BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039298
(197 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P42036|RS143_ARATH 40S ribosomal protein S14-3 OS=Arabidopsis thaliana GN=RPS14C PE=2
SV=2
Length = 150
Score = 256 bits (655), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 127/153 (83%), Positives = 134/153 (87%), Gaps = 14/153 (9%)
Query: 34 MSRRKNREPKEENVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMK 93
MS+RK +EPK ENVTLGPAVR+GE VFGV H+FASFNDTFIHVTDLSGRETLVRITGGMK
Sbjct: 1 MSKRKTKEPKVENVTLGPAVREGEQVFGVVHVFASFNDTFIHVTDLSGRETLVRITGGMK 60
Query: 94 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALAR 153
VKADRDESSPYAAMLAAQDV+ RCKELGITA+H+KLRATGGNKTKTPGPGAQSALRALAR
Sbjct: 61 VKADRDESSPYAAMLAAQDVAQRCKELGITAIHVKLRATGGNKTKTPGPGAQSALRALAR 120
Query: 154 SGMKIGRIDLEGLLILGLYYISEDVTPIPTDST 186
SGMKIGRI EDVTPIPTDST
Sbjct: 121 SGMKIGRI--------------EDVTPIPTDST 139
>sp|P19950|RS141_MAIZE 40S ribosomal protein S14 OS=Zea mays PE=3 SV=1
Length = 149
Score = 254 bits (650), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 131/153 (85%), Positives = 134/153 (87%), Gaps = 15/153 (9%)
Query: 34 MSRRKNREPKEENVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMK 93
MSRRK REPKEENV LGP VR+GE VFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMK
Sbjct: 1 MSRRKTREPKEENV-LGPTVREGEFVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMK 59
Query: 94 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALAR 153
VKADRDESSPYAAMLAAQDV+ RCKELGITALHIKLRATGGNKTKTPGPGAQSALRALAR
Sbjct: 60 VKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALAR 119
Query: 154 SGMKIGRIDLEGLLILGLYYISEDVTPIPTDST 186
SGMKIGRI EDVTP+PTDST
Sbjct: 120 SGMKIGRI--------------EDVTPVPTDST 138
>sp|P19951|RS142_MAIZE 40S ribosomal protein S14 OS=Zea mays PE=3 SV=1
Length = 150
Score = 254 bits (649), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 129/151 (85%), Positives = 134/151 (88%), Gaps = 15/151 (9%)
Query: 36 RRKNREPKEENVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVK 95
R+K REPKEENV LGPAVR+GEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVK
Sbjct: 4 RKKTREPKEENV-LGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVK 62
Query: 96 ADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSG 155
ADRDESSPYAAMLA+QDV+ RCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSG
Sbjct: 63 ADRDESSPYAAMLASQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSG 122
Query: 156 MKIGRIDLEGLLILGLYYISEDVTPIPTDST 186
MKIGRI EDVTP+PTDST
Sbjct: 123 MKIGRI--------------EDVTPVPTDST 139
>sp|Q9CAX6|RS142_ARATH 40S ribosomal protein S14-2 OS=Arabidopsis thaliana GN=RPS14B PE=1
SV=1
Length = 150
Score = 253 bits (647), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 126/153 (82%), Positives = 133/153 (86%), Gaps = 14/153 (9%)
Query: 34 MSRRKNREPKEENVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMK 93
MS+RK +EPK E VTLGP+VR+GE VFGV HIFASFNDTFIHVTDLSGRETLVRITGGMK
Sbjct: 1 MSKRKTKEPKVETVTLGPSVREGEQVFGVVHIFASFNDTFIHVTDLSGRETLVRITGGMK 60
Query: 94 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALAR 153
VKADRDESSPYAAMLAAQDV+ RCKELGITA+H+KLRATGGNKTKTPGPGAQSALRALAR
Sbjct: 61 VKADRDESSPYAAMLAAQDVAQRCKELGITAMHVKLRATGGNKTKTPGPGAQSALRALAR 120
Query: 154 SGMKIGRIDLEGLLILGLYYISEDVTPIPTDST 186
SGMKIGRI EDVTPIPTDST
Sbjct: 121 SGMKIGRI--------------EDVTPIPTDST 139
>sp|O22584|RS14_LUPLU 40S ribosomal protein S14 OS=Lupinus luteus GN=RPS14 PE=2 SV=1
Length = 150
Score = 253 bits (645), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 130/153 (84%), Positives = 133/153 (86%), Gaps = 14/153 (9%)
Query: 34 MSRRKNREPKEENVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMK 93
MSRRK R+ KEE VTLGPAV DGEHVFGVA IFASFNDTFIHVTDLSGRETLVRITGGMK
Sbjct: 1 MSRRKVRDTKEETVTLGPAVSDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMK 60
Query: 94 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALAR 153
VKADRDESSPYAAMLAAQDV+TRCKELGITALHIKLRATGGNKTKTPG GAQSALRALAR
Sbjct: 61 VKADRDESSPYAAMLAAQDVATRCKELGITALHIKLRATGGNKTKTPGRGAQSALRALAR 120
Query: 154 SGMKIGRIDLEGLLILGLYYISEDVTPIPTDST 186
SGMKIGRI EDVTPIP+DST
Sbjct: 121 SGMKIGRI--------------EDVTPIPSDST 139
>sp|Q9SIH0|RS141_ARATH 40S ribosomal protein S14-1 OS=Arabidopsis thaliana GN=RPS14A PE=1
SV=1
Length = 150
Score = 251 bits (641), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 125/153 (81%), Positives = 133/153 (86%), Gaps = 14/153 (9%)
Query: 34 MSRRKNREPKEENVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMK 93
MS+RK +EPK + VTLGP+VR+GE VFGV HIFASFNDTFIHVTDLSGRETLVRITGGMK
Sbjct: 1 MSKRKTKEPKVDVVTLGPSVREGEQVFGVVHIFASFNDTFIHVTDLSGRETLVRITGGMK 60
Query: 94 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALAR 153
VKADRDESSPYAAMLAAQDV+ RCKELGITA+H+KLRATGGNKTKTPGPGAQSALRALAR
Sbjct: 61 VKADRDESSPYAAMLAAQDVAQRCKELGITAMHVKLRATGGNKTKTPGPGAQSALRALAR 120
Query: 154 SGMKIGRIDLEGLLILGLYYISEDVTPIPTDST 186
SGMKIGRI EDVTPIPTDST
Sbjct: 121 SGMKIGRI--------------EDVTPIPTDST 139
