BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039294
(253 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3IDO|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase From
Entamoeba Histolytica With A Phosphotyrosine Crude Mimic
Hepes Molecule In The Active Site
pdb|3IDO|B Chain B, Crystal Structure Of Protein Tyrosine Phosphatase From
Entamoeba Histolytica With A Phosphotyrosine Crude Mimic
Hepes Molecule In The Active Site
pdb|3ILY|A Chain A, Apo Crystal Structure Of Protein Tyrosine Phosphatase From
Entamoeba Histolytica Featuring A Disordered Active Site
pdb|3ILY|B Chain B, Apo Crystal Structure Of Protein Tyrosine Phosphatase From
Entamoeba Histolytica Featuring A Disordered Active Site
pdb|3JS5|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase From
Entamoeba Histolytica With Hepes In The Active Site.
High Resolution, Alternative Crystal Form With 1
Molecule In Asymmetric Unit
Length = 178
Score = 167 bits (424), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 81/166 (48%), Positives = 108/166 (65%), Gaps = 11/166 (6%)
Query: 87 VLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRG 146
+LFVCLGNICRSPAAE V + +++ + K+ DSAGT YHEG ADSRMR K RG
Sbjct: 24 LLFVCLGNICRSPAAEAVMKKVIQNHHLTEKYICDSAGTCSYHEGQQADSRMRKVGKSRG 83
Query: 147 IEITSISRPIRPSDFKDFDLILAMDKQNRQDILEAFNRWKFREQLPEEAHKKVRLMCSYC 206
++ SISRP+ SDFK+FD I AMD N ++L ++ PE+ +K+ M +C
Sbjct: 84 YQVDSISRPVVSSDFKNFDYIFAMDNDNYYELL---------DRCPEQYKQKIFKMVDFC 134
Query: 207 KKHDETEVPDPYYGGPQGFEKVLDLLEDACESLLDSILAENNDIVN 252
TEVPDPYYGG +GF +V+D+LEDACE+L+ I E ++N
Sbjct: 135 TTIKTTEVPDPYYGGEKGFHRVIDILEDACENLI--IKLEEGKLIN 178
>pdb|3JVI|A Chain A, Product State Mimic Crystal Structure Of Protein Tyrosine
Phosphatase From Entamoeba Histolytica
Length = 161
Score = 167 bits (422), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 81/166 (48%), Positives = 108/166 (65%), Gaps = 11/166 (6%)
Query: 87 VLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRG 146
+LFVCLGNICRSPAAE V + +++ + K+ DSAGT YHEG ADSRMR K RG
Sbjct: 7 LLFVCLGNICRSPAAEAVMKKVIQNHHLTEKYICDSAGTCSYHEGQQADSRMRKVGKSRG 66
Query: 147 IEITSISRPIRPSDFKDFDLILAMDKQNRQDILEAFNRWKFREQLPEEAHKKVRLMCSYC 206
++ SISRP+ SDFK+FD I AMD N ++L ++ PE+ +K+ M +C
Sbjct: 67 YQVDSISRPVVSSDFKNFDYIFAMDNDNYYELL---------DRCPEQYKQKIFKMVDFC 117
Query: 207 KKHDETEVPDPYYGGPQGFEKVLDLLEDACESLLDSILAENNDIVN 252
TEVPDPYYGG +GF +V+D+LEDACE+L+ I E ++N
Sbjct: 118 TTIKTTEVPDPYYGGEKGFHRVIDILEDACENLI--IKLEEGKLIN 161
>pdb|2CWD|A Chain A, Crystal Structure Of Tt1001 Protein From Thermus
Thermophilus Hb8
pdb|2CWD|B Chain B, Crystal Structure Of Tt1001 Protein From Thermus
Thermophilus Hb8
pdb|2CWD|C Chain C, Crystal Structure Of Tt1001 Protein From Thermus
Thermophilus Hb8
pdb|2CWD|D Chain D, Crystal Structure Of Tt1001 Protein From Thermus
Thermophilus Hb8
Length = 161
Score = 121 bits (304), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 90/159 (56%), Gaps = 13/159 (8%)
Query: 83 KPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAAS 142
+P VLFVCLGNICRSP AEG+FR ++K+RG++ +F +DSAGT +H G P D R R
Sbjct: 3 RPVRVLFVCLGNICRSPMAEGIFRKLLKERGLEDRFEVDSAGTGAWHVGEPMDPRARRVL 62
Query: 143 KRRGIEITSISRPIRPSDFKDFDLILAMDKQNRQDILEAFNRWKFREQLPEEAHKKVRLM 202
+ G ++R + D +D IL MD++N +++L F EA KVRL+
Sbjct: 63 EEEGAYFPHVARRLTREDVLAYDHILVMDRENLEEVLRRFP----------EARGKVRLV 112
Query: 203 CSYCKKHDETEVPDPYYGGPQGFEKVLDLLEDACESLLD 241
EV DPYYG + F +V LE A ++ LD
Sbjct: 113 LEELGG---GEVQDPYYGDLEDFREVYWTLEAALQAFLD 148
>pdb|4ETM|A Chain A, Crystal Structure Of Yfkj From Bacillus Subtilis
pdb|4ETM|B Chain B, Crystal Structure Of Yfkj From Bacillus Subtilis
Length = 173
Score = 117 bits (293), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 87/163 (53%), Gaps = 12/163 (7%)
