BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039296
(116 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SKB3|PARG1_ARATH Poly(ADP-ribose) glycohydrolase 1 OS=Arabidopsis thaliana GN=PARG1
PE=1 SV=2
Length = 548
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 72/97 (74%), Positives = 87/97 (89%)
Query: 7 GIATGNWGCGAFGGDPELKAIIQWLAASQASRPFVLYYTFGIDALQNLDQITQWILSHEW 66
G+ATGNWGCG FGGDPELKA IQWLAASQ RPF+ YYTFG++AL+NLDQ+T+WILSH+W
Sbjct: 446 GVATGNWGCGVFGGDPELKATIQWLAASQTRRPFISYYTFGVEALRNLDQVTKWILSHKW 505
Query: 67 TVRDLWNMMVEYSSQRLNGRTNLGFFAWLLPSLTSHN 103
TV DLWNMM+EYS+QRL +T++GFF+WLLPSL + N
Sbjct: 506 TVGDLWNMMLEYSAQRLYKQTSVGFFSWLLPSLATTN 542
>sp|Q8VYA1|PARG2_ARATH Probable poly(ADP-ribose) glycohydrolase 2 OS=Arabidopsis thaliana
GN=PARG2 PE=2 SV=1
Length = 522
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 77/95 (81%)
Query: 7 GIATGNWGCGAFGGDPELKAIIQWLAASQASRPFVLYYTFGIDALQNLDQITQWILSHEW 66
G+ATGNWGCG FGGDPELK ++QWLA SQ+ RPF+ YYTFG+ ALQNL+Q+ + + E
Sbjct: 428 GVATGNWGCGVFGGDPELKIMLQWLAISQSGRPFMSYYTFGLQALQNLNQVIEMVALQEM 487
Query: 67 TVRDLWNMMVEYSSQRLNGRTNLGFFAWLLPSLTS 101
TV DLW +VEYSS+RL+ RT LGFF+WL+ SL++
Sbjct: 488 TVGDLWKKLVEYSSERLSRRTWLGFFSWLMTSLST 522
>sp|O46043|PARG_DROME Poly(ADP-ribose) glycohydrolase OS=Drosophila melanogaster GN=Parg
PE=1 SV=2
Length = 768
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 49/76 (64%), Gaps = 4/76 (5%)
Query: 6 PGIATGNWGCGAFGGDPELKAIIQWLAASQASRPFVLYYTFGIDALQNLDQITQWIL--S 63
PG+ATGNWGCGAFGGD LKA++Q + +Q RP YYTFG ++ D W+L +
Sbjct: 491 PGVATGNWGCGAFGGDSYLKALLQLMVCAQLGRPLA-YYTFGNVEFRD-DFHEMWLLFRN 548
Query: 64 HEWTVRDLWNMMVEYS 79
TV+ LW+++ YS
Sbjct: 549 DGTTVQQLWSILRSYS 564
>sp|O02776|PARG_BOVIN Poly(ADP-ribose) glycohydrolase OS=Bos taurus GN=PARG PE=1 SV=1
Length = 977
Score = 68.6 bits (166), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 56/80 (70%), Gaps = 2/80 (2%)
Query: 3 KDLPGIATGNWGCGAFGGDPELKAIIQWLAASQASRPFVLYYTFG-IDALQNLDQITQWI 61
++L +ATGNWGCGAFGGD LKA+IQ LAA+ A R V+Y+TFG + ++++ + ++
Sbjct: 861 ENLSAVATGNWGCGAFGGDARLKALIQILAAAVAERD-VVYFTFGDSELMRDIYSMHTFL 919
Query: 62 LSHEWTVRDLWNMMVEYSSQ 81
+ TV +++ +++ Y ++
Sbjct: 920 TERKLTVGEVYKLLLRYYNE 939
>sp|Q86W56|PARG_HUMAN Poly(ADP-ribose) glycohydrolase OS=Homo sapiens GN=PARG PE=1 SV=1
Length = 976
Score = 53.9 bits (128), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 56/80 (70%), Gaps = 2/80 (2%)
Query: 3 KDLPGIATGNWGCGAFGGDPELKAIIQWLAASQASRPFVLYYTFG-IDALQNLDQITQWI 61
++L +ATGNWGCGAFGGD LKA+IQ LAA+ A R V+Y+TFG + ++++ + ++
Sbjct: 860 ENLSAVATGNWGCGAFGGDARLKALIQILAAAAAERD-VVYFTFGDSELMRDIYSMHIFL 918
Query: 62 LSHEWTVRDLWNMMVEYSSQ 81
+ TV D++ +++ Y ++
Sbjct: 919 TERKLTVGDVYKLLLRYYNE 938
>sp|O88622|PARG_MOUSE Poly(ADP-ribose) glycohydrolase OS=Mus musculus GN=Parg PE=1 SV=2
