Query 039294
Match_columns 253
No_of_seqs 196 out of 1190
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 13:55:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039294.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039294hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3jvi_A Protein tyrosine phosph 100.0 2.2E-48 7.4E-53 325.7 14.1 155 83-246 3-157 (161)
2 4etm_A LMPTP, low molecular we 100.0 1.5E-48 5.2E-53 330.4 11.4 158 80-248 14-172 (173)
3 1d1q_A Tyrosine phosphatase (E 100.0 3.5E-46 1.2E-50 311.9 15.6 153 81-242 4-159 (161)
4 1u2p_A Ptpase, low molecular w 100.0 7.1E-46 2.4E-50 310.5 15.6 151 84-246 4-156 (163)
5 3n8i_A Low molecular weight ph 100.0 1.8E-46 6.3E-51 313.0 11.7 153 82-242 3-155 (157)
6 2gi4_A Possible phosphotyrosin 100.0 1.4E-46 4.8E-51 313.2 10.3 152 84-247 1-153 (156)
7 2cwd_A Low molecular weight ph 100.0 1.5E-45 5.2E-50 308.2 13.3 151 83-246 3-153 (161)
8 3rof_A Low molecular weight pr 100.0 3.1E-45 1.1E-49 306.0 13.6 148 83-246 5-153 (158)
9 4etn_A LMPTP, low molecular we 100.0 3.4E-45 1.2E-49 312.7 12.4 151 82-246 32-182 (184)
10 4egs_A Ribose 5-phosphate isom 100.0 7.9E-45 2.7E-49 309.3 12.7 149 80-243 30-180 (180)
11 2wmy_A WZB, putative acid phos 100.0 1.6E-42 5.5E-47 286.8 12.1 142 83-244 7-149 (150)
12 1p8a_A Protein tyrosine phosph 100.0 3.4E-43 1.1E-47 289.4 5.1 141 83-244 3-144 (146)
13 2fek_A Low molecular weight pr 100.0 9.1E-42 3.1E-46 287.3 12.5 143 83-245 21-164 (167)
14 2wja_A Putative acid phosphata 100.0 1.1E-41 3.8E-46 287.1 9.7 141 84-244 26-167 (168)
15 3rh0_A Arsenate reductase; oxi 100.0 8.5E-41 2.9E-45 276.4 8.3 131 80-241 16-147 (148)
16 2l17_A Synarsc, arsenate reduc 100.0 4.7E-40 1.6E-44 267.2 12.4 128 84-243 4-133 (134)
17 1jf8_A Arsenate reductase; ptp 100.0 1.5E-39 5E-44 263.4 8.0 127 84-241 3-130 (131)
18 1y1l_A Arsenate reductase (ARS 100.0 4.2E-39 1.4E-43 258.3 5.9 122 86-241 1-123 (124)
19 1jl3_A Arsenate reductase; alp 100.0 8.9E-38 3E-42 254.9 9.9 127 85-242 4-137 (139)
20 3t38_A Arsenate reductase; low 100.0 5.3E-38 1.8E-42 273.7 8.8 133 81-246 78-211 (213)
21 1tvm_A PTS system, galactitol- 95.3 0.099 3.4E-06 40.1 8.8 45 80-126 17-61 (113)
22 3czc_A RMPB; alpha/beta sandwi 94.1 0.065 2.2E-06 40.8 5.0 45 80-125 14-58 (110)
23 4h3k_B RNA polymerase II subun 94.1 0.053 1.8E-06 46.4 4.8 91 83-182 24-143 (214)
24 2m1z_A LMO0427 protein; homolo 93.3 0.086 2.9E-06 40.5 4.3 65 84-174 2-68 (106)
25 2kyr_A Fructose-like phosphotr 90.8 0.25 8.6E-06 38.2 4.3 65 84-174 5-71 (111)
26 1vkr_A Mannitol-specific PTS s 90.5 0.37 1.3E-05 37.6 5.1 34 81-114 10-43 (125)
27 1e2b_A Enzyme IIB-cellobiose; 89.3 0.54 1.9E-05 35.5 5.0 41 83-126 2-42 (106)
28 3p9y_A CG14216, LD40846P; phos 88.8 0.51 1.7E-05 39.9 4.9 92 82-182 7-127 (198)
29 2r48_A Phosphotransferase syst 88.5 0.46 1.6E-05 36.4 4.1 64 85-174 3-68 (106)
30 3eag_A UDP-N-acetylmuramate:L- 84.0 2.1 7.3E-05 38.0 6.7 70 82-170 2-73 (326)
31 2l2q_A PTS system, cellobiose- 83.2 1.1 3.8E-05 33.7 3.9 39 85-126 5-43 (109)
32 2r4q_A Phosphotransferase syst 76.0 2.2 7.7E-05 32.5 3.5 64 85-174 3-68 (106)
33 3nbm_A PTS system, lactose-spe 70.7 6.6 0.00023 29.7 5.0 41 81-124 3-43 (108)
34 3sqn_A Conserved domain protei 69.8 8.6 0.0003 36.3 6.7 60 80-172 394-453 (485)
35 2jtq_A Phage shock protein E; 69.1 7 0.00024 27.1 4.6 39 84-129 41-79 (85)
36 3obb_A Probable 3-hydroxyisobu 67.2 5.9 0.0002 35.0 4.7 68 83-173 2-69 (300)
37 3auf_A Glycinamide ribonucleot 66.5 8.7 0.0003 32.8 5.5 91 80-182 18-122 (229)
38 3f4a_A Uncharacterized protein 65.9 1.1 3.7E-05 36.4 -0.4 44 85-128 105-149 (169)
39 3dfz_A SIRC, precorrin-2 dehyd 64.9 18 0.00062 30.6 7.2 73 83-174 30-102 (223)
40 2ywr_A Phosphoribosylglycinami 64.1 13 0.00046 31.1 6.2 79 84-174 1-91 (216)
41 2auv_A Potential NAD-reducing 63.6 2.2 7.4E-05 30.4 0.9 28 85-112 6-33 (85)
42 1cfz_A Hydrogenase 2 maturatio 62.2 7.4 0.00025 31.2 4.0 43 85-127 1-45 (162)
43 1wv9_A Rhodanese homolog TT165 62.1 11 0.00038 26.6 4.6 38 85-129 54-91 (94)
44 1qv9_A F420-dependent methylen 60.3 4.6 0.00016 35.4 2.5 51 83-142 2-52 (283)
45 3hn7_A UDP-N-acetylmuramate-L- 60.1 17 0.00057 34.5 6.7 68 82-169 17-86 (524)
46 1m2d_A [2Fe-2S] ferredoxin; th 56.0 10 0.00034 28.3 3.6 43 85-127 3-57 (110)
47 4hv4_A UDP-N-acetylmuramate--L 55.8 30 0.001 32.4 7.6 66 83-170 21-88 (494)
48 2k0z_A Uncharacterized protein 55.5 16 0.00053 26.7 4.5 39 84-129 56-94 (110)
49 3foj_A Uncharacterized protein 54.6 7.5 0.00026 27.9 2.6 39 84-129 56-94 (100)
50 1qxn_A SUD, sulfide dehydrogen 54.0 5.2 0.00018 30.8 1.7 39 84-128 82-120 (137)
51 3nhv_A BH2092 protein; alpha-b 53.5 6.3 0.00021 30.7 2.1 40 83-128 71-111 (144)
52 3eme_A Rhodanese-like domain p 50.0 10 0.00034 27.3 2.6 39 84-129 56-94 (103)
53 2j6p_A SB(V)-AS(V) reductase; 50.0 12 0.00042 29.1 3.3 44 85-128 69-113 (152)
54 1tq1_A AT5G66040, senescence-a 49.9 11 0.00037 28.4 3.0 39 84-128 82-120 (129)
55 3rc1_A Sugar 3-ketoreductase; 49.9 22 0.00075 31.5 5.4 75 80-173 23-99 (350)
56 1p3d_A UDP-N-acetylmuramate--a 49.3 49 0.0017 30.6 7.9 66 83-170 17-84 (475)
57 1t70_A Phosphatase; crystal, X 47.4 66 0.0023 27.7 7.9 57 85-148 1-59 (255)
58 2fsx_A RV0390, COG0607: rhodan 46.9 14 0.00049 28.4 3.3 40 84-129 80-119 (148)
59 4gbj_A 6-phosphogluconate dehy 46.9 14 0.00048 32.3 3.5 66 85-173 6-71 (297)
60 2hhg_A Hypothetical protein RP 46.4 8.1 0.00028 29.3 1.7 39 84-128 86-124 (139)
61 4e5v_A Putative THUA-like prot 45.9 81 0.0028 27.4 8.3 40 82-124 2-41 (281)
62 3uuw_A Putative oxidoreductase 45.0 42 0.0014 28.8 6.3 73 82-174 4-77 (308)
63 2f00_A UDP-N-acetylmuramate--L 43.9 57 0.002 30.3 7.5 66 83-170 18-85 (491)
64 1gmx_A GLPE protein; transfera 43.6 10 0.00035 27.5 1.8 38 85-128 59-96 (108)
65 2z06_A Putative uncharacterize 42.2 90 0.0031 26.9 7.9 57 85-148 1-59 (252)
66 4dll_A 2-hydroxy-3-oxopropiona 41.9 32 0.0011 30.0 5.1 69 82-173 29-97 (320)
67 3e9m_A Oxidoreductase, GFO/IDH 41.4 1.5E+02 0.0051 25.6 9.5 74 83-174 4-78 (330)
68 3g5j_A Putative ATP/GTP bindin 40.1 14 0.00048 27.3 2.1 38 85-128 90-127 (134)
69 1fmt_A Methionyl-tRNA FMet for 39.7 58 0.002 28.8 6.5 91 83-181 2-101 (314)
70 3c24_A Putative oxidoreductase 37.9 72 0.0025 26.9 6.7 67 84-174 11-78 (286)
71 1t71_A Phosphatase, conserved 37.0 68 0.0023 28.1 6.4 61 83-148 3-65 (281)
72 3lk7_A UDP-N-acetylmuramoylala 36.1 48 0.0017 30.4 5.6 69 83-170 8-79 (451)
73 3ec7_A Putative dehydrogenase; 35.1 50 0.0017 29.1 5.3 78 80-174 19-98 (357)
74 3v5n_A Oxidoreductase; structu 34.9 92 0.0031 28.1 7.2 80 82-173 35-120 (417)
75 3g0o_A 3-hydroxyisobutyrate de 34.7 89 0.003 26.7 6.8 69 83-173 6-74 (303)
76 3iwh_A Rhodanese-like domain p 34.4 32 0.0011 25.0 3.3 39 84-129 56-94 (103)
77 2h78_A Hibadh, 3-hydroxyisobut 34.0 62 0.0021 27.5 5.6 67 83-172 2-68 (302)
78 2efe_B Small GTP-binding prote 33.7 24 0.00083 26.8 2.7 35 74-108 2-36 (181)
79 3e18_A Oxidoreductase; dehydro 33.1 1.3E+02 0.0044 26.5 7.7 71 83-173 4-75 (359)
80 1rcu_A Conserved hypothetical 33.1 57 0.002 27.0 5.0 54 82-146 21-81 (195)
81 3d1p_A Putative thiosulfate su 33.1 12 0.0004 28.4 0.6 40 83-128 90-129 (139)
82 1vee_A Proline-rich protein fa 32.7 40 0.0014 25.4 3.7 36 84-125 74-109 (134)
83 1weh_A Conserved hypothetical 31.3 68 0.0023 25.7 5.1 51 85-146 2-56 (171)
84 3a11_A Translation initiation 31.1 42 0.0014 30.2 4.1 79 83-173 141-219 (338)
85 3gk5_A Uncharacterized rhodane 30.8 23 0.0008 25.7 2.0 38 84-128 55-92 (108)
86 3ilm_A ALR3790 protein; rhodan 30.3 14 0.0005 28.4 0.8 38 85-128 57-94 (141)
87 2e85_A Hydrogenase 3 maturatio 30.3 60 0.0021 25.7 4.5 41 85-127 4-46 (159)
88 2xxa_A Signal recognition part 30.0 1.1E+02 0.0039 28.1 7.0 41 83-125 99-139 (433)
89 3hix_A ALR3790 protein; rhodan 29.6 13 0.00043 27.0 0.3 38 85-128 53-90 (106)
90 3q0i_A Methionyl-tRNA formyltr 29.2 96 0.0033 27.5 6.1 84 83-174 6-96 (318)
91 1h6d_A Precursor form of gluco 29.2 2.3E+02 0.008 25.6 9.0 76 80-174 79-161 (433)
92 3op3_A M-phase inducer phospha 28.3 27 0.00093 29.3 2.2 45 84-129 124-174 (216)
93 3i9v_2 NADH-quinone oxidoreduc 28.1 73 0.0025 26.0 4.8 43 84-126 76-125 (181)
94 1ydh_A AT5G11950; structural g 28.1 79 0.0027 26.5 5.1 55 82-146 7-65 (216)
95 3hzu_A Thiosulfate sulfurtrans 28.0 21 0.00072 31.4 1.5 41 83-128 110-150 (318)
96 1z82_A Glycerol-3-phosphate de 27.0 1.4E+02 0.0049 25.7 6.9 72 83-173 13-90 (335)
97 4f67_A UPF0176 protein LPG2838 26.4 26 0.00089 30.5 1.8 40 83-128 180-219 (265)
98 1t3k_A Arath CDC25, dual-speci 26.1 37 0.0013 26.4 2.5 45 83-128 84-132 (152)
99 1c25_A CDC25A; hydrolase, cell 25.1 34 0.0012 26.4 2.1 40 88-128 93-138 (161)
100 3ggo_A Prephenate dehydrogenas 25.0 1.4E+02 0.0048 25.9 6.4 73 83-174 32-105 (314)
101 3tqq_A Methionyl-tRNA formyltr 24.7 1.1E+02 0.0038 27.0 5.7 84 83-174 1-91 (314)
102 1xea_A Oxidoreductase, GFO/IDH 24.6 2.2E+02 0.0075 24.3 7.6 70 84-174 2-74 (323)
103 3pu6_A Uncharacterized protein 24.1 48 0.0016 26.3 2.8 49 85-148 3-57 (157)
104 3i2v_A Adenylyltransferase and 23.4 80 0.0027 22.8 3.8 43 85-129 73-117 (127)
105 3ipz_A Monothiol glutaredoxin- 23.1 86 0.0029 22.6 4.0 47 98-149 4-50 (109)
106 4ekn_B Aspartate carbamoyltran 23.0 2.5E+02 0.0084 24.8 7.6 73 81-170 148-225 (306)
107 3rfo_A Methionyl-tRNA formyltr 22.8 1.2E+02 0.0042 26.8 5.6 85 82-174 2-93 (317)
108 1e0c_A Rhodanese, sulfurtransf 22.7 37 0.0013 28.5 2.0 41 83-128 80-120 (271)
109 2eq7_C 2-oxoglutarate dehydrog 22.1 64 0.0022 19.2 2.5 17 134-150 2-18 (40)
110 3euw_A MYO-inositol dehydrogen 22.1 2.1E+02 0.0072 24.6 7.0 72 83-174 3-76 (344)
111 4gqa_A NAD binding oxidoreduct 21.9 2.5E+02 0.0086 24.8 7.6 80 84-174 26-107 (412)
112 3zyw_A Glutaredoxin-3; metal b 21.7 83 0.0028 23.0 3.6 43 102-149 6-48 (111)
113 1jx7_A Hypothetical protein YC 21.7 1.9E+02 0.0065 20.5 5.6 77 84-160 1-91 (117)
114 3mz0_A Inositol 2-dehydrogenas 20.8 1.6E+02 0.0053 25.5 5.8 74 84-174 2-77 (344)
115 2a33_A Hypothetical protein; s 20.7 1.2E+02 0.0041 25.3 4.8 55 82-146 11-69 (215)
116 3gx8_A Monothiol glutaredoxin- 20.7 1.3E+02 0.0044 22.3 4.6 45 99-148 3-47 (121)
117 3csu_A Protein (aspartate carb 20.7 3.1E+02 0.011 24.1 7.8 73 82-171 152-229 (310)
118 2a2k_A M-phase inducer phospha 20.6 47 0.0016 26.0 2.1 44 85-129 90-141 (175)
119 4had_A Probable oxidoreductase 20.4 1.6E+02 0.0055 25.3 5.8 74 82-173 21-96 (350)
120 2qyt_A 2-dehydropantoate 2-red 20.2 59 0.002 27.5 2.8 24 83-107 7-30 (317)
No 1
>3jvi_A Protein tyrosine phosphatase; niaid, ssgcid, seattle structural genomics center for infect disease, parasitic protozoan, dysentery; 1.80A {Entamoeba histolytica} PDB: 3js5_A* 3ily_A 3ido_A*
Probab=100.00 E-value=2.2e-48 Score=325.70 Aligned_cols=155 Identities=50% Similarity=0.903 Sum_probs=142.0
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCCcCCCC
Q 039294 83 KPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIEITSISRPIRPSDFK 162 (253)
Q Consensus 83 ~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID~sh~sr~Lt~~~l~ 162 (253)
+|++|||||+||||||||||+||++++.++|+.+.|+|+||||.+|++|+++||+++++|+++|||++|++|+|+.+++.
T Consensus 3 ~m~~vLFVC~gN~cRSpmAE~~~~~~~~~~gl~~~~~v~SAGt~~~~~G~~~~~~a~~~l~~~Gid~~~~ar~l~~~~~~ 82 (161)
T 3jvi_A 3 GSMKLLFVCLGNICRSPAAEAVMKKVIQNHHLTEKYICDSAGTCSYHEGQQADSRMRKVGKSRGYQVDSISRPVVSSDFK 82 (161)
T ss_dssp -CEEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEESCCTTTTCBCCHHHHHHHHHTTCCCCCBCCBCCHHHHH
T ss_pred CCcEEEEECCCchhHHHHHHHHHHHHHHHcCCCCcEEEEeeecCCcccCCCCCHHHHHHHHHcCcCCCCeeeECCHHHhc
Confidence 46899999999999999999999999999999888999999999998899999999999999999999999999999999
Q ss_pred CCcEEEEEeccchHHHHHHhhhhhhhccCChhhhhHHhhhhhcccCCCCCcCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 039294 163 DFDLILAMDKQNRQDILEAFNRWKFREQLPEEAHKKVRLMCSYCKKHDETEVPDPYYGGPQGFEKVLDLLEDACESLLDS 242 (253)
Q Consensus 163 ~aDlIItM~~~~~~~L~~~~p~~~~~~~~P~~~~~kv~ll~~f~~~~~~~dIpDP~g~~~e~f~~v~d~I~~~v~~Ll~~ 242 (253)
+|||||+||+.|++.|.+.+| ....+||++|++|.+....|+|+||||++.+.|++++++|+++|+.|+++
T Consensus 83 ~~DlIl~Md~~~~~~l~~~~p---------~~~~~kv~ll~~~~~~~~~~~I~DPy~~~~~~f~~~~~~I~~~~~~ll~~ 153 (161)
T 3jvi_A 83 NFDYIFAMDNDNYYELLDRCP---------EQYKQKIFKMVDFCTTIKTTEVPDPYYGGEKGFHRVIDILEDACENLIIK 153 (161)
T ss_dssp HCSEEEESSHHHHHHHHHHSC---------GGGGGGEEEGGGGCSSCCCSSCCCCC--CHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeChHHHHHHHHhcC---------ccccceEEehhhhcCCcCCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998873 33457999999997655689999999999999999999999999999999
Q ss_pred HHhh
Q 039294 243 ILAE 246 (253)
Q Consensus 243 L~~~ 246 (253)
|+++
T Consensus 154 l~~~ 157 (161)
T 3jvi_A 154 LEEG 157 (161)
T ss_dssp HHHS
T ss_pred HHhc
Confidence 9875
No 2
>4etm_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.60A {Bacillus subtilis}
Probab=100.00 E-value=1.5e-48 Score=330.38 Aligned_cols=158 Identities=40% Similarity=0.730 Sum_probs=144.8
Q ss_pred CCCCCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCCC-CCCcccCCc
Q 039294 80 ATTKPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIEI-TSISRPIRP 158 (253)
Q Consensus 80 ~~~~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID~-sh~sr~Lt~ 158 (253)
....|+|||||||||||||||||+|||+++.++|+.+.|+|+||||.+++.|+++||+++++|+++|||+ +|++|+|+.
T Consensus 14 ~~~~M~kVLFVCtGNiCRSpmAE~i~r~~~~~~gl~~~~~v~SAGt~~~~~G~~~d~~a~~~l~~~Gid~s~h~ar~l~~ 93 (173)
T 4etm_A 14 GRGSMISVLFVCLGNICRSPMAEAIFRDLAAKKGLEGKIKADSAGIGGWHIGNPPHEGTQEILRREGISFDGMLARQVSE 93 (173)
T ss_dssp CCSSCEEEEEEESSSSSHHHHHHHHHHHHHHHTTCTTTEEEEEEESSCTTTTCCCCHHHHHHHHHTTCCCTTCCCCBCCH
T ss_pred CCCCccEEEEEeCCcchhhHHHHHHHHHHHHHcCCCCceEEeccccccCCCCCCCCHHHHHHHHHCCccccCCccccCCH
Confidence 5666899999999999999999999999999999988999999999999889999999999999999998 499999999
Q ss_pred CCCCCCcEEEEEeccchHHHHHHhhhhhhhccCChhhhhHHhhhhhcccCCCCCcCCCCCCCCHHHHHHHHHHHHHHHHH
Q 039294 159 SDFKDFDLILAMDKQNRQDILEAFNRWKFREQLPEEAHKKVRLMCSYCKKHDETEVPDPYYGGPQGFEKVLDLLEDACES 238 (253)
Q Consensus 159 ~~l~~aDlIItM~~~~~~~L~~~~p~~~~~~~~P~~~~~kv~ll~~f~~~~~~~dIpDP~g~~~e~f~~v~d~I~~~v~~ 238 (253)
+++++|||||+||+.|++.|.+.+| .....|++++.+|++..+..|||||||++ +|+++|++|+++|+.
T Consensus 94 ~d~~~~DlIl~Md~~~~~~l~~~~p---------~~~~~kv~~l~~~~~~~~~~dVpDPyy~~--~Fe~v~~~I~~~~~~ 162 (173)
T 4etm_A 94 QDLDDFDYIIAMDAENIGSLRSMAG---------FKNTSHIKRLLDYVEDSDLADVPDPYYTG--NFEEVCQLIKTGCEQ 162 (173)
T ss_dssp HHHHHCSEEEESSHHHHHHHHHHHT---------TSCCTTEEEGGGGSTTCSCCSCCCHHHHC--CHHHHHHHHHHHHHH
T ss_pred hhcCCCCEEEEeCchHHHHHHHHcC---------ccchhheeeeccccccCCCCcCCCCCCCC--HHHHHHHHHHHHHHH
Confidence 9999999999999999999998874 33457888999998766778999999876 599999999999999
Q ss_pred HHHHHHhhcC
Q 039294 239 LLDSILAENN 248 (253)
Q Consensus 239 Ll~~L~~~~~ 248 (253)
|+++|+++++
T Consensus 163 ll~~l~~e~~ 172 (173)
T 4etm_A 163 LLASIQKEKQ 172 (173)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHhcC
Confidence 9999988754
No 3
>1d1q_A Tyrosine phosphatase (E.C.3.1.3.48); beta-alpha-beta, hydrolase; HET: 4NP; 1.70A {Saccharomyces cerevisiae} SCOP: c.44.1.1 PDB: 1d2a_A* 1d1p_A*
Probab=100.00 E-value=3.5e-46 Score=311.94 Aligned_cols=153 Identities=32% Similarity=0.589 Sum_probs=137.9
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCc-EEEEeeccCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCCcC
Q 039294 81 TTKPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSK-FNIDSAGTIDYHEGNPADSRMRAASKRRGIEITSISRPIRPS 159 (253)
Q Consensus 81 ~~~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~-i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID~sh~sr~Lt~~ 159 (253)
..++++|||||+||||||||||+|||+++.++|+.++ |+|+||||.+++.|+++||+++++|+++|||++|++|+|+.+
T Consensus 4 ~~~~~~VLFVCtgN~cRSpmAEal~~~~~~~~gl~~~~~~v~SAGt~~~~~g~~~~p~a~~~l~~~Gid~s~~ar~l~~~ 83 (161)
T 1d1q_A 4 EKPKISVAFIALGNFCRSPMAEAIFKHEVEKANLENRFNKIDSFGTSNYHVGESPDHRTVSICKQHGVKINHKGKQIKTK 83 (161)
T ss_dssp CSCCEEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEEESSCTTBTCCCCHHHHHHHHHTTCCCCCCBCBCCGG
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHHHHHHcCCCCCeEEEEeccccCCcCCCCCCHHHHHHHHHcCcCCCceEeECCHH
Confidence 3456899999999999999999999999999999777 999999999988899999999999999999977999999999
Q ss_pred CCCCCcEEEEEeccchHHHHHHhhhhhhhccCChhhhhHHhhhhhcccCC--CCCcCCCCCCCCHHHHHHHHHHHHHHHH
Q 039294 160 DFKDFDLILAMDKQNRQDILEAFNRWKFREQLPEEAHKKVRLMCSYCKKH--DETEVPDPYYGGPQGFEKVLDLLEDACE 237 (253)
Q Consensus 160 ~l~~aDlIItM~~~~~~~L~~~~p~~~~~~~~P~~~~~kv~ll~~f~~~~--~~~dIpDP~g~~~e~f~~v~d~I~~~v~ 237 (253)
++.+|||||+||+.|++.|.+.+ |.....|++++.+|++.. ..|+|+||||++.+.|++++++|+++|+
T Consensus 84 ~~~~~DlIl~M~~~~~~~l~~~~---------p~~~~~kv~~l~~~~~~~~~~~~~i~DP~~~~~~~f~~~~~~I~~~~~ 154 (161)
T 1d1q_A 84 HFDEYDYIIGMDESNINNLKKIQ---------PEGSKAKVCLFGDWNTNDGTVQTIIEDPWYGDIQDFEYNFKQITYFSK 154 (161)
T ss_dssp GGGTCSEEEESSHHHHHHHHHHC---------CTTCSCEEEEGGGGCCCSSSSCSSCCCCTTSCHHHHHHHHHHHHHHHH
T ss_pred HHhhCCEEEEeCHHHHHHHHHHC---------CccchhhEEeHhhhcccccCCCCcCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999998776 444456888888986432 3599999999999999999999999999
Q ss_pred HHHHH
Q 039294 238 SLLDS 242 (253)
Q Consensus 238 ~Ll~~ 242 (253)
.|+++
T Consensus 155 ~ll~~ 159 (161)
T 1d1q_A 155 QFLKK 159 (161)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 99875
No 4
>1u2p_A Ptpase, low molecular weight protein-tyrosine- phosphatase; hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 1u2q_A
Probab=100.00 E-value=7.1e-46 Score=310.53 Aligned_cols=151 Identities=32% Similarity=0.573 Sum_probs=138.0
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCCcCCCCC
Q 039294 84 PFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIEITSISRPIRPSDFKD 163 (253)
Q Consensus 84 ~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID~sh~sr~Lt~~~l~~ 163 (253)
+++|||||+||||||||||+||++++.++|+.++|+|+||||.+++.|+++||+++++|+++|||++|++|+|+.+++.+
T Consensus 4 ~~~VLFVC~gN~cRSpmAEal~~~~~~~~gl~~~~~v~SAGt~~~~~G~~~~p~a~~~l~~~Gid~s~~ar~l~~~~~~~ 83 (163)
T 1u2p_A 4 PLHVTFVCTGNICRSPMAEKMFAQQLRHRGLGDAVRVTSAGTGNWHVGSCADERAAGVLRAHGYPTDHRAAQVGTEHLAA 83 (163)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHHHHTTCTTTEEEEEEESSCTTTTCCCCHHHHHHHHHTTCCCCCCCCBCCHHHHTS
T ss_pred CCEEEEEcCCcHhHHHHHHHHHHHHHHHCCCCCcEEEEecccCCCcCCCCCCHHHHHHHHHcCcCCCceeeECChhhccC
Confidence 57999999999999999999999999999998889999999999888999999999999999999779999999999999
Q ss_pred CcEEEEEeccchHHHHHHhhhhhhhccCChhhhhHHhhhhhcccCCC-C-CcCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 039294 164 FDLILAMDKQNRQDILEAFNRWKFREQLPEEAHKKVRLMCSYCKKHD-E-TEVPDPYYGGPQGFEKVLDLLEDACESLLD 241 (253)
Q Consensus 164 aDlIItM~~~~~~~L~~~~p~~~~~~~~P~~~~~kv~ll~~f~~~~~-~-~dIpDP~g~~~e~f~~v~d~I~~~v~~Ll~ 241 (253)
||||+||+.|++.|.+.+ |.. .|++++++|++... . |+|+||||++.+.|++++++|+++|+.|++
T Consensus 84 -DlIi~Md~~~~~~l~~~~---------p~~--~kv~~l~~~~~~~~~~~w~I~DP~~~~~~~f~~~~~~I~~~~~~ll~ 151 (163)
T 1u2p_A 84 -DLLVALDRNHARLLRQLG---------VEA--ARVRMLRSFDPRSGTHALDVEDPYYGDHSDFEEVFAVIESALPGLHD 151 (163)
T ss_dssp -SEEEESSHHHHHHHHHTT---------CCG--GGEEEGGGGSTTCCSSCCCCCCCTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred -CEEEEeCHHHHHHHHHHC---------CCc--ceEEehhhhcccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999988765 443 68899999975433 2 699999999999999999999999999999
Q ss_pred HHHhh
Q 039294 242 SILAE 246 (253)
Q Consensus 242 ~L~~~ 246 (253)
.|++.