>sp|Q08699|RS14_PODCA 40S ribosomal protein S14 OS=Podocoryne carnea GN=RPS14 PE=2 SV=1
Length = 151
Score = 236 bits (602), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 117/154 (75%), Positives = 130/154 (84%), Gaps = 15/154 (9%)
Query: 34 MSRRKNREPKEENV-TLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGM 92
M+ RK + PKEE V +LGP V DGE+VFGVAHIFASFNDTF+HVTDLSG+ET+ R+TGGM
Sbjct: 1 MAPRKGKAPKEEQVISLGPQVADGENVFGVAHIFASFNDTFVHVTDLSGKETIARVTGGM 60
Query: 93 KVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALA 152
KVKADRDESSPYAAMLAAQDV+ RCKE+GITALH+KLRATGGN+TKTPGPGAQSALRALA
Sbjct: 61 KVKADRDESSPYAAMLAAQDVAVRCKEIGITALHVKLRATGGNRTKTPGPGAQSALRALA 120
Query: 153 RSGMKIGRIDLEGLLILGLYYISEDVTPIPTDST 186
RSGMKIGRI EDVTPIP+D T
Sbjct: 121 RSGMKIGRI--------------EDVTPIPSDCT 140
>sp|P46295|RS14_CHLRE 40S ribosomal protein S14 OS=Chlamydomonas reinhardtii GN=RPS14
PE=3 SV=1
Length = 153
Score = 235 bits (600), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 117/149 (78%), Positives = 127/149 (85%), Gaps = 14/149 (9%)
Query: 38 KNREPKEENVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKAD 97
K E +E V+LGP VR+GEHVFGVAHIFASFNDTF+HVTDLSGRET+ R+TGGMKVKAD
Sbjct: 8 KGDEAPKEVVSLGPTVREGEHVFGVAHIFASFNDTFVHVTDLSGRETISRVTGGMKVKAD 67
Query: 98 RDESSPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMK 157
RDESSPYAAMLAAQDV+ +CKELGITALHIKLRATGGN+TKTPGPGAQSALRALAR+GMK
Sbjct: 68 RDESSPYAAMLAAQDVAQKCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARAGMK 127
Query: 158 IGRIDLEGLLILGLYYISEDVTPIPTDST 186
IGRI EDVTPIPTDST
Sbjct: 128 IGRI--------------EDVTPIPTDST 142
>sp|P62264|RS14_MOUSE 40S ribosomal protein S14 OS=Mus musculus GN=Rps14 PE=2 SV=3
Length = 151
Score = 235 bits (599), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 118/154 (76%), Positives = 130/154 (84%), Gaps = 15/154 (9%)
Query: 34 MSRRKNREPKEENV-TLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGM 92
M+ RK +E KEE V +LGP V +GE+VFGV HIFASFNDTF+HVTDLSG+ET+ R+TGGM
Sbjct: 1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60
Query: 93 KVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALA 152
KVKADRDESSPYAAMLAAQDV+ RCKELGITALHIKLRATGGN+TKTPGPGAQSALRALA
Sbjct: 61 KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALA 120
Query: 153 RSGMKIGRIDLEGLLILGLYYISEDVTPIPTDST 186
RSGMKIGRI EDVTPIP+DST
Sbjct: 121 RSGMKIGRI--------------EDVTPIPSDST 140
>sp|P62263|RS14_HUMAN 40S ribosomal protein S14 OS=Homo sapiens GN=RPS14 PE=1 SV=3
Length = 151
Score = 235 bits (599), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 118/154 (76%), Positives = 130/154 (84%), Gaps = 15/154 (9%)
Query: 34 MSRRKNREPKEENV-TLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGM 92
M+ RK +E KEE V +LGP V +GE+VFGV HIFASFNDTF+HVTDLSG+ET+ R+TGGM
Sbjct: 1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60
Query: 93 KVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALA 152
KVKADRDESSPYAAMLAAQDV+ RCKELGITALHIKLRATGGN+TKTPGPGAQSALRALA
Sbjct: 61 KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALA 120
Query: 153 RSGMKIGRIDLEGLLILGLYYISEDVTPIPTDST 186
RSGMKIGRI EDVTPIP+DST
Sbjct: 121 RSGMKIGRI--------------EDVTPIPSDST 140
>sp|P62265|RS14_CRIGR 40S ribosomal protein S14 OS=Cricetulus griseus GN=RPS14 PE=2 SV=3
Length = 151
Score = 235 bits (599), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 118/154 (76%), Positives = 130/154 (84%), Gaps = 15/154 (9%)
Query: 34 MSRRKNREPKEENV-TLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGM 92
M+ RK +E KEE V +LGP V +GE+VFGV HIFASFNDTF+HVTDLSG+ET+ R+TGGM
Sbjct: 1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60
Query: 93 KVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALA 152
KVKADRDESSPYAAMLAAQDV+ RCKELGITALHIKLRATGGN+TKTPGPGAQSALRALA
Sbjct: 61 KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALA 120
Query: 153 RSGMKIGRIDLEGLLILGLYYISEDVTPIPTDST 186
RSGMKIGRI EDVTPIP+DST
Sbjct: 121 RSGMKIGRI--------------EDVTPIPSDST 140
>sp|P13471|RS14_RAT 40S ribosomal protein S14 OS=Rattus norvegicus GN=Rps14 PE=2 SV=3
Length = 151
Score = 233 bits (594), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 117/154 (75%), Positives = 130/154 (84%), Gaps = 15/154 (9%)
Query: 34 MSRRKNREPKEENV-TLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGM 92
M+ RK ++ KEE V +LGP V +GE+VFGV HIFASFNDTF+HVTDLSG+ET+ R+TGGM
Sbjct: 1 MAPRKGKDKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60
Query: 93 KVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALA 152
KVKADRDESSPYAAMLAAQDV+ RCKELGITALHIKLRATGGN+TKTPGPGAQSALRALA
Sbjct: 61 KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALA 120
Query: 153 RSGMKIGRIDLEGLLILGLYYISEDVTPIPTDST 186
RSGMKIGRI EDVTPIP+DST
Sbjct: 121 RSGMKIGRI--------------EDVTPIPSDST 140
>sp|P14130|RS14_DROME 40S ribosomal protein S14 OS=Drosophila melanogaster GN=RpS14a PE=1
SV=1
Length = 151
Score = 230 bits (586), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 117/154 (75%), Positives = 127/154 (82%), Gaps = 15/154 (9%)
