_pred             HHHHHhhhhhcccccccCCcHHHHHHHhccccccccCCCHHHHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHH
Q 039293          269 VVKKRESNVLTGEAESYGNDLLGILMRAYHSADETQKISLDDLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKAR  348 (512)
Q Consensus       269 ~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~  348 (512)
                      .++++++.        ...|+++.+++...+    ..++++++.+++..+++|| |||+++++|++++|++||++|+|++
T Consensus       202 ~i~~r~~~--------~~~d~l~~ll~~~~~----~~ls~~el~~~~~~l~~AG-eTt~~~l~~~l~~L~~~P~~~~~l~  268 (406)
T 1s1f_A          202 LIGLRSDS--------AGEDVTSLLGAAVGR----DEITLSEAVGLAVLLQIGG-EAVTNNSGQMFHLLLSRPELAERLR  268 (406)
T ss_dssp             HHHTSCCS--------CCCSHHHHHHHHHHT----TSSCHHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred             HHHHHHhC--------CCCCHHHHHHHhhcc----cCCCHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHCHHHHHHHH
Confidence            88776643        246999999987422    4789999999999999999 9999999999999999999999999


Q ss_pred             HHHHHHhCCCCCChhhhccchhHHHHHHhhhccCCCCc--cccceeccccccCCeeeCCCCEEEEccchhccCCCCcCCC
Q 039293          349 KEVLELLGQQNPSADNISRLKIVGMIINETLRLYPPFV--VFVREVKKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGED  426 (512)
Q Consensus       349 ~Ei~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~--~~~R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~  426 (512)
                      +|+                 .|++|||+|+||++|+++  +++|.+.+|++++||.||||+.|+++.+++||||++| +|
T Consensus       269 ~E~-----------------~~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~i~G~~Ip~Gt~V~~~~~~~~rdp~~~-~d  330 (406)
T 1s1f_A          269 SEP-----------------EIRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVF-PD  330 (406)
T ss_dssp             HCG-----------------GGHHHHHHHHHHHSCCBSSCCCCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTS-SS
T ss_pred             hCH-----------------HHHHHHHHHHHhhCCCccccCcceEeCCCEEECCEEECCCCEEEeCcHHhcCCcccC-CC
Confidence            985                 279999999999999999  6799999999999999999999999999999999999 99


Q ss_pred             CCCCCCCCCCCCCCccccCCCccccccCCCcccccchHHHHHHHHHHHHHHHhhc-EEEeCCCC-ccCCCcceeeecCCC
Q 039293          427 FHLYKPERFAQGVPKATSNNMAAFLPFGLGPRTCVGFNFTIIEAKIALSMILRRY-KFTLSPNY-VHSPVPRITLCPQHG  504 (512)
Q Consensus       427 p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~la~ll~~f-~~~~~~~~-~~~~~~~~~~~~~~~  504 (512)
                      |++|+||||..           .++|||.|+|.|+|++||++|++++++.|+++| ++++.++. ......+.+.++..+
T Consensus       331 P~~F~PeR~~~-----------~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~  399 (406)
T 1s1f_A          331 PDRIDFERSPN-----------PHVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAPEDVPFKKGALIRGPEA  399 (406)
T ss_dssp             TTSCCTTC--C-----------CCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHSTTCEESSCGGGSCBCSSCSBCCBSC
T ss_pred             cceeCCCCCCC-----------CCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCcEeCCCCccceeccCcccCCcce
Confidence            99999999951           579999999999999999999999999999999 79997652 222333455677888


Q ss_pred             ceEEE
Q 039293          505 IQVML  509 (512)
Q Consensus       505 ~~v~~  509 (512)
                      ++|++
T Consensus       400 lpv~~  404 (406)
T 1s1f_A          400 LPVTW  404 (406)
T ss_dssp             CEEEC
T ss_pred             eEEee
Confidence            98886


No 43 
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00  E-value=7.1e-61  Score=465.26  Aligned_cols=373  Identities=20%  Similarity=0.277  Sum_probs=302.0

Q ss_pred             CchHHHHHHHHHhCCeEEEecCCeeEEEecCHHHHHHHHhcCCCCCCCch---h---hhH---h----hhcCceeccCCc
Q 039293           81 ITEPHIYSWIKLYGTNFLMWHGSQAELVVAEPKLIKEIMNNNRSFPKREP---R---EYL---K----LLGNGLVTTRGE  147 (512)
Q Consensus        81 ~~~~~~~~~~~kyG~vf~~~~~~~~~vvv~dpe~i~~i~~~~~~~~~~~~---~---~~~---~----~~g~~l~~~~g~  147 (512)
                      +++..+.+| ++||+||++++++.+.++++||+.+++++.++. +.++..   .   ...   .    ..+.++++.+|+
T Consensus        16 ~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~   93 (408)
T 1odo_A           16 DHHTEHRTL-REGGPATWVDVLGVQAWSVSDPVLLKQLLTSSD-VSKDARAHWPAFGEVVGTWPLALWVAVENMFTAYGP   93 (408)
T ss_dssp             THHHHHHHH-HTTCSEEEEEETTEEEEEECCHHHHHHHTTCTT-EESCHHHHCTTHHHHTTTCTTTHHHHCCSGGGCCHH
T ss_pred             ChHHHHHHH-HHhCCeEEeccCCCCEEEECCHHHHHHHHcCCC-cccccccccccccccccccccccccccccccccCCh
Confidence            456678899 999999999998888999999999999998654 333321   0   000   0    135678888999


Q ss_pred             hHHHHhhhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhc-CCcccHHHHHH-HHhHhHhhhcccCccccccccHHHHHH
Q 039293          148 KWLKKRKLAVNAFHAENLKNMIPDMIASVDMMLERWRDYE-GKEIDAYREIK-VLTSEIISRTAFGSCYLEGENIFNMLT  225 (512)
Q Consensus       148 ~w~~~Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~-~~~vd~~~~~~-~~~~~~i~~~~fG~~~~~~~~~~~~~~  225 (512)
                      .|+++|+++.+.|+...++.+.+.+.+.++++++.|.+.. ++++|+..++. .++.++++. +||.+.++.+.+.    
T Consensus        94 ~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~~~~~----  168 (408)
T 1odo_A           94 NHRKLRRLVAPAFSARRVDAMRPAVEAMVTGLVDRLAELPAGEPVDLRQELAYPLPIAVIGH-LMGVPQDRRDGFR----  168 (408)
T ss_dssp             HHHHHHHTTGGGGSHHHHHHHHHHHHHHHHHHHHHHHHSCTTSCEEHHHHTTTHHHHHHHHH-HHTCCHHHHHHHH----
T ss_pred             HHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchHHHHhhhhHHHHHHH-HhCCCHHHHHHHH----
Confidence            9999999999999999999999999999999999998543 45899999887 599999996 6998754322221    


Q ss_pred             HHHHHHHHhhhhcccccccccccCcchhhhHHHHHHHHHHHHHHHHHHhhhhhcccccccCCcHHHHHHHhccccccccC
Q 039293          226 KMAYIVAKKKYKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKVVKKRESNVLTGEAESYGNDLLGILMRAYHSADETQK  305 (512)
Q Consensus       226 ~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~  305 (512)
                      .....+..       ..       ....+..++...+.+++.+.+++++++        ...|+++.|+++..++..+..
T Consensus       169 ~~~~~~~~-------~~-------~~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~d~l~~ll~~~~~~~~~~~  226 (408)
T 1odo_A          169 ALVDGVFD-------TT-------LDQAEAQANTARLYEVLDQLIAAKRAT--------PGDDMTSLLIAARDDEGDGDR  226 (408)
T ss_dssp             HHHHHHHC-------TT-------CCHHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHHHHHCC-----C
T ss_pred             HHHHHHhc-------cc-------CCHHHHHHHHHHHHHHHHHHHHHHhhC--------CCCCHHHHHHHhcccccccCC
Confidence            11111110       00       112446677788888999999887754        247999999987543211356


Q ss_pred             CCHHHHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhCCCCCChhhhccchhHHHHHHhhhccCCCC
Q 039293          306 ISLDDLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARKEVLELLGQQNPSADNISRLKIVGMIINETLRLYPPF  385 (512)
Q Consensus       306 l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~  385 (512)
                      ++++++.+++.++++||+|||+++++|++++|++||++|+|+++|+                 .|++|||+|+||++|++
T Consensus       227 l~~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~-----------------~~l~a~i~E~lRl~p~~  289 (408)
T 1odo_A          227 LSPEELRDTLLLMISAGYETTVNVIDQAVHTLLTRPDQLALVRKGE-----------------VTWADVVEETLRHEPAV  289 (408)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCHHHHHHHHHTS-----------------SCHHHHHHHHHHHSCSB
T ss_pred             CCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHCHHHHHHHHhCH-----------------HHHHHHHHHHHhhCCCc
Confidence            9999999999999999999999999999999999999999999973                 46999999999999999


Q ss_pred             cc-ccceeccccccC-CeeeCCCCEEEEccchhccCCCCcCCCCCCCCCCCCCCCCCccccCCCccccccCCCcccccch
Q 039293          386 VV-FVREVKKEVKLG-DLIVPANVDVTIPVIAVHHDPQIWGEDFHLYKPERFAQGVPKATSNNMAAFLPFGLGPRTCVGF  463 (512)
Q Consensus       386 ~~-~~R~~~~d~~~~-g~~IpkG~~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~  463 (512)
                      +. ++|.+.+|++++ ||.||||+.|+++.+++||||++| +||++|+|||+          +. .++|||.|+|.|+|+
T Consensus       290 ~~~~~R~~~~d~~l~~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dp~~F~PeR~----------~~-~~~pFG~G~r~C~G~  357 (408)
T 1odo_A          290 KHLPLRYAVTDIALPDGRTIARGEPILASYAAANRHPDWH-EDADTFDATRT----------VK-EHLAFGHGVHFCLGA  357 (408)
T ss_dssp             SCEEEEEESSCEECTTSCEECTTCEEEECHHHHTTCTTTS-TTTTSCCTTCS----------CC-CCCTTCSSTTSCTTH
T ss_pred             cCCcceEeCCCeEcCCCcEECCCCEEEeChhhhcCChhhc-CCccccCCCCC----------CC-CCCCCCCCCccCCCH
Confidence            96 699999999999 999999999999999999999999 99999999994          12 689999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhc-EEEeCCC-CccCCCcceeeecCCCceEEEEe
Q 039293          464 NFTIIEAKIALSMILRRY-KFTLSPN-YVHSPVPRITLCPQHGIQVMLRA  511 (512)
Q Consensus       464 ~la~~~~~~~la~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~  511 (512)
                      +||++|++++++.|+++| ++++..+ .........+.++..+++|++++
T Consensus       358 ~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~  407 (408)
T 1odo_A          358 PLARMEVTLALESLFGRFPDLRLADPAEELPPVPSLISNGHQRLPVLLHA  407 (408)
T ss_dssp             HHHHHHHHHHHHHHHHHCTTCEESCTTSCCCBCSCSSBCCBSCCEEECC-
T ss_pred             HHHHHHHHHHHHHHHHhCCcceecCCccccccccCccccCcccceEEecC
Confidence            999999999999999999 7998633 23333445667888999999875


No 44 
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Probab=100.00  E-value=1.2e-61  Score=470.55  Aligned_cols=373  Identities=16%  Similarity=0.164  Sum_probs=303.3

Q ss_pred             cCchHHHHHHHHHhCCeE-----EEecCCeeEEEecCHHHHHHHHhcCCCCCCCchhh--hH--h----hhcCceeccCC
Q 039293           80 PITEPHIYSWIKLYGTNF-----LMWHGSQAELVVAEPKLIKEIMNNNRSFPKREPRE--YL--K----LLGNGLVTTRG  146 (512)
Q Consensus        80 ~~~~~~~~~~~~kyG~vf-----~~~~~~~~~vvv~dpe~i~~i~~~~~~~~~~~~~~--~~--~----~~g~~l~~~~g  146 (512)
                      .+++.++.++ ++|||||     ++++  .+.++|+||+.+++++.++..|.+++...  ..  .    ..+.++++.+|
T Consensus        25 ~~p~~~~~~l-~~~Gpv~~~~~~~~~~--~~~vvv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~~~~g  101 (414)
T 2uuq_A           25 PNPWPMYRAL-RDHDPVHHVVPPQRPE--YDYYVLSRHADVWSAARDHQTFSSAQGLTVNYGELEMIGLHDTPPMVMQDP  101 (414)
T ss_dssp             TCCHHHHHHH-HHHCSEEEECCTTCGG--GCEEEECSHHHHHHHHHCTTTEESTTCSSSCTTHHHHHTCSSSCCGGGCCT
T ss_pred             cCchHHHHHH-HhcCCEEcccccccCC--CCEEEEcCHHHHHHHHcCchhccCCCCcccccCcccccccccccccccCCc
Confidence            5677788888 5799998     7776  56899999999999998765575553221  11  2    23678888899


Q ss_pred             chHHHHhhhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhcCCcccHHH-HHHHHhHhHhhhcccCccccccccHHHHHH
Q 039293          147 EKWLKKRKLAVNAFHAENLKNMIPDMIASVDMMLERWRDYEGKEIDAYR-EIKVLTSEIISRTAFGSCYLEGENIFNMLT  225 (512)
Q Consensus       147 ~~w~~~Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~~~~vd~~~-~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~  225 (512)
                      +.|+++|+++.+.|+...++.+.+.+.+.++++++.|.+.  +++|+.. ....++.++++. +||.+.++.+.+.....
T Consensus       102 ~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~--~~vdl~~~~~~~~~~~vi~~-~~G~~~~~~~~~~~~~~  178 (414)
T 2uuq_A          102 PVHTEFRKLVSRGFTPRQVETVEPTVRKFVVERLEKLRAN--GGGDIVTELFKPLPSMVVAH-YLGVPEEDWTQFDGWTQ  178 (414)
T ss_dssp             THHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHHHHHHHHT--TEEEHHHHTTTHHHHHHHHH-HTTCCGGGHHHHHHHHH
T ss_pred             hhHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHHHhc--CCccHHHHHHHHhHHHHHHH-HhCCCHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999764  5799975 467999999999 68998764333322222


Q ss_pred             HHHHHHHHhhhhccc-ccccccccCcchhhhHHHHHHHHHHHHHHHHHHhhhhhcccccccCCcHHHHHHHhcccccccc
Q 039293          226 KMAYIVAKKKYKLEI-PGIGKLLKTNDDIESDKLEQDIRDSIIKVVKKRESNVLTGEAESYGNDLLGILMRAYHSADETQ  304 (512)
Q Consensus       226 ~~~~~~~~~~~~~~~-P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~  304 (512)
                      .+    ...   ..+ |..         .+..++..++.+++.+.+++++++        ...|+++.+++...++ .+.
T Consensus       179 ~~----~~~---~~~~p~~---------~~~~~~~~~~~~~~~~~i~~r~~~--------~~~dll~~ll~~~~~~-~~~  233 (414)
T 2uuq_A          179 AI----VAA---NAVDGAT---------TGALDAVGSMMAYFTGLIERRRTE--------PADDAISHLVAAGVGA-DGD  233 (414)
T ss_dssp             HH----HHH---HHC--------------CCHHHHHHHHHHHHHHHHHHTTS--------CCSSHHHHHHHTTTTC-TTC
T ss_pred             HH----Hhh---cccCCch---------hHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHhccccc-CCC
Confidence            11    111   111 211         234567788888999998887754        2479999999875321 134


Q ss_pred             CCCHHHHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhCCCCCChhhhccchhHHHHHHhhhccCCC
Q 039293          305 KISLDDLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARKEVLELLGQQNPSADNISRLKIVGMIINETLRLYPP  384 (512)
Q Consensus       305 ~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~  384 (512)
                      .++++++.+++..+++||+|||+++++|++++|++||++|+|+++|+                 +|++|||+|+||++|+
T Consensus       234 ~ls~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~-----------------~~l~a~i~E~lRl~p~  296 (414)
T 2uuq_A          234 TAGTLSILAFTFTMVTGGNDTVTGMLGGSMPLLHRRPDQRRLLLDDP-----------------EGIPDAVEELLRLTSP  296 (414)
T ss_dssp             HHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCG-----------------GGHHHHHHHHHHHHCS
T ss_pred             CCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHhCH-----------------HHHHHHHHHHHHhCCC
Confidence            58899999999999999999999999999999999999999999985                 4899999999999999


Q ss_pred             CccccceeccccccCCeeeCCCCEEEEccchhccCCCCcCCCCCCCCCCCCCCCCCccccCCCccccccCCCcccccchH
Q 039293          385 FVVFVREVKKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGEDFHLYKPERFAQGVPKATSNNMAAFLPFGLGPRTCVGFN  464 (512)
Q Consensus       385 ~~~~~R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~  464 (512)
                      ++.++|.+.+|++++||.||||+.|+++.+++||||++||+||++|+||||..           .++|||.|+|.|+|++
T Consensus       297 ~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeR~~~-----------~~~~FG~G~r~C~G~~  365 (414)
T 2uuq_A          297 VQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPDAAELDVTRCPR-----------NILTFSHGAHHCLGAA  365 (414)
T ss_dssp             BCCEEEEESSCEEETTEEECTTCEEEECHHHHTTCHHHHCTTTTSCCTTCCCC-----------SCCTTCSSTTCCTTHH
T ss_pred             cCCcceEECCCEEECCEEECCCCEEEeChhhhCCCHHHhCCCchhcCCCCCCC-----------CCcCCCCCCccCCCHH
Confidence            99779999999999999999999999999999999999999999999999851           5899999999999999


Q ss_pred             HHHHHHHHHHHHHHhhc-EEEeCCCCccCCCcceeeecCCCceEEEEeC
Q 039293          465 FTIIEAKIALSMILRRY-KFTLSPNYVHSPVPRITLCPQHGIQVMLRAL  512 (512)
Q Consensus       465 la~~~~~~~la~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  512 (512)
                      ||++|++++++.|+++| ++++.++ ........+.++..+++|++++|
T Consensus       366 lA~~e~~~~la~ll~~f~~~~l~~~-~~~~~~~~~~~~~~~lpv~~~~r  413 (414)
T 2uuq_A          366 AARMQCRVALTELLARCPDFEVAES-RIVWSGGSYVRRPLSVPFRVTSS  413 (414)
T ss_dssp             HHHHHHHHHHHHHHHHCCSEEECGG-GCEECCCSSBCCEEECEEEEC--
T ss_pred             HHHHHHHHHHHHHHHhCcccEECCC-CccccccccccCcceeEEEecCC
Confidence            99999999999999999 6999743 22223345567888999999886


No 45 
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A*
Probab=100.00  E-value=1.4e-61  Score=468.94  Aligned_cols=371  Identities=18%  Similarity=0.202  Sum_probs=303.7

Q ss_pred             ccccCchHHHHHHHHHh--CCeEEEecCCeeEEEecCHHHHHHHHhcCCCCCCCchhh---hHhhhcCceeccCCchHHH
Q 039293           77 QIFPITEPHIYSWIKLY--GTNFLMWHGSQAELVVAEPKLIKEIMNNNRSFPKREPRE---YLKLLGNGLVTTRGEKWLK  151 (512)
Q Consensus        77 ~~~~~~~~~~~~~~~ky--G~vf~~~~~~~~~vvv~dpe~i~~i~~~~~~~~~~~~~~---~~~~~g~~l~~~~g~~w~~  151 (512)
                      .+..+++.++.+|+++|  |+||++++++ +.++|+||+.+++++.+.+.|.+++...   .....+.+++..+|+.|++
T Consensus        16 ~~~~~p~~~~~~l~~~Y~~Gpv~~~~~~~-~~~vv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   94 (398)
T 4fb2_A           16 GPDGTPHAFFEALRDEAETTPIGWSEAYG-GHWVVAGYKEIQAVIQNTKAFSNKGVTFPRYETGEFELMMAGQDDPVHKK   94 (398)
T ss_dssp             CTTSSSHHHHHHHHHHHTTCSEEEECGGG-CEEEECSHHHHHHHHTCCSSEEGGGCSSSCC----CCCTTTTCCTTHHHH
T ss_pred             hhhcChhHHHHHHHhcCCCCCeEEecCCC-CEEEEccHHHHHHHHhChhhccCCcccccCCCCcccccCcccCCchHHHH
Confidence            34567788999999999  9999999986 4899999999999996655665543221   1112234567789999999


Q ss_pred             HhhhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhcCCcccHHHHH-HHHhHhHhhhcccCccccccccHHHHHHHHHHH
Q 039293          152 KRKLAVNAFHAENLKNMIPDMIASVDMMLERWRDYEGKEIDAYREI-KVLTSEIISRTAFGSCYLEGENIFNMLTKMAYI  230 (512)
Q Consensus       152 ~Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~~~~vd~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~  230 (512)
                      +|+++.+.|+...++.+.+.+.++++++++.|.+.  +.+|+...+ ..++.++++. +||.+.++.+.+.+...    .
T Consensus        95 ~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~--~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~~~~~~~~~----~  167 (398)
T 4fb2_A           95 YRQLVAKPFSPEATDLFTEQLRQSTNDLIDARIEL--GEGDAATWLANEIPARLTAI-LLGLPPEDGDTYRRWVW----A  167 (398)
T ss_dssp             HHHHHHTTTCHHHHHTTHHHHHHHHHHHHHTTTTT--TEEEHCCCCCTTHHHHHHHH-HTTSCGGGHHHHHHHHH----H
T ss_pred             HHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhhc--CCccHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHH----H
Confidence            99999999999999999999999999999998653  578876665 6899999998 68987653332222221    1


Q ss_pred             HHHhhhhcccccccccccCcchhhhHHHHHHHHHHHHHHHHHHhhhhhcccccccCCcHHHHHHHhccccccccCCCHHH
Q 039293          231 VAKKKYKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKVVKKRESNVLTGEAESYGNDLLGILMRAYHSADETQKISLDD  310 (512)
Q Consensus       231 ~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~  310 (512)
                      +..       +.        ...+..++.+.+.+++.+.+++++++        ...|+++.++++..+   +..+++++
T Consensus       168 ~~~-------~~--------~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~d~l~~ll~~~~~---~~~l~~~~  221 (398)
T 4fb2_A          168 ITH-------VE--------NPEEGAEIFAELVAHARTLIAERRTN--------PGNDIMSRVIMSKID---GESLSEDD  221 (398)
T ss_dssp             HHH-------CC--------CHHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHHHCCBT---TBCCCHHH
T ss_pred             Hhc-------CC--------CHHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHHcccC---CCCCCHHH
Confidence            111       11        12356778888899999999888765        357999999987543   35699999


Q ss_pred             HHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhCCCCCChhhhccchhHHHHHHhhhccCCCCccccc
Q 039293          311 LIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARKEVLELLGQQNPSADNISRLKIVGMIINETLRLYPPFVVFVR  390 (512)
Q Consensus       311 i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R  390 (512)
                      +..++..+++||+|||+++++|++++|++||++|+|+++|++                 +++|||+|+||++|+++ ++|
T Consensus       222 i~~~~~~l~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~-----------------~l~a~i~E~lRl~p~~~-~~R  283 (398)
T 4fb2_A          222 LIGFFTILLLGGIDNTARFLSSVFWRLAWDIELRRRLIAHPE-----------------LIPNAVDELLRFYGPAM-VGR  283 (398)
T ss_dssp             HHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCGG-----------------GHHHHHHHHHHHHCCBC-EEE
T ss_pred             HHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH-----------------HHHHHHHHHHHhCCCcC-CCe
Confidence            999999999999999999999999999999999999999963                 68999999999999999 999


Q ss_pred             eeccccccCCeeeCCCCEEEEccchhccCCCCcCCCCCCCCCCCCCCCCCccccCCCccccccCCCcccccchHHHHHHH
Q 039293          391 EVKKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGEDFHLYKPERFAQGVPKATSNNMAAFLPFGLGPRTCVGFNFTIIEA  470 (512)
Q Consensus       391 ~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~  470 (512)
                      .+.+|++++||.||||+.|+++.+++||||++| +||++|+||||-          . .++|||+|+|.|+|++||++|+
T Consensus       284 ~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~-~dp~~F~PeR~~----------~-~~~~FG~G~r~C~G~~lA~~e~  351 (398)
T 4fb2_A          284 LVTQEVTVGDITMKPGQTAMLWFPIASRDRSAF-DSPDNIVIERTP----------N-RHLSLGHGIHRCLGAHLIRVEA  351 (398)
T ss_dssp             EECSCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTCCS----------C-CCCTTCCSTTCCTTHHHHHHHH
T ss_pred             eeCCCEEECCEEECCCCEEEechHhhcCChhhC-CCcCeeCCCCCC----------C-CCCCCCCCCcCCCCHHHHHHHH
Confidence            999999999999999999999999999999999 999999999982          2 6899999999999999999999


Q ss_pred             HHHHHHHHhhc-EEEeCCCCccCCCcceeeecCCCceEEEEeC
Q 039293          471 KIALSMILRRY-KFTLSPNYVHSPVPRITLCPQHGIQVMLRAL  512 (512)
Q Consensus       471 ~~~la~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  512 (512)
                      +++++.|+++| ++++.++.........+ ....+++|++++|
T Consensus       352 ~~~l~~ll~~f~~~~~~~~~~~~~~~~~~-~~~~~lpv~~~~~  393 (398)
T 4fb2_A          352 RVAITEFLKRIPEFSLDPNKECEWLMGQV-AGMLHVPIIFPKG  393 (398)
T ss_dssp             HHHHHHHHHHCCSCEECTTSCCEEECSSB-CEEEECEEECCCC
T ss_pred             HHHHHHHHHhCCCcEECCCCCceeccccc-cccceeEEEEcCC
Confidence            99999999999 99998764333222233 3334588888775


No 46 
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis}
Probab=100.00  E-value=4.4e-61  Score=465.44  Aligned_cols=374  Identities=15%  Similarity=0.154  Sum_probs=303.9

Q ss_pred             cCchHHHHHHHHHhCCeEEEecCCeeEEEecCHHHHHHHHhcCCCCCCCchhhhHhhhcCceeccCCchHHHHhhhhcCc
Q 039293           80 PITEPHIYSWIKLYGTNFLMWHGSQAELVVAEPKLIKEIMNNNRSFPKREPREYLKLLGNGLVTTRGEKWLKKRKLAVNA  159 (512)
Q Consensus        80 ~~~~~~~~~~~~kyG~vf~~~~~~~~~vvv~dpe~i~~i~~~~~~~~~~~~~~~~~~~g~~l~~~~g~~w~~~Rr~~~~~  159 (512)
                      .+++.++.++++ ||+||++.  . +.++|+||+.+++++.+.+.|.+++......+.+.++++.+|+.|+++|+++.+.
T Consensus        18 ~~p~~~~~~l~~-~Gpv~~~~--~-~~vvv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~l~~~~g~~h~~~R~~~~~~   93 (398)
T 2xkr_A           18 REARAAYRWMRA-NQPVFRDR--N-GLAAASTYQAVIDAERQPELFSNAGGIRPDQPALPMMIDMDDPAHLLRRKLVNAG   93 (398)
T ss_dssp             TTHHHHHHHHHH-HCSEEECT--T-CCEEECSHHHHHHHHTCTTTEESTTCSSTTSCCCSSGGGCCTTHHHHHHHHHGGG
T ss_pred             cChhHHHHHHHh-cCCeeecC--C-CeEEEecHHHHHHHHhCcccccCccccCCcccccccccccCchHHHHHHHHhhhh
Confidence            456778889987 99998554  4 6899999999999998765665543211222346778888999999999999999


Q ss_pred             CCHHHHhhhHHHHHHHHHHHHHHHHhhcCCcccHHHH-HHHHhHhHhhhcccCccccccccHHHHHHHHHHHHHHhhhhc
Q 039293          160 FHAENLKNMIPDMIASVDMMLERWRDYEGKEIDAYRE-IKVLTSEIISRTAFGSCYLEGENIFNMLTKMAYIVAKKKYKL  238 (512)
Q Consensus       160 ~~~~~l~~~~~~i~~~~~~li~~l~~~~~~~vd~~~~-~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (512)
                      |+...++.+.+.+.+.++++++.|.+.  +++|+... ...++.++++.+ ||.+.++.+.+......+.    ..    
T Consensus        94 fs~~~l~~~~~~i~~~~~~l~~~l~~~--~~~d~~~~~~~~~~~~vi~~~-fG~~~~~~~~~~~~~~~~~----~~----  162 (398)
T 2xkr_A           94 FTRKRVKDKEASIAALCDTLIDAVCER--GECDFVRDLAAPLPMAVIGDM-LGVRPEQRDMFLRWSDDLV----TF----  162 (398)
T ss_dssp             SCHHHHHTTHHHHHHHHHHHHHTTTTT--SEEEHHHHTTTHHHHHHHHHH-HTCCGGGHHHHHHHHHHHH----HH----
T ss_pred             hCHHHHHHHHHHHHHHHHHHHHhhhhc--CCccHHHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHHHHH----hc----
Confidence            999999999999999999999999653  58999955 568999999998 9998754333332222221    11    


Q ss_pred             ccccccccccCcchhhhHHHHHHHHHHHHHHHHHHhhhhhcccccccCCcHHHHHHHhccccccccCCCHHHHHHHHHHH
Q 039293          239 EIPGIGKLLKTNDDIESDKLEQDIRDSIIKVVKKRESNVLTGEAESYGNDLLGILMRAYHSADETQKISLDDLIDECKTF  318 (512)
Q Consensus       239 ~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~  318 (512)
                      ..|.   ++| ...++..++...+.+++.+.+++++++        ...|+++.|++...+   +..++++++.+++..+
T Consensus       163 ~~~~---~~p-~~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~dll~~ll~~~~~---~~~ls~~ei~~~~~~l  227 (398)
T 2xkr_A          163 LSSH---VSQ-EDFQITMDAFAAYNDFTRATIAARRAD--------PTDDLVSVLVSSEVD---GERLSDDELVMETLLI  227 (398)
T ss_dssp             HTSC---CCH-HHHHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHHHCCBT---TBCCCHHHHHHHHHHH
T ss_pred             cCcc---cch-hhHHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHHhhcc---CCCCCHHHHHHHHHHH
Confidence            1121   112 123456677788888999988887754        357999999987542   3569999999999999


Q ss_pred             HHhchhhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhCCCCCChhhhccchhHHHHHHhhhccCCCCccccceecccccc
Q 039293          319 YVAGTDTTASLLSWTIFLLAIHSDWQDKARKEVLELLGQQNPSADNISRLKIVGMIINETLRLYPPFVVFVREVKKEVKL  398 (512)
Q Consensus       319 ~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~~  398 (512)
                      ++||+|||+++++|++++|++||++|+|+++|++                 |++|||+|+||++|+++.++|.+.+|+++
T Consensus       228 ~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~-----------------~l~a~i~E~lRl~p~~~~~~R~~~~d~~l  290 (398)
T 2xkr_A          228 LIGGDETTRHTLSGGTEQLLRNRDQWDLLQRDPS-----------------LLPGAIEEMLRWTAPVKNMCRVLTADTEF  290 (398)
T ss_dssp             HHHHSHHHHHHHHHHHHHHHHSHHHHHHHHHCGG-----------------GHHHHHHHHHHHHCSBCEEEEEESSCEEE
T ss_pred             HHHhhHHHHHHHHHHHHHHHHCHHHHHHHHhCHH-----------------HHHHHHHHHHhhcccccCcceEECCCeeE
Confidence            9999999999999999999999999999999963                 89999999999999999889999999999


Q ss_pred             CCeeeCCCCEEEEccchhccCCCCcCCCCCCCCCCCCCCCCCccccCCCccccccCCCcccccchHHHHHHHHHHHHHHH
Q 039293          399 GDLIVPANVDVTIPVIAVHHDPQIWGEDFHLYKPERFAQGVPKATSNNMAAFLPFGLGPRTCVGFNFTIIEAKIALSMIL  478 (512)
Q Consensus       399 ~g~~IpkG~~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~la~ll  478 (512)
                      +||.||||+.|+++.+++||||++| +||++|+||||.+           .++|||.|+|.|+|++||++|++++++.|+
T Consensus       291 ~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~~-----------~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll  358 (398)
T 2xkr_A          291 HGTALCAGEKMMLLFESANFDEAVF-CEPEKFDVQRNPN-----------SHLAFGFGTHFCLGNQLARLELSLMTERVL  358 (398)
T ss_dssp             TTEEECTTCEEEEEHHHHHTCTTTS-SSTTSCCTTCSSC-----------CCCTTCCSTTCCTTHHHHHHHHHHHHHHHH
T ss_pred             CCEEECCCCEEEeChhhhcCChhhC-CCCCeeCCCCCCC-----------CCCcCCCCCcCCcCHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999 9999999999842           479999999999999999999999999999


Q ss_pred             hhc-EEEeCCCCccC-CCcceeeecCCCceEEEEeC
Q 039293          479 RRY-KFTLSPNYVHS-PVPRITLCPQHGIQVMLRAL  512 (512)
Q Consensus       479 ~~f-~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~r  512 (512)
                      ++| ++++.++.... ...........+++|++++|
T Consensus       359 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~lpv~~~p~  394 (398)
T 2xkr_A          359 RRLPDLRLVADDSVLPLRPANFVSGLESMPVVFTPS  394 (398)
T ss_dssp             HHSTTCEESCTTCCCCBCCCSSBCCBSCCEEECCCC
T ss_pred             HhCCCceECCCcceecccCcccccCccceeEEecCC
Confidence            999 59997432221 02334456677899998775


No 47 
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A*
Probab=100.00  E-value=4.8e-62  Score=477.07  Aligned_cols=385  Identities=17%  Similarity=0.241  Sum_probs=296.7

Q ss_pred             ccCchHHHHHHHHHhCCeEEEecCCeeEEEecCHHHHHHHHhcCCCCCCCchhh-hHhhhcC-ceeccCCchHHHHhhhh
Q 039293           79 FPITEPHIYSWIKLYGTNFLMWHGSQAELVVAEPKLIKEIMNNNRSFPKREPRE-YLKLLGN-GLVTTRGEKWLKKRKLA  156 (512)
Q Consensus        79 ~~~~~~~~~~~~~kyG~vf~~~~~~~~~vvv~dpe~i~~i~~~~~~~~~~~~~~-~~~~~g~-~l~~~~g~~w~~~Rr~~  156 (512)
                      ..+++.++.++ ++|||||++..++  .++|++|+.+++++.+...|.++.... ....+|. +++..+|+.|+++|+++
T Consensus        52 ~~~p~~~~~~l-r~~gpv~~~~~~~--~~vv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~l~~~dg~~h~~~Rr~~  128 (441)
T 3nc3_A           52 QNNPYAYFSQL-REEDPVHYEESID--SYFISRYHDVRYILQHPDIFTTKSLVERAEPVMRGPVLAQMHGKEHSAKRRIV  128 (441)
T ss_dssp             HHCGGGTHHHH-HHHCSEEEETTTT--EEEECCHHHHHHHHHCTTTEECCCTTSCCCCSCC-------------CCHHHH
T ss_pred             hcChHHHHHHH-HhcCCEEEeCCCC--EEEEcCHHHHHHHhcCcccccccccccccccccCCCccccCCcHHHHHHHHHH
Confidence            34566777776 7899999987765  799999999999998876675554332 3334454 47888999999999999