T Consensus 152 ~l~~~ 156 (163)
T 1u2p_A 152 WVDER 156 (163)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 98754
No 5
>3n8i_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, hydrolase, protein-ligand complex; HET: NLA; 1.50A {Homo sapiens} SCOP: c.44.1.1 PDB: 5pnt_A* 1xww_A 1bvh_A 1dg9_A* 1phr_A 1pnt_A 1z12_A 1z13_A 1c0e_A 2p4u_A
Probab=100.00 E-value=1.8e-46 Score=312.97 Aligned_cols=153 Identities=41% Similarity=0.713 Sum_probs=138.3
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCCcCCC
Q 039294 82 TKPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIEITSISRPIRPSDF 161 (253)
Q Consensus 82 ~~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID~sh~sr~Lt~~~l 161 (253)
+.+++|||||+||||||||||+||++++.++|+.+.|+|+||||.+++.|+++||+++++|+++|||++|++++|+.+++
T Consensus 3 ~~~~~vLFVC~gN~cRSpmAE~~~~~~~~~~gl~~~~~v~SAGt~~~~~G~~~~~~a~~~l~~~Gid~~~~ar~l~~~~~ 82 (157)
T 3n8i_A 3 QATKSVLFVCLGNICRSPIAEAVFRKLVTDQNISENWRVDSAATSGYEIGNPPDYRGQSCMKRHGIPMSHVARQITKEDF 82 (157)
T ss_dssp -CCEEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEESSSTTTTCCCCHHHHHHHHHTTCCCCCCCCBCCHHHH
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHHHHHHcCCCCcEEEEeeecCccccCCCCCHHHHHHHHHcCcCCCCceeECCHHHc
Confidence 34789999999999999999999999999999977899999999999889999999999999999999999999999999
Q ss_pred CCCcEEEEEeccchHHHHHHhhhhhhhccCChhhhhHHhhhhhcccCCCCCcCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 039294 162 KDFDLILAMDKQNRQDILEAFNRWKFREQLPEEAHKKVRLMCSYCKKHDETEVPDPYYGGPQGFEKVLDLLEDACESLLD 241 (253)
Q Consensus 162 ~~aDlIItM~~~~~~~L~~~~p~~~~~~~~P~~~~~kv~ll~~f~~~~~~~dIpDP~g~~~e~f~~v~d~I~~~v~~Ll~ 241 (253)
.+|||||+||+.|++.|.+.+|.+ ....+||++|++|.+. ...+|+||||++.++|+++|++|+++|+.|++
T Consensus 83 ~~~DlIi~M~~~n~~~l~~~~p~~-------~~~~~kv~ll~~~~~~-~~~dVpDPy~~~~~~F~~v~~~I~~~~~~ll~ 154 (157)
T 3n8i_A 83 ATFDYILCMDESNLRDLNRKSNQV-------KTCKAKIELLGSYDPQ-KQLIIEDPYYGNDSDFETVYQQCVRCCRAFLE 154 (157)
T ss_dssp HHCSEEEESSHHHHHHHHHHHTTS-------SCCCCEEEEGGGGCTT-CCCCCCCCTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCcHHHHHHHHHCCCc-------cCccceEEEHHHhCcC-CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999988421 1235789999999643 23589999999999999999999999999997
Q ss_pred H
Q 039294 242 S 242 (253)
Q Consensus 242 ~ 242 (253)
+
T Consensus 155 ~ 155 (157)
T 3n8i_A 155 K 155 (157)
T ss_dssp C
T ss_pred H
Confidence 5
No 6
>2gi4_A Possible phosphotyrosine protein phosphatase; low molecular weight, protein tyrosine phosphatase, bacterial phosphatase; NMR {Campylobacter jejuni}
Probab=100.00 E-value=1.4e-46 Score=313.19 Aligned_cols=152 Identities=32% Similarity=0.585 Sum_probs=138.8
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCCCC-CCcccCCcCCCC
Q 039294 84 PFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIEIT-SISRPIRPSDFK 162 (253)
Q Consensus 84 ~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID~s-h~sr~Lt~~~l~ 162 (253)
|++|||||+||||||||||+||++++.++|+.++|+|+||||.+++.|+++||+++++|+++|||++ |++|+|+.+++.
T Consensus 1 m~~VLFVC~gNicRSpmAEai~~~~~~~~gl~~~~~v~SAGt~~~~~g~~~~~~a~~~l~~~Gid~s~~~ar~l~~~d~~ 80 (156)
T 2gi4_A 1 MKKILFICLGNICRSPMAEFIMKDLVKKANLEKEFFINSAGTSGEHDGEGMHYGTKNKLAQLNIEHKNFTSKKLTQKLCD 80 (156)
T ss_dssp CCEEEEECSSCSSHHHHHHHHHHHHHHHHTTTTTCEEEEEBSSCSSTTCCCCHHHHHHHHHTSCSCCCCCCCBCCHHHHT
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHhCCCCCcEEEEeeecCCcccCCCCCHHHHHHHHHcCCCccCCccccCCHHHhc
Confidence 3589999999999999999999999999999888999999999988899999999999999999984 899999999999
Q ss_pred CCcEEEEEeccchHHHHHHhhhhhhhccCChhhhhHHhhhhhcccCCCCCcCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 039294 163 DFDLILAMDKQNRQDILEAFNRWKFREQLPEEAHKKVRLMCSYCKKHDETEVPDPYYGGPQGFEKVLDLLEDACESLLDS 242 (253)
Q Consensus 163 ~aDlIItM~~~~~~~L~~~~p~~~~~~~~P~~~~~kv~ll~~f~~~~~~~dIpDP~g~~~e~f~~v~d~I~~~v~~Ll~~ 242 (253)
+|||||+||+.|++.|.+.+ |. ...|+++|.+|++....|+|+||||++ +|++++++|+++|+.|+++
T Consensus 81 ~~DlIi~Md~~~~~~l~~~~---------p~-~~~kv~~l~~~~~~~~~~~I~DP~~~~--~f~~v~~~I~~~~~~ll~~ 148 (156)
T 2gi4_A 81 ESDFLITMDNSNFKNVLKNF---------TN-TQNKVLKITDFSPSLNYDEVPDPWYSG--NFDETYKILSLACKNLLVF 148 (156)
T ss_dssp TCSEEECCCHHHHHHHHHHS---------CG-GGGGEECTTTTCSSCCCCSSCHHHHTS--CSHHHHHHHHHHHHHHHHH
T ss_pred cCCEEEEECChHHHHHHHHC---------CC-ccCeEEEehhhcCCCCCCCCCCCCCCC--HHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998776 43 346899999997544579999999987 9999999999999999999
Q ss_pred HHhhc
Q 039294 243 ILAEN 247 (253)
Q Consensus 243 L~~~~ 247 (253)
|++..
T Consensus 149 l~~~~ 153 (156)
T 2gi4_A 149 LSKHH 153 (156)
T ss_dssp HTTCS
T ss_pred HHHhc
Confidence 88764
No 7
>2cwd_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, structural genomics; 1.90A {Thermus thermophilus}
Probab=100.00 E-value=1.5e-45 Score=308.22 Aligned_cols=151 Identities=42% Similarity=0.740 Sum_probs=136.3
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCCcCCCC
Q 039294 83 KPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIEITSISRPIRPSDFK 162 (253)
Q Consensus 83 ~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID~sh~sr~Lt~~~l~ 162 (253)
++++|||||+||+|||||||+|||+++.++|+.++|+|+||||.+|+.|+++||+++++|+++|||++|++|+|+.+++.
T Consensus 3 ~~~~VLFVC~gN~cRSpmAEal~~~~~~~~gl~~~~~v~SAGt~~~~~g~~~~p~a~~~l~e~Gid~s~~ar~l~~~~~~ 82 (161)
T 2cwd_A 3 RPVRVLFVCLGNICRSPMAEGIFRKLLKERGLEDRFEVDSAGTGAWHVGEPMDPRARRVLEEEGAYFPHVARRLTREDVL 82 (161)
T ss_dssp CCEEEEEEESSSSSHHHHHHHHHHHHHHHHTCTTTEEEEEEESSCTTTTCCCCHHHHHHHHHHTCCCCCCCCBCCHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHHHHHHcCCCCcEEEEecccCCCccCCCCCHHHHHHHHHcCcCccccccCCCHhHhc
Confidence 56899999999999999999999999999998778999999999988899999999999999999977999999999999
Q ss_pred CCcEEEEEeccchHHHHHHhhhhhhhccCChhhhhHHhhhhhcccCCCCCcCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 039294 163 DFDLILAMDKQNRQDILEAFNRWKFREQLPEEAHKKVRLMCSYCKKHDETEVPDPYYGGPQGFEKVLDLLEDACESLLDS 242 (253)
Q Consensus 163 ~aDlIItM~~~~~~~L~~~~p~~~~~~~~P~~~~~kv~ll~~f~~~~~~~dIpDP~g~~~e~f~~v~d~I~~~v~~Ll~~ 242 (253)
+|||||+||+.|++.|.+.+|. . .+|++++.+|.+ .++|+||||++.+.|++++++|+++|+.|+++
T Consensus 83 ~~DlIi~M~~~~~~~l~~~~p~---------~-~~kv~~l~~~~~---~~~i~DP~~~~~~~f~~~~~~I~~~v~~ll~~ 149 (161)
T 2cwd_A 83 AYDHILVMDRENLEEVLRRFPE---------A-RGKVRLVLEELG---GGEVQDPYYGDLEDFREVYWTLEAALQAFLDR 149 (161)
T ss_dssp HCSEEEESSHHHHHHHHHHCGG---------G-TTTEEEGGGGGT---CCCCCCCTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCEEEECChHHHHHHHHHCCC---------c-cCcEEeehhhcC---CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999887743 2 357877777752 25999999999999999999999999999999
Q ss_pred HHhh
Q 039294 243 ILAE 246 (253)
Q Consensus 243 L~~~ 246 (253)
|++.
T Consensus 150 l~~~ 153 (161)
T 2cwd_A 150 HGSP 153 (161)
T ss_dssp HC--
T ss_pred HHhc
Confidence 8543
No 8
>3rof_A Low molecular weight protein-tyrosine-phosphatase; phosphatase, hydrolase; 1.03A {Staphylococcus aureus}
Probab=100.00 E-value=3.1e-45 Score=306.01 Aligned_cols=148 Identities=34% Similarity=0.630 Sum_probs=134.6
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCCCC-CCcccCCcCCC
Q 039294 83 KPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIEIT-SISRPIRPSDF 161 (253)
Q Consensus 83 ~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID~s-h~sr~Lt~~~l 161 (253)
.|++|||||+||+|||||||+||++++.++|+++ |+|+||||.+++.|+++||+++++|+++|||++ |++|+|+.++
T Consensus 5 ~m~~vLFVC~gN~cRSpmAE~i~~~~~~~~gl~~-~~v~SAGt~~~~~G~~~~~~a~~~l~~~Gid~~~~~ar~l~~~~- 82 (158)
T 3rof_A 5 GMVDVAFVCLGNICRSPMAEAIMRQRLKDRNIHD-IKVHSRGTGSWNLGEPPHEGTQKILNKHNIPFDGMISELFEATD- 82 (158)
T ss_dssp SCEEEEEEESSSSSHHHHHHHHHHHHHHHTTCCS-EEEEEEETTCCSTTCCCCHHHHHHHHHTTCCCTTCCCCBCCTTC-
T ss_pred CCCEEEEEeCCchhHHHHHHHHHHHHHHHcCCCC-eEEEecccCCcccCCCCCHHHHHHHHHcCCCcCCCcceECChhh-
Confidence 4689999999999999999999999999999876 999999999998899999999999999999985 9999999988
Q ss_pred CCCcEEEEEeccchHHHHHHhhhhhhhccCChhhhhHHhhhhhcccCCCCCcCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 039294 162 KDFDLILAMDKQNRQDILEAFNRWKFREQLPEEAHKKVRLMCSYCKKHDETEVPDPYYGGPQGFEKVLDLLEDACESLLD 241 (253)
Q Consensus 162 ~~aDlIItM~~~~~~~L~~~~p~~~~~~~~P~~~~~kv~ll~~f~~~~~~~dIpDP~g~~~e~f~~v~d~I~~~v~~Ll~ 241 (253)
+|||||+||+.|++.|.+.+| ... .|+++|++|.+... |+|+||||++ .|++++++|+++|+.|++
T Consensus 83 -~~DlIi~Md~~~~~~l~~~~p---------~~~-~kv~~l~~~~~~~~-~~VpDPyy~~--~F~~v~~~Ie~~~~~ll~ 148 (158)
T 3rof_A 83 -DFDYIVAMDQSNVDNIKSINP---------NLK-GQLFKLLEFSNMEE-SDVPDPYYTN--NFEGVYDMVLSSCDNLID 148 (158)
T ss_dssp -CCSEEEESSHHHHHHHHHHCT---------TCC-SEEEEGGGGCCSSC-SSCCCHHHHC--CHHHHHHHHHHHHHHHHH
T ss_pred -cCCEEEEcCHHHHHHHHHhcC---------CCc-CEEEEehhhccCCC-CcCCCCCCCc--hHHHHHHHHHHHHHHHHH
Confidence 999999999999999998874 332 38999999975333 9999999876 699999999999999999
Q ss_pred HHHhh
Q 039294 242 SILAE 246 (253)
Q Consensus 242 ~L~~~ 246 (253)
+|+++
T Consensus 149 ~l~~~ 153 (158)
T 3rof_A 149 YIVKD 153 (158)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 99876
No 9
>4etn_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.10A {Bacillus subtilis} PDB: 4eti_A 1zgg_A
Probab=100.00 E-value=3.4e-45 Score=312.66 Aligned_cols=151 Identities=28% Similarity=0.473 Sum_probs=136.8
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCCcCCC
Q 039294 82 TKPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIEITSISRPIRPSDF 161 (253)
Q Consensus 82 ~~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID~sh~sr~Lt~~~l 161 (253)
.++++|||||+||||||||||+|||+++.++|+ .|+|+||||.+++ |+++||+++++|+++|||++|++|+|+.+++
T Consensus 32 ~~~~~VLFVC~gNiCRSpmAEai~r~~~~~~g~--~~~v~SAGt~~~~-G~~~dp~a~~vl~e~Gidishrar~lt~~d~ 108 (184)
T 4etn_A 32 RGSMDIIFVCTGNTSRSPMAEALFKSIAEREGL--NVNVRSAGVFASP-NGKATPHAVEALFEKHIALNHVSSPLTEELM 108 (184)
T ss_dssp --CEEEEEEESSSSSHHHHHHHHHHHHHHHHTC--CEEEEEEETTCCT-TCBCCHHHHHHHHHTTCCCCCBCCBCCHHHH
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHHHHHhcCC--cEEEEeeecCCcC-CCCCCHHHHHHHHHcCCCchhccCcCCHHHc
Confidence 356899999999999999999999999998885 6999999999987 9999999999999999998899999999999
Q ss_pred CCCcEEEEEeccchHHHHHHhhhhhhhccCChhhhhHHhhhhhcccCCCCCcCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 039294 162 KDFDLILAMDKQNRQDILEAFNRWKFREQLPEEAHKKVRLMCSYCKKHDETEVPDPYYGGPQGFEKVLDLLEDACESLLD 241 (253)
Q Consensus 162 ~~aDlIItM~~~~~~~L~~~~p~~~~~~~~P~~~~~kv~ll~~f~~~~~~~dIpDP~g~~~e~f~~v~d~I~~~v~~Ll~ 241 (253)
.+|||||+||+.|++.|.+.+|. ...|+++|.+|++ ...|+|+||||++.+.|++++++|+++|+.|++
T Consensus 109 ~~~DlIltMd~~~~~~l~~~~P~----------~~~Kv~lL~~~~~-~~~~dVpDPy~g~~~~F~~v~d~I~~~i~~ll~ 177 (184)
T 4etn_A 109 ESADLVLAMTHQHKQIIASQFGR----------YRDKVFTLKEYVT-GSHGDVLDPFGGSIDIYKQTRDELEELLRQLAK 177 (184)
T ss_dssp HHCSEEEESSHHHHHHHHHHCGG----------GGGGEEEHHHHHH-SSCCCCCCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEcCcHHHHHHHHHCCC----------ccceEEEhhhhcc-CCCCccCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988753 2468899999963 357999999999999999999999999999999
Q ss_pred HHHhh
Q 039294 242 SILAE 246 (253)
Q Consensus 242 ~L~~~ 246 (253)
+|++.
T Consensus 178 ~l~~~ 182 (184)
T 4etn_A 178 QLKKD 182 (184)
T ss_dssp HHTC-
T ss_pred HHHhc
Confidence 99764
No 10
>4egs_A Ribose 5-phosphate isomerase RPIB; tyrosine phosphatase, dephosphorylation, hydrolase; 2.30A {Thermoanaerobacter tengcongensis}
Probab=100.00 E-value=7.9e-45 Score=309.30 Aligned_cols=149 Identities=30% Similarity=0.502 Sum_probs=132.0
Q ss_pred CCCCCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHH-HHcCCCC-CCCcccCC
Q 039294 80 ATTKPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAAS-KRRGIEI-TSISRPIR 157 (253)
Q Consensus 80 ~~~~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL-~e~GID~-sh~sr~Lt 157 (253)
-...++||||||+||||||||||+|||++.++.| ..|+|+||||.+++ |.++++.++++| +++|||+ +|++|+|+
T Consensus 30 m~~~~mkVLFVC~GNiCRSpmAE~l~r~~~~~~g--~~~~v~SAGt~~~~-g~~~~~~a~~~l~~e~Gidis~h~sr~l~ 106 (180)
T 4egs_A 30 MGRGSMRVLFVCTGNTCRSPMAEGIFNAKSKALG--KDWEAKSAGVFAPE-GFPASSEAVEVLKKEYGIDISDHRAKSLR 106 (180)
T ss_dssp ----CCEEEEEESSSSSHHHHHHHHHHHHHHHTT--CCCEEEEEETTCCT-TCCCCHHHHHHHHHHHCCCCTTCCCCBCC
T ss_pred CCCCCeEEEEEeCCCcccCHHHHHHHHHHHHhcC--CceEEEEeeecCcC-CCCCChHHHHHHHHHcCcCcccCcccccC
Confidence 3445789999999999999999999999987766 47999999999987 889999999998 5789998 59999999
Q ss_pred cCCCCCCcEEEEEeccchHHHHHHhhhhhhhccCChhhhhHHhhhhhcccCCCCCcCCCCCCCCHHHHHHHHHHHHHHHH
Q 039294 158 PSDFKDFDLILAMDKQNRQDILEAFNRWKFREQLPEEAHKKVRLMCSYCKKHDETEVPDPYYGGPQGFEKVLDLLEDACE 237 (253)
Q Consensus 158 ~~~l~~aDlIItM~~~~~~~L~~~~p~~~~~~~~P~~~~~kv~ll~~f~~~~~~~dIpDP~g~~~e~f~~v~d~I~~~v~ 237 (253)
.+++++|||||+||++|++.|.+.+|. ...|+++|.+|.+ ..|+|+||||++.+.|++++++|+++|+
T Consensus 107 ~~d~~~~DlIi~Md~~~~~~l~~~~p~----------~~~kv~~l~~~~~--~~~dI~DPy~~~~e~f~~v~~~I~~~i~ 174 (180)
T 4egs_A 107 EEDLKGADLVLAMAFSHKRSLVSQYPE----------YADKIFTIKEFVG--LEGDVEDPYGMPLEVYKKTAEELSGLID 174 (180)
T ss_dssp SHHHHHCSEEEESSHHHHHHHHHHSTT----------SGGGEEETTTTTT--CCSCCCCCTTCCHHHHHHHHHHHHHHHH
T ss_pred hhhCcCCCEEEEcCHHHHHHHHHhCcc----------cccceeehhhccc--cCCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999988742 2468999999964 5799999999999999999999999999
Q ss_pred HHHHHH
Q 039294 238 SLLDSI 243 (253)
Q Consensus 238 ~Ll~~L 243 (253)
.|+++|
T Consensus 175 ~ll~kL 180 (180)
T 4egs_A 175 KLIEKL 180 (180)
T ss_dssp HHHHHC
T ss_pred HHHHcC
Confidence 999875
No 11
>2wmy_A WZB, putative acid phosphatase WZB; hydrolase; 2.21A {Escherichia coli}
Probab=100.00 E-value=1.6e-42 Score=286.77 Aligned_cols=142 Identities=27% Similarity=0.437 Sum_probs=125.4
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCCC-CCCcccCCcCCC
Q 039294 83 KPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIEI-TSISRPIRPSDF 161 (253)
Q Consensus 83 ~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID~-sh~sr~Lt~~~l 161 (253)
.+++|||||+||+|||||||+|||+++. +|+|+||||.+ +.|+++||+++++|+++|||+ +|++|+|+.+++
T Consensus 7 mm~~VLFVC~gN~cRSpmAEal~r~~~~------~~~v~SAGt~~-~~g~~~~p~a~~~l~e~Gid~~~~~ar~l~~~~~ 79 (150)
T 2wmy_A 7 MFDSILVICTGNICRSPIGERLLRRLLP------SKKINSAGVGA-LVDHTADESAIRVAEKNGLCLKGHRGTKFTSALA 79 (150)
T ss_dssp CCCEEEEEESSSSSHHHHHHHHHHHHCT------TSEEEEEETTC-CTTCCCCHHHHHHHHHTTCCCTTCCCCBCCHHHH
T ss_pred hcCEEEEEcCCchHHHHHHHHHHHHhcC------CCEEEeccccC-CCCCCCCHHHHHHHHHcCCCccCCcccCCCHHHh
Confidence 3569999999999999999999999874 49999999987 559999999999999999998 599999999999
Q ss_pred CCCcEEEEEeccchHHHHHHhhhhhhhccCChhhhhHHhhhhhcccCCCCCcCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 039294 162 KDFDLILAMDKQNRQDILEAFNRWKFREQLPEEAHKKVRLMCSYCKKHDETEVPDPYYGGPQGFEKVLDLLEDACESLLD 241 (253)
Q Consensus 162 ~~aDlIItM~~~~~~~L~~~~p~~~~~~~~P~~~~~kv~ll~~f~~~~~~~dIpDP~g~~~e~f~~v~d~I~~~v~~Ll~ 241 (253)
.+|||||+||+.|++.+...+|. ..+|++++.+|.+ ..+|+||||++.++|++++++|+++|+.|++
T Consensus 80 ~~~DlIi~m~~~~~~~l~~~~p~----------~~~kv~~l~~~~~---~~~i~DP~~~~~~~f~~~~~~i~~~i~~ll~ 146 (150)
T 2wmy_A 80 RQYDLLLVMEYSHLEQISRIAPE----------ARGKTMLFGHWLD---SKEIPDPYRMSDEAFDSVYQLLEQASKRWAE 146 (150)
T ss_dssp TTCSEEEESCHHHHHHHHHHCGG----------GGGGEEETTTTSS---SCCCCCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCEEEEcCHHHHHHHHHhCCC----------ccceEeehHHhCC---CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988887742 2357777766642 2499999999999999999999999999999
Q ss_pred HHH
Q 039294 242 SIL 244 (253)
Q Consensus 242 ~L~ 244 (253)
+|+
T Consensus 147 ~l~ 149 (150)
T 2wmy_A 147 KLG 149 (150)
T ss_dssp HTC
T ss_pred HHh
Confidence 874
No 12
>1p8a_A Protein tyrosine phosphatase; hydrolase; NMR {Tritrichomonas foetus} SCOP: c.44.1.1
Probab=100.00 E-value=3.4e-43 Score=289.38 Aligned_cols=141 Identities=38% Similarity=0.641 Sum_probs=124.4
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCCC-CCCcccCCcCCC
Q 039294 83 KPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIEI-TSISRPIRPSDF 161 (253)
Q Consensus 83 ~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID~-sh~sr~Lt~~~l 161 (253)
++++|||||+||+|||||||+||++++.+ .|+|+||||.+++.|+++||+++++|+++|||+ +|++|+++.+++
T Consensus 3 ~~~~VLFVC~gN~cRSpmAEal~~~~~~~-----~~~v~SAGt~~~~~g~~~~p~a~~~l~e~Gid~s~~~sr~l~~~~~ 77 (146)
T 1p8a_A 3 EKKAVLFVCLGNICRSPACEGICRDMVGD-----KLIIDSAATSGFHVGQSPDTRSQKVCKSNGVDISKQRARQITKADF 77 (146)
T ss_dssp CCCCEEEESSSSCSSSTTHHHHHHHHHSS-----CSSCEEECSCTTSCSCSCTHHHHHHHHHHSCCCCCCCCCCCCSHHH
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHHhcCC-----CEEEEeeecCCcccCCCCCHHHHHHHHHcCCChhcCeeccCCHhHh
Confidence 45789999999999999999999999863 489999999998889999999999999999998 599999999999
Q ss_pred CCCcEEEEEeccchHHHHHHhhhhhhhccCChhhhhHHhhhhhcccCCCCCcCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 039294 162 KDFDLILAMDKQNRQDILEAFNRWKFREQLPEEAHKKVRLMCSYCKKHDETEVPDPYYGGPQGFEKVLDLLEDACESLLD 241 (253)
Q Consensus 162 ~~aDlIItM~~~~~~~L~~~~p~~~~~~~~P~~~~~kv~ll~~f~~~~~~~dIpDP~g~~~e~f~~v~d~I~~~v~~Ll~ 241 (253)
.+|||||+||+.|++.|.+.+| ....+|++++.+ . |+|+||||++ +.|++++++|+++|+.|++
T Consensus 78 ~~~DlIi~m~~~~~~~l~~~~p---------~~~~~kv~~l~~-----~-~~i~DP~~~~-~~f~~~~~~I~~~v~~ll~ 141 (146)
T 1p8a_A 78 SKFDVIAALDQSILSDINSMKP---------SNCRAKVVLFNP-----P-NGVDDPYYSS-DGFPTMFASISKEMKPFLT 141 (146)
T ss_dssp HSCSEEEESSHHHHHHHHHHCC---------SSCSCEEEECSC-----T-TSSCCCSSSS-SSHHHHHHHHHHTTHHHHH
T ss_pred hcCCEEEEeChHHHHHHHHHCC---------cccCCeEEEeCC-----C-CCCCCCCCCC-HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999887764 322346655533 1 7999999998 9999999999999999999
Q ss_pred HHH
Q 039294 242 SIL 244 (253)
Q Consensus 242 ~L~ 244 (253)
+|+
T Consensus 142 ~l~ 144 (146)
T 1p8a_A 142 EHG 144 (146)
T ss_dssp HHT
T ss_pred HHh
Confidence 874
No 13
>2fek_A Low molecular weight protein-tyrosine- phosphatase WZB; phosphate binding, hydrolase; NMR {Escherichia coli K12}
Probab=100.00 E-value=9.1e-42 Score=287.34 Aligned_cols=143 Identities=29% Similarity=0.476 Sum_probs=126.9
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCCC-CCCcccCCcCCC
Q 039294 83 KPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIEI-TSISRPIRPSDF 161 (253)
Q Consensus 83 ~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID~-sh~sr~Lt~~~l 161 (253)
++++|||||+||+|||||||+||++++. +|+|+||||.+ +.|+++||+++++|+++|||+ +|++|+|+.+++
T Consensus 21 mm~~VLFVCtgN~cRSpmAEal~r~~~~------~~~v~SAGt~~-~~g~~~~p~a~~vl~e~Gid~s~~~sr~l~~~~~ 93 (167)
T 2fek_A 21 MFNNILVVCVGNICRSPTAERLLQRYHP------ELKVESAGLGA-LVGKGADPTAISVAAEHQLSLEGHCARQISRRLC 93 (167)
T ss_dssp CCCEEEEEESSSSSHHHHHHHHHHHHCT------TCEEEEEETTC-CTTCCCCHHHHHHHHHTTCCCTTCCCCBCCHHHH
T ss_pred ccCeEEEEcCCcHHHHHHHHHHHHHhcC------CeEEEeeecCC-CCCCCCCHHHHHHHHHcCCCccCCcCccCCHHHh
Confidence 3569999999999999999999999874 49999999987 459999999999999999998 589999999999
Q ss_pred CCCcEEEEEeccchHHHHHHhhhhhhhccCChhhhhHHhhhhhcccCCCCCcCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 039294 162 KDFDLILAMDKQNRQDILEAFNRWKFREQLPEEAHKKVRLMCSYCKKHDETEVPDPYYGGPQGFEKVLDLLEDACESLLD 241 (253)
Q Consensus 162 ~~aDlIItM~~~~~~~L~~~~p~~~~~~~~P~~~~~kv~ll~~f~~~~~~~dIpDP~g~~~e~f~~v~d~I~~~v~~Ll~ 241 (253)
.+|||||+||+.|++.+...+|. ...|++++.+|.+ ..+|+||||++.++|++++++|+++|+.|++
T Consensus 94 ~~~DlIitM~~~~~~~l~~~~p~----------~~~kv~~l~~w~~---~~~I~DP~~~~~~~f~~v~~~I~~~v~~ll~ 160 (167)
T 2fek_A 94 RNYDLILTMEKRHIERLCEMAPE----------MRGKVMLFGHWDN---ECEIPDPYRKSRETFAAVYTLLERSARQWAQ 160 (167)
T ss_dssp HHSSEEEESCHHHHHHHHHHCGG----------GGGGEEEGGGGTT---TCCCCCCTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCEEEEcCHHHHHHHHHhCCc----------ccceEEehHHhCC---CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988887742 2357777777742 2489999999999999999999999999999
Q ss_pred HHHh
Q 039294 242 SILA 245 (253)
Q Consensus 242 ~L~~ 245 (253)
+|++
T Consensus 161 ~l~~ 164 (167)
T 2fek_A 161 ALNA 164 (167)
T ss_dssp HHHS
T ss_pred HHHh
Confidence 9864
No 14
>2wja_A Putative acid phosphatase WZB; hydrolase; 2.50A {Escherichia coli}
Probab=100.00 E-value=1.1e-41 Score=287.05 Aligned_cols=141 Identities=28% Similarity=0.452 Sum_probs=120.6
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCCC-CCCcccCCcCCCC
Q 039294 84 PFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIEI-TSISRPIRPSDFK 162 (253)
Q Consensus 84 ~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID~-sh~sr~Lt~~~l~ 162 (253)
+++|||||+||+|||||||+|||+++. +|+|+||||.+ +.|+++||+++++|+++|||+ +|++|+|+.+++.