Query: 85 FSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKR 144
SVLFVCLGNICRSP AE +FRD+ K+G++ K DSAG +H GNP + +R
Sbjct: 19 ISVLFVCLGNICRSPMAEAIFRDLAAKKGLEGKIKADSAGIGGWHIGNPPHEGTQEILRR 78
Query: 145 RGIEITS-ISRPIRPSDFKDFDLILAMDKQNRQDILEAFNRWKFREQLPEEAHKKVRLMC 203
GI ++R + D DFD I+AMD +N + +H ++ +
Sbjct: 79 EGISFDGMLARQVSEQDLDDFDYIIAMDAEN-------IGSLRSMAGFKNTSH--IKRLL 129
Query: 204 SYCKKHDETEVPDPYYGGPQGFEKVLDLLEDACESLLDSILAE 246
Y + D +VPDPYY G FE+V L++ CE LL SI E
Sbjct: 130 DYVEDSDLADVPDPYYTGN--FEEVCQLIKTGCEQLLASIQKE 170
>pdb|5PNT|A Chain A, Crystal Structure Of A Human Low Molecular Weight
Phosphotyrosyl Phosphatase. Implications For Substrate
Specificity
pdb|3N8I|A Chain A, Crystal Structure Of The A Isoform Of Human Cytoplasmic
Protein Tyrosine Phosphatase (Hcptp-A) In Complex With
1-Naphtylacetic Acid
Length = 157
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 83/156 (53%), Gaps = 8/156 (5%)
Query: 86 SVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRR 145
SVLFVCLGNICRSP AE VFR +V + I + +DSA T Y GNP D R ++ KR
Sbjct: 7 SVLFVCLGNICRSPIAEAVFRKLVTDQNISENWRVDSAATSGYEIGNPPDYRGQSCMKRH 66
Query: 146 GIEITSISRPIRPSDFKDFDLILAMDKQNRQDILEAFNRWKFREQLPEEAHKKVRLMCSY 205
GI ++ ++R I DF FD IL MD+ N +D+ N+ K K+ L+ SY
Sbjct: 67 GIPMSHVARQITKEDFATFDYILCMDESNLRDLNRKSNQVK-------TCKAKIELLGSY 119
Query: 206 CKKHDETEVPDPYYGGPQGFEKVLDLLEDACESLLD 241
+ + DPYYG FE V C + L+
Sbjct: 120 -DPQKQLIIEDPYYGNDSDFETVYQQCVRCCRAFLE 154
>pdb|2P4U|A Chain A, Crystal Structure Of Acid Phosphatase 1 (Acp1) From Mus
Musculus
pdb|2P4U|B Chain B, Crystal Structure Of Acid Phosphatase 1 (Acp1) From Mus
Musculus
pdb|2P4U|C Chain C, Crystal Structure Of Acid Phosphatase 1 (Acp1) From Mus
Musculus
pdb|2P4U|D Chain D, Crystal Structure Of Acid Phosphatase 1 (Acp1) From Mus
Musculus
Length = 168
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 78/156 (50%), Gaps = 8/156 (5%)
Query: 86 SVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRR 145
SVLFVCLGNICRSP AE VFR +V + + IDS+ D++ G P D R + +
Sbjct: 10 SVLFVCLGNICRSPIAEAVFRKLVTDEKVSDNWAIDSSAVSDWNVGRPPDPRAVSCLRNH 69
Query: 146 GIEITSISRPIRPSDFKDFDLILAMDKQNRQDILEAFNRWKFREQLPEEAHKKVRLMCSY 205
GI +R I DF FD IL MD+ N +D+ N+ K K+ L+ SY
Sbjct: 70 GISTAHKARQITKEDFATFDYILCMDESNLRDLNRKSNQVK-------NCKAKIELLGSY 122
Query: 206 CKKHDETEVPDPYYGGPQGFEKVLDLLEDACESLLD 241
+ + DPYYG FE V C++ L+
Sbjct: 123 -DPQKQLIIEDPYYGNDSDFEVVYQQCLRCCKAFLE 157
>pdb|1XWW|A Chain A, Crystal Structure Of Human B-Form Low Molecular Weight
Phosphotyrosyl Phosphatase At 1.6 Angstrom Resolution
Length = 157
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 76/156 (48%), Gaps = 8/156 (5%)
Query: 86 SVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRR 145
SVLFVCLGNICRSP AE VFR +V + I + IDS D++ G D R + +
Sbjct: 7 SVLFVCLGNICRSPIAEAVFRKLVTDQNISENWVIDSGAVSDWNVGRSPDPRAVSCLRNH 66
Query: 146 GIEITSISRPIRPSDFKDFDLILAMDKQNRQDILEAFNRWKFREQLPEEAHKKVRLMCSY 205
GI +R I DF FD IL MD+ N +D+ N+ K K+ L+ SY
Sbjct: 67 GIHTAHKARQITKEDFATFDYILCMDESNLRDLNRKSNQVK-------TCKAKIELLGSY 119
Query: 206 CKKHDETEVPDPYYGGPQGFEKVLDLLEDACESLLD 241
+ + DPYYG FE V C + L+
Sbjct: 120 -DPQKQLIIEDPYYGNDSDFETVYQQCVRCCRAFLE 154
>pdb|1DG9|A Chain A, Crystal Structure Of Bovine Low Molecular Weight Ptpase
Complexed With Hepes
pdb|1Z12|A Chain A, Crystal Structure Of Bovine Low Molecular Weight Ptpase
Complexed With Vanadate
pdb|1Z13|A Chain A, Crystal Structure Of Bovine Low Molecular Weight Ptpase
Complexed With Molybdate
pdb|1PHR|A Chain A, The Crystal Structure Of A Low Molecular Phosphotyrosine
Protein Phosphatase
pdb|1PNT|A Chain A, Crystal Structure Of Bovine Heart Phosphotyrosyl