Q ss_pred             cCcCCHHHHhhhHHHHHHHHHHHHHHHHhhcCCcccHHHHH-HHHhHhHhhhcccCccccccccHHHHHHHHHHHHHHhh
Q 039293          157 VNAFHAENLKNMIPDMIASVDMMLERWRDYEGKEIDAYREI-KVLTSEIISRTAFGSCYLEGENIFNMLTKMAYIVAKKK  235 (512)
Q Consensus       157 ~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~~~~vd~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~  235 (512)
                      .+.|+...++.+.+.+.+.++++++.|.+  ++.+|+...+ ..++.++++. +||.+..+.+.+......+...+.   
T Consensus       129 ~~~fs~~~l~~~~~~i~~~~~~ll~~l~~--~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~~~~~~~~~~~~~~~~~---  202 (441)
T 3nc3_A          129 VRSFIGDALDHLSPLIKQNAENLLAPYLE--RGKSDLVNDFGKTFAVCVTMD-MLGLDKRDHEKISEWHSGVADFIT---  202 (441)
T ss_dssp             HHHHHHTHHHHHHHHHHHHHHHHHTTTTT--TTEEECCCCCHHHHHHHHHHH-HTTCCGGGHHHHHHHHHHHHHHHH---
T ss_pred             HhhcCHHHHHHHHHHHHHHHHHHHHHHHh--cCCCcHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHhcc---
Confidence            99999999999999999999999999864  3578875554 5689999998 589876543333333332222211   


Q ss_pred             hhcccccccccccCcchhhhHHHHHHHHHHHHHHHHHHhhhhhcccccccCCcHHHHHHHhccccccccCCCHHHHHHHH
Q 039293          236 YKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKVVKKRESNVLTGEAESYGNDLLGILMRAYHSADETQKISLDDLIDEC  315 (512)
Q Consensus       236 ~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~  315 (512)
                       ....+       ........++.+.+.+++.+.+++++++        ...|+++.|++...+   +..++++++.+++
T Consensus       203 -~~~~~-------~~~~~~~~~~~~~l~~~~~~~i~~rr~~--------~~~Dll~~Ll~~~~~---~~~ls~~el~~~~  263 (441)
T 3nc3_A          203 -SISQS-------PEARAHSLWCSEQLSQYLMPVIKERRVN--------PGSDLISILCTSEYE---GMALSDKDILALI  263 (441)
T ss_dssp             -CSCCC-------HHHHHHHHHHHHHHHHHHHHHHHHHTTS--------CCSSHHHHHCC---------CCCHHHHHHHH
T ss_pred             -cccCC-------hHHHHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHHhhcc---CCCCCHHHHHHHH
Confidence             10111       1113456677788889999999888754        357999999876542   4579999999999


Q ss_pred             HHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhCCCCCChhhhccchhHHHHHHhhhccCCCCccccceeccc
Q 039293          316 KTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARKEVLELLGQQNPSADNISRLKIVGMIINETLRLYPPFVVFVREVKKE  395 (512)
Q Consensus       316 ~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d  395 (512)
                      ..+++||+|||+++++|++++|++||++|+++++|+                 +|++|||+|+||++|+++.++|.+++|
T Consensus       264 ~~ll~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~-----------------~~l~a~i~E~LRl~pp~~~~~R~~~~d  326 (441)
T 3nc3_A          264 LNVLLAATEPADKTLALMIYHLLNNPEQMNDVLADR-----------------SLVPRAIAETLRYKPPVQLIPRQLSQD  326 (441)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHCG-----------------GGHHHHHHHHHHHSCSBCEEEEEESSC
T ss_pred             HHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhCH-----------------HHHHHHHHHhhhcCCcccCccEEECCC
Confidence            999999999999999999999999999999999974                 699999999999999999999999999


Q ss_pred             cccCCeeeCCCCEEEEccchhccCCCCcCCCCCCCCCCCCCCCCCccccCCCccccccCCCcccccchHHHHHHHHHHHH
Q 039293          396 VKLGDLIVPANVDVTIPVIAVHHDPQIWGEDFHLYKPERFAQGVPKATSNNMAAFLPFGLGPRTCVGFNFTIIEAKIALS  475 (512)
Q Consensus       396 ~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~la  475 (512)
                      ++++||.||||+.|+++.+++||||++| +||++|+||||+.........+. .++|||.|+|.|+|++||++|++++++
T Consensus       327 ~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f-~dP~~F~PeR~~~~~~~~~~~~~-~~l~FG~G~r~C~G~~lA~~e~~~~l~  404 (441)
T 3nc3_A          327 TVVGGMEIKKDTIVFCMIGAANRDPEAF-EQPDVFNIHREDLGIKSAFSGAA-RHLAFGSGIHNCVGTAFAKNEIEIVAN  404 (441)
T ss_dssp             EESSSCEECTTCEEEEEHHHHHTCTTTS-SSTTSCCTTCTTSCGGGTTSSSC-SSCTTCCGGGCCTTHHHHHHHHHHHHH
T ss_pred             EEECCEEECCCCEEEechHHhcCChhhC-CCcccCCCCCCCcccccccCCCC-CcccCCCCCccCCCHHHHHHHHHHHHH
Confidence            9999999999999999999999999999 99999999999865332222234 789999999999999999999999999


Q ss_pred             HHHhhc-EEEeCCCCccCCCcceeeecCCCceEEEEe
Q 039293          476 MILRRY-KFTLSPNYVHSPVPRITLCPQHGIQVMLRA  511 (512)
Q Consensus       476 ~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  511 (512)
                      .|+++| ++++.++ ...+..+.+.+...+++|+++|
T Consensus       405 ~ll~~f~~~~l~~~-~~~~~~~~~~~~~~~lpv~~~~  440 (441)
T 3nc3_A          405 IVLDKMRNIRLEED-FCYAESGLYTRGPVSLLVAFDG  440 (441)
T ss_dssp             HHHHHSTTCEECTT-CCCCEECSSBCEESCCEEECC-
T ss_pred             HHHHhCcccEECCC-CcccccCccccCcceeEEEEec
Confidence            999999 9999865 2333344566777789999875


No 48 
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A*
Probab=100.00  E-value=1.9e-60  Score=462.61  Aligned_cols=370  Identities=17%  Similarity=0.229  Sum_probs=298.8

Q ss_pred             cccCchHHHHHHHHHh-CCeEEEec-CCeeEEEecCHHHHHHHHhcCCCCCCCch---hh-hH----hh--hcCceeccC
Q 039293           78 IFPITEPHIYSWIKLY-GTNFLMWH-GSQAELVVAEPKLIKEIMNNNRSFPKREP---RE-YL----KL--LGNGLVTTR  145 (512)
Q Consensus        78 ~~~~~~~~~~~~~~ky-G~vf~~~~-~~~~~vvv~dpe~i~~i~~~~~~~~~~~~---~~-~~----~~--~g~~l~~~~  145 (512)
                      +..+++..+.+| ++| |+||++++ |+.+.++|+|++.+++++.++. +.+...   .. ..    .+  .+.++++.+
T Consensus        22 ~~~~p~~~~~~l-~~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~   99 (412)
T 2zbx_A           22 CPYQLPDGYAQL-RDTPGPLHRVTLYDGRQAWVVTKHEAARKLLGDPR-LSSNRTDDNFPATSPRFEAVRESPQAFIGLD   99 (412)
T ss_dssp             STTSCCHHHHHH-HHSSSSEEEEECTTSCEEEEECSHHHHHHHHTCTT-EECCTTSTTSCCCSGGGC----CCCCGGGCC
T ss_pred             hccChHHHHHHH-HhcCCCeEeeccCCCCcEEEEecHHHHHHHHcCcc-cccCcccccccccccccccccccccccccCC
Confidence            334667889999 888 99999998 8889999999999999998754 322221   11 10    01  345788889


Q ss_pred             CchHHHHhhhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhcCCcccHHHHHH-HHhHhHhhhcccCccccccccHHHHH
Q 039293          146 GEKWLKKRKLAVNAFHAENLKNMIPDMIASVDMMLERWRDYEGKEIDAYREIK-VLTSEIISRTAFGSCYLEGENIFNML  224 (512)
Q Consensus       146 g~~w~~~Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~~~~vd~~~~~~-~~~~~~i~~~~fG~~~~~~~~~~~~~  224 (512)
                      |+.|+++|+++.+.|+..+++.+.+.+.+.++++++.|.+. ++++|+...+. .++.++++. +||.+.++.+.+....
T Consensus       100 g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~-g~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~~~~~~~~  177 (412)
T 2zbx_A          100 PPEHGTRRRMTISEFTVKRIKGMRPEVEEVVHGFLDEMLAA-GPTADLVSQFALPVPSMVICR-LLGVPYADHEFFQDAS  177 (412)
T ss_dssp             TTHHHHHHTTTGGGGSHHHHHHHHHHHHHHHHHHHHHHHHH-CSCEEHHHHTTTHHHHHHHHH-HHTCCGGGHHHHHHHH
T ss_pred             cHHHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHHHhc-CCCccHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999753 45899999886 489999997 6998765322222221


Q ss_pred             HHHHHHHHHhhhhcccccccccccCcchhhhHHHHHHHHHHHHHHHHHHhhhhhcccccccCCcHHHHHHHhcccccccc
Q 039293          225 TKMAYIVAKKKYKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKVVKKRESNVLTGEAESYGNDLLGILMRAYHSADETQ  304 (512)
Q Consensus       225 ~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~  304 (512)
                          ..+..     . +        .. ++..++.+.+.+++.+.+++++++        ...|+++.+++...+   +.
T Consensus       178 ----~~~~~-----~-~--------~~-~~~~~~~~~~~~~~~~~i~~r~~~--------~~~d~l~~ll~~~~~---~~  227 (412)
T 2zbx_A          178 ----KRLVQ-----S-T--------DA-QSALTARNDLAGYLDGLITQFQTE--------PGAGLVGALVADQLA---NG  227 (412)
T ss_dssp             ----HHHHH-----C-S--------SH-HHHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHHHTTTT---TT
T ss_pred             ----HHHhc-----c-C--------cH-HHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHHhccc---CC
Confidence                11111     0 0        11 455677788888999999887754        247999999987532   45


Q ss_pred             CCCHHHHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhCCCCCChhhhccchhHHHHHHhhhccCCC
Q 039293          305 KISLDDLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARKEVLELLGQQNPSADNISRLKIVGMIINETLRLYPP  384 (512)
Q Consensus       305 ~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~  384 (512)
                      .++++++.+++.++++||+|||+++++|++++|++||++|+|+++|+                 .|++|||+|+||++|+
T Consensus       228 ~ls~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~-----------------~~l~a~i~E~lRl~p~  290 (412)
T 2zbx_A          228 EIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRADR-----------------SLVPGAVEELLRYLAI  290 (412)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCG-----------------GGHHHHHHHHHHHHCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHhCh-----------------HhHHHHHHHHHHhCCc
Confidence            79999999999999999999999999999999999999999999974                 3799999999999999


Q ss_pred             Cc-cccceeccccccCCeeeCCCCEEEEccchhccCCCCcCCCCCCCCCCCCCCCCCccccCCCccccccCCCcccccch
Q 039293          385 FV-VFVREVKKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGEDFHLYKPERFAQGVPKATSNNMAAFLPFGLGPRTCVGF  463 (512)
Q Consensus       385 ~~-~~~R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~  463 (512)
                      ++ .++|.+.+|++++||.||||+.|+++.+++||||++| +||++|+||||-          . .++|||.|+|.|+|+
T Consensus       291 ~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~----------~-~~l~FG~G~r~C~G~  358 (412)
T 2zbx_A          291 ADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVY-EDPDALDIHRSA----------R-HHLAFGFGVHQCLGQ  358 (412)
T ss_dssp             CGGGCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTSCC----------T-TCCTTCCSTTSCTTH
T ss_pred             cccccceeeCCCeEECCEEECCCCEEEeChhhhcCCcccc-CCccccCCCCCC----------C-CccCCCCCCCcCccH
Confidence            99 4699999999999999999999999999999999999 999999999971          2 689999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhc-EEEeCCCC-ccCCCcceeeecCCCceEEEE
Q 039293          464 NFTIIEAKIALSMILRRY-KFTLSPNY-VHSPVPRITLCPQHGIQVMLR  510 (512)
Q Consensus       464 ~la~~~~~~~la~ll~~f-~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~  510 (512)
                      +||++|++++++.|+++| ++++.++. ......+.+.+.-..++|++.
T Consensus       359 ~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~g~~~lpv~~~  407 (412)
T 2zbx_A          359 NLARLELEVILNALMDRVPTLRLAVPVEQLVLRPGTTIQGVNELPVTWH  407 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHCTTCEESSCGGGSCBCCTTSCCCBSCCEEECC
T ss_pred             HHHHHHHHHHHHHHHHhcCcccccCCcccceeccccccCCcceeeeecc
Confidence            999999999999999999 79986432 222223334455556777653


No 49 
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A*
Probab=100.00  E-value=4.1e-61  Score=468.32  Aligned_cols=377  Identities=19%  Similarity=0.241  Sum_probs=308.1

Q ss_pred             cccCchHHHHHHHHHhCCeEEEecCCeeEEEecCHHHHHHHHhcCCCCCCCch-----hh-h---Hhh--h-cCceeccC
Q 039293           78 IFPITEPHIYSWIKLYGTNFLMWHGSQAELVVAEPKLIKEIMNNNRSFPKREP-----RE-Y---LKL--L-GNGLVTTR  145 (512)
Q Consensus        78 ~~~~~~~~~~~~~~kyG~vf~~~~~~~~~vvv~dpe~i~~i~~~~~~~~~~~~-----~~-~---~~~--~-g~~l~~~~  145 (512)
                      +..+++.++.++ ++||+||+ + ++.+.++++||+.+++++.+++ |.+++.     .. .   ..+  + +.++++.+
T Consensus        24 ~~~~p~~~~~~l-~~~Gpv~~-~-~~~~~vvv~~~~~v~~vl~~~~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~   99 (419)
T 1q5d_A           24 YAEDPFPAIERL-REATPIFY-W-DEGRSWVLTRYHDVSAVFRDER-FAVSREEWESSAEYSSAIPELSDMKKYGLFGLP   99 (419)
T ss_dssp             TTTCCHHHHHHH-HHHCSEEE-E-TTTTEEEECSHHHHHHHHTCTT-EECCGGGSTTHHHHHHSSGGGHHHHHHSTTTSC
T ss_pred             hhhChHHHHHHH-HhhCCccc-c-CCCCEEEEecHHHHHHHHcCCC-ccccccccccccccccccchhhhhcccccccCC
Confidence            345677888888 78999998 6 6778999999999999998876 766541     11 1   122  2 56788889


Q ss_pred             CchHHHHhhhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhcCCcccHHHHH-HHHhHhHhhhcccCccccccccHHHHH
Q 039293          146 GEKWLKKRKLAVNAFHAENLKNMIPDMIASVDMMLERWRDYEGKEIDAYREI-KVLTSEIISRTAFGSCYLEGENIFNML  224 (512)
Q Consensus       146 g~~w~~~Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~~~~vd~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~  224 (512)
                      |+.|+++|+++.+.|+...++.+.+.+.+.++++++.|.+.  +++|+...+ ..++.++++.+ ||.+.++.+.+....
T Consensus       100 g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~--~~~d~~~~~~~~~~~~vi~~~-fG~~~~~~~~~~~~~  176 (419)
T 1q5d_A          100 PEDHARVRKLVNPSFTSRAIDLLRAEIQRTVDQLLDARSGQ--EEFDVVRDYAEGIPMRAISAL-LKVPAECDEKFRRFG  176 (419)
T ss_dssp             HHHHHHHHHHHGGGGSHHHHGGGHHHHHHHHHHHHHHHTTS--SCEETTTTTGGGSHHHHHHHH-TTCCGGGHHHHHHHH
T ss_pred             chHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999753  589998654 89999999998 998876433333322


Q ss_pred             HHHHHHHHHhhhhcccccccccccCcchhhhHHHHHHHHHHHHHHHHHHhhhhhcccccccCC-cHHHHHHHhccccccc
Q 039293          225 TKMAYIVAKKKYKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKVVKKRESNVLTGEAESYGN-DLLGILMRAYHSADET  303 (512)
Q Consensus       225 ~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~-d~l~~ll~~~~~~~~~  303 (512)
                      ..+    ........+|+.    + ...++..++...+.+++.+.+++++++        ... |+++.|++...+   +
T Consensus       177 ~~~----~~~~~~~~~P~~----~-~~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~~dll~~ll~~~~~---~  236 (419)
T 1q5d_A          177 SAT----ARALGVGLVPRV----D-EETKTLVASVTEGLALLHGVLDERRRN--------PLENDVLTMLLQAEAD---G  236 (419)
T ss_dssp             HHH----HHHTTTTTSSCC----C-SCHHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSCHHHHHHHHHHS---S
T ss_pred             HHH----HHhcccccccCC----h-HHHHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCCHHHHHHhhhcc---C
Confidence            222    211111122321    1 123456777888899999999888754        235 999999987432   3


Q ss_pred             cCCCHHHHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhCCCCCChhhhccchhHHHHHHhhhccCC
Q 039293          304 QKISLDDLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARKEVLELLGQQNPSADNISRLKIVGMIINETLRLYP  383 (512)
Q Consensus       304 ~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p  383 (512)
                      ..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|+                 .|++|||+|+||++|
T Consensus       237 ~~l~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~-----------------~~l~a~i~E~lRl~p  299 (419)
T 1q5d_A          237 SRLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAEP-----------------GLMRNALDEVLRFDN  299 (419)
T ss_dssp             TTCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCG-----------------GGHHHHHHHHHHHSC
T ss_pred             CCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCH-----------------HHHHHHHHHHHHhCC
Confidence            569999999999999999999999999999999999999999999983                 489999999999999


Q ss_pred             CCc-cccceeccccccCCeeeCCCCEEEEccchhccCCCCcCCCCCCCCCCCCCCCCCccccCCCccccccCCCcccccc
Q 039293          384 PFV-VFVREVKKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGEDFHLYKPERFAQGVPKATSNNMAAFLPFGLGPRTCVG  462 (512)
Q Consensus       384 ~~~-~~~R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G  462 (512)
                      +++ .++|.+.+|++++||.||||+.|+++.+++||||++| +||++|+||||  +        . .++|||+|+|.|+|
T Consensus       300 ~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~--~--------~-~~l~FG~G~r~C~G  367 (419)
T 1q5d_A          300 ILRIGTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVF-SRPDVFDVRRD--T--------S-ASLAYGRGPHVCPG  367 (419)
T ss_dssp             SBSSEEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTS-SSTTSCCTTSC--C--------T-TCCTTCCGGGCCTT
T ss_pred             ccccccceeeCCCeEECCEEECCCCEEEecHHHhcCChhhC-CChhhcCCCCC--C--------C-CCCCCCCCCCcCcc
Confidence            999 6799999999999999999999999999999999999 99999999994  1        2 68999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhhc-EEEeCCCCccCCCcceeeecCCCceEEEEeC
Q 039293          463 FNFTIIEAKIALSMILRRY-KFTLSPNYVHSPVPRITLCPQHGIQVMLRAL  512 (512)
Q Consensus       463 ~~la~~~~~~~la~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  512 (512)
                      ++||++|++++++.|+++| ++++.++..  +....+.++..+++|++++|
T Consensus       368 ~~lA~~e~~~~la~ll~~f~~~~~~~~~~--~~~~~~~~~~~~l~v~~~~r  416 (419)
T 1q5d_A          368 VSLARLEAEIAVGTIFRRFPEMKLKETPV--FGYHPAFRNIESLNVILKPS  416 (419)
T ss_dssp             HHHHHHHHHHHHHHHHHHCTTCEECSCCE--ECCCSSBCCEEECEEESSCC
T ss_pred             HHHHHHHHHHHHHHHHHhCCCeEECCCcc--cccccccCCCceeEEEEecC
Confidence            9999999999999999999 799976522  22344567788999999887


No 50 
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A*
Probab=100.00  E-value=2.1e-61  Score=470.62  Aligned_cols=374  Identities=18%  Similarity=0.231  Sum_probs=297.6

Q ss_pred             CchHHHHHHHHHhCCeEEEecC--CeeEEEecCHHHHHHHHhcCCCCCCCch---------h-h-------hHhhhcCce
Q 039293           81 ITEPHIYSWIKLYGTNFLMWHG--SQAELVVAEPKLIKEIMNNNRSFPKREP---------R-E-------YLKLLGNGL  141 (512)
Q Consensus        81 ~~~~~~~~~~~kyG~vf~~~~~--~~~~vvv~dpe~i~~i~~~~~~~~~~~~---------~-~-------~~~~~g~~l  141 (512)
                      +++.++.++. +||+||++++|  +.+.++|+||+.+++++.++ .|.+++.         . .       ...+.|.++
T Consensus        21 ~p~~~~~~l~-~~Gpv~~~~~g~~~~~~~vv~~~~~v~~vl~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   98 (425)
T 2z3t_A           21 DPYPVYRRYR-EAAPVHRTASGPGKPDTYYVFTYDDVVRVLSNR-RLGRNARVASGDTDTAPVPIPTEHRALRTVVENWL   98 (425)
T ss_dssp             CCHHHHHHHH-HHCSEEEECCCSSCCCEEEECSHHHHHHHHHCT-TEESSCCCC---------------CHHHHHHTTCG
T ss_pred             ChHHHHHHHH-hcCCeEeccccCCCCCeEEEcCHHHHHHHHcCC-Ccccccccccccccccccccccccccccccccccc
Confidence            4567788885 59999999987  67799999999999999876 5644321         0 1       122334788


Q ss_pred             eccCCchHHHHhhhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhcCCcccHHHHH-HHHhHhHhhhcccCccccccccH
Q 039293          142 VTTRGEKWLKKRKLAVNAFHAENLKNMIPDMIASVDMMLERWRDYEGKEIDAYREI-KVLTSEIISRTAFGSCYLEGENI  220 (512)
Q Consensus       142 ~~~~g~~w~~~Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~~~~vd~~~~~-~~~~~~~i~~~~fG~~~~~~~~~  220 (512)
                      ++.+|+.|+++||++.+.|+...++.+.+.+.+.++++++.|.+.  +++|+..++ ..++.++++.+ ||.+.++.+.+
T Consensus        99 ~~~dg~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~--g~~dl~~~~~~~~~~~vi~~~-~G~~~~~~~~~  175 (425)
T 2z3t_A           99 VFLDPPHHTELRSLLTTEFSPSIVTGLRPRIAELASALLDRLRAQ--RRPDLVEGFAAPLPILVISAL-LGIPEEDHTWL  175 (425)
T ss_dssp             GGCCHHHHHHHHHHHHGGGSHHHHHHHHHHHHHHHHHHHHHHTTS--SSCBHHHHTTTHHHHHHHHHH-HTCCGGGHHHH
T ss_pred             ccCCchHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHhc--CCccHHHHHHHHHHHHHHHHH-hCCCHHHHHHH
Confidence            889999999999999999999999999999999999999999753  589998865 78999999998 99877533222


Q ss_pred             HHHHHHHHHHHHHhhhhcccccccccccCcchhhhHHHHHHHHHHHHHHHHHHhhhhhcccccccCCcHHHHHHHhcccc
Q 039293          221 FNMLTKMAYIVAKKKYKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKVVKKRESNVLTGEAESYGNDLLGILMRAYHSA  300 (512)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~  300 (512)
                      .    .+...+...  ...+|     ++....++..++.+.+.+++.+.+++++++        ...|+++.|++...+ 
T Consensus       176 ~----~~~~~~~~~--~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~dll~~ll~~~~~-  235 (425)
T 2z3t_A          176 R----ANAVALQEA--STTRA-----RDGRGYARAEAASQEFTRYFRREVDRRGGD--------DRDDLLTLLVRARDT-  235 (425)
T ss_dssp             H----HHHHHHHTT--CTTCC-----C---HHHHHHHHHHHHHHHHHHHHCC---------------CHHHHHHHHHHT-
T ss_pred             H----HHHHHHHhh--ccccC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHHhhcc-
Confidence            2    222222111  11112     112223455667777888888887766643        247999999977532 


Q ss_pred             ccccCCCHHHHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhCCCCCChhhhccchhHHHHHHhhhc
Q 039293          301 DETQKISLDDLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARKEVLELLGQQNPSADNISRLKIVGMIINETLR  380 (512)
Q Consensus       301 ~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~l~~l~a~i~E~lR  380 (512)
                        +..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|+                 .|++|||+|+||
T Consensus       236 --~~~ls~~el~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~-----------------~~l~a~i~E~lR  296 (425)
T 2z3t_A          236 --GSPLSVDGIVGTCVHLLTAGHETTTNFLAKAVLTLRAHRDVLDELRTTP-----------------ESTPAAVEELMR  296 (425)
T ss_dssp             --TCCCCHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHCHHHHHHHHHCG-----------------GGHHHHHHHHHH
T ss_pred             --CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhCh-----------------HhHHHHHHHHHH
Confidence              3568999999999999999999999999999999999999999999985                 289999999999


Q ss_pred             cCCCCccccceeccccccCCeeeCCCCEEEEccchhccCCCCcCCCCCCCCCCCCCCCCCccccCCCccccccCCCcccc
Q 039293          381 LYPPFVVFVREVKKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGEDFHLYKPERFAQGVPKATSNNMAAFLPFGLGPRTC  460 (512)
Q Consensus       381 l~p~~~~~~R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C  460 (512)
                      ++|++++++|.+.+|++++||.||||+.|+++.+++||||++| +||++|+||||.          . .++|||.|+|.|
T Consensus       297 l~p~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~----------~-~~l~FG~G~r~C  364 (425)
T 2z3t_A          297 YDPPVQAVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARF-PDPDVLDVHRAA----------E-RQVGFGLGIHYC  364 (425)
T ss_dssp             HSCSBCEEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTS-SSTTSCCTTSCS----------S-CCCTTCCSTTCC
T ss_pred             hCCcccCcceEeCCCeeECCEEECCCCEEEeChhhhCCCcccc-CCcccCCCCCCC----------C-CCCCCCCCCccC
Confidence            9999997799999999999999999999999999999999999 999999999995          1 689999999999


Q ss_pred             cchHHHHHHHHHHHHHHHhhc-EEEeCCCCccCCCcceeeecCCCceEEEEe
Q 039293          461 VGFNFTIIEAKIALSMILRRY-KFTLSPNYVHSPVPRITLCPQHGIQVMLRA  511 (512)
Q Consensus       461 ~G~~la~~~~~~~la~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  511 (512)
                      +|++||++|++++++.|+++| +++ .++....+....+.++..+++|++.+
T Consensus       365 ~G~~lA~~e~~~~la~ll~~f~~~~-~~~~~~~~~~~~~~~~~~~lpv~~~~  415 (425)
T 2z3t_A          365 LGATLARAEAEIGLRALLDGIPALG-RGAHEVEYADDMVFHGPTRLLLDLPD  415 (425)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHCGGGG-SSCEEEEECSCSSBCCEEEEEECCC-
T ss_pred             CCHHHHHHHHHHHHHHHHHhCCcCc-cCCCccccccccccCCcceeeEEecc
Confidence            999999999999999999999 899 76532222334456777788888765


No 51 
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Probab=100.00  E-value=2.5e-60  Score=461.50  Aligned_cols=370  Identities=16%  Similarity=0.204  Sum_probs=302.5

Q ss_pred             cccCchHHHHHHHHHhCCeEEEec-CCeeEEEecCHHHHHHHHhcCCCCCCCchh-h----hHh-hhcCceeccCCchHH
Q 039293           78 IFPITEPHIYSWIKLYGTNFLMWH-GSQAELVVAEPKLIKEIMNNNRSFPKREPR-E----YLK-LLGNGLVTTRGEKWL  150 (512)
Q Consensus        78 ~~~~~~~~~~~~~~kyG~vf~~~~-~~~~~vvv~dpe~i~~i~~~~~~~~~~~~~-~----~~~-~~g~~l~~~~g~~w~  150 (512)
                      +..+++.++.+| ++||+||++++ |+.+.++++||+.+++++.++ .|.++... .    ... ..+.++++.+|+.|+
T Consensus        35 ~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~i~~vl~~~-~f~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~  112 (417)
T 2y5n_A           35 HGLTLAGRYGEL-QETEPVSRVRPPYGEEAWLVTRYEDVRAVLGDG-RFVRGPSMTRDEPRTRPEMVKGGLLSMDPPEHS  112 (417)
T ss_dssp             SSCCCCHHHHHH-HHHCSEEEEECSBSCCEEEECSHHHHHHHHTCT-TEESGGGGTSCCCBSSSSCCCCSGGGCCTTHHH
T ss_pred             hccCchHHHHHH-HhcCCeEeeccCCCceEEEECCHHHHHHHHcCC-CcccCccccccccccCcccccccCccCCchHHH
Confidence            334667889999 89999999997 788999999999999999875 35444322 1    112 135678888999999


Q ss_pred             HHhhhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhcCC-cccHHHHHH-HHhHhHhhhcccCccccccccHHHHHHHHH
Q 039293          151 KKRKLAVNAFHAENLKNMIPDMIASVDMMLERWRDYEGK-EIDAYREIK-VLTSEIISRTAFGSCYLEGENIFNMLTKMA  228 (512)
Q Consensus       151 ~~Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~~~-~vd~~~~~~-~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~  228 (512)
                      ++|+++.+.|+...++.+.+.+.+.++++++.|...  + ++|+..++. .++.++++. +||.+.++.+.    +..+.
T Consensus       113 ~~R~~l~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~--~~~vdl~~~~~~~~~~~vi~~-~~G~~~~~~~~----~~~~~  185 (417)
T 2y5n_A          113 RLRRLVVKAFTARRAESLRPRAREIAHELVDQMAAT--GQPADLVAMFARQLPVRVICE-LLGVPSADHDR----FTRWS  185 (417)
T ss_dssp             HHHHHHHHHSCHHHHHHTHHHHHHHHHHHHHHHHHH--CSSEEHHHHTTTTHHHHHHHH-HHTCCGGGHHH----HHHHH
T ss_pred             HHHHHHhhhcCHHHHHHHHHHHHHHHHHHHHHHHhC--CCCeeHHHHHHHHhHHHHHHH-HcCCCHHHHHH----HHHHH
Confidence            999999999999999999999999999999999753  5 899998774 699999998 68987653221    11111


Q ss_pred             HHHHHhhhhcccccccccccCcchhhhHHHHHHHHHHHHHHHHHHhhhhhcccccccCCcHHHHHHHhccccccccCCCH
Q 039293          229 YIVAKKKYKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKVVKKRESNVLTGEAESYGNDLLGILMRAYHSADETQKISL  308 (512)
Q Consensus       229 ~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~  308 (512)
                         ...     +... .    ...++..++.+.+.+++.+.++++++.        ...|+++.++++..+   +..+++
T Consensus       186 ---~~~-----~~~~-~----~~~~~~~~~~~~l~~~~~~~i~~r~~~--------~~~dll~~ll~~~~~---~~~ls~  241 (417)
T 2y5n_A          186 ---GAF-----LSTA-E----VTAEEMQEAAEQAYAYMGDLIDRRRKE--------PTDDLVSALVQARDQ---QDSLSE  241 (417)
T ss_dssp             ---HTT-----STTC-C----CCHHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHHHCCBT---TBCCCH
T ss_pred             ---HHH-----hccc-C----CCHHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHhhhcc---CCCCCH
Confidence               110     1000 0    112456677888889999999887754        246999999987532   457999


Q ss_pred             HHHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhCCCCCChhhhccchhHHHHHHhhhccCCCCc--
Q 039293          309 DDLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARKEVLELLGQQNPSADNISRLKIVGMIINETLRLYPPFV--  386 (512)
Q Consensus       309 ~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~--  386 (512)
                      +++.+++..+++||+|||+++++|++++|++||++|+|+++|+                 .|++|||+|+||++|+++  
T Consensus       242 ~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~-----------------~~l~a~i~E~lRl~p~~~~~  304 (417)
T 2y5n_A          242 QELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLLDRP-----------------ELIPSAVEELTRWVPLGVGT  304 (417)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCG-----------------GGHHHHHHHHHHHCCCBSSC
T ss_pred             HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHCHHHHHHHHhCH-----------------HHHHHHHHHHHHhcCCcccc
Confidence            9999999999999999999999999999999999999999984                 379999999999999999  


Q ss_pred             cccceeccccccCCeeeCCCCEEEEccchhccCCCCcCCCCCCCCCCCCCCCCCccccCCCccccccCCCcccccchHHH
Q 039293          387 VFVREVKKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGEDFHLYKPERFAQGVPKATSNNMAAFLPFGLGPRTCVGFNFT  466 (512)
Q Consensus       387 ~~~R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la  466 (512)
                      .++|.+.+|++++||.||||+.|+++.+++||||++| +||++|+||||.          . .++|||.|+|.|+|++||
T Consensus       305 ~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~----------~-~~lpFG~G~r~C~G~~lA  372 (417)
T 2y5n_A          305 AFPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQF-PDADRIDVDRTP----------N-QHLGFGHGVHHCLGAPLA  372 (417)
T ss_dssp             CSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTS-TTTTSCCTTCSS----------C-CCCTTCCSTTSCTTHHHH
T ss_pred             ccceEeCCCEEECCEEECCCCEEEeChhhhCCCcccC-CCccccCCCCCC----------C-CcCCCCCCCcCCcCHHHH
Confidence            6799999999999999999999999999999999999 999999999983          1 689999999999999999


Q ss_pred             HHHHHHHHHHHHhhc-EEEeCCC-CccCCCcceeeecCCCceEEE
Q 039293          467 IIEAKIALSMILRRY-KFTLSPN-YVHSPVPRITLCPQHGIQVML  509 (512)
Q Consensus       467 ~~~~~~~la~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~v~~  509 (512)
                      ++|++++++.|+++| ++++.++ .........+.+...+++|++
T Consensus       373 ~~e~~~~la~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~  417 (417)
T 2y5n_A          373 RVELQVALEVLLQRLPGIRLGIPETQLRWSEGMLLRGPLELPVVW  417 (417)
T ss_dssp             HHHHHHHHHHHHHHCTTCEESSCGGGCCBCCCSSBCCBSCCEEEC
T ss_pred             HHHHHHHHHHHHHhCCCcEeCCCCccceeccCcccCCcceeEEeC
Confidence            999999999999999 5998754 222233345556777788864


No 52 
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis}
Probab=100.00  E-value=6.6e-61  Score=465.47  Aligned_cols=370  Identities=15%  Similarity=0.176  Sum_probs=300.4

Q ss_pred             cCchHHHHHHHHHhCCeEEEec-CCeeEEEecCHHHHHHHHhcCCCCCCCch---hh----hHh---hhcCceeccCCch
Q 039293           80 PITEPHIYSWIKLYGTNFLMWH-GSQAELVVAEPKLIKEIMNNNRSFPKREP---RE----YLK---LLGNGLVTTRGEK  148 (512)
Q Consensus        80 ~~~~~~~~~~~~kyG~vf~~~~-~~~~~vvv~dpe~i~~i~~~~~~~~~~~~---~~----~~~---~~g~~l~~~~g~~  148 (512)
                      .+++..+.+| ++||+||++++ |+.+.++++||+.+++++.++. +.+...   ..    ...   ..+.++++.+|+.
T Consensus        24 ~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~  101 (408)
T 3abb_A           24 YQPPKAYEER-RGESPLTQVTLFDGRPAWLITGHAEGRALLVDPR-LSSDWGHPDFPVVVRRTEDRGGLAFPLIGVDDPV  101 (408)
T ss_dssp             TSCCHHHHHH-CCSSSEEEEECTTSCEEEEECCHHHHHHHHTCTT-EECCTTSTTCCCCC---------CCTTTTCCTTH
T ss_pred             cCchHHHHHH-HhcCCeeeeecCCCCcEEEEeCHHHHHHHHcCCC-cccccccccccccccCCccccccccccccCCchH
Confidence            4567788999 89999999998 8889999999999999998754 322211   00    111   1345788889999