T Consensus 26 m~~VLFVCtgNicRSpmAEal~r~~~~------~~~v~SAGt~~-~~g~~~~p~a~~vl~e~Gid~s~~~sr~l~~~~~~ 98 (168)
T 2wja_A 26 FDSILVICTGNICRSPIGERLLRRLLP------SKKINSAGVGA-LVDHAADESAIRVAEKNGLCLKGHRGTKFTSALAR 98 (168)
T ss_dssp CSEEEEEESSSSSHHHHHHHHHHHHST------TSEEEEEETTC-CTTCCCCHHHHHC---CCCCCTTCCCCBCCHHHHT
T ss_pred cCEEEEEcCCcHHHHHHHHHHHHHhcC------CeEEEeeecCC-CCCCCCCHHHHHHHHHcCCCcccCccCCCChhHhc
Confidence 469999999999999999999999874 49999999987 559999999999999999998 5999999999999
Q ss_pred CCcEEEEEeccchHHHHHHhhhhhhhccCChhhhhHHhhhhhcccCCCCCcCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 039294 163 DFDLILAMDKQNRQDILEAFNRWKFREQLPEEAHKKVRLMCSYCKKHDETEVPDPYYGGPQGFEKVLDLLEDACESLLDS 242 (253)
Q Consensus 163 ~aDlIItM~~~~~~~L~~~~p~~~~~~~~P~~~~~kv~ll~~f~~~~~~~dIpDP~g~~~e~f~~v~d~I~~~v~~Ll~~ 242 (253)
+|||||+||+.|++.+...+| . ..+|++++.+|.+ ..+|+||||++.++|++++++|+++|+.|+++
T Consensus 99 ~~DlIitM~~~~~~~l~~~~p---------~-~~~kv~~l~~w~~---~~~I~DP~~~~~~~f~~v~~~I~~~v~~ll~~ 165 (168)
T 2wja_A 99 QYDLLLVMEYSHLEQISRIAP---------E-ARGKTMLFGHWLD---SKEIPDPYRMSDEAFDSVYQLLEQASKRWAEK 165 (168)
T ss_dssp TCSEEEESSHHHHHHHHHHCT---------T-TGGGEEETTCC------CCCCCCTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCEEEEcCHHHHHHHHHhCC---------c-ccceEEeeHhhCC---CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998887774 2 2357777766542 14999999999999999999999999999988
Q ss_pred HH
Q 039294 243 IL 244 (253)
Q Consensus 243 L~ 244 (253)
|+
T Consensus 166 l~ 167 (168)
T 2wja_A 166 LG 167 (168)
T ss_dssp TC
T ss_pred Hh
Confidence 73
No 15
>3rh0_A Arsenate reductase; oxidoreductase; 1.72A {Corynebacterium glutamicum}
Probab=100.00 E-value=8.5e-41 Score=276.39 Aligned_cols=131 Identities=22% Similarity=0.370 Sum_probs=112.8
Q ss_pred CCCCCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCCC-CCCcccCCc
Q 039294 80 ATTKPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIEI-TSISRPIRP 158 (253)
Q Consensus 80 ~~~~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID~-sh~sr~Lt~ 158 (253)
.+..|++|||||+||+|||||||+|||+++. ++|+|+||||.+ |+++||+++++|+++|||+ +|++|+|+.
T Consensus 16 ~~~~~~~VLFVC~gN~cRSpmAEal~~~~~~-----~~~~v~SAGt~~---g~~~dp~a~~vl~e~Gidis~h~ar~l~~ 87 (148)
T 3rh0_A 16 RGSHMKSVLFVCVGNGGKSQMAAALAQKYAS-----DSVEIHSAGTKP---AQGLNQLSVESIAEVGADMSQGIPKAIDP 87 (148)
T ss_dssp ----CCEEEEEESSSSSHHHHHHHHHHHHCC-----TTSEEEEEESSC---CSSCCHHHHHHHHHTTCCCTTCCCCBCCH
T ss_pred CcCCCCEEEEECCCchhHHHHHHHHHHHhcC-----CCEEEEecccCC---CCCCCHHHHHHHHHcCCCcCCCeeeECCH
Confidence 3445689999999999999999999999884 469999999997 8899999999999999998 599999999
Q ss_pred CCCCCCcEEEEEeccchHHHHHHhhhhhhhccCChhhhhHHhhhhhcccCCCCCcCCCCCCCCHHHHHHHHHHHHHHHHH
Q 039294 159 SDFKDFDLILAMDKQNRQDILEAFNRWKFREQLPEEAHKKVRLMCSYCKKHDETEVPDPYYGGPQGFEKVLDLLEDACES 238 (253)
Q Consensus 159 ~~l~~aDlIItM~~~~~~~L~~~~p~~~~~~~~P~~~~~kv~ll~~f~~~~~~~dIpDP~g~~~e~f~~v~d~I~~~v~~ 238 (253)
+++++|||||+||+.+. +.||..+ +++ + ..|+|+||||++.++|++++++|+++|+.
T Consensus 88 ~~~~~~DlIitM~~~~~-------------~~~p~~~-~k~--~-------~~w~VpDPy~~~~~~F~~v~d~I~~~v~~ 144 (148)
T 3rh0_A 88 ELLRTVDRVVILGDDAQ-------------VDMPESA-QGA--L-------ERWSIEEPDAQGMERMRIVRDQIDNRVQA 144 (148)
T ss_dssp HHHHHCSEEEEESSSCC-------------CCCCTTC-CSE--E-------EEECCCCCSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCEEEEecChHH-------------hhCccCC-CCE--e-------ecCCcCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999998875 3356543 232 1 35899999999999999999999999999
Q ss_pred HHH
Q 039294 239 LLD 241 (253)
Q Consensus 239 Ll~ 241 (253)
|++
T Consensus 145 Ll~ 147 (148)
T 3rh0_A 145 LLA 147 (148)
T ss_dssp HHC
T ss_pred HHh
Confidence 974
No 16
>2l17_A Synarsc, arsenate reductase; alpha/beta sandwich, oxidoreductase; NMR {Synechocystis} PDB: 2l18_A 2l19_A
Probab=100.00 E-value=4.7e-40 Score=267.24 Aligned_cols=128 Identities=25% Similarity=0.411 Sum_probs=110.6
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCCC-CCCcccCCcCCCC
Q 039294 84 PFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIEI-TSISRPIRPSDFK 162 (253)
Q Consensus 84 ~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID~-sh~sr~Lt~~~l~ 162 (253)
|++|||||+||+|||||||+||++++. ++|+|+||||. |+++||+++++|+++|||+ +|++|+|+.+++.
T Consensus 4 m~~VLFVC~gN~cRSpmAEa~~~~~~~-----~~~~v~SAGt~----g~~~~~~a~~~l~e~Gid~s~~~sr~l~~~~~~ 74 (134)
T 2l17_A 4 MKKVMFVCKRNSCRSQMAEGFAKTLGA-----GKIAVTSCGLE----SSRVHPTAIAMMEEVGIDISGQTSDPIENFNAD 74 (134)
T ss_dssp CEEEEEECCSSTHHHHHHHHHHHHHSB-----TTEEEEEECCT----TSSCCHHHHHHHHTTTCCCSSCCCCCGGGCCGG
T ss_pred CCEEEEEeCCchHHHHHHHHHHHHHcC-----CCEEEEcccCC----CCCCCHHHHHHHHHcCCCcccCccccCChHHhc
Confidence 569999999999999999999999985 36999999997 6789999999999999998 5999999999999
Q ss_pred CCcEEEEEeccchHHHHHHhhhhhhhccCCh-hhhhHHhhhhhcccCCCCCcCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 039294 163 DFDLILAMDKQNRQDILEAFNRWKFREQLPE-EAHKKVRLMCSYCKKHDETEVPDPYYGGPQGFEKVLDLLEDACESLLD 241 (253)
Q Consensus 163 ~aDlIItM~~~~~~~L~~~~p~~~~~~~~P~-~~~~kv~ll~~f~~~~~~~dIpDP~g~~~e~f~~v~d~I~~~v~~Ll~ 241 (253)
+|||||+||+.+. .+|. ...+++ + .+|+|+||||++.++|++++++|+++|+.|++
T Consensus 75 ~~DlIi~md~~~~--------------~~p~~~~~~~~-----~----~~~~i~DP~~~~~~~f~~~~~~i~~~v~~ll~ 131 (134)
T 2l17_A 75 DYDVVISLCGCGV--------------NLPPEWVTQEI-----F----EDWQLEDPDGQSLEVFRTVRGQVKERVENLIA 131 (134)
T ss_dssp GCSEEEECSCSCS--------------CCCTHHHHSSE-----E----EECCCCCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCEEEEeCchhh--------------hCcccccCCCe-----e----ccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999965541 2452 112232 1 35899999999999999999999999999998
Q ss_pred HH
Q 039294 242 SI 243 (253)
Q Consensus 242 ~L 243 (253)
+|
T Consensus 132 ~l 133 (134)
T 2l17_A 132 KI 133 (134)
T ss_dssp HH
T ss_pred Hc
Confidence 86
No 17
>1jf8_A Arsenate reductase; ptpase I fold, P-loop, sulfinic acid, oxidoreductase; 1.12A {Staphylococcus aureus} SCOP: c.44.1.1 PDB: 1jfv_A 2fxi_A 1lju_A* 1rxi_A 1rxe_A 1ljl_A 2cd7_A 1lk0_A
Probab=100.00 E-value=1.5e-39 Score=263.38 Aligned_cols=127 Identities=25% Similarity=0.265 Sum_probs=108.5
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCCC-CCCcccCCcCCCC
Q 039294 84 PFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIEI-TSISRPIRPSDFK 162 (253)
Q Consensus 84 ~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID~-sh~sr~Lt~~~l~ 162 (253)
+++|||||+||+|||||||+||++++. ++|+|+||||.+ + ++||+++++|+++|||+ +|++|+++.+++.
T Consensus 3 ~~~VLFVC~gN~cRSpmAEa~~~~~~~-----~~~~v~SAGt~~-~---~~~p~a~~~l~~~Gid~s~~~ar~l~~~~~~ 73 (131)
T 1jf8_A 3 KKTIYFISTGNSARSQMAEGWGKEILG-----EGWNVYSAGIET-H---GVNPKAIEAMKEVDIDISNHTSDLIDNDILK 73 (131)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHST-----TTEEEEEEESSC-C---CCCHHHHHHHHHTTCCCTTCCCCBCCHHHHH
T ss_pred CCEEEEEcCCcchHHHHHHHHHHHhcC-----CCEEEEcCcCCC-C---CCCHHHHHHHHHcCCCcccCccccCChHHhc
Confidence 368999999999999999999999874 469999999997 2 69999999999999998 5899999999999
Q ss_pred CCcEEEEEeccchHHHHHHhhhhhhhccCChhhhhHHhhhhhcccCCCCCcCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 039294 163 DFDLILAMDKQNRQDILEAFNRWKFREQLPEEAHKKVRLMCSYCKKHDETEVPDPYYGGPQGFEKVLDLLEDACESLLD 241 (253)
Q Consensus 163 ~aDlIItM~~~~~~~L~~~~p~~~~~~~~P~~~~~kv~ll~~f~~~~~~~dIpDP~g~~~e~f~~v~d~I~~~v~~Ll~ 241 (253)
++||||+||+.+ .+. +|..+ ++++++ +|+|+||||++.+.|++++++|+++|+.|++
T Consensus 74 ~~D~Ii~m~~~~----~~~---------~p~~~-~~~~~~--------~~~i~DP~g~~~~~f~~~~~~i~~~~~~l~~ 130 (131)
T 1jf8_A 74 QSDLVVTLCSDA----DNN---------CPILP-PNVKKE--------HWGFDDPAGKEWSEFQRVRDEIKLAIEKFKL 130 (131)
T ss_dssp HCSEEEECSHHH----HHH---------SCCCC-TTSEEE--------ECCCCCCTTSCHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCEEEEcCcHH----Hhh---------CcCCC-CCcEEE--------EecCCCcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 999999997532 222 34332 344433 4899999999999999999999999999985
No 18
>1y1l_A Arsenate reductase (ARSC); detoxification, cadmium, oxidized form, structural genomics, PSI, protein structure initiative; 2.80A {Archaeoglobus fulgidus} SCOP: c.44.1.1
Probab=100.00 E-value=4.2e-39 Score=258.29 Aligned_cols=122 Identities=24% Similarity=0.425 Sum_probs=106.7
Q ss_pred EEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCCCC-CCcccCCcCCCCCC
Q 039294 86 SVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIEIT-SISRPIRPSDFKDF 164 (253)
Q Consensus 86 ~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID~s-h~sr~Lt~~~l~~a 164 (253)
||||||+||+|||||||+|||+++. +|+|+||||.+ |+++||+++++|+++||| + |++|+|+.+++.+|
T Consensus 1 ~VLFVC~gN~cRSpmAEa~~~~~~~------~~~v~SAGt~~---g~~~~~~a~~~l~e~Gid-s~~~sr~l~~~~~~~~ 70 (124)
T 1y1l_A 1 KVLFVCIHNTARSVMAEALFNAMAK------SWKAESAGVEK---AERVDETVKRLLAERGLK-AKEKPRTVDEVNLDDF 70 (124)
T ss_dssp CEEEEESSCSSHHHHHHHHHHTTCS------SCCEEEEESSC---CSSCCHHHHHHHHTTTCC-CCSSCCBGGGSCGGGC
T ss_pred CEEEEeCCChhHHHHHHHHHHHhcC------CEEEEecCCCC---CCCCCHHHHHHHHHcCcC-CCCccccCChhHhcCC
Confidence 5999999999999999999999874 58999999998 889999999999999999 6 89999999999999
Q ss_pred cEEEEEeccchHHHHHHhhhhhhhccCChhhhhHHhhhhhcccCCCCCcCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 039294 165 DLILAMDKQNRQDILEAFNRWKFREQLPEEAHKKVRLMCSYCKKHDETEVPDPYYGGPQGFEKVLDLLEDACESLLD 241 (253)
Q Consensus 165 DlIItM~~~~~~~L~~~~p~~~~~~~~P~~~~~kv~ll~~f~~~~~~~dIpDP~g~~~e~f~~v~d~I~~~v~~Ll~ 241 (253)
||||+||+. + .+|... +++++ .+|+|+||||++.+.|++++++|+++|+.|++
T Consensus 71 D~Ii~m~~~------~---------~~p~~~-~~~~~--------~~~~i~DP~~~~~~~f~~~~~~i~~~v~~ll~ 123 (124)
T 1y1l_A 71 DLIVTVCEE------S---------SCVVLP-TDKPV--------TRWHIENPAGKDEGTYRRVLAEIEERVKKLVG 123 (124)
T ss_dssp SCEEEEECS------S---------CCBCCS-CSSCE--------EEEECCCCTTTCTTHHHHHHHHHHHHHHHHTT
T ss_pred CEEEEecCc------c---------cCcCCC-CCeee--------cceecCCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 999999874 1 245432 33332 35899999999999999999999999999875
No 19
>1jl3_A Arsenate reductase; alpha-beta fold, PTP-loop, oxidoreductase; 1.60A {Bacillus subtilis} SCOP: c.44.1.1 PDB: 1z2d_A 1z2e_A 2ipa_B
Probab=100.00 E-value=8.9e-38 Score=254.91 Aligned_cols=127 Identities=24% Similarity=0.343 Sum_probs=106.6
Q ss_pred cEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCCC-CCCcccCCcCCCCC
Q 039294 85 FSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIEI-TSISRPIRPSDFKD 163 (253)
Q Consensus 85 ~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID~-sh~sr~Lt~~~l~~ 163 (253)
++|||||+||+|||||||+||++++. ++|+|+||||.+ + ++||+++++|+++|||+ +|++|+++.+++.+
T Consensus 4 ~~VLFVC~gN~cRSpmAEai~~~~~~-----~~~~v~SAGt~~-~---~~~p~a~~~l~~~Gid~s~~~sr~l~~~~~~~ 74 (139)
T 1jl3_A 4 KIIYFLCTGNSCRSQMAEGWAKQYLG-----DEWKVYSAGIEA-H---GLNPNAVKAMKEVGIDISNQTSDIIDSDILNN 74 (139)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHSC-----TTEEEEEEESSC-C---CCCHHHHHHHHHTTCCCTTCCCCBCCHHHHTT
T ss_pred CeEEEEcCCchHHHHHHHHHHHHhCC-----CCEEEEcCcCCC-C---CCCHHHHHHHHHcCCCcccCccCcCCHHHhhc
Confidence 58999999999999999999999973 469999999997 2 69999999999999998 59999999999999
Q ss_pred CcEEEEEeccchHHHHHHhhhhhhhccCChhhhhHHhhhhhcccCCCCCcCCCCCC---CC---HHHHHHHHHHHHHHHH
Q 039294 164 FDLILAMDKQNRQDILEAFNRWKFREQLPEEAHKKVRLMCSYCKKHDETEVPDPYY---GG---PQGFEKVLDLLEDACE 237 (253)
Q Consensus 164 aDlIItM~~~~~~~L~~~~p~~~~~~~~P~~~~~kv~ll~~f~~~~~~~dIpDP~g---~~---~e~f~~v~d~I~~~v~ 237 (253)
|||||+||+ +. .+. ||..+ +++.++ +|+|+|||+ ++ .+.|++++++|+++|+
T Consensus 75 ~D~Ii~m~~-~~---~~~---------~p~~~-~~~~~~--------~~~i~DP~~~~g~~~e~~~~f~~~~~~I~~~i~ 132 (139)
T 1jl3_A 75 ADLVVTLCG-DA---ADK---------CPMTP-PHVKRE--------HWGFDDPARAQGTEEEKWAFFQRVRDEIGNRLK 132 (139)
T ss_dssp CSEEEECSH-HH---HHH---------CCCCC-TTSEEE--------ECCCCCGGGCCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCc-hH---Hhh---------CCCCC-CCceEE--------eccCCCCcccCCChHHHHHHHHHHHHHHHHHHH
Confidence 999999975 43 222 44433 233322 489999995 33 5899999999999999
Q ss_pred HHHHH
Q 039294 238 SLLDS 242 (253)
Q Consensus 238 ~Ll~~ 242 (253)
.|+++
T Consensus 133 ~ll~~ 137 (139)
T 1jl3_A 133 EFAET 137 (139)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 99975
No 20
>3t38_A Arsenate reductase; low molecular weight tyrosine phosphatase fold, reduction of to arsenite, oxidoreductase; 2.20A {Corynebacterium glutamicum}
Probab=100.00 E-value=5.3e-38 Score=273.69 Aligned_cols=133 Identities=21% Similarity=0.360 Sum_probs=111.6
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCCC-CCCcccCCcC
Q 039294 81 TTKPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIEI-TSISRPIRPS 159 (253)
Q Consensus 81 ~~~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID~-sh~sr~Lt~~ 159 (253)
.+.+++|||||+||+|||||||+||++++. ++|+|+|||+.+ |+++||.++++|+++|||+ +|++|+++.+
T Consensus 78 ~~~~~~VLFVCtgN~cRSpmAEal~~~~~~-----~~~~v~SAGt~~---g~~~dp~a~~vl~e~Gidis~~~sr~l~~~ 149 (213)
T 3t38_A 78 ASPVPQVLFICVHNAGRSQIASALLSHYAG-----SSVEVRSAGSLP---ASEIHPLVLEILSERGVNISDAFPKPLTDD 149 (213)
T ss_dssp SSCCCEEEEEESSSSSHHHHHHHHHHHHHG-----GGCEEEEEESSC---CSSCCHHHHHHHHHTTCCCTTCCCCBCCHH
T ss_pred cCCCCEEEEECCCchhHHHHHHHHHHHhcc-----CceEEEecccCC---CCCCCHHHHHHHHHcCCCcccCcCCcCCHH
Confidence 345789999999999999999999999986 369999999975 8899999999999999998 5999999999
Q ss_pred CCCCCcEEEEEeccchHHHHHHhhhhhhhccCChhhhhHHhhhhhcccCCCCCcCCCCCCCCHHHHHHHHHHHHHHHHHH
Q 039294 160 DFKDFDLILAMDKQNRQDILEAFNRWKFREQLPEEAHKKVRLMCSYCKKHDETEVPDPYYGGPQGFEKVLDLLEDACESL 239 (253)
Q Consensus 160 ~l~~aDlIItM~~~~~~~L~~~~p~~~~~~~~P~~~~~kv~ll~~f~~~~~~~dIpDP~g~~~e~f~~v~d~I~~~v~~L 239 (253)
++.++||||+|++.+. ||..++ +. | .+|+|+||||++.+.|++++++|+++|+.|
T Consensus 150 ~~~~~DlIitMd~~~~---------------~P~~~g-k~-----~----~~w~IpDPy~~~~~~F~~v~d~Ie~~v~~L 204 (213)
T 3t38_A 150 VIRASDYVITMGCGDV---------------CPMYPG-KH-----Y----LDWELADPSDEGEDKIQEIIEEIDGRIREL 204 (213)
T ss_dssp HHHHCSEEEESSCCSC---------------SCCCSS-SE-----E----EESCC-----CCCCCHHHHHHHHHHHHHHH
T ss_pred HhccCCEEEEecCccc---------------CccccC-Cc-----c----CCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999988653 454432 21 2 369999999999999999999999999999
Q ss_pred HHHHHhh
Q 039294 240 LDSILAE 246 (253)
Q Consensus 240 l~~L~~~ 246 (253)
+++|...
T Consensus 205 l~~L~~~ 211 (213)
T 3t38_A 205 WKSIQLS 211 (213)
T ss_dssp HHHHHHH
T ss_pred HHHHhcc
Confidence 9998764
No 21
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=95.30 E-value=0.099 Score=40.07 Aligned_cols=45 Identities=11% Similarity=0.218 Sum_probs=36.1
Q ss_pred CCCCCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccC
Q 039294 80 ATTKPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTI 126 (253)
Q Consensus 80 ~~~~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~ 126 (253)
...+++|||+||...+.=|.|.+.=+++.+.+.|+. ++|...++.