Query: 34 MSRRKNREPKEE-NVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGM 92
M+ RK + KEE V LGP VRDGE VFGVAHI+ASFNDTF+HVTDLSGRET+ R+TGGM
Sbjct: 1 MAPRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGM 60
Query: 93 KVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALA 152
KVKADRDE+SPYAAMLAAQDV+ +CK LGITALHIKLRATGGNKTKTPGPGAQSALRALA
Sbjct: 61 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSALRALA 120
Query: 153 RSGMKIGRIDLEGLLILGLYYISEDVTPIPTDST 186
RS MKIGRI EDVTPIP+DST
Sbjct: 121 RSSMKIGRI--------------EDVTPIPSDST 140
>sp|Q6XI08|RS14A_DROYA 40S ribosomal protein S14a OS=Drosophila yakuba GN=RpS14a PE=2 SV=1
Length = 151
Score = 230 bits (586), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 117/154 (75%), Positives = 127/154 (82%), Gaps = 15/154 (9%)
Query: 34 MSRRKNREPKEE-NVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGM 92
M+ RK + KEE V LGP VRDGE VFGVAHI+ASFNDTF+HVTDLSGRET+ R+TGGM
Sbjct: 1 MAPRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGM 60
Query: 93 KVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALA 152
KVKADRDE+SPYAAMLAAQDV+ +CK LGITALHIKLRATGGNKTKTPGPGAQSALRALA
Sbjct: 61 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSALRALA 120
Query: 153 RSGMKIGRIDLEGLLILGLYYISEDVTPIPTDST 186
RS MKIGRI EDVTPIP+DST
Sbjct: 121 RSSMKIGRI--------------EDVTPIPSDST 140
>sp|Q7QBX2|RS14B_ANOGA 40S ribosomal protein S14b OS=Anopheles gambiae GN=RpS14b PE=3 SV=2
Length = 152
Score = 230 bits (586), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 115/151 (76%), Positives = 127/151 (84%), Gaps = 15/151 (9%)
Query: 37 RKNREPKEE-NVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVK 95
RKN+ KEE V+LGP VRDGE VFGVAHI+ASFNDTF+HVTDLSG+ET+ R+TGGMKVK
Sbjct: 5 RKNKVAKEEVQVSLGPQVRDGEVVFGVAHIYASFNDTFVHVTDLSGKETISRVTGGMKVK 64
Query: 96 ADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSG 155
ADRDE+SPYAAMLAAQDV+ +CK LGITALHIKLRATGGN+TKTPGPGAQSALRALARS
Sbjct: 65 ADRDEASPYAAMLAAQDVAEKCKSLGITALHIKLRATGGNRTKTPGPGAQSALRALARSS 124
Query: 156 MKIGRIDLEGLLILGLYYISEDVTPIPTDST 186
MKIGRI EDVTPIP+DST
Sbjct: 125 MKIGRI--------------EDVTPIPSDST 141
>sp|Q1HR24|RS14_AEDAE 40S ribosomal protein S14 OS=Aedes aegypti GN=RpS14 PE=2 SV=1
Length = 151
Score = 229 bits (585), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 115/154 (74%), Positives = 129/154 (83%), Gaps = 15/154 (9%)
Query: 34 MSRRKNREPKEE-NVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGM 92
M+ RKN+ KEE V+LGP VR+GE VFGVAHI+ASFNDTF+HVTDLSG+ET+ R+TGGM
Sbjct: 1 MAPRKNKTVKEEVQVSLGPQVREGEIVFGVAHIYASFNDTFVHVTDLSGKETISRVTGGM 60
Query: 93 KVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALA 152
KVKADRDE+SPYAAMLAAQDV+ +CK LGITALHIKLRATGGN+TKTPGPGAQSALRALA
Sbjct: 61 KVKADRDEASPYAAMLAAQDVAEKCKSLGITALHIKLRATGGNRTKTPGPGAQSALRALA 120
Query: 153 RSGMKIGRIDLEGLLILGLYYISEDVTPIPTDST 186
RS MKIGRI EDVTPIP+DST
Sbjct: 121 RSSMKIGRI--------------EDVTPIPSDST 140
>sp|Q7QEH1|RS14A_ANOGA 40S ribosomal protein S14a OS=Anopheles gambiae GN=RpS14a PE=3 SV=2
Length = 152
Score = 229 bits (584), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 115/151 (76%), Positives = 127/151 (84%), Gaps = 15/151 (9%)
Query: 37 RKNREPKEE-NVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVK 95
RKN+ KEE V+LGP VRDGE VFGVAHI+ASFNDTF+HVTDLSG+ET+ R+TGGMKVK
Sbjct: 5 RKNKVVKEEVQVSLGPQVRDGEVVFGVAHIYASFNDTFVHVTDLSGKETISRVTGGMKVK 64
Query: 96 ADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSG 155
ADRDE+SPYAAMLAAQDV+ +CK LGITALHIKLRATGGN+TKTPGPGAQSALRALARS
Sbjct: 65 ADRDEASPYAAMLAAQDVAEKCKSLGITALHIKLRATGGNRTKTPGPGAQSALRALARSS 124
Query: 156 MKIGRIDLEGLLILGLYYISEDVTPIPTDST 186
MKIGRI EDVTPIP+DST
Sbjct: 125 MKIGRI--------------EDVTPIPSDST 141
>sp|Q5UAM9|RS14_BOMMO 40S ribosomal protein S14 OS=Bombyx mori GN=RpS14 PE=2 SV=1
Length = 151
Score = 226 bits (577), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 116/154 (75%), Positives = 126/154 (81%), Gaps = 15/154 (9%)
Query: 34 MSRRKNREPKEE-NVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGM 92
M+ RKN+ KEE VTLGP GE VFGVAHIFASFNDTF+HVTDLSGRET+ R+TGGM
Sbjct: 1 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 60
Query: 93 KVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALA 152
KVKADRDE+SPYAAMLAAQDV+ +CK LGITALHIKLRATGGNKTKTPGPGAQSALRALA
Sbjct: 61 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSALRALA 120
Query: 153 RSGMKIGRIDLEGLLILGLYYISEDVTPIPTDST 186
RS MKIGRI EDVTP+P+DST
Sbjct: 121 RSSMKIGRI--------------EDVTPVPSDST 140
>sp|P19115|RS14_NEUCR 40S ribosomal protein S14 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=rps-14
PE=3 SV=2
Length = 150
Score = 223 bits (567), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 111/153 (72%), Positives = 124/153 (81%), Gaps = 14/153 (9%)
Query: 34 MSRRKNREPKEENVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMK 93
M +K P +EN++LGP +R+GE VFGVA IFASFNDTF+HVTDLSGRET R+ GG+K