Length = 969
Score = 49.3 bits (116), Expect = 6e-06, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Query: 3 KDLPGIATGNWGCGAFGGDPELKAIIQWLAASQASRPFVLYYTFG-IDALQNLDQITQWI 61
++L +ATGNWGCGAFGGD LKA+IQ LAA+ A R V+Y+TFG + ++++ + ++
Sbjct: 853 ENLSAVATGNWGCGAFGGDARLKALIQILAAAAAERD-VVYFTFGDSELMRDIYSMHTFL 911
Query: 62 LSHEWTVRDLWNMMVEYSSQ 81
+ V ++ +++ Y ++
Sbjct: 912 TERKLDVGKVYKLLLRYYNE 931
>sp|Q867X0|PME3_CAEEL Poly(ADP-ribose) glycohydrolase pme-3 OS=Caenorhabditis elegans
GN=pme-3 PE=2 SV=1
Length = 781
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/40 (57%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 8 IATGNWGCGAFGGDPELKAIIQWLAASQASRPFVLYYTFG 47
I TG WGCGAF GD LK IIQ +AA A RP + + +FG
Sbjct: 674 IVTGWWGCGAFNGDKPLKFIIQVIAAGVADRP-LHFCSFG 712
>sp|Q9QYM2|PARG_RAT Poly(ADP-ribose) glycohydrolase OS=Rattus norvegicus GN=Parg PE=1
SV=1
Length = 972
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 35/82 (42%), Positives = 49/82 (59%), Gaps = 17/82 (20%)
Query: 3 KDLPGIATGNWGCGAFGGDPELKAIIQWLAASQASRPFVLYYTFGIDALQNLDQITQWIL 62
++L +ATGNWGCGAFGGD LKA+IQ LAA+ A R V+Y+TFG L
Sbjct: 856 ENLSAVATGNWGCGAFGGDARLKALIQLLAAAAAERD-VVYFTFGDSEL----------- 903
Query: 63 SHEWTVRDLWNMMVEYSSQRLN 84
+RD+++M + ++LN
Sbjct: 904 -----MRDIYSMHTFLTERKLN 920
>sp|Q2M3C7|SPKAP_HUMAN A-kinase anchor protein SPHKAP OS=Homo sapiens GN=SPHKAP PE=1 SV=1
Length = 1700
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 21 DPELKAIIQWLAASQASRPFVLYYTFGIDALQNLDQITQWILSHEWTVRDLWNMMVEY-- 78
D EL+A +QW+AAS+ P + + + ++ + Q + W V D+++ +V+Y
Sbjct: 1621 DAELRATLQWIAASELGIPTIYFKKSQENRIEKFLDVVQLVHRKSWKVGDIFHAVVQYCK 1680
Query: 79 -SSQRLNGRTNLGFFAWLL 96
++ +GR L F WLL
Sbjct: 1681 MHEEQKDGR--LSLFDWLL 1697
>sp|P0C6C0|SPKAP_RAT A-kinase anchor protein SPHKAP OS=Rattus norvegicus GN=Sphkap PE=1
SV=1
Length = 1683
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 21 DPELKAIIQWLAASQASRPFVLYYTFGIDALQNLDQITQWILSHEWTVRDLWNMMVEYSS 80
D EL+A +QW+AAS+ P + + ++ + + + W V D+++ +V+Y
Sbjct: 1604 DAELRATLQWIAASELGIPTIYFKKSQESRIEKFLDVVKLVHQKSWKVGDIFHAVVQYCK 1663
Query: 81 QRLNGRTNL-GFFAWLL 96
+ F WLL
Sbjct: 1664 MHAEQKEGTPSLFDWLL 1680
>sp|Q6NSW3|SPKAP_MOUSE A-kinase anchor protein SPHKAP OS=Mus musculus GN=Sphkap PE=2 SV=2
Length = 1687
Score = 39.3 bits (90), Expect = 0.007, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 21 DPELKAIIQWLAASQASRPFVLYYTFGIDALQNLDQITQWILSHEWTVRDLWNMMVEYSS 80
D EL+A +QW+AAS+ P + + ++ + + + W V D+++ +V+Y
Sbjct: 1608 DAELRATLQWIAASELGIPTIYFKKSQESRIEKFLDVVKLVQQKSWKVGDIFHAVVQYCK 1667
Query: 81 QRLNGRTNL-GFFAWLL 96
+ F WLL
Sbjct: 1668 LHAEQKERTPSLFDWLL 1684
>sp|Q9N5L4|PME4_CAEEL Poly(ADP-ribose) glycohydrolase pme-4 OS=Caenorhabditis elegans
GN=pme-4 PE=2 SV=2
Length = 485