Q ss_pred             HHHHhhhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhcCCcccHHHHHH-HHhHhHhhhcccCccccccccHHHHHHHH
Q 039293          149 WLKKRKLAVNAFHAENLKNMIPDMIASVDMMLERWRDYEGKEIDAYREIK-VLTSEIISRTAFGSCYLEGENIFNMLTKM  227 (512)
Q Consensus       149 w~~~Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~~~~vd~~~~~~-~~~~~~i~~~~fG~~~~~~~~~~~~~~~~  227 (512)
                      |+++|+++.+.|+..+++.+.+.+.+.++++++.|... ++++|+..++. .++.++++. +||.+.++.+.+.....  
T Consensus       102 h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~-g~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~~~~~~~~~--  177 (408)
T 3abb_A          102 HARQRRMLIPSFGVKRMNAIRPRLQSLVDRLLDDMLAK-GPGADLVSAFALPVPSVAICE-LLGVPYGDHDFFEECSR--  177 (408)
T ss_dssp             HHHHHHHHGGGGCHHHHHHHHHHHHHHHHHHHHHHHHT-CSCEEHHHHTTTHHHHHHHHH-HHTCCGGGHHHHHHHHH--
T ss_pred             HHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeehHHHHHHHHHHHHHHH-HhCCCHHHHHHHHHHHH--
Confidence            99999999999999999999999999999999999852 35899999886 488999997 69987653222222111  


Q ss_pred             HHHHHHhhhhcccccccccccCcchhhhHHHHHHHHHHHHHHHHHHhhhhhcccccccCCcHHHHHHHhccccccccCCC
Q 039293          228 AYIVAKKKYKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKVVKKRESNVLTGEAESYGNDLLGILMRAYHSADETQKIS  307 (512)
Q Consensus       228 ~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~  307 (512)
                        .+.    .  .+      .  . ++..++.+.+.+++.+.+++++++        ...|+++.|+++..+   +..++
T Consensus       178 --~~~----~--~~------~--~-~~~~~~~~~~~~~~~~~i~~r~~~--------~~~d~l~~ll~~~~~---~~~ls  229 (408)
T 3abb_A          178 --NFV----G--AA------T--S-AEADAAFGELYTYLHGLVGRKQAE--------PEDGLLDELIARQLE---EGDLD  229 (408)
T ss_dssp             --HHC---------------------CCSSHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHHHHHHT---SSSCC
T ss_pred             --HHh----c--cc------c--h-HHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHhcccC---CCCCC
Confidence              110    0  00      0  1 334556777888889988887754        246999999987532   35699


Q ss_pred             HHHHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhCCCCCChhhhccchhHHHHHHhhhccCCCCcc
Q 039293          308 LDDLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARKEVLELLGQQNPSADNISRLKIVGMIINETLRLYPPFVV  387 (512)
Q Consensus       308 ~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~  387 (512)
                      ++++.+++.++++||+|||+++++|++++|++||++|+|+++|++                 |++|||+|+||++|++++
T Consensus       230 ~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~-----------------~l~a~i~E~lRl~p~~~~  292 (408)
T 3abb_A          230 HDEVVMIALVLLVAGHETTVNAIALGALTLIQHPEQIDVLLRDPG-----------------AVSGVVEELLRFTSVSDH  292 (408)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGGGGGGSCHH-----------------HHHHHHHHHHHHHCSSCE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhCHH-----------------hHHHHHHHHHHhcCcccc
Confidence            999999999999999999999999999999999999999998753                 699999999999999997


Q ss_pred             ccceeccccccCCeeeCCCCEEEEccchhccCCCCcCCCCCCCCCCCCCCCCCccccCCCccccccCCCcccccchHHHH
Q 039293          388 FVREVKKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGEDFHLYKPERFAQGVPKATSNNMAAFLPFGLGPRTCVGFNFTI  467 (512)
Q Consensus       388 ~~R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~  467 (512)
                      ++|.+.+|++++||.||||+.|+++.+++||||++| +||++|+||||-          . .++|||.|+|.|+|++||+
T Consensus       293 ~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dp~~F~PeR~~----------~-~~~~FG~G~r~C~G~~lA~  360 (408)
T 3abb_A          293 IVRMAKEDIEVGGATIKAGDAVLVSITLMNRDAKAY-ENPDIFDARRNA----------R-HHVGFGHGIHQCLGQNLAR  360 (408)
T ss_dssp             EEEEESSCEEETTEEECTTCEEEEEHHHHHTCTTTS-SSTTSCCTTSCC----------T-TCCTTCCGGGCCTTHHHHH
T ss_pred             cceEeCCCeEECCEEECCCCEEEeChHHhcCCcccC-CCcccCCCCCCC----------C-CCCCCCCCCcCCcCHHHHH
Confidence            799999999999999999999999999999999999 999999999961          2 6899999999999999999


Q ss_pred             HHHHHHHHHHHhhc-EEEeCCC-CccCCCcceeeecCCCceEEEEeC
Q 039293          468 IEAKIALSMILRRY-KFTLSPN-YVHSPVPRITLCPQHGIQVMLRAL  512 (512)
Q Consensus       468 ~~~~~~la~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~r  512 (512)
                      +|++++++.|+++| ++++.++ .........+.++..+++|++.+|
T Consensus       361 ~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~lpv~~~~~  407 (408)
T 3abb_A          361 AELEIALGGLFARIPGLRLAVPLDEVPIKAGHDAQGPIELPVVWHHH  407 (408)
T ss_dssp             HHHHHHHHHHHHHCTTCEESSCGGGSCBCCTTSCCSBSCCEEECSCC
T ss_pred             HHHHHHHHHHHHhCccceecCCccccccccCcccCCcceeEEEeCCC
Confidence            99999999999999 7998643 222223344567888999999876


No 53 
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Probab=100.00  E-value=5.2e-61  Score=465.30  Aligned_cols=367  Identities=14%  Similarity=0.200  Sum_probs=302.6

Q ss_pred             chHHHHHHHHHhCCeEEEecCC--eeEEEecCHHHHHHHHhcCCCCCCCchhh-----hHhhh---cCceeccCCchHHH
Q 039293           82 TEPHIYSWIKLYGTNFLMWHGS--QAELVVAEPKLIKEIMNNNRSFPKREPRE-----YLKLL---GNGLVTTRGEKWLK  151 (512)
Q Consensus        82 ~~~~~~~~~~kyG~vf~~~~~~--~~~vvv~dpe~i~~i~~~~~~~~~~~~~~-----~~~~~---g~~l~~~~g~~w~~  151 (512)
                      ++.++.+++ +||+||++++++  .+.+++++|+.+++++.+. .|.++....     ...+.   +.++++.+|+.|++
T Consensus        29 p~~~~~~l~-~~Gpv~~~~~~~g~~~~~vv~~~~~v~~vl~~~-~f~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~~  106 (411)
T 2dkk_A           29 FDPVLAELM-REGPLTRVRLPHGEGWAWLATRYDDVKAITNDP-RFGRAEVTQRQITRLAPHFKPRPGSLAFADQPDHNR  106 (411)
T ss_dssp             CCHHHHHHH-TTCSEEEEECSBSBSCEEEECSHHHHHHHTTCT-TEESGGGGGSCBCBSSSCCCCCTTCSTTCCTTHHHH
T ss_pred             ccHHHHHHH-hcCCeEeeecCCCceeEEEEcCHHHHHHHHcCC-CcccCCCCCCCccccccchhccccccccCCchHHHH
Confidence            347788887 899999999765  7799999999999999874 565543321     11222   66788889999999


Q ss_pred             HhhhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhcCCcccHHHHHH-HHhHhHhhhcccCccccccccHHHHHHHHHHH
Q 039293          152 KRKLAVNAFHAENLKNMIPDMIASVDMMLERWRDYEGKEIDAYREIK-VLTSEIISRTAFGSCYLEGENIFNMLTKMAYI  230 (512)
Q Consensus       152 ~Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~~~~vd~~~~~~-~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~  230 (512)
                      +|+++.+.|+...++.+.+.+.+.++++++.|.+. ++++|+..++. .++.++++. +||.+.++.+    .+..+.  
T Consensus       107 ~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~-g~~~dl~~~~~~~~~~~vi~~-l~G~~~~~~~----~~~~~~--  178 (411)
T 2dkk_A          107 LRRAVAGAFTVGATKRLRPRAQEILDGLVDGILAE-GPPADLVERVLEPFPIAVVSE-VMGVPAADRE----RVHSWT--  178 (411)
T ss_dssp             HHHHHGGGSSHHHHHHHHHHHHHHHHHHHHHHHHH-CSCEEHHHHTTTHHHHHHHHH-HHTCCSSHHH----HHHHHH--
T ss_pred             HHHHhhHhhCHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeehHHHHHHHHHHHHHHH-HhCCCHHHHH----HHHHHH--
Confidence            99999999999999999999999999999999864 33899998876 699999998 5998765321    111111  


Q ss_pred             HHHhhhhcccccccccccCcchhhhHHHHHHHHHHHHHHHHHHhhhhhcccccccCCcHHHHHHHhccccccccCCCHHH
Q 039293          231 VAKKKYKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKVVKKRESNVLTGEAESYGNDLLGILMRAYHSADETQKISLDD  310 (512)
Q Consensus       231 ~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~  310 (512)
                       ..     .+..    .+  ..++..++...+.+++.+.+++++++        ...|+++.|+++ . +  +..+++++
T Consensus       179 -~~-----~~~~----~~--~~~~~~~~~~~l~~~~~~~i~~r~~~--------~~~dll~~ll~~-~-~--~~~ls~~e  234 (411)
T 2dkk_A          179 -RQ-----IIST----SG--GAEAAERAKRGLYGWITETVRARAGS--------EGGDVYSMLGAA-V-G--RGEVGETE  234 (411)
T ss_dssp             -GG-----GCSS----CS--CSHHHHHHHHHHHHHHHHHHHTTTTC--------CSSCHHHHHHHH-H-H--TTSSCTTS
T ss_pred             -HH-----HHhc----cc--hHHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHHh-c-C--CCCCCHHH
Confidence             11     0110    01  23456677788888888888877654        346999999987 2 2  45789999


Q ss_pred             HHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhCCCCCChhhhccchhHHHHHHhhhccCCCCc-c-c
Q 039293          311 LIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARKEVLELLGQQNPSADNISRLKIVGMIINETLRLYPPFV-V-F  388 (512)
Q Consensus       311 i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~-~-~  388 (512)
                      +.+++..+++|| |||+++++|++++|++||++|+|+++|+                 .|++|||+|+||++|+++ . +
T Consensus       235 l~~~~~~l~~AG-eTta~~l~~~l~~L~~~P~~~~~l~~E~-----------------~~l~a~i~E~lRl~p~~~~~~~  296 (411)
T 2dkk_A          235 AVGLAGPLQIGG-EAVTHNVGQMLYLLLTRRELMARMRERP-----------------GARGTALDELLRWISHRTSVGL  296 (411)
T ss_dssp             HHHHHHHHHHTH-HHHHHHHHHHHHHHHHSHHHHHHHHHCT-----------------TCCHHHHHHHHHHSCCBSSCCC
T ss_pred             HHHHHHHHHHhh-HHHHHHHHHHHHHHHhCHHHHHHHHhCH-----------------HHHHHHHHHHHhhCCccccCcc
Confidence            999999999999 9999999999999999999999999985                 279999999999999999 7 8


Q ss_pred             cceeccccccCCeeeCCCCEEEEccchhccCCCCcCCCCCCCCCCCCCCCCCccccCCCccccccCCCcccccchHHHHH
Q 039293          389 VREVKKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGEDFHLYKPERFAQGVPKATSNNMAAFLPFGLGPRTCVGFNFTII  468 (512)
Q Consensus       389 ~R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~  468 (512)
                      +|.+.+|++++||.||||+.|+++.+++||||++| +||++|+||||.          . .++|||+|+|.|+|++||++
T Consensus       297 ~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f-~dp~~F~PeR~~----------~-~~l~FG~G~r~C~G~~lA~~  364 (411)
T 2dkk_A          297 ARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVF-PDPDRIDLDRDP----------N-PHLAYGNGHHFCTGAVLARM  364 (411)
T ss_dssp             CEEESSCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCCSCSS----------C-CCCTTCCSTTSCTTHHHHHH
T ss_pred             ceEECCCEEECCEEECCCCEEEeChhhhcCChhhC-CCCCCCCCCCCC----------C-CCCCCCCCCCCCcCHHHHHH
Confidence            99999999999999999999999999999999999 999999999995          1 68999999999999999999


Q ss_pred             HHHHHHHHHHhhc-EEEeCCCC-ccCCCcceeeecCCCceEEEEeC
Q 039293          469 EAKIALSMILRRY-KFTLSPNY-VHSPVPRITLCPQHGIQVMLRAL  512 (512)
Q Consensus       469 ~~~~~la~ll~~f-~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~r  512 (512)
                      |++++++.|+++| ++++.++. ...+....+.++..+++|++++|
T Consensus       365 e~~~~l~~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~~~R  410 (411)
T 2dkk_A          365 QTELLVDTLLERLPGLRLAVPAEQVAWRRKTMIRGPRTLPCTWHHH  410 (411)
T ss_dssp             HHHHHHHHHHHHSTTCEESSCGGGCCBCCSSSBCCBSCCEEECCCC
T ss_pred             HHHHHHHHHHHHCCCcEECCCccccccccCcccCCcceeEEEeccC
Confidence            9999999999999 89997652 22223345567788999999987


No 54 
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A*
Probab=100.00  E-value=5.2e-60  Score=461.84  Aligned_cols=373  Identities=14%  Similarity=0.169  Sum_probs=304.5

Q ss_pred             CchHHHHHHHHHhCCeEEEecC-------CeeEEEecCHHHHHHHHhcCCCCCCCch---h-hhHhh--hcCceeccCCc
Q 039293           81 ITEPHIYSWIKLYGTNFLMWHG-------SQAELVVAEPKLIKEIMNNNRSFPKREP---R-EYLKL--LGNGLVTTRGE  147 (512)
Q Consensus        81 ~~~~~~~~~~~kyG~vf~~~~~-------~~~~vvv~dpe~i~~i~~~~~~~~~~~~---~-~~~~~--~g~~l~~~~g~  147 (512)
                      +++.++.+|. +||+||+++++       +.+.++|+||+.+++++.+++.|.+++.   . ....+  .+.++++.+|+
T Consensus        45 ~p~~~~~~l~-~~Gpv~~~~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~~~l~~~dg~  123 (435)
T 2wm5_A           45 VRDGAFATLR-REAPISFWPTIELPGFVAGNGHWALTKYDDVFYASRHPDIFSSYPNITINDQTPELAEYFGSMIVLDDP  123 (435)
T ss_dssp             HHHHHHHHHH-HHCSEEEECCCCC---CCCCCEEEECSHHHHHHHHHCTTTEECSSCCSSSCCCHHHHHHHHGGGGCCTT
T ss_pred             ChhHHHHHHH-hcCCeEecccccccccCCCCCeEEEcCHHHHHHHHcCcccccCccccccCccccchhhhccccccCCcH
Confidence            3466788885 69999999986       6679999999999999988656755431   1 12222  36778888999


Q ss_pred             hHHHHhhhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhcC-CcccHHHHH-HHHhHhHhhhcccCccccccccHHHHHH
Q 039293          148 KWLKKRKLAVNAFHAENLKNMIPDMIASVDMMLERWRDYEG-KEIDAYREI-KVLTSEIISRTAFGSCYLEGENIFNMLT  225 (512)
Q Consensus       148 ~w~~~Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~~-~~vd~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~  225 (512)
                      .|+++|+++.+.|+...++.+.+.+.+.++++++.|.+..+ +++|+..++ ..++.++++.+ ||.+.++.+.+.+.. 
T Consensus       124 ~h~~~R~~l~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~vd~~~~~~~~~~~~vi~~~-~G~~~~~~~~~~~~~-  201 (435)
T 2wm5_A          124 RHQRLRSIVSRAFTPKVVARIEAAVRDRAHRLVSSMIANNPDRQADLVSELAGPLPLQIICDM-MGIPKADHQRIFHWT-  201 (435)
T ss_dssp             HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEHHHHTTTHHHHHHHHHH-HTCCGGGHHHHHHHH-
T ss_pred             HHHHHHHHhHHhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcEehHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHH-
Confidence            99999999999999999999999999999999999986532 289999876 78999999999 999876433332222 


Q ss_pred             HHHHHHHHhhhhcccccccccccCcchhhhHHHHHHHHHHHHHHHHHHhhhhhcccccccCCcHHHHHHHhccccccccC
Q 039293          226 KMAYIVAKKKYKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKVVKKRESNVLTGEAESYGNDLLGILMRAYHSADETQK  305 (512)
Q Consensus       226 ~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~  305 (512)
                         ..+..    ...|.+   .+  ..++..++.+.+.+++.+.+++++++        ...|+++.|++...+   +..
T Consensus       202 ---~~~~~----~~~p~~---~~--~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~dll~~ll~~~~~---~~~  258 (435)
T 2wm5_A          202 ---NVILG----FGDPDL---AT--DFDEFMQVSADIGAYATALAEDRRVN--------HHDDLTSSLVEAEVD---GER  258 (435)
T ss_dssp             ---HHHHH----TTCTTS---CC--CHHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHHHCCBT---TBC
T ss_pred             ---HHHhc----cCCcch---hh--hHHHHHHHHHHHHHHHHHHHHHHhcC--------CCCCHHHHHHhhhcc---CCC
Confidence               22111    112432   11  23456777888899999999888764        347999999977432   356


Q ss_pred             CCHHHHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhCCCCCChhhhccchhHHHHHHhhhccCCCC
Q 039293          306 ISLDDLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARKEVLELLGQQNPSADNISRLKIVGMIINETLRLYPPF  385 (512)
Q Consensus       306 l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~  385 (512)
                      ++++++..++..+++||+|||+++++|++++|++||++|+|+++|++                +|++|||+|+||++|++
T Consensus       259 ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~----------------~~l~a~i~E~lRl~p~~  322 (435)
T 2wm5_A          259 LSSREIASFFILLVVAGNETTRNAITHGVLALSRYPEQRDRWWSDFD----------------GLAPTAVEEIVRWASPV  322 (435)
T ss_dssp             CCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHSHH----------------HHHHHHHHHHHHHHCSB
T ss_pred             CCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCHHHHHHHhChH----------------hHHHHHHHHHHhhcCcc
Confidence            99999999999999999999999999999999999999999999975                37999999999999999


Q ss_pred             ccccceeccccccCCeeeCCCCEEEEccchhccCCCCcCCCCCCCCCCCCCCCCCccccCCCccccccCC-CcccccchH
Q 039293          386 VVFVREVKKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGEDFHLYKPERFAQGVPKATSNNMAAFLPFGL-GPRTCVGFN  464 (512)
Q Consensus       386 ~~~~R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~-G~r~C~G~~  464 (512)
                      +.++|.+.+|++++||.||||+.|+++.+++||||++| +||++|+|||+  +        . .++|||. |+|.|+|++
T Consensus       323 ~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f-~dP~~F~PeR~--~--------~-~~lpFG~~G~r~C~G~~  390 (435)
T 2wm5_A          323 VYMRRTLTQDIELRGTKMAAGDKVSLWYCSANRDESKF-ADPWTFDLARN--P--------N-PHLGFGGGGAHFCLGAN  390 (435)
T ss_dssp             CCEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTCCCTTCC--S--------C-CCCTTCSSSTTCCTTHH
T ss_pred             cCcceEeCCCeeECCEEECCCCEEEeCHHHhcCCcccC-cCCCccCCCCC--C--------C-CCCCCCCCCCCCCCCHH
Confidence            97799999999999999999999999999999999999 99999999993  1        2 6899999 999999999


Q ss_pred             HHHHHHHHHHHHHHhhcE-EEeCCCCccCCCcceeeecCCCceEEE
Q 039293          465 FTIIEAKIALSMILRRYK-FTLSPNYVHSPVPRITLCPQHGIQVML  509 (512)
Q Consensus       465 la~~~~~~~la~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~v~~  509 (512)
                      ||++|++++++.||++|+ +++.++...  ......+...+++|++
T Consensus       391 lA~~e~~~~la~ll~~f~~~~l~~~~~~--~~~~~~~~~~~lpv~~  434 (435)
T 2wm5_A          391 LARREIRVAFDELRRQMPDVVATEEPAR--LLSQFIHGIKTLPVTW  434 (435)
T ss_dssp             HHHHHHHHHHHHHHHHCTTCEECSCCEE--CCCSSBCCEEECEEEC
T ss_pred             HHHHHHHHHHHHHHHhCCccEECCCccc--cccccccCccceeEEe
Confidence            999999999999999997 999753222  2223445556677765


No 55 
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena}
Probab=100.00  E-value=3.6e-60  Score=460.07  Aligned_cols=369  Identities=17%  Similarity=0.256  Sum_probs=298.9

Q ss_pred             cCchHHHHHHHHHhCCeEEEec-CCeeEEEecCHHHHHHHHhcCCCCCCCchhh-------hHhhh-----cCc-eeccC
Q 039293           80 PITEPHIYSWIKLYGTNFLMWH-GSQAELVVAEPKLIKEIMNNNRSFPKREPRE-------YLKLL-----GNG-LVTTR  145 (512)
Q Consensus        80 ~~~~~~~~~~~~kyG~vf~~~~-~~~~~vvv~dpe~i~~i~~~~~~~~~~~~~~-------~~~~~-----g~~-l~~~~  145 (512)
                      .+++.++.+|. +||+||++++ |+.+.++++||+.+++++.++ .|.++....       ...+.     |.+ +++.+
T Consensus        22 ~~p~~~~~~l~-~~Gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~   99 (413)
T 2z36_A           22 FAPPAAYERLR-ERAPINKVRLTSGGQAWWVSGHEEARAVLADG-RFSSDKRKDGFPLFTLDAATLQQLRSQPPLMLGMD   99 (413)
T ss_dssp             TBCCHHHHHHH-HHCSEEEEEETTSCEEEEECSHHHHHHHHHCT-TEECCTTSTTCCCSSCCHHHHHHHTTSCCCGGGCC
T ss_pred             cCchHHHHHHH-HcCCeeEeecCCCceEEEEecHHHHHHHHcCC-CcccCccccCccccccccccccccccccccccccC
Confidence            35677888886 7899999997 888999999999999999875 454432111       12332     677 88889


Q ss_pred             CchHHHHhhhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhcCCcccHHHHHH-HHhHhHhhhcccCccccccccHHHHH
Q 039293          146 GEKWLKKRKLAVNAFHAENLKNMIPDMIASVDMMLERWRDYEGKEIDAYREIK-VLTSEIISRTAFGSCYLEGENIFNML  224 (512)
Q Consensus       146 g~~w~~~Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~~~~vd~~~~~~-~~~~~~i~~~~fG~~~~~~~~~~~~~  224 (512)
                      |+.|+++|+++.+.|+...++++.+.+.+.++++++.|.+..++++|+...+. .++.++++.+ ||.+.++.+.    +
T Consensus       100 g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~d~~~~~~~~~~~~vi~~~-~G~~~~~~~~----~  174 (413)
T 2z36_A          100 GAEHSAARRPVIGEFTVKRLAALRPRIQDIVDHFIDDMLATDQRPVDLVQALSLPVPSLVICEL-LGVPYTDHDF----F  174 (413)
T ss_dssp             HHHHHHHHHHHHGGGSHHHHHHHHHHHHHHHHHHHHHHTTCSCSSEEHHHHTTTHHHHHHHHHH-HTCCGGGHHH----H
T ss_pred             chHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHhhhhHHHHHHHH-hCCCHHHHHH----H
Confidence            99999999999999999999999999999999999999743246899987765 6999999985 8987653221    1


Q ss_pred             HHHHHHHHHhhhhcccccccccccCcchhhhHHHHHHHHHHHHHHHHHHhhhhhcccccccCCcHHHHHHHhcccccccc
Q 039293          225 TKMAYIVAKKKYKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKVVKKRESNVLTGEAESYGNDLLGILMRAYHSADETQ  304 (512)
Q Consensus       225 ~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~  304 (512)
                      ..+...        .+...   .+    ++..++.+.+.+++.+.+++++++        ...|+++.+++...+   +.
T Consensus       175 ~~~~~~--------~~~~~---~~----~~~~~~~~~~~~~~~~~i~~r~~~--------~~~dll~~ll~~~~~---~~  228 (413)
T 2z36_A          175 QSRTTM--------MVSRT---SM----EDRRRAFAELRAYIDDLITRKESE--------PGDDLFSRQIARQRQ---EG  228 (413)
T ss_dssp             HHHHHH--------TTCSS---CH----HHHHHHHHHHHHHHHHHHHHHHSS--------CCSSHHHHHHHHHHH---HS
T ss_pred             HHHHHH--------Hhccc---Cc----HHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHHhhcC---CC
Confidence            111111        11111   01    456677788888999998887754        246999999976421   35


Q ss_pred             CCCHHHHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhCCCCCChhhhccchhHHHHHHhhhccCCC
Q 039293          305 KISLDDLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARKEVLELLGQQNPSADNISRLKIVGMIINETLRLYPP  384 (512)
Q Consensus       305 ~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~  384 (512)
                      .++++++.+++..+++||+|||+++++|++++|++||++|+|+++|+                 .|++|||+|+||++|+
T Consensus       229 ~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~-----------------~~l~a~i~E~lRl~p~  291 (413)
T 2z36_A          229 TLDHAGLVSLAFLLLTAGHETTANMISLGVVGLLSHPEQLTVVKANP-----------------GRTPMAVEELLRYFTI  291 (413)
T ss_dssp             CCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCG-----------------GGHHHHHHHHHHHHCT
T ss_pred             CCCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHhCHHHHHHHHhCh-----------------HHHHHHHHHHHHhCCC
Confidence            79999999999999999999999999999999999999999999985                 3799999999999999


Q ss_pred             Cc-cccceeccccccCCeeeCCCCEEEEccchhccCCCCcCCCCCCCCCCCCCCCCCccccCCCccccccCCCcccccch
Q 039293          385 FV-VFVREVKKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGEDFHLYKPERFAQGVPKATSNNMAAFLPFGLGPRTCVGF  463 (512)
Q Consensus       385 ~~-~~~R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~  463 (512)
                      ++ .++|.+.+|++++||.||||+.|+++.+++||||++| +||++|+||||.          . .++|||.|+|.|+|+
T Consensus       292 ~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~----------~-~~l~FG~G~r~C~G~  359 (413)
T 2z36_A          292 ADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVF-KDPAVLDVERGA----------R-HHLAFGFGPHQCLGQ  359 (413)
T ss_dssp             TTTCEEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTCCC----------C-CCCTTCCSTTSCTTH
T ss_pred             cccceeeeeCCCEEECCEEECCCCEEEEChHhhcCChhhC-CCccccCCCCCC----------C-CCCCCCCCCccCccH
Confidence            99 6799999999999999999999999999999999999 999999999983          1 579999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhc-EEEeCCCC-ccCCCcceeeecCCCceEEEE
Q 039293          464 NFTIIEAKIALSMILRRY-KFTLSPNY-VHSPVPRITLCPQHGIQVMLR  510 (512)
Q Consensus       464 ~la~~~~~~~la~ll~~f-~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~  510 (512)
                      +||++|++++++.|+++| ++++.++. ..........+--..++|++.
T Consensus       360 ~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~~~~~~~g~~~lpv~~~  408 (413)
T 2z36_A          360 NLARMELQIVFDTLFRRIPSLRLAVPMEDVPFKGDSVIYGVHELPVTWH  408 (413)
T ss_dssp             HHHHHHHHHHHHHHHHHSTTCEESSCGGGSCBCTTSSSCCBSCCEEECC
T ss_pred             HHHHHHHHHHHHHHHHhCCCccccCCcccceecccccccCcceeeEEee
Confidence            999999999999999999 58987652 222223334455556777764


No 56 
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Probab=100.00  E-value=1.5e-61  Score=483.88  Aligned_cols=405  Identities=14%  Similarity=0.106  Sum_probs=295.7

Q ss_pred             CCCCCCCccCCCCHHHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCC-eEEEecCCeeE-------EEecCHH
Q 039293           42 GIKGPSYKFFHGNNKEIINMKNEMIMSSSPMELSHQIFPITEPHIYSWIKLYGT-NFLMWHGSQAE-------LVVAEPK  113 (512)
Q Consensus        42 ~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~-vf~~~~~~~~~-------vvv~dpe  113 (512)
                      .||||++||++|+++++.+..               +..+++.++.++++|||+ ||++++++.++       +++.+++
T Consensus        29 ~pPGp~g~P~iG~~~~~~~~~---------------~~~~~~~f~~~~~~kyG~~Vf~~~l~~~~~vv~~p~~v~~~~~~   93 (495)
T 3dsk_A           29 NIPGNYGLPIVGPIKDRWDYF---------------YDQGAEEFFKSRIRKYNSTVYRVNMPPGAFIAENPQVVALLDGK   93 (495)
T ss_dssp             CCCCCCCSTTHHHHHHHHHHH---------------TTSCHHHHHHHHHHHHTCSEEEEECSCCTTTCSCCEEEEECSTT
T ss_pred             CCCCCCCCCccchHHHHHHHH---------------HhcCcHHHHHHHHHHhCCceEeecCCCCCCccCCCCEEEEeCCc
Confidence            799999999999999987421               123567899999999999 99999998877       6677777


Q ss_pred             HHHHHHhcCC-----CCCCCchhhhHhhhc----CceeccCCchHHHHhhhhcCcCCHHHHhhhHHHHHHHHHHHHHHHH
Q 039293          114 LIKEIMNNNR-----SFPKREPREYLKLLG----NGLVTTRGEKWLKKRKLAVNAFHAENLKNMIPDMIASVDMMLERWR  184 (512)
Q Consensus       114 ~i~~i~~~~~-----~~~~~~~~~~~~~~g----~~l~~~~g~~w~~~Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l~  184 (512)
                      ..+.++..+.     .+........ .++|    .+++..+|+.|+++|+++.+.|+... ..+.+.+++.++++++.|.
T Consensus        94 ~~~~l~~~~~v~k~~~~~~~~~~~~-~l~g~~~~~~~~~~~g~~h~~~R~~~~~~f~~~~-~~~~~~i~~~~~~ll~~~~  171 (495)
T 3dsk_A           94 SFPVLFDVDKVEKKDLLTGTYMPST-ELTGGYRILSYLDPSEPKHEKLKNLLFFLLKSSR-NRIFPEFQATYSELFDSLE  171 (495)
T ss_dssp             TGGGGGCTTTEECSSCTTSSSCCCG-GGGTTCCCGGGCCTTSHHHHHHHHHHHHHHHHTT-TTHHHHHHHHHHHHHHHHH
T ss_pred             ceeeecccccccccccccccCCCCc-cccCCCcceeeeCCCchHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence            7766665432     1111111113 4555    23455689999999999999998754 8999999999999999997


Q ss_pred             hh--cCCcccHHHHHHHHhHhHhhhcccCccccccccHHHHHHHHHHHHHHhhhhcccccccccccCcchhhhHHHHHHH
Q 039293          185 DY--EGKEIDAYREIKVLTSEIISRTAFGSCYLEGENIFNMLTKMAYIVAKKKYKLEIPGIGKLLKTNDDIESDKLEQDI  262 (512)
Q Consensus       185 ~~--~~~~vd~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~  262 (512)
                      +.  .++++|+.+++..++++++++++||.+..+.+ ..+....+.......   ...|.+...+|              
T Consensus       172 ~~~~~~~~vdl~~~~~~~~~~~i~~~~~G~~~~~~~-~~~~~~~~~~~~~~~---~~~p~~~~~~p--------------  233 (495)
T 3dsk_A          172 KELSLKGKADFGGSSDGTAFNFLARAFYGTNPADTK-LKADAPGLITKWVLF---NLHPLLSIGLP--------------  233 (495)
T ss_dssp             HHHHHHSSEESHHHHHHHHHHHHHHHHHSCCGGGST-TTTCHHHHHHHHHHH---HHGGGCCCSSC--------------
T ss_pred             HHhccCCCccHHHHHHHHHHHHHHHHHcCCCcchhh-hhhhHHHHHHHHHHH---hhhhHhHhccH--------------
Confidence            63  23689999999999999999999998876442 111111111111111   11222211111              


Q ss_pred             HHHHHHHHHHHhhhh------hcccccccCCcHHHHHHHhccccccccCCCHHHHHHHHHHHH-HhchhhhHHHHHHHHH
Q 039293          263 RDSIIKVVKKRESNV------LTGEAESYGNDLLGILMRAYHSADETQKISLDDLIDECKTFY-VAGTDTTASLLSWTIF  335 (512)
Q Consensus       263 ~~~l~~~i~~~~~~~------~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~-~ag~~tt~~~l~~~l~  335 (512)
                       +++.+.+.+++...      ......+...+.++.+++...    +..++++|+..+++.++ +||++||+.+++|+++
T Consensus       234 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~----~~~l~~~ei~~~~~~~l~~ag~~tt~~~l~~~l~  308 (495)
T 3dsk_A          234 -RVIEEPLIHTFSLPPALVKSDYQRLYEFFLESAGEILVEAD----KLGISREEATHNLLFATCFNTWGGMKILFPNMVK  308 (495)
T ss_dssp             -HHHHHHHHSSSCCCGGGGHHHHHHHHHHHHHHCHHHHHHHH----HTTCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred             -HHHHHHHHHhhcccchhhhhhHHHHHHHHHHHHHHHHHHHH----hCCCCHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence             11122221111000      000000000122234443332    34789999998666655 9999999999999999


Q ss_pred             HHhh-ChHHHHHHHHHHHHHhC--CCCCChhhhccchhHHHHHHhhhccCCCCccccceecccccc----CCeeeCCCCE
Q 039293          336 LLAI-HSDWQDKARKEVLELLG--QQNPSADNISRLKIVGMIINETLRLYPPFVVFVREVKKEVKL----GDLIVPANVD  408 (512)
Q Consensus       336 ~L~~-~p~~~~~l~~Ei~~~~~--~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~~----~g~~IpkG~~  408 (512)
                      +|+. ||++|+++++|++++++  ++.++++++.+||||+|||+|+||++|+++...|.+.+|+++    +||.||||+.
T Consensus       309 ~L~~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~a~~d~~l~~~~~g~~IpkG~~  388 (495)
T 3dsk_A          309 RIGRAGHQVHNRLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIESHDAAFKVKAGEM  388 (495)
T ss_dssp             HHHHHCHHHHHHHHHHHHHHHHHTTTCCCHHHHHTCHHHHHHHHHHHHHSCSSCEEEEEESSCEEEECSSCEEEECTTCE
T ss_pred             HHHhcCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhcCCCccccceeecCCeEeccCCCceEECCCCE
Confidence            9995 99999999999999987  367999999999999999999999999999998889999999    5999999999


Q ss_pred             EEEccchhccCCCCcCCCCCCCCCCCCCCCCCcccc-----CCCccccccCCCcccccchHHHHHHHHHHHHHHHhhcEE
Q 039293          409 VTIPVIAVHHDPQIWGEDFHLYKPERFAQGVPKATS-----NNMAAFLPFGLGPRTCVGFNFTIIEAKIALSMILRRYKF  483 (512)
Q Consensus       409 v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~-----~~~~~~~~Fg~G~r~C~G~~la~~~~~~~la~ll~~f~~  483 (512)
                      |+++.+++||||++| +||++|+||||++.++....     .....++|||+|+|.|||++||.+|++++++.|+++|++
T Consensus       389 v~~~~~~~~~dp~~~-~dp~~F~P~Rfl~~~~~~~~~~~~fg~G~~~~~fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~  467 (495)
T 3dsk_A          389 LYGYQPLATRDPKIF-DRADEFVPERFVGEEGEKLLRHVLWSNGPETETPTVGNKQCAGKDFVVLVARLFVIEIFRRYDS  467 (495)
T ss_dssp             EEEEHHHHHTCTTTS-TTTTSCCTTTTCHHHHHHGGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHHHHHHHHHHEEE
T ss_pred             EEeccHHhhCCcccC-CCccccCCcccCCCCccchhhcccccCCcCcCCCCCCCCcCchHHHHHHHHHHHHHHHHHHCce
Confidence            999999999999999 99999999999975221110     000134555556699999999999999999999999998