Phosphatase At 2.2 Angstroms Resolution
pdb|1BVH|A Chain A, Solution Structure Of A Low Molecular Weight Protein
Tyrosine Phosphatase
Length = 157
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 77/158 (48%), Gaps = 8/158 (5%)
Query: 86 SVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRR 145
SVLFVCLGNICRSP AE VFR +V + I + IDS D++ G D R + +
Sbjct: 7 SVLFVCLGNICRSPIAEAVFRKLVTDQNISDNWVIDSGAVSDWNVGRSPDPRAVSCLRNH 66
Query: 146 GIEITSISRPIRPSDFKDFDLILAMDKQNRQDILEAFNRWKFREQLPEEAHKKVRLMCSY 205
GI +R + DF FD IL MD+ N +D+ N+ K K+ L+ SY
Sbjct: 67 GINTAHKARQVTKEDFVTFDYILCMDESNLRDLNRKSNQVK-------NCRAKIELLGSY 119
Query: 206 CKKHDETEVPDPYYGGPQGFEKVLDLLEDACESLLDSI 243
+ + DPYYG FE V C + L+ +
Sbjct: 120 -DPQKQLIIEDPYYGNDADFETVYQQCVRCCRAFLEKV 156
>pdb|1C0E|A Chain A, Active Site S19a Mutant Of Bovine Heart Phosphotyrosyl
Phosphatase
pdb|1C0E|B Chain B, Active Site S19a Mutant Of Bovine Heart Phosphotyrosyl
Phosphatase
Length = 157
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 77/158 (48%), Gaps = 8/158 (5%)
Query: 86 SVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRR 145
SVLFVCLGNICR+P AE VFR +V + I + IDS D++ G D R + +
Sbjct: 7 SVLFVCLGNICRAPIAEAVFRKLVTDQNISDNWVIDSGAVSDWNVGRSPDPRAVSCLRNH 66
Query: 146 GIEITSISRPIRPSDFKDFDLILAMDKQNRQDILEAFNRWKFREQLPEEAHKKVRLMCSY 205
GI +R + DF FD IL MD+ N +D+ N+ K K+ L+ SY
Sbjct: 67 GINTAHKARQVTKEDFVTFDYILCMDESNLRDLNRKSNQVK-------NCRAKIELLGSY 119
Query: 206 CKKHDETEVPDPYYGGPQGFEKVLDLLEDACESLLDSI 243
+ + DPYYG FE V C + L+ +
Sbjct: 120 -DPQKQLIIEDPYYGNDADFETVYQQCVRCCRAFLEKV 156
>pdb|1D1P|A Chain A, Crystal Structure Of A Yeast Low Molecular Weight Protein
Tyrosine Phosphatase (Ltp1)
pdb|1D1P|B Chain B, Crystal Structure Of A Yeast Low Molecular Weight Protein
Tyrosine Phosphatase (Ltp1)
Length = 160
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 79/144 (54%), Gaps = 12/144 (8%)
Query: 86 SVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFN-IDSAGTIDYHEGNPADSRMRAASKR 144
SV F+CLGN CRSP AE +F+ V+K ++++FN IDS GT +YH G D R + K+
Sbjct: 8 SVAFICLGNFCRSPMAEAIFKHEVEKANLENRFNKIDSFGTSNYHVGESPDHRTVSICKQ 67
Query: 145 RGIEITSISRPIRPSDFKDFDLILAMDKQNRQDILEAFNRWKFREQLPEEAHKKVRLMCS 204
G++I + I+ F ++D I+ MD+ N ++ ++ PE + KV L
Sbjct: 68 HGVKINHKGKQIKTKHFDEYDYIIGMDESNINNL---------KKIQPEGSKAKVCLFGD 118
Query: 205 YCKKHD--ETEVPDPYYGGPQGFE 226
+ +T + DP+YG Q FE
Sbjct: 119 WNTNDGTVQTIIEDPWYGDIQDFE 142
>pdb|1D2A|A Chain A, Crystal Structure Of A Yeast Low Molecular Weight Protein
Tyrosine Phosphatase (Ltp1) Complexed With The Activator
Adenine
pdb|1D2A|B Chain B, Crystal Structure Of A Yeast Low Molecular Weight Protein
Tyrosine Phosphatase (Ltp1) Complexed With The Activator
Adenine
Length = 160
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 78/144 (54%), Gaps = 12/144 (8%)
Query: 86 SVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFN-IDSAGTIDYHEGNPADSRMRAASKR 144
SV F+ LGN CRSP AE +F+ V+K ++++FN IDS GT +YH G D R + K+
Sbjct: 8 SVAFIALGNFCRSPMAEAIFKHEVEKANLENRFNKIDSFGTSNYHVGESPDHRTVSICKQ 67
Query: 145 RGIEITSISRPIRPSDFKDFDLILAMDKQNRQDILEAFNRWKFREQLPEEAHKKVRLMCS 204
G++I + I+ F ++D I+ MD+ N ++ ++ PE + KV L
Sbjct: 68 HGVKINHKGKQIKTKHFDEYDYIIGMDESNINNL---------KKIQPEGSKAKVCLFGD 118
Query: 205 YCKKHD--ETEVPDPYYGGPQGFE 226
+ +T + DP+YG Q FE
Sbjct: 119 WNTNDGTVQTIIEDPWYGDIQDFE 142
>pdb|1D1Q|A Chain A, Crystal Structure Of A Yeast Low Molecular Weight Protein
Tyrosine Phosphatase (Ltp1) Complexed With The Substrate
Pnpp
pdb|1D1Q|B Chain B, Crystal Structure Of A Yeast Low Molecular Weight Protein
Tyrosine Phosphatase (Ltp1) Complexed With The Substrate
Pnpp
Length = 161
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 78/144 (54%), Gaps = 12/144 (8%)