Score = 39.3 bits (90), Expect = 0.008, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 8 IATGNWGCGAFGGDPELKAIIQWLAASQASRPFVLYYTFG 47
+ +G WGCGAF G+ LK +IQ +A + RP + + TFG
Sbjct: 391 VVSGWWGCGAFRGNKPLKFLIQVIACGISDRP-LQFCTFG 429
>sp|Q1LV19|SPKAP_DANRE A-kinase anchor protein SPHKAP OS=Danio rerio GN=sphkap PE=3 SV=1
Length = 1596
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 21 DPELKAIIQWLAASQASRPFVLYYTFGIDALQNLDQITQWILSHEWTVRDLWNMMVEY-- 78
D EL+A +QW++AS+ P + + L L ++ Q W V DL++ + ++
Sbjct: 1513 DGELRAALQWISASELGVPALYFRKTHQHNLTKLHRVLQLAGQKAWRVGDLFSAVAQFCQ 1572
Query: 79 --SSQRLNGRTNLGFFAWLLPS 98
L GR F W+L +
Sbjct: 1573 LHQDLELKGRPLPSLFDWILKT 1594
>sp|O88987|AKAP3_MOUSE A-kinase anchor protein 3 OS=Mus musculus GN=Akap3 PE=2 SV=2
Length = 864
Score = 35.4 bits (80), Expect = 0.10, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 51/104 (49%), Gaps = 7/104 (6%)
Query: 2 GKDLPGIATGNWGCGAFGGDPELKAIIQWLAASQASRPFVLYYTFGIDALQ-NLDQITQW 60
G ++P + N + +L+A++QW+AAS+ + P +LY+ + +Q L Q++
Sbjct: 762 GCEIPKVIVSNHNLADTVQNKQLQAVLQWVAASELNVP-ILYFAGDDEGIQEKLLQLSAT 820
Query: 61 ILSHEWTVRDLWNMMVEYSSQR-----LNGRTNLGFFAWLLPSL 99
+ +V ++ ++ Y +R + T L WL+ +L
Sbjct: 821 AVEKGRSVGEVLQSVLRYEKERQLDEAVGNVTRLQLLDWLMANL 864
>sp|Q60662|AKAP4_MOUSE A-kinase anchor protein 4 OS=Mus musculus GN=Akap4 PE=1 SV=1
Length = 849
Score = 35.0 bits (79), Expect = 0.14, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 12 NWGCGAFGGDPELKAIIQWLAASQASRPFVLYYTFGIDALQNLDQITQWILSHEWTVRDL 71
N C +L+A++QW+AASQ + P + + L+ L +++ ++V DL
Sbjct: 757 NNQCSTTNLQKQLQAVLQWIAASQFNVPMLYFMGDDDGQLEKLPEVSAKAAEKGYSVGDL 816
Query: 72 WNMMVEYSSQR-----LNGRTNLGFFAWLLPSL 99
+++++ +R + WLL +L
Sbjct: 817 LQEVMKFAKERQLDEAVGNMARKQLLDWLLANL 849
>sp|O35774|AKAP4_RAT A-kinase anchor protein 4 OS=Rattus norvegicus GN=Akap4 PE=1 SV=1
Length = 847
Score = 34.7 bits (78), Expect = 0.15, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 12 NWGCGAFGGDPELKAIIQWLAASQASRPFVLYYTFGIDALQNLDQITQWILSHEWTVRDL 71
N C +L+A++QW+AASQ + P + + L+ L +++ ++V DL
Sbjct: 755 NNQCSTSNLQKQLQAVLQWIAASQFNVPMLYFMGDDDGQLEKLPEVSAKAAEKGYSVGDL 814
Query: 72 WNMMVEYSSQR-----LNGRTNLGFFAWLLPSL 99
+++++ +R + WLL +L
Sbjct: 815 LQEVMKFAKERQLDEAVGNMARKQLLDWLLANL 847
>sp|Q6YR01|KAD_ONYPE Adenylate kinase OS=Onion yellows phytoplasma (strain OY-M) GN=adk
PE=3 SV=1
Length = 217
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Query: 6 PGIATGNWGCGAFGGDPELKAIIQWLAA-SQASRPFVLYYT-----FGIDALQNLDQITQ 59
PGI + D + + ++ L +Q + P V YY F +D +QN+DQ+T+
Sbjct: 147 PGICDKDQKTLIQREDDKPETFLKRLKVFNQETLPLVQYYREQNQLFEVDGMQNIDQVTK 206
Query: 60 WILSHEWTVR 69
IL T R
Sbjct: 207 MILEVLETDR 216
>sp|Q5JQC9|AKAP4_HUMAN A-kinase anchor protein 4 OS=Homo sapiens GN=AKAP4 PE=2 SV=1
Length = 854