Q ss_pred             EeCC
Q 039293          484 TLSP  487 (512)
Q Consensus       484 ~~~~  487 (512)
                      ...+
T Consensus       468 ~~~~  471 (495)
T 3dsk_A          468 FDIE  471 (495)
T ss_dssp             EEEE
T ss_pred             EeCC
Confidence            7654


No 57 
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Probab=100.00  E-value=4.6e-60  Score=462.63  Aligned_cols=369  Identities=14%  Similarity=0.144  Sum_probs=295.8

Q ss_pred             CchHHHHHHHHHhCCeEEEe--------cCCeeEEEecCHHHHHHHHhcCCCCCCCchhh-----------hHhhhcCce
Q 039293           81 ITEPHIYSWIKLYGTNFLMW--------HGSQAELVVAEPKLIKEIMNNNRSFPKREPRE-----------YLKLLGNGL  141 (512)
Q Consensus        81 ~~~~~~~~~~~kyG~vf~~~--------~~~~~~vvv~dpe~i~~i~~~~~~~~~~~~~~-----------~~~~~g~~l  141 (512)
                      +++.++.++ ++|||||++.        +|+.++++|++++.+++++.+...|+++....           .....+.++
T Consensus        38 ~p~~~~~~l-r~~gPv~~~~~~~g~~~~lG~~~~~vv~~~~~v~~vl~~~~~fs~~~~~~~~~~~~~~~~~~~~~~~~~l  116 (433)
T 3ivy_A           38 LPVAEFAEL-RSAAPIWWNGQDPGKGGGFHDGGFWAITKLNDVKEISRHSDVFSSYENGVIPRFKNDIAREDIEVQRFVM  116 (433)
T ss_dssp             CCHHHHHHH-HHHCSEEEEECCTTCSTTCCSSEEEEECSHHHHHHHHHCTTTEESTTTCSCCCCCTTCCHHHHHGGGGSG
T ss_pred             CccHHHHHH-HhcCCEEecccccccccccCCCCEEEEecHHHHHHHHcChhhccCCcccccccccccccccccccccCCc
Confidence            357788888 8899999998        55578999999999999998765565443211           112346788


Q ss_pred             eccCCchHHHHhhhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhcCCcccHHHHH-HHHhHhHhhhcccCccccccccH
Q 039293          142 VTTRGEKWLKKRKLAVNAFHAENLKNMIPDMIASVDMMLERWRDYEGKEIDAYREI-KVLTSEIISRTAFGSCYLEGENI  220 (512)
Q Consensus       142 ~~~~g~~w~~~Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~~~~vd~~~~~-~~~~~~~i~~~~fG~~~~~~~~~  220 (512)
                      +..+|+.|+++|+++++.|+...++.+.+.+.+.++++++.|.+.  +++|+..++ ..++.++++.+ ||.+..+.   
T Consensus       117 ~~~dg~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~--~~~d~~~~~~~~~~~~vi~~l-~G~~~~~~---  190 (433)
T 3ivy_A          117 LNMDAPHHTRLRKIISRGFTPRAVGRLHDELQERAQKIAAEAAAA--GSGDFVEQVSCELPLQAIAGL-LGVPQEDR---  190 (433)
T ss_dssp             GGCCTTHHHHHHHHHGGGSCHHHHHTTHHHHHHHHHHHHHHHHHH--CEEEHHHHTTSHHHHHHHHHH-HTCCHHHH---
T ss_pred             cccChHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhhC--CCeeHHHHHHHHHHHHHHHHH-cCCCHHHH---
Confidence            899999999999999999999999999999999999999999753  689999998 99999999996 89653221   


Q ss_pred             HHHHHHHHHHHHHhhhhcccccccccccCcchhhhHHHHHHHHHHHHHHHHHHhhhhhcccccccCCcHHHHHHHhcccc
Q 039293          221 FNMLTKMAYIVAKKKYKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKVVKKRESNVLTGEAESYGNDLLGILMRAYHSA  300 (512)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~  300 (512)
                       +.+   ...... ......|.+       ...+..++.+.+.+++.+.+++++++        ...|+++.|++...+ 
T Consensus       191 -~~~---~~~~~~-~~~~~~p~~-------~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~dll~~ll~~~~~-  249 (433)
T 3ivy_A          191 -GKL---FHWSNE-MTGNEDPEY-------AHIDPKASSAELIGYAMKMAEEKAKN--------PADDIVTQLIQADID-  249 (433)
T ss_dssp             -HHH---HHHHTT-CSCCCCGGG-------TTCCHHHHHHHHHHHHHHHHHHC---------------CHHHHHSCC---
T ss_pred             -HHH---HHHHHH-HhccCCchh-------hhHHHHHHHHHHHHHHHHHHHHHhcC--------CCCcHHHHHHhhhcC-
Confidence             111   111111 111122322       11246677888899999999887754        356999999976442 


Q ss_pred             ccccCCCHHHHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhCCCCCChhhhccchhHHHHHHhhhc
Q 039293          301 DETQKISLDDLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARKEVLELLGQQNPSADNISRLKIVGMIINETLR  380 (512)
Q Consensus       301 ~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~l~~l~a~i~E~lR  380 (512)
                        +..++++++..++..+++||+|||+++++|++++|++||++|+++++|++                   +|||+|+||
T Consensus       250 --~~~ls~~ei~~~~~~ll~AG~dTTa~~l~~~l~~L~~~P~~~~~l~~E~~-------------------~a~i~E~LR  308 (433)
T 3ivy_A          250 --GEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQWELYKKVRP-------------------ETAADEIVR  308 (433)
T ss_dssp             --CCCCCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHCHHHHHHHHHHCC-------------------TTHHHHHHH
T ss_pred             --CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCHHHHHHHHhCcc-------------------cchhHHHhh
Confidence              45799999999999999999999999999999999999999999999963                   799999999


Q ss_pred             cCCCCccccceeccccccCCeeeCCCCEEEEccchhccCCCCcCCCCCCCCCCCCCCCCCccccCCCccccccC-CCccc
Q 039293          381 LYPPFVVFVREVKKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGEDFHLYKPERFAQGVPKATSNNMAAFLPFG-LGPRT  459 (512)
Q Consensus       381 l~p~~~~~~R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg-~G~r~  459 (512)
                      ++|+++.++|.+.+|++++||.||||+.|+++.+++||||++| +||++|+||||..           .++||| .|+|.
T Consensus       309 l~p~~~~~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~f-~dp~~F~p~R~~~-----------~~l~FGg~G~r~  376 (433)
T 3ivy_A          309 WATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSANFDEEVF-QDPFTFNILRNPN-----------PHVGFGGTGAHY  376 (433)
T ss_dssp             HHCSBCEEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTS-SSTTSCCTTCCSC-----------CCCTTCSSSTTC
T ss_pred             hCcchhceeeEECCCEEECCEEECCCCEEEEChhhhcCCchhC-CCcCccCCCCCCC-----------CCCCCCCCCCcc
Confidence            9999999999999999999999999999999999999999999 9999999999932           689999 99999


Q ss_pred             ccchHHHHHHHHHHHHHHHhhcE-EEeCCCCccCCCcceeeecCCCceEEEEeC
Q 039293          460 CVGFNFTIIEAKIALSMILRRYK-FTLSPNYVHSPVPRITLCPQHGIQVMLRAL  512 (512)
Q Consensus       460 C~G~~la~~~~~~~la~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  512 (512)
                      |+|++||++|++++++.|+++|+ +++.++.....  ....+...+++|++++|
T Consensus       377 C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~--~~~~~g~~~lpv~~~~R  428 (433)
T 3ivy_A          377 CIGANLARMTINLIFNAVADHMPDLKPISAPERLR--SGWLNGIKHWQVDYTGR  428 (433)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHCTTCEESSCCEECC--CSSBCCEEECEEESCC-
T ss_pred             CCCHHHHHHHHHHHHHHHHHhCCccEECCCCceec--cCcccCcceeEEEEecc
Confidence            99999999999999999999999 99975432222  22233344788888876


No 58 
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A*
Probab=100.00  E-value=1.2e-59  Score=455.54  Aligned_cols=370  Identities=15%  Similarity=0.201  Sum_probs=301.3

Q ss_pred             ccccCchHHHHHHHHHhCCeEEEecCCeeEEEecCHHHHHHHHhcCCCCCCCchhh---hHhhhcCceeccCCchHHHHh
Q 039293           77 QIFPITEPHIYSWIKLYGTNFLMWHGSQAELVVAEPKLIKEIMNNNRSFPKREPRE---YLKLLGNGLVTTRGEKWLKKR  153 (512)
Q Consensus        77 ~~~~~~~~~~~~~~~kyG~vf~~~~~~~~~vvv~dpe~i~~i~~~~~~~~~~~~~~---~~~~~g~~l~~~~g~~w~~~R  153 (512)
                      .+..+++.++.+|+++ |+||++..++. .++|+||+.+++++.+.+.|.++....   .....+.+++..+|+.|+++|
T Consensus        21 ~~~~~p~~~~~~l~~~-Gpv~~~~~~~~-~~vv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~g~~h~~~R   98 (396)
T 3oft_A           21 GVEQDYFAAWKTLLDG-PGLVWSTANGG-HWIAARGDVVRELWGDAERLSSQCLAVTPGLGKVMQFIPLQQDGAEHKAFR   98 (396)
T ss_dssp             TTTTCHHHHHHGGGGS-CSEEEECSTTS-EEEECSHHHHHHHHHCTTTEESTTCCSSTTHHHHHCCTTTTCCHHHHHHHH
T ss_pred             hhhcChHHHHHHHHhc-CCeeeecCCCC-EEEEcCHHHHHHHHcCcccccCCcccCCCccccccccCccccCCcHHHHHH
Confidence            4455778899999998 99999998754 889999999999998766665544221   222335677888999999999


Q ss_pred             hhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhcCCcccHHHHH-HHHhHhHhhhcccCccccccccHHHHHHHHHHHHH
Q 039293          154 KLAVNAFHAENLKNMIPDMIASVDMMLERWRDYEGKEIDAYREI-KVLTSEIISRTAFGSCYLEGENIFNMLTKMAYIVA  232 (512)
Q Consensus       154 r~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~~~~vd~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~  232 (512)
                      +++.+.|+...++.+.+.+.+.++++++.|.+.  +.+|+...+ ..++.++++. +||.+.++.+.+..    +...+.
T Consensus        99 ~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~--~~~d~~~~~~~~~~~~v~~~-~~G~~~~~~~~~~~----~~~~~~  171 (396)
T 3oft_A           99 TPVMKGLASRFVVALEPKVQAVARKLMESLRPR--GSCDFVSDFAEILPLNIFLT-LIDVPLEDRPRLRQ----LGVQLT  171 (396)
T ss_dssp             HHHHHHTCHHHHHHHHHHHHHHHHHHHHHHGGG--SEEEHHHHTTTTHHHHHHHH-HTTCCGGGHHHHHH----HHHHHH
T ss_pred             HHhhhhhCHHHHHHHHHHHHHHHHHHHHHhhhc--CCccHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHH----HHHHHh
Confidence            999999999999999999999999999999754  578988776 4566666665 68976543222221    111110


Q ss_pred             HhhhhcccccccccccCcchhhhHHHHHHHHHHHHHHHHHHhhhhhcccccccCCcHHHHHHHhccccccccCCCHHHHH
Q 039293          233 KKKYKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKVVKKRESNVLTGEAESYGNDLLGILMRAYHSADETQKISLDDLI  312 (512)
Q Consensus       233 ~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~  312 (512)
                              .       ....+...++.+.+.+++.+.+++++++        ...|+++.|++...+   +..++++++.
T Consensus       172 --------~-------~~~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~d~l~~ll~~~~~---~~~l~~~el~  225 (396)
T 3oft_A          172 --------R-------PDGSMTVEQLKQAADDYLWPFIEKRMAQ--------PGDDLFSRILSEPVG---GRPWTVDEAR  225 (396)
T ss_dssp             --------S-------CCSSCCHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHHTSCBT---TBCCCHHHHH
T ss_pred             --------C-------CCCHHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHHhhcc---CCCCCHHHHH
Confidence                    0       0113456778888999999999988765        457999999987543   4579999999


Q ss_pred             HHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhCCCCCChhhhccchhHHHHHHhhhccCCCCcccccee
Q 039293          313 DECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARKEVLELLGQQNPSADNISRLKIVGMIINETLRLYPPFVVFVREV  392 (512)
Q Consensus       313 ~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~  392 (512)
                      +++..+++||+|||+++++|++++|++||++|+|+++|++                 |++|||+|+||++|++ .++|.+
T Consensus       226 ~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~-----------------~l~a~i~E~lRl~p~~-~~~R~~  287 (396)
T 3oft_A          226 RMCRNLLFGGLDTVAAMIGMVALHLARHPEDQRLLRERPD-----------------LIPAAADELMRRYPTV-AVSRNA  287 (396)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG-----------------GHHHHHHHHHHHCCCB-EEEEEE
T ss_pred             HHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH-----------------hHHHHHHHHHHhcCcc-cCceec
Confidence            9999999999999999999999999999999999999963                 7999999999999999 789999


Q ss_pred             ccccccCCeeeCCCCEEEEccchhccCCCCcCCCCCCCCCCCCCCCCCccccCCCccccccCCCcccccchHHHHHHHHH
Q 039293          393 KKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGEDFHLYKPERFAQGVPKATSNNMAAFLPFGLGPRTCVGFNFTIIEAKI  472 (512)
Q Consensus       393 ~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~  472 (512)
                      .+|++++||.||||+.|+++.+++||||++| +||++|+||||++.        . .++|||+|+|.|+|++||++|+++
T Consensus       288 ~~d~~~~g~~Ip~G~~V~~~~~~~~rdp~~~-~dp~~F~PeR~~~~--------~-~~~~FG~G~r~C~G~~lA~~e~~~  357 (396)
T 3oft_A          288 VADVDADGVTIRKGDLVYLPSVLHNLDPASF-EAPEEVRFDRGLAP--------I-RHTTMGVGAHRCVGAGLARMEVIV  357 (396)
T ss_dssp             SSCEEETTEEECTTCEEEEETHHHHTCTTTS-SSTTSCCSCCCCCG--------G-GSSTTCCGGGCCTTHHHHHHHHHH
T ss_pred             CCCEEECCEEECCCCEEEeChHHhCCCcccC-CCcCccCCCCCCCC--------C-CcccCCCCCccCcCHHHHHHHHHH
Confidence            9999999999999999999999999999999 99999999999742        2 789999999999999999999999


Q ss_pred             HHHHHHhhc-EEEeCCCCccCCCcceeeecCCCceEEEE
Q 039293          473 ALSMILRRY-KFTLSPNYVHSPVPRITLCPQHGIQVMLR  510 (512)
Q Consensus       473 ~la~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  510 (512)
                      +++.|+++| ++++.++.........+ +....++|++.
T Consensus       358 ~l~~ll~~~~~~~l~~~~~~~~~~~~~-~~~~~lpv~~~  395 (396)
T 3oft_A          358 FLREWLGGMPEFALAPDKAVTMKGGNV-GACTALPLVWR  395 (396)
T ss_dssp             HHHHHHHHSCCEEECSSSCCEEECSSB-CEEEECEEEEC
T ss_pred             HHHHHHHhCCCceECCCCCceeccccc-cCcccceEEeC
Confidence            999999999 99998764433222222 33335777763


No 59 
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A*
Probab=100.00  E-value=6.4e-61  Score=476.90  Aligned_cols=405  Identities=13%  Similarity=0.102  Sum_probs=292.4

Q ss_pred             CCCCCCCccCCCCHHHHHHHHHhhhhcCCCccccccccc-CchHHHHHHHHHhCC-eEEEecCCe-------eEEEecCH
Q 039293           42 GIKGPSYKFFHGNNKEIINMKNEMIMSSSPMELSHQIFP-ITEPHIYSWIKLYGT-NFLMWHGSQ-------AELVVAEP  112 (512)
Q Consensus        42 ~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~kyG~-vf~~~~~~~-------~~vvv~dp  112 (512)
                      .+|||+++|++|+++.+.+.               .+.. +++.++.++++|||+ ||++++++.       ..|++.+.
T Consensus        10 ~iPGp~g~P~iG~~~~~~~~---------------~~~~g~~~~~~~~~~~kyG~~vf~~~~~~~~~v~~~~~~v~~~~~   74 (473)
T 3dan_A           10 EIPGSYGIPFFQPIKDRLEY---------------FYGTGGRDEYFRSRMQKYQSTVFRANMPPGPFVSSNPKVIVLLDA   74 (473)
T ss_dssp             CCCCCCCSTTHHHHHHHHHH---------------HHSTTHHHHHHHHHHHHHTCSEEEEECTTCTTTCSCCEEEEECST
T ss_pred             CCCCCCCCcchhhHHHHHHH---------------HHhhcCchHHHHhHHHHhCCeEEEecCCCCCccccCCceEEeecc
Confidence            79999999999999998641               1122 456789999999999 999998633       34555666


Q ss_pred             HHHHHHHhcC-----CCCCCCchhhhHhhhc----CceeccCCchHHHHhhhhcCcCCHHHHhhhHHHHHHHHHHHHHHH
Q 039293          113 KLIKEIMNNN-----RSFPKREPREYLKLLG----NGLVTTRGEKWLKKRKLAVNAFHAENLKNMIPDMIASVDMMLERW  183 (512)
Q Consensus       113 e~i~~i~~~~-----~~~~~~~~~~~~~~~g----~~l~~~~g~~w~~~Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l  183 (512)
                      +..+.++...     ..+........ .+.|    .+++..+|+.|+++|+++.+.|+.+ ++.+.+.+++.++++++.|
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~h~~~R~~~~~~f~~~-~~~~~~~i~~~~~~ll~~~  152 (473)
T 3dan_A           75 KSFPILFDVSKVEKKDLFTGTYMPST-KLTGGYRVLSYLDPSEPRHAQLKNLLFFMLKNS-SNRVIPQFETTYTELFEGL  152 (473)
T ss_dssp             TTGGGGGCTTTEECSSCTTSSSCCCG-GGGTTSCCGGGCCTTSHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred             cccceecCCcceeccccccccccCCc-cccCCCcceeeeCCCcHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence            6555555421     12211111112 3333    3456678999999999999999984 8999999999999999999


Q ss_pred             Hhhc--CCcccHHHHHHHHhHhHhhhcccCccccccccHHHHHHHHHHHHHHhhhhcccccccccccCcchhhhHHHHHH
Q 039293          184 RDYE--GKEIDAYREIKVLTSEIISRTAFGSCYLEGENIFNMLTKMAYIVAKKKYKLEIPGIGKLLKTNDDIESDKLEQD  261 (512)
Q Consensus       184 ~~~~--~~~vd~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~  261 (512)
                      .+..  ++++|+.+++..++.++++.++||.+.+. ....+....+......   ....|.+...++             
T Consensus       153 ~~~~~~~~~vdl~~~~~~~~~~~i~~~~~G~~~~~-~~~~~~~~~~~~~~~~---~~~~p~~~~~lp-------------  215 (473)
T 3dan_A          153 EAELAKNGKAAFNDVGEQAAFRFLGRAYFNSNPEE-TKLGTSAPTLISSWVL---FNLAPTLDLGLP-------------  215 (473)
T ss_dssp             HHHHHHHSCEECHHHHHHHHHHHHHHHHHSCCGGG-STTTTCHHHHHHHHHH---HHHGGGCCCSCC-------------
T ss_pred             HHHhccCCcccHHHHHHHHHHHHHHHHHcCCCCCc-hhhhhhHHHHHHHHHH---Hhccchhhhcch-------------
Confidence            7532  35899999999999999999999998775 2222222222221111   111232211122             


Q ss_pred             HHHHHHHHHHHHhh------hhhcccccccCCcHHHHHHHhccccccccCCCHHHHHHHHHHHH-HhchhhhHHHHHHHH
Q 039293          262 IRDSIIKVVKKRES------NVLTGEAESYGNDLLGILMRAYHSADETQKISLDDLIDECKTFY-VAGTDTTASLLSWTI  334 (512)
Q Consensus       262 ~~~~l~~~i~~~~~------~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~-~ag~~tt~~~l~~~l  334 (512)
                        .++...+.+++.      ....+.....-.|+++.+++...    +..++++++..+++.+. ++|++||+++++|++
T Consensus       216 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~----~~~l~~~ei~~~~l~~~g~~~~~tta~~l~~~l  289 (473)
T 3dan_A          216 --WFLQEPLLHTFRLPAFLIKSTYNKLYDYFQSVATPVMEQAE----KLGVPKDEAVHNILFAVCFNTFGGVKILFPNTL  289 (473)
T ss_dssp             --HHHHHHHHSSSCCCGGGTHHHHHHHHHHHHHHCHHHHHHHH----HHTCCHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             --HHHHHHHhhhccchHhhhhhchhhhHHHHHHHHHHHHHhHh----hcCCCHHHHHHHHHHHHHHhccccHHHHHHHHH
Confidence              011111111110      00000000011244444554432    24789999998886666 888999999999999


Q ss_pred             HHHhh-ChHHHHHHHHHHHHHhCC---CCCChhhhccchhHHHHHHhhhccCCCCccccceecccccc----CCeeeCCC
Q 039293          335 FLLAI-HSDWQDKARKEVLELLGQ---QNPSADNISRLKIVGMIINETLRLYPPFVVFVREVKKEVKL----GDLIVPAN  406 (512)
Q Consensus       335 ~~L~~-~p~~~~~l~~Ei~~~~~~---~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~~----~g~~IpkG  406 (512)
                      ++|++ ||++|+++++|+++++++   ..++++++.+||||+|||+|+||++|+++...|.+.+|+++    +||.||||
T Consensus       290 ~~L~~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~~~~~g~~Ip~G  369 (473)
T 3dan_A          290 KWIGLAGENLHTQLAEEIRGAIKSYGDGNVTLEAIEQMPLTKSVVYESLRIEPPVPPQYGKAKSNFTIESHDATFEVKKG  369 (473)
T ss_dssp             HHHHHHCHHHHHHHHHHHHHHHHHHSTTSCCHHHHHTCHHHHHHHHHHHHHSCSSCEEEEEESSCEEEECSSCEEEECTT
T ss_pred             HHHHhcCHHHHHHHHHHHHHHhhcccCCCCCHHHHhcCchHHHHHHHHHhcCCCcccccccccCCcEeecCCCceEeCCC
Confidence            99999 899999999999999875   67999999999999999999999999999987889999999    99999999


Q ss_pred             CEEEEccchhccCCCCcCCCCCCCCCCCCCCCCCcccc----CCCccccccCCCcccccchHHHHHHHHHHHHHHHhhcE
Q 039293          407 VDVTIPVIAVHHDPQIWGEDFHLYKPERFAQGVPKATS----NNMAAFLPFGLGPRTCVGFNFTIIEAKIALSMILRRYK  482 (512)
Q Consensus       407 ~~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~----~~~~~~~~Fg~G~r~C~G~~la~~~~~~~la~ll~~f~  482 (512)
                      +.|+++.+++||||++| +||++|+|+||++.......    .....+++||+|+|.|||++||++|++++++.|+++|+
T Consensus       370 ~~v~~~~~~~~~dp~~~-~dp~~F~p~R~~~~~~~~~~~~~fg~G~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f~  448 (473)
T 3dan_A          370 EMLFGYQPFATKDPKVF-DRPEEYVPDRFVGDGEALLKYVWWSNGPETESPTVENKQCAGKDFVVLITRLFVIELFRRYD  448 (473)
T ss_dssp             CEEEEEHHHHTTCTTTS-SSTTSCCTTTTSGGGGGGGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHHHHHHHHHHEE
T ss_pred             CEEEechHHhhCCchhc-CCcccCCccccCCCcccccccceecCCcCcCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCC
Confidence            99999999999999999 99999999999975111100    00012444555559999999999999999999999999


Q ss_pred             EEeCC
Q 039293          483 FTLSP  487 (512)
Q Consensus       483 ~~~~~  487 (512)
                      +...+
T Consensus       449 ~~~~~  453 (473)
T 3dan_A          449 SFEIE  453 (473)
T ss_dssp             EEEEE
T ss_pred             eEEcc
Confidence            76644


No 60 
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A*
Probab=100.00  E-value=3.6e-59  Score=450.98  Aligned_cols=362  Identities=15%  Similarity=0.209  Sum_probs=296.2

Q ss_pred             cCchHHHHHHHHHhCCeEEEec-CCeeEEEecCHHHHHHHHhcCCCCCCCchh-h-hHhh-hcCc--eeccCC------c
Q 039293           80 PITEPHIYSWIKLYGTNFLMWH-GSQAELVVAEPKLIKEIMNNNRSFPKREPR-E-YLKL-LGNG--LVTTRG------E  147 (512)
Q Consensus        80 ~~~~~~~~~~~~kyG~vf~~~~-~~~~~vvv~dpe~i~~i~~~~~~~~~~~~~-~-~~~~-~g~~--l~~~~g------~  147 (512)
                      .+++.++.++ ++||+||++++ ++.+.++|+||+.+++++.++. |.++... . .... .+.+  +++.+|      +
T Consensus        26 ~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~~-f~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~  103 (404)
T 2xbk_A           26 LKLSPLLRAL-QDRGPIHRVRTPAGDEAWLVTRHAELKQLLHDER-IGRTHPDPPSAAQYVRSPFLDLLISDADAESGRR  103 (404)
T ss_dssp             TBCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHTTCTT-EESBCSSGGGSCCSSCCHHHHTTCBCSCHHHHHH
T ss_pred             cCccHHHHHH-HhhCCEeeeccCCCceEEEEcCHHHHHHHHcCCC-CCCCccccccCCcccccccccceeeCCCCCCCCc
Confidence            4567788999 89999999997 8889999999999999998753 5444322 1 2221 3445  777889      9


Q ss_pred             hHHHHhhhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhcCCcccHHHHH-HHHhHhHhhhcccCccccccccHHHHHHH
Q 039293          148 KWLKKRKLAVNAFHAENLKNMIPDMIASVDMMLERWRDYEGKEIDAYREI-KVLTSEIISRTAFGSCYLEGENIFNMLTK  226 (512)
Q Consensus       148 ~w~~~Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~~~~vd~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~  226 (512)
                      .|+++|+++.+.|+..+++.+.+.+.+.++++++.|... ++++|+..++ ..++.++++. +||.+.++.+.+.    .
T Consensus       104 ~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~-g~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~~~~~----~  177 (404)
T 2xbk_A          104 QHAETRRLLTPLFSARRVLEMQPKVEEAADTLLDAFIAQ-GPPGDLHGELTVPFALTVLCE-VIGVPPQRRAELT----T  177 (404)
T ss_dssp             HHHHHHHHHGGGGCHHHHHHHHHHHHHHHHHHHHHHHHT-CSSEEHHHHTHHHHHHHHHHH-HHTCCGGGHHHHH----H
T ss_pred             hHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeeHHHHHHHHHHHHHHHH-HhCCCHHHHHHHH----H
Confidence            999999999999999999999999999999999999753 3489999776 5699999997 7998765322221    1


Q ss_pred             HHHHHHHhhhhcccccccccccCcchhhhHHHHHHHHHHHHHHHHHHhhhhhcccccccCCcHHHHHHHhccccccccCC
Q 039293          227 MAYIVAKKKYKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKVVKKRESNVLTGEAESYGNDLLGILMRAYHSADETQKI  306 (512)
Q Consensus       227 ~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l  306 (512)
                      +...+    .....|      +     +..++...+.+++.+.++++++.        ...|+++.+ +    +  + .+
T Consensus       178 ~~~~~----~~~~~~------p-----~~~~~~~~~~~~~~~~i~~r~~~--------~~~dll~~l-~----~--~-~l  226 (404)
T 2xbk_A          178 LLAGI----AKLDDR------E-----GAVRAQDDLFGYVAGLVEHKRAE--------PGPDIISRL-N----D--G-EL  226 (404)
T ss_dssp             HHHHH----TBSSCH------H-----HHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHH-H----S--S-SC
T ss_pred             HHHHH----HhccCc------H-----HHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHh-h----c--C-CC
Confidence            11111    100000      1     45667788888999999887754        246899988 2    2  3 78


Q ss_pred             CHHHHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhCCCCCChhhhccchhHHHHHHhhhccCCCCc
Q 039293          307 SLDDLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARKEVLELLGQQNPSADNISRLKIVGMIINETLRLYPPFV  386 (512)
Q Consensus       307 ~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~  386 (512)
                      +++++..++..+++||+|||+++++|++++|++||++|+|+++|++                 |++|||+|+||++|+++
T Consensus       227 s~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~-----------------~l~a~i~E~lRl~p~~~  289 (404)
T 2xbk_A          227 TEDRVAHLAMGLLFAGLDSVASIMDNGVVLLAAHPDQRAAALADPD-----------------VMARAVEEVLRTARAGG  289 (404)
T ss_dssp             CHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHCHH-----------------HHHHHHHHHHHHSCSSC
T ss_pred             CHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHhCHH-----------------HHHHHHHHHHHhCCCcc
Confidence            9999999999999999999999999999999999999999999963                 69999999999999999


Q ss_pred             --cccceeccccccCCeeeCCCCEEEEccchhccCCCCcCCCCCCCCCCCCCCCCCccccCCCccccccCCCcccccchH
Q 039293          387 --VFVREVKKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGEDFHLYKPERFAQGVPKATSNNMAAFLPFGLGPRTCVGFN  464 (512)
Q Consensus       387 --~~~R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~  464 (512)
                        .++|.+.+|++++||.||||+.|+++.+++||||++| +||++|+||||.          . .++|||.|+|.|+|++
T Consensus       290 ~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~----------~-~~lpFG~G~r~C~G~~  357 (404)
T 2xbk_A          290 SVLPPRYASEDMEFGGVTIRAGDLVLFDLGLPNFDERAF-TGPEEFDAARTP----------N-PHLTFGHGIWHCIGAP  357 (404)
T ss_dssp             CBCSCEEESSCEEETTEEECTTCEEECBTHHHHTCTTTS-SSTTSCCTTCSS----------C-CCCTTEETTEECTTHH
T ss_pred             ccccceeECCCeeECCEEECCCCEEEeChHHhcCChhhC-CCccccCCCCCC----------C-CCCCCCCCCcCCCcHH
Confidence              6799999999999999999999999999999999999 999999999983          1 6899999999999999


Q ss_pred             HHHHHHHHHHHHHHhhc-EEEeCCCC-ccCCCcceeeecCCCceEEE
Q 039293          465 FTIIEAKIALSMILRRY-KFTLSPNY-VHSPVPRITLCPQHGIQVML  509 (512)
Q Consensus       465 la~~~~~~~la~ll~~f-~~~~~~~~-~~~~~~~~~~~~~~~~~v~~  509 (512)
                      ||++|++++++.|+++| ++++.++. ...+..+.+.+...+++|++
T Consensus       358 lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~  404 (404)
T 2xbk_A          358 LARLELRTMFTKLFTRLPELRPELPVEQLRLKEGQLSGGFAELRVVW  404 (404)
T ss_dssp             HHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCSSBTTCCBSCCEEEC
T ss_pred             HHHHHHHHHHHHHHHhCCcceecCCCCcceeccCcccCCcceeeeeC
Confidence            99999999999999999 69997542 22333445557777888864


No 61 
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Probab=100.00  E-value=7.7e-60  Score=460.30  Aligned_cols=379  Identities=20%  Similarity=0.247  Sum_probs=304.2

Q ss_pred             ccccCchHHHHHHHHHhCCeEEEecCCeeEEEecCHHHHHHHHhcCCCCCCCchhh-hH----------hhhcCceeccC
Q 039293           77 QIFPITEPHIYSWIKLYGTNFLMWHGSQAELVVAEPKLIKEIMNNNRSFPKREPRE-YL----------KLLGNGLVTTR  145 (512)
Q Consensus        77 ~~~~~~~~~~~~~~~kyG~vf~~~~~~~~~vvv~dpe~i~~i~~~~~~~~~~~~~~-~~----------~~~g~~l~~~~  145 (512)
                      .+..+++.++.++ ++|||||++++|   .++|+||+.+++++.+...+...+... ..          ...+.++++.+
T Consensus        26 ~~~~~p~~~~~~l-r~~gpv~~~~~g---~~vv~~~~~v~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d  101 (418)
T 3r9b_A           26 ATRADPYPIYDRI-RRGGPLALPEAN---LAVFSSFSDCDDVLRHPSSCSDRTKSTIFQRQLAAETQPRPQGPASFLFLD  101 (418)
T ss_dssp             GGTTCCHHHHHHH-HHHCCEEEGGGT---EEEECSHHHHHHHHHCTTEECCGGGCHHHHHHHC---------CCCGGGCC
T ss_pred             hhccCchHHHHHH-HhcCCEEECCCC---eEEEecHHHHHHHHcCcccccCcccccccccccccccccccccccchhhcC
Confidence            3445677888888 688999988776   899999999999998755333322211 11          12356788899


Q ss_pred             CchHHHHhhhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhcCCcccHHHHH-HHHhHhHhhhcccCccccccccHHHHH
Q 039293          146 GEKWLKKRKLAVNAFHAENLKNMIPDMIASVDMMLERWRDYEGKEIDAYREI-KVLTSEIISRTAFGSCYLEGENIFNML  224 (512)
Q Consensus       146 g~~w~~~Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~~~~vd~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~  224 (512)
                      |+.|+++|+++++.|+.+.++++.+.+.+.++++++ +.+  ++++|+...+ ..++.++++. +||.+..+.+.+....
T Consensus       102 g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~-l~~--~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~~~~~~~~  177 (418)
T 3r9b_A          102 PPDHTRLRGLVSKAFAPRVIKRLEPEITALVDQLLD-AVD--GPEFNLIDNLAYPLPVAVICR-LLGVPIEDEPKFSRAS  177 (418)
T ss_dssp             TTHHHHHHHHHHGGGSHHHHGGGHHHHHHHHHHHHH-TCC--SSEEEHHHHTTTHHHHHHHHH-HHTCCGGGHHHHHHHH
T ss_pred             CchHHHHHHHhhhhhCHHHHHHHHHHHHHHHHHHHh-hhc--cCCeehHHHHhCcCCHHHHHH-HcCCCHHHHHHHHHHH
Confidence            999999999999999999999999999999999999 753  3589987665 5899999999 8998875433322222


Q ss_pred             HHHHHHHHHhhhhcccccccccccCcchhhhHHHHHHHHHHHHHHHHHHhhhhhcccccccCCcHHHHHHHhcccccccc
Q 039293          225 TKMAYIVAKKKYKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKVVKKRESNVLTGEAESYGNDLLGILMRAYHSADETQ  304 (512)
Q Consensus       225 ~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~  304 (512)
                          ..+....  ...+.+ ..++....++..++.+.+.+++.+.+++++++        ...|+++.+++...+   +.
T Consensus       178 ----~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~--------~~~d~l~~ll~~~~~---~~  239 (418)
T 3r9b_A          178 ----ALLAAAL--DPFLAL-TGETSDLFDEQMKAGMWLRDYLRALIDERRRT--------PGEDLMSGLVAVEES---GD  239 (418)
T ss_dssp             ----HHHHHTT--SCHHHH-HSSCCTTHHHHHHHHHHHHHHHHHHHHHTTTS--------CCSSHHHHHHHHHHH---SS
T ss_pred             ----HHHHhhc--Cccccc-cccCHHHHHHHHHHHHHHHHHHHHHHHHHHhC--------CCccHHHHHHHhhhc---cC
Confidence                2221111  111111 22233445667788888999999999887755        357999999977332   45