Query: 86 SVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFN-IDSAGTIDYHEGNPADSRMRAASKR 144
SV F+ LGN CRSP AE +F+ V+K ++++FN IDS GT +YH G D R + K+
Sbjct: 9 SVAFIALGNFCRSPMAEAIFKHEVEKANLENRFNKIDSFGTSNYHVGESPDHRTVSICKQ 68
Query: 145 RGIEITSISRPIRPSDFKDFDLILAMDKQNRQDILEAFNRWKFREQLPEEAHKKVRLMCS 204
G++I + I+ F ++D I+ MD+ N ++ ++ PE + KV L
Sbjct: 69 HGVKINHKGKQIKTKHFDEYDYIIGMDESNINNL---------KKIQPEGSKAKVCLFGD 119
Query: 205 YCKKHD--ETEVPDPYYGGPQGFE 226
+ +T + DP+YG Q FE
Sbjct: 120 WNTNDGTVQTIIEDPWYGDIQDFE 143
>pdb|2GI4|A Chain A, Solution Structure Of The Low Molecular Weight Protein
Tyrosine Phosphatase From Campylobacter Jejuni
Length = 156
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 80/155 (51%), Gaps = 13/155 (8%)
Query: 87 VLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRG 146
+LF+CLGNICRSP AE + +D+VKK ++ +F I+SAGT H+G + +
Sbjct: 4 ILFICLGNICRSPMAEFIMKDLVKKANLEKEFFINSAGTSGEHDGEGMHYGTKNKLAQLN 63
Query: 147 IEITSI-SRPIRPSDFKDFDLILAMDKQNRQDILEAFNRWKFREQLPEEAHKKVRLMCSY 205
IE + S+ + + D ++ MD N +++L+ F KV + +
Sbjct: 64 IEHKNFTSKKLTQKLCDESDFLITMDNSNFKNVLKNFTN----------TQNKVLKITDF 113
Query: 206 CKKHDETEVPDPYYGGPQGFEKVLDLLEDACESLL 240
+ EVPDP+Y G F++ +L AC++LL
Sbjct: 114 SPSLNYDEVPDPWYSG--NFDETYKILSLACKNLL 146
>pdb|1P8A|A Chain A, Solution Structure Of The Low Molecular Weight Protein
Tyrosine Phosphatase From Tritrichomonas Foetus
Length = 146
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 74/147 (50%), Gaps = 24/147 (16%)
Query: 86 SVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRR 145
+VLFVCLGNICRSPA EG+ RD+V + I IDSA T +H G D+R + K
Sbjct: 6 AVLFVCLGNICRSPACEGICRDMVGDKLI-----IDSAATSGFHVGQSPDTRSQKVCKSN 60
Query: 146 GIEITSI-SRPIRPSDFKDFDLILAMDKQNRQDILEAFNRWKFREQLPEEAHKKVRLMCS 204
G++I+ +R I +DF FD+I A+D Q IL N K P KV L
Sbjct: 61 GVDISKQRARQITKADFSKFDVIAALD----QSILSDINSMK-----PSNCRAKVVLF-- 109
Query: 205 YCKKHDETEVPDPYY---GGPQGFEKV 228
+ V DPYY G P F +
Sbjct: 110 ----NPPNGVDDPYYSSDGFPTMFASI 132
>pdb|1U2P|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Low
Molecular Protein Tyrosine Phosphatase (Mptpa) At 1.9a
Resolution
pdb|1U2Q|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Low
Molecular Weight Protein Tyrosine Phosphatase (Mptpa) At
2.5a Resolution With Glycerol In The Active Site
Length = 163
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 84/172 (48%), Gaps = 17/172 (9%)
Query: 82 TKPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAA 141
+ P V FVC GNICRSP AE +F ++ RG+ + SAGT ++H G+ AD R
Sbjct: 2 SDPLHVTFVCTGNICRSPMAEKMFAQQLRHRGLGDAVRVTSAGTGNWHVGSCADERAAGV 61
Query: 142 SKRRGIEITSISRPIRPSDFKDFDLILAMDKQNRQDILEAFNRWKFREQLPEEAHKKVRL 201
+ G + + ++ DL++A+D+ N + QL EA +VR+
Sbjct: 62 LRAHGYPTDHRAAQV-GTEHLAADLLVALDR----------NHARLLRQLGVEA-ARVRM 109
Query: 202 MCSYCKKHD--ETEVPDPYYGGPQGFEKVLDLLEDACESLLDSI---LAENN 248
+ S+ + +V DPYYG FE+V ++E A L D + LA N
Sbjct: 110 LRSFDPRSGTHALDVEDPYYGDHSDFEEVFAVIESALPGLHDWVDERLARNG 161
>pdb|2LUO|A Chain A, Nmr Solution Structure Of Apo-Mptpa
Length = 164
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 84/172 (48%), Gaps = 17/172 (9%)
Query: 82 TKPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAA 141
+ P V FVC GNICRSP AE +F ++ RG+ + SAGT ++H G+ AD R
Sbjct: 3 SDPLHVTFVCTGNICRSPMAEKMFAQQLRHRGLGDAVRVTSAGTGNWHVGSCADERAAGV 62
Query: 142 SKRRGIEITSISRPIRPSDFKDFDLILAMDKQNRQDILEAFNRWKFREQLPEEAHKKVRL 201
+ G + + ++ DL++A+D+ N + QL EA +VR+
Sbjct: 63 LRAHGYPTDHRAAQV-GTEHLAADLLVALDR----------NHARLLRQLGVEA-ARVRM 110
Query: 202 MCSYCKKHD--ETEVPDPYYGGPQGFEKVLDLLEDACESLLDSI---LAENN 248
+ S+ + +V DPYYG FE+V ++E A L D + LA N
Sbjct: 111 LRSFDPRSGTHALDVEDPYYGDHSDFEEVFAVIESALPGLHDWVDERLARNG 162
>pdb|3ROF|A Chain A, Crystal Structure Of The S. Aureus Protein Tyrosine