Score = 33.1 bits (74), Expect = 0.50, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 12 NWGCGAFGGDPELKAIIQWLAASQASRPFVLYYTFGIDA-LQNLDQITQWILSHEWTVRD 70
N C +L+A++QW+AASQ + P +LY+ D L+ L Q++ ++V
Sbjct: 762 NNQCSTNSLQKQLQAVLQWIAASQFNVP-MLYFMGDKDGQLEKLPQVSAKAAEKGYSVGG 820
Query: 71 LWNMMVEYSSQR 82
L +++++ +R
Sbjct: 821 LLQEVMKFAKER 832
>sp|O77797|AKAP3_BOVIN A-kinase anchor protein 3 OS=Bos taurus GN=AKAP3 PE=2 SV=2
Length = 858
Score = 32.7 bits (73), Expect = 0.75, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 45/85 (52%), Gaps = 7/85 (8%)
Query: 21 DPELKAIIQWLAASQASRPFVLYYTFGIDALQ-NLDQITQWILSHEWTVRDLWNMMVEYS 79
+ +L+A++QW+AAS+ + P +LY+ + +Q L Q++ + +V ++ ++ Y
Sbjct: 775 NKQLQAVLQWVAASELNVP-ILYFAGDDEGIQEKLLQLSAAAVEKGRSVGEVLQSVLRYE 833
Query: 80 SQR-----LNGRTNLGFFAWLLPSL 99
+R + T L WL+ +L
Sbjct: 834 KERQLDEAVGNVTRLQLLDWLMVNL 858
>sp|Q9UKA4|AKA11_HUMAN A-kinase anchor protein 11 OS=Homo sapiens GN=AKAP11 PE=1 SV=1
Length = 1901
Score = 32.3 bits (72), Expect = 0.81, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 16/84 (19%)
Query: 21 DPELKAIIQWLAASQASRPFVLYYTFGIDALQNLDQITQWILSHEWTVRDLWNMMVEY-- 78
DP+L+ I+QWL AS+A V F A + +++ + W V DL +++Y
Sbjct: 1823 DPQLRIILQWLIASEAE---VAELYFHDSANKEFMLLSKQLQEKGWKVGDLLQAVLQYYE 1879
Query: 79 ------SSQRLNGRTNLGFFAWLL 96
S +R F WLL
Sbjct: 1880 VMEKASSEERCK-----SLFDWLL 1898
>sp|O75969|AKAP3_HUMAN A-kinase anchor protein 3 OS=Homo sapiens GN=AKAP3 PE=1 SV=2
Length = 853
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 45/85 (52%), Gaps = 7/85 (8%)
Query: 21 DPELKAIIQWLAASQASRPFVLYYTFGIDALQ-NLDQITQWILSHEWTVRDLWNMMVEYS 79
+ +L+A++QW+AAS+ + P +LY+ + +Q L Q++ + +V ++ ++ Y
Sbjct: 770 NKQLQAVLQWVAASELNVP-ILYFAGDDEGIQEKLLQLSAAAVDKGCSVGEVLQSVLRYE 828
Query: 80 SQR-----LNGRTNLGFFAWLLPSL 99
+R + T L WL+ +L
Sbjct: 829 KERQLNEAVGNVTPLQLLDWLMVNL 853
>sp|A7FLT3|KATG_YERP3 Catalase-peroxidase OS=Yersinia pseudotuberculosis serotype O:1b
(strain IP 31758) GN=katG PE=3 SV=1
Length = 737
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 18 FGGDPELKAIIQWLAASQASRPFVLYYTFGIDALQNLDQ 56
FG +PEL+A+ + A+ A FV +T + + NLD+
Sbjct: 693 FGSNPELRAVAEVYASDDAKEKFVHDFTKVWEKVMNLDR 731
>sp|B1JJB5|KATG_YERPY Catalase-peroxidase OS=Yersinia pseudotuberculosis serotype O:3
(strain YPIII) GN=katG PE=3 SV=1
Length = 737
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 18 FGGDPELKAIIQWLAASQASRPFVLYYTFGIDALQNLDQ 56
FG +PEL+A+ + A+ A FV +T + + NLD+
Sbjct: 693 FGSNPELRAVAEVYASDDAKEKFVHDFTKVWEKVMNLDR 731
>sp|Q66E82|KATG_YERPS Catalase-peroxidase OS=Yersinia pseudotuberculosis serotype I
(strain IP32953) GN=katG PE=3 SV=1
Length = 737
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 18 FGGDPELKAIIQWLAASQASRPFVLYYTFGIDALQNLDQ 56
FG +PEL+A+ + A+ A FV +T + + NLD+
Sbjct: 693 FGSNPELRAVAEVYASDDAKEKFVHDFTKVWEKVMNLDR 731