Q ss_pred             CCCHHHHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhCCCCCChhhhccchhHHHHHHhhhccCCC
Q 039293          305 KISLDDLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARKEVLELLGQQNPSADNISRLKIVGMIINETLRLYPP  384 (512)
Q Consensus       305 ~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~  384 (512)
                      .++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++                 |++|||+|+||++|+
T Consensus       240 ~ls~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~~-----------------~l~a~i~E~lRl~p~  302 (418)
T 3r9b_A          240 QLTEDEIIATCNLLLIAGHETTVNLIANAALAMLRTPGQWAALAADGS-----------------RASAVIEETMRYDPP  302 (418)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHSTTHHHHHHHCGG-----------------GHHHHHHHHHHHSCS
T ss_pred             CCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCHHHHHHHHhChH-----------------hHHHHHHHHHHhCCc
Confidence            699999999999999999999999999999999999999999999853                 799999999999999


Q ss_pred             CccccceeccccccCCeeeCCCCEEEEccchhccCCCCcCCCCCCCCCCCCCCCCCccccCCCccccccCCCcccccchH
Q 039293          385 FVVFVREVKKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGEDFHLYKPERFAQGVPKATSNNMAAFLPFGLGPRTCVGFN  464 (512)
Q Consensus       385 ~~~~~R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~  464 (512)
                      ++.++|.+.+|++++||.||||+.|+++.+++||||++| +||++|+|||.          +. .++|||.|+|.|+|++
T Consensus       303 ~~~~~R~~~~d~~l~g~~Ip~G~~V~~~~~~~~rdp~~~-~dp~~F~p~R~----------~~-~~~~FG~G~r~C~G~~  370 (418)
T 3r9b_A          303 VQLVSRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIV-GAPDRFDPDRA----------QI-RHLGFGKGAHFCLGAP  370 (418)
T ss_dssp             BCCEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTCS----------CC-CCCTTCCGGGCCTTHH
T ss_pred             cccceeEeCCCeEECCEEECCCCEEEEChHHhcCCcccC-CCcCcCCCCCC----------CC-CCcCCCCcCccCccHH
Confidence            999999999999999999999999999999999999999 99999999992          12 6899999999999999


Q ss_pred             HHHHHHHHHHHHHHhhc-EEEeCCCCccCCCcceeeecCCCceEEEEeC
Q 039293          465 FTIIEAKIALSMILRRY-KFTLSPNYVHSPVPRITLCPQHGIQVMLRAL  512 (512)
Q Consensus       465 la~~~~~~~la~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  512 (512)
                      ||++|++++++.|+++| ++++.++.  ....+.+.++..+++|++.+|
T Consensus       371 lA~~e~~~~l~~ll~~f~~~~l~~~~--~~~~~~~~~~~~~lpv~~~~r  417 (418)
T 3r9b_A          371 LARLEATVALPALAARFPEARLSGEP--EYKRNLTLRGMSTLSIAVHHH  417 (418)
T ss_dssp             HHHHHHHHHHHHHHHHCTTCEECSCC--EECSCSSBCCEEECEEEC---
T ss_pred             HHHHHHHHHHHHHHHhCccceeCCCC--ccccCCcccCcceeEEEecCC
Confidence            99999999999999999 89997652  223345667888999999887


No 62 
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A*
Probab=100.00  E-value=2.7e-59  Score=455.45  Aligned_cols=347  Identities=18%  Similarity=0.227  Sum_probs=294.4

Q ss_pred             ccCchHHHHHHHHHhCCeEEEecC-CeeEEEecCHHHHHHHHhcCCCCCCCc----hhhhHh------hhcCceeccCCc
Q 039293           79 FPITEPHIYSWIKLYGTNFLMWHG-SQAELVVAEPKLIKEIMNNNRSFPKRE----PREYLK------LLGNGLVTTRGE  147 (512)
Q Consensus        79 ~~~~~~~~~~~~~kyG~vf~~~~~-~~~~vvv~dpe~i~~i~~~~~~~~~~~----~~~~~~------~~g~~l~~~~g~  147 (512)
                      ..+++.++.+|+++ |+||+++++ +.+.++|+||+.+++++.++ .|.+..    ......      ..+.++++.+|+
T Consensus        28 ~~dp~~~~~~l~~~-Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~  105 (417)
T 3tyw_A           28 PFAAPAEYAALRTD-DPVARVTLPTRREAWVVTRYDDVRELLSDP-RVSADIRRPGFPALGEGEQEAGARFRPFIRTDAP  105 (417)
T ss_dssp             TTSCCTHHHHHHHT-CTEEEEECTTSCEEEEECCHHHHHHHHHCT-TEECCSSSTTCCCSSTTTSTTSSSCCCGGGCCHH
T ss_pred             ccCchHHHHHHHhh-CCeeeeecCCCCCeEEEcCHHHHHHHHcCC-CcccCCccccccccccccccccccccchhhcCCc
Confidence            34667789999988 999999987 47899999999999999887 454422    111111      245788889999


Q ss_pred             hHHHHhhhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhcCCcccHHHHH-HHHhHhHhhhcccCccccccccHHHHHHH
Q 039293          148 KWLKKRKLAVNAFHAENLKNMIPDMIASVDMMLERWRDYEGKEIDAYREI-KVLTSEIISRTAFGSCYLEGENIFNMLTK  226 (512)
Q Consensus       148 ~w~~~Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~~~~vd~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~  226 (512)
                      .|+++|+++.+.|+...++.+.+.+.+.++++++.|.+. ++++|+..++ ..++.++++.+ ||.+.++.+.+..... 
T Consensus       106 ~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~-g~~~d~~~~~~~~~~~~vi~~~-~G~~~~~~~~~~~~~~-  182 (417)
T 3tyw_A          106 EHTRYRRMLLPAFTVRRVRAMRPAVQARVDEILDGMLAA-GGPVDLVSAYANAVSTSVICEL-LGIPRHDLEFFRDVTR-  182 (417)
T ss_dssp             HHHHHHHHHGGGGCHHHHHHTHHHHHHHHHHHHHHHHHH-CSSEEHHHHTHHHHHHHHHHHH-HTCCTTTTTHHHHHHH-
T ss_pred             HHHHHHHHHHhhhCHHHHHHHHHHHHHHHHHHHHHHHhh-CCCcchHHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHH-
Confidence            999999999999999999999999999999999999863 4479999988 57899999987 9998775443332221 


Q ss_pred             HHHHHHHhhhhcccccccccccCcchhhhHHHHHHHHHHHHHHHHHHhhhhhcccccccCCcHHHHHHHhccccccccCC
Q 039293          227 MAYIVAKKKYKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKVVKKRESNVLTGEAESYGNDLLGILMRAYHSADETQKI  306 (512)
Q Consensus       227 ~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l  306 (512)
                         .+..     ..+         ......++...+.+++.+.+++++++        ...|+++.+++...+   +..+
T Consensus       183 ---~~~~-----~~~---------~~~~~~~~~~~l~~~~~~~i~~r~~~--------~~~d~l~~ll~~~~~---~~~l  234 (417)
T 3tyw_A          183 ---ISGS-----RNS---------TAEQVSEALGGLFGLLGGLVAERREE--------PRDDLISKLVTDHLV---PGNV  234 (417)
T ss_dssp             ---HHHS-----SSS---------CTTHHHHHHHHHHHHHHHHHHHHHSS--------CCSSHHHHHHHHTTT---TTSS
T ss_pred             ---HHhc-----ccC---------CHHHHHHHHHHHHHHHHHHHHHHhhC--------CCCCHHHHHHHhccc---CCCC
Confidence               1110     011         12456778888899999999888764        357999999987654   2469


Q ss_pred             CHHHHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhCCCCCChhhhccchhHHHHHHhhhccCCCCc
Q 039293          307 SLDDLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARKEVLELLGQQNPSADNISRLKIVGMIINETLRLYPPFV  386 (512)
Q Consensus       307 ~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~  386 (512)
                      +++++..++..+++||+|||+++++|++++|++||++|+|+++|+                 .|++|||+|+||++|+++
T Consensus       235 s~~el~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~-----------------~~l~a~i~E~lRl~p~~~  297 (417)
T 3tyw_A          235 TTEQLLSTLGITINAGRETTTSMIALSTLLLLDRPELPAELRKDP-----------------DLMPAAVDELLRVLSVAD  297 (417)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTHHHHHHHHCG-----------------GGHHHHHHHHHHHHCSCT
T ss_pred             CHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCHHHHHHHHhCh-----------------HHHHHHHHHHHHhccccc
Confidence            999999999999999999999999999999999999999999985                 379999999999999999


Q ss_pred             c-ccceeccccccCCeeeCCCCEEEEccchhccCCCCcCCCCCCCCCCCCCCCCCccccCCCccccccCCCcccccchHH
Q 039293          387 V-FVREVKKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGEDFHLYKPERFAQGVPKATSNNMAAFLPFGLGPRTCVGFNF  465 (512)
Q Consensus       387 ~-~~R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~l  465 (512)
                      . ++|.+.+|++++||.||||+.|+++.+++||||++| +||++|+||||.          . .++|||.|+|.|+|++|
T Consensus       298 ~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~----------~-~~l~FG~G~r~C~G~~l  365 (417)
T 3tyw_A          298 SIPLRVAAEDIELSGRTVPADDGVIALLAGANHDPEQF-DDPERVDFHRTD----------N-HHVAFGYGVHQCVGQHL  365 (417)
T ss_dssp             TCCEEEESSCEECSSCEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTCSC----------C-CCCTTCCSTTCCSCHHH
T ss_pred             cCceeEeCCCeEECCEEECCCCEEEEehhhhcCChhhc-CCccccCCCCCC----------C-CCCCCCCCCccCcCHHH
Confidence            8 599999999999999999999999999999999999 999999999993          1 68999999999999999


Q ss_pred             HHHHHHHHHHHHHhhc-EEEeCC
Q 039293          466 TIIEAKIALSMILRRY-KFTLSP  487 (512)
Q Consensus       466 a~~~~~~~la~ll~~f-~~~~~~  487 (512)
                      |++|++++++.|+++| ++++.+
T Consensus       366 A~~e~~~~l~~ll~~fp~~~l~~  388 (417)
T 3tyw_A          366 ARLELEVALETLLRRVPTLRLAG  388 (417)
T ss_dssp             HHHHHHHHHHHHHHHCTTCEECS
T ss_pred             HHHHHHHHHHHHHHhCCcccccC
Confidence            9999999999999999 999974


No 63 
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A*
Probab=100.00  E-value=7.5e-60  Score=460.00  Aligned_cols=377  Identities=13%  Similarity=0.134  Sum_probs=305.2

Q ss_pred             ccccCchHHHHHHHHHhC-CeEEEecCCeeEEEecCHHHHHHHHhcCCCCCCCchhh---hHhhhcCceeccCCchHHHH
Q 039293           77 QIFPITEPHIYSWIKLYG-TNFLMWHGSQAELVVAEPKLIKEIMNNNRSFPKREPRE---YLKLLGNGLVTTRGEKWLKK  152 (512)
Q Consensus        77 ~~~~~~~~~~~~~~~kyG-~vf~~~~~~~~~vvv~dpe~i~~i~~~~~~~~~~~~~~---~~~~~g~~l~~~~g~~w~~~  152 (512)
                      .+..+++.++.++++++| +||++..++. .++|+||+.+++++.+...|.++....   .....+.+++..+|+.|+++
T Consensus        35 ~~~~dp~~~~~~lr~~~G~pv~~~~~~~~-~~vv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~~~~dg~~h~~~  113 (421)
T 3lxh_A           35 GLEQGFHEAWKRVQQPDTPPLVWTPFTGG-HWIATRGTLIDEIYRSPERFSSRVIWVPREAGEAYDMVPTKLDPPEHTPY  113 (421)
T ss_dssp             TGGGCHHHHHHHHCCTTCCSEEEESSTTS-EEEECSHHHHHHHHTCTTTEETTCCSSSHHHHHHCCCTTTTCCTTTHHHH
T ss_pred             hhhcChhHHHHHHHhcCCCCeEeccCCCC-eEEEcCHHHHHHHHcChhhccCCcccCCcccccccccCCccCCcHHHHHH
Confidence            344577888998887665 8999988764 899999999999997655775554221   22233467788899999999


Q ss_pred             hhhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhcCCcccHHHHH-HHHhHhHhhhcccCccccccccHHHHHHHHHHHH
Q 039293          153 RKLAVNAFHAENLKNMIPDMIASVDMMLERWRDYEGKEIDAYREI-KVLTSEIISRTAFGSCYLEGENIFNMLTKMAYIV  231 (512)
Q Consensus       153 Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~~~~vd~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~  231 (512)
                      |+++.+.|+...++++.+.+.+.++++++.|.+.  +.+|+...+ ..++.++++. +||.+.++.+.+.    .+...+
T Consensus       114 R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~--~~~d~~~~~~~~~~~~v~~~-~~G~~~~~~~~~~----~~~~~~  186 (421)
T 3lxh_A          114 RKAIDKGLNLAEIRKLEDQIRTIAVEIIEGFADR--GHCEFGSEFSTVFPVRVFLA-LAGLPVEDATKLG----LLANEM  186 (421)
T ss_dssp             HHHHHHHHSHHHHHTTHHHHHHHHHHHHHTTTTT--SEEEHHHHTTTTHHHHHHHH-HHTCCGGGHHHHH----HHHHHH
T ss_pred             HHHHhhhcCHHHHHHHHHHHHHHHHHHHHHHhhc--CCeehHHHHHHHHHHHHHHH-HcCCCHHHHHHHH----HHHHHH
Confidence            9999999999999999999999999999998653  589987776 5577777765 5897764332222    222221


Q ss_pred             HHhhhhcccccccccccCcchhhhHHHHHHHHHHHHHHHHHHhhhhhcccccccCCcHHHHHHHhccccccccCCCHHHH
Q 039293          232 AKKKYKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKVVKKRESNVLTGEAESYGNDLLGILMRAYHSADETQKISLDDL  311 (512)
Q Consensus       232 ~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i  311 (512)
                      ..        .. .++|....++..++.+.+.+++.+.++++++.        ...|+++.|+++..+   +..++++++
T Consensus       187 ~~--------~~-~~~p~~~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~dll~~ll~~~~~---~~~l~~~ei  246 (421)
T 3lxh_A          187 TR--------PS-GNTPEEQGRSLEAANKGFFEYVAPIIAARRGG--------SGTDLITRILNVEID---GKPMPDDRA  246 (421)
T ss_dssp             HS--------CC-CSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTC--------CCCSHHHHHHTSCBT---TBCCCHHHH
T ss_pred             hc--------cc-cCCCchhHHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHhhhcc---CCCCCHHHH
Confidence            11        01 12222234567788888999999999888765        457999999987543   457999999


Q ss_pred             HHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhCCCCCChhhhccchhHHHHHHhhhccCCCCccccce
Q 039293          312 IDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARKEVLELLGQQNPSADNISRLKIVGMIINETLRLYPPFVVFVRE  391 (512)
Q Consensus       312 ~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~  391 (512)
                      .+++..+++||+|||+++++|++++|++||++|+|+++|++                 |++|||+|+||++|++ .++|.
T Consensus       247 ~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~-----------------~l~a~i~E~lRl~p~~-~~~R~  308 (421)
T 3lxh_A          247 LGLVSLLLLGGLDTVVNFLGFMMIYLSRHPETVAEMRREPL-----------------KLQRGVEELFRRFAVV-SDARY  308 (421)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHCHH-----------------HHHHHHHHHHHHCCCB-EEEEE
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHHHHhCHHHHHHHHhCHH-----------------HHHHHHHHHHHhcCcc-CCcee
Confidence            99999999999999999999999999999999999999975                 7899999999999999 88999


Q ss_pred             eccccccCCeeeCCCCEEEEccchhccCCCCcCCCCCCCCCCCCCCCCCccccCCCccccccCCCcccccchHHHHHHHH
Q 039293          392 VKKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGEDFHLYKPERFAQGVPKATSNNMAAFLPFGLGPRTCVGFNFTIIEAK  471 (512)
Q Consensus       392 ~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~  471 (512)
                      +.+|++++||.||||+.|+++.+++||||++| +||++|+||||          +. .++|||+|+|.|+|++||++|++
T Consensus       309 ~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~-~dP~~F~PeR~----------~~-~~l~FG~G~r~C~G~~lA~~e~~  376 (421)
T 3lxh_A          309 VVSDMEFHGTMLKEGDLILLPTALHGLDDRHH-DDPMTVDLSRR----------DV-THSTFAQGPHRCAGMHLARLEVT  376 (421)
T ss_dssp             ECSCEEETTEEECTTCEEEEETHHHHTCTTTS-SSTTSCCTTCS----------CC-CCCTTCCGGGSCTTHHHHHHHHH
T ss_pred             eCCCeeECCEEECCCCEEEEchhhhCCChhhC-CCcCeeCCCCC----------CC-CCCCCCCcCccCcCHHHHHHHHH
Confidence            99999999999999999999999999999999 99999999995          12 78999999999999999999999


Q ss_pred             HHHHHHHhhc-EEEeCCCCccCCCcceeeecCCCceEEEEeC
Q 039293          472 IALSMILRRY-KFTLSPNYVHSPVPRITLCPQHGIQVMLRAL  512 (512)
Q Consensus       472 ~~la~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  512 (512)
                      ++++.|+++| ++++.++........++ +....++|++++|
T Consensus       377 ~~l~~ll~~fp~~~l~~~~~~~~~~~~~-~~~~~lpv~~~p~  417 (421)
T 3lxh_A          377 VMLQEWLARIPEFRLKDRAVPIYHSGIV-AAVENIPLEWEPQ  417 (421)
T ss_dssp             HHHHHHHHHCCCCEECTTCCCEEECSSB-CEEECCEEECCCC
T ss_pred             HHHHHHHHhCCCcEECCCCCceeccccc-cCceeeeEEEecc
Confidence            9999999999 99998764433323333 3334699998875


No 64 
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans}
Probab=100.00  E-value=2e-59  Score=460.11  Aligned_cols=380  Identities=16%  Similarity=0.167  Sum_probs=300.5

Q ss_pred             chHHHHHHHHHhCCeE--EEe-cCCeeEEEecCHHHHHHHHhcCCCCCCCchhh----h------Hhh------hcCcee
Q 039293           82 TEPHIYSWIKLYGTNF--LMW-HGSQAELVVAEPKLIKEIMNNNRSFPKREPRE----Y------LKL------LGNGLV  142 (512)
Q Consensus        82 ~~~~~~~~~~kyG~vf--~~~-~~~~~~vvv~dpe~i~~i~~~~~~~~~~~~~~----~------~~~------~g~~l~  142 (512)
                      ++..+.++ ++||||+  +++ +|+.+.++|++++.+++++++...|..++...    .      ...      .+.+++
T Consensus        47 p~~~~~~l-r~~gPV~~~~~~~~g~~~~~vvt~~~~v~~vl~~~~~fs~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~l~  125 (450)
T 3tkt_A           47 LLDRFDAL-RAEAPVAKVVAPDDEHEPFWLVSSFDGVMKASKDNATFLNNPKSTVFTLRVGEMMAKAITGGSPHLVESLV  125 (450)
T ss_dssp             HHHHHHHH-HHHCSEEEECCTTCSSCCEEEECSHHHHHHHHHCTTTEESSSSCSSCCCHHHHHHHHHHHTSCSCSSCCGG
T ss_pred             chHHHHHH-HhcCCeecccccCCCCCCEEEEecHHHHHHHHhCcccccCCCccccccccccccccccccccccccccCcc
Confidence            66778888 7899999  888 77788999999999999998776664443211    0      011      335788


Q ss_pred             ccCCchHHHHhhhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhcCCcccHHHHH-HHHhHhHhhhcccCccccccccHH
Q 039293          143 TTRGEKWLKKRKLAVNAFHAENLKNMIPDMIASVDMMLERWRDYEGKEIDAYREI-KVLTSEIISRTAFGSCYLEGENIF  221 (512)
Q Consensus       143 ~~~g~~w~~~Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~~~~vd~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~  221 (512)
                      ..+|+.|+++|+++.+.|+...++.+.+.++++++++++.|.+. ++++|+..++ ..++.++|+.+ ||.+.++.+.+.
T Consensus       126 ~~dg~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~-~~~~dl~~~~~~~~~~~vi~~l-~G~~~~~~~~~~  203 (450)
T 3tkt_A          126 QMDAPKHPKLRRLTQDWFMPKNLARLDGEIRKIANEAIDRMLGA-GEEGDFMALVAAPYPLHVVMQI-LGVPPEDEPKML  203 (450)
T ss_dssp             GCCTTHHHHHHHHHHTTTSHHHHGGGHHHHHHHHHHHHHHHHHT-CSEEEHHHHTTTHHHHHHHHHH-TTCCGGGHHHHH
T ss_pred             cCCCHHHHHHHHHhhhhhCHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEeeHHHHHHHHHHHHHHHH-cCCChhHHHHHH
Confidence            89999999999999999999999999999999999999999863 4689999888 69999999996 897654322222


Q ss_pred             HHHHHHHHHHHHhhhhccccccccccc--CcchhhhHHHHHHHHHHHHHHHHHHhhhhhcccccccCCcHHHHHHHhccc
Q 039293          222 NMLTKMAYIVAKKKYKLEIPGIGKLLK--TNDDIESDKLEQDIRDSIIKVVKKRESNVLTGEAESYGNDLLGILMRAYHS  299 (512)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~P~l~~~~~--~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~  299 (512)
                      +...    .+.........++. .++.  ....++..++.+.+.+++.+.+++++++        ...|+++.|++...+
T Consensus       204 ~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~dll~~ll~~~~~  270 (450)
T 3tkt_A          204 FLTQ----QMFGGQDEDMNKSG-LKDLPPEQISQIVAGAVAEFERYFAGLAAERRRN--------PTDDVATVIANAVVD  270 (450)
T ss_dssp             HHHH----TTSCCC-----------------HHHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHHTCEET
T ss_pred             HHHH----HHhccccchhhccc-cccccchhHHHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHhcccc
Confidence            2211    11110011111111 1111  1223556677788888999999888765        356899999977542


Q ss_pred             cccccCCCHHHHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhCCCCCChhhhccchhHHHHHHhhh
Q 039293          300 ADETQKISLDDLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARKEVLELLGQQNPSADNISRLKIVGMIINETL  379 (512)
Q Consensus       300 ~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~l~~l~a~i~E~l  379 (512)
                         +..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|+                 +|++|||+|+|
T Consensus       271 ---~~~ls~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~~l~~E~-----------------~~l~a~i~E~L  330 (450)
T 3tkt_A          271 ---GEPMSDRDTAGYYIITASAGHDTTSASSAGAALALARDPDLFARVKADR-----------------NLLPGIVEEAI  330 (450)
T ss_dssp             ---TEECCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCG-----------------GGHHHHHHHHH
T ss_pred             ---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHCH-----------------HHHHHHHHHHH
Confidence               3569999999999999999999999999999999999999999999985                 47999999999


Q ss_pred             ccCCCCccccceeccccccCCeeeCCCCEEEEccchhccCCCCcCCCCCCCCCCCCCCCCCccccCCCccccccCCCccc
Q 039293          380 RLYPPFVVFVREVKKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGEDFHLYKPERFAQGVPKATSNNMAAFLPFGLGPRT  459 (512)
Q Consensus       380 Rl~p~~~~~~R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~  459 (512)
                      |++|+++.++|.+++|++++||.||||+.|+++.+++||||++| +||++|+||||-          . .++|||.|+|.
T Consensus       331 Rl~pp~~~~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~~-~dP~~F~PeR~~----------~-~~l~FG~G~r~  398 (450)
T 3tkt_A          331 RWTTPVQHFMRTAATDTELCGQKIAAGDWLMLNYVAANHDPAQF-PEPRKFDPTRPA----------N-RHLAFGAGSHQ  398 (450)
T ss_dssp             HHHCSBCEEEEEESSSEEETTEEECTTCEEEEEHHHHHTCTTTS-SSTTSCCTTSCT----------T-CSSTTCCSTTC
T ss_pred             HhCCCccCcceeeCCCeeECCEEECCCCEEEEChHHhcCChhhC-CCcCeeCCCCCC----------C-CCCCCCCcCcc
Confidence            99999998899999999999999999999999999999999999 999999999952          1 67999999999


Q ss_pred             ccchHHHHHHHHHHHHHHHhhcE-EEeCCCCccCCCcceeeecCCCceEEEEe
Q 039293          460 CVGFNFTIIEAKIALSMILRRYK-FTLSPNYVHSPVPRITLCPQHGIQVMLRA  511 (512)
Q Consensus       460 C~G~~la~~~~~~~la~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  511 (512)
                      |+|++||++|++++++.|+++|+ +++.++....  .+...+....++|++++
T Consensus       399 C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~--~~~~~~g~~~lpv~~~~  449 (450)
T 3tkt_A          399 CLGLHLARLEMRVLLDVLLDRVDSLELAGEPKRV--NSTFVGGFKSLPMRWKA  449 (450)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHEEEEEESSCCEEC--CCSSBCCEEECEEEEEE
T ss_pred             CccHHHHHHHHHHHHHHHHHhCCCceeCCCcccc--cCcccCCcccceEEEec
Confidence            99999999999999999999998 7776432222  22233444578888875


No 65 
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina}
Probab=100.00  E-value=1.5e-59  Score=455.28  Aligned_cols=368  Identities=17%  Similarity=0.194  Sum_probs=299.0

Q ss_pred             cCchHHHHHHHHHhCCeEEEe-cCC-eeEEEecCHHHHHHHHhcCCCCCCCchhhhHh----h--h-cCceeccCCchHH
Q 039293           80 PITEPHIYSWIKLYGTNFLMW-HGS-QAELVVAEPKLIKEIMNNNRSFPKREPREYLK----L--L-GNGLVTTRGEKWL  150 (512)
Q Consensus        80 ~~~~~~~~~~~~kyG~vf~~~-~~~-~~~vvv~dpe~i~~i~~~~~~~~~~~~~~~~~----~--~-g~~l~~~~g~~w~  150 (512)
                      ++++.++.++.+ ||||+++. .|. .+.++|++++.+++++.+...|.++.......    .  . +.+++..+|+.|+
T Consensus        37 ~dp~~~~~~lr~-~gpV~~~~~~g~~~~~~vv~~~~~v~~vl~~~~~fs~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~  115 (415)
T 3mgx_A           37 LERHARWRELAA-EDAMVWSDPGSSPSGFWSVFSHRACAAVLAPSAPLTSEYGMMIGFDRDHPDNSGGRMMVVSEHEQHR  115 (415)
T ss_dssp             TTHHHHHHHHHH-HTCCEEECSSSSSSCEEEECSHHHHHHHSCTTSSEECTTCSSTTCCSSSCCTTTTTSGGGCCHHHHH
T ss_pred             CChhHHHHHHHh-cCCEeeccCCCCcCCEEEEecHHHHHHHHhChhhhcCCccccccccccccccccCCCccccCcHHHH
Confidence            356778888876 99999997 442 67999999999999997655565443211111    1  2 5568888999999


Q ss_pred             HHhhhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhcCCcccHHHHH-HHHhHhHhhhcccCccccccccHHHHHHHHHH
Q 039293          151 KKRKLAVNAFHAENLKNMIPDMIASVDMMLERWRDYEGKEIDAYREI-KVLTSEIISRTAFGSCYLEGENIFNMLTKMAY  229 (512)
Q Consensus       151 ~~Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~~~~vd~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~  229 (512)
                      ++|+++.+.|+...++++.+.+.+.++++++.|.+.  +++|+..++ ..++.++|+. +||.+.++.+    .+..+..
T Consensus       116 ~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~--~~~dl~~~~~~~~~~~vi~~-l~G~~~~~~~----~~~~~~~  188 (415)
T 3mgx_A          116 KLRKLVGPLLSRAAARKLAERVRIEVGDVLGRVLDG--EVCDAATAIGPRIPAAVVCE-ILGVPAEDED----MLIDLTN  188 (415)
T ss_dssp             HHHHHHGGGSSHHHHHHSHHHHHHHHHHHTTTSSSS--SCEESTTTTTTHHHHHHHHH-HHTCCGGGHH----HHHHHHH
T ss_pred             HHHHHhHhhhCHHHHHHHHHHHHHHHHHHHHHHHhc--CCcchHHHHHHHHHHHHHHH-HcCCCHHHHH----HHHHHHH
Confidence            999999999999999999999999999999998653  589999888 6799999998 5897654322    2222222


Q ss_pred             HHHHhhhhcccccccccccCcchhhhHHHHHHHHHHHHHHHHHHhhhhhcccccccCCcHHHHHHHhccccccccCCCHH
Q 039293          230 IVAKKKYKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKVVKKRESNVLTGEAESYGNDLLGILMRAYHSADETQKISLD  309 (512)
Q Consensus       230 ~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~  309 (512)
                      .+..    ...|.   +.+    ....++.+.+.+++.+.+++++++        ...|+++.|+++.       .++++
T Consensus       189 ~~~~----~~~~~---~~~----~~~~~~~~~l~~~~~~~i~~rr~~--------~~~dll~~ll~~~-------~ls~~  242 (415)
T 3mgx_A          189 HAFG----GEDEL---FDG----MTPRQAHTEILVYFDELITARRKE--------PGDDLVSTLVTDD-------DLTID  242 (415)
T ss_dssp             HHTS----CCC-------C----CCHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHHHCT-------TSCHH
T ss_pred             HHHc----ccCcc---cch----HHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHhCC-------CCCHH
Confidence            2111    11121   111    123467788899999999888765        3579999999763       68999


Q ss_pred             HHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhCCCCCChhhhccchhHHHHHHhhhccCCCCcccc
Q 039293          310 DLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARKEVLELLGQQNPSADNISRLKIVGMIINETLRLYPPFVVFV  389 (512)
Q Consensus       310 ~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~  389 (512)
                      ++..++..+++||+|||+++++|++++|++||++|+|+++|+                 +|++|||+|+||++|+++.++
T Consensus       243 el~~~~~~ll~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~-----------------~~l~a~i~E~LRl~pp~~~~~  305 (415)
T 3mgx_A          243 DVLLNCDNVLIGGNETTRHAITGAVHALATVPGLLTALRDGS-----------------ADVDTVVEEVLRWTSPAMHVL  305 (415)
T ss_dssp             HHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSTTHHHHHHHTS-----------------SCHHHHHHHHHHHHCCBCEEE
T ss_pred             HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCHHHHHHHHhCh-----------------HhHHHHHHHHHHhcCcccccc
Confidence            999999999999999999999999999999999999999984                 899999999999999999889


Q ss_pred             ceeccccccCCeeeCCCCEEEEccchhccCCCCcCCCCCCCCCCCCCCCCCccccCCCccccccCCCcccccchHHHHHH
Q 039293          390 REVKKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGEDFHLYKPERFAQGVPKATSNNMAAFLPFGLGPRTCVGFNFTIIE  469 (512)
Q Consensus       390 R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~  469 (512)
                      |.+++|++++||.||||+.|+++.+++||||++| +||++|+||||-          . .++|||.|+|.|+|++||++|
T Consensus       306 R~~~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~~-~dP~~F~P~R~~----------~-~~l~FG~G~r~C~G~~lA~~e  373 (415)
T 3mgx_A          306 RVTTADVTINGRDLPSGTPVVAWLPAANRDPAEF-DDPDTFLPGRKP----------N-RHITFGHGMHHCLGSALARIE  373 (415)
T ss_dssp             EEESSCEEETTEEECTTCEEEEEHHHHTTCTTTS-SSTTSCCTTCCS----------C-CCCTTCCGGGCCTTHHHHHHH
T ss_pred             eecCCCeeECCEEECCCCEEEechHHhCCChhhc-CCccccCCCCCC----------C-CCCCCCCCCccCcCHHHHHHH
Confidence            9999999999999999999999999999999999 999999999973          1 689999999999999999999


Q ss_pred             HHHHHHHHHhhc-EEEeCCCCccCCCcceeeecCCCceEEEEeC
Q 039293          470 AKIALSMILRRY-KFTLSPNYVHSPVPRITLCPQHGIQVMLRAL  512 (512)
Q Consensus       470 ~~~~la~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  512 (512)
                      ++++++.|+++| ++++..+....  .+...+....++|++++|
T Consensus       374 ~~~~l~~ll~~f~~~~l~~~~~~~--~~~~~~~~~~lpv~~~~R  415 (415)
T 3mgx_A          374 LSVVLRVLAERVSRVDLEREPAWL--RAIVVQGYRELPVRFTGR  415 (415)
T ss_dssp             HHHHHHHHHHHEEEEEECSCCEEC--SCSSBCCEEECEEEEEEC
T ss_pred             HHHHHHHHHHhCCCCccCCCcccc--cCCcccCceeeeEEEecC
Confidence            999999999999 89987442222  223445556899999988


No 66 
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Probab=100.00  E-value=3.3e-59  Score=451.41  Aligned_cols=368  Identities=15%  Similarity=0.184  Sum_probs=292.4

Q ss_pred             cccCchHHHHHHHHHhCCeEEEec-CCeeEEEecCHHHHHHHHhcCCCCC-C-Cchh--h-h-----HhhhcCceeccCC
Q 039293           78 IFPITEPHIYSWIKLYGTNFLMWH-GSQAELVVAEPKLIKEIMNNNRSFP-K-REPR--E-Y-----LKLLGNGLVTTRG  146 (512)
Q Consensus        78 ~~~~~~~~~~~~~~kyG~vf~~~~-~~~~~vvv~dpe~i~~i~~~~~~~~-~-~~~~--~-~-----~~~~g~~l~~~~g  146 (512)
                      +..+++..+.+| ++||+||++++ |+.+.++++||+.+++++.++. |. + ++..  . .     ....+.++++.  
T Consensus        14 ~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~-f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--   89 (396)
T 1n40_A           14 RGDRIPDAVAEL-RTREPIRKVRTITGAEAWLVSSYALCTQVLEDRR-FSMKETAAAGAPRLNALTVPPEVVNNMGNI--   89 (396)
T ss_dssp             CSSSCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHHTCTT-EESGGGGSTTCCCSSCCSSCGGGGGHHHHH--
T ss_pred             cccCccHHHHHH-HHhCCeeEeecCCCceEEEEecHHHHHHHHhCCC-cccccCccccccccccccCCchhhhhhhhH--
Confidence            345678889999 99999999997 7889999999999999998753 54 3 2211  1 1     12235556655  


Q ss_pred             chHHHHhhhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhcCCcccHHHHHH-HHhHhHhhhcccCccccccccHHHHHH
Q 039293          147 EKWLKKRKLAVNAFHAENLKNMIPDMIASVDMMLERWRDYEGKEIDAYREIK-VLTSEIISRTAFGSCYLEGENIFNMLT  225 (512)
Q Consensus       147 ~~w~~~Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~~~~vd~~~~~~-~~~~~~i~~~~fG~~~~~~~~~~~~~~  225 (512)
                       .|+++|+++.+.|+.. ++++.+.+.+.++++++.|.+. ++++|+..++. .++.++++. +||.+.++.+.+.+   
T Consensus        90 -~h~~~R~~~~~~fs~~-~~~~~~~i~~~~~~l~~~l~~~-~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~~~~~~---  162 (396)
T 1n40_A           90 -ADAGLRKAVMKAITPK-APGLEQFLRDTANSLLDNLITE-GAPADLRNDFADPLATALHCK-VLGIPQEDGPKLFR---  162 (396)
T ss_dssp             -HHTTCHHHHHHHTSSC-STTHHHHHHHHHHHHHHHHHHH-CSCEETTTTTHHHHHHHHHHH-HHTCCGGGHHHHHH---
T ss_pred             -HHHHHHHHHHHhhChH-HHHhHHHHHHHHHHHHHHHHhc-CCCccHHHHHHHHhHHHHHHH-HhCCChhhHHHHHH---
Confidence             9999999999999998 9999999999999999999763 46899987664 799999998 79987653222211   