T Consensus 17 ~~~~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~--~~V~~~~~~ 61 (113)
T 1tvm_A 17 FQGSKRKIIVACGGAVATSTMAAEEIKELCQSHNIP--VELIQCRVN 61 (113)
T ss_dssp CSCSSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCC--EEEEEECTT
T ss_pred hcccccEEEEECCCCHHHHHHHHHHHHHHHHHcCCe--EEEEEecHH
Confidence 555678999999999999999888888888888873 566665553
No 22
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=94.15 E-value=0.065 Score=40.83 Aligned_cols=45 Identities=13% Similarity=0.187 Sum_probs=33.6
Q ss_pred CCCCCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeecc
Q 039294 80 ATTKPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGT 125 (253)
Q Consensus 80 ~~~~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt 125 (253)
...+++|||+||.+...-|.|++.-+++.+.+.|+.+ ++|...++
T Consensus 14 ~~~~~~kIlvvC~sG~gTS~m~~~kl~~~~~~~gi~~-~~i~~~~~ 58 (110)
T 3czc_A 14 GRGSMVKVLTACGNGMGSSMVIKMKVENALRQLGVSD-IESASCSV 58 (110)
T ss_dssp ----CEEEEEECCCCHHHHHHHHHHHHHHHHHTTCCC-EEEEEECH
T ss_pred cccCCcEEEEECCCcHHHHHHHHHHHHHHHHHcCCCe-EEEEEeeH
Confidence 3445689999999999999999999999999887631 45555544
No 23
>4h3k_B RNA polymerase II subunit A C-terminal domain PHO SSU72; heat repeat, phosphatase, RNA polymerase II, hydrolase; HET: SEP; 2.00A {Homo sapiens} PDB: 3o2q_B* 4h3h_B* 3o2s_B
Probab=94.12 E-value=0.053 Score=46.35 Aligned_cols=91 Identities=25% Similarity=0.324 Sum_probs=56.3
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCC--CCCCCCH-----------HHHHHH-------
Q 039294 83 KPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYH--EGNPADS-----------RMRAAS------- 142 (253)
Q Consensus 83 ~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~--~G~pvdp-----------~Av~vL------- 142 (253)
.++|+-.||..|.=||--|..+|++. ++.|.|-||.... .|-.++. .+-+-|
T Consensus 24 ~~Lr~avVCaSN~NRSMEAH~~L~k~--------Gf~V~SfGTGs~VkLPGps~d~PnvY~FgT~Y~~iy~dL~~kd~~l 95 (214)
T 4h3k_B 24 SPLRVAVVSSSNQNRSMEAHNILSKR--------GFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQMYNDLLRKDKEL 95 (214)
T ss_dssp --CEEEEEESSSSSHHHHHHHHHHHT--------TCEEEEEECSSSEEECCSSTTCCEEECTTSCHHHHHHHHHHHHHHH
T ss_pred CCCeEEEECCCCcchhHHHHHHHHHC--------CCceEeecCCCccCCCCCCCCCCCccCCCCCHHHHHHHHHhHCHHH
Confidence 35899999999999999999998753 4799999996521 1322221 111111
Q ss_pred -HHcCCC--------CCCCcccCCcCCCCCCcEEEEEeccchHHHHHHh
Q 039294 143 -KRRGIE--------ITSISRPIRPSDFKDFDLILAMDKQNRQDILEAF 182 (253)
Q Consensus 143 -~e~GID--------~sh~sr~Lt~~~l~~aDlIItM~~~~~~~L~~~~ 182 (253)
.+.||= +.-.+.... +.-..||+|||.++.-.+.+.+.+
T Consensus 96 Y~~NGlL~MLdRN~~iK~~PER~Q-~~~~~fDvViTcEERvfD~Vvedl 143 (214)
T 4h3k_B 96 YTQNGILHMLDRNKRIKPRPERFQ-NCKDLFDLILTCEERVYDQVVEDL 143 (214)
T ss_dssp HHHTSHHHHHHHHHTTCSSCCBGG-GCCCCCSEEEESSHHHHHHHHHHH
T ss_pred HHHcCcHHHHhCCccccCCChhhh-ccCCCccEEEEccchhHHHHHHHH
Confidence 223431 111222222 122469999999999998888754
No 24
>2m1z_A LMO0427 protein; homolog PTS system IIB component, transferase; NMR {Listeria monocytogenes egd-e}
Probab=93.34 E-value=0.086 Score=40.49 Aligned_cols=65 Identities=12% Similarity=0.222 Sum_probs=53.3
Q ss_pred CcEEEEE--cCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCCcCCC
Q 039294 84 PFSVLFV--CLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIEITSISRPIRPSDF 161 (253)
Q Consensus 84 ~~~VLFV--CtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID~sh~sr~Lt~~~l 161 (253)
+|+|+-| |...+.-|-||..-+++.++++|. .+.|..-|.... --.||.+++
T Consensus 2 ~mkivaVtaCptGiAhTymAAeaLekaA~~~G~--~ikVEtqgs~g~------------------------~n~Lt~~~I 55 (106)
T 2m1z_A 2 KRKIIAVTACATGVAHTYMAAQALKKGAKKMGN--LIKVETQGATGI------------------------ENELTEKDV 55 (106)
T ss_dssp CCEEEEEEECSSCHHHHHHHHHHHHHHHHHHTC--EEEEEEEETTEE------------------------SSCCCHHHH
T ss_pred CccEEEEEECCCcHHHHHHHHHHHHHHHHHCCC--EEEEEEecCccc------------------------cCCCCHHHH
Confidence 4788888 999999999988888999999987 578887776431 136788889
Q ss_pred CCCcEEEEEeccc
Q 039294 162 KDFDLILAMDKQN 174 (253)
Q Consensus 162 ~~aDlIItM~~~~ 174 (253)
.++|+||...+..
T Consensus 56 ~~AD~VIia~d~~ 68 (106)
T 2m1z_A 56 NIGEVVIFAVDTK 68 (106)
T ss_dssp HHCSEEEEEESSC
T ss_pred hhCCEEEEecccc
Confidence 9999999998754
No 25
>2kyr_A Fructose-like phosphotransferase enzyme IIB compo; ALP protein, structural genomics, PSI-2; NMR {Escherichia coli}
Probab=90.80 E-value=0.25 Score=38.18 Aligned_cols=65 Identities=11% Similarity=0.223 Sum_probs=53.7
Q ss_pred CcEEE--EEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCCcCCC
Q 039294 84 PFSVL--FVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIEITSISRPIRPSDF 161 (253)
Q Consensus 84 ~~~VL--FVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID~sh~sr~Lt~~~l 161 (253)
+++|+ .-|...+..+-||...+++.+++.|+ .+.|+.-|.... --.||.+++
T Consensus 5 ~mkIvaVTaCptGiAHTyMAAeaL~~aA~~~G~--~ikVEtqGs~G~------------------------~n~Lt~~~I 58 (111)
T 2kyr_A 5 SKKLIALCACPMGLAHTFMAAQALEEAAVEAGY--EVKIETQGADGI------------------------QNRLTAQDI 58 (111)
T ss_dssp CCEEEEEEEESSCHHHHHHHHHHHHHHHHHTSS--EEEEEEEETTEE------------------------ESCCCHHHH
T ss_pred cccEEEEEcCCCcHHHHHHHHHHHHHHHHHCCC--eEEEEecCCCCc------------------------CCCCCHHHH
Confidence 47787 66999999999999999999999987 588888886431 246888999
Q ss_pred CCCcEEEEEeccc
Q 039294 162 KDFDLILAMDKQN 174 (253)
Q Consensus 162 ~~aDlIItM~~~~ 174 (253)
.++|+||...+..
T Consensus 59 ~~Ad~VIiA~d~~ 71 (111)
T 2kyr_A 59 AEATIIIHSVAVT 71 (111)
T ss_dssp HHCSEEEEEESSC
T ss_pred HhCCEEEEEeCCC
Confidence 9999999988754
No 26
>1vkr_A Mannitol-specific PTS system enzyme iiabc compone; phosphotransferase, transferase, kinase, sugar transport; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1vrv_A* 2few_B*
Probab=90.46 E-value=0.37 Score=37.63 Aligned_cols=34 Identities=18% Similarity=0.413 Sum_probs=29.4
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHHHHHHHhcCC
Q 039294 81 TTKPFSVLFVCLGNICRSPAAEGVFRDIVKKRGI 114 (253)
Q Consensus 81 ~~~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl 114 (253)
-.++++||+||...+.-|.|++.-+++.+.+.|+
T Consensus 10 ~~~~kkIlvVC~sGmgTS~ml~~klkk~~~e~gi 43 (125)
T 1vkr_A 10 LSHVRKIIVACDAGMGSSAMGAGVLRKKIQDAGL 43 (125)
T ss_dssp -CCCCEEEECCSSSSHHHHHHHHHHHHHHHHTTC
T ss_pred cccccEEEEECCCcHHHHHHHHHHHHHHHHHCCC
Confidence 3467899999999999999999999998888775
No 27
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=89.27 E-value=0.54 Score=35.53 Aligned_cols=41 Identities=10% Similarity=0.082 Sum_probs=33.5
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccC
Q 039294 83 KPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTI 126 (253)
Q Consensus 83 ~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~ 126 (253)
.++|||.||.+...-|-|++ =+++.++++|++ ++|...++.
T Consensus 2 ~mkkIll~Cg~G~sTS~l~~-k~~~~~~~~gi~--~~i~a~~~~ 42 (106)
T 1e2b_A 2 EKKHIYLFSSAGMSTSLLVS-KMRAQAEKYEVP--VIIEAFPET 42 (106)
T ss_dssp CCEEEEEECSSSTTTHHHHH-HHHHHHHHSCCS--EEEEEECSS
T ss_pred CCcEEEEECCCchhHHHHHH-HHHHHHHHCCCC--eEEEEecHH
Confidence 35789999999999998888 777788888884 777776664
No 28
>3p9y_A CG14216, LD40846P; phosphatase, CIS proline, LMW PTP-like fold, RNA polymerase hydrolase; HET: N7P SEP SET IMD PG4; 2.10A {Drosophila melanogaster} PDB: 3fdf_A 3fmv_A 3omx_A 3omw_A
Probab=88.78 E-value=0.51 Score=39.90 Aligned_cols=92 Identities=20% Similarity=0.257 Sum_probs=57.5
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCC--CCCCCCH-----------HHHH--------
Q 039294 82 TKPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYH--EGNPADS-----------RMRA-------- 140 (253)
Q Consensus 82 ~~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~--~G~pvdp-----------~Av~-------- 140 (253)
..++++-.||..|.=||--|..++++. ++.|.|.||.... .|-.++. .+-.
T Consensus 7 ~~~l~~avVCaSN~NRSMEaH~~L~k~--------G~~V~SfGTGs~VrLPGps~d~PNvY~FgT~Y~~iy~dL~~kd~~ 78 (198)
T 3p9y_A 7 PSKLAVAVVDSSNMNRSMEAHNFLAKK--------GFNVRSYGTGERVKLPGMAFDKPNVYEFGTKYEDIYRDLESKDKE 78 (198)
T ss_dssp TTCCEEEEEESSSSSHHHHHHHHHHHT--------TCEEEEEECSSSEEECCSSTTCCEEECTTCCHHHHHHHHHHHHHH
T ss_pred CCCceEEEEcCCCCcccHHHHHHHHhC--------CCceeecCCCceeEcCCCCCCCCCccCCCCcHHHHHHHHHHhhHH
Confidence 446899999999999999999888762 3789999997521 1322221 1111
Q ss_pred HHHHcCCC--------CCCCcccCCcCCCCCCcEEEEEeccchHHHHHHh
Q 039294 141 ASKRRGIE--------ITSISRPIRPSDFKDFDLILAMDKQNRQDILEAF 182 (253)
Q Consensus 141 vL~e~GID--------~sh~sr~Lt~~~l~~aDlIItM~~~~~~~L~~~~ 182 (253)
.-.+.||= +.-.|..... --..||+|||.++.-.+.+.+.+
T Consensus 79 lY~~NGiL~MLdRNr~iK~~PERfQ~-~~~~fDvIiTcEERvfD~VvedL 127 (198)
T 3p9y_A 79 FYTQNGLLHMLDRNRRIKKCPERFQD-TKEQFDIIVTVEERVYDLVVMHM 127 (198)
T ss_dssp HHHHTSHHHHHHHHHHHCSSCCBGGG-CCCCCSEEEESSHHHHHHHHHHH
T ss_pred HHHHcCcHHHHhcCccccCCccchhc-cCCCcCEEEEeechhHHHHHHHH
Confidence 12233431 1112222211 12469999999999888888765
No 29
>2r48_A Phosphotransferase system (PTS) mannose-specific iibca component; PTS system, fructose specific IIB PFAM02379, PSI-2, MCSG; 1.80A {Bacillus subtilis subsp} SCOP: c.44.2.2
Probab=88.53 E-value=0.46 Score=36.39 Aligned_cols=64 Identities=14% Similarity=0.358 Sum_probs=51.3
Q ss_pred cEEEEE--cCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCCcCCCC
Q 039294 85 FSVLFV--CLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIEITSISRPIRPSDFK 162 (253)
Q Consensus 85 ~~VLFV--CtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID~sh~sr~Lt~~~l~ 162 (253)
++|+.| |...+..+-||...|++.+++.|+ .+.|+.-|.... --.||.+++.
T Consensus 3 ~kivaVTaCptGiAhTymAaeaL~~aA~~~G~--~ikVEtqGs~G~------------------------~n~Lt~~~I~ 56 (106)
T 2r48_A 3 AKLLAITSCPNGIAHTYMAAENLQKAADRLGV--SIKVETQGGIGV------------------------ENKLTEEEIR 56 (106)
T ss_dssp CEEEEEEECSSCSHHHHHHHHHHHHHHHHHTC--EEEEEEEETTEE------------------------ESCCCHHHHH
T ss_pred ceEEEEecCCCcHHHHHHHHHHHHHHHHHCCC--eEEEEecCCCCc------------------------cCCCCHHHHH
Confidence 466655 788899999999999999999987 588887776431 1468888999
Q ss_pred CCcEEEEEeccc
Q 039294 163 DFDLILAMDKQN 174 (253)
Q Consensus 163 ~aDlIItM~~~~ 174 (253)
++|+||...+..
T Consensus 57 ~Ad~VIiA~d~~ 68 (106)
T 2r48_A 57 EADAIIIAADRS 68 (106)
T ss_dssp HCSEEEEEESSC
T ss_pred hCCEEEEEeCCc
Confidence 999999998854
No 30
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=83.99 E-value=2.1 Score=38.00 Aligned_cols=70 Identities=10% Similarity=0.008 Sum_probs=42.6
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCCC--CCCcccCCcC
Q 039294 82 TKPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIEI--TSISRPIRPS 159 (253)
Q Consensus 82 ~~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID~--sh~sr~Lt~~ 159 (253)
..+++|+||..|.+..|.+|+.+.+ +|. .+.+.= ... .+...+.|++.||++ +|.+..+..
T Consensus 2 ~~~~~i~~iGiGg~Gms~~A~~L~~-----~G~--~V~~~D--~~~-------~~~~~~~L~~~gi~v~~g~~~~~l~~- 64 (326)
T 3eag_A 2 NAMKHIHIIGIGGTFMGGLAAIAKE-----AGF--EVSGCD--AKM-------YPPMSTQLEALGIDVYEGFDAAQLDE- 64 (326)
T ss_dssp -CCCEEEEESCCSHHHHHHHHHHHH-----TTC--EEEEEE--SSC-------CTTHHHHHHHTTCEEEESCCGGGGGS-
T ss_pred CCCcEEEEEEECHHHHHHHHHHHHh-----CCC--EEEEEc--CCC-------CcHHHHHHHhCCCEEECCCCHHHcCC-
Confidence 3568999999999999999975443 232 233221 111 122466788889984 455433310
Q ss_pred CCCCCcEEEEE
Q 039294 160 DFKDFDLILAM 170 (253)
Q Consensus 160 ~l~~aDlIItM 170 (253)
.++|+||..
T Consensus 65 --~~~d~vV~S 73 (326)
T 3eag_A 65 --FKADVYVIG 73 (326)
T ss_dssp --CCCSEEEEC
T ss_pred --CCCCEEEEC
Confidence 358888864
No 31
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=83.18 E-value=1.1 Score=33.68 Aligned_cols=39 Identities=18% Similarity=0.341 Sum_probs=30.5
Q ss_pred cEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccC
Q 039294 85 FSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTI 126 (253)
Q Consensus 85 ~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~ 126 (253)
+|||+||.+.+.-| |...=+++.+.+.|+. ++|...++.
T Consensus 5 mkIlvvC~~G~~TS-ll~~kl~~~~~~~gi~--~~i~~~~~~ 43 (109)
T 2l2q_A 5 MNILLVCGAGMSTS-MLVQRIEKYAKSKNIN--ATIEAIAET 43 (109)
T ss_dssp EEEEEESSSSCSSC-HHHHHHHHHHHHHTCS--EEEEEECST
T ss_pred eEEEEECCChHhHH-HHHHHHHHHHHHCCCC--eEEEEecHH
Confidence 78999999999999 5556777888888873 666666653
No 32
>2r4q_A Phosphotransferase system (PTS) fructose-specific iiabc component; fructose specific IIB subunit, PF structural genomics, PSI-2; HET: MSE; 1.60A {Bacillus subtilis subsp} SCOP: c.44.2.2
Probab=75.97 E-value=2.2 Score=32.48 Aligned_cols=64 Identities=16% Similarity=0.363 Sum_probs=48.8
Q ss_pred cEEEEE--cCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCCcCCCC
Q 039294 85 FSVLFV--CLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIEITSISRPIRPSDFK 162 (253)
Q Consensus 85 ~~VLFV--CtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID~sh~sr~Lt~~~l~ 162 (253)
|+|+.| |...+..+-||...|++.+++.|+ .+.|+.-|.... --.||.+++.
T Consensus 3 ~kivaVTaCptGiAhTymAaeaL~~aA~~~G~--~ikVEtqGs~G~------------------------~n~Lt~~~I~ 56 (106)
T 2r4q_A 3 AKILAVTACPTGIAHTFMAADALKEKAKELGV--EIKVETNGSSGI------------------------KHKLTAQEIE 56 (106)
T ss_dssp CCEEEEEECSCC--CHHHHHHHHHHHHHHHTC--CEEEEEEETTEE------------------------ESCCCHHHHH
T ss_pred ceEEEEecCCCcHHHHHHHHHHHHHHHHHCCC--eEEEEecCCCCc------------------------cCCCCHHHHH
Confidence 455554 788899999999999999999997 588887775431 1468888999
Q ss_pred CCcEEEEEeccc
Q 039294 163 DFDLILAMDKQN 174 (253)
Q Consensus 163 ~aDlIItM~~~~ 174 (253)
++|+||...+..
T Consensus 57 ~Ad~VIiA~d~~ 68 (106)
T 2r4q_A 57 DAPAIIVAADKQ 68 (106)
T ss_dssp HCSCEEEEESSC
T ss_pred hCCEEEEEeCCc
Confidence 999999998754
No 33
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=70.68 E-value=6.6 Score=29.67 Aligned_cols=41 Identities=17% Similarity=0.297 Sum_probs=29.4
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeec
Q 039294 81 TTKPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAG 124 (253)
Q Consensus 81 ~~~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAG 124 (253)
..+++|||.+|.+..--|-++..+ ++.++++|++ +++.+.+
T Consensus 3 ~~~~mkIlL~C~aGmSTsllv~km-~~~a~~~gi~--v~i~a~~ 43 (108)
T 3nbm_A 3 ASKELKVLVLCAGSGTSAQLANAI-NEGANLTEVR--VIANSGA 43 (108)
T ss_dssp --CCEEEEEEESSSSHHHHHHHHH-HHHHHHHTCS--EEEEEEE
T ss_pred cccCceEEEECCCCCCHHHHHHHH-HHHHHHCCCc--eEEEEcc
Confidence 356789999999999999988755 4556777763 6665544
No 34
>3sqn_A Conserved domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, MGA family; 2.31A {Enterococcus faecalis}
Probab=69.80 E-value=8.6 Score=36.26 Aligned_cols=60 Identities=7% Similarity=0.092 Sum_probs=43.2
Q ss_pred CCCCCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCCcC
Q 039294 80 ATTKPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIEITSISRPIRPS 159 (253)
Q Consensus 80 ~~~~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID~sh~sr~Lt~~ 159 (253)
....++++++||.|.++=|.|=+.=++.+... .+ .-.++.. +.+...
T Consensus 394 ~~~~~~~~~vVC~~GigtS~lL~~~L~~~F~~-----~~--~~~~is~--------------------------~e~~~~ 440 (485)
T 3sqn_A 394 IQAQTMTAYFLFQGEPAWKAFLQQELAAYLGT-----RV--KLQAIEY--------------------------VELSQL 440 (485)
T ss_dssp TCCCSEEEEEECCSCHHHHHHHHHHHHHHHCT-----TE--EEEECCT--------------------------TTCCCC
T ss_pred cccccceEEEECCCchhHHHHHHHHHHHhcCC-----ce--EeecccH--------------------------HHHhhc
Confidence 34567899999999999999999999988853 22 3334422 334444
Q ss_pred CCCCCcEEEEEec
Q 039294 160 DFKDFDLILAMDK 172 (253)
Q Consensus 160 ~l~~aDlIItM~~ 172 (253)
++.++|+||+.-.
T Consensus 441 ~~~~~D~ViStvp 453 (485)
T 3sqn_A 441 TLNEADIIISNFP 453 (485)
T ss_dssp CCCTTCEEEESSC
T ss_pred cccCCCEEEEccc
Confidence 5568999998865
No 35
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=69.11 E-value=7 Score=27.07 Aligned_cols=39 Identities=18% Similarity=0.220 Sum_probs=28.9
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCC
Q 039294 84 PFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYH 129 (253)
Q Consensus 84 ~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~ 129 (253)
...|+|+|.+. -||..|..+|+. .|+. ++.+. +|+..|.
T Consensus 41 ~~~ivv~C~~g-~rs~~aa~~L~~----~G~~-~v~~l-GG~~~w~ 79 (85)
T 2jtq_A 41 NDTVKVYCNAG-RQSGQAKEILSE----MGYT-HVENA-GGLKDIA 79 (85)
T ss_dssp TSEEEEEESSS-HHHHHHHHHHHH----TTCS-SEEEE-EETTTCC
T ss_pred CCcEEEEcCCC-chHHHHHHHHHH----cCCC-CEEec-cCHHHHh
Confidence 36799999875 499888877765 3653 57777 9988773
No 36
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=67.25 E-value=5.9 Score=34.95 Aligned_cols=68 Identities=16% Similarity=0.302 Sum_probs=45.4
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCCcCCCC
Q 039294 83 KPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIEITSISRPIRPSDFK 162 (253)
Q Consensus 83 ~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID~sh~sr~Lt~~~l~ 162 (253)
.|+||-||-.||..+ |||..|+++ |. .+.| |+ .++...+.+.+.|......+. +..+
T Consensus 2 ~M~kIgfIGlG~MG~-~mA~~L~~~-----G~--~v~v-------~d----r~~~~~~~l~~~Ga~~a~s~~----e~~~ 58 (300)
T 3obb_A 2 HMKQIAFIGLGHMGA-PMATNLLKA-----GY--LLNV-------FD----LVQSAVDGLVAAGASAARSAR----DAVQ 58 (300)
T ss_dssp -CCEEEEECCSTTHH-HHHHHHHHT-----TC--EEEE-------EC----SSHHHHHHHHHTTCEECSSHH----HHHT
T ss_pred CcCEEEEeeehHHHH-HHHHHHHhC-----CC--eEEE-------Ec----CCHHHHHHHHHcCCEEcCCHH----HHHh
Confidence 467999999999985 888877652 32 2322 22 567888888888876432222 2356
Q ss_pred CCcEEEEEecc
Q 039294 163 DFDLILAMDKQ 173 (253)
Q Consensus 163 ~aDlIItM~~~ 173 (253)
.+|+||+|=..
T Consensus 59 ~~dvv~~~l~~ 69 (300)
T 3obb_A 59 GADVVISMLPA 69 (300)
T ss_dssp TCSEEEECCSC
T ss_pred cCCceeecCCc
Confidence 78999988643
No 37
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=66.54 E-value=8.7 Score=32.78 Aligned_cols=91 Identities=16% Similarity=0.175 Sum_probs=54.0
Q ss_pred CCCCCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCCCC-CCcccCCc
Q 039294 80 ATTKPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIEIT-SISRPIRP 158 (253)
Q Consensus 80 ~~~~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID~s-h~sr~Lt~ 158 (253)
....|+||+|+..|+- ..++++++.+.... + .++| .++.. ++.+..+.+.++++||+.- ..++.+..
T Consensus 18 ~~~~~~rI~~l~SG~g---~~~~~~l~~l~~~~-~--~~~I--~~Vvt----~~~~~~~~~~A~~~gIp~~~~~~~~~~~ 85 (229)
T 3auf_A 18 FQGHMIRIGVLISGSG---TNLQAILDGCREGR-I--PGRV--AVVIS----DRADAYGLERARRAGVDALHMDPAAYPS 85 (229)
T ss_dssp CBTTCEEEEEEESSCC---HHHHHHHHHHHTTS-S--SEEE--EEEEE----SSTTCHHHHHHHHTTCEEEECCGGGSSS
T ss_pred ccCCCcEEEEEEeCCc---HHHHHHHHHHHhCC-C--CCeE--EEEEc----CCCchHHHHHHHHcCCCEEEECcccccc
Confidence 3445689999988874 57888998876531 1 2333 23321 1245567888899999952 23333321
Q ss_pred ------C---CC--CCCcEEEEEeccc--hHHHHHHh
Q 039294 159 ------S---DF--KDFDLILAMDKQN--RQDILEAF 182 (253)
Q Consensus 159 ------~---~l--~~aDlIItM~~~~--~~~L~~~~ 182 (253)
+ .+ .+.|+||+..-.. -..+++.+
T Consensus 86 r~~~~~~~~~~l~~~~~Dliv~agy~~IL~~~~l~~~ 122 (229)
T 3auf_A 86 RTAFDAALAERLQAYGVDLVCLAGYMRLVRGPMLTAF 122 (229)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEESSCCSCCCHHHHHHS
T ss_pred hhhccHHHHHHHHhcCCCEEEEcChhHhCCHHHHhhc
Confidence 1 11 3689999987643 24555554
No 38
>3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A*
Probab=65.88 E-value=1.1 Score=36.40 Aligned_cols=44 Identities=16% Similarity=0.335 Sum_probs=32.1
Q ss_pred cEEEEEcCCCchHHHHHHHHHHHHHHhcCCC-CcEEEEeeccCCC
Q 039294 85 FSVLFVCLGNICRSPAAEGVFRDIVKKRGID-SKFNIDSAGTIDY 128 (253)
Q Consensus 85 ~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~-~~i~V~SAGt~~~ 128 (253)
..|+|+|.....||+.|..++...+.+.|+. .++.+..+|+..|
T Consensus 105 ~~IVvyC~sG~~Rs~~aa~~l~~~L~~~G~~~~~V~~L~GG~~aW 149 (169)
T 3f4a_A 105 LNVIFHCMLSQQRGPSAAMLLLRSLDTAELSRCRLWVLRGGFSRW 149 (169)
T ss_dssp EEEEEECSSSSSHHHHHHHHHHHTCCHHHHTTEEEEEETTHHHHH
T ss_pred CeEEEEeCCCCCcHHHHHHHHHHHHHHcCCCCCCEEEECCCHHHH
Confidence 6799999987899999987776654444421 2577778888765
No 39
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=64.88 E-value=18 Score=30.63 Aligned_cols=73 Identities=14% Similarity=0.220 Sum_probs=48.7
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCCcCCCC
Q 039294 83 KPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIEITSISRPIRPSDFK 162 (253)
Q Consensus 83 ~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID~sh~sr~Lt~~~l~ 162 (253)
+.++||+|-.| .+|+.-++.++.. | ..+.|.+- ..++...+..++.+|. ...+...++++.
T Consensus 30 ~gk~VLVVGgG-----~va~~ka~~Ll~~-G--A~VtVvap---------~~~~~l~~l~~~~~i~--~i~~~~~~~dL~ 90 (223)
T 3dfz_A 30 KGRSVLVVGGG-----TIATRRIKGFLQE-G--AAITVVAP---------TVSAEINEWEAKGQLR--VKRKKVGEEDLL 90 (223)
T ss_dssp TTCCEEEECCS-----HHHHHHHHHHGGG-C--CCEEEECS---------SCCHHHHHHHHTTSCE--EECSCCCGGGSS
T ss_pred CCCEEEEECCC-----HHHHHHHHHHHHC-C--CEEEEECC---------CCCHHHHHHHHcCCcE--EEECCCCHhHhC
Confidence 34689999888 5677777777653 3 36777652 1455555555544554 234566778899
Q ss_pred CCcEEEEEeccc
Q 039294 163 DFDLILAMDKQN 174 (253)
Q Consensus 163 ~aDlIItM~~~~ 174 (253)
.+|+||+-++..
T Consensus 91 ~adLVIaAT~d~ 102 (223)
T 3dfz_A 91 NVFFIVVATNDQ 102 (223)
T ss_dssp SCSEEEECCCCT
T ss_pred CCCEEEECCCCH
Confidence 999999988653
No 40
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=64.07 E-value=13 Score=31.12 Aligned_cols=79 Identities=10% Similarity=0.128 Sum_probs=47.3
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCCC-CCCcccCCc----
Q 039294 84 PFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIEI-TSISRPIRP---- 158 (253)
Q Consensus 84 ~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID~-sh~sr~Lt~---- 158 (253)
|+||+|+..|+- ..++++++.+... + +.+.-.++.. ++.++.+.+.++++||+. ...++.+..
T Consensus 1 m~rI~vl~SG~g---~~~~~~l~~l~~~-~----~~~~i~~Vvs----~~~~~~~~~~A~~~gIp~~~~~~~~~~~r~~~ 68 (216)
T 2ywr_A 1 MLKIGVLVSGRG---SNLQAIIDAIESG-K----VNASIELVIS----DNPKAYAIERCKKHNVECKVIQRKEFPSKKEF 68 (216)
T ss_dssp CEEEEEEECSCC---HHHHHHHHHHHTT-S----SCEEEEEEEE----SCTTCHHHHHHHHHTCCEEECCGGGSSSHHHH
T ss_pred CCEEEEEEeCCc---HHHHHHHHHHHhC-C----CCCeEEEEEe----CCCChHHHHHHHHcCCCEEEeCcccccchhhh
Confidence 478999977765 4688888887652 2 2122233332 134556788889999994 223333321
Q ss_pred --C---CC--CCCcEEEEEeccc
Q 039294 159 --S---DF--KDFDLILAMDKQN 174 (253)
Q Consensus 159 --~---~l--~~aDlIItM~~~~ 174 (253)
+ .+ .+.|+||+..-..