Sbjct: 1 MPPKKAARPAQENISLGPQIREGELVFGVARIFASFNDTFVHVTDLSGRETTDRVIGGIK 60
Query: 94 VKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALAR 153
VKADRDESSPYAAMLAAQDV+ RCKELGITALHIK+RATGGN T+TPGPGAQSALRALAR
Sbjct: 61 VKADRDESSPYAAMLAAQDVAARCKELGITALHIKIRATGGNGTRTPGPGAQSALRALAR 120
Query: 154 SGMKIGRIDLEGLLILGLYYISEDVTPIPTDST 186
SGMKIGRI EDVTP P+DST
Sbjct: 121 SGMKIGRI--------------EDVTPTPSDST 139
>sp|Q54EG3|RS14_DICDI 40S ribosomal protein S14 OS=Dictyostelium discoideum GN=rps14 PE=3
SV=1
Length = 152
Score = 221 bits (562), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 113/157 (71%), Positives = 124/157 (78%), Gaps = 18/157 (11%)
Query: 41 EPKEENVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDE 100
E + GP+ E VFGVAHIFASFNDTF+HVTDLS +ET+VR+TGGMKVK DRDE
Sbjct: 14 EALSAKIPCGPS----ELVFGVAHIFASFNDTFVHVTDLSSKETIVRVTGGMKVKTDRDE 69
Query: 101 SSPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGR 160
SSPYAA +AAQDV+ RCKELG+TALHIKLRATGGN +KTPGPGAQSALRALARSGM+IGR
Sbjct: 70 SSPYAATMAAQDVALRCKELGVTALHIKLRATGGNGSKTPGPGAQSALRALARSGMRIGR 129
Query: 161 IDLEGLLILGLYYISEDVTPIPTDSTRRKGGRRGRRL 197
I EDVTPIPTDSTRRK G RGRRL
Sbjct: 130 I--------------EDVTPIPTDSTRRKSGHRGRRL 152
>sp|P48855|RS14_PROCL 40S ribosomal protein S14 OS=Procambarus clarkii GN=RPS14 PE=2 SV=1
Length = 151
Score = 220 bits (560), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 110/154 (71%), Positives = 122/154 (79%), Gaps = 15/154 (9%)
Query: 34 MSRRKNREPKEE-NVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGM 92
M+ RK + KEE V LGP V DGE VF V HI+AS+NDTF+HVTDLSGRET+VRITGG
Sbjct: 1 MAPRKGKVQKEEVQVQLGPQVLDGEKVFAVCHIYASYNDTFVHVTDLSGRETIVRITGGQ 60
Query: 93 KVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALA 152
KVKADRDESSPYAAMLAAQDV+ +CK LGI LHIK+RATGGNKTKTPGPG QSALRALA
Sbjct: 61 KVKADRDESSPYAAMLAAQDVAEKCKSLGINCLHIKIRATGGNKTKTPGPGGQSALRALA 120
Query: 153 RSGMKIGRIDLEGLLILGLYYISEDVTPIPTDST 186
R+GMKIGRI EDVTP+P+DST
Sbjct: 121 RAGMKIGRI--------------EDVTPVPSDST 140
>sp|P48150|RS14_CAEEL 40S ribosomal protein S14 OS=Caenorhabditis elegans GN=rps-14 PE=3
SV=1
Length = 152
Score = 219 bits (559), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 109/155 (70%), Positives = 126/155 (81%), Gaps = 16/155 (10%)
Query: 34 MSRRKNREPKEEN--VTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGG 91
M+ + + KEE V+LGP ++GE +FGVAHIFASFNDTF+H+TD+SGRET+VR+TGG
Sbjct: 1 MAPARKGKAKEEQAVVSLGPQAKEGELIFGVAHIFASFNDTFVHITDISGRETIVRVTGG 60
Query: 92 MKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL 151
MKVKADRDESSPYAAMLAAQDV+ RCK+LGI ALHIKLRATGG +TKTPGPGAQSALRAL
Sbjct: 61 MKVKADRDESSPYAAMLAAQDVADRCKQLGINALHIKLRATGGTRTKTPGPGAQSALRAL 120
Query: 152 ARSGMKIGRIDLEGLLILGLYYISEDVTPIPTDST 186
AR+GMKIGRI EDVTPIP+D T
Sbjct: 121 ARAGMKIGRI--------------EDVTPIPSDCT 141
>sp|Q96W53|RS14_CANAX 40S ribosomal protein S14 OS=Candida albicans GN=RPS14 PE=3 SV=1
Length = 134
Score = 200 bits (509), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 97/130 (74%), Positives = 109/130 (83%), Gaps = 14/130 (10%)
Query: 57 EHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTR 116
VFGVA IFASFNDTF+HVTDLSG+ET+ R+TGGMKVKADRDESSPYAAMLAAQDV+ +
Sbjct: 8 SQVFGVARIFASFNDTFVHVTDLSGKETIARVTGGMKVKADRDESSPYAAMLAAQDVAAK 67
Query: 117 CKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIDLEGLLILGLYYISE 176
CKE+GITA+HIKLRATGG KTKTPGPG QSALRALARSG++IGRI E
Sbjct: 68 CKEVGITAVHIKLRATGGTKTKTPGPGGQSALRALARSGLRIGRI--------------E 113
Query: 177 DVTPIPTDST 186
DVTP+P+DST
Sbjct: 114 DVTPVPSDST 123
>sp|P27069|RS14_KLULA 40S ribosomal protein S14 OS=Kluyveromyces lactis (strain ATCC 8585
/ CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
GN=RPS14 PE=3 SV=1
Length = 137
Score = 200 bits (508), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 95/133 (71%), Positives = 111/133 (83%), Gaps = 14/133 (10%)
Query: 54 RDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDV 113
+D VFGVA IFASFNDTF+HVTDLSGRET+ R+TGGMKVKADRDESSPYAAMLAAQDV
Sbjct: 8 KDNSQVFGVARIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDESSPYAAMLAAQDV 67
Query: 114 STRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIDLEGLLILGLYY 173
+ +CKE+GITA+HIK+RATGG ++KTPGPG Q+ALRALARSG++IGRI
Sbjct: 68 AAKCKEVGITAVHIKIRATGGTRSKTPGPGGQAALRALARSGLRIGRI------------ 115
Query: 174 ISEDVTPIPTDST 186
EDVTP+P+DST
Sbjct: 116 --EDVTPVPSDST 126
>sp|P06367|RS14A_YEAST 40S ribosomal protein S14-A OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPS14A PE=1 SV=5
Length = 137
Score = 200 bits (508), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 94/133 (70%), Positives = 111/133 (83%), Gaps = 14/133 (10%)
Query: 54 RDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDV 113
RD VFGVA I+ASFNDTF+HVTDLSG+ET+ R+TGGMKVKADRDESSPYAAMLAAQDV
Sbjct: 8 RDNSQVFGVARIYASFNDTFVHVTDLSGKETIARVTGGMKVKADRDESSPYAAMLAAQDV 67
Query: 114 STRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIDLEGLLILGLYY 173
+ +CKE+GITA+H+K+RATGG +TKTPGPG Q+ALRALARSG++IGRI