Q ss_pred             HHHHHHHHhhhhcccccccccccCcchhhhHHHHHHHHHHHHHHHHHHhhhhhcccccccCCcHHHHHHHhccccccccC
Q 039293          226 KMAYIVAKKKYKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKVVKKRESNVLTGEAESYGNDLLGILMRAYHSADETQK  305 (512)
Q Consensus       226 ~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~  305 (512)
                       +...+    ...    . ...+   .++..++.+.+ +++.+.++    +      .....|+++.|++...+. .+..
T Consensus       163 -~~~~~----~~~----~-~~~p---~~~~~~~~~~~-~~~~~~i~----~------~~~~~dll~~ll~~~~~~-~~~~  217 (396)
T 1n40_A          163 -SLSIA----FMS----S-ADPI---PAAKINWDRDI-EYMAGILE----N------PNITTGLMGELSRLRKDP-AYSH  217 (396)
T ss_dssp             -THHHH----TBC----C-SSCC---HHHHHHHHHHH-HHHHHHHH----C------TTCCSHHHHHHHHHHTSG-GGTT
T ss_pred             -HHHHH----hcc----c-cCCC---HHHHHHHHHHH-HHHHHHHh----C------CCCCCCHHHHHHHhhccc-ccCC
Confidence             11111    000    0 0011   23455566666 77776665    1      112479999999875210 1457


Q ss_pred             CCHHHHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhCCCCCChhhhccchhHHHHHHhhhccCCCC
Q 039293          306 ISLDDLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARKEVLELLGQQNPSADNISRLKIVGMIINETLRLYPPF  385 (512)
Q Consensus       306 l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~  385 (512)
                      ++++++.+++..+++||+|||+++++|++++|++||++|+|+++|+                 .|++|||+|+||++|++
T Consensus       218 l~~~~i~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~-----------------~~l~a~i~E~lRl~p~~  280 (396)
T 1n40_A          218 VSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKP-----------------ELIPAGVEELLRINLSF  280 (396)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCG-----------------GGHHHHHHHHHHTCCCB
T ss_pred             CCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcChHHHHHHHhCH-----------------HHHHHHHHHHHhhCCCc
Confidence            9999999999999999999999999999999999999999999984                 37999999999999999


Q ss_pred             c-cccceeccccccCCeeeCCCCEEEEccchhccCCCCcCCCCCCCCCCCCCCCCCccccCCCccccccCCCcccccchH
Q 039293          386 V-VFVREVKKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGEDFHLYKPERFAQGVPKATSNNMAAFLPFGLGPRTCVGFN  464 (512)
Q Consensus       386 ~-~~~R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~  464 (512)
                      + .++|.+.+|++++||.||||+.|+++.+++||||++| +||++|+||||.+         . .++|||.|+|.|+|++
T Consensus       281 ~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~~---------~-~~~~FG~G~r~C~G~~  349 (396)
T 1n40_A          281 ADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHF-PNPGSIELDRPNP---------T-SHLAFGRGQHFCPGSA  349 (396)
T ss_dssp             CSCEEEEESSCEEETTEEECTTCEEEECHHHHHTCTTTS-SSTTSCCTTCSST---------T-CSSTTCCGGGCCTTHH
T ss_pred             ccccceecCCCeeECCEEECCCCEEEechHHhhCChhhC-CChhhCCCCCCCC---------C-CCCCCCCCCcCCCCHH
Confidence            9 6799999999999999999999999999999999999 9999999999973         1 6899999999999999


Q ss_pred             HHHHHHHHHHHHHHhhc-EEEeCCC-CccCCCcceeeecCCCceEEE
Q 039293          465 FTIIEAKIALSMILRRY-KFTLSPN-YVHSPVPRITLCPQHGIQVML  509 (512)
Q Consensus       465 la~~~~~~~la~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~v~~  509 (512)
                      ||++|++++++.|+++| ++++.++ .......+.+.+...+++|++
T Consensus       350 lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~  396 (396)
T 1n40_A          350 LGRRHAQIGIEALLKKMPGVDLAVPIDQLVWRTRFQRRIPERLPVLW  396 (396)
T ss_dssp             HHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCCSBSBCCBSCCEEEC
T ss_pred             HHHHHHHHHHHHHHHhCccccccCCccccccccccccCCcceeeeeC
Confidence            99999999999999999 5999764 222333445567777888874


No 67 
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A*
Probab=100.00  E-value=1.8e-58  Score=445.45  Aligned_cols=365  Identities=15%  Similarity=0.201  Sum_probs=299.1

Q ss_pred             ccccCchHHHHHHHHHhCCeEEEecCC----eeEEEecCHHHHHHHHhcCCCCCCCchhh---hHhhhcCceeccCCchH
Q 039293           77 QIFPITEPHIYSWIKLYGTNFLMWHGS----QAELVVAEPKLIKEIMNNNRSFPKREPRE---YLKLLGNGLVTTRGEKW  149 (512)
Q Consensus        77 ~~~~~~~~~~~~~~~kyG~vf~~~~~~----~~~vvv~dpe~i~~i~~~~~~~~~~~~~~---~~~~~g~~l~~~~g~~w  149 (512)
                      .+..+++.++.++ ++|||||++++++    .+.++|+||+.+++++.+...|.+++...   .....+.+++..+|+.|
T Consensus         9 ~~~~~p~~~~~~l-r~yGpv~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~   87 (384)
T 3oo3_A            9 RLRLDPVPEFEEL-QKAGPLHEYDTEPGMDGRKQWLVTGHDEVRAILADHERFSSMRPVDDEADRALLPGILQAYDPPDH   87 (384)
T ss_dssp             EETTEECHHHHHH-HHTCSEECCCCC------CEEEECCHHHHHHHHHCTTTEECSCCCC-----CCCTTCGGGCCTTHH
T ss_pred             ccccChhHHHHHH-HhcCCeeecccccccCCCCEEEEcCHHHHHHHHhCchhccCCccccccccccccccccccCCChhH
Confidence            3445678889999 5999999999886    78999999999999997655776655332   11223456777899999


Q ss_pred             HHHhhhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhcCCcccHHHHHHHHhHhHhhhcccCccccccccHHHHHHHHHH
Q 039293          150 LKKRKLAVNAFHAENLKNMIPDMIASVDMMLERWRDYEGKEIDAYREIKVLTSEIISRTAFGSCYLEGENIFNMLTKMAY  229 (512)
Q Consensus       150 ~~~Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~~~~vd~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~  229 (512)
                      +++|+++.+.|+..+++.+.+.+.+.++++++.|.+. ++++|+..++...+.+.+...+||.+.++.+.+.+....+. 
T Consensus        88 ~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~-~~~~d~~~~~~~~~~~~v~~~~~G~~~~~~~~~~~~~~~~~-  165 (384)
T 3oo3_A           88 TRLRRTVAPAYSARRMERLRPRIEEIVEECLDDFESV-GAPVDFVRHAAWPIPAYIACEFLGVPRDDQAELSRMIRESR-  165 (384)
T ss_dssp             HHHHHHHGGGGCHHHHHHHHHHHHHHHHHHHHHHHHS-CSSEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHhc-CCCccHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHh-
Confidence            9999999999999999999999999999999999753 45899999999888777777889988754333332222211 


Q ss_pred             HHHHhhhhcccccccccccCcchhhhHHHHHHHHHHHHHHHHHHhhhhhcccccccCCcHHHHHHHhccccccccCCCHH
Q 039293          230 IVAKKKYKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKVVKKRESNVLTGEAESYGNDLLGILMRAYHSADETQKISLD  309 (512)
Q Consensus       230 ~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~  309 (512)
                         .               ....+...++.+.+.+++.+.+++++++        ...|+++.+++..     +..++++
T Consensus       166 ---~---------------~~~~~~~~~~~~~~~~~~~~~i~~~~~~--------~~~d~l~~ll~~~-----~~~l~~~  214 (384)
T 3oo3_A          166 ---E---------------SRLPRQRTLSGLGIVNYTKRLTSGKRRD--------PGDGMIGVIVREH-----GAEISDE  214 (384)
T ss_dssp             ---H---------------CSCHHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHHHHH-----GGGSCHH
T ss_pred             ---c---------------cCChHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHHhc-----CCCCCHH
Confidence               1               1123456777888899999999887654        3579999999871     3478999


Q ss_pred             HHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhCCCCCChhhhccchhHHHHHHhhhccCCCCcc-c
Q 039293          310 DLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARKEVLELLGQQNPSADNISRLKIVGMIINETLRLYPPFVV-F  388 (512)
Q Consensus       310 ~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~-~  388 (512)
                      ++..++..+++||+|||+++++|++++|++||++|+|+++|++.                 ++|||+|+||++|+++. +
T Consensus       215 ~l~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~~~~l~~E~~~-----------------l~a~i~E~lRl~p~~~~~~  277 (384)
T 3oo3_A          215 ELAGLAEGNLIMAAEQMAAQLAVAVLLLVTHPDQMALLREKPEL-----------------IDSATEEVLRHASIVEAPA  277 (384)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHCGGG-----------------HHHHHHHHHHHHCSCSCCS
T ss_pred             HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHCHHHHHHHHhCHHH-----------------HHHHHHHHHHhCCcccCCc
Confidence            99999999999999999999999999999999999999999753                 89999999999999986 6


Q ss_pred             cceeccccccCCeeeCCCCEEEEccchhccCCCCcCCCCCCCCCCCCCCCCCccccCCCccccccCCCcccccchHHHHH
Q 039293          389 VREVKKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGEDFHLYKPERFAQGVPKATSNNMAAFLPFGLGPRTCVGFNFTII  468 (512)
Q Consensus       389 ~R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~  468 (512)
                      +|.+.+|++++||.||||+.|+++.+++||      +||++|+||||-          . .++|||.|+|.|+|++||++
T Consensus       278 ~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~r------~dp~~F~PeR~~----------~-~~~~FG~G~r~C~G~~lA~~  340 (384)
T 3oo3_A          278 PRVALADVRMAGRDIHAGDVLTCSMLATNR------APGDRFDITREK----------A-THMAFGHGIHHCIGAPLARL  340 (384)
T ss_dssp             CEEESSCEEETTEEECTTCEEEECHHHHHC------CTTCCCCTTCSC----------C-CCCTTCCSTTSCTTHHHHHH
T ss_pred             ceeeCCCEEECCEEECCCCEEEEehhhcCC------CCcceeCCCCCC----------C-CcCCCCCCCcCCCCHHHHHH
Confidence            999999999999999999999999999999      799999999962          2 68999999999999999999


Q ss_pred             HHHHHHHHHHhhc-EEEeCCCCccCC-Cc-ceeeecCCCceEEE
Q 039293          469 EAKIALSMILRRY-KFTLSPNYVHSP-VP-RITLCPQHGIQVML  509 (512)
Q Consensus       469 ~~~~~la~ll~~f-~~~~~~~~~~~~-~~-~~~~~~~~~~~v~~  509 (512)
                      |++++++.|+++| ++++.++..+.. .. +.+.+...+++|++
T Consensus       341 e~~~~l~~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~~lpv~~  384 (384)
T 3oo3_A          341 QLRVALPAVVGRFPSLRLAVPEEDLRFKPGRPAPFAVEELPLEW  384 (384)
T ss_dssp             HHHHHHHHHHHHCTTCEESSCGGGCCEECSSSSCCEESCCEEEC
T ss_pred             HHHHHHHHHHHhCCCCeeCCCCccceeecccccccCcceeeeeC
Confidence            9999999999999 999975533222 22 34556666777764


No 68 
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A*
Probab=100.00  E-value=5.2e-59  Score=450.60  Aligned_cols=340  Identities=14%  Similarity=0.254  Sum_probs=277.9

Q ss_pred             HHHHHHHHhCCeEEEecC-Ce---eEEEecCHHHHHHHHhcCCCCCCCch-------h--h-hHh-hhcCceeccCCchH
Q 039293           85 HIYSWIKLYGTNFLMWHG-SQ---AELVVAEPKLIKEIMNNNRSFPKREP-------R--E-YLK-LLGNGLVTTRGEKW  149 (512)
Q Consensus        85 ~~~~~~~kyG~vf~~~~~-~~---~~vvv~dpe~i~~i~~~~~~~~~~~~-------~--~-~~~-~~g~~l~~~~g~~w  149 (512)
                      .+..|+++ |+||+++++ +.   +.++|+||+.+++++..+..|..++.       .  . ... ..+.++++.+|+.|
T Consensus        18 ~~~~l~~~-Gpv~~~~~~~g~~~~~~vvv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~   96 (398)
T 1lfk_A           18 PADELLAA-GALTRVTIGSGADAETHWMATAHAVVRQVMGDHQQFSTRRRWDPRDEIGGKGIFRPRELVGNLMDYDPPEH   96 (398)
T ss_dssp             ECHHHHTS-CSEEEEC------CCCEEEECSHHHHHHHHHCTTTEEECTTCCC-------------CCTTCGGGCCTTHH
T ss_pred             hhHHHHhc-CCccccccCCCCcccceEEEecHHHHHHHHhhCcccccccccccccccCCcccccccccccCccccCCHHH
Confidence            34557666 999999875 44   79999999999999933334533322       1  1 111 23567888899999


Q ss_pred             HHHhhhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhcCCcccHHHHHHH-HhHhHhhhcccCccccccccHHHHHHHHH
Q 039293          150 LKKRKLAVNAFHAENLKNMIPDMIASVDMMLERWRDYEGKEIDAYREIKV-LTSEIISRTAFGSCYLEGENIFNMLTKMA  228 (512)
Q Consensus       150 ~~~Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~~~~vd~~~~~~~-~~~~~i~~~~fG~~~~~~~~~~~~~~~~~  228 (512)
                      +++|+++.+.|+...++.+.+.+.+.++++++.|.+. ++++|+..++.. ++.++++. +||.+.++.+.+..    +.
T Consensus        97 ~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~-~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~~~~~~----~~  170 (398)
T 1lfk_A           97 TRLRRKLTPGFTLRKMQRMAPYIEQIVNDRLDEMERA-GSPADLIAFVADKVPGAVLCE-LVGVPRDDRDMFMK----LC  170 (398)
T ss_dssp             HHHHHHHGGGGCHHHHHHHHHHHHHHHHHHHHHHHHH-CSSEEHHHHTTTTHHHHHHHH-HHTCCGGGHHHHHH----HH
T ss_pred             HHHHHHHHhhhCHHHHHHHHHHHHHHHHHHHHHHHhc-CCCccHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHH----HH
Confidence            9999999999999999999999999999999999753 458999999887 88999987 58987653222111    11


Q ss_pred             HHHHHhhhhcccccccccccCcchhhhHHHHHHHHHHHHHHHHHHhhhhhcccccccCCcHHHHHHHhccccccccCCCH
Q 039293          229 YIVAKKKYKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKVVKKRESNVLTGEAESYGNDLLGILMRAYHSADETQKISL  308 (512)
Q Consensus       229 ~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~  308 (512)
                         ...     +.    . + ...++..++.+.+.+++.+.++++++.        ...|+++.|+++.     +..+++
T Consensus       171 ---~~~-----~~----~-~-~~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~dll~~ll~~~-----~~~l~~  223 (398)
T 1lfk_A          171 ---HGH-----LD----A-S-LSQKRRAALGDKFSRYLLAMIARERKE--------PGEGMIGAVVAEY-----GDDATD  223 (398)
T ss_dssp             ---HHT-----TC----T-T-SCHHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHHHHH-----GGGSCH
T ss_pred             ---HHH-----Hh----c-c-cchHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHHhc-----CCCCCH
Confidence               110     10    0 0 113456677888899999999888764        2469999999764     236899


Q ss_pred             HHHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhCCCCCChhhhccchhHHHHHHhhhccCCCCc-c
Q 039293          309 DDLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARKEVLELLGQQNPSADNISRLKIVGMIINETLRLYPPFV-V  387 (512)
Q Consensus       309 ~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~-~  387 (512)
                      +++.+++..+++||+|||+++++|++++|++||++|+|+++|++                 |++|||+|+||++|+++ .
T Consensus       224 ~el~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~-----------------~l~a~i~E~lRl~p~~~~~  286 (398)
T 1lfk_A          224 EELRGFCVQVMLAGDDNISGMIGLGVLAMLRHPEQIDAFRGDEQ-----------------SAQRAVDELIRYLTVPYSP  286 (398)
T ss_dssp             HHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHSGGGGGGGSSCHH-----------------HHHHHHHHHHHHHCCBSCC
T ss_pred             HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHCHHHHHHHHhCHH-----------------HHHHHHHHHHHhCcccccc
Confidence            99999999999999999999999999999999999999999964                 69999999999999999 5


Q ss_pred             ccceeccccccCCeeeCCCCEEEEccchhccCCCCcCCCCCCCCCCCCCCCCCccccCCCccccccCCCcccccchHHHH
Q 039293          388 FVREVKKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGEDFHLYKPERFAQGVPKATSNNMAAFLPFGLGPRTCVGFNFTI  467 (512)
Q Consensus       388 ~~R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~  467 (512)
                      ++|.+.+|++++||.||||+.|+++.+++||||++| +||++|+||||.          . .++|||+|+|.|+|++||+
T Consensus       287 ~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~----------~-~~l~FG~G~r~C~G~~lA~  354 (398)
T 1lfk_A          287 TPRIAREDLTLAGQEIKKGDSVICSLPAANRDPALA-PDVDRLDVTREP----------I-PHVAFGHGVHHCLGAALAR  354 (398)
T ss_dssp             SCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTC-TTTTSCCTTSCC----------C-CCCTTCCSTTSCTTHHHHH
T ss_pred             cceecCCCeeECCEEECCCCEEEeChHHhCCCchhc-CCccccCCCCCC----------C-CCCCCCCCCCcCCCHHHHH
Confidence            799999999999999999999999999999999999 999999999983          1 5899999999999999999


Q ss_pred             HHHHHHHHHHHhhc-EEEeCC
Q 039293          468 IEAKIALSMILRRY-KFTLSP  487 (512)
Q Consensus       468 ~~~~~~la~ll~~f-~~~~~~  487 (512)
                      +|++++++.|+++| ++++.+
T Consensus       355 ~e~~~~l~~ll~~f~~~~l~~  375 (398)
T 1lfk_A          355 LELRTVFTELWRRFPALRLAD  375 (398)
T ss_dssp             HHHHHHHHHHHHHCTTCEESS
T ss_pred             HHHHHHHHHHHHhCCCCEeCC
Confidence            99999999999999 799864


No 69 
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida}
Probab=100.00  E-value=8.7e-58  Score=444.86  Aligned_cols=373  Identities=15%  Similarity=0.162  Sum_probs=300.1

Q ss_pred             CchHHHHHHHHHhCCeEEEec-CCeeEEEecCHHHHHHHHhcCCCCCCCch---hh---------hHhhhcCceeccCCc
Q 039293           81 ITEPHIYSWIKLYGTNFLMWH-GSQAELVVAEPKLIKEIMNNNRSFPKREP---RE---------YLKLLGNGLVTTRGE  147 (512)
Q Consensus        81 ~~~~~~~~~~~kyG~vf~~~~-~~~~~vvv~dpe~i~~i~~~~~~~~~~~~---~~---------~~~~~g~~l~~~~g~  147 (512)
                      +++.++.++.++ |||+++.. ++.+.++|++++.+++++.+...|++...   ..         .....+.+++..+|+
T Consensus        39 ~p~~~~~~lr~~-gpv~~~~~~~~~~~~vvt~~~~v~~vl~d~~~fs~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~  117 (426)
T 3rwl_A           39 SVGEYFKRLRKD-DPVHYCADSAFGPYWSITKYNDIMHVDTNHDIFSSDAGYGGIIIDDGIQKGGDGGLDLPNFIAMDRP  117 (426)
T ss_dssp             CHHHHHHHHHHH-CSEEEESCCTTCSEEEECSHHHHHHHHHCTTTEECCGGGTCSSSSCCC-------CCCCCGGGCCTT
T ss_pred             CccHHHHHHHhc-CCeeeccCCCCCCEEEEcCHHHHHHHHcCCcccccccccCCCCcccccccccccccccCcccccCch
Confidence            467788888765 99999987 45679999999999999988766654331   00         112234567888999


Q ss_pred             hHHHHhhhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhcCCcccHHHHH-HHHhHhHhhhcccCccccccccHHHHHHH
Q 039293          148 KWLKKRKLAVNAFHAENLKNMIPDMIASVDMMLERWRDYEGKEIDAYREI-KVLTSEIISRTAFGSCYLEGENIFNMLTK  226 (512)
Q Consensus       148 ~w~~~Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~~~~vd~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~  226 (512)
                      .|+++|+++.+.|+...++.+.+.+.+.++++++.|..  ++++|+...+ ..++.++++. +||.+..+.+.+    ..
T Consensus       118 ~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~--~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~~~~~----~~  190 (426)
T 3rwl_A          118 RHDEQRKAVSPIVAPANLAALEGTIRERVSKTLDGLPV--GEEFDWVDRVSIEITTQMLAT-LFDFPFEERRKL----TR  190 (426)
T ss_dssp             HHHHHHHHHGGGGCHHHHHHHHHHHHHHHHHHHHTSCS--SSCEEHHHHTHHHHHHHHHHH-HHTCCGGGTHHH----HH
T ss_pred             HHHHHHHHhhhhhCHHHHHHHHHHHHHHHHHHHHHhhc--CCCcchHHHHHHHHHHHHHHH-HcCCCHHHHHHH----HH
Confidence            99999999999999999999999999999999999843  3689988887 5788888776 899865543322    22


Q ss_pred             HHHHHHHhhhhcccccccccccCcchhhhHHHHHHHHHHHHHHHHHHhhhhhcccccccCCcHHHHHHHhccccccccCC
Q 039293          227 MAYIVAKKKYKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKVVKKRESNVLTGEAESYGNDLLGILMRAYHSADETQKI  306 (512)
Q Consensus       227 ~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l  306 (512)
                      +...+.    ....+.     .........++...+.+++.+.+++++..       ....|+++.|++...+    ..+
T Consensus       191 ~~~~~~----~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~~dll~~ll~~~~~----~~l  250 (426)
T 3rwl_A          191 WSDVTT----AAPGGG-----VVESWDQRKTELLECAAYFQVLWNERVNK-------DPGNDLISMLAHSPAT----RNM  250 (426)
T ss_dssp             HHHHHT----CCTTSS-----SCSSHHHHHHHHHHHHHHHHHHHHHHHTS-------CCCSSHHHHHHHCGGG----GGC
T ss_pred             HHHHHH----hccCcc-----ccccHHHHHHHHHHHHHHHHHHHHHHhhc-------CCCCCHHHHHHhcccC----CCC
Confidence            221111    111111     11223455667788888999988887432       2457999999987543    358


Q ss_pred             CHHHHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhCCCCCChhhhccchhHHHHHHhhhccCCCCc
Q 039293          307 SLDDLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARKEVLELLGQQNPSADNISRLKIVGMIINETLRLYPPFV  386 (512)
Q Consensus       307 ~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~  386 (512)
                      +++++.+++..+++||+|||+++++|++++|++||++|+++++|+                 +|++|||+|+||++|+++
T Consensus       251 s~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~E~-----------------~~l~a~i~E~LRl~p~~~  313 (426)
T 3rwl_A          251 TPEEYLGNVLLLIVGGNDTTRNSMTGGVLALHKNPDQFAKLKANP-----------------ALVETMVPEIIRWQTPLA  313 (426)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCG-----------------GGHHHHHHHHHHHHCSBC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhCh-----------------HhHHHHHHHHHHhcCccc
Confidence            999999999999999999999999999999999999999999983                 589999999999999999


Q ss_pred             cccceeccccccCCeeeCCCCEEEEccchhccCCCCcCCCCCCCCCCCCCCCCCccccCCCccccccCCCcccccchHHH
Q 039293          387 VFVREVKKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGEDFHLYKPERFAQGVPKATSNNMAAFLPFGLGPRTCVGFNFT  466 (512)
Q Consensus       387 ~~~R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la  466 (512)
                      .++|.+++|++++||.||||+.|+++.+++||||++| +||++|+|+||.+.          .++|||.|+|.|+|++||
T Consensus       314 ~~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~f-~dP~~F~p~R~~~~----------~~l~FG~G~r~C~G~~lA  382 (426)
T 3rwl_A          314 HMRRTAIADSELGGKTIRKGDKVVMWYYSGNRDDEVI-DRPEEFIIDRPRPR----------QHLSFGFGIHRCVGNRLA  382 (426)
T ss_dssp             CEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTCSCTT----------CCSTTCCSTTSCSSHHHH
T ss_pred             cCceecCCCeEECCEEECCCCEEEechHHhCCCcccc-CCcCccCCCCCCCC----------CccCCCCCCcCCccHHHH
Confidence            9999999999999999999999999999999999999 99999999999542          689999999999999999


Q ss_pred             HHHHHHHHHHHHhhc-EEEeCCCCccCCCcceeeecCCCceEEEEe
Q 039293          467 IIEAKIALSMILRRY-KFTLSPNYVHSPVPRITLCPQHGIQVMLRA  511 (512)
Q Consensus       467 ~~~~~~~la~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  511 (512)
                      ++|++++++.|+++| ++++.++.....  +...+...+++|+++|
T Consensus       383 ~~e~~~~l~~ll~~f~~~~l~~~~~~~~--~~~~~g~~~lpv~~~P  426 (426)
T 3rwl_A          383 EMQLRILWEEILTRFSRIEVMAEPERVR--SNFVRGYAKMMVRVHA  426 (426)
T ss_dssp             HHHHHHHHHHHHTTCSEEEECSCCEECC--CSSBCCEEECEEEEEC
T ss_pred             HHHHHHHHHHHHHhCccCeeCCCCcccc--cccccCcceeeEEEeC
Confidence            999999999999999 999975533322  2344556678898875


No 70 
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Probab=100.00  E-value=3e-58  Score=439.74  Aligned_cols=349  Identities=18%  Similarity=0.196  Sum_probs=285.4

Q ss_pred             HHHHHHHHHhCCeEEEecCCeeEEEecCHHHHHHHHhcCCCCCCCc--hh-hh-----H-hhhc----CceeccCCchHH
Q 039293           84 PHIYSWIKLYGTNFLMWHGSQAELVVAEPKLIKEIMNNNRSFPKRE--PR-EY-----L-KLLG----NGLVTTRGEKWL  150 (512)
Q Consensus        84 ~~~~~~~~kyG~vf~~~~~~~~~vvv~dpe~i~~i~~~~~~~~~~~--~~-~~-----~-~~~g----~~l~~~~g~~w~  150 (512)
                      ..+.++ ++|||||++. |   .+++++|+.+++++.+.+.|.+++  .. ..     . .+.|    .++++.+|+.|+
T Consensus         3 ~~~~~l-r~~gpv~~~~-g---~~vv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~   77 (367)
T 3b4x_A            3 DWFKQM-RKESPVYYDG-K---VWNLFKYEDCKMVLNDHKRFSSNLTGYNDKLEMLRSGKVFFDIPTRYTMLTSDPPLHD   77 (367)
T ss_dssp             HHHHHH-HHHCSEEECS-S---SEEECSHHHHHHHHHCTTTEECCCSSTTTTHHHHHHTCCCCCCGGGSSGGGCCTTHHH
T ss_pred             HHHHHH-HHcCCceeeC-C---EEEEecHHHHHHHHcCchhhccCcccccccccccccccchhhcccccccccCCchhHH
Confidence            456666 5799999888 3   799999999999998765675553  11 12     2 3445    778888999999


Q ss_pred             HHhhhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhcCCcccHHHHH-HHHhHhHhhhcccCccccccccHHHHHHHHHH
Q 039293          151 KKRKLAVNAFHAENLKNMIPDMIASVDMMLERWRDYEGKEIDAYREI-KVLTSEIISRTAFGSCYLEGENIFNMLTKMAY  229 (512)
Q Consensus       151 ~~Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~~~~vd~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~  229 (512)
                      ++|+++++.|+...++.  +.+++.++++++.|.    +++|+..++ ..++.++++. +||.+ ++.+.+..    +..
T Consensus        78 ~~R~~~~~~fs~~~l~~--~~i~~~~~~l~~~l~----g~~d~~~~~~~~~~~~vi~~-~~G~~-~~~~~~~~----~~~  145 (367)
T 3b4x_A           78 ELRNLTADAFNPSNLPV--DFVREVTVKLLSELD----EEFDVIESFAIPLPILVISK-MLGIN-PDVKKVKD----WSD  145 (367)
T ss_dssp             HHHHTTGGGGSGGGSCH--HHHHHHHHHHHHTCC----SEEEHHHHTTTHHHHHHHHH-HHTCC-CCHHHHHH----HHH
T ss_pred             HHHHHHHHhcCHhhhcc--hHHHHHHHHHHHhcc----CCcchHHHHHHhhHHHHHHH-HcCCC-CcHHHHHH----HHH
Confidence            99999999999998877  999999999999986    469999775 7999999999 79998 43222222    222


Q ss_pred             HHHHhhhhcccccccccccCcchhhhHHHHHHHHHHHHHHHHHHhhhhhcccccccCCcHHHHHHHhccccccccCCCHH
Q 039293          230 IVAKKKYKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKVVKKRESNVLTGEAESYGNDLLGILMRAYHSADETQKISLD  309 (512)
Q Consensus       230 ~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~  309 (512)
                      .+...  ....|..        .+.. ++.+.+.+++.+.+++++++        ...|+++.+++.        .++++
T Consensus       146 ~~~~~--~~~~p~~--------~~~~-~~~~~~~~~~~~~i~~r~~~--------~~~dll~~ll~~--------~ls~~  198 (367)
T 3b4x_A          146 LVALR--LGRADEI--------FSIG-RKYLELISFSKKELDSRKGK--------EIVDLTGKIANS--------NLSEL  198 (367)
T ss_dssp             HHHTT--TTSTTGG--------GCCC-HHHHHHHHHHHHHHHHHTTT--------CCSSHHHHHHTS--------SSCHH
T ss_pred             HHHhc--cCCChhh--------HHHH-HHHHHHHHHHHHHHHHHhcC--------CCCCHHHHHHhc--------cCCHH
Confidence            21111  0011211        1223 67788888999998887754        346999999865        57999


Q ss_pred             HHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhCCCCCChhhhccchhHHHHHHhhhccCCCCcccc
Q 039293          310 DLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARKEVLELLGQQNPSADNISRLKIVGMIINETLRLYPPFVVFV  389 (512)
Q Consensus       310 ~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~  389 (512)
                      ++.+++..+++||+|||+++++|++++|++ |++|+|+++|++                   +|||+|+||++|+++.++
T Consensus       199 el~~~~~~l~~AG~eTt~~~l~~~l~~L~~-P~~~~~l~~e~~-------------------~a~i~E~lRl~p~~~~~~  258 (367)
T 3b4x_A          199 EKEGYFILLMIAGNETTTNLIGNAIEDFTL-YNSWDYVREKGA-------------------LKAVEEALRFSPPVMRTI  258 (367)
T ss_dssp             HHHHHHHHHHHTTTHHHHHHHHHHHHHHHH-TTCHHHHHHHCS-------------------HHHHHHHHHHSCSBCCEE
T ss_pred             HHHHHHHHHHHhhhHHHHHHHHHHHHHHhC-HHHHHHHHhCCc-------------------hHHHHHHHHhcCcccCee
Confidence            999999999999999999999999999999 999999999952                   899999999999999779


Q ss_pred             ceeccccccCCeeeCCCCEEEEccchhccCCCCcCCCCCCCCCCCCCCCCCccccCCCccccccCCCcccccchHHHHHH
Q 039293          390 REVKKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGEDFHLYKPERFAQGVPKATSNNMAAFLPFGLGPRTCVGFNFTIIE  469 (512)
Q Consensus       390 R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~  469 (512)
                      |.+.+|++++||.||||+.|+++.+++||||++| +||++|+||||.          . .++|||+|+|.|+|++||++|
T Consensus       259 R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~-~dp~~F~PeR~~----------~-~~l~FG~G~r~C~G~~lA~~e  326 (367)
T 3b4x_A          259 RVTKEKVKIRDQVIDEGELVRVWIASANRDEEVF-KDPDSFIPDRTP----------N-PHLSFGSGIHLCLGAPLARLE  326 (367)
T ss_dssp             EEESSCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTCSS----------C-CCCTTCCSTTSCTTHHHHHHH
T ss_pred             EEeCCCeEECCEEECCCCEEEEChhhhcCCcccC-CCccccCCCCCC----------C-CCcCCCCCCccCccHHHHHHH
Confidence            9999999999999999999999999999999999 999999999984          1 689999999999999999999


Q ss_pred             HHHHHHHHHhhc-EEEeCCCCccCCCcceeeecCCCceEEEEe
Q 039293          470 AKIALSMILRRY-KFTLSPNYVHSPVPRITLCPQHGIQVMLRA  511 (512)
Q Consensus       470 ~~~~la~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  511 (512)
                      ++++++.|+++| ++++.++ ...  .+.+.+...+++|++++
T Consensus       327 ~~~~l~~ll~~f~~~~l~~~-~~~--~~~~~~~~~~lpv~~~~  366 (367)
T 3b4x_A          327 ARIALEEFAKKFRVKEIVKK-EKI--DNEVLNGYRKLVVRVER  366 (367)
T ss_dssp             HHHHHHHHHHHEEEEEEEEE-EEC--CCSSBCSEEEEEEEEEE
T ss_pred             HHHHHHHHHHhCCCceeCCc-ccc--ccccccCcceEEEEecC
Confidence            999999999999 6999764 222  23445666789999876


No 71 
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A*
Probab=100.00  E-value=2.8e-57  Score=433.76  Aligned_cols=351  Identities=20%  Similarity=0.259  Sum_probs=280.6

Q ss_pred             hHHHHHHHHHhCCeEEEecCCeeEEEecCHHHHHHHHhcCCCCCCCch-----hh-h--Hh--h---hcCceeccCCchH
Q 039293           83 EPHIYSWIKLYGTNFLMWHGSQAELVVAEPKLIKEIMNNNRSFPKREP-----RE-Y--LK--L---LGNGLVTTRGEKW  149 (512)
Q Consensus        83 ~~~~~~~~~kyG~vf~~~~~~~~~vvv~dpe~i~~i~~~~~~~~~~~~-----~~-~--~~--~---~g~~l~~~~g~~w  149 (512)
                      +..+.++ ++|||||++  |  +.++++|++.+++++.+...|.+++.     .. .  ..  +   .|.++++.+|+.|
T Consensus         2 ~~~~~~l-r~~Gpv~~~--g--~~~vv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~h   76 (368)
T 1io7_A            2 YDWFSEM-RKKDPVYYD--G--NIWQVFSYRYTKEVLNNFSKFSSDLTGYHERLEDLRNGKIRFDIPTRYTMLTSDPPLH   76 (368)
T ss_dssp             HHHHHHH-HHHCSEEEC--S--SCEEECSHHHHHHHHHCTTTEECCCSSHHHHHHHHTTTCCCCSCGGGSSGGGCCTTHH
T ss_pred             CHHHHHH-HhcCCeEeE--C--CEEEEecHHHHHHHHcCcccccccccccccccccccccccccccccccccccCCChHH
Confidence            3456777 589999876  4  48999999999999998656766542     11 1  12  1   2367888899999


