Query 039298
Match_columns 197
No_of_seqs 158 out of 799
Neff 4.5
Searched_HMMs 29240
Date Mon Mar 25 14:01:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039298.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039298hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2xzm_K RPS14E; ribosome, trans 100.0 4.4E-60 1.5E-64 385.4 14.8 150 34-197 1-151 (151)
2 3u5c_O RP59A, 40S ribosomal pr 100.0 2.6E-57 8.9E-62 364.1 9.6 136 48-197 2-137 (137)
3 3j20_M 30S ribosomal protein S 100.0 5.8E-52 2E-56 333.0 16.6 128 55-197 9-137 (137)
4 3r8n_K 30S ribosomal protein S 100.0 1E-49 3.5E-54 312.3 13.9 116 56-194 2-117 (117)
5 2vqe_K 30S ribosomal protein S 100.0 2.9E-48 9.8E-53 308.6 13.5 115 57-194 13-127 (129)
6 3bbn_K Ribosomal protein S11; 100.0 1.6E-47 5.6E-52 308.1 11.0 116 56-194 25-140 (140)
7 3r8s_O 50S ribosomal protein L 96.2 0.033 1.1E-06 43.0 9.1 91 60-157 22-115 (116)
8 3v2d_S 50S ribosomal protein L 96.1 0.042 1.5E-06 42.3 9.4 87 60-157 23-111 (112)
9 1vq8_N 50S ribosomal protein L 95.6 0.11 3.6E-06 43.4 10.4 92 61-158 33-130 (187)
10 1ovy_A 50S ribosomal protein L 95.0 0.055 1.9E-06 42.0 6.4 91 60-157 28-119 (120)
11 3j21_O 50S ribosomal protein L 94.7 0.046 1.6E-06 46.1 5.6 90 61-158 33-131 (203)
12 2zjr_L 50S ribosomal protein L 93.3 0.042 1.4E-06 42.5 2.5 87 60-157 26-113 (114)
13 3bbo_Q Ribosomal protein L18; 92.9 0.087 3E-06 43.0 4.0 91 60-157 65-160 (161)
14 2zkr_n 60S ribosomal protein L 88.8 3.1 0.00011 36.9 10.1 93 60-158 48-173 (297)
15 3u5e_D 60S ribosomal protein L 82.8 8.4 0.00029 34.1 9.8 97 60-158 48-173 (297)
16 4a17_M RPL5, 60S ribosomal pro 78.4 9.1 0.00031 33.9 8.5 95 60-158 48-173 (301)
17 3iz5_Q 60S ribosomal protein L 63.7 18 0.00063 32.1 7.0 88 68-157 57-172 (304)
18 4e0a_A BH1408 protein; structu 57.0 38 0.0013 23.3 6.6 47 103-161 104-150 (164)
19 3eo4_A Uncharacterized protein 50.6 58 0.002 22.8 6.8 49 101-161 104-152 (164)
20 2j8m_A Acetyltransferase PA486 44.3 80 0.0027 22.5 6.8 48 101-160 96-143 (172)
21 2jlm_A Putative phosphinothric 44.1 77 0.0026 23.2 6.8 46 103-160 106-151 (182)
22 3g8w_A Lactococcal prophage PS 42.6 83 0.0028 21.9 6.7 47 103-161 97-143 (169)
23 3pzj_A Probable acetyltransfer 40.7 70 0.0024 23.9 6.2 50 100-161 132-181 (209)
24 3d8p_A Acetyltransferase of GN 40.3 86 0.0029 21.4 6.9 47 103-161 94-140 (163)
25 3f8k_A Protein acetyltransfera 40.1 89 0.003 21.5 6.5 47 103-161 89-135 (160)
26 2ae6_A Acetyltransferase, GNAT 39.2 99 0.0034 22.0 6.6 48 102-161 96-143 (166)
27 1vhs_A Similar to phosphinothr 39.1 63 0.0022 23.4 5.6 47 103-161 97-143 (175)
28 2ge3_A Probable acetyltransfer 38.7 81 0.0028 22.3 6.1 47 103-161 101-147 (170)
29 2i79_A Acetyltransferase, GNAT 38.7 1E+02 0.0036 21.9 6.8 47 103-161 102-149 (172)
30 1s3z_A Aminoglycoside 6'-N-ace 38.4 99 0.0034 21.5 7.1 47 103-161 111-157 (165)
31 3igr_A Ribosomal-protein-S5-al 38.4 1E+02 0.0035 21.7 6.9 48 102-161 110-158 (184)
32 2cy2_A TTHA1209, probable acet 38.3 94 0.0032 21.2 6.6 47 103-161 104-150 (174)
33 1on0_A YYCN protein; structura 36.5 50 0.0017 23.6 4.6 46 103-160 104-149 (158)
34 3aoe_E Glutamate dehydrogenase 35.9 40 0.0014 30.7 4.8 57 96-161 191-247 (419)
35 2fe7_A Probable N-acetyltransf 35.9 1E+02 0.0035 21.0 6.1 46 102-159 103-148 (166)
36 3fix_A N-acetyltransferase; te 35.9 1.1E+02 0.0037 21.9 6.4 49 101-161 124-172 (183)
37 3aog_A Glutamate dehydrogenase 34.6 44 0.0015 30.7 4.8 57 96-161 208-264 (440)
38 1mk4_A Hypothetical protein YQ 34.5 1.1E+02 0.0037 20.9 6.1 48 101-160 82-129 (157)
39 1yr0_A AGR_C