>sp|A4TQ37|KATG_YERPP Catalase-peroxidase OS=Yersinia pestis (strain Pestoides F) GN=katG
PE=3 SV=1
Length = 737
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 18 FGGDPELKAIIQWLAASQASRPFVLYYTFGIDALQNLDQ 56
FG +PEL+A+ + A+ A FV +T + + NLD+
Sbjct: 693 FGSNPELRAVAEVYASDDAKEKFVHDFTKVWEKVMNLDR 731
>sp|Q1CLM4|KATG_YERPN Catalase-peroxidase OS=Yersinia pestis bv. Antiqua (strain
Nepal516) GN=katG PE=3 SV=1
Length = 737
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 18 FGGDPELKAIIQWLAASQASRPFVLYYTFGIDALQNLDQ 56
FG +PEL+A+ + A+ A FV +T + + NLD+
Sbjct: 693 FGSNPELRAVAEVYASDDAKEKFVHDFTKVWEKVMNLDR 731
>sp|A9R0X4|KATG_YERPG Catalase-peroxidase OS=Yersinia pestis bv. Antiqua (strain Angola)
GN=katG PE=3 SV=1
Length = 737
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 18 FGGDPELKAIIQWLAASQASRPFVLYYTFGIDALQNLDQ 56
FG +PEL+A+ + A+ A FV +T + + NLD+
Sbjct: 693 FGSNPELRAVAEVYASDDAKEKFVHDFTKVWEKVMNLDR 731
>sp|Q9X6B0|KATG_YERPE Catalase-peroxidase OS=Yersinia pestis GN=katG PE=1 SV=1
Length = 737
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 18 FGGDPELKAIIQWLAASQASRPFVLYYTFGIDALQNLDQ 56
FG +PEL+A+ + A+ A FV +T + + NLD+
Sbjct: 693 FGSNPELRAVAEVYASDDAKEKFVHDFTKVWEKVMNLDR 731
>sp|B2K5B9|KATG_YERPB Catalase-peroxidase OS=Yersinia pseudotuberculosis serotype IB
(strain PB1/+) GN=katG PE=3 SV=1
Length = 737
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 18 FGGDPELKAIIQWLAASQASRPFVLYYTFGIDALQNLDQ 56
FG +PEL+A+ + A+ A FV +T + + NLD+
Sbjct: 693 FGSNPELRAVAEVYASDDAKEKFVHDFTKVWEKVMNLDR 731
>sp|Q1C435|KATG_YERPA Catalase-peroxidase OS=Yersinia pestis bv. Antiqua (strain Antiqua)
GN=katG PE=3 SV=1
Length = 737
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 18 FGGDPELKAIIQWLAASQASRPFVLYYTFGIDALQNLDQ 56
FG +PEL+A+ + A+ A FV +T + + NLD+
Sbjct: 693 FGSNPELRAVAEVYASDDAKEKFVHDFTKVWEKVMNLDR 731
>sp|Q30Y50|LPXK_DESDG Tetraacyldisaccharide 4'-kinase OS=Desulfovibrio desulfuricans
(strain G20) GN=lpxK PE=3 SV=1
Length = 356
Score = 29.6 bits (65), Expect = 5.6, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 2 GKDLPGIATGNWGCGAFGGDPELKAIIQWLA 32
G D+P ++ GN G G G P ++ ++QW A
Sbjct: 39 GTDVPCVSVGNIGWGGSGKTPVVQWLLQWAA 69
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.137 0.458
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,612,548
Number of Sequences: 539616
Number of extensions: 1676060
Number of successful extensions: 3247
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 3220
Number of HSP's gapped (non-prelim): 31
length of query: 116
length of database: 191,569,459
effective HSP length: 84
effective length of query: 32
effective length of database: 146,241,715
effective search space: 4679734880
effective search space used: 4679734880
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)