Q ss_pred             HHHhhhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhcCCcccHHHHH-HHHhHhHhhhcccCccccccccHHHHHHHHH
Q 039293          150 LKKRKLAVNAFHAENLKNMIPDMIASVDMMLERWRDYEGKEIDAYREI-KVLTSEIISRTAFGSCYLEGENIFNMLTKMA  228 (512)
Q Consensus       150 ~~~Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~~~~vd~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~  228 (512)
                      +++|+++.+.|+...++.+.+.+.+.++++++.| +  ++++|+..++ ..++.++++.+ ||.+.++.+.    +..+.
T Consensus        77 ~~~R~~~~~~f~~~~~~~~~~~i~~~~~~l~~~l-~--~g~~d~~~~~~~~~~~~vi~~~-~G~~~~~~~~----~~~~~  148 (368)
T 1io7_A           77 DELRSMSADIFSPQKLQTLETFIRETTRSLLDSI-D--PREDDIVKKLAVPLPIIVISKI-LGLPIEDKEK----FKEWS  148 (368)
T ss_dssp             HHHHGGGTTTTCHHHHHHHHHHHHHHHHHHHHTC-C--TTSEEHHHHTTTHHHHHHHHHH-HTCCGGGHHH----HHHHG
T ss_pred             HHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHh-h--cCCccHHHHHHHHHHHHHHHHH-hCCCHHHHHH----HHHHH
Confidence            9999999999999999999999999999999999 4  3589999877 78999999999 9987653221    11111


Q ss_pred             HHHHHhhhhcccccccccccCcchhhhHHHHHHHHHHHHHHHHHHhhhhhcccccccCCcHHHHHHHhccccccccCCCH
Q 039293          229 YIVAKKKYKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKVVKKRESNVLTGEAESYGNDLLGILMRAYHSADETQKISL  308 (512)
Q Consensus       229 ~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~  308 (512)
                          .......     . .|. ..++..++.+.+.+++.+.+     +        ...|+++.+++.        .+++
T Consensus       149 ----~~~~~~~-----~-~p~-~~~~~~~~~~~~~~~~~~~i-----~--------~~~d~l~~ll~~--------~l~~  196 (368)
T 1io7_A          149 ----DLVAFRL-----G-KPG-EIFELGKKYLELIGYVKDHL-----N--------SGTEVVSRVVNS--------NLSD  196 (368)
T ss_dssp             ----GGCTTSC-----C-CTT-CHHHHHHHHHHHHHHHHHHT-----T--------SSCHHHHHHHTS--------SCCH
T ss_pred             ----HHHHhcc-----C-ChH-HHHHHHHHHHHHHHHHHHHh-----C--------CCCCHHHHHHhc--------cCCH
Confidence                0001100     0 111 12334455555666665555     1        246899999854        5799


Q ss_pred             HHHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhCCCCCChhhhccchhHHHHHHhhhccCCCCccc
Q 039293          309 DDLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARKEVLELLGQQNPSADNISRLKIVGMIINETLRLYPPFVVF  388 (512)
Q Consensus       309 ~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~  388 (512)
                      +++.+++.++++||+|||+++++|++++|++|| +|+|+++| +                 |++|||+|+||++|+++++
T Consensus       197 ~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P-~~~~l~~E-~-----------------~l~a~i~E~lRl~p~~~~~  257 (368)
T 1io7_A          197 IEKLGYIILLLIAGNETTTNLISNSVIDFTRFN-LWQRIREE-N-----------------LYLKAIEEALRYSPPVMRT  257 (368)
T ss_dssp             HHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTT-CHHHHHHH-T-----------------CHHHHHHHHHHHSCSBCCE
T ss_pred             HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCh-HHHHHHhc-c-----------------hHHHHHHHHHHhCcccccC
Confidence            999999999999999999999999999999999 99999998 2                 6899999999999999977


Q ss_pred             cceeccccccCCeeeCCCCEEEEccchhccCCCCcCCCCCCCCCCCCCCCCCccccCCCccccccCCCcccccchHHHHH
Q 039293          389 VREVKKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGEDFHLYKPERFAQGVPKATSNNMAAFLPFGLGPRTCVGFNFTII  468 (512)
Q Consensus       389 ~R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~  468 (512)
                      +|.+.+|++++||.||||+.|+++.+++||||++| +||++|+|||+  +        . .++|||.|+|.|+|++||++
T Consensus       258 ~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~--~--------~-~~~~FG~G~r~C~G~~lA~~  325 (368)
T 1io7_A          258 VRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVF-HDGEKFIPDRN--P--------N-PHLSFGSGIHLCLGAPLARL  325 (368)
T ss_dssp             EEEESSCEEETTEEECTTCEEEECHHHHTTCTTTS-TTTTSCCTTCC--S--------C-CCCTTCCGGGSCTTHHHHHH
T ss_pred             ceeeCCCeeECCEEECCCCEEEecHhhhCCChhhC-CCcceeCCCCC--C--------C-CCcCCCCCccCCCCHHHHHH
Confidence            99999999999999999999999999999999999 99999999993  1        2 68999999999999999999


Q ss_pred             HHHHHHHHHHhhcE-EEeCCCCccCCCcceeeecCCCceEEEEeC
Q 039293          469 EAKIALSMILRRYK-FTLSPNYVHSPVPRITLCPQHGIQVMLRAL  512 (512)
Q Consensus       469 ~~~~~la~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  512 (512)
                      |++++++.|+++|+ +++.+ ...  ....+.++..+++|++++|
T Consensus       326 e~~~~l~~ll~~f~~~~~~~-~~~--~~~~~~~~~~~lpv~~~~r  367 (368)
T 1io7_A          326 EARIAIEEFSKRFRHIEILD-TEK--VPNEVLNGYKRLVVRLKSN  367 (368)
T ss_dssp             HHHHHHHHHHTTCSEEEEEE-EEE--CCCSSBCCEEEEEEEEEC-
T ss_pred             HHHHHHHHHHHhCCCCEecC-cee--ccCCcccCCceeEEEeccC
Confidence            99999999999996 99865 111  2233456667899999987


No 72 
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Probab=100.00  E-value=1.7e-57  Score=442.17  Aligned_cols=370  Identities=16%  Similarity=0.228  Sum_probs=294.3

Q ss_pred             cCchHHHHHHHHHhCCeEEEecCCeeEEEecCHHHHHHHHhcCCCCCCCch--h--------hhHhhhcCceeccCCchH
Q 039293           80 PITEPHIYSWIKLYGTNFLMWHGSQAELVVAEPKLIKEIMNNNRSFPKREP--R--------EYLKLLGNGLVTTRGEKW  149 (512)
Q Consensus        80 ~~~~~~~~~~~~kyG~vf~~~~~~~~~vvv~dpe~i~~i~~~~~~~~~~~~--~--------~~~~~~g~~l~~~~g~~w  149 (512)
                      .+++.+  ++.++||+|+.+++|+.. ++|++++.+++++.++. +.....  .        ......+.+++..+|+.|
T Consensus        33 ~~P~~~--~~lr~~gpv~~~~~g~~~-~vv~~~~~v~~vL~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h  108 (416)
T 3p3o_A           33 NFSWDS--PEVAEAREKSWIARTPLA-LLVLRYAEADQLARDKR-LISGFRGLVDMVGTPEGPVRDFMVDFLQSLDGADH  108 (416)
T ss_dssp             TCCTTS--HHHHHHHHHCSEEECSSS-EEECSHHHHHHHHHCTT-EECSHHHHHHHHTCCSSHHHHHHHHSGGGCCHHHH
T ss_pred             cCCchH--HHHHHhCCccccccCCCc-eEEeCHHHHHHHHcCcc-cccCCccccccccccccchhhhhcCccccCCchHH
Confidence            345556  566789999999988776 99999999999998775 322211  0        112234567889999999


Q ss_pred             HHHhhhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhcCCcccHHHHH-HHHhHhHhhhcccCccccccccHHHHHHHHH
Q 039293          150 LKKRKLAVNAFHAENLKNMIPDMIASVDMMLERWRDYEGKEIDAYREI-KVLTSEIISRTAFGSCYLEGENIFNMLTKMA  228 (512)
Q Consensus       150 ~~~Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~~~~vd~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~  228 (512)
                      +++||++++.|+...++++.+.+++.++++++.| .  ++++|+...+ ..++.++++. +||.+.++.+    .+..+.
T Consensus       109 ~~~Rr~~~~~fs~~~l~~~~~~i~~~~~~ll~~l-~--~g~~d~~~~~~~~~~~~vi~~-l~G~~~~~~~----~~~~~~  180 (416)
T 3p3o_A          109 RRLRGLATHPFTPRRITAVQPFVRSTVEQLIDKL-P--QGDFDFVQHFPHPLPALVMCQ-LLGFPLEDYD----TVGRLS  180 (416)
T ss_dssp             HHHHHTTCGGGSHHHHHHHHHHHHHHHHHHHHTC-C--SSSEEHHHHTTTHHHHHHHHH-HHTCCGGGHH----HHHHHH
T ss_pred             HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhh-c--cCCccHHHHHHHHHHHHHHHH-HhCCCHHHHH----HHHHHH
Confidence            9999999999999999999999999999999999 3  3679977665 5699999998 5898654322    221111


Q ss_pred             HHHHHhhhhcccccccccccCcchhhhHHHHHHHHHHHHHHHHHHhhhhhcccccccCCcHHHHHHHhccccccccCCCH
Q 039293          229 YIVAKKKYKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKVVKKRESNVLTGEAESYGNDLLGILMRAYHSADETQKISL  308 (512)
Q Consensus       229 ~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~  308 (512)
                      ..+    .. .+.   ...+.....+..++.+.+.+++.+.+++++++        ...|+++.|+++..+   + .+++
T Consensus       181 ~~~----~~-~~~---~~~~~~~~~~~~~~~~~l~~~~~~~i~~rr~~--------~~~dll~~ll~~~~~---~-~ls~  240 (416)
T 3p3o_A          181 IET----NL-GLA---LSNDQDILVKVEQGLGRMFDYLVAAIEKRKVE--------PGDDLTSDIVRAFHD---G-VLDD  240 (416)
T ss_dssp             HTT----CG-GGT---TCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHHHHHHT---T-SSCH
T ss_pred             HHH----Hh-hcc---cccchhhHHHHHHHHHHHHHHHHHHHHHHHhC--------CCccHHHHHHHhhcc---C-CCCH
Confidence            111    11 011   00111224556777888899999999888765        457999999987543   2 7999


Q ss_pred             HHHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhCCCCCChhhhccchhHHHHHHhhhccCCCC-cc
Q 039293          309 DDLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARKEVLELLGQQNPSADNISRLKIVGMIINETLRLYPPF-VV  387 (512)
Q Consensus       309 ~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~-~~  387 (512)
                      +++.+++..+++||+|||+++++|++++|++||++|+|+++|++                 |+++||+|+||++|++ ..
T Consensus       241 ~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e~~-----------------~l~a~i~E~lRl~p~~~~~  303 (416)
T 3p3o_A          241 YELRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIKENPE-----------------LAPQAVEEVLRWSPTLPVT  303 (416)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG-----------------GHHHHHHHHHHHSCSCSSC
T ss_pred             HHHHHHHHHHHHhhccHHHHHHHHHHHHHHHCHHHHHHHHhCHH-----------------HHHHHHHHHHhhccccccC
Confidence            99999999999999999999999999999999999999999853                 7999999999999999 45


Q ss_pred             ccceeccccccCCeeeCCCCEEEEccchhccCCCCcCCCCCCCCCCCCCCCCCccccCCCccccccCCCcccccchHHHH
Q 039293          388 FVREVKKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGEDFHLYKPERFAQGVPKATSNNMAAFLPFGLGPRTCVGFNFTI  467 (512)
Q Consensus       388 ~~R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~  467 (512)
                      ++|.+.+|++++||.||||+.|+++.+++||||++| +||++|+|+||.+.          .++|||.|+|.|+|++||+
T Consensus       304 ~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~-~dp~~F~p~R~~~~----------~~l~FG~G~r~C~G~~lA~  372 (416)
T 3p3o_A          304 ATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVF-ADADRFDITVKREA----------PSIAFGGGPHFCLGTALAR  372 (416)
T ss_dssp             CEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTC-TTTTSCCTTCCCSS----------CCCTTCCSTTSCTTHHHHH
T ss_pred             cceEeCCCeEECCEEECCCCEEEEChHHhcCChhcc-CCccccCCCCCCCC----------CeecCCCCCccCcCHHHHH
Confidence            699999999999999999999999999999999999 99999999998431          5899999999999999999


Q ss_pred             HHHHHHHHHHHhhcE-EEeCCCCccCCCcceeeecCCCceEEEEe
Q 039293          468 IEAKIALSMILRRYK-FTLSPNYVHSPVPRITLCPQHGIQVMLRA  511 (512)
Q Consensus       468 ~~~~~~la~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  511 (512)
                      +|++++++.|+++|+ +++.++....+  +...+....++|++.|
T Consensus       373 ~e~~~~l~~ll~~f~~~~l~~~~~~~~--~~~~~g~~~lpv~~~p  415 (416)
T 3p3o_A          373 LELTEAVAALATRLDPPQIAGEITWRH--ELGVAGPDALPLRFGA  415 (416)
T ss_dssp             HHHHHHHHHHHHHSCCEEECSCCEECC--CTTCCCEEECEEEESC
T ss_pred             HHHHHHHHHHHHhCCccccCCCCceec--CCCccCcceeeEEEec
Confidence            999999999999995 88865432222  2233444567887754


No 73 
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A*
Probab=100.00  E-value=3.2e-56  Score=429.93  Aligned_cols=369  Identities=17%  Similarity=0.226  Sum_probs=292.8

Q ss_pred             CchHHHHHHHHHhCCeEEEecCCeeEEEecCHHHHHHHHhcCCCCCCCchhh-hHh--hhcCceeccCCchHHHHhhhhc
Q 039293           81 ITEPHIYSWIKLYGTNFLMWHGSQAELVVAEPKLIKEIMNNNRSFPKREPRE-YLK--LLGNGLVTTRGEKWLKKRKLAV  157 (512)
Q Consensus        81 ~~~~~~~~~~~kyG~vf~~~~~~~~~vvv~dpe~i~~i~~~~~~~~~~~~~~-~~~--~~g~~l~~~~g~~w~~~Rr~~~  157 (512)
                      +++.++.++.+ +|||+++..|   .+++++++.+++++.+. .|....... ...  ..+.+++..+|+.|+++|+++.
T Consensus        21 dp~~~~~~lr~-~~pv~~~~~g---~~~v~~~~~v~~~l~d~-~fs~~~~~~~~~~~~~~~~~l~~~dg~~h~~~R~~~~   95 (394)
T 2wiy_A           21 NPYPWYRRLQQ-DHPVHKLEDG---TYLVSRYADVSHFAKLP-IMSVEPGWADAGPWAVASDTALGSDPPHHTVLRRQTN   95 (394)
T ss_dssp             CCHHHHHHHHH-HCSEEECTTS---CEEECCHHHHHHHTTST-TEECHHHHHTCGGGGGGGGSGGGCCTTHHHHHHHHHH
T ss_pred             CccHHHHHHHh-cCCeEEecCC---eEEEcCHHHHHHHHcCC-CccccccccccccchhcccccccCCchHHHHHHHHHH
Confidence            45667777755 5899877653   68899999999999754 343322111 111  2356788889999999999999


Q ss_pred             CcCCHHHHhhhHHHHHHHHHHHHHHHHhhcCCcccHHHHHHHHhHhHhhhcccCccccccccHHHHHHHHHHHHHHhhhh
Q 039293          158 NAFHAENLKNMIPDMIASVDMMLERWRDYEGKEIDAYREIKVLTSEIISRTAFGSCYLEGENIFNMLTKMAYIVAKKKYK  237 (512)
Q Consensus       158 ~~~~~~~l~~~~~~i~~~~~~li~~l~~~~~~~vd~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (512)
                      +.|+...++.+.+.+++.++++++.|..  ++++|+...+..++.++++..+||.+.++.+.+.+   .+...+   ...
T Consensus        96 ~~fs~~~~~~~~~~i~~~~~~l~~~~~~--~~~~d~~~~~~~~~~~vi~~~~~G~~~~~~~~~~~---~~~~~~---~~~  167 (394)
T 2wiy_A           96 KWFTPKLVDGWVRTTRELVGDLLDGVEA--GQVIEARRDLAVVPTHVTMARVLQLPEDDADAVME---AMFEAM---LMQ  167 (394)
T ss_dssp             TTCSHHHHHHHTHHHHHHHHHHHHTCCT--TCCEEHHHHHTHHHHHHHHHHHHTCCCCCHHHHHH---HHHHHH---GGG
T ss_pred             hccCHHHHHHHHHHHHHHHHHHHHHHhc--cCCeeHHHHHHhhhHHHHHHHHcCCCHhHHHHHHH---HHHHHH---Hhc
Confidence            9999999999999999999999998863  36899999999999999999999987543222211   111111   111


Q ss_pred             cccccccccccCcchhhhHHHHHHHHHHHHHHHHHHhhhhhcccccccCCcHHHHHHHhccccccccCCCHHHHHHHHHH
Q 039293          238 LEIPGIGKLLKTNDDIESDKLEQDIRDSIIKVVKKRESNVLTGEAESYGNDLLGILMRAYHSADETQKISLDDLIDECKT  317 (512)
Q Consensus       238 ~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~  317 (512)
                      ...|..      ....+..++...+.+++.+.+++++.+        ...|+++.|++...+    ..++++|+.+++..
T Consensus       168 ~~~p~~------~~~~~~~~~~~~l~~~~~~~i~~rr~~--------~~~dll~~Ll~~~~~----~~ls~~el~~~~~~  229 (394)
T 2wiy_A          168 SAEPAD------GDVDRAAVAFGYLSARVAEMLEDKRVN--------PGDGLADSLLDAARA----GEITESEAIATILV  229 (394)
T ss_dssp             SSSCCT------THHHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHHHHHHT----TSSCHHHHHHHHHH
T ss_pred             cCCccc------hHHHHHHHHHHHHHHHHHHHHHHhhcC--------CCCcHHHHHHHhhhc----CCCCHHHHHHHHHH
Confidence            111211      112344556677888888888887654        346899999977532    35899999999999


Q ss_pred             HHHhchhhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhCCCCCChhhhccchhHHHHHHhhhccCCCCccccceeccccc
Q 039293          318 FYVAGTDTTASLLSWTIFLLAIHSDWQDKARKEVLELLGQQNPSADNISRLKIVGMIINETLRLYPPFVVFVREVKKEVK  397 (512)
Q Consensus       318 ~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~  397 (512)
                      +++||+|||+++++|++++|++||++|+++++|+                 .|++|||+|+||++||++..+|.+.+|++
T Consensus       230 l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e~-----------------~~l~a~i~E~LRl~pp~~~~~R~~~~d~~  292 (394)
T 2wiy_A          230 FYAVGHMAIGYLIASGIELFARRPEVFTAFRNDE-----------------SARAAIINEMVRMDPPQLSFLRFPTEDVE  292 (394)
T ss_dssp             HHHHTTTHHHHHHHHHHHHHHHCHHHHHHHHHCG-----------------GGHHHHHHHHHHHSCSBCEEEEEESSCEE
T ss_pred             HHHhhhhhHHHHHHHHHHHHHHCHHHHHHHHhCh-----------------HhHHHHHHHHHhhCCCccCeeEEECCCEE
Confidence            9999999999999999999999999999999974                 47899999999999999988999999999


Q ss_pred             cCCeeeCCCCEEEEccchhccCCCCcCCCCCCCCCCCCCCCCCccccCCCccccccCCCcccccchHHHHHHHHHHHHHH
Q 039293          398 LGDLIVPANVDVTIPVIAVHHDPQIWGEDFHLYKPERFAQGVPKATSNNMAAFLPFGLGPRTCVGFNFTIIEAKIALSMI  477 (512)
Q Consensus       398 ~~g~~IpkG~~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~la~l  477 (512)
                      ++||.||||+.|+++.+++||||++| +||++|+||||++.        . .++|||+|+|.|+|++||++|++++++.|
T Consensus       293 l~G~~Ip~G~~V~~~~~~~~rdp~~~-~dP~~F~p~R~~~~--------~-~~l~FG~G~r~C~G~~lA~~e~~~~l~~l  362 (394)
T 2wiy_A          293 IGGVLIEAGSPIRFMIGAANRDPEVF-DDPDVFDHTRPPAA--------S-RNLSFGLGPHSCAGQIISRAEATTVFAVL  362 (394)
T ss_dssp             ETTEEECTTCCEEEEHHHHTTCTTTS-SSTTSCCTTCCGGG--------S-CCSTTCCGGGSCTTHHHHHHHHHHHHHHH
T ss_pred             EcCeecCCCCEEEeChHhhcCCcccC-CCccccCCCCCCCC--------C-CccCCCCCCCcCCcHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999 99999999999742        1 58999999999999999999999999999


Q ss_pred             HhhcE-EEeCCCCccCCCcceeeecCCCceEEE
Q 039293          478 LRRYK-FTLSPNYVHSPVPRITLCPQHGIQVML  509 (512)
Q Consensus       478 l~~f~-~~~~~~~~~~~~~~~~~~~~~~~~v~~  509 (512)
                      +++|+ +++.++....  .+...+....++|++
T Consensus       363 l~~~~~~~l~~~~~~~--~~~~~~g~~~lpv~~  393 (394)
T 2wiy_A          363 AERYERIELAEEPTVA--HNDFARRYRKLPIVL  393 (394)
T ss_dssp             HHHCSCEEESSCCEEC--CCSSBCCEEECEEEE
T ss_pred             HHhCCCceECCCCccc--ccccccCcceeeEEe
Confidence            99998 9997643222  223345555677765


No 74 
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A*
Probab=100.00  E-value=3.1e-57  Score=429.13  Aligned_cols=319  Identities=18%  Similarity=0.226  Sum_probs=257.3

Q ss_pred             HHhCCeEEEecCCeeEEEecCHHHHHHHHhcCCCCCCCch-hhhHhhhcCceeccCCchHHHHhhhhcCcCCHHHHhhhH
Q 039293           91 KLYGTNFLMWHGSQAELVVAEPKLIKEIMNNNRSFPKREP-REYLKLLGNGLVTTRGEKWLKKRKLAVNAFHAENLKNMI  169 (512)
Q Consensus        91 ~kyG~vf~~~~~~~~~vvv~dpe~i~~i~~~~~~~~~~~~-~~~~~~~g~~l~~~~g~~w~~~Rr~~~~~~~~~~l~~~~  169 (512)
                      ++|||||++   |  .++++||+.+++++.++..|.+++. ..... .+.++++.+|+.|+++|+++++.|+..+++++.
T Consensus         2 r~~gpv~~~---g--~~vv~~~~~v~~vl~~~~~f~~~~~~~~~~~-~~~~l~~~~g~~~~~~R~~~~~~fs~~~l~~~~   75 (343)
T 2rfb_A            2 RLNDPVHYD---G--AWHVYKYSDVKHVLMNDKIFSSNPGNRYSNA-GGISFITMDNPEHKEFRDISAPYFLPSKINDYK   75 (343)
T ss_dssp             -CCCCEEET---T--EEEECSHHHHHHHHHCTTTEESSCSSCCC----CCGGGGCCHHHHHHHHHHHHHHHSHHHHGGGH
T ss_pred             CCcCCeeee---C--eEEEcCHHHHHHHHhChhhcccCCcCCCCCc-cccccccCCchHHHHHHHHhhhhcCHHHHHHHH
Confidence            579999875   3  8999999999999987656755431 11222 367788889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhcCCcccHHHHH-HHHhHhHhhhcccCccccccccHHHHHHHHHHHHHHhhhhccccccccccc
Q 039293          170 PDMIASVDMMLERWRDYEGKEIDAYREI-KVLTSEIISRTAFGSCYLEGENIFNMLTKMAYIVAKKKYKLEIPGIGKLLK  248 (512)
Q Consensus       170 ~~i~~~~~~li~~l~~~~~~~vd~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~  248 (512)
                      +.+.+.++++++.|.     ++|+..++ ..+++++++.+ ||.+.++.+.+.    .+...+..    ...|.+ .   
T Consensus        76 ~~i~~~~~~l~~~l~-----~~d~~~~~~~~~~~~vi~~~-~G~~~~~~~~~~----~~~~~~~~----~~~p~~-~---  137 (343)
T 2rfb_A           76 DFIEETSNDLIKNID-----NKDIISEYAVRLPVNIISKI-LGIPDSDMPLFK----LWSDYIIG----NKRDEN-F---  137 (343)
T ss_dssp             HHHHHHHHHHHTTCT-----TSCHHHHTTTHHHHHHHHHH-HTCCGGGHHHHH----HHHHHHHT----SCCSSH-H---
T ss_pred             HHHHHHHHHHHHhcc-----ccCHHHHHhhhhhHHHHHHH-cCCCHHHHHHHH----HHHHHHhh----ccCcch-h---
Confidence            999999999998885     68999876 89999999998 998765322222    22221111    111321 0   


Q ss_pred             CcchhhhHHHHHHHHHHHHHHHHHHhhhhhcccccccCCcHHHHHHHhccccccccCCCHHHHHHHHHHHHHhchhhhHH
Q 039293          249 TNDDIESDKLEQDIRDSIIKVVKKRESNVLTGEAESYGNDLLGILMRAYHSADETQKISLDDLIDECKTFYVAGTDTTAS  328 (512)
Q Consensus       249 ~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~  328 (512)
                        ..++. ++.+.+.+++.+.+               ..| ++.+++...+   +..++++++.+++.++++||+|||++
T Consensus       138 --~~~~~-~~~~~~~~~~~~~i---------------~~d-l~~ll~~~~~---~~~l~~~ei~~~~~~~~~AG~dTt~~  195 (343)
T 2rfb_A          138 --NYVNN-RMVSRLLEIFKSDS---------------HGI-INVLAGSSLK---NRKLTMDEKIKYIMLLIIGGNETTTN  195 (343)
T ss_dssp             --HHHHH-HHHHHHHHHHHSCC---------------SSH-HHHHHTCBCS---SSBCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             --hHHHH-HHHHHHHHHHHHHH---------------hcc-HHHHHhhhcC---CCCCCHHHHHHHHHHHHHHhhHHHHH
Confidence              01112 33333333332222               357 8888876432   34699999999999999999999999


Q ss_pred             HHHHHHHHHhhChHHHHHHHHHHHHHhCCCCCChhhhccchhHHHHHHhhhccCCCC-ccccceeccccccCCeeeCCCC
Q 039293          329 LLSWTIFLLAIHSDWQDKARKEVLELLGQQNPSADNISRLKIVGMIINETLRLYPPF-VVFVREVKKEVKLGDLIVPANV  407 (512)
Q Consensus       329 ~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~-~~~~R~~~~d~~~~g~~IpkG~  407 (512)
                      +++|++++|++||++|+|+++|+                    +|||+|+||++|++ +.++|.+.+|++++||.||||+
T Consensus       196 ~l~~~l~~L~~~P~~~~~l~~E~--------------------~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt  255 (343)
T 2rfb_A          196 LIGNMIRVIDENPDIIDDALKNR--------------------SGFVEETLRYYSPIQFLPHRFAAEDSYINNKKIKKGD  255 (343)
T ss_dssp             HHHHHHHHHHHCGGGHHHHHHCH--------------------HHHHHHHHHHSCSBCCBCCCEESSCEEETTEEECTTC
T ss_pred             HHHHHHHHHHhCHHHHHHHHcCc--------------------HHHHHHHHhhCcccccccceEECCCeEECCEEECCCC
Confidence            99999999999999999999984                    89999999999999 9779999999999999999999


Q ss_pred             EEEEccchhccCCCCcCCCCCCCCCCCCCCCCCccccCCCccccccCCCcccccchHHHHHHHHHHHHHHHhhcE-EEeC
Q 039293          408 DVTIPVIAVHHDPQIWGEDFHLYKPERFAQGVPKATSNNMAAFLPFGLGPRTCVGFNFTIIEAKIALSMILRRYK-FTLS  486 (512)
Q Consensus       408 ~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~la~ll~~f~-~~~~  486 (512)
                      .|+++.+++||||++| +||++|+|||+           . .++|||.|+|.|+|++||++|++++++.|+++|+ +++.
T Consensus       256 ~V~~~~~~~~rd~~~~-~dp~~F~PeR~-----------~-~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~  322 (343)
T 2rfb_A          256 QVIVYLGSANRDETFF-DEPDLFKIGRR-----------E-MHLAFGIGIHMCLGAPLARLEASIALNDILNHFKRIKID  322 (343)
T ss_dssp             EEEECHHHHTTCTTTS-SSTTSCCTTCS-----------S-CCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCSCCCBC
T ss_pred             EEEEChhhhCCCcccC-CCccccCCCCC-----------C-CCccCCCCCccCCChHHHHHHHHHHHHHHHHhCCCceeC
Confidence            9999999999999999 99999999994           1 5799999999999999999999999999999996 9997


Q ss_pred             CC
Q 039293          487 PN  488 (512)
Q Consensus       487 ~~  488 (512)
                      ++
T Consensus       323 ~~  324 (343)
T 2rfb_A          323 YK  324 (343)
T ss_dssp             TT
T ss_pred             CC
Confidence            63


No 75 
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A*
Probab=100.00  E-value=2.3e-53  Score=411.92  Aligned_cols=369  Identities=16%  Similarity=0.202  Sum_probs=274.6

Q ss_pred             cCchHHHHHHHHHhCCeEEEecCCeeEEEecCHHHHHHHHhcCCCCCCCch---hhhH---h-hhcCceeccCCchHHHH
Q 039293           80 PITEPHIYSWIKLYGTNFLMWHGSQAELVVAEPKLIKEIMNNNRSFPKREP---REYL---K-LLGNGLVTTRGEKWLKK  152 (512)
Q Consensus        80 ~~~~~~~~~~~~kyG~vf~~~~~~~~~vvv~dpe~i~~i~~~~~~~~~~~~---~~~~---~-~~g~~l~~~~g~~w~~~  152 (512)
                      .+++.++.++ +++|||++  .++....+|++++.+++++.+...|.....   ....   . ..+..++..||++|+++
T Consensus        34 ~dP~~~~~~l-R~~gPV~~--~~~~~~~~vt~~~~v~~vl~d~~~fs~~~~~~~~~~~~~~~~~~~~~~~~~Dg~~H~r~  110 (412)
T 4dnj_A           34 ADPYPEQETL-REAGPVVY--LDKWNVYGVARYAEVYAVLNDPLTFCSSRGVGLSDFKKEKPWRPPSLILEADPPAHTRT  110 (412)
T ss_dssp             HSCHHHHHHH-HHHCSSEE--ETTTTEEEECSHHHHHHHHTCTTTEESTTCSSSSCTTTSCCSSCCCTTTTCCTTHHHHH
T ss_pred             hCcHHHHHHH-HhcCCEEE--ECCCCEEEECCHHHHHHHHcCCccccCCCccccccccccccccCCCccccCChHHHHHH
Confidence            4567778777 45799964  455568999999999999987665532211   1111   1 12345677899999999


Q ss_pred             hhhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhcCCcccHHH-HHHHHhHhHhhhcccCccccccccHHHHHHHHHHHH
Q 039293          153 RKLAVNAFHAENLKNMIPDMIASVDMMLERWRDYEGKEIDAYR-EIKVLTSEIISRTAFGSCYLEGENIFNMLTKMAYIV  231 (512)
Q Consensus       153 Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~~~~vd~~~-~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~  231 (512)
                      |+++++.|+.+.++++++.|.+.++++++.+... ++++|+.. ....+..++++.+ +|....+.+........+    
T Consensus       111 R~~~~~~Fs~~~l~~~~~~i~~~~~~l~~~~~~~-~~~~D~v~~~~~~~~~~~i~~l-~g~~~~~~~~~~~~~~~~----  184 (412)
T 4dnj_A          111 RAVLSKVLSPATMKRLRDGFAAAADAKIDELLAR-GGNIDAIADLAEAYPLSVFPDA-MGLKQEGRENLLPYAGLV----  184 (412)
T ss_dssp             HHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT-TSEEETCCCCCCHHHHHHHHHH-HTCCSTTGGGHHHHHHHH----
T ss_pred             HhhcccccCHHHHHHhhHHHHHHHHHHHHhhhcc-CCCceeHHHHHhhhhHhHHHHH-cCCchhhhhhhhhhhhcc----
Confidence            9999999999999999999999999999998754 34677543 4456677777765 455444333333222211    


Q ss_pred             HHhhhhcccccccccccCcchhhhHHHHHHHHHHHHHHHHHHhhhhhcccccccCCcHHHHHHHhccccccccCCCHHHH
Q 039293          232 AKKKYKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKVVKKRESNVLTGEAESYGNDLLGILMRAYHSADETQKISLDDL  311 (512)
Q Consensus       232 ~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i  311 (512)
                      ...    ..+      .    ....+........+...+.++.+.      .....|.+..++....+   +..++++|+
T Consensus       185 ~~~----~~~------~----~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~~~~~---~~~l~~~e~  241 (412)
T 4dnj_A          185 FNA----FGP------P----NELRQSAIERSAPHQAYVAEQCQR------PNLAPGGFGACIHAFSD---TGEITPEEA  241 (412)
T ss_dssp             HHH----TSC------S----SHHHHHHHHTCHHHHHHHHHHTSG------GGSCTTSHHHHHHHTTT---TTSSCTTHH
T ss_pred             ccc----ccc------c----HHHHHHHHHHHHHHHHHHHHHHHh------hccccccchhhhHhhhh---ccchhHHHH
Confidence            110    000      0    001111111122222333333322      11234455555554433   457999999


Q ss_pred             HHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhCCCCCChhhhccchhHHHHHHhhhccCCCCccccce
Q 039293          312 IDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARKEVLELLGQQNPSADNISRLKIVGMIINETLRLYPPFVVFVRE  391 (512)
Q Consensus       312 ~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~  391 (512)
                      .+++..+++||+|||+++++|++++|++||++|+|+++|                 ..++.++++|++|++|+++.++|.
T Consensus       242 ~~~~~~l~~AG~eTTa~~l~~~~~~L~~~P~~~~~Lr~~-----------------~~~~~~~~eE~lR~~pp~~~~~R~  304 (412)
T 4dnj_A          242 PLLVRSLLSAGLDTTVNGIAAAVYCLARFPDEFARLRAD-----------------PSLARNAFEEAVRFESPVQTFFRT  304 (412)
T ss_dssp             HHHHHHHHHHSSHHHHHHHHHHHHHHHHCHHHHHHHHHC-----------------GGGHHHHHHHHHHHHCSBCEEEEE
T ss_pred             HHHHHHHHhccchhHHHHHHHHHHHHhhCHHHHHHHHhC-----------------ccccccccceeeeecCCccccccc
Confidence            999999999999999999999999999999999999985                 467899999999999999999999