Phosphatase Ptpa
Length = 158
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 80/163 (49%), Gaps = 17/163 (10%)
Query: 87 VLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRG 146
V FVCLGNICRSP AE + R +K R I + S GT ++ G P + +
Sbjct: 9 VAFVCLGNICRSPMAEAIMRQRLKDRNI-HDIKVHSRGTGSWNLGEPPHEGTQKILNKHN 67
Query: 147 IEITS-ISRPIRPSDFKDFDLILAMDKQNRQDILEAFNRWKFREQLPEEAHKKVRLMCSY 205
I IS +D DFD I+AMD+ N +I + P + +L+
Sbjct: 68 IPFDGMISELFEATD--DFDYIVAMDQSNVDNI---------KSINPNLKGQLFKLL--E 114
Query: 206 CKKHDETEVPDPYYGGPQGFEKVLDLLEDACESLLDSILAENN 248
+E++VPDPYY FE V D++ +C++L+D I+ + N
Sbjct: 115 FSNMEESDVPDPYY--TNNFEGVYDMVLSSCDNLIDYIVKDAN 155
>pdb|4ETI|A Chain A, Crystal Structure Of Ywle From Bacillus Subtilis
Length = 184
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 14/153 (9%)
Query: 87 VLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRG 146
++FVC GN CRSP AE +F+ I ++ G++ N+ SAG G + A ++
Sbjct: 37 IIFVCTGNTCRSPMAEALFKSIAEREGLN--VNVRSAGVFASPNGKATPHAVEALFEKH- 93
Query: 147 IEITSISRPIRPSDFKDFDLILAMDKQNRQDILEAFNRWKFREQLPEEAHKKVRLMCSYC 206
I + +S P+ + DL+LAM Q++Q I F R++ KV + Y
Sbjct: 94 IALNHVSSPLTEELMESADLVLAMTHQHKQIIASQFGRYR----------DKVFTLKEYV 143
Query: 207 KKHDETEVPDPYYGGPQGFEKVLDLLEDACESL 239
+V DP+ G +++ D LE+ L
Sbjct: 144 TG-SHGDVLDPFGGSIDIYKQTRDELEELLRQL 175
>pdb|1ZGG|A Chain A, Solution Structure Of A Low Molecular Weight Protein
Tyrosine Phosphatase From Bacillus Subtilis
Length = 150
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 14/153 (9%)
Query: 87 VLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRG 146
++FVC GN CRSP AE +F+ I ++ G++ N+ SAG G + A ++
Sbjct: 3 IIFVCTGNTCRSPMAEALFKSIAEREGLN--VNVRSAGVFASPNGKATPHAVEALFEKH- 59
Query: 147 IEITSISRPIRPSDFKDFDLILAMDKQNRQDILEAFNRWKFREQLPEEAHKKVRLMCSYC 206
I + +S P+ + DL+LAM Q++Q I F R++ KV + Y
Sbjct: 60 IALNHVSSPLTEELMESADLVLAMTHQHKQIIASQFGRYR----------DKVFTLKEYV 109
Query: 207 KKHDETEVPDPYYGGPQGFEKVLDLLEDACESL 239
+V DP+ G +++ D LE+ L
Sbjct: 110 TG-SHGDVLDPFGGSIDIYKQTRDELEELLRQL 141
>pdb|4ETN|A Chain A, Crystal Structure Of Ywle Mutant From Bacillus Subtilis
Length = 184
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 14/153 (9%)
Query: 87 VLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRG 146
++FVC GN RSP AE +F+ I ++ G++ N+ SAG G + A ++
Sbjct: 37 IIFVCTGNTSRSPMAEALFKSIAEREGLN--VNVRSAGVFASPNGKATPHAVEALFEKH- 93
Query: 147 IEITSISRPIRPSDFKDFDLILAMDKQNRQDILEAFNRWKFREQLPEEAHKKVRLMCSYC 206
I + +S P+ + DL+LAM Q++Q I F R++ KV + Y
Sbjct: 94 IALNHVSSPLTEELMESADLVLAMTHQHKQIIASQFGRYR----------DKVFTLKEYV 143
Query: 207 KKHDETEVPDPYYGGPQGFEKVLDLLEDACESL 239
+V DP+ G +++ D LE+ L
Sbjct: 144 TG-SHGDVLDPFGGSIDIYKQTRDELEELLRQL 175
>pdb|4EGS|A Chain A, Crystal Structure Analysis Of Low Molecular Weight Protein
Tyrosine Phosphatase From T. Tengcongensis
pdb|4EGS|B Chain B, Crystal Structure Analysis Of Low Molecular Weight Protein
Tyrosine Phosphatase From T. Tengcongensis
Length = 180
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 77/159 (48%), Gaps = 17/159 (10%)
Query: 87 VLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSR-MRAASKRR 145
VLFVC GN CRSP AEG+F K + + + SAG EG PA S + K
Sbjct: 37 VLFVCTGNTCRSPMAEGIFN--AKSKALGKDWEAKSAGVF-APEGFPASSEAVEVLKKEY 93
Query: 146 GIEITS-ISRPIRPSDFKDFDLILAMDKQNRQDILEAFNRWKFREQLPEEAHKKVRLMCS 204
GI+I+ ++ +R D K DL+LAM +++ ++ Q PE A K+ +
Sbjct: 94 GIDISDHRAKSLREEDLKGADLVLAMAFSHKRSLV---------SQYPEYAD-KIFTIKE 143
Query: 205 YCKKHDETEVPDPYYGGPQGFEKVLDLLEDACESLLDSI 243
+ E +V DPY + ++K + L + L++ +
Sbjct: 144 FVGL--EGDVEDPYGMPLEVYKKTAEELSGLIDKLIEKL 180
>pdb|2WMY|A Chain A, Crystal Structure Of The Tyrosine Phosphatase Wzb From
Escherichia Coli K30 In Complex With Sulphate.