Sbjct: 68 AAKCKEVGITAVHVKIRATGGTRTKTPGPGGQAALRALARSGLRIGRI------------ 115
Query: 174 ISEDVTPIPTDST 186
EDVTP+P+DST
Sbjct: 116 --EDVTPVPSDST 126
>sp|P39516|RS14B_YEAST 40S ribosomal protein S14-B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPS14B PE=1 SV=2
Length = 138
Score = 199 bits (507), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 94/133 (70%), Positives = 111/133 (83%), Gaps = 14/133 (10%)
Query: 54 RDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDV 113
RD VFGVA I+ASFNDTF+HVTDLSG+ET+ R+TGGMKVKADRDESSPYAAMLAAQDV
Sbjct: 9 RDNSQVFGVARIYASFNDTFVHVTDLSGKETIARVTGGMKVKADRDESSPYAAMLAAQDV 68
Query: 114 STRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIDLEGLLILGLYY 173
+ +CKE+GITA+H+K+RATGG +TKTPGPG Q+ALRALARSG++IGRI
Sbjct: 69 AAKCKEVGITAVHVKIRATGGTRTKTPGPGGQAALRALARSGLRIGRI------------ 116
Query: 174 ISEDVTPIPTDST 186
EDVTP+P+DST
Sbjct: 117 --EDVTPVPSDST 127
>sp|Q9XEK6|RS14_TORRU 40S ribosomal protein S14 OS=Tortula ruralis GN=RPS14 PE=2 SV=1
Length = 134
Score = 198 bits (504), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 101/128 (78%), Positives = 109/128 (85%), Gaps = 15/128 (11%)
Query: 59 VFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCK 118
VFGVAHIFASFNDTF+HVTDLSG+ET + +TGGMKVKADRDE+SPYAAMLAAQDV+ RCK
Sbjct: 11 VFGVAHIFASFNDTFVHVTDLSGKETSLVLTGGMKVKADRDEASPYAAMLAAQDVAQRCK 70
Query: 119 ELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIDLEGLLILGLYYISEDV 178
ELGITALHI +RATGGNKTKTPGPGAQS LRALARSGM+IGRI EDV
Sbjct: 71 ELGITALHINVRATGGNKTKTPGPGAQS-LRALARSGMRIGRI--------------EDV 115
Query: 179 TPIPTDST 186
TPIPTDST
Sbjct: 116 TPIPTDST 123
>sp|P19800|RS14_TRYBB 40S ribosomal protein S14 OS=Trypanosoma brucei brucei GN=RPS14
PE=3 SV=1
Length = 144
Score = 176 bits (445), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/144 (65%), Positives = 111/144 (77%), Gaps = 14/144 (9%)
Query: 43 KEENVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESS 102
K+E G + + V+GV HI+ASFNDTF+HVTD+SGRET ++TGGMKVKADRDESS
Sbjct: 4 KQEVKYYGSSAGKDQLVYGVVHIYASFNDTFVHVTDMSGRETFCKVTGGMKVKADRDESS 63
Query: 103 PYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRID 162
PYAAM+AAQDV RCKE GI ALH+K+RATGG TK+PGPGAQ+ALRALAR+GMKIGRI
Sbjct: 64 PYAAMMAAQDVVARCKECGINALHVKMRATGGVGTKSPGPGAQAALRALARAGMKIGRI- 122
Query: 163 LEGLLILGLYYISEDVTPIPTDST 186
EDVTP+PTDST
Sbjct: 123 -------------EDVTPVPTDST 133
>sp|O14150|RS14_SCHPO 40S ribosomal protein S14 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rps14a PE=1 SV=1
Length = 139
Score = 171 bits (433), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 101/138 (73%), Positives = 116/138 (84%), Gaps = 14/138 (10%)
Query: 49 LGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAML 108
+GP +R GE VFGVAHIFASFNDTF+H+TDL+G+ET+VR+TGGMKVK DRDESSPYAAML
Sbjct: 5 VGPQIRSGELVFGVAHIFASFNDTFVHITDLTGKETIVRVTGGMKVKTDRDESSPYAAML 64
Query: 109 AAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIDLEGLLI 168
AAQD + +CKE+GITALHIK+RATGG TKTPGPGAQ+ALRALAR+GM+IGRI
Sbjct: 65 AAQDAAAKCKEVGITALHIKIRATGGTATKTPGPGAQAALRALARAGMRIGRI------- 117
Query: 169 LGLYYISEDVTPIPTDST 186
EDVTPIPTDST
Sbjct: 118 -------EDVTPIPTDST 128
>sp|A0B9L3|RS11_METTP 30S ribosomal protein S11 OS=Methanosaeta thermophila (strain DSM
6194 / PT) GN=rps11 PE=3 SV=1
Length = 129
Score = 160 bits (405), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 77/141 (54%), Positives = 102/141 (72%), Gaps = 14/141 (9%)
Query: 57 EHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTR 116
E + +AHI++SFN+T I +TDL+G ET+ +I+GGM VKA RDESSPY AM A V+ +
Sbjct: 3 EGKWAIAHIYSSFNNTLITITDLTGAETIAKISGGMVVKAARDESSPYTAMQMAMQVAEQ 62
Query: 117 CKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIDLEGLLILGLYYISE 176
K GI +H+K+RA GGNK ++PGPGAQ+A+RALAR+G++IGRI E
Sbjct: 63 AKAKGIVGVHVKVRAPGGNKQRSPGPGAQAAIRALARAGLRIGRI--------------E 108
Query: 177 DVTPIPTDSTRRKGGRRGRRL 197
DVTPIP D T+ KGG+RGRR+
Sbjct: 109 DVTPIPHDGTKPKGGKRGRRV 129
>sp|Q0W1V4|RS11_UNCMA 30S ribosomal protein S11 OS=Uncultured methanogenic archaeon RC-I
GN=rps11 PE=3 SV=1
Length = 132
Score = 156 bits (394), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/138 (55%), Positives = 100/138 (72%), Gaps = 14/138 (10%)
Query: 60 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKE 119
+ +AHIF+SFN+T I VTDL+G ETL + +GGM VK DR+ESSPYAAM A +V+ + K
Sbjct: 9 WAIAHIFSSFNNTIITVTDLTGAETLAKTSGGMVVKQDRNESSPYAAMQMAMNVAEQIKA 68
Query: 120 LGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIDLEGLLILGLYYISEDVT 179
GI +HI++RA GGN ++PGPGAQ+A+R+LAR+G++IGRI EDVT
Sbjct: 69 KGIQGVHIRVRAPGGNHQRSPGPGAQAAIRSLARAGLRIGRI--------------EDVT 114
Query: 180 PIPTDSTRRKGGRRGRRL 197
PIP D TR GG+RGRR+
Sbjct: 115 PIPHDGTRAPGGKRGRRV 132
>sp|A6UW04|RS11_META3 30S ribosomal protein S11 OS=Methanococcus aeolicus (strain
Nankai-3 / ATCC BAA-1280) GN=rps11 PE=3 SV=1
Length = 124
Score = 150 bits (378), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 74/134 (55%), Positives = 95/134 (70%), Gaps = 14/134 (10%)