T Consensus 69 ~~~~~~~l~~~~~Dliv~a~y~~ 91 (216)
T 2ywr_A 69 EERMALELKKKGVELVVLAGFMR 91 (216)
T ss_dssp HHHHHHHHHHTTCCEEEESSCCS
T ss_pred hHHHHHHHHhcCCCEEEEeCchh
Confidence 1 11 3689999887643
No 41
>2auv_A Potential NAD-reducing hydrogenase subunit; thioredoxin, thiordoxin-like, oxidoreductase; NMR {Desulfovibrio fructosovorans}
Probab=63.64 E-value=2.2 Score=30.44 Aligned_cols=28 Identities=21% Similarity=0.380 Sum_probs=23.6
Q ss_pred cEEEEEcCCCchHHHHHHHHHHHHHHhc
Q 039294 85 FSVLFVCLGNICRSPAAEGVFRDIVKKR 112 (253)
Q Consensus 85 ~~VLFVCtgNiCRSpMAEal~r~~~~~~ 112 (253)
...+|||+|..|.+.=|+.+++++-++.
T Consensus 6 ~~~I~VC~g~~C~~~Ga~~v~~~l~~~l 33 (85)
T 2auv_A 6 KYPISVCMGTACFVKGADKVVHAFKEQL 33 (85)
T ss_dssp SBCEECCCCHHHHTTTHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHcCHHHHHHHHHHHh
Confidence 4589999999999998999988876653
No 42
>1cfz_A Hydrogenase 2 maturation protease; metzincins, nickel; 2.20A {Escherichia coli} SCOP: c.56.1.1 PDB: 2kml_A
Probab=62.16 E-value=7.4 Score=31.24 Aligned_cols=43 Identities=16% Similarity=0.254 Sum_probs=30.5
Q ss_pred cEEEEEcCCCchHH--HHHHHHHHHHHHhcCCCCcEEEEeeccCC
Q 039294 85 FSVLFVCLGNICRS--PAAEGVFRDIVKKRGIDSKFNIDSAGTID 127 (253)
Q Consensus 85 ~~VLFVCtgNiCRS--pMAEal~r~~~~~~gl~~~i~V~SAGt~~ 127 (253)
||||++|.||.-|. -..=.+.+.+.+...++.+|++.-+|+.+
T Consensus 1 m~ilVlGiGN~l~gDDG~G~~v~~~L~~~~~~p~~v~vid~gt~~ 45 (162)
T 1cfz_A 1 MRILVLGVGNILLTDEAIGVRIVEALEQRYILPDYVEILDGGTAG 45 (162)
T ss_dssp CCEEEEEESCTTBGGGGHHHHHHHHHHHHEECCTTEEEEEEETCC
T ss_pred CCEEEEEECCcccccccHHHHHHHHHHhhCCCCCCeEEEECCCCH
Confidence 47999999999887 33334444444333556689999999875
No 43
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=62.14 E-value=11 Score=26.59 Aligned_cols=38 Identities=18% Similarity=0.093 Sum_probs=28.9
Q ss_pred cEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCC
Q 039294 85 FSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYH 129 (253)
Q Consensus 85 ~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~ 129 (253)
..|+|+|.+. .||..|..+|+.+ |+ . +.+..+|+..|.
T Consensus 54 ~~ivvyC~~g-~rs~~a~~~L~~~----G~-~-v~~l~GG~~~W~ 91 (94)
T 1wv9_A 54 RPLLLVCEKG-LLSQVAALYLEAE----GY-E-AMSLEGGLQALT 91 (94)
T ss_dssp SCEEEECSSS-HHHHHHHHHHHHH----TC-C-EEEETTGGGCC-
T ss_pred CCEEEEcCCC-ChHHHHHHHHHHc----CC-c-EEEEcccHHHHH
Confidence 6799999876 4999988887764 55 3 777889988774
No 44
>1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} SCOP: c.127.1.1 PDB: 1u6i_A 1u6j_A 1u6k_A* 3iqe_A* 3iqf_A* 3iqz_A*
Probab=60.35 E-value=4.6 Score=35.38 Aligned_cols=51 Identities=16% Similarity=0.206 Sum_probs=39.7
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHH
Q 039294 83 KPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAAS 142 (253)
Q Consensus 83 ~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL 142 (253)
.+.||-||=.||+.-|+|.+-++...+.+ .++++...|+.+ .+.|.-++..
T Consensus 2 mvvKiGiiKlGNigts~~idl~LDErAdR----edI~vrv~gsGa-----Km~pe~~~~~ 52 (283)
T 1qv9_A 2 TVAKAIFIKCGNLGTSMMMDMLLDERADR----EDVEFRVVGTSV-----KMDPECVEAA 52 (283)
T ss_dssp CCEEEEEEECSCCHHHHHTTGGGSTTSCC----SSEEEEEEECTT-----CCSHHHHHHH
T ss_pred eeEEEEEEEecccchHHHHHHHHHhhhcc----CCceEEEeccCC-----CCCHHHHHHH
Confidence 35799999999999999999998877653 368999988754 4666655443
No 45
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=60.07 E-value=17 Score=34.46 Aligned_cols=68 Identities=10% Similarity=0.071 Sum_probs=40.0
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCCC--CCCcccCCcC
Q 039294 82 TKPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIEI--TSISRPIRPS 159 (253)
Q Consensus 82 ~~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID~--sh~sr~Lt~~ 159 (253)
.+.++|.||-.|.+..|.+|+.+.+ +| ++|.=.-... .+...+.|++.||.+ +|.+..+
T Consensus 17 ~~~~~i~~iGiGg~Gms~lA~~l~~-----~G----~~V~~sD~~~-------~~~~~~~L~~~gi~~~~G~~~~~~--- 77 (524)
T 3hn7_A 17 FQGMHIHILGICGTFMGSLALLARA-----LG----HTVTGSDANI-------YPPMSTQLEQAGVTIEEGYLIAHL--- 77 (524)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHH-----TT----CEEEEEESCC-------CTTHHHHHHHTTCEEEESCCGGGG---
T ss_pred ecCCEEEEEEecHhhHHHHHHHHHh-----CC----CEEEEECCCC-------CcHHHHHHHHCCCEEECCCCHHHc---
Confidence 3457899999999999999975543 23 2332111111 122566788888874 4544333
Q ss_pred CCCCCcEEEE
Q 039294 160 DFKDFDLILA 169 (253)
Q Consensus 160 ~l~~aDlIIt 169 (253)
..++|+||.
T Consensus 78 -~~~~d~vV~ 86 (524)
T 3hn7_A 78 -QPAPDLVVV 86 (524)
T ss_dssp -CSCCSEEEE
T ss_pred -CCCCCEEEE
Confidence 235787775
No 46
>1m2d_A [2Fe-2S] ferredoxin; thioredoxin-like fold, [2Fe-2S] cluster, Cys59Ser variant, electron transport; 1.05A {Aquifex aeolicus} SCOP: c.47.1.11 PDB: 1m2a_A 1f37_A 1m2b_A
Probab=55.95 E-value=10 Score=28.27 Aligned_cols=43 Identities=21% Similarity=0.483 Sum_probs=30.2
Q ss_pred cEEEEEcCC--------CchHHHHHHHHHHHHHH---hc-CCCCcEEEEeeccCC
Q 039294 85 FSVLFVCLG--------NICRSPAAEGVFRDIVK---KR-GIDSKFNIDSAGTID 127 (253)
Q Consensus 85 ~~VLFVCtg--------NiCRSpMAEal~r~~~~---~~-gl~~~i~V~SAGt~~ 127 (253)
.+.+|||+| -.|.+.=|+.++.++-+ .+ |+.+.|.+...|-..
T Consensus 3 ~~~I~VC~~~r~~~~~~~~C~~~Ga~~l~~~l~~~l~~~~g~~~~v~v~~~~ClG 57 (110)
T 1m2d_A 3 FKHVFVCVQDRPPGHPQGSCAQRGSREVFQAFMEKIQTDPQLFMTTVITPTGCMN 57 (110)
T ss_dssp CEEEEEECCCCCTTCTTCCTGGGTHHHHHHHHHHHHHHCHHHHTTEEEEEESCCS
T ss_pred ceEEEECCCCCCCCCCCCCchhcCHHHHHHHHHHHHHHhcCCCCeEEEEECCCCC
Confidence 468999999 68987767777666544 23 443568888887653
No 47
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=55.78 E-value=30 Score=32.41 Aligned_cols=66 Identities=18% Similarity=0.262 Sum_probs=39.5
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCCC--CCCcccCCcCC
Q 039294 83 KPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIEI--TSISRPIRPSD 160 (253)
Q Consensus 83 ~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID~--sh~sr~Lt~~~ 160 (253)
..++|+||-.|.+..|.+|+.+.+. | ++|. |... . ..+ ..+.|++.||++ +|.+. .
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~~-----G----~~V~--~~D~---~--~~~-~~~~l~~~gi~~~~g~~~~-----~ 78 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLANE-----G----YQIS--GSDL---A--PNS-VTQHLTALGAQIYFHHRPE-----N 78 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHHT-----T----CEEE--EECS---S--CCH-HHHHHHHTTCEEESSCCGG-----G
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHhC-----C----CeEE--EEEC---C--CCH-HHHHHHHCCCEEECCCCHH-----H
Confidence 3578999999999999988755432 3 2332 2211 1 122 345677888874 45443 2
Q ss_pred CCCCcEEEEE
Q 039294 161 FKDFDLILAM 170 (253)
Q Consensus 161 l~~aDlIItM 170 (253)
+..+|+||.-
T Consensus 79 ~~~~d~vV~S 88 (494)
T 4hv4_A 79 VLDASVVVVS 88 (494)
T ss_dssp GTTCSEEEEC
T ss_pred cCCCCEEEEC
Confidence 3457877753
No 48
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}
Probab=55.53 E-value=16 Score=26.73 Aligned_cols=39 Identities=18% Similarity=0.237 Sum_probs=29.3
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCC
Q 039294 84 PFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYH 129 (253)
Q Consensus 84 ~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~ 129 (253)
...|+|+|.+. -||..|..+|+. .|+. . .+..+|+..|.
T Consensus 56 ~~~ivvyC~~G-~rs~~aa~~L~~----~G~~-~-~~l~GG~~~W~ 94 (110)
T 2k0z_A 56 DKKVLLHCRAG-RRALDAAKSMHE----LGYT-P-YYLEGNVYDFE 94 (110)
T ss_dssp SSCEEEECSSS-HHHHHHHHHHHH----TTCC-C-EEEESCGGGTT
T ss_pred CCEEEEEeCCC-chHHHHHHHHHH----CCCC-E-EEecCCHHHHH
Confidence 35699999776 599888877765 4654 4 77889998874
No 49
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=54.60 E-value=7.5 Score=27.89 Aligned_cols=39 Identities=13% Similarity=0.210 Sum_probs=29.0
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCC
Q 039294 84 PFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYH 129 (253)
Q Consensus 84 ~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~ 129 (253)
...|+|+|.+. -||..|..+|+. .|+ ++.+..+|+..|.
T Consensus 56 ~~~ivvyC~~g-~rs~~a~~~L~~----~G~--~v~~l~GG~~~W~ 94 (100)
T 3foj_A 56 NETYYIICKAG-GRSAQVVQYLEQ----NGV--NAVNVEGGMDEFG 94 (100)
T ss_dssp TSEEEEECSSS-HHHHHHHHHHHT----TTC--EEEEETTHHHHHC
T ss_pred CCcEEEEcCCC-chHHHHHHHHHH----CCC--CEEEecccHHHHH
Confidence 36899999765 789988877754 455 5777788887664
No 50
>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3
Probab=53.99 E-value=5.2 Score=30.79 Aligned_cols=39 Identities=18% Similarity=0.308 Sum_probs=29.3
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCC
Q 039294 84 PFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDY 128 (253)
Q Consensus 84 ~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~ 128 (253)
...|+|+|.+.. ||..|..+|+.+ |+ .++.+..+|+..|
T Consensus 82 ~~~ivvyC~~G~-rS~~aa~~L~~~----G~-~~v~~l~GG~~~W 120 (137)
T 1qxn_A 82 EKPVVVFCKTAA-RAALAGKTLREY----GF-KTIYNSEGGMDKW 120 (137)
T ss_dssp TSCEEEECCSSS-CHHHHHHHHHHH----TC-SCEEEESSCHHHH
T ss_pred CCeEEEEcCCCc-HHHHHHHHHHHc----CC-cceEEEcCcHHHH
Confidence 357999998765 999998888654 54 3577888888665
No 51
>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A
Probab=53.48 E-value=6.3 Score=30.66 Aligned_cols=40 Identities=20% Similarity=0.352 Sum_probs=30.4
Q ss_pred CCcEEEEEcCCCch-HHHHHHHHHHHHHHhcCCCCcEEEEeeccCCC
Q 039294 83 KPFSVLFVCLGNIC-RSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDY 128 (253)
Q Consensus 83 ~~~~VLFVCtgNiC-RSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~ 128 (253)
+...|+|+|.+..| ||..|..+|+. .|+ ++.+..+|+..|
T Consensus 71 ~~~~ivvyC~~g~~~rs~~aa~~L~~----~G~--~v~~l~GG~~~W 111 (144)
T 3nhv_A 71 KEKVIITYCWGPACNGATKAAAKFAQ----LGF--RVKELIGGIEYW 111 (144)
T ss_dssp TTSEEEEECSCTTCCHHHHHHHHHHH----TTC--EEEEEESHHHHH
T ss_pred CCCeEEEEECCCCccHHHHHHHHHHH----CCC--eEEEeCCcHHHH
Confidence 34679999999886 99998887765 455 477778887654
No 52
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=50.01 E-value=10 Score=27.29 Aligned_cols=39 Identities=21% Similarity=0.235 Sum_probs=28.9
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCC
Q 039294 84 PFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYH 129 (253)
Q Consensus 84 ~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~ 129 (253)
...|+|+|.+. -||..|..+|+. .|+ ++.+..+|+..|.
T Consensus 56 ~~~iv~yC~~g-~rs~~a~~~L~~----~G~--~v~~l~GG~~~W~ 94 (103)
T 3eme_A 56 NEIYYIVCAGG-VRSAKVVEYLEA----NGI--DAVNVEGGMHAWG 94 (103)
T ss_dssp TSEEEEECSSS-SHHHHHHHHHHT----TTC--EEEEETTHHHHHC
T ss_pred CCeEEEECCCC-hHHHHHHHHHHH----CCC--CeEEeCCCHHHHH
Confidence 46799999766 689888877754 455 5777788887763
No 53
>2j6p_A SB(V)-AS(V) reductase; arsenate reductase, antimonate reductase, CDC25 phosphatase, rhodanese, C-MYC epitope, oxidoreductase; HET: EPE; 2.15A {Leishmania major}
Probab=50.01 E-value=12 Score=29.10 Aligned_cols=44 Identities=20% Similarity=0.277 Sum_probs=28.8
Q ss_pred cEEEEEcCCCchHHHHHHHHHHHHHHhcCCC-CcEEEEeeccCCC
Q 039294 85 FSVLFVCLGNICRSPAAEGVFRDIVKKRGID-SKFNIDSAGTIDY 128 (253)
Q Consensus 85 ~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~-~~i~V~SAGt~~~ 128 (253)
..|+|.|...--||+.|...+...+.+.|+. .++.+..+|+..|
T Consensus 69 ~~vV~yC~~sg~rs~~aa~~~~~~L~~~G~~~~~v~~L~GG~~~W 113 (152)
T 2j6p_A 69 ELAVFHCAQSLVRAPKGANRFALAQKKLGYVLPAVYVLRGGWEAF 113 (152)
T ss_dssp CEEEEECSSSSSHHHHHHHHHHHHHHHHTCCCSEEEEETTHHHHH
T ss_pred CEEEEEcCCCCCccHHHHHHHHHHHHHcCCCCCCEEEEcCcHHHH
Confidence 4577779544459998874554455556752 3577778887665
No 54
>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3
Probab=49.95 E-value=11 Score=28.43 Aligned_cols=39 Identities=15% Similarity=0.150 Sum_probs=29.0
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCC
Q 039294 84 PFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDY 128 (253)
Q Consensus 84 ~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~ 128 (253)
...|+|+|.+. -||..|..+|+.+ |+ .++.+..+|+..|
T Consensus 82 ~~~ivvyC~~G-~rs~~aa~~L~~~----G~-~~v~~l~GG~~~W 120 (129)
T 1tq1_A 82 SDNIIVGCQSG-GRSIKATTDLLHA----GF-TGVKDIVGGYSAW 120 (129)
T ss_dssp TSSEEEEESSC-SHHHHHHHHHHHH----HC-CSEEEEECCHHHH
T ss_pred CCeEEEECCCC-cHHHHHHHHHHHc----CC-CCeEEeCCcHHHH
Confidence 35699999865 4999998888765 33 3577788887655
No 55
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=49.91 E-value=22 Score=31.49 Aligned_cols=75 Identities=15% Similarity=0.136 Sum_probs=42.8
Q ss_pred CCCCCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCC-HHHHHHHHHcCCCCC-CCcccCC
Q 039294 80 ATTKPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPAD-SRMRAASKRRGIEIT-SISRPIR 157 (253)
Q Consensus 80 ~~~~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvd-p~Av~vL~e~GID~s-h~sr~Lt 157 (253)
..++++||.||-.|++.+-.++.++.+. .++++.. +.. .+ ..+.+..++.|+..- ....-+.
T Consensus 23 ~~m~~~rigiIG~G~~g~~~~~~~l~~~--------~~~~l~a--v~d------~~~~~~~~~a~~~g~~~~~~~~~ll~ 86 (350)
T 3rc1_A 23 ANANPIRVGVIGCADIAWRRALPALEAE--------PLTEVTA--IAS------RRWDRAKRFTERFGGEPVEGYPALLE 86 (350)
T ss_dssp ---CCEEEEEESCCHHHHHTHHHHHHHC--------TTEEEEE--EEE------SSHHHHHHHHHHHCSEEEESHHHHHT
T ss_pred CCCCceEEEEEcCcHHHHHHHHHHHHhC--------CCeEEEE--EEc------CCHHHHHHHHHHcCCCCcCCHHHHhc
Confidence 3455789999999999886677666541 1355432 211 22 445566677788731 1111111
Q ss_pred cCCCCCCcEEEEEecc
Q 039294 158 PSDFKDFDLILAMDKQ 173 (253)
Q Consensus 158 ~~~l~~aDlIItM~~~ 173 (253)
-.+.|+|+..+..
T Consensus 87 ---~~~~D~V~i~tp~ 99 (350)
T 3rc1_A 87 ---RDDVDAVYVPLPA 99 (350)
T ss_dssp ---CTTCSEEEECCCG
T ss_pred ---CCCCCEEEECCCc
Confidence 1357999988764
No 56
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=49.27 E-value=49 Score=30.60 Aligned_cols=66 Identities=15% Similarity=0.242 Sum_probs=42.4
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCCC--CCCcccCCcCC
Q 039294 83 KPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIEI--TSISRPIRPSD 160 (253)
Q Consensus 83 ~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID~--sh~sr~Lt~~~ 160 (253)
+.++|+||-.|.+.+|.+|+.+.+. | +.|. |... . ..+. .+.|++.|+.+ +|....
T Consensus 17 ~~~~i~viG~G~sG~s~~A~~l~~~-----G----~~V~--~~D~---~--~~~~-~~~l~~~gi~~~~g~~~~~----- 74 (475)
T 1p3d_A 17 RVQQIHFIGIGGAGMSGIAEILLNE-----G----YQIS--GSDI---A--DGVV-TQRLAQAGAKIYIGHAEEH----- 74 (475)
T ss_dssp TCCEEEEETTTSTTHHHHHHHHHHH-----T----CEEE--EEES---C--CSHH-HHHHHHTTCEEEESCCGGG-----
T ss_pred cCCEEEEEeecHHHHHHHHHHHHhC-----C----CEEE--EECC---C--CCHH-HHHHHhCCCEEECCCCHHH-----
Confidence 3568999999999999999876542 3 2333 2221 1 1233 45688899885 565432
Q ss_pred CCCCcEEEEE
Q 039294 161 FKDFDLILAM 170 (253)
Q Consensus 161 l~~aDlIItM 170 (253)
+..+|+||+-
T Consensus 75 ~~~a~~vv~s 84 (475)
T 1p3d_A 75 IEGASVVVVS 84 (475)
T ss_dssp GTTCSEEEEC
T ss_pred cCCCCEEEEC
Confidence 3568887764
No 57
>1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9
Probab=47.38 E-value=66 Score=27.71 Aligned_cols=57 Identities=18% Similarity=0.149 Sum_probs=38.5
Q ss_pred cEEEEEc--CCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCC
Q 039294 85 FSVLFVC--LGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIE 148 (253)
Q Consensus 85 ~~VLFVC--tgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID 148 (253)
||||||- .|...|..+++.|= ++-++ . .+.+..+|-.. + |.+..+...+.|.+.|+|
T Consensus 1 m~ilf~GDv~g~~G~~~~~~~l~-~lr~~---~-d~vi~nge~~~-~-G~g~~~~~~~~l~~~G~D 59 (255)
T 1t70_A 1 MRVLFIGDVFGQPGRRVLQNHLP-TIRPQ---F-DFVIVNMENSA-G-GFGMHRDAARGALEAGAG 59 (255)
T ss_dssp CEEEEECCBBHHHHHHHHHHHHH-HHGGG---C-SEEEEECTBTT-T-TSSCCHHHHHHHHHHTCS
T ss_pred CEEEEEeccCChHHHHHHHHHHH-HHHhh---C-CEEEECCCCcc-C-CcCCCHHHHHHHHhCCCC
Confidence 6899973 14445555554332 22222 1 58889999764 3 667889999999999999
No 58
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=46.95 E-value=14 Score=28.39 Aligned_cols=40 Identities=25% Similarity=0.225 Sum_probs=29.4
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCC
Q 039294 84 PFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYH 129 (253)
Q Consensus 84 ~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~ 129 (253)
...|+|+|.+. -||..|..+|+. .|+ .++.+..+|+..|.
T Consensus 80 ~~~ivvyC~~G-~rS~~aa~~L~~----~G~-~~v~~l~GG~~~w~ 119 (148)
T 2fsx_A 80 ERPVIFLCRSG-NRSIGAAEVATE----AGI-TPAYNVLDGFEGHL 119 (148)
T ss_dssp -CCEEEECSSS-STHHHHHHHHHH----TTC-CSEEEETTTTTCCC
T ss_pred CCEEEEEcCCC-hhHHHHHHHHHH----cCC-cceEEEcCChhhhh
Confidence 35699999875 489888777765 355 36888899997663
No 59
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=46.86 E-value=14 Score=32.28 Aligned_cols=66 Identities=14% Similarity=0.259 Sum_probs=37.3
Q ss_pred cEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCCcCCCCCC
Q 039294 85 FSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIEITSISRPIRPSDFKDF 164 (253)
Q Consensus 85 ~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID~sh~sr~Lt~~~l~~a 164 (253)
.||-||-.||... |||..|+++ | ++|. + |. .++..++.+.+.|....... .+.+..+
T Consensus 6 ~kIgfIGLG~MG~-~mA~~L~~~-----G----~~V~--v---~d----r~~~~~~~l~~~G~~~~~s~----~e~~~~~ 62 (297)
T 4gbj_A 6 EKIAFLGLGNLGT-PIAEILLEA-----G----YELV--V---WN----RTASKAEPLTKLGATVVENA----IDAITPG 62 (297)
T ss_dssp CEEEEECCSTTHH-HHHHHHHHT-----T----CEEE--E---C-----------CTTTTTTCEECSSG----GGGCCTT
T ss_pred CcEEEEecHHHHH-HHHHHHHHC-----C----CeEE--E---Ee----CCHHHHHHHHHcCCeEeCCH----HHHHhcC
Confidence 5899999999884 788776642 3 3332 1 21 33444445556666532222 2345779
Q ss_pred cEEEEEecc
Q 039294 165 DLILAMDKQ 173 (253)
Q Consensus 165 DlIItM~~~ 173 (253)
|+||+|-..
T Consensus 63 dvvi~~l~~ 71 (297)
T 4gbj_A 63 GIVFSVLAD 71 (297)
T ss_dssp CEEEECCSS
T ss_pred Cceeeeccc
Confidence 999998764
No 60
>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}
Probab=46.39 E-value=8.1 Score=29.27 Aligned_cols=39 Identities=23% Similarity=0.348 Sum_probs=29.5
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCC
Q 039294 84 PFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDY 128 (253)
Q Consensus 84 ~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~ 128 (253)
...|+|+|.+. -||..|..+|+.+ |+ .++.+..+|+..|
T Consensus 86 ~~~ivvyC~~G-~rs~~a~~~L~~~----G~-~~v~~l~GG~~~W 124 (139)
T 2hhg_A 86 DKKFVFYCAGG-LRSALAAKTAQDM----GL-KPVAHIEGGFGAW 124 (139)
T ss_dssp SSEEEEECSSS-HHHHHHHHHHHHH----TC-CSEEEETTHHHHH
T ss_pred CCeEEEECCCC-hHHHHHHHHHHHc----CC-CCeEEecCCHHHH
Confidence 46799999886 4999888777654 54 3578888888665
No 61
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=45.92 E-value=81 Score=27.40 Aligned_cols=40 Identities=23% Similarity=0.380 Sum_probs=29.1
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeec
Q 039294 82 TKPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAG 124 (253)
Q Consensus 82 ~~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAG 124 (253)
.+++|||+|.-+|--..+-+..++..++++.| .|+|+-.-
T Consensus 2 ~~~~kvLiv~G~~~H~~~~~~~~l~~~l~~~g---~f~V~~~~ 41 (281)
T 4e5v_A 2 RKPIKTLLITGQNNHNWQVSHVVLKQILENSG---RFDVDFVI 41 (281)
T ss_dssp CCCEEEEEEESCCSSCHHHHHHHHHHHHHHTT---SEEEEEEE
T ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHHhcC---CEEEEEEe
Confidence 35789999976665566777778888888765 37777653
No 62
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=44.96 E-value=42 Score=28.78 Aligned_cols=73 Identities=15% Similarity=0.151 Sum_probs=42.9
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCH-HHHHHHHHcCCCCCCCcccCCcCC
Q 039294 82 TKPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADS-RMRAASKRRGIEITSISRPIRPSD 160 (253)
Q Consensus 82 ~~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp-~Av~vL~e~GID~sh~sr~Lt~~~ 160 (253)
++++||.+|-.|++.+.-++.++.+. .++++. |+.. .++ .+.++.++.|++.-..- ++.
T Consensus 4 M~~~~igiIG~G~~g~~~~~~~l~~~--------~~~~l~--av~d------~~~~~~~~~a~~~~~~~~~~~----~~l 63 (308)
T 3uuw_A 4 MKNIKMGMIGLGSIAQKAYLPILTKS--------ERFEFV--GAFT------PNKVKREKICSDYRIMPFDSI----ESL 63 (308)
T ss_dssp -CCCEEEEECCSHHHHHHTHHHHTSC--------SSSEEE--EEEC------SCHHHHHHHHHHHTCCBCSCH----HHH
T ss_pred cccCcEEEEecCHHHHHHHHHHHHhC--------CCeEEE--EEEC------CCHHHHHHHHHHcCCCCcCCH----HHH
Confidence 34689999999999988777766431 123433 2211 233 45556667898741111 122
Q ss_pred CCCCcEEEEEeccc
Q 039294 161 FKDFDLILAMDKQN 174 (253)
Q Consensus 161 l~~aDlIItM~~~~ 174 (253)
+.+.|+|+..+...