pdb|2WMY|B Chain B, Crystal Structure Of The Tyrosine Phosphatase Wzb From
Escherichia Coli K30 In Complex With Sulphate.
pdb|2WMY|C Chain C, Crystal Structure Of The Tyrosine Phosphatase Wzb From
Escherichia Coli K30 In Complex With Sulphate.
pdb|2WMY|D Chain D, Crystal Structure Of The Tyrosine Phosphatase Wzb From
Escherichia Coli K30 In Complex With Sulphate.
pdb|2WMY|E Chain E, Crystal Structure Of The Tyrosine Phosphatase Wzb From
Escherichia Coli K30 In Complex With Sulphate.
pdb|2WMY|F Chain F, Crystal Structure Of The Tyrosine Phosphatase Wzb From
Escherichia Coli K30 In Complex With Sulphate.
pdb|2WMY|G Chain G, Crystal Structure Of The Tyrosine Phosphatase Wzb From
Escherichia Coli K30 In Complex With Sulphate.
pdb|2WMY|H Chain H, Crystal Structure Of The Tyrosine Phosphatase Wzb From
Escherichia Coli K30 In Complex With Sulphate
Length = 150
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 69/157 (43%), Gaps = 33/157 (21%)
Query: 86 SVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASK-- 143
S+L +C GNICRSP E + R ++ + I+SAG + +S +R A K
Sbjct: 10 SILVICTGNICRSPIGERLLRRLLPSK------KINSAGVGALVDHTADESAIRVAEKNG 63
Query: 144 -----RRGIEITSISRPIRPSDFKDFDLILAMDKQNRQDILEAFNRWKFREQLPEEAHKK 198
RG + TS + + +DL+L M+ + + I ++ EA K
Sbjct: 64 LCLKGHRGTKFTS-------ALARQYDLLLVMEYSHLEQI----------SRIAPEARGK 106
Query: 199 VRLMCSYCKKHDETEVPDPYYGGPQGFEKVLDLLEDA 235
L + D E+PDPY + F+ V LLE A
Sbjct: 107 TMLFGHWL---DSKEIPDPYRMSDEAFDSVYQLLEQA 140
>pdb|2WJA|A Chain A, Crystal Structure Of The Tyrosine Phosphatase Wzb From
Escherichia Coli K30 In Complex With Phosphate.
pdb|2WJA|B Chain B, Crystal Structure Of The Tyrosine Phosphatase Wzb From
Escherichia Coli K30 In Complex With Phosphate
Length = 168
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 69/157 (43%), Gaps = 33/157 (21%)
Query: 86 SVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASK-- 143
S+L +C GNICRSP E + R ++ + K N G + H + +S +R A K
Sbjct: 28 SILVICTGNICRSPIGERLLRRLLPSK----KINSAGVGALVDHAAD--ESAIRVAEKNG 81
Query: 144 -----RRGIEITSISRPIRPSDFKDFDLILAMDKQNRQDILEAFNRWKFREQLPEEAHKK 198
RG + TS + + +DL+L M+ + + I ++ EA K
Sbjct: 82 LCLKGHRGTKFTS-------ALARQYDLLLVMEYSHLEQI----------SRIAPEARGK 124
Query: 199 VRLMCSYCKKHDETEVPDPYYGGPQGFEKVLDLLEDA 235
L + D E+PDPY + F+ V LLE A
Sbjct: 125 TMLFGHWL---DSKEIPDPYRMSDEAFDSVYQLLEQA 158
>pdb|2FEK|A Chain A, Structure Of A Protein Tyrosine Phosphatase
Length = 167
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 21/163 (12%)
Query: 86 SVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRR 145
++L VC+GNICRSP AE + + + ++SAG + G AD + +
Sbjct: 24 NILVVCVGNICRSPTAERLLQR------YHPELKVESAG-LGALVGKGADPTAISVAAEH 76
Query: 146 GIEITS-ISRPIRPSDFKDFDLILAMDKQNRQDILEAFNRWKFREQLPEEAHKKVRLMCS 204
+ + +R I +++DLIL M+K++ + + E + E KV L
Sbjct: 77 QLSLEGHCARQISRRLCRNYDLILTMEKRHIERLCE----------MAPEMRGKVMLFGH 126
Query: 205 YCKKHDETEVPDPYYGGPQGFEKVLDLLEDACESLLDSILAEN 247
+ +E E+PDPY + F V LLE + ++ AE
Sbjct: 127 W---DNECEIPDPYRKSRETFAAVYTLLERSARQWAQALNAEQ 166
>pdb|2CD7|A Chain A, Staphylococcus Aureus Pi258 Arsenate Reductase (Arsc) H62q
Mutant
Length = 131
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 10/86 (11%)
Query: 86 SVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRR 145
++ F+C GN CRS AEG ++I+ + +N+ SAG I+ H NP + A K
Sbjct: 5 TIYFICTGNSCRSQMAEGWGKEILGE-----GWNVYSAG-IETHGVNP---KAIEAMKEV 55
Query: 146 GIEITSISRPIRPSD-FKDFDLILAM 170
I+I++ + + +D K DL++ +
Sbjct: 56 DIDISNQTSDLIDNDILKQSDLVVTL 81
>pdb|1LK0|A Chain A, Disulfide Intermediate Of C89l Arsenate Reductase From
Pi258
pdb|1LK0|B Chain B, Disulfide Intermediate Of C89l Arsenate Reductase From
Pi258
Length = 131
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 12/97 (12%)
Query: 86 SVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRR 145
++ F+C GN CRS AEG ++I+ + +N+ SAG I+ H NP + A K