Query: 60 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKE 119
+GV HI+AS+N+T IHVTD++G ET+ +I+GGM VK +DESSPYAAM A ++ +E
Sbjct: 5 WGVIHIYASYNNTIIHVTDITGAETIAKISGGMIVKNQKDESSPYAAMQGAFKIADMIRE 64
Query: 120 LGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIDLEGLLILGLYYISEDVT 179
GI +HIK+RATGG+K+K PGPGAQ+A+RALAR+G+KIGRI ED T
Sbjct: 65 KGIDKVHIKVRATGGSKSKNPGPGAQAAIRALARAGIKIGRI--------------EDAT 110
Query: 180 PIPTDSTRRKGGRR 193
PIP D T K G R
Sbjct: 111 PIPHDGTTPKKGNR 124
>sp|A7IAH6|RS11_METB6 30S ribosomal protein S11 OS=Methanoregula boonei (strain 6A8)
GN=rps11 PE=3 SV=1
Length = 132
Score = 147 bits (371), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 76/138 (55%), Positives = 96/138 (69%), Gaps = 15/138 (10%)
Query: 52 AVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQ 111
A D E +G+AHIFASFN+T I VTDLSG ET+ + +GGM VK DR+ESSPYAAM A
Sbjct: 2 AANDKEK-WGIAHIFASFNNTIITVTDLSGAETVTKSSGGMVVKQDRNESSPYAAMQMAA 60
Query: 112 DVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIDLEGLLILGL 171
+V+ +E GI +H+K+RA G K ++PGPGAQ+A+RALAR+GM+IGRI
Sbjct: 61 NVAAIAREKGIVGVHVKVRAPGQGKQRSPGPGAQAAIRALARAGMRIGRI---------- 110
Query: 172 YYISEDVTPIPTDSTRRK 189
EDVTP+P DS R K
Sbjct: 111 ----EDVTPVPHDSCRPK 124
>sp|Q2FT98|RS11_METHJ 30S ribosomal protein S11 OS=Methanospirillum hungatei (strain JF-1
/ DSM 864) GN=rps11 PE=3 SV=1
Length = 131
Score = 145 bits (367), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/135 (54%), Positives = 95/135 (70%), Gaps = 14/135 (10%)
Query: 55 DGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVS 114
+G+ +GVAHI+ASFN+T I VTDL+G ET+ + +GGM VK DR+ESSPYAAM A +V+
Sbjct: 3 EGKEKWGVAHIYASFNNTIITVTDLTGAETITKSSGGMVVKQDRNESSPYAAMQMAGNVA 62
Query: 115 TRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIDLEGLLILGLYYI 174
+E GI LH+K+RA G K ++PGPGAQ+A+RALAR+GM+IG I
Sbjct: 63 QAAREKGIVGLHVKVRAPGRGKQRSPGPGAQAAIRALARAGMRIGLI------------- 109
Query: 175 SEDVTPIPTDSTRRK 189
EDVTP+P DS R K
Sbjct: 110 -EDVTPVPHDSIRPK 123
>sp|Q8TRR0|RS11_METAC 30S ribosomal protein S11 OS=Methanosarcina acetivorans (strain
ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=rps11 PE=3
SV=1
Length = 126
Score = 145 bits (366), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/134 (53%), Positives = 95/134 (70%), Gaps = 14/134 (10%)
Query: 60 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKE 119
+ VAHI +SFN+T I VTD++G ET+ + +GGM VKA RDESSPY AM A ++ + K+
Sbjct: 6 WAVAHIKSSFNNTIITVTDITGAETIAKSSGGMVVKAARDESSPYTAMQMAGQLADQLKD 65
Query: 120 LGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIDLEGLLILGLYYISEDVT 179
GI +HI++RA GGNK ++PGPGAQ+A+RA AR+G++IGRI EDVT
Sbjct: 66 KGINGIHIRVRAPGGNKQRSPGPGAQAAIRAFARAGIRIGRI--------------EDVT 111
Query: 180 PIPTDSTRRKGGRR 193
P+P D TR KGGRR
Sbjct: 112 PVPHDGTRPKGGRR 125
>sp|Q12ZR4|RS11_METBU 30S ribosomal protein S11 OS=Methanococcoides burtonii (strain DSM
6242) GN=rps11 PE=3 SV=1
Length = 126
Score = 145 bits (365), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/135 (54%), Positives = 95/135 (70%), Gaps = 14/135 (10%)
Query: 59 VFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCK 118
++GVAHI SFN+T I VTDL+G ET+ + +GGM VKA RDESSPY AM A ++ +
Sbjct: 5 IWGVAHIKCSFNNTIITVTDLTGAETIAKSSGGMVVKAARDESSPYTAMQMATQLADILR 64
Query: 119 ELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIDLEGLLILGLYYISEDV 178
+ G+ +HIK+RA GGNK ++PGPGAQ+A+RA AR+G++IGRI EDV
Sbjct: 65 DKGLEGVHIKVRAPGGNKQRSPGPGAQAAIRAFARAGVRIGRI--------------EDV 110
Query: 179 TPIPTDSTRRKGGRR 193
TP+P D TR KGGRR
Sbjct: 111 TPVPHDGTRPKGGRR 125
>sp|A3CWH8|RS11_METMJ 30S ribosomal protein S11 OS=Methanoculleus marisnigri (strain ATCC
35101 / DSM 1498 / JR1) GN=rps11 PE=3 SV=1
Length = 129
Score = 145 bits (365), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/129 (55%), Positives = 92/129 (71%), Gaps = 14/129 (10%)
Query: 57 EHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTR 116
E +G+AHIFASFN+T I VTDLSG ET+ + +GGM VK DR+ESSPYAAM A V+
Sbjct: 3 EEKWGIAHIFASFNNTIITVTDLSGAETVTKSSGGMVVKQDRNESSPYAAMQMAIQVAQN 62
Query: 117 CKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIDLEGLLILGLYYISE 176
++ GIT +H+K+RA G K ++PGPGAQ+A+RALAR+GM+IGRI E
Sbjct: 63 ARDKGITGVHVKVRAPGRGKQRSPGPGAQAAIRALARAGMRIGRI--------------E 108
Query: 177 DVTPIPTDS 185
DVTP+P DS
Sbjct: 109 DVTPVPHDS 117
>sp|C6A1B2|RS11_THESM 30S ribosomal protein S11 OS=Thermococcus sibiricus (strain MM 739
/ DSM 12597) GN=rps11 PE=3 SV=1
Length = 139
Score = 144 bits (363), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 75/130 (57%), Positives = 97/130 (74%), Gaps = 14/130 (10%)
Query: 60 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKE 119
+GVAHI+AS+N+T IH+TDL+G ET+ + +GGM VKADRDESSPYAAM+AA+ + E
Sbjct: 16 WGVAHIYASYNNTIIHITDLTGAETISKWSGGMVVKADRDESSPYAAMIAARRAAEEAME 75
Query: 120 LGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIDLEGLLILGLYYISEDVT 179
GI +HIK+RA GG+K+K PGPGAQ+A+RALAR+G++IGR+ EDVT