T Consensus 64 l~~~D~V~i~tp~~ 77 (308)
T 3uuw_A 64 AKKCDCIFLHSSTE 77 (308)
T ss_dssp HTTCSEEEECCCGG
T ss_pred HhcCCEEEEeCCcH
Confidence 34789999887643
No 63
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=43.93 E-value=57 Score=30.28 Aligned_cols=66 Identities=17% Similarity=0.242 Sum_probs=42.6
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCCC--CCCcccCCcCC
Q 039294 83 KPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIEI--TSISRPIRPSD 160 (253)
Q Consensus 83 ~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID~--sh~sr~Lt~~~ 160 (253)
+.++|+||-.|.+..|.+|+.+.+ +| +.|. |... . ..+. .+.|++.|+.+ +|... .
T Consensus 18 ~~~~v~viGiG~sG~s~~A~~l~~-----~G----~~V~--~~D~---~--~~~~-~~~l~~~gi~~~~g~~~~-----~ 75 (491)
T 2f00_A 18 RVRHIHFVGIGGAGMGGIAEVLAN-----EG----YQIS--GSDL---A--PNPV-TQQLMNLGATIYFNHRPE-----N 75 (491)
T ss_dssp TCCEEEEETTTSTTHHHHHHHHHH-----TT----CEEE--EECS---S--CCHH-HHHHHHTTCEEESSCCGG-----G
T ss_pred cCCEEEEEEcCHHHHHHHHHHHHh-----CC----CeEE--EECC---C--CCHH-HHHHHHCCCEEECCCCHH-----H
Confidence 457899999999999999987643 23 3333 3322 1 1333 45688899884 56543 2
Q ss_pred CCCCcEEEEE
Q 039294 161 FKDFDLILAM 170 (253)
Q Consensus 161 l~~aDlIItM 170 (253)
+..+|+||+-
T Consensus 76 ~~~a~~vv~s 85 (491)
T 2f00_A 76 VRDASVVVVS 85 (491)
T ss_dssp GTTCSEEEEC
T ss_pred cCCCCEEEEC
Confidence 3568887764
No 64
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=43.57 E-value=10 Score=27.47 Aligned_cols=38 Identities=16% Similarity=0.169 Sum_probs=28.0
Q ss_pred cEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCC
Q 039294 85 FSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDY 128 (253)
Q Consensus 85 ~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~ 128 (253)
..|+|+|.+.. ||..|..+|+.. |+ .++.+..+|+..|
T Consensus 59 ~~ivvyc~~g~-rs~~a~~~L~~~----G~-~~v~~l~GG~~~W 96 (108)
T 1gmx_A 59 TPVMVMCYHGN-SSKGAAQYLLQQ----GY-DVVYSIDGGFEAW 96 (108)
T ss_dssp SCEEEECSSSS-HHHHHHHHHHHH----TC-SSEEEETTHHHHH
T ss_pred CCEEEEcCCCc-hHHHHHHHHHHc----CC-ceEEEecCCHHHH
Confidence 56999998754 999988877754 54 3577778887655
No 65
>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A
Probab=42.23 E-value=90 Score=26.87 Aligned_cols=57 Identities=14% Similarity=0.171 Sum_probs=39.5
Q ss_pred cEEEEEc--CCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCC
Q 039294 85 FSVLFVC--LGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIE 148 (253)
Q Consensus 85 ~~VLFVC--tgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID 148 (253)
||||||- .|...|..+++.+-+-+ ++ . ++.+.-+|-.. + |.+..+...+.|.+.|+|
T Consensus 1 m~ilfiGDi~g~~G~~~v~~~l~~lr-~~---~-d~vi~ngen~~-~-G~g~~~~~~~~l~~~G~D 59 (252)
T 2z06_A 1 MRVLFIGDVMAEPGLRAVGLHLPDIR-DR---Y-DLVIANGENAA-R-GKGLDRRSYRLLREAGVD 59 (252)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHHG-GG---C-SEEEEECTTTT-T-TSSCCHHHHHHHHHHTCC
T ss_pred CEEEEEEecCCcccHHHHHHHHHHHH-hh---C-CEEEEeCCCcc-C-CCCcCHHHHHHHHhCCCC
Confidence 6899983 24455665555443332 22 1 58888888754 3 777889999999999999
No 66
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=41.86 E-value=32 Score=29.96 Aligned_cols=69 Identities=16% Similarity=0.233 Sum_probs=43.2
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCCcCCC
Q 039294 82 TKPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIEITSISRPIRPSDF 161 (253)
Q Consensus 82 ~~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID~sh~sr~Lt~~~l 161 (253)
..+++|.||-.|++.+ +||..+.+. | ++|. +. ..++...+.+.+.|+...... .+.+
T Consensus 29 ~~~~~I~iIG~G~mG~-~~a~~l~~~-----G----~~V~--~~-------dr~~~~~~~l~~~g~~~~~~~----~e~~ 85 (320)
T 4dll_A 29 PYARKITFLGTGSMGL-PMARRLCEA-----G----YALQ--VW-------NRTPARAASLAALGATIHEQA----RAAA 85 (320)
T ss_dssp CCCSEEEEECCTTTHH-HHHHHHHHT-----T----CEEE--EE-------CSCHHHHHHHHTTTCEEESSH----HHHH
T ss_pred cCCCEEEEECccHHHH-HHHHHHHhC-----C----CeEE--EE-------cCCHHHHHHHHHCCCEeeCCH----HHHH
Confidence 3568999999999984 577666542 3 2332 11 145667777777776521111 1235
Q ss_pred CCCcEEEEEecc
Q 039294 162 KDFDLILAMDKQ 173 (253)
Q Consensus 162 ~~aDlIItM~~~ 173 (253)
.++|+||.+...
T Consensus 86 ~~aDvVi~~vp~ 97 (320)
T 4dll_A 86 RDADIVVSMLEN 97 (320)
T ss_dssp TTCSEEEECCSS
T ss_pred hcCCEEEEECCC
Confidence 679999999764
No 67
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=41.43 E-value=1.5e+02 Score=25.55 Aligned_cols=74 Identities=9% Similarity=0.068 Sum_probs=42.5
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCC-CCCCcccCCcCCC
Q 039294 83 KPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIE-ITSISRPIRPSDF 161 (253)
Q Consensus 83 ~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID-~sh~sr~Lt~~~l 161 (253)
+++||.+|-.|++.+. ++.++.+. .++++. |+.. .-...+.+..++.|++ .......+-. -
T Consensus 4 ~~~~igiiG~G~~g~~-~~~~l~~~--------~~~~l~--av~d-----~~~~~~~~~~~~~~~~~~~~~~~~ll~--~ 65 (330)
T 3e9m_A 4 DKIRYGIMSTAQIVPR-FVAGLRES--------AQAEVR--GIAS-----RRLENAQKMAKELAIPVAYGSYEELCK--D 65 (330)
T ss_dssp CCEEEEECSCCTTHHH-HHHHHHHS--------SSEEEE--EEBC-----SSSHHHHHHHHHTTCCCCBSSHHHHHH--C
T ss_pred CeEEEEEECchHHHHH-HHHHHHhC--------CCcEEE--EEEe-----CCHHHHHHHHHHcCCCceeCCHHHHhc--C
Confidence 5689999999999875 55555432 135543 2221 1235567777788885 2111111100 1
Q ss_pred CCCcEEEEEeccc
Q 039294 162 KDFDLILAMDKQN 174 (253)
Q Consensus 162 ~~aDlIItM~~~~ 174 (253)
.+.|+|+..+..+
T Consensus 66 ~~~D~V~i~tp~~ 78 (330)
T 3e9m_A 66 ETIDIIYIPTYNQ 78 (330)
T ss_dssp TTCSEEEECCCGG
T ss_pred CCCCEEEEcCCCH
Confidence 3689999888643
No 68
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}
Probab=40.10 E-value=14 Score=27.33 Aligned_cols=38 Identities=16% Similarity=0.226 Sum_probs=27.6
Q ss_pred cEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCC
Q 039294 85 FSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDY 128 (253)
Q Consensus 85 ~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~ 128 (253)
..|+|+|.+.--||..|..+|+. .|+ ++.+..+|+..|
T Consensus 90 ~~ivvyC~~~G~rs~~a~~~L~~----~G~--~v~~l~GG~~~W 127 (134)
T 3g5j_A 90 DNIVIYCARGGMRSGSIVNLLSS----LGV--NVYQLEGGYKAY 127 (134)
T ss_dssp SEEEEECSSSSHHHHHHHHHHHH----TTC--CCEEETTHHHHH
T ss_pred CeEEEEECCCChHHHHHHHHHHH----cCC--ceEEEeCcHHHH
Confidence 67999996444799988877764 365 577778887654
No 69
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=39.75 E-value=58 Score=28.81 Aligned_cols=91 Identities=12% Similarity=0.230 Sum_probs=45.4
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCC-CCHHHHHHHHHcCCCCCCCcccCCcCCC
Q 039294 83 KPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNP-ADSRMRAASKRRGIEITSISRPIRPSDF 161 (253)
Q Consensus 83 ~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~p-vdp~Av~vL~e~GID~sh~sr~Lt~~~l 161 (253)
++|||+|..+++ +|-..|+.++.. |. +-+-|.|---.+...|.. ....+.+.++++||+. +.+..+..+++
T Consensus 2 ~~mrIvf~Gt~~-----fa~~~L~~L~~~-~~-~i~~Vvt~pd~p~grg~~~~~~~v~~~A~~~gIpv-~~~~~~~~~~~ 73 (314)
T 1fmt_A 2 ESLRIIFAGTPD-----FAARHLDALLSS-GH-NVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPV-FQPVSLRPQEN 73 (314)
T ss_dssp CCCEEEEEECSH-----HHHHHHHHHHHT-TC-EEEEEECCCCBC------CBCCHHHHHHHHTTCCE-ECCSCSCSHHH
T ss_pred CCCEEEEEecCH-----HHHHHHHHHHHC-CC-cEEEEEeCCCCccccccccCcCHHHHHHHHcCCcE-EecCCCCCHHH
Confidence 468999999875 444445555442 21 112233320011000111 1245777888999995 12222322111
Q ss_pred ------CCCcEEEEEeccc--hHHHHHH
Q 039294 162 ------KDFDLILAMDKQN--RQDILEA 181 (253)
Q Consensus 162 ------~~aDlIItM~~~~--~~~L~~~ 181 (253)
.+.|+||+..-.. -..+++.
T Consensus 74 ~~~l~~~~~Dliv~~~y~~ilp~~il~~ 101 (314)
T 1fmt_A 74 QQLVAELQADVMVVVAYGLILPKAVLEM 101 (314)
T ss_dssp HHHHHHTTCSEEEEESCCSCCCHHHHHS
T ss_pred HHHHHhcCCCEEEEeeccccCCHHHHhh
Confidence 3689999987644 2444443
No 70
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=37.92 E-value=72 Score=26.94 Aligned_cols=67 Identities=13% Similarity=0.154 Sum_probs=40.3
Q ss_pred CcEEEEEcC-CCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCCcCCCC
Q 039294 84 PFSVLFVCL-GNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIEITSISRPIRPSDFK 162 (253)
Q Consensus 84 ~~~VLFVCt-gNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID~sh~sr~Lt~~~l~ 162 (253)
+++|.||-. ||+.++ ||..+.+ .| ++|. ++. .++...+.+.+.|++.. .+ .+.+.
T Consensus 11 mm~I~iIG~tG~mG~~-la~~l~~-----~g----~~V~--~~~-------r~~~~~~~~~~~g~~~~----~~-~~~~~ 66 (286)
T 3c24_A 11 PKTVAILGAGGKMGAR-ITRKIHD-----SA----HHLA--AIE-------IAPEGRDRLQGMGIPLT----DG-DGWID 66 (286)
T ss_dssp CCEEEEETTTSHHHHH-HHHHHHH-----SS----SEEE--EEC-------CSHHHHHHHHHTTCCCC----CS-SGGGG
T ss_pred CCEEEEECCCCHHHHH-HHHHHHh-----CC----CEEE--EEE-------CCHHHHHHHHhcCCCcC----CH-HHHhc
Confidence 479999999 988754 5555442 23 2333 221 24555666667787642 11 23457
Q ss_pred CCcEEEEEeccc
Q 039294 163 DFDLILAMDKQN 174 (253)
Q Consensus 163 ~aDlIItM~~~~ 174 (253)
++|+||......
T Consensus 67 ~aDvVi~av~~~ 78 (286)
T 3c24_A 67 EADVVVLALPDN 78 (286)
T ss_dssp TCSEEEECSCHH
T ss_pred CCCEEEEcCCch
Confidence 899999887643
No 71
>1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9
Probab=36.98 E-value=68 Score=28.09 Aligned_cols=61 Identities=16% Similarity=0.244 Sum_probs=43.7
Q ss_pred CCcEEEEEc--CCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCC
Q 039294 83 KPFSVLFVC--LGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIE 148 (253)
Q Consensus 83 ~~~~VLFVC--tgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID 148 (253)
..++|||+. .|...|..+++.+= ++-++.+ ..+.+..+|... . |.+..+...+.|.+.|+|
T Consensus 3 ~~m~ilf~GDv~G~~G~~~l~~~l~-~lr~~~~--~d~vi~Ngen~~-g-G~g~~~~~~~~ln~~G~D 65 (281)
T 1t71_A 3 NSIKFIFLGDVYGKAGRNIIKNNLA-QLKSKYQ--ADLVIVNAENTT-H-GKGLSLKHYEFLKEAGVN 65 (281)
T ss_dssp CCCEEEEECEEBHHHHHHHHHTTHH-HHHHHHT--CSEEEEECTBTT-T-TSSCCHHHHHHHHHHTCC
T ss_pred ceEEEEEECCcCChHHHHHHHHHHH-HHHHhcC--CCEEEEcCCCCC-C-CCCcCHHHHHHHHhcCCC
Confidence 358999997 66677877776543 3333332 257777788754 2 567889999999999999
No 72
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=36.14 E-value=48 Score=30.43 Aligned_cols=69 Identities=13% Similarity=0.167 Sum_probs=40.8
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCCC--CCCcccCCcCC
Q 039294 83 KPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIEI--TSISRPIRPSD 160 (253)
Q Consensus 83 ~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID~--sh~sr~Lt~~~ 160 (253)
+.++|+||-.|.+.+|- |+.+.+ +|. .+.+.=.... ..+...+.|++.||++ +|.+.. .
T Consensus 8 ~~k~v~viG~G~sG~s~-A~~l~~-----~G~--~V~~~D~~~~-------~~~~~~~~L~~~gi~~~~g~~~~~----~ 68 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAA-ARLLAK-----LGA--IVTVNDGKPF-------DENPTAQSLLEEGIKVVCGSHPLE----L 68 (451)
T ss_dssp TTCEEEEECCTTTHHHH-HHHHHH-----TTC--EEEEEESSCG-------GGCHHHHHHHHTTCEEEESCCCGG----G
T ss_pred CCCEEEEEeeCHHHHHH-HHHHHh-----CCC--EEEEEeCCcc-------cCChHHHHHHhCCCEEEECCChHH----h
Confidence 45799999999999983 544332 332 3433222210 1223557889999984 554332 2
Q ss_pred CCC-CcEEEEE
Q 039294 161 FKD-FDLILAM 170 (253)
Q Consensus 161 l~~-aDlIItM 170 (253)
+.. +|+||.-
T Consensus 69 ~~~~~d~vv~s 79 (451)
T 3lk7_A 69 LDEDFCYMIKN 79 (451)
T ss_dssp GGSCEEEEEEC
T ss_pred hcCCCCEEEEC
Confidence 344 8988864
No 73
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=35.10 E-value=50 Score=29.15 Aligned_cols=78 Identities=15% Similarity=0.127 Sum_probs=40.3
Q ss_pred CCCCCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCCCC--CCcccCC
Q 039294 80 ATTKPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIEIT--SISRPIR 157 (253)
Q Consensus 80 ~~~~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID~s--h~sr~Lt 157 (253)
.+++++||.+|-.|++.+ .++.++.+. . .++++.. +.. .-...+.++.++.|++.. ..-..+-
T Consensus 19 ~~m~~~rvgiIG~G~~g~-~~~~~l~~~----~---~~~~lva--v~d-----~~~~~~~~~a~~~g~~~~~~~~~~~ll 83 (357)
T 3ec7_A 19 FQGMTLKAGIVGIGMIGS-DHLRRLANT----V---SGVEVVA--VCD-----IVAGRAQAALDKYAIEAKDYNDYHDLI 83 (357)
T ss_dssp ---CCEEEEEECCSHHHH-HHHHHHHHT----C---TTEEEEE--EEC-----SSTTHHHHHHHHHTCCCEEESSHHHHH
T ss_pred cCCCeeeEEEECCcHHHH-HHHHHHHhh----C---CCcEEEE--EEe-----CCHHHHHHHHHHhCCCCeeeCCHHHHh
Confidence 445678999999999876 345444421 1 2355432 221 112346666777886421 1111110
Q ss_pred cCCCCCCcEEEEEeccc
Q 039294 158 PSDFKDFDLILAMDKQN 174 (253)
Q Consensus 158 ~~~l~~aDlIItM~~~~ 174 (253)
. -.+.|+|+..+..+
T Consensus 84 ~--~~~~D~V~i~tp~~ 98 (357)
T 3ec7_A 84 N--DKDVEVVIITASNE 98 (357)
T ss_dssp H--CTTCCEEEECSCGG
T ss_pred c--CCCCCEEEEcCCcH
Confidence 0 13589999887643
No 74
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=34.86 E-value=92 Score=28.13 Aligned_cols=80 Identities=9% Similarity=0.071 Sum_probs=41.9
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCCC--CC-Cccc-CC
Q 039294 82 TKPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIEI--TS-ISRP-IR 157 (253)
Q Consensus 82 ~~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID~--sh-~sr~-Lt 157 (253)
++++||.+|-.|+ ++.|+...+..+... ..+++. ||+.. .-...+.++.++.|++- .. .-.. |.
T Consensus 35 m~~~rvgiiG~G~--~~~ig~~h~~~~~~~----~~~~lv-a~v~d-----~~~~~a~~~a~~~g~~~~~~~~~~~~ll~ 102 (417)
T 3v5n_A 35 QKRIRLGMVGGGS--GAFIGAVHRIAARLD----DHYELV-AGALS-----STPEKAEASGRELGLDPSRVYSDFKEMAI 102 (417)
T ss_dssp CCCEEEEEESCC----CHHHHHHHHHHHHT----SCEEEE-EEECC-----SSHHHHHHHHHHHTCCGGGBCSCHHHHHH
T ss_pred CCcceEEEEcCCC--chHHHHHHHHHHhhC----CCcEEE-EEEeC-----CCHHHHHHHHHHcCCCcccccCCHHHHHh
Confidence 5678999999999 234444444443321 246654 45532 12345666777889961 11 1111 11
Q ss_pred cCC--CCCCcEEEEEecc
Q 039294 158 PSD--FKDFDLILAMDKQ 173 (253)
Q Consensus 158 ~~~--l~~aDlIItM~~~ 173 (253)
.+. -.+.|+|+..+..
T Consensus 103 ~~~~~~~~vD~V~I~tp~ 120 (417)
T 3v5n_A 103 REAKLKNGIEAVAIVTPN 120 (417)
T ss_dssp HHHHCTTCCSEEEECSCT
T ss_pred cccccCCCCcEEEECCCc
Confidence 100 0347999888763
No 75
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=34.72 E-value=89 Score=26.69 Aligned_cols=69 Identities=19% Similarity=0.146 Sum_probs=42.2
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCCcCCCC
Q 039294 83 KPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIEITSISRPIRPSDFK 162 (253)
Q Consensus 83 ~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID~sh~sr~Lt~~~l~ 162 (253)
++++|.||-.|++.+ +||..+.+ .| ++|. +. ..++..++.+.+.|+... ...+ .+.+.
T Consensus 6 ~~~~I~iIG~G~mG~-~~a~~l~~-----~G----~~V~--~~-------dr~~~~~~~~~~~g~~~~--~~~~-~e~~~ 63 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGM-GAARSCLR-----AG----LSTW--GA-------DLNPQACANLLAEGACGA--AASA-REFAG 63 (303)
T ss_dssp -CCEEEEECCSHHHH-HHHHHHHH-----TT----CEEE--EE-------CSCHHHHHHHHHTTCSEE--ESSS-TTTTT
T ss_pred CCCeEEEECCCHHHH-HHHHHHHH-----CC----CeEE--EE-------ECCHHHHHHHHHcCCccc--cCCH-HHHHh
Confidence 457999999999875 46655543 23 2332 11 145667777888876520 1111 23457
Q ss_pred CCcEEEEEecc
Q 039294 163 DFDLILAMDKQ 173 (253)
Q Consensus 163 ~aDlIItM~~~ 173 (253)
++|+||.+...
T Consensus 64 ~aDvvi~~vp~ 74 (303)
T 3g0o_A 64 VVDALVILVVN 74 (303)
T ss_dssp TCSEEEECCSS
T ss_pred cCCEEEEECCC
Confidence 89999999875
No 76
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=34.41 E-value=32 Score=25.02 Aligned_cols=39 Identities=21% Similarity=0.271 Sum_probs=25.9
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCC
Q 039294 84 PFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYH 129 (253)
Q Consensus 84 ~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~ 129 (253)
...|+|+|.+. -||..|..+|+. .|+ +.+ ...+|+.+|.
T Consensus 56 ~~~ivv~C~~G-~rS~~aa~~L~~----~G~-~~~-~l~GG~~~W~ 94 (103)
T 3iwh_A 56 NEIYYIVCAGG-VRSAKVVEYLEA----NGI-DAV-NVEGGMHAWG 94 (103)
T ss_dssp TSEEEEECSSS-SHHHHHHHHHHT----TTC-EEE-EETTHHHHHC
T ss_pred CCeEEEECCCC-HHHHHHHHHHHH----cCC-CEE-EecChHHHHH
Confidence 46799999764 589998877654 455 233 3467776654
No 77
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=34.01 E-value=62 Score=27.52 Aligned_cols=67 Identities=13% Similarity=0.226 Sum_probs=40.6
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCCcCCCC
Q 039294 83 KPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIEITSISRPIRPSDFK 162 (253)
Q Consensus 83 ~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID~sh~sr~Lt~~~l~ 162 (253)
+|+||.||-.||+.+ .||..+.+ .| ++|. +. ..++...+.+.+.|+...... .+.+.
T Consensus 2 ~m~~I~iiG~G~mG~-~~a~~l~~-----~G----~~V~--~~-------d~~~~~~~~~~~~g~~~~~~~----~~~~~ 58 (302)
T 2h78_A 2 HMKQIAFIGLGHMGA-PMATNLLK-----AG----YLLN--VF-------DLVQSAVDGLVAAGASAARSA----RDAVQ 58 (302)
T ss_dssp -CCEEEEECCSTTHH-HHHHHHHH-----TT----CEEE--EE-------CSSHHHHHHHHHTTCEECSSH----HHHHT
T ss_pred CCCEEEEEeecHHHH-HHHHHHHh-----CC----CeEE--EE-------cCCHHHHHHHHHCCCeEcCCH----HHHHh
Confidence 468999999999885 46655553 23 2332 11 145666777777776531111 12356
Q ss_pred CCcEEEEEec
Q 039294 163 DFDLILAMDK 172 (253)
Q Consensus 163 ~aDlIItM~~ 172 (253)
++|+||.+..
T Consensus 59 ~aDvvi~~vp 68 (302)
T 2h78_A 59 GADVVISMLP 68 (302)
T ss_dssp TCSEEEECCS
T ss_pred CCCeEEEECC
Confidence 7899998874
No 78
>2efe_B Small GTP-binding protein-like; GEF, GTPase, VPS9, nucleotide, transport protein; HET: GNH; 2.08A {Arabidopsis thaliana} PDB: 2efd_B 2efc_B* 2efh_B*
Probab=33.66 E-value=24 Score=26.76 Aligned_cols=35 Identities=14% Similarity=0.093 Sum_probs=23.0
Q ss_pred cccCCCCCCCCcEEEEEcCCCchHHHHHHHHHHHH
Q 039294 74 SMASSAATTKPFSVLFVCLGNICRSPAAEGVFRDI 108 (253)
Q Consensus 74 ~~~~~~~~~~~~~VLFVCtgNiCRSpMAEal~r~~ 108 (253)
+|+.+.......+|++|...|++.|.+...++...
T Consensus 2 sm~~~~~~~~~~ki~v~G~~~~GKSsli~~l~~~~ 36 (181)
T 2efe_B 2 SMAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQ 36 (181)
T ss_dssp --------CEEEEEEEECCTTSCHHHHHHHHHHCC
T ss_pred CccCCCCCccceEEEEECcCCCCHHHHHHHHHcCC
Confidence 45544445556899999999999999988887643
No 79
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=33.12 E-value=1.3e+02 Score=26.46 Aligned_cols=71 Identities=17% Similarity=0.297 Sum_probs=40.5
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCCC-CCCcccCCcCCC
Q 039294 83 KPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIEI-TSISRPIRPSDF 161 (253)
Q Consensus 83 ~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID~-sh~sr~Lt~~~l 161 (253)
+++||.+|-.|++.+ .++.++.+. .++++. |+.. .++...+..++.|+.. +....-+..
T Consensus 4 ~~~~vgiiG~G~~g~-~~~~~l~~~--------~~~~l~--av~d------~~~~~~~~a~~~g~~~~~~~~~ll~~--- 63 (359)
T 3e18_A 4 KKYQLVIVGYGGMGS-YHVTLASAA--------DNLEVH--GVFD------ILAEKREAAAQKGLKIYESYEAVLAD--- 63 (359)
T ss_dssp CCEEEEEECCSHHHH-HHHHHHHTS--------TTEEEE--EEEC------SSHHHHHHHHTTTCCBCSCHHHHHHC---
T ss_pred CcCcEEEECcCHHHH-HHHHHHHhC--------CCcEEE--EEEc------CCHHHHHHHHhcCCceeCCHHHHhcC---
Confidence 468999999999887 555554321 135543 2221 3444455567778763 111111111
Q ss_pred CCCcEEEEEecc
Q 039294 162 KDFDLILAMDKQ 173 (253)
Q Consensus 162 ~~aDlIItM~~~ 173 (253)
.+.|+|+..+..