Sbjct: 5 TIYFICTGNSCRSQMAEGWGKEILGE-----GWNVYSAG-IETHGVNP---KAIEAMKEV 55
Query: 146 GIEITSISRPIRPSD-FKDFDLILAM--DKQNRQDIL 179
I+I++ + + +D K DL++ + D N IL
Sbjct: 56 DIDISNHTSDLIDNDILKQSDLVVTLCSDADNNLPIL 92
>pdb|1LJL|A Chain A, Wild Type Pi258 S. Aureus Arsenate Reductase
Length = 131
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 10/86 (11%)
Query: 86 SVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRR 145
++ F+C GN CRS AEG ++I+ + +N+ SAG I+ H NP + A K
Sbjct: 5 TIYFICTGNSCRSQMAEGWGKEILGE-----GWNVYSAG-IETHGVNP---KAIEAMKEV 55
Query: 146 GIEITSISRPIRPSD-FKDFDLILAM 170
I+I++ + + +D K DL++ +
Sbjct: 56 DIDISNHTSDLIDNDILKQSDLVVTL 81
>pdb|1Y1L|A Chain A, Crystal Stracture Of Arsenate Reductase From Archaeoglobus
Fulgidus Dsm 4304, Structural Genomics
pdb|1Y1L|B Chain B, Crystal Stracture Of Arsenate Reductase From Archaeoglobus
Fulgidus Dsm 4304, Structural Genomics
pdb|1Y1L|C Chain C, Crystal Stracture Of Arsenate Reductase From Archaeoglobus
Fulgidus Dsm 4304, Structural Genomics
pdb|1Y1L|D Chain D, Crystal Stracture Of Arsenate Reductase From Archaeoglobus
Fulgidus Dsm 4304, Structural Genomics
Length = 124
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 87 VLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRG 146
VLFVC+ N RS AE +F + K + +SAG + D ++ RG
Sbjct: 2 VLFVCIHNTARSVMAEALFNAMAK------SWKAESAGV---EKAERVDETVKRLLAERG 52
Query: 147 IEITSISRPIRPSDFKDFDLILAMDKQNRQDIL---EAFNRW 185
++ R + + DFDLI+ + +++ +L + RW
Sbjct: 53 LKAKEKPRTVDEVNLDDFDLIVTVCEESSCVVLPTDKPVTRW 94
>pdb|1JL3|A Chain A, Crystal Structure Of B. Subtilis Arsc
pdb|1JL3|B Chain B, Crystal Structure Of B. Subtilis Arsc
pdb|1JL3|C Chain C, Crystal Structure Of B. Subtilis Arsc
pdb|1JL3|D Chain D, Crystal Structure Of B. Subtilis Arsc
pdb|1Z2D|A Chain A, Solution Structure Of Bacillus Subtilis Arsc In Reduced
State
pdb|1Z2E|A Chain A, Solution Structure Of Bacillus Subtilis Arsc In Oxidized
State
Length = 139
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 87 VLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRG 146
+ F+C GN CRS AEG K+ + ++ + SAG I+ H NP + A K G
Sbjct: 6 IYFLCTGNSCRSQMAEG-----WAKQYLGDEWKVYSAG-IEAHGLNPNAVK---AMKEVG 56
Query: 147 IEITSISRPIRPSD-FKDFDLILAM 170
I+I++ + I SD + DL++ +
Sbjct: 57 IDISNQTSDIIDSDILNNADLVVTL 81
>pdb|1JFV|A Chain A, X-Ray Structure Of Oxidised C10s, C15a Arsenate Reductase
From Pi258
Length = 131
Score = 31.6 bits (70), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 86 SVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRR 145
++ F+ GN RS AEG ++I+ + +N+ SAG I+ H NP + A K
Sbjct: 5 TIYFISTGNSARSQXAEGWGKEILGE-----GWNVYSAG-IETHGVNP---KAIEAXKEV 55
Query: 146 GIEITSISRPIRPSD-FKDFDLILAM 170
I+I++ + + +D K DL++ +
Sbjct: 56 DIDISNHTSDLIDNDILKQSDLVVTL 81
>pdb|1RXE|A Chain A, Arsc Complexed With Mnb
pdb|1RXI|A Chain A, Pi258 Arsenate Reductase (Arsc) Triple Mutant C10sC15AC82S
Length = 131
Score = 31.2 bits (69), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 86 SVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRR 145
++ F+ GN RS AEG ++I+ + +N+ SAG I+ H NP + A K
Sbjct: 5 TIYFISTGNSARSQMAEGWGKEILGE-----GWNVYSAG-IETHGVNP---KAIEAMKEV 55
Query: 146 GIEITSISRPIRPSD-FKDFDLILAM 170
I+I++ + + +D K DL++ +
Sbjct: 56 DIDISNHTSDLIDNDILKQSDLVVTL 81
>pdb|1WFR|A Chain A, Solution Structure Of The Conserved Hypothetical Protein
Tt1886, Possibly Sterol Carrier Protein, From Thermus
Thermophilus Hb8
Length = 143
Score = 30.8 bits (68), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 17/50 (34%)
Query: 204 SYCKKHDETEV-----------------PDPYYGGPQGFEKVLDLLEDAC 236
+YC+K +E+E PDP G P+G VLDL AC
Sbjct: 18 AYCRKLNESEAYRKAASTWEGSLALAVRPDPKAGFPKGVAVVLDLWHGAC 67
>pdb|1JF8|A Chain A, X-ray Structure Of Reduced C10s, C15a Arsenate Reductase
From Pi258
pdb|2FXI|A Chain A, Arsenate Reductase (Arsc From Pi258) C10sC15A DOUBLE
Mutant With Sulfate In Its Active Site
Length = 131