Q ss_pred             eccccccCCeeeCCCCEEEEccchhccCCCCcCCCCCCCCCCCCCCCCCccccCCCccccccCCCcccccchHHHHHHHH
Q 039293          392 VKKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGEDFHLYKPERFAQGVPKATSNNMAAFLPFGLGPRTCVGFNFTIIEAK  471 (512)
Q Consensus       392 ~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~  471 (512)
                      +++|++++||.||||+.|+++.+++||||++| +||++|+||||..           .++|||+|+|.|+|++||++|++
T Consensus       305 a~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~f-~dP~~F~PeR~~~-----------~~lpFG~G~r~CiG~~lA~~E~~  372 (412)
T 4dnj_A          305 TTRDVELAGATIGEGEKVLMFLGSANRDPRRW-DDPDRYDITRKTS-----------GHVGFGSGVHMCVGQLVARLEGE  372 (412)
T ss_dssp             ESSCEEETTEEECTTCEEEEEHHHHTTCTTTS-SSTTSCCTTSCCT-----------TCCTTCCSTTSCTTHHHHHHHHH
T ss_pred             CCCCeEECCccCCCCCeEEeehhhccCChhhC-CCccccCCCCCCC-----------CCCCcCCCCcCChhHHHHHHHHH
Confidence            99999999999999999999999999999999 9999999999842           57999999999999999999999


Q ss_pred             HHHHHHHhhc-EEEeCCCCccCCCcceeeecCCCceEEEEe
Q 039293          472 IALSMILRRY-KFTLSPNYVHSPVPRITLCPQHGIQVMLRA  511 (512)
Q Consensus       472 ~~la~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  511 (512)
                      ++++.|+++| ++++.++...  ..+.++++..+++|+|+|
T Consensus       373 ~~l~~Ll~rf~~~~l~~~~~~--~~~~~~rg~~~LpV~~tP  411 (412)
T 4dnj_A          373 VVLAALARKVAAIEIAGPLKR--RFNNTLRGLESLPIQLTP  411 (412)
T ss_dssp             HHHHHHHHHEEEEEECSCCEE--EECSSBEEEEECEEEEEE
T ss_pred             HHHHHHHHHCCCCeECCCCee--ecCCCccCCcceeEEEEe
Confidence            9999999999 8998754332  223455677789999986


No 76 
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Probab=100.00  E-value=1.9e-49  Score=383.33  Aligned_cols=371  Identities=13%  Similarity=0.116  Sum_probs=277.4

Q ss_pred             cCchHHHHHHHHHhC-CeEEEecCCeeEEEecCHHHHHHHHhcCCCCCCCchhh---hHhhhcCceeccCCchHHHHhhh
Q 039293           80 PITEPHIYSWIKLYG-TNFLMWHGSQAELVVAEPKLIKEIMNNNRSFPKREPRE---YLKLLGNGLVTTRGEKWLKKRKL  155 (512)
Q Consensus        80 ~~~~~~~~~~~~kyG-~vf~~~~~~~~~vvv~dpe~i~~i~~~~~~~~~~~~~~---~~~~~g~~l~~~~g~~w~~~Rr~  155 (512)
                      .+++..+.++.+..+ +++..-.++- .-+|+.++.+++++.+...|+......   .....+..++..|+++|+++||+
T Consensus        37 ~~~~~~~~~lr~~~~~~~~~~~~~gg-~W~vtr~~dv~~vl~d~~~fs~~~~~~~~~~~~~~~~~~~~~D~p~H~r~Rrl  115 (417)
T 4dxy_A           37 DGYHEAWKKVQHPGIPDLIWTPFTGG-HWIATNGDTVKEVYSDPTRFSSEVIFLPKEAGEKAQMVPTKMDPPEHTPYRKA  115 (417)
T ss_dssp             GCHHHHHHHHSCTTCCSEEEESSTTS-EEEECSHHHHHHHHTCTTTEESSCCSSSTTSSCSSCTTTTTCCTTTHHHHHHH
T ss_pred             cChHHHHHHHHhhCCCCEEecCCCCC-EEEECCHHHHHHHHcCchhccCCCcccccccccccccCcccCCcHHHHHHHHH
Confidence            345666777755543 4655444433 678899999999998766665433211   11112234567799999999999


Q ss_pred             hcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhcCCcccHHHHHHH-HhHhHhhhcccCccccccccHHHHHHHHHHHHHHh
Q 039293          156 AVNAFHAENLKNMIPDMIASVDMMLERWRDYEGKEIDAYREIKV-LTSEIISRTAFGSCYLEGENIFNMLTKMAYIVAKK  234 (512)
Q Consensus       156 ~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~~~~vd~~~~~~~-~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~  234 (512)
                      +++.|+.+.++++++.|++.++++++.+.+.  +++|+...+.. +...+++ .++|....+.+    .+..+...+...
T Consensus       116 l~~~Fs~~~l~~~~~~i~~~~~~lld~l~~~--g~~D~v~~~a~~l~~~vi~-~llg~~~~d~~----~~~~~~~~~~~~  188 (417)
T 4dxy_A          116 LDKGLNLAKIRKVEDKVREVASSLIDSFAAR--GECDFAAEYAELFPVHVFM-ALADLPLEDIP----VLSEYARQMTRP  188 (417)
T ss_dssp             HHHHHCHHHHHTTHHHHHHHHHHHHHHHHTT--SEEEHHHHTTTTHHHHHHH-HHTTCCGGGHH----HHHHHHHHHHSC
T ss_pred             hhhhcCHHHHHHHHHHHHHHHHHHHHHhhhc--CCeeeHHHHHhhhHHHHHH-HHcCCCHHHHH----HHHhhhhhhccc
Confidence            9999999999999999999999999999754  68998777644 4455554 45787654322    222222221110


Q ss_pred             hhhcccccccccccCcchhhhHHHHHHHHHHHHHHHHHHhhhhhcccccccCCcHHHHHHHhccccccccCCCHHHHHHH
Q 039293          235 KYKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKVVKKRESNVLTGEAESYGNDLLGILMRAYHSADETQKISLDDLIDE  314 (512)
Q Consensus       235 ~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~  314 (512)
                           .    ...+........++...+.+++.+.++++++.        ...|+++.|+....+   +..++++++.++
T Consensus       189 -----~----~~~~~~~~~~~~~~~~~~~~~~~~li~~rr~~--------~~ddl~s~L~~~~~~---~~~~~~~e~~~~  248 (417)
T 4dxy_A          189 -----E----GNTPEEMATDLEAGNNGFYAYVDPIIRARVGG--------DGDDLITLMVNSEIN---GERIAHDKAQGL  248 (417)
T ss_dssp             -----C----CSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTC--------CCCSHHHHHHTCEET---TEECCHHHHHHH
T ss_pred             -----c----ccChHHHHHHHHHHHHHHHHHHHHHHHHHhcC--------Cccchhhhhcccccc---CCccchhHHHHH
Confidence                 0    11121223445566777888888888877754        457899998876543   467899999999


Q ss_pred             HHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHHHHHHHhCCCCCChhhhccchhHHHHHHhhhccCCCCccccceecc
Q 039293          315 CKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARKEVLELLGQQNPSADNISRLKIVGMIINETLRLYPPFVVFVREVKK  394 (512)
Q Consensus       315 ~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~  394 (512)
                      +..+++||+|||+++++|++++|++||++++++++|...+                  ....|.+|++++.+...|.+++
T Consensus       249 ~~~ll~AG~eTTa~~l~~~~~~L~~~P~~~~~l~~e~~~~------------------~~avee~~~~~~~~~~~R~a~~  310 (417)
T 4dxy_A          249 ISLLLLGGLDTVVNFLSFFMIHLARHPELVAELRSDPLKL------------------MRGAEEMFRRFPVVSEARMVAK  310 (417)
T ss_dssp             HHHHHHHTTHHHHHHHHHHHHHHHTCHHHHHHHHHCHHHH------------------HHTHHHHHHHSCCBEEEEEECS
T ss_pred             HHHHHhhcccchhhHHHHHHHHHHhCchhhhhhccCcccc------------------ccceeeeecccccccccccccc
Confidence            9999999999999999999999999999999999986543                  2233555555666667899999


Q ss_pred             ccccCCeeeCCCCEEEEccchhccCCCCcCCCCCCCCCCCCCCCCCccccCCCccccccCCCcccccchHHHHHHHHHHH
Q 039293          395 EVKLGDLIVPANVDVTIPVIAVHHDPQIWGEDFHLYKPERFAQGVPKATSNNMAAFLPFGLGPRTCVGFNFTIIEAKIAL  474 (512)
Q Consensus       395 d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l  474 (512)
                      |++++|+.||||+.|+++.+++||||++| +||++|+|||+-          . .++|||+|+|.|+|++||++|+++++
T Consensus       311 d~~l~G~~Ip~G~~V~~~~~a~~rDp~~f-~dP~~FdpeR~~----------~-~~l~FG~G~r~ClG~~LA~~E~~i~l  378 (417)
T 4dxy_A          311 DQEYKGVFLKRGDMILLPTALHGLDDAAN-PEPWKLDFSRRS----------I-SHSTFGGGPHRCAGMHLARMEVIVTL  378 (417)
T ss_dssp             CEEETTEEECTTCEEEEETHHHHTCTTTS-SSTTSCCTTCSC----------C-CCCTTCCGGGSCTTHHHHHHHHHHHH
T ss_pred             ceEecCccccCCCEEEEeehhhcCChhhC-CCccccCCCCCC----------C-CCCCcCCCcccCccHHHHHHHHHHHH
Confidence            99999999999999999999999999999 999999999941          2 67999999999999999999999999


Q ss_pred             HHHHhhc-EEEeCCCCccCCCcceeeecCCCceEEE
Q 039293          475 SMILRRY-KFTLSPNYVHSPVPRITLCPQHGIQVML  509 (512)
Q Consensus       475 a~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~v~~  509 (512)
                      +.||++| ++++.++..+.. .+.+.+....++|+|
T Consensus       379 ~~Ll~rfp~~~l~~~~~~~~-~~~~~~g~~~LPv~~  413 (417)
T 4dxy_A          379 EEWLKRIPEFSFKEGETPIY-HSGIVAAVENVPLVW  413 (417)
T ss_dssp             HHHHHHCSSCEECTTCCCEE-ECSSBCEEECCEEEC
T ss_pred             HHHHHhCCCceeCCCCCeee-cCCcccCceeeeEEe
Confidence            9999999 899976643322 222334445678876


No 77 
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00  E-value=1.8e-48  Score=367.73  Aligned_cols=333  Identities=14%  Similarity=0.112  Sum_probs=229.1

Q ss_pred             CCCC-CCCccCCCCHHHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCCeEEEecCCeeEEEecCHHHHHHHHh
Q 039293           42 GIKG-PSYKFFHGNNKEIINMKNEMIMSSSPMELSHQIFPITEPHIYSWIKLYGTNFLMWHGSQAELVVAEPKLIKEIMN  120 (512)
Q Consensus        42 ~~Pg-p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~vf~~~~~~~~~vvv~dpe~i~~i~~  120 (512)
                      .+|| ++++|++|+...+..               ..+..+++.++.+++++  +|+++.   .+.+++++++.+++++.
T Consensus        35 ~ppG~~~~~P~~G~~~~~~~---------------~~~~~dp~~~~~~lr~~--pV~~~~---~~~~vv~~~~~v~~vl~   94 (381)
T 2yjn_B           35 MIRGLHWGYGSNGDPYPMLL---------------CGHDDDPQRRYRSMRES--GVRRSR---TETWVVADHATARQVLD   94 (381)
T ss_dssp             HHHHHHHHHHHHTCHHHHHH---------------HTCCSCCHHHHHHHHHH--CEEECS---SSCEEECSHHHHHHHHH
T ss_pred             CCCcccccccccCCchhhcC---------------chhccCchHHHHHHHhC--CceeCC---CCEEEEcCHHHHHHHHc
Confidence            4567 447899998877643               11224567888888866  997655   34899999999999998


Q ss_pred             cCCCCCCCch-h--h-------hHhhhcCceeccCCchHHHHhhhhcCcCCHHHHhhhHHHHHHHHHHHHHHHHhhcCCc
Q 039293          121 NNRSFPKREP-R--E-------YLKLLGNGLVTTRGEKWLKKRKLAVNAFHAENLKNMIPDMIASVDMMLERWRDYEGKE  190 (512)
Q Consensus       121 ~~~~~~~~~~-~--~-------~~~~~g~~l~~~~g~~w~~~Rr~~~~~~~~~~l~~~~~~i~~~~~~li~~l~~~~~~~  190 (512)
                      +. .|.+... .  .       ... ++.++++.+|++|       .+.|+     + ++.|++.++++++.|.    ++
T Consensus        95 d~-~f~~~~~~~~~~~~~~~~~~~~-~~~~l~~~dg~~H-------~~~Ft-----~-~~~i~~~~~~ll~~~~----g~  155 (381)
T 2yjn_B           95 DP-AFTRATGRTPEWMRAAGAPPAE-WAQPFRDVHAASW-------EGEVP-----D-VGELAESFAGLLPGAG----AR  155 (381)
T ss_dssp             CS-SEESSCCCCCHHHHHHTCCHHH-HTHHHHHHHHCCC-------CSCCC-----C-CSCHHHHTSTTSCC--------
T ss_pred             CC-CcCCCcccccccccccccccch-hhhhhhhCCchhh-------hhccC-----C-hHHHHHHHHHHHHhcc----Cc
Confidence            74 4544321 0  1       112 2456777889999       56676     3 7888889999988886    47


Q ss_pred             ccHHHHH-HHHhHhHhhhcccCccccccccHHHHHHHHHHHHHHhhhhcccccccccccCcchhhhHHHHHHHHHHHHHH
Q 039293          191 IDAYREI-KVLTSEIISRTAFGSCYLEGENIFNMLTKMAYIVAKKKYKLEIPGIGKLLKTNDDIESDKLEQDIRDSIIKV  269 (512)
Q Consensus       191 vd~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~l~~~  269 (512)
                      +|+..++ ..++.++|+.+ ||.+.++.    +....+...+.       .+     +...   ...+..    +     
T Consensus       156 ~Dl~~~~a~~l~~~vi~~l-~G~~~~~~----~~~~~~~~~~~-------~~-----~~~~---~~~~~~----~-----  206 (381)
T 2yjn_B          156 LDLVGDFAWQVPVQGMTAV-LGAAGVLR----GAAWDARVSLD-------AQ-----LSPQ---QLAVTE----A-----  206 (381)
T ss_dssp             --CCCCCCTHHHHHHHHTC------CCH----HHHHHHTTHHH-------HT-----TSCC---CHHHHH----H-----
T ss_pred             chHHHHHHHHHHHHHHHHH-cCCCHHHH----HHHHHHHHhcc-------CC-----CCHH---HHHHHH----H-----
Confidence            8988765 69999999995 99876532    11111111000       00     0000   000000    0     


Q ss_pred             HHHHhhhhhcccccccCCcHHHHHHHhccccccccCCCHHHHHHHHHHHHHhchhhhHHHHHHHHHHHhhChHHHHHHHH
Q 039293          270 VKKRESNVLTGEAESYGNDLLGILMRAYHSADETQKISLDDLIDECKTFYVAGTDTTASLLSWTIFLLAIHSDWQDKARK  349 (512)
Q Consensus       270 i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~  349 (512)
                                         .++.+             .+    +++..+++||+|||+++++|++++|++||++++++++
T Consensus       207 -------------------~~~~l-------------~~----~~~~~ll~aG~eTt~~~l~~~l~~L~~~P~~~~~l~~  250 (381)
T 2yjn_B          207 -------------------AVAAL-------------PA----DPALRALFAGAEMTANTVVDAVLAVSAEPGLAERIAD  250 (381)
T ss_dssp             -------------------HHHHC-------------C------CHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred             -------------------HHHHH-------------HH----HHHHHHHHHhhhHHHHHHHHHHHHHHHCHHHHHHHhh
Confidence                               00000             00    6788999999999999999999999999999999999


Q ss_pred             HHHHHhCCCCCChhhhccchhHHHHHHhhhccCCCCccccceeccccccCCeeeCCCCEEEEccchhccCCCCcCCCCCC
Q 039293          350 EVLELLGQQNPSADNISRLKIVGMIINETLRLYPPFVVFVREVKKEVKLGDLIVPANVDVTIPVIAVHHDPQIWGEDFHL  429 (512)
Q Consensus       350 Ei~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~IpkG~~v~~~~~~~~~d~~~~~~~p~~  429 (512)
                      |+                 .|+++||+|+||++|+++..+|.+.+|++++|+.||||+.|+++.+++||||++| +||++
T Consensus       251 e~-----------------~~l~~~i~E~LR~~pp~~~~~R~a~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~~-~dp~~  312 (381)
T 2yjn_B          251 DP-----------------AAAQRTVAEVLRLHPALHLERRTATAEVRLGEHVIGEGEEVVVVVAAANRDPEVF-AEPDR  312 (381)
T ss_dssp             CC-----------------C--HHHHHHHHHHSCSCSEEEEEESSCEESSSCEECTTCEEEEEHHHHTTCTTTS-SSTTS
T ss_pred             CH-----------------HHHHHHhCeeeeecCCCcceeEEECCCeEECCEEECCCCEEEeCHHHHcCCcccC-CCccc
Confidence            84                 2899999999999999998899999999999999999999999999999999999 99999


Q ss_pred             CCCCCCCCCCCccccCCCccccccCCCcccccchHHHHHHHHHHHHHHHhhc-EEEeCCCCccCCCcceeeecCCCceEE
Q 039293          430 YKPERFAQGVPKATSNNMAAFLPFGLGPRTCVGFNFTIIEAKIALSMILRRY-KFTLSPNYVHSPVPRITLCPQHGIQVM  508 (512)
Q Consensus       430 F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~la~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~v~  508 (512)
                      |+|+||++         . .++|||+| |.|+|+++|++|++++++.|+++| ++++.++. ..+..+.+.++..+++|+
T Consensus       313 F~p~R~~~---------~-~~l~FG~G-h~C~G~~lA~~e~~~~l~~ll~~~p~~~l~~~~-~~~~~~~~~r~~~~LpV~  380 (381)
T 2yjn_B          313 LDVDRPDA---------D-RALSAHRG-HPGRLEELVTALATAALRAAAKALPGLTPSGPV-VRRRRSPVLRGTNRCPVE  380 (381)
T ss_dssp             CCSSCSCC---------C-CCCC-----CCSSHHHHHHHHHHHHHHHTTTTCCC-----CC-EECTTCSSSCCEEECCCC
T ss_pred             cCCCCCCC---------C-CccCCCCC-CCCchHHHHHHHHHHHHHHHHHhCCCcEECCCC-cccccCcccCCCccceee
Confidence            99999974         1 68999999 999999999999999999999999 99987553 222223344555556654


No 78 
>1m46_B IQ4, IQ4 motif from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle protein; 2.10A {Saccharomyces cerevisiae}
Probab=48.44  E-value=15  Score=17.68  Aligned_cols=12  Identities=42%  Similarity=0.556  Sum_probs=9.9

Q ss_pred             HHHHHHHHHHHH
Q 039293          342 DWQDKARKEVLE  353 (512)
Q Consensus       342 ~~~~~l~~Ei~~  353 (512)
                      ++|.++|+|+.+
T Consensus         8 nlqkkirkelkq   19 (26)
T 1m46_B            8 NLQKKIRKELKQ   19 (26)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            578999999865


No 79 
>2diu_A KIAA0430 protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=45.62  E-value=34  Score=24.23  Aligned_cols=35  Identities=11%  Similarity=0.091  Sum_probs=29.4

Q ss_pred             HHHHHHHHhC-CeEEEecCCeeEEEecCHHHHHHHHh
Q 039293           85 HIYSWIKLYG-TNFLMWHGSQAELVVAEPKLIKEIMN  120 (512)
Q Consensus        85 ~~~~~~~kyG-~vf~~~~~~~~~vvv~dpe~i~~i~~  120 (512)
                      .+.++..+|| +|..+ .+|.-+|...+.+.++..+.
T Consensus        29 ~L~~lF~~yGG~Vl~V-tgG~AfV~F~~~esA~~A~~   64 (96)
T 2diu_A           29 RLRRLSDNCGGKVLSI-TGCSAILRFINQDSAERAQK   64 (96)
T ss_dssp             HHHHHHHTTTCCEEEC-CTTCEEEEESSHHHHHHHHH
T ss_pred             HHHHHHHHcCCeeEEE-ecCEEEEEECCHHHHHHHHH
Confidence            4778999995 98777 56888999999999998875


No 80 
>1s79_A Lupus LA protein; RRM, alpha/beta, RNA binding protein, translation; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=29.20  E-value=1.4e+02  Score=21.06  Aligned_cols=40  Identities=13%  Similarity=0.153  Sum_probs=31.2

Q ss_pred             HHHHHHHHHhCCeEEEecC--------CeeEEEecCHHHHHHHHhcCC
Q 039293           84 PHIYSWIKLYGTNFLMWHG--------SQAELVVAEPKLIKEIMNNNR  123 (512)
Q Consensus        84 ~~~~~~~~kyG~vf~~~~~--------~~~~vvv~dpe~i~~i~~~~~  123 (512)
                      ..+.+...+||+|..+.+.        |.-+|...+++.++.++..++
T Consensus        26 ~~L~~~F~~~G~v~~v~i~~d~~g~~rG~aFV~F~~~e~a~~Ai~~~~   73 (103)
T 1s79_A           26 DDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVETPG   73 (103)
T ss_dssp             HHHHHHHHTSSCEEEEEEECCCTTSCCCEEEEEESSHHHHHHHHTSSC
T ss_pred             HHHHHHHhhcCCEEEEEEEECCCCCCccEEEEEECCHHHHHHHHHcCC
Confidence            4578888999998888763        334788899999999997544


No 81 
>2krb_A Eukaryotic translation initiation factor 3 subunit B; EIF3, eukaryotic initiation factor, EIF3B, EIF3J; NMR {Homo sapiens}
Probab=28.65  E-value=1.3e+02  Score=19.83  Aligned_cols=38  Identities=16%  Similarity=0.049  Sum_probs=30.2

Q ss_pred             HHHHHHHHHhCCeEEEecC-------CeeEEEecCHHHHHHHHhc
Q 039293           84 PHIYSWIKLYGTNFLMWHG-------SQAELVVAEPKLIKEIMNN  121 (512)
Q Consensus        84 ~~~~~~~~kyG~vf~~~~~-------~~~~vvv~dpe~i~~i~~~  121 (512)
                      ..+.+...+||+|-.+.+.       +.-+|-..+++.++..+..
T Consensus        22 ~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~Ai~~   66 (81)
T 2krb_A           22 NVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKN   66 (81)
T ss_dssp             HHHHHHHHTTCCEEEEECCCBTTBCCCEEEEEESSHHHHHHHHTT
T ss_pred             HHHHHHHhhcCCeEEEEecCCCCcEeEEEEEEECCHHHHHHHHHH
Confidence            4578888999999888765       3347888999999998863


No 82 
>1whv_A Poly(A)-specific ribonuclease; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, PARN, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2rok_A*
Probab=27.47  E-value=49  Score=23.49  Aligned_cols=37  Identities=16%  Similarity=0.444  Sum_probs=30.4

Q ss_pred             HHHHHHHHHhCCeEEEecCCe-eEEEecCHHHHHHHHh
Q 039293           84 PHIYSWIKLYGTNFLMWHGSQ-AELVVAEPKLIKEIMN  120 (512)
Q Consensus        84 ~~~~~~~~kyG~vf~~~~~~~-~~vvv~dpe~i~~i~~  120 (512)
                      .-+..+.+.||.|..-|+... -.+++.+++.++++++
T Consensus        30 ~DI~~lFs~fggv~I~WidDTsAlvvf~~~~~a~~al~   67 (100)
T 1whv_A           30 SDLYQLFSAFGNIQISWIDDTSAFVSLSQPEQVQIAVN   67 (100)
T ss_dssp             HHHHHHHTTTCSCCCEEEETTEEEEECSCHHHHHHHHH
T ss_pred             HHHHHHhhccCCEEEEEEcCCeEEEEecCHHHHHHHHH
Confidence            357888899998777787664 4888999999999987


No 83 
>2d9o_A DNAJ (HSP40) homolog, subfamily C, member 17; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.97  E-value=1.7e+02  Score=20.60  Aligned_cols=40  Identities=15%  Similarity=0.165  Sum_probs=31.6

Q ss_pred             hHHHHHHHHHhCCeEEEecC----CeeEEEecCHHHHHHHHhcC
Q 039293           83 EPHIYSWIKLYGTNFLMWHG----SQAELVVAEPKLIKEIMNNN  122 (512)
Q Consensus        83 ~~~~~~~~~kyG~vf~~~~~----~~~~vvv~dpe~i~~i~~~~  122 (512)
                      ...+.++..+||.|..+++.    +.-+|...+++.++..+...
T Consensus        31 e~~L~~~F~~~G~V~~v~i~~~~rGfaFVeF~~~~~A~~Ai~~~   74 (100)
T 2d9o_A           31 KDVLLRLLQKYGEVLNLVLSSKKPGTAVVEFATVKAAELAVQNE   74 (100)
T ss_dssp             HHHHHHHHHTTSCEEEEEEESSSSSEEEEEESCHHHHHHHHHTC
T ss_pred             HHHHHHHHHhcCCEEEEEEccCCCCEEEEEECCHHHHHHHHHhc
Confidence            45688899999999888874    23478889999999988763


No 84 
>1iqt_A AUF1, heterogeneous nuclear ribonucleoprotein D0; RNA-binding protein, hnRNP, telomere, DNA-binding protein, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wtb_A 1x0f_A
Probab=23.56  E-value=1.4e+02  Score=19.17  Aligned_cols=40  Identities=15%  Similarity=0.132  Sum_probs=30.5

Q ss_pred             HHHHHHHHHhCCeEEEecC---------CeeEEEecCHHHHHHHHhcCC
Q 039293           84 PHIYSWIKLYGTNFLMWHG---------SQAELVVAEPKLIKEIMNNNR  123 (512)
Q Consensus        84 ~~~~~~~~kyG~vf~~~~~---------~~~~vvv~dpe~i~~i~~~~~  123 (512)
                      ..+.+..++||+|..+.+.         +.-+|...+++.++.++....
T Consensus        14 ~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~Ai~~~~   62 (75)
T 1iqt_A           14 EKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKY   62 (75)
T ss_dssp             HHHHHHHHHHSCCSEECCCCSCCCSSSCCCEEEECSSSHHHHHHHTTSS
T ss_pred             HHHHHHHHhcCCeEEEEEEecCCCCCcCCEEEEEECCHHHHHHHHHhCC
Confidence            4578888999998888763         234678899999999987543


No 85 
>2dgx_A KIAA0430 protein; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=22.29  E-value=1.9e+02  Score=19.76  Aligned_cols=35  Identities=9%  Similarity=-0.115  Sum_probs=27.5

Q ss_pred             HHHHHHHhCCeEEEecC------CeeEEEecCHHHHHHHHh
Q 039293           86 IYSWIKLYGTNFLMWHG------SQAELVVAEPKLIKEIMN  120 (512)
Q Consensus        86 ~~~~~~kyG~vf~~~~~------~~~~vvv~dpe~i~~i~~  120 (512)
                      +.++.++||+|..+++.      +.-+|-..+++.++.++.
T Consensus        30 l~~~F~~~G~v~~v~i~~~~~~rg~afV~f~~~~~A~~Ai~   70 (96)
T 2dgx_A           30 LQEAFARHGKVKSVELSPHTDYQLKAVVQMENLQDAIGAVN   70 (96)
T ss_dssp             HHHHHHHHSCEEEEEECSCCSTTCCEEEEESSHHHHHHHHH
T ss_pred             HHHhccccCcEEEEEEEeCCCCCeEEEEEECCHHHHHHHHH
Confidence            33888999999888874      334788889999988875


No 86 
>3d2w_A TAR DNA-binding protein 43; DP-43 proteinopathy, TDP-43 inclusions, RNA recognition MOTI U, ALS, RRM; HET: DNA; 1.65A {Mus musculus}
Probab=22.21  E-value=1.5e+02  Score=20.08  Aligned_cols=35  Identities=14%  Similarity=0.221  Sum_probs=28.1

Q ss_pred             HHHHHHHHHhCCeEEEecC----CeeEEEecCHHHHHHH
Q 039293           84 PHIYSWIKLYGTNFLMWHG----SQAELVVAEPKLIKEI  118 (512)
Q Consensus        84 ~~~~~~~~kyG~vf~~~~~----~~~~vvv~dpe~i~~i  118 (512)
                      ..+.+..++||+|..+++.    |--+|...+++.++.+
T Consensus        26 ~~L~~~F~~~G~i~~v~i~~~srGfaFV~F~~~~~A~~~   64 (89)
T 3d2w_A           26 EELQQFFCQYGEVVDVFIPKPFRAFAFVTFADDKVAQSL   64 (89)
T ss_dssp             HHHHHHHTTTSCEEEEECCSSCCSEEEEEESCHHHHHHH
T ss_pred             HHHHHHHhccCCEEEEEEeeCCCCEEEEEECCHHHHHHH
Confidence            4688888999999888875    3457888999998854


No 87 
>1sjq_A Polypyrimidine tract-binding protein 1; babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=21.99  E-value=2.2e+02  Score=20.33  Aligned_cols=37  Identities=14%  Similarity=0.057  Sum_probs=29.5

Q ss_pred             HHHHHHHHHhCCeEEEecC---CeeEEEecCHHHHHHHHh
Q 039293           84 PHIYSWIKLYGTNFLMWHG---SQAELVVAEPKLIKEIMN  120 (512)
Q Consensus        84 ~~~~~~~~kyG~vf~~~~~---~~~~vvv~dpe~i~~i~~  120 (512)
                      .-+.++.++||.|-.+++.   +.-+|-..+.+.++....
T Consensus        31 ~dL~~lF~~fG~V~~v~i~~~kGfaFVeF~~~~~A~~Ai~   70 (105)
T 1sjq_A           31 GEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVN   70 (105)
T ss_dssp             HHHHHHHHHHCCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred             HHHHHHHHhcCCEEEEEEEcCCCEEEEEECCHHHHHHHHH
Confidence            4588899999998888764   345888899998888875


No 88 
>3v4m_A Splicing factor U2AF 65 kDa subunit; canonical RNA binding protein, RNA splicing, structural GENO joint center for structural genomics, JCSG; HET: MSE; 1.80A {Mus musculus} PDB: 1o0p_A 1opi_A
Probab=21.83  E-value=1.8e+02  Score=20.67  Aligned_cols=38  Identities=8%  Similarity=-0.111  Sum_probs=28.1

Q ss_pred             hHHHHHHHHHhCCeEEEecC-----------CeeEEEecCHHHHHHHHh
Q 039293           83 EPHIYSWIKLYGTNFLMWHG-----------SQAELVVAEPKLIKEIMN  120 (512)
Q Consensus        83 ~~~~~~~~~kyG~vf~~~~~-----------~~~~vvv~dpe~i~~i~~  120 (512)
                      ..-+.+...+||+|-.+.+.           |.-+|-..+++.++....
T Consensus        29 ~~dl~~~f~k~G~V~~v~i~~~~~~~~~~~~G~~fV~f~~~~~A~~Ai~   77 (105)
T 3v4m_A           29 VEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQ   77 (105)
T ss_dssp             HHHHHHHHHTTSCEEEEECCCCBTTBCCTTTTEEEEEESSHHHHHHHHH
T ss_pred             HHHHHHHHHccCCEEEEEEeccCCCCCcCCcEEEEEEECCHHHHHHHHH
Confidence            34577778899999888864           233677789988887764


No 89 
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=21.79  E-value=1.1e+02  Score=17.94  Aligned_cols=29  Identities=14%  Similarity=0.339  Sum_probs=18.1

Q ss_pred             hHHHHHHHHHHHHHhCCCCCChhhhccchhHHHHHHhhhcc
Q 039293          341 SDWQDKARKEVLELLGQQNPSADNISRLKIVGMIINETLRL  381 (512)
Q Consensus       341 p~~~~~l~~Ei~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl  381 (512)
                      .++.+.+|.|++.+            +-..++|+-.|--|-
T Consensus        14 qEIL~E~RkElqK~------------K~EIIeAi~~El~~~   42 (45)
T 1use_A           14 QELLEEVKKELQKV------------KEEIIEAFVQELRKR   42 (45)
T ss_dssp             HHHHHHHHHHHHHH------------HHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHH------------HHHHHHHHHHHHHhc
Confidence            46677777777665            334467777665543


No 90 
>3fgx_A Rbstp2171; structural genomics, PSI-2, Pro structure initiative, midwest center for structural genomic structural genomics; 2.90A {Bacillus stearothermophilus}
Probab=20.84  E-value=60  Score=23.67  Aligned_cols=17  Identities=12%  Similarity=0.151  Sum_probs=14.6

Q ss_pred             HHHHHHHHhCCeEEEec
Q 039293           85 HIYSWIKLYGTNFLMWH  101 (512)
Q Consensus        85 ~~~~~~~kyG~vf~~~~  101 (512)
                      ..+++.+|||.||++.+
T Consensus         9 ~~~~lk~kygk~y~v~~   25 (114)
T 3fgx_A            9 NTDELKQKYGRVYEIRI   25 (114)
T ss_dssp             CHHHHHHHHSSEEEEEE
T ss_pred             cHHHHHHHhCceEEEEe
Confidence            36788999999999987


No 91 
>1nu4_A U1A RNA binding domain; RNA recognition motif, U1 small nuclear ribonucleoprotein, R binding domain, RNA binding protein; HET: MLA; 1.80A {Homo sapiens} SCOP: d.58.7.1 PDB: 1drz_A* 1urn_A 3hhn_B* 3egz_A* 1zzn_A* 1u6b_A* 3cun_A* 3cul_A* 3g8s_A* 3g8t_A* 3g96_A* 3g9c_A* 3irw_P* 3mum_P* 3mur_P* 3mut_P* 3muv_P* 3mxh_P* 3p49_B 3r1h_A* ...
Probab=20.81  E-value=1.9e+02  Score=19.66  Aligned_cols=35  Identities=11%  Similarity=0.139  Sum_probs=27.8

Q ss_pred             HHHHHHHhCCeEEEecC------CeeEEEecCHHHHHHHHh
Q 039293           86 IYSWIKLYGTNFLMWHG------SQAELVVAEPKLIKEIMN  120 (512)
Q Consensus        86 ~~~~~~kyG~vf~~~~~------~~~~vvv~dpe~i~~i~~  120 (512)
                      +.+...+||+|-.+.+.      +.-+|-..+++.++..+.
T Consensus        29 l~~~f~~~G~i~~v~i~~~~~~~g~afV~f~~~~~A~~A~~   69 (97)
T 1nu4_A           29 LHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALR   69 (97)
T ss_dssp             HHHHHGGGSCEEEEECCHHHHHTTCEEEEESSHHHHHHHHH
T ss_pred             HHHHHHhCCCEEEEEEEcCCCcCcEEEEEeCCHHHHHHHHH
Confidence            44888999999888764      445788899999988875


No 92 
>1x5p_A Negative elongation factor E; structure genomics, RRM domain, PARP14, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=20.16  E-value=1.5e+02  Score=20.43  Aligned_cols=38  Identities=5%  Similarity=-0.016  Sum_probs=30.0

Q ss_pred             HHHHHHHHHhCCeEEEecC---CeeEEEecCHHHHHHHHhc
Q 039293           84 PHIYSWIKLYGTNFLMWHG---SQAELVVAEPKLIKEIMNN  121 (512)
Q Consensus        84 ~~~~~~~~kyG~vf~~~~~---~~~~vvv~dpe~i~~i~~~  121 (512)
                      ..+.++.++||+|..+.++   +.-+|...+++.++.++..
T Consensus        28 ~~l~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~a~~Ai~~   68 (97)
T 1x5p_A           28 TLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAE   68 (97)
T ss_dssp             HHHHHHHTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHHH
T ss_pred             HHHHHHHhhCCCEEEEEecCCCCEEEEEECCHHHHHHHHHH
Confidence            4688899999999888774   3447788899999988853


Done!