T Consensus 64 ~~~D~V~i~tp~ 75 (359)
T 3e18_A 64 EKVDAVLIATPN 75 (359)
T ss_dssp TTCCEEEECSCG
T ss_pred CCCCEEEEcCCc
Confidence 368999988764
No 80
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=33.07 E-value=57 Score=27.00 Aligned_cols=54 Identities=17% Similarity=0.180 Sum_probs=35.8
Q ss_pred CCCcEEEEEcCCCchHH-------HHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcC
Q 039294 82 TKPFSVLFVCLGNICRS-------PAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRG 146 (253)
Q Consensus 82 ~~~~~VLFVCtgNiCRS-------pMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~G 146 (253)
..+++|-++|..+.+.. .+|+.+.+.+++. ++.+.|+|- + | ++..+.+...+.|
T Consensus 21 ~~m~~IaV~Gss~~~~~~~~~~~~~~A~~lg~~LA~~-----G~~vVsGg~-~---G--iM~aa~~gAl~~G 81 (195)
T 1rcu_A 21 GHMKKVVVVGYSGPVNKSPVSELRDICLELGRTLAKK-----GYLVFNGGR-D---G--VMELVSQGVREAG 81 (195)
T ss_dssp --CCEEEEEECCSCTTSTTTGGGHHHHHHHHHHHHHT-----TCEEEECCS-S---H--HHHHHHHHHHHTT
T ss_pred CCCCeEEEEecCCCCCccccHHHHHHHHHHHHHHHHC-----CCEEEeCCH-H---H--HHHHHHHHHHHcC
Confidence 34568999999876322 5888898888862 578888553 2 3 6666666555554
No 81
>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}
Probab=33.05 E-value=12 Score=28.44 Aligned_cols=40 Identities=18% Similarity=0.311 Sum_probs=29.1
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCC
Q 039294 83 KPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDY 128 (253)
Q Consensus 83 ~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~ 128 (253)
+...|+|+|.+. -||..|..+|+. .|+. ++.+..+|+..|
T Consensus 90 ~~~~ivvyC~~G-~rs~~aa~~L~~----~G~~-~v~~l~GG~~~W 129 (139)
T 3d1p_A 90 SAKELIFYCASG-KRGGEAQKVASS----HGYS-NTSLYPGSMNDW 129 (139)
T ss_dssp TTSEEEEECSSS-HHHHHHHHHHHT----TTCC-SEEECTTHHHHH
T ss_pred CCCeEEEECCCC-chHHHHHHHHHH----cCCC-CeEEeCCcHHHH
Confidence 346799999875 599998887764 3553 577777887655
No 82
>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A
Probab=32.75 E-value=40 Score=25.36 Aligned_cols=36 Identities=8% Similarity=-0.055 Sum_probs=26.3
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeecc
Q 039294 84 PFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGT 125 (253)
Q Consensus 84 ~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt 125 (253)
...|+|+|... .||.+|..+|+.+ |+ .++.....|+
T Consensus 74 ~~~ivv~C~sG-~RS~~aa~~L~~~----G~-~~v~~l~GG~ 109 (134)
T 1vee_A 74 NTTLYILDKFD-GNSELVAELVALN----GF-KSAYAIKDGA 109 (134)
T ss_dssp GCEEEEECSSS-TTHHHHHHHHHHH----TC-SEEEECTTTT
T ss_pred CCEEEEEeCCC-CcHHHHHHHHHHc----CC-cceEEecCCc
Confidence 36799999866 4999998888754 54 2466667887
No 83
>1weh_A Conserved hypothetical protein TT1887; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.129.1.1
Probab=31.28 E-value=68 Score=25.70 Aligned_cols=51 Identities=10% Similarity=0.100 Sum_probs=36.8
Q ss_pred cEEEEEcCCCchHH----HHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcC
Q 039294 85 FSVLFVCLGNICRS----PAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRG 146 (253)
Q Consensus 85 ~~VLFVCtgNiCRS----pMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~G 146 (253)
++|-++|..+.-.. ..|+.+.+.+++. ++.+.|+|-. | +...+.+...+.|
T Consensus 2 ~~V~V~gs~~~~~~~~~~~~A~~lg~~La~~-----g~~lV~Ggg~----G--iM~aa~~gAl~~g 56 (171)
T 1weh_A 2 RLLAVFVSSRLSPEDPLYARWVRYGEVLAEE-----GFGLACGGYQ----G--GMEALARGVKAKG 56 (171)
T ss_dssp EEEEEECCSSCCTTSHHHHHHHHHHHHHHHT-----TEEEEECCSS----T--HHHHHHHHHHHTT
T ss_pred CEEEEEeCCCCCCCcHHHHHHHHHHHHHHHC-----CCEEEeCChh----h--HHHHHHHHHHHcC
Confidence 56999999988643 4888888888762 5899999942 3 6666666666654
No 84
>3a11_A Translation initiation factor EIF-2B, delta subun; isomerase, hexamer, rossmann fold; 2.50A {Thermococcus kodakaraensis} PDB: 3a9c_A* 3vm6_A*
Probab=31.14 E-value=42 Score=30.24 Aligned_cols=79 Identities=14% Similarity=0.113 Sum_probs=49.8
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCCcCCCC
Q 039294 83 KPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIEITSISRPIRPSDFK 162 (253)
Q Consensus 83 ~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID~sh~sr~Lt~~~l~ 162 (253)
....||-.|.. --|+++++.... .|. .+.|.-.-+.|+..| ..+...|.+.||+....+-..-...+.
T Consensus 141 ~g~~ILTh~~S-----~tvl~~l~~A~~-~gk--~~~V~v~EtRP~~qG----rltA~eL~~~GI~vtlI~Dsa~~~~M~ 208 (338)
T 3a11_A 141 DGDVIMTHCHS-----KAAISVMKTAWE-QGK--DIKVIVTETRPKWQG----KITAKELASYGIPVIYVVDSAARHYMK 208 (338)
T ss_dssp TTCEEEECSCC-----HHHHHHHHHHHH-TTC--CCEEEEECCTTTTHH----HHHHHHHHHTTCCEEEECGGGTTTTGG
T ss_pred CCCEEEEeCCc-----HHHHHHHHHHHH-CCC--eEEEEEeCCCCchhh----HHHHHHHHhCCCCEEEEehHHHHHHHH
Confidence 34678887654 566777776654 342 588888888886544 566788899999943211111122336
Q ss_pred CCcEEEEEecc
Q 039294 163 DFDLILAMDKQ 173 (253)
Q Consensus 163 ~aDlIItM~~~ 173 (253)
+.|.||+=.+.
T Consensus 209 ~Vd~VivGAd~ 219 (338)
T 3a11_A 209 MTDKVVMGADS 219 (338)
T ss_dssp GCSEEEECCSE
T ss_pred hCCEEEECccE
Confidence 78888775553
No 85
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=30.77 E-value=23 Score=25.67 Aligned_cols=38 Identities=18% Similarity=0.231 Sum_probs=27.7
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCC
Q 039294 84 PFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDY 128 (253)
Q Consensus 84 ~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~ 128 (253)
...|+|+|.+. -||..|..+|+. .|+ ++.+..+|+..|
T Consensus 55 ~~~ivvyC~~G-~rs~~aa~~L~~----~G~--~v~~l~GG~~~W 92 (108)
T 3gk5_A 55 DKKYAVICAHG-NRSAAAVEFLSQ----LGL--NIVDVEGGIQSW 92 (108)
T ss_dssp TSCEEEECSSS-HHHHHHHHHHHT----TTC--CEEEETTHHHHH
T ss_pred CCeEEEEcCCC-cHHHHHHHHHHH----cCC--CEEEEcCcHHHH
Confidence 35799999654 688888776654 465 577888888665
No 86
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=30.35 E-value=14 Score=28.43 Aligned_cols=38 Identities=13% Similarity=0.231 Sum_probs=26.5
Q ss_pred cEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCC
Q 039294 85 FSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDY 128 (253)
Q Consensus 85 ~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~ 128 (253)
..|+|+|.+. -||..|..+|+. .|+ .++.+..+|+..|
T Consensus 57 ~~ivvyC~~g-~rs~~aa~~L~~----~G~-~~v~~l~GG~~~W 94 (141)
T 3ilm_A 57 RDIYVYGAGD-EQTSQAVNLLRS----AGF-EHVSELKGGLAAW 94 (141)
T ss_dssp SEEEEECSSH-HHHHHHHHHHHH----TTC-CSEEECTTHHHHH
T ss_pred CeEEEEECCC-hHHHHHHHHHHH----cCC-CCEEEecCHHHHH
Confidence 5699999854 688888777654 355 3566667776554
No 87
>2e85_A Hydrogenase 3 maturation protease; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2i8l_A
Probab=30.31 E-value=60 Score=25.71 Aligned_cols=41 Identities=12% Similarity=0.223 Sum_probs=27.9
Q ss_pred cEEEEEcCCCchHH--HHHHHHHHHHHHhcCCCCcEEEEeeccCC
Q 039294 85 FSVLFVCLGNICRS--PAAEGVFRDIVKKRGIDSKFNIDSAGTID 127 (253)
Q Consensus 85 ~~VLFVCtgNiCRS--pMAEal~r~~~~~~gl~~~i~V~SAGt~~ 127 (253)
||+|++|.||.-|. -..=.+.+.+.+ +. +.+|++.-+|+.+
T Consensus 4 M~~lVlGiGN~l~gDDG~G~~v~~~L~~-~~-~~~v~vid~gt~~ 46 (159)
T 2e85_A 4 VTDVLLCVGNSMMGDDGAGPLLAEKCAA-AP-KGNWVVIDGGSAP 46 (159)
T ss_dssp CCEEEEEECCGGGGGGGHHHHHHHHHHH-SC-CTTCEEEECTTCS
T ss_pred CCEEEEEECCcccccccHHHHHHHHHhh-hC-CCCeEEEECCCCH
Confidence 68999999999987 333333444332 22 3568999999865
No 88
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=30.00 E-value=1.1e+02 Score=28.11 Aligned_cols=41 Identities=20% Similarity=0.145 Sum_probs=32.0
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeecc
Q 039294 83 KPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGT 125 (253)
Q Consensus 83 ~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt 125 (253)
.+..|+|+..++++.|..+..|+..+..+.|. ++-+..+.+
T Consensus 99 ~~~vI~ivG~~GvGKTT~a~~LA~~l~~~~G~--kVllvd~D~ 139 (433)
T 2xxa_A 99 PPAVVLMAGLQGAGKTTSVGKLGKFLREKHKK--KVLVVSADV 139 (433)
T ss_dssp SSEEEEEECSTTSSHHHHHHHHHHHHHHTSCC--CEEEEECCC
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHHhcCC--eEEEEecCC
Confidence 45679999999999999999999888764353 566666665
No 89
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=29.63 E-value=13 Score=27.04 Aligned_cols=38 Identities=13% Similarity=0.229 Sum_probs=26.6
Q ss_pred cEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCC
Q 039294 85 FSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDY 128 (253)
Q Consensus 85 ~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~ 128 (253)
..|+|+|.+. .||..|..+|+.+ |+ .++.+..+|+..|
T Consensus 53 ~~ivvyc~~g-~rs~~a~~~L~~~----G~-~~v~~l~GG~~~W 90 (106)
T 3hix_A 53 RDIYVYGAGD-EQTSQAVNLLRSA----GF-EHVSELKGGLAAW 90 (106)
T ss_dssp SCEEEECSSH-HHHHHHHHHHHHT----TC-SCEEECTTHHHHH
T ss_pred CeEEEEECCC-ChHHHHHHHHHHc----CC-cCEEEecCCHHHH
Confidence 4699999854 5788888777643 55 3577777777655
No 90
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=29.24 E-value=96 Score=27.48 Aligned_cols=84 Identities=7% Similarity=0.113 Sum_probs=42.6
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCC-CCHHHHHHHHHcCCCCCCCcccCCcCC-
Q 039294 83 KPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNP-ADSRMRAASKRRGIEITSISRPIRPSD- 160 (253)
Q Consensus 83 ~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~p-vdp~Av~vL~e~GID~sh~sr~Lt~~~- 160 (253)
+++||+|..|. .+|-..|+.++.. +. +-+-|.|---.+...|.. ....+.+..+++||+. +.+..+...+
T Consensus 6 ~~mrivf~Gt~-----~fa~~~L~~L~~~-~~-~v~~Vvt~pd~p~grg~~~~~~~v~~~A~~~gIpv-~~~~~~~~~~~ 77 (318)
T 3q0i_A 6 QSLRIVFAGTP-----DFAARHLAALLSS-EH-EIIAVYTQPERPAGRGKKLTASPVKTLALEHNVPV-YQPENFKSDES 77 (318)
T ss_dssp -CCEEEEECCS-----HHHHHHHHHHHTS-SS-EEEEEECCCC---------CCCHHHHHHHHTTCCE-ECCSCSCSHHH
T ss_pred cCCEEEEEecC-----HHHHHHHHHHHHC-CC-cEEEEEcCCCCcccccccCCCCHHHHHHHHcCCCE-EccCcCCCHHH
Confidence 36899999886 4555666666642 21 112233311011000111 2334677888999995 1222232211
Q ss_pred -----CCCCcEEEEEeccc
Q 039294 161 -----FKDFDLILAMDKQN 174 (253)
Q Consensus 161 -----l~~aDlIItM~~~~ 174 (253)
-.+.|+||+..-..
T Consensus 78 ~~~l~~~~~Dliv~~~y~~ 96 (318)
T 3q0i_A 78 KQQLAALNADLMVVVAYGL 96 (318)
T ss_dssp HHHHHTTCCSEEEESSCCS
T ss_pred HHHHHhcCCCEEEEeCccc
Confidence 13689999987644
No 91
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=29.21 E-value=2.3e+02 Score=25.59 Aligned_cols=76 Identities=11% Similarity=0.171 Sum_probs=42.3
Q ss_pred CCCCCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCH-HHHHHHHHcCCCC----CCCcc
Q 039294 80 ATTKPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADS-RMRAASKRRGIEI----TSISR 154 (253)
Q Consensus 80 ~~~~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp-~Av~vL~e~GID~----sh~sr 154 (253)
..++++||.||..|++.+..++.++.+ . .++++. ++.. .++ .+.++.++.|++. ...
T Consensus 79 ~~~~~irigiIG~G~~g~~~~~~~l~~-----~---~~~~lv--av~d------~~~~~~~~~a~~~g~~~~~~~~~~-- 140 (433)
T 1h6d_A 79 PEDRRFGYAIVGLGKYALNQILPGFAG-----C---QHSRIE--ALVS------GNAEKAKIVAAEYGVDPRKIYDYS-- 140 (433)
T ss_dssp CCCCCEEEEEECCSHHHHHTHHHHTTT-----C---SSEEEE--EEEC------SCHHHHHHHHHHTTCCGGGEECSS--
T ss_pred CCCCceEEEEECCcHHHHHHHHHHHhh-----C---CCcEEE--EEEc------CCHHHHHHHHHHhCCCcccccccC--
Confidence 345678999999999876555554432 1 234442 2221 233 4555666778861 110
Q ss_pred cCCcCCC--CCCcEEEEEeccc
Q 039294 155 PIRPSDF--KDFDLILAMDKQN 174 (253)
Q Consensus 155 ~Lt~~~l--~~aDlIItM~~~~ 174 (253)
.+ .+.+ .+.|+|+..+..+
T Consensus 141 ~~-~~ll~~~~vD~V~iatp~~ 161 (433)
T 1h6d_A 141 NF-DKIAKDPKIDAVYIILPNS 161 (433)
T ss_dssp SG-GGGGGCTTCCEEEECSCGG
T ss_pred CH-HHHhcCCCCCEEEEcCCch
Confidence 01 1122 2689999888643
No 92
>3op3_A M-phase inducer phosphatase 3; structural genomics, structural genomics consortium, SGC, Al alpha sandwich, kinase, cytosol, hydrolase; 2.63A {Homo sapiens}
Probab=28.27 E-value=27 Score=29.25 Aligned_cols=45 Identities=18% Similarity=0.214 Sum_probs=32.1
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHHHHHhc------CCCCcEEEEeeccCCCC
Q 039294 84 PFSVLFVCLGNICRSPAAEGVFRDIVKKR------GIDSKFNIDSAGTIDYH 129 (253)
Q Consensus 84 ~~~VLFVCtgNiCRSpMAEal~r~~~~~~------gl~~~i~V~SAGt~~~~ 129 (253)
+..|+|.|...--||+.|..+++...... |+. ++.+-.+|+..|.
T Consensus 124 ~~~VVvyC~~SG~Rs~~aa~~L~~~~~~~~~y~~lGf~-~V~~L~GG~~aW~ 174 (216)
T 3op3_A 124 RIIIVFHCEFSSERGPRMCRCLREEDRSLNQYPALYYP-ELYILKGGYRDFF 174 (216)
T ss_dssp EEEEEEECCC--CCHHHHHHHHHHHHHHTSSTTCCSCC-CEEEETTHHHHHT
T ss_pred CCEEEEEeCCCChHHHHHHHHHHHcCcccccccccCCC-cEEEECCcHHHHH
Confidence 34599999977789999999998875321 332 5778889987764
No 93
>3i9v_2 NADH-quinone oxidoreductase subunit 2; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_2* 2fug_2* 3iam_2* 3ias_2* 3m9s_2*
Probab=28.15 E-value=73 Score=25.98 Aligned_cols=43 Identities=23% Similarity=0.388 Sum_probs=33.2
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHHHHHhcCC-------CCcEEEEeeccC
Q 039294 84 PFSVLFVCLGNICRSPAAEGVFRDIVKKRGI-------DSKFNIDSAGTI 126 (253)
Q Consensus 84 ~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl-------~~~i~V~SAGt~ 126 (253)
....++||+|-.|..-=|+.+++++-++-|. .+.|.+...|..
T Consensus 76 gk~~I~VC~gt~C~~~Ga~~i~~~l~~~L~i~~gett~Dg~~tl~~~~Cl 125 (181)
T 3i9v_2 76 GKYHLQVCATLSCKLAGAEELWDYLTETLGIGPGEVTPDGLFSVQKVECL 125 (181)
T ss_dssp CSEEEEEECSHHHHTTTHHHHHHHHHHHHTCCTTCCCTTSCEEEEEESCC
T ss_pred CCEEEEECCCchhhhcCHHHHHHHHHHHhCcCCCCcCCCCcEEEEEcCCC
Confidence 3579999999999999899998888776543 245777777764
No 94
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=28.09 E-value=79 Score=26.52 Aligned_cols=55 Identities=18% Similarity=0.179 Sum_probs=37.0
Q ss_pred CCCcEEEEEcCCCchHHH----HHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcC
Q 039294 82 TKPFSVLFVCLGNICRSP----AAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRG 146 (253)
Q Consensus 82 ~~~~~VLFVCtgNiCRSp----MAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~G 146 (253)
.++++|-++|..+.+.++ +|+.+.+.+++ + ++.+.++|-.. | +...+.+...+.|
T Consensus 7 ~~m~~V~V~ggsr~~~~~~~~~~A~~lg~~LA~-~----g~~lV~GGg~~---G--lM~aa~~gA~~~G 65 (216)
T 1ydh_A 7 SRFRKICVFCGSHSGHREVFSDAAIELGNELVK-R----KIDLVYGGGSV---G--LMGLISRRVYEGG 65 (216)
T ss_dssp CSCSEEEEECCSCCCSSHHHHHHHHHHHHHHHH-T----TCEEEECCCSS---H--HHHHHHHHHHHTT
T ss_pred CCCCeEEEEeCCCCCCCcHHHHHHHHHHHHHHH-C----CCEEEECCCcc---c--HhHHHHHHHHHcC
Confidence 345679999998888755 77888877775 2 47788887432 2 5555555555554
No 95
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=28.00 E-value=21 Score=31.37 Aligned_cols=41 Identities=15% Similarity=0.033 Sum_probs=30.9
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCC
Q 039294 83 KPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDY 128 (253)
Q Consensus 83 ~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~ 128 (253)
+...|+++|.+..+||..|..+|+.+ |+ .++.+..+|+..|
T Consensus 110 ~~~~vVvyc~~g~~~a~~a~~~L~~~----G~-~~V~~L~GG~~~W 150 (318)
T 3hzu_A 110 RDDTVVIYGDKSNWWAAYALWVFTLF----GH-ADVRLLNGGRDLW 150 (318)
T ss_dssp TTCEEEEECSGGGHHHHHHHHHHHHT----TC-SCEEEETTHHHHH
T ss_pred CCCeEEEECCCCCccHHHHHHHHHHc----CC-CceEEccCCHHHH
Confidence 44689999998889998888777654 54 3578888887554
No 96
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=26.99 E-value=1.4e+02 Score=25.68 Aligned_cols=72 Identities=8% Similarity=0.016 Sum_probs=40.0
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCCC---C--CCccc-C
Q 039294 83 KPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIEI---T--SISRP-I 156 (253)
Q Consensus 83 ~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID~---s--h~sr~-L 156 (253)
.++||.||-.||.. +.||..|++. |. .+.+.. .++..++.+++.|... + ...+. -
T Consensus 13 ~~~kI~iIG~G~mG-~ala~~L~~~-----G~--~V~~~~-----------r~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 73 (335)
T 1z82_A 13 MEMRFFVLGAGSWG-TVFAQMLHEN-----GE--EVILWA-----------RRKEIVDLINVSHTSPYVEESKITVRATN 73 (335)
T ss_dssp -CCEEEEECCSHHH-HHHHHHHHHT-----TC--EEEEEC-----------SSHHHHHHHHHHSCBTTBTTCCCCSEEES
T ss_pred cCCcEEEECcCHHH-HHHHHHHHhC-----CC--eEEEEe-----------CCHHHHHHHHHhCCcccCCCCeeeEEEeC
Confidence 34899999999887 4666665542 21 233221 2344566677766421 0 00111 1
Q ss_pred CcCCCCCCcEEEEEecc
Q 039294 157 RPSDFKDFDLILAMDKQ 173 (253)
Q Consensus 157 t~~~l~~aDlIItM~~~ 173 (253)
+..++..+|+||.+...
T Consensus 74 ~~~~~~~aDvVil~vk~ 90 (335)
T 1z82_A 74 DLEEIKKEDILVIAIPV 90 (335)
T ss_dssp CGGGCCTTEEEEECSCG
T ss_pred CHHHhcCCCEEEEECCH
Confidence 12226789999988874
No 97
>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}
Probab=26.39 E-value=26 Score=30.48 Aligned_cols=40 Identities=18% Similarity=0.435 Sum_probs=29.8
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCC
Q 039294 83 KPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDY 128 (253)
Q Consensus 83 ~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~ 128 (253)
+..+|++.|++. .||..|..+|+.. |+ .++.+..+|+..|
T Consensus 180 kdk~IVvyC~~G-~RS~~Aa~~L~~~----Gf-~nV~~L~GGi~aW 219 (265)
T 4f67_A 180 KDKKIAMFCTGG-IRCEKTTAYMKEL----GF-EHVYQLHDGILNY 219 (265)
T ss_dssp TTSCEEEECSSS-HHHHHHHHHHHHH----TC-SSEEEETTHHHHH
T ss_pred CCCeEEEEeCCC-hHHHHHHHHHHHc----CC-CCEEEecCHHHHH
Confidence 346799999975 4888888887654 55 3677788888765
No 98
>1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle, phosphorylation, plant, hydrolase; NMR {Arabidopsis thaliana} SCOP: c.46.1.1
Probab=26.06 E-value=37 Score=26.36 Aligned_cols=45 Identities=16% Similarity=0.226 Sum_probs=29.3
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHHHH----HhcCCCCcEEEEeeccCCC
Q 039294 83 KPFSVLFVCLGNICRSPAAEGVFRDIV----KKRGIDSKFNIDSAGTIDY 128 (253)
Q Consensus 83 ~~~~VLFVCtgNiCRSpMAEal~r~~~----~~~gl~~~i~V~SAGt~~~ 128 (253)
+...|+|+|...--||..|...+...+ .+.|+ .++.+.-+|+..|
T Consensus 84 ~~~~iVvyC~~~G~rs~~aa~~L~~~l~~~L~~~G~-~~V~~L~GG~~~W 132 (152)
T 1t3k_A 84 DKDTLVFHSALSQVRGPTCARRLVNYLDEKKEDTGI-KNIMILERGFNGW 132 (152)
T ss_dssp SCCEEEESSSCCSSSHHHHHHHHHHHHHHSSSCCCS-SEEEEESSTTHHH
T ss_pred CCCEEEEEcCCCCcchHHHHHHHHHHHHHHHHhcCC-CcEEEEcCCHHHH
Confidence 346799999733358888887765533 33465 3577777887654
No 99
>1c25_A CDC25A; hydrolase, cell cycle phosphatase,dual specificity protein phosphatase, CDK2; 2.30A {Homo sapiens} SCOP: c.46.1.1
Probab=25.08 E-value=34 Score=26.44 Aligned_cols=40 Identities=18% Similarity=0.214 Sum_probs=26.2
Q ss_pred EEEcCCCchHHHHHHHHHHHHH------HhcCCCCcEEEEeeccCCC
Q 039294 88 LFVCLGNICRSPAAEGVFRDIV------KKRGIDSKFNIDSAGTIDY 128 (253)
Q Consensus 88 LFVCtgNiCRSpMAEal~r~~~------~~~gl~~~i~V~SAGt~~~ 128 (253)
+|.|...-.||+.|..+++... .+.|+ .++.+..+|+..|
T Consensus 93 v~yC~~sg~rs~~aa~~L~~~~~~~~~l~~~G~-~~v~~l~GG~~~W 138 (161)
T 1c25_A 93 VFHCEFSSERGPRMCRYVRERDRLGNEYPKLHY-PELYVLKGGYKEF 138 (161)
T ss_dssp EEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSS-CCEEEETTHHHHH
T ss_pred EEEcCCCCcchHHHHHHHHHHHHhhhhccccCC-ceEEEEcCCHHHH
Confidence 4568634569999988887642 22355 3577778887655
No 100
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=25.00 E-value=1.4e+02 Score=25.93 Aligned_cols=73 Identities=19% Similarity=0.157 Sum_probs=41.6
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCCcC-CC
Q 039294 83 KPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIEITSISRPIRPS-DF 161 (253)
Q Consensus 83 ~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID~sh~sr~Lt~~-~l 161 (253)
..++|.||-.|++.+| ||.++.+ .|... +|. |. ..++...+.+.+.|+-.. ....+ .+ .+
T Consensus 32 ~~~kI~IIG~G~mG~s-lA~~l~~-----~G~~~--~V~--~~-------dr~~~~~~~a~~~G~~~~-~~~~~-~~~~~ 92 (314)
T 3ggo_A 32 SMQNVLIVGVGFMGGS-FAKSLRR-----SGFKG--KIY--GY-------DINPESISKAVDLGIIDE-GTTSI-AKVED 92 (314)
T ss_dssp SCSEEEEESCSHHHHH-HHHHHHH-----TTCCS--EEE--EE-------CSCHHHHHHHHHTTSCSE-EESCT-TGGGG
T ss_pred CCCEEEEEeeCHHHHH-HHHHHHh-----CCCCC--EEE--EE-------ECCHHHHHHHHHCCCcch-hcCCH-HHHhh
Confidence 3479999999998865 4444443 23211 332 22 145666677778886310 01111 12 46
Q ss_pred CCCcEEEEEeccc
Q 039294 162 KDFDLILAMDKQN 174 (253)
Q Consensus 162 ~~aDlIItM~~~~ 174 (253)
.++|+||......
T Consensus 93 ~~aDvVilavp~~ 105 (314)
T 3ggo_A 93 FSPDFVMLSSPVR 105 (314)
T ss_dssp GCCSEEEECSCGG
T ss_pred ccCCEEEEeCCHH
Confidence 7899999887643
No 101
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=24.65 E-value=1.1e+02 Score=26.97 Aligned_cols=84 Identities=10% Similarity=0.157 Sum_probs=41.6
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCC-CCHHHHHHHHHcCCCCCCCcccCCcCC-
Q 039294 83 KPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNP-ADSRMRAASKRRGIEITSISRPIRPSD- 160 (253)
Q Consensus 83 ~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~p-vdp~Av~vL~e~GID~sh~sr~Lt~~~- 160 (253)
++|||+|..|.+.. -..|+.++.. |. +-+-|.+---.+..-|.. ....+.+..+++||+.- .+..+...+
T Consensus 1 ~~mrivf~Gtp~fa-----~~~L~~L~~~-~~-~v~~Vvt~pd~~~grg~~l~~~~v~~~A~~~gIpv~-~~~~~~~~~~ 72 (314)
T 3tqq_A 1 MSLKIVFAGTPQFA-----VPTLRALIDS-SH-RVLAVYTQPDRPSGRGQKIMESPVKEIARQNEIPII-QPFSLRDEVE 72 (314)
T ss_dssp CCCEEEEEECSGGG-----HHHHHHHHHS-SS-EEEEEECCCC----------CCHHHHHHHHTTCCEE-CCSCSSSHHH
T ss_pred CCcEEEEECCCHHH-----HHHHHHHHHC-CC-eEEEEEeCCCCccccCCccCCCHHHHHHHHcCCCEE-CcccCCCHHH
Confidence 35899999998654 3445555432 21 122333311111000111 23446778888999941 122232111
Q ss_pred -----CCCCcEEEEEeccc
Q 039294 161 -----FKDFDLILAMDKQN 174 (253)
Q Consensus 161 -----l~~aDlIItM~~~~ 174 (253)
-.+.|+||+..-..