Score = 30.8 bits (68), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 86 SVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRR 145
++ F+ GN RS AEG ++I+ + +N+ SAG I+ H NP + A K
Sbjct: 5 TIYFISTGNSARSQMAEGWGKEILGE-----GWNVYSAG-IETHGVNP---KAIEAMKEV 55
Query: 146 GIEITSISRPIRPSD-FKDFDLILAM 170
I+I++ + + +D K DL++ +
Sbjct: 56 DIDISNHTSDLIDNDILKQSDLVVTL 81
>pdb|2CX7|A Chain A, Crystal Structure Of Sterol Carrier Protein 2
pdb|2CX7|B Chain B, Crystal Structure Of Sterol Carrier Protein 2
Length = 130
Score = 30.8 bits (68), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 17/50 (34%)
Query: 204 SYCKKHDETEV-----------------PDPYYGGPQGFEKVLDLLEDAC 236
+YC+K +E+E PDP G P+G VLDL AC
Sbjct: 11 AYCRKLNESEAYRKAASTWEGSLALAVRPDPKAGFPKGVAVVLDLWHGAC 60
>pdb|2L17|A Chain A, An Arsenate Reductase In The Reduced State
pdb|2L18|A Chain A, An Arsenate Reductase In The Phosphate Binding State
Length = 134
Score = 30.4 bits (67), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 18/89 (20%)
Query: 87 VLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMR----AAS 142
V+FVC N CRS AEG + + AG I SR+ A
Sbjct: 7 VMFVCKRNSCRSQMAEGFAKTL-------------GAGKIAVTSCGLESSRVHPTAIAMM 53
Query: 143 KRRGIEITS-ISRPIRPSDFKDFDLILAM 170
+ GI+I+ S PI + D+D+++++
Sbjct: 54 EEVGIDISGQTSDPIENFNADDYDVVISL 82
>pdb|1LJU|A Chain A, X-Ray Structure Of C15a Arsenate Reductase From Pi258
Complexed With Arsenite
Length = 131
Score = 30.4 bits (67), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 86 SVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRR 145
++ F+ GN RS AEG ++I+ + +N+ SAG I+ H NP + A K
Sbjct: 5 TIYFIXTGNSARSQMAEGWGKEILGE-----GWNVYSAG-IETHGVNP---KAIEAMKEV 55
Query: 146 GIEITSISRPIRPSD-FKDFDLILAM 170
I+I++ + + +D K DL++ +
Sbjct: 56 DIDISNHTSDLIDNDILKQSDLVVTL 81
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Query: 212 TEVPDPYYGGPQGFEKVL--DLLEDACESLLD 241
T +P+ YY G +G VL DLL + E LLD
Sbjct: 66 TGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLD 97
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 28.5 bits (62), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Query: 212 TEVPDPYYGGPQGFEKVL--DLLEDACESLLD 241
T +P+ YY G +G VL DLL + E LLD
Sbjct: 65 TGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLD 96
>pdb|3SK9|A Chain A, Crystal Structure Of The Thermus Thermophilus Cas3 Hd
Domain
pdb|3SKD|A Chain A, Crystal Structure Of The Thermus Thermophilus Cas3 Hd
Domain In The Presence Of Ni2+
Length = 265
Score = 27.7 bits (60), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 101 AEGVF-----RDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKR 144
A GVF R ++K++G+ + D A + H G PA++ ++ ++R
Sbjct: 109 AHGVFTELFLRRLLKEKGLPERAANDLAAALGAHHGFPANAEEKSRARR 157
>pdb|2WL8|A Chain A, X-Ray Crystal Structure Of Pex19p
pdb|2WL8|B Chain B, X-Ray Crystal Structure Of Pex19p
pdb|2WL8|C Chain C, X-Ray Crystal Structure Of Pex19p
pdb|2WL8|D Chain D, X-Ray Crystal Structure Of Pex19p
Length = 126
Score = 27.7 bits (60), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 6/64 (9%)
Query: 176 QDILEAFNRW--KFREQLPEEAHKKVR----LMCSYCKKHDETEVPDPYYGGPQGFEKVL 229
++I E + W RE LP E +K + +MC C++ + D FE VL
Sbjct: 36 KEITEKYPEWLQSHRESLPPEQFEKYQEQHSVMCKICEQFEAETPTDSETTQKARFEMVL 95
Query: 230 DLLE 233
DL++
Sbjct: 96 DLMQ 99
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,347,345
Number of Sequences: 62578
Number of extensions: 292822
Number of successful extensions: 730
Number of sequences better than 100.0: 42
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 667
Number of HSP's gapped (non-prelim): 42
length of query: 253
length of database: 14,973,337
effective HSP length: 97
effective length of query: 156
effective length of database: 8,903,271
effective search space: 1388910276
effective search space used: 1388910276
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.9 bits)