Sbjct: 76 KGINGVHIKVRAPGGSKSKNPGPGAQAAIRALARAGLRIGRV--------------EDVT 121
Query: 180 PIPTDSTRRK 189
PIP D TR K
Sbjct: 122 PIPHDGTRPK 131
>sp|Q8PV17|RS11_METMA 30S ribosomal protein S11 OS=Methanosarcina mazei (strain ATCC
BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
GN=rps11 PE=3 SV=1
Length = 126
Score = 144 bits (362), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 71/134 (52%), Positives = 95/134 (70%), Gaps = 14/134 (10%)
Query: 60 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKE 119
+ VAHI +SFN+T I VTD++G ET+ + +GGM VKA RDESSPY AM A ++ + ++
Sbjct: 6 WAVAHIKSSFNNTIITVTDITGAETIAKSSGGMVVKAARDESSPYTAMQMAGQLADQLRD 65
Query: 120 LGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIDLEGLLILGLYYISEDVT 179
GI +HI++RA GGNK ++PGPGAQ+A+RA AR+G++IGRI EDVT
Sbjct: 66 KGINGIHIRVRAPGGNKQRSPGPGAQAAIRAFARAGIRIGRI--------------EDVT 111
Query: 180 PIPTDSTRRKGGRR 193
P+P D TR KGGRR
Sbjct: 112 PVPHDGTRPKGGRR 125
>sp|A2SSV8|RS11_METLZ 30S ribosomal protein S11 OS=Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z) GN=rps11 PE=3 SV=1
Length = 131
Score = 143 bits (361), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 71/130 (54%), Positives = 93/130 (71%), Gaps = 14/130 (10%)
Query: 60 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKE 119
+G+AHIFASFN+T I VTDLSG ET+ + +GGM VK R+ESSPYAAM A +++ K+
Sbjct: 8 WGIAHIFASFNNTIITVTDLSGAETICKSSGGMVVKQARNESSPYAAMQMAINIAQASKD 67
Query: 120 LGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIDLEGLLILGLYYISEDVT 179
GIT LHI++RA G + ++PGPGAQ+A+RAL+R+GM+IGRI EDVT
Sbjct: 68 KGITGLHIRVRAPGNGRQRSPGPGAQAAIRALSRAGMRIGRI--------------EDVT 113
Query: 180 PIPTDSTRRK 189
P+P DS R K
Sbjct: 114 PVPHDSIRAK 123
>sp|Q46GC9|RS11_METBF 30S ribosomal protein S11 OS=Methanosarcina barkeri (strain Fusaro
/ DSM 804) GN=rps11 PE=3 SV=1
Length = 126
Score = 143 bits (360), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 71/134 (52%), Positives = 95/134 (70%), Gaps = 14/134 (10%)
Query: 60 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKE 119
+ VAHI +SFN+T I VTD++G ET+ + +GGM VKA RDESSPY AM A ++ + ++
Sbjct: 6 WAVAHIKSSFNNTIITVTDITGAETIAKSSGGMVVKAARDESSPYTAMQMAGQLADQLRD 65
Query: 120 LGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIDLEGLLILGLYYISEDVT 179
GI +HI++RA GGNK ++PGPGAQ+A+RA AR+G++IGRI EDVT
Sbjct: 66 KGIHGIHIRVRAPGGNKQRSPGPGAQAAIRAFARAGIRIGRI--------------EDVT 111
Query: 180 PIPTDSTRRKGGRR 193
P+P D TR KGGRR
Sbjct: 112 PVPHDGTRPKGGRR 125
>sp|Q5JJF3|RS11_PYRKO 30S ribosomal protein S11 OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=rps11 PE=3 SV=1
Length = 140
Score = 143 bits (360), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 74/130 (56%), Positives = 98/130 (75%), Gaps = 14/130 (10%)
Query: 60 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKE 119
+GVAHI++S+N+T IH+TDL+G ET+ R +GGM VKADRDE SPYAAM+AA+ + E
Sbjct: 17 WGVAHIYSSYNNTIIHITDLTGAETISRWSGGMVVKADRDEPSPYAAMIAARRAAEEAME 76
Query: 120 LGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIDLEGLLILGLYYISEDVT 179
GIT +HIK+RA GG+K+K+PGPGAQ+A+RAL+R+G++IGR+ EDVT
Sbjct: 77 KGITGVHIKVRAPGGSKSKSPGPGAQAAIRALSRAGLRIGRV--------------EDVT 122
Query: 180 PIPTDSTRRK 189
PIP D TR K
Sbjct: 123 PIPHDGTRPK 132
>sp|B6YSQ2|RS11_THEON 30S ribosomal protein S11 OS=Thermococcus onnurineus (strain NA1)
GN=rps11 PE=3 SV=1
Length = 139
Score = 142 bits (358), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/130 (56%), Positives = 96/130 (73%), Gaps = 14/130 (10%)
Query: 60 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKE 119
+GVAHI++S+N+T IH+TDL+G ET+ R +GGM VKADRDE SPYAAM+AA+ + E
Sbjct: 16 WGVAHIYSSYNNTIIHITDLTGAETVSRWSGGMVVKADRDEPSPYAAMIAAKRAAEEAME 75
Query: 120 LGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIDLEGLLILGLYYISEDVT 179
G +HIK+RA GG+K+KTPGPGAQ+A+RALAR+G++IGR+ EDVT
Sbjct: 76 KGFVGVHIKVRAPGGSKSKTPGPGAQAAIRALARAGLRIGRV--------------EDVT 121
Query: 180 PIPTDSTRRK 189
PIP D TR K
Sbjct: 122 PIPHDGTRPK 131
>sp|Q6LXM9|RS11_METMP 30S ribosomal protein S11 OS=Methanococcus maripaludis (strain S2 /
LL) GN=rps11 PE=3 SV=1
Length = 124
Score = 141 bits (356), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 67/130 (51%), Positives = 93/130 (71%), Gaps = 14/130 (10%)
Query: 60 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKE 119
+G+ HI+AS+N+T +HVTDL+G ET+ +++GGM V+ RDESSPYAAM AA ++ ++
Sbjct: 5 WGLVHIYASYNNTILHVTDLTGAETIAKVSGGMIVRNQRDESSPYAAMQAAFKIADLMRD 64
Query: 120 LGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIDLEGLLILGLYYISEDVT 179
GI +H+K+RATGG K+K PGPGAQ+A+RAL+R+G++IGRI ED T
Sbjct: 65 KGIDQVHVKVRATGGQKSKNPGPGAQAAIRALSRAGIRIGRI--------------EDAT 110
Query: 180 PIPTDSTRRK 189
PIP D T K
Sbjct: 111 PIPHDGTTPK 120
>sp|A6VGQ8|RS11_METM7 30S ribosomal protein S11 OS=Methanococcus maripaludis (strain C7 /
ATCC BAA-1331) GN=rps11 PE=3 SV=1
Length = 124
Score = 141 bits (356), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 67/130 (51%), Positives = 93/130 (71%), Gaps = 14/130 (10%)