T Consensus 73 ~~~l~~~~~Dliv~~~~~~ 91 (314)
T 3tqq_A 73 QEKLIAMNADVMVVVAYGL 91 (314)
T ss_dssp HHHHHTTCCSEEEEESCCS
T ss_pred HHHHHhcCCCEEEEcCccc
Confidence 13689999997643
No 102
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=24.65 E-value=2.2e+02 Score=24.29 Aligned_cols=70 Identities=7% Similarity=0.115 Sum_probs=41.0
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCH-HHHHHHHHcCCCC-CCCcccCCcCCC
Q 039294 84 PFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADS-RMRAASKRRGIEI-TSISRPIRPSDF 161 (253)
Q Consensus 84 ~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp-~Av~vL~e~GID~-sh~sr~Lt~~~l 161 (253)
++||.||-.||+.+.-++.++.+. .++++. . . . .++ .+.++.++.|++. -... .+.+
T Consensus 2 ~~~igiIG~G~ig~~~~~~~l~~~--------~~~~l~-v-~-d------~~~~~~~~~a~~~g~~~~~~~~----~~~l 60 (323)
T 1xea_A 2 SLKIAMIGLGDIAQKAYLPVLAQW--------PDIELV-L-C-T------RNPKVLGTLATRYRVSATCTDY----RDVL 60 (323)
T ss_dssp CEEEEEECCCHHHHHTHHHHHTTS--------TTEEEE-E-E-C------SCHHHHHHHHHHTTCCCCCSST----TGGG
T ss_pred CcEEEEECCCHHHHHHHHHHHHhC--------CCceEE-E-E-e------CCHHHHHHHHHHcCCCccccCH----HHHh
Confidence 479999999998765566555321 135555 1 1 1 233 4455666778862 1111 1223
Q ss_pred -CCCcEEEEEeccc
Q 039294 162 -KDFDLILAMDKQN 174 (253)
Q Consensus 162 -~~aDlIItM~~~~ 174 (253)
.+.|+|+..+..+
T Consensus 61 ~~~~D~V~i~tp~~ 74 (323)
T 1xea_A 61 QYGVDAVMIHAATD 74 (323)
T ss_dssp GGCCSEEEECSCGG
T ss_pred hcCCCEEEEECCch
Confidence 5789999988643
No 103
>3pu6_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.60A {Wolinella succinogenes}
Probab=24.07 E-value=48 Score=26.34 Aligned_cols=49 Identities=10% Similarity=0.110 Sum_probs=32.4
Q ss_pred cEEEEEcCCCchHH------HHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCC
Q 039294 85 FSVLFVCLGNICRS------PAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIE 148 (253)
Q Consensus 85 ~~VLFVCtgNiCRS------pMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID 148 (253)
||||++|.||+-|+ -.+|.+- . .++ +|++.-+|+.+.+ ....+++.|.|
T Consensus 3 m~ilVlGiGN~L~gDDG~G~~v~~~L~----~--~~p-~v~vid~Gt~~~~--------l~~~l~~~~~d 57 (157)
T 3pu6_A 3 LKKVLLCVGNELRGDDGVAIALGRLVE----E--QMP-EWSVFFGYDTPES--------EFGKLRELAPD 57 (157)
T ss_dssp CCEEEEEECCTTBGGGGHHHHHHHHHH----H--HCT-TEEEEEEETCGGG--------GHHHHHHHCCS
T ss_pred CCEEEEEECCcccccccHHHHHHHHHH----h--hCC-CeEEEECCCCHHH--------HHHHHHhcCCC
Confidence 68999999999886 3444443 1 233 6999999986522 34555654554
No 104
>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens}
Probab=23.38 E-value=80 Score=22.81 Aligned_cols=43 Identities=9% Similarity=0.159 Sum_probs=29.5
Q ss_pred cEEEEEcCCCchHHHHHHHHHHHHHHhc--CCCCcEEEEeeccCCCC
Q 039294 85 FSVLFVCLGNICRSPAAEGVFRDIVKKR--GIDSKFNIDSAGTIDYH 129 (253)
Q Consensus 85 ~~VLFVCtgNiCRSpMAEal~r~~~~~~--gl~~~i~V~SAGt~~~~ 129 (253)
..|+|+|.+. .||..|..+|+.+..-. |. .++.+..+|+..|.
T Consensus 73 ~~ivv~C~~G-~rs~~a~~~L~~~gg~~~~G~-~~v~~l~GG~~~W~ 117 (127)
T 3i2v_A 73 VPIYVICKLG-NDSQKAVKILQSLSAAQELDP-LTVRDVVGGLMAWA 117 (127)
T ss_dssp EEEEEECSSS-SHHHHHHHHHHHHHHTTSSSC-EEEEEETTHHHHHH
T ss_pred CeEEEEcCCC-CcHHHHHHHHHHhhccccCCC-ceEEEecCCHHHHH
Confidence 4799999765 58999988888763111 21 25677788887653
No 105
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=23.15 E-value=86 Score=22.64 Aligned_cols=47 Identities=15% Similarity=0.186 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCCC
Q 039294 98 SPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIEI 149 (253)
Q Consensus 98 SpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID~ 149 (253)
||-++..++.++.+ ..+.|+|-|+.... +=|--..+.+.|+++||+.
T Consensus 4 s~~~~~~v~~~i~~----~~Vvvy~k~t~~~p-~Cp~C~~ak~~L~~~gi~~ 50 (109)
T 3ipz_A 4 TPQLKDTLEKLVNS----EKVVLFMKGTRDFP-MCGFSNTVVQILKNLNVPF 50 (109)
T ss_dssp CHHHHHHHHHHHTS----SSEEEEESBCSSSB-SSHHHHHHHHHHHHTTCCC
T ss_pred CHHHHHHHHHHHcc----CCEEEEEecCCCCC-CChhHHHHHHHHHHcCCCc
Confidence 45556667777764 47999999974322 4446678899999999984
No 106
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=22.99 E-value=2.5e+02 Score=24.77 Aligned_cols=73 Identities=10% Similarity=-0.014 Sum_probs=44.6
Q ss_pred CCCCcEEEEEcCC---CchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCCCC--CCccc
Q 039294 81 TTKPFSVLFVCLG---NICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIEIT--SISRP 155 (253)
Q Consensus 81 ~~~~~~VLFVCtg---NiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID~s--h~sr~ 155 (253)
.-...||.||.-+ |.|||-|- .+. +. .++++.=++-. |-.+++..++.+++.|..+. +..
T Consensus 148 ~l~glkva~vGD~~~~rva~Sl~~-----~~~-~~---~G~~v~~~~P~----~~~~~~~~~~~~~~~g~~~~~~~d~-- 212 (306)
T 4ekn_B 148 RIDGIKIAFVGDLKYGRTVHSLVY-----ALS-LF---ENVEMYFVSPK----ELRLPKDIIEDLKAKNIKFYEKESL-- 212 (306)
T ss_dssp CSTTCEEEEESCTTTCHHHHHHHH-----HHH-TS---SSCEEEEECCG----GGCCCHHHHHHHHHTTCCEEEESCG--
T ss_pred CcCCCEEEEEcCCCCCcHHHHHHH-----HHH-hc---CCCEEEEECCc----ccccCHHHHHHHHHcCCEEEEEcCH--
Confidence 4456899999874 56666543 222 22 02455555532 33477888888888887742 222
Q ss_pred CCcCCCCCCcEEEEE
Q 039294 156 IRPSDFKDFDLILAM 170 (253)
Q Consensus 156 Lt~~~l~~aDlIItM 170 (253)
.+-++.+|+|++-
T Consensus 213 --~eav~~aDvvy~~ 225 (306)
T 4ekn_B 213 --DDLDDDIDVLYVT 225 (306)
T ss_dssp --GGCCTTCSEEEEC
T ss_pred --HHHhcCCCEEEeC
Confidence 2457889988864
No 107
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=22.81 E-value=1.2e+02 Score=26.77 Aligned_cols=85 Identities=15% Similarity=0.244 Sum_probs=43.8
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCC-CCHHHHHHHHHcCCCCCCCcccCCcCC
Q 039294 82 TKPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNP-ADSRMRAASKRRGIEITSISRPIRPSD 160 (253)
Q Consensus 82 ~~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~p-vdp~Av~vL~e~GID~sh~sr~Lt~~~ 160 (253)
++||||+|..|.... -..|+.++.. |. +-+-|.+---.+...|.. ..+.+.+..+++||+.- .+..+...+
T Consensus 2 ~~mmrIvf~Gtp~fa-----~~~L~~L~~~-~~-~v~~Vvt~pd~~~gRg~~l~~~pv~~~A~~~gIpv~-~~~~~~~~~ 73 (317)
T 3rfo_A 2 NAMIKVVFMGTPDFS-----VPVLRRLIED-GY-DVIGVVTQPDRPVGRKKVLTPTPVKVEAEKHGIPVL-QPLRIREKD 73 (317)
T ss_dssp CTTSEEEEECCSTTH-----HHHHHHHHHT-TC-EEEEEECCCCCEETTTTEECCCHHHHHHHHTTCCEE-CCSCTTSHH
T ss_pred CCceEEEEEeCCHHH-----HHHHHHHHHC-CC-cEEEEEeCCCcccCCCcccCCCHHHHHHHHcCCCEE-ccccCCCHH
Confidence 578999999998644 3445555542 21 123333321111000111 22347778889999941 122232111
Q ss_pred ----C--CCCcEEEEEeccc
Q 039294 161 ----F--KDFDLILAMDKQN 174 (253)
Q Consensus 161 ----l--~~aDlIItM~~~~ 174 (253)
+ .+.|+||+..-..
T Consensus 74 ~~~~l~~~~~Dliv~~~y~~ 93 (317)
T 3rfo_A 74 EYEKVLALEPDLIVTAAFGQ 93 (317)
T ss_dssp HHHHHHHHCCSEEEESSCCS
T ss_pred HHHHHHhcCCCEEEEcCchh
Confidence 1 3689999986543
No 108
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=22.75 E-value=37 Score=28.52 Aligned_cols=41 Identities=7% Similarity=-0.053 Sum_probs=29.4
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCC
Q 039294 83 KPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDY 128 (253)
Q Consensus 83 ~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~ 128 (253)
+...|+|+|.+..-||..|..+|+.+ |+ .++.+-.+|+..|
T Consensus 80 ~~~~vvvyc~~g~~~s~~a~~~L~~~----G~-~~v~~L~GG~~~w 120 (271)
T 1e0c_A 80 PEAVYVVYDDEGGGWAGRFIWLLDVI----GQ-QRYHYLNGGLTAW 120 (271)
T ss_dssp TTCEEEEECSSSSHHHHHHHHHHHHT----TC-CCEEEETTHHHHH
T ss_pred CCCeEEEEcCCCCccHHHHHHHHHHc----CC-CCeEEecCCHHHH
Confidence 34679999987766998887777654 54 3577777887554
No 109
>2eq7_C 2-oxoglutarate dehydrogenase E2 component; protein-protein complex, oxidoreductase; HET: FAD NAD; 1.80A {Thermus thermophilus}
Probab=22.15 E-value=64 Score=19.18 Aligned_cols=17 Identities=12% Similarity=0.163 Sum_probs=14.3
Q ss_pred CCHHHHHHHHHcCCCCC
Q 039294 134 ADSRMRAASKRRGIEIT 150 (253)
Q Consensus 134 vdp~Av~vL~e~GID~s 150 (253)
+.|.+.+.++++|||++
T Consensus 2 asP~ar~la~e~gidl~ 18 (40)
T 2eq7_C 2 AMPAAERLMQEKGVSPA 18 (40)
T ss_dssp CCHHHHHHHHHTTCCTT
T ss_pred CCcHHHHHHHHhCCChh
Confidence 46889999999999963
No 110
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=22.09 E-value=2.1e+02 Score=24.58 Aligned_cols=72 Identities=14% Similarity=0.139 Sum_probs=39.5
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCH-HHHHHHHHcCCCC-CCCcccCCcCC
Q 039294 83 KPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADS-RMRAASKRRGIEI-TSISRPIRPSD 160 (253)
Q Consensus 83 ~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp-~Av~vL~e~GID~-sh~sr~Lt~~~ 160 (253)
+++||.||-.|++.+. ++.++.+. .++++... .. .++ .+.+..++.|+.. .....-+..
T Consensus 3 ~~~rvgiiG~G~~g~~-~~~~l~~~--------~~~~l~av--~d------~~~~~~~~~a~~~g~~~~~~~~~~l~~-- 63 (344)
T 3euw_A 3 LTLRIALFGAGRIGHV-HAANIAAN--------PDLELVVI--AD------PFIEGAQRLAEANGAEAVASPDEVFAR-- 63 (344)
T ss_dssp CCEEEEEECCSHHHHH-HHHHHHHC--------TTEEEEEE--EC------SSHHHHHHHHHTTTCEEESSHHHHTTC--
T ss_pred CceEEEEECCcHHHHH-HHHHHHhC--------CCcEEEEE--EC------CCHHHHHHHHHHcCCceeCCHHHHhcC--
Confidence 3589999999998874 55555431 13554422 11 233 3445556667542 111111211
Q ss_pred CCCCcEEEEEeccc
Q 039294 161 FKDFDLILAMDKQN 174 (253)
Q Consensus 161 l~~aDlIItM~~~~ 174 (253)
.+.|+|+..+..+
T Consensus 64 -~~~D~V~i~tp~~ 76 (344)
T 3euw_A 64 -DDIDGIVIGSPTS 76 (344)
T ss_dssp -SCCCEEEECSCGG
T ss_pred -CCCCEEEEeCCch
Confidence 2689999888643
No 111
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=21.93 E-value=2.5e+02 Score=24.83 Aligned_cols=80 Identities=9% Similarity=0.104 Sum_probs=46.1
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCCC--CCCcccCCcCCC
Q 039294 84 PFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIEI--TSISRPIRPSDF 161 (253)
Q Consensus 84 ~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID~--sh~sr~Lt~~~l 161 (253)
++||-+|-.|++.+. .++++.+.-..-..+.+++++. ++.. +-..++.++.+++|++- +..-.-|..
T Consensus 26 klrvgiIG~G~ig~~-h~~~~~~~~~~~~~~~~~~elv--av~d-----~~~~~a~~~a~~~~~~~~y~d~~~ll~~--- 94 (412)
T 4gqa_A 26 RLNIGLIGSGFMGQA-HADAYRRAAMFYPDLPKRPHLY--ALAD-----QDQAMAERHAAKLGAEKAYGDWRELVND--- 94 (412)
T ss_dssp EEEEEEECCSHHHHH-HHHHHHHHHHHCTTSSSEEEEE--EEEC-----SSHHHHHHHHHHHTCSEEESSHHHHHHC---
T ss_pred cceEEEEcCcHHHHH-HHHHHHhccccccccCCCeEEE--EEEc-----CCHHHHHHHHHHcCCCeEECCHHHHhcC---
Confidence 589999999999874 6666665433222223345553 3322 12345667778889872 211122221
Q ss_pred CCCcEEEEEeccc
Q 039294 162 KDFDLILAMDKQN 174 (253)
Q Consensus 162 ~~aDlIItM~~~~ 174 (253)
.+.|+|+..+..+
T Consensus 95 ~~vD~V~I~tp~~ 107 (412)
T 4gqa_A 95 PQVDVVDITSPNH 107 (412)
T ss_dssp TTCCEEEECSCGG
T ss_pred CCCCEEEECCCcH
Confidence 3578998887643
No 112
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=21.74 E-value=83 Score=22.99 Aligned_cols=43 Identities=9% Similarity=0.050 Sum_probs=30.9
Q ss_pred HHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCCC
Q 039294 102 EGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIEI 149 (253)
Q Consensus 102 Eal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID~ 149 (253)
+..++.++.+ ..+.++|.|+.... +=|-...|.+.|+++||+.
T Consensus 6 ~~~v~~~i~~----~~Vvlf~kg~~~~~-~Cp~C~~ak~~L~~~gi~y 48 (111)
T 3zyw_A 6 NLRLKKLTHA----APCMLFMKGTPQEP-RCGFSKQMVEILHKHNIQF 48 (111)
T ss_dssp HHHHHHHHTS----SSEEEEESBCSSSB-SSHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHhc----CCEEEEEecCCCCC-cchhHHHHHHHHHHcCCCe
Confidence 4455566653 46999999985433 5556678899999999974
No 113
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=21.66 E-value=1.9e+02 Score=20.46 Aligned_cols=77 Identities=12% Similarity=0.065 Sum_probs=42.6
Q ss_pred CcEEEEEcCC---CchHHHHHHHHHHHHHHhcCC-CCcEEEEeeccCCCCCCC-C----CCHHHHHHHHHcCCCCC----
Q 039294 84 PFSVLFVCLG---NICRSPAAEGVFRDIVKKRGI-DSKFNIDSAGTIDYHEGN-P----ADSRMRAASKRRGIEIT---- 150 (253)
Q Consensus 84 ~~~VLFVCtg---NiCRSpMAEal~r~~~~~~gl-~~~i~V~SAGt~~~~~G~-p----vdp~Av~vL~e~GID~s---- 150 (253)
|+|++||.++ +.-|...|=.++.......|. .-.+-...-|+.....+. | --....+.|.+.|+.+-
T Consensus 1 M~k~~ii~~~~p~~~~~~~~al~~a~~~~~~~g~~~v~vff~~dgV~~~~~~~~~~~~~~~~~~l~~l~~~gv~v~~C~~ 80 (117)
T 1jx7_A 1 MQKIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMSDAVTAGLRGQKPGEGYNIQQMLEILTAQNVPVKLCKT 80 (117)
T ss_dssp CCEEEEEECCCTTTCSHHHHHHHHHHHHHHHCTTCEEEEEECGGGGGGGBSCCCCSSSCCHHHHHHHHHHTTCCEEEEHH
T ss_pred CcEEEEEEcCCCCCcHHHHHHHHHHHHHHhcCCCccEEEEEEchHHHHHhcCCCCCcCCCHHHHHHHHHHCCCEEEEeHH
Confidence 4588888888 467777777777766654242 223444456654322121 1 11345666778898841
Q ss_pred -CCcccCCcCC
Q 039294 151 -SISRPIRPSD 160 (253)
Q Consensus 151 -h~sr~Lt~~~ 160 (253)
-..+.+++++
T Consensus 81 ~l~~rGl~~~~ 91 (117)
T 1jx7_A 81 CTDGRGISTLP 91 (117)
T ss_dssp HHHHTTCTTSC
T ss_pred HHHHcCCChhh
Confidence 2445565443
No 114
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=20.78 E-value=1.6e+02 Score=25.51 Aligned_cols=74 Identities=12% Similarity=0.112 Sum_probs=38.8
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCCCC--CCcccCCcCCC
Q 039294 84 PFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIEIT--SISRPIRPSDF 161 (253)
Q Consensus 84 ~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID~s--h~sr~Lt~~~l 161 (253)
++||.||-.|++.+. ++.++.+ +. .++++. |+.. .-...+.++.++.|++.. .....+-. -
T Consensus 2 ~~rigiIG~G~~g~~-~~~~l~~----~~---~~~~l~--av~d-----~~~~~~~~~~~~~g~~~~~~~~~~~ll~--~ 64 (344)
T 3mz0_A 2 SLRIGVIGTGAIGKE-HINRITN----KL---SGAEIV--AVTD-----VNQEAAQKVVEQYQLNATVYPNDDSLLA--D 64 (344)
T ss_dssp CEEEEEECCSHHHHH-HHHHHHH----TC---SSEEEE--EEEC-----SSHHHHHHHHHHTTCCCEEESSHHHHHH--C
T ss_pred eEEEEEECccHHHHH-HHHHHHh----hC---CCcEEE--EEEc-----CCHHHHHHHHHHhCCCCeeeCCHHHHhc--C
Confidence 479999999997763 4444432 11 235543 2221 112345566677886421 11111100 1
Q ss_pred CCCcEEEEEeccc
Q 039294 162 KDFDLILAMDKQN 174 (253)
Q Consensus 162 ~~aDlIItM~~~~ 174 (253)
.+.|+|+..+..+
T Consensus 65 ~~~D~V~i~tp~~ 77 (344)
T 3mz0_A 65 ENVDAVLVTSWGP 77 (344)
T ss_dssp TTCCEEEECSCGG
T ss_pred CCCCEEEECCCch
Confidence 3589999887643
No 115
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=20.74 E-value=1.2e+02 Score=25.29 Aligned_cols=55 Identities=16% Similarity=0.184 Sum_probs=37.3
Q ss_pred CCCcEEEEEcCCCchHHH----HHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcC
Q 039294 82 TKPFSVLFVCLGNICRSP----AAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRG 146 (253)
Q Consensus 82 ~~~~~VLFVCtgNiCRSp----MAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~G 146 (253)
.++++|-++|-.+.+..+ +|+.+.+.+++. ++.+.|+|-.. | +...+.+...+.|
T Consensus 11 ~~m~~IaV~cGS~~~~~~~y~~~A~~lg~~LA~~-----G~~vVsGGg~~---G--iM~aa~~gAl~~G 69 (215)
T 2a33_A 11 SKFRRICVFCGSSQGKKSSYQDAAVDLGNELVSR-----NIDLVYGGGSI---G--LMGLVSQAVHDGG 69 (215)
T ss_dssp CSCSEEEEECCSSCCSSHHHHHHHHHHHHHHHHT-----TCEEEECCCSS---H--HHHHHHHHHHHTT
T ss_pred CCCCeEEEEECCCCCCchHHHHHHHHHHHHHHHC-----CCEEEECCChh---h--HhHHHHHHHHHcC
Confidence 345689999988887654 678888877752 57888888432 2 5566655555554
No 116
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=20.73 E-value=1.3e+02 Score=22.32 Aligned_cols=45 Identities=9% Similarity=0.126 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCC
Q 039294 99 PAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIE 148 (253)
Q Consensus 99 pMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID 148 (253)
+-+...++.++.+ ..+.|+|-|+.... +=|-...+.++|.++||+
T Consensus 3 ~~~~~~v~~~i~~----~~Vvvfsk~t~~~p-~Cp~C~~ak~lL~~~gv~ 47 (121)
T 3gx8_A 3 TEIRKAIEDAIES----APVVLFMKGTPEFP-KCGFSRATIGLLGNQGVD 47 (121)
T ss_dssp HHHHHHHHHHHHS----CSEEEEESBCSSSB-CTTHHHHHHHHHHHHTBC
T ss_pred HHHHHHHHHHhcc----CCEEEEEeccCCCC-CCccHHHHHHHHHHcCCC
Confidence 4456677777764 46999999974322 445678899999999988
No 117
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=20.69 E-value=3.1e+02 Score=24.14 Aligned_cols=73 Identities=11% Similarity=0.000 Sum_probs=44.9
Q ss_pred CCCcEEEEEcCC---CchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCCC--CCCcccC
Q 039294 82 TKPFSVLFVCLG---NICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIEI--TSISRPI 156 (253)
Q Consensus 82 ~~~~~VLFVCtg---NiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID~--sh~sr~L 156 (253)
-+..+|.||.-+ |++||-|- .+. +. .+++|.=+|-.. -.+++..++.+++.|..+ .+..
T Consensus 152 l~gl~va~vGD~~~~rva~Sl~~-----~~~-~~---~g~~v~~~~P~~----~~~~~~~~~~~~~~g~~~~~~~d~--- 215 (310)
T 3csu_A 152 LDNLHVAMVGDLKYGRTVHSLTQ-----ALA-KF---DGNRFYFIAPDA----LAMPQYILDMLDEKGIAWSLHSSI--- 215 (310)
T ss_dssp SSSCEEEEESCTTTCHHHHHHHH-----HHH-TS---SSCEEEEECCGG----GCCCHHHHHHHHHTTCCEEECSCG---
T ss_pred cCCcEEEEECCCCCCchHHHHHH-----HHH-hC---CCCEEEEECCcc----cccCHHHHHHHHHcCCeEEEEcCH---
Confidence 345899999874 66666543 222 22 025666666433 346777888888888763 2222
Q ss_pred CcCCCCCCcEEEEEe
Q 039294 157 RPSDFKDFDLILAMD 171 (253)
Q Consensus 157 t~~~l~~aDlIItM~ 171 (253)
.+.++++|+|++-.
T Consensus 216 -~eav~~aDvvyt~~ 229 (310)
T 3csu_A 216 -EEVMAEVDILYMTR 229 (310)
T ss_dssp -GGTTTTCSEEEECC
T ss_pred -HHHhcCCCEEEECC
Confidence 24578899877753
No 118
>2a2k_A M-phase inducer phosphatase 2; dual specificity, substrate trapping, active site mutant, hydrolase; 1.52A {Homo sapiens} PDB: 2ifv_A 1ymd_A 1ym9_A 1ymk_A 1yml_A 1ys0_A 1cwt_A 2ifd_A
Probab=20.62 E-value=47 Score=26.01 Aligned_cols=44 Identities=14% Similarity=0.092 Sum_probs=28.6
Q ss_pred cEEEEE--cCCCchHHHHHHHHHHHHH------HhcCCCCcEEEEeeccCCCC
Q 039294 85 FSVLFV--CLGNICRSPAAEGVFRDIV------KKRGIDSKFNIDSAGTIDYH 129 (253)
Q Consensus 85 ~~VLFV--CtgNiCRSpMAEal~r~~~------~~~gl~~~i~V~SAGt~~~~ 129 (253)
..|++| |...-.||+.|..+|+... ...|+ .++.+..+|+..|.
T Consensus 90 ~~ivvv~yC~~~g~rs~~aa~~L~~~~~~~~~l~~~G~-~~V~~L~GG~~~W~ 141 (175)
T 2a2k_A 90 KRVILIFHSEFSSERGPRMCRFIRERDRAVNDYPSLYY-PEMYILKGGYKEFF 141 (175)
T ss_dssp CEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSC-CCEEEETTHHHHHT
T ss_pred CCeEEEEECCCCCCccHHHHHHHHHhhhhhhhhhhcCC-ceEEEEcCCHHHHH
Confidence 456666 6533459999988887641 12355 35778888887663
No 119
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=20.36 E-value=1.6e+02 Score=25.33 Aligned_cols=74 Identities=9% Similarity=0.065 Sum_probs=43.9
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEeeccCCCCCCCCCCHHHHHHHHHcCCCC--CCCcccCCcC
Q 039294 82 TKPFSVLFVCLGNICRSPAAEGVFRDIVKKRGIDSKFNIDSAGTIDYHEGNPADSRMRAASKRRGIEI--TSISRPIRPS 159 (253)
Q Consensus 82 ~~~~~VLFVCtgNiCRSpMAEal~r~~~~~~gl~~~i~V~SAGt~~~~~G~pvdp~Av~vL~e~GID~--sh~sr~Lt~~ 159 (253)
..|+||-+|-.|++.|.-++.++.+. .++++.. +.. +-..++.++.+++|++- +..-.-|..
T Consensus 21 ~~mirigiIG~G~ig~~~~~~~~~~~--------~~~~lva--v~d-----~~~~~a~~~a~~~g~~~~y~d~~ell~~- 84 (350)
T 4had_A 21 QSMLRFGIISTAKIGRDNVVPAIQDA--------ENCVVTA--IAS-----RDLTRAREMADRFSVPHAFGSYEEMLAS- 84 (350)
T ss_dssp -CCEEEEEESCCHHHHHTHHHHHHHC--------SSEEEEE--EEC-----SSHHHHHHHHHHHTCSEEESSHHHHHHC-
T ss_pred cCccEEEEEcChHHHHHHHHHHHHhC--------CCeEEEE--EEC-----CCHHHHHHHHHHcCCCeeeCCHHHHhcC-
Confidence 35689999999999887666555321 2455542 221 12245667777889872 211112221
Q ss_pred CCCCCcEEEEEecc
Q 039294 160 DFKDFDLILAMDKQ 173 (253)
Q Consensus 160 ~l~~aDlIItM~~~ 173 (253)
.+.|.|+..+..
T Consensus 85 --~~iDaV~I~tP~ 96 (350)
T 4had_A 85 --DVIDAVYIPLPT 96 (350)
T ss_dssp --SSCSEEEECSCG
T ss_pred --CCCCEEEEeCCC
Confidence 357999888764
No 120
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=20.24 E-value=59 Score=27.54 Aligned_cols=24 Identities=13% Similarity=0.162 Sum_probs=19.8
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHH
Q 039294 83 KPFSVLFVCLGNICRSPAAEGVFRD 107 (253)
Q Consensus 83 ~~~~VLFVCtgNiCRSpMAEal~r~ 107 (253)
++|||.||-.|++. +.||..|.+.
T Consensus 7 ~~m~I~iiG~G~mG-~~~a~~L~~~ 30 (317)
T 2qyt_A 7 QPIKIAVFGLGGVG-GYYGAMLALR 30 (317)
T ss_dssp CCEEEEEECCSHHH-HHHHHHHHHH
T ss_pred CCCEEEEECcCHHH-HHHHHHHHhC
Confidence 44799999999999 6888887754
Done!