Query: 60 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKE 119
+G+ HI+AS+N+T +HVTDL+G ET+ +++GGM V+ RDESSPYAAM AA ++ ++
Sbjct: 5 WGLVHIYASYNNTILHVTDLTGAETIAKVSGGMIVRNQRDESSPYAAMQAAFKIADLMRD 64
Query: 120 LGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIDLEGLLILGLYYISEDVT 179
GI +H+K+RATGG K+K PGPGAQ+A+RAL+R+G++IGRI ED T
Sbjct: 65 KGIDQVHVKVRATGGQKSKNPGPGAQAAIRALSRAGIRIGRI--------------EDAT 110
Query: 180 PIPTDSTRRK 189
PIP D T K
Sbjct: 111 PIPHDGTTPK 120
>sp|A4FWL3|RS11_METM5 30S ribosomal protein S11 OS=Methanococcus maripaludis (strain C5 /
ATCC BAA-1333) GN=rps11 PE=3 SV=1
Length = 124
Score = 141 bits (356), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 67/130 (51%), Positives = 93/130 (71%), Gaps = 14/130 (10%)
Query: 60 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKE 119
+G+ HI+AS+N+T +HVTDL+G ET+ +++GGM V+ RDESSPYAAM AA ++ ++
Sbjct: 5 WGLVHIYASYNNTILHVTDLTGAETIAKVSGGMIVRNQRDESSPYAAMQAAFKIADLMRD 64
Query: 120 LGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIDLEGLLILGLYYISEDVT 179
GI +H+K+RATGG K+K PGPGAQ+A+RAL+R+G++IGRI ED T
Sbjct: 65 KGIDQVHVKVRATGGQKSKNPGPGAQAAIRALSRAGIRIGRI--------------EDAT 110
Query: 180 PIPTDSTRRK 189
PIP D T K
Sbjct: 111 PIPHDGTTPK 120
>sp|Q8U0E3|RS11_PYRFU 30S ribosomal protein S11 OS=Pyrococcus furiosus (strain ATCC 43587
/ DSM 3638 / JCM 8422 / Vc1) GN=rps11 PE=1 SV=1
Length = 137
Score = 140 bits (354), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 75/130 (57%), Positives = 97/130 (74%), Gaps = 14/130 (10%)
Query: 60 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKE 119
+G+AHI++SFN+T IH+TD++G ET+ R +GGM VKADRDE SPYAAMLAA+ + E
Sbjct: 14 WGIAHIYSSFNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALE 73
Query: 120 LGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIDLEGLLILGLYYISEDVT 179
GI +HI++RA GG+K+KTPGPGAQ+A+RALAR+G+KIGR+ EDVT
Sbjct: 74 KGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRV--------------EDVT 119
Query: 180 PIPTDSTRRK 189
PIP D TR K
Sbjct: 120 PIPHDGTRPK 129
>sp|Q18G55|RS11_HALWD 30S ribosomal protein S11 OS=Haloquadratum walsbyi (strain DSM
16790) GN=rps11 PE=3 SV=1
Length = 131
Score = 140 bits (353), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 70/131 (53%), Positives = 90/131 (68%), Gaps = 14/131 (10%)
Query: 57 EHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTR 116
E +GVAH+ ASFN+T I VTDL+G ET+V+ +GG VK +RDE+SPYAAM A+ V+
Sbjct: 8 EKRWGVAHVHASFNNTLITVTDLTGAETIVKSSGGAVVKQNRDEASPYAAMQMAESVAED 67
Query: 117 CKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIDLEGLLILGLYYISE 176
K GI LH+++R GGN K+PGPGAQ+ +RALAR+G++IGRI E
Sbjct: 68 IKAAGIDGLHVRVRGPGGNGNKSPGPGAQATIRALARAGLEIGRI--------------E 113
Query: 177 DVTPIPTDSTR 187
DVTPIP D TR
Sbjct: 114 DVTPIPHDGTR 124
>sp|A6UPW6|RS11_METVS 30S ribosomal protein S11 OS=Methanococcus vannielii (strain SB /
ATCC 35089 / DSM 1224) GN=rps11 PE=3 SV=1
Length = 124
Score = 140 bits (352), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 66/130 (50%), Positives = 92/130 (70%), Gaps = 14/130 (10%)
Query: 60 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKE 119
+G+ HI+AS+N+T +HVTD++G ET+ +++GGM V+ RDESSPYAAM AA ++ ++
Sbjct: 5 WGLVHIYASYNNTILHVTDVTGAETIAKVSGGMIVRNQRDESSPYAAMQAAFKIAELMRD 64
Query: 120 LGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIDLEGLLILGLYYISEDVT 179
GI +H+K+RA GG K+K PGPGAQ+A+RAL+R+G+KIGRI ED T
Sbjct: 65 KGIDQVHVKVRAAGGQKSKNPGPGAQAAIRALSRAGIKIGRI--------------EDAT 110
Query: 180 PIPTDSTRRK 189
PIP D T K
Sbjct: 111 PIPHDGTTPK 120
>sp|P62011|RS11_PYRHO 30S ribosomal protein S11 OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=rps11 PE=3 SV=1
Length = 137
Score = 140 bits (352), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 74/130 (56%), Positives = 97/130 (74%), Gaps = 14/130 (10%)
Query: 60 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKE 119
+G+AHI++S+N+T IH+TD++G ET+ R +GGM VKADRDE SPYAAMLAA+ + E
Sbjct: 14 WGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALE 73
Query: 120 LGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIDLEGLLILGLYYISEDVT 179
GI +HI++RA GG+K+KTPGPGAQ+A+RALAR+G+KIGR+ EDVT
Sbjct: 74 KGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRV--------------EDVT 119
Query: 180 PIPTDSTRRK 189
PIP D TR K
Sbjct: 120 PIPHDGTRPK 129
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,733,158
Number of Sequences: 539616
Number of extensions: 2972877
Number of successful extensions: 8938
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 661
Number of HSP's successfully gapped in prelim test: 324
Number of HSP's that attempted gapping in prelim test: 6580
Number of HSP's gapped (non-prelim): 985
length of query: 197
length of database: 191,569,459
effective HSP length: 111
effective length of query: 86
effective length of database: 131,672,083
effective search space: 11323799138
effective search space used: 11323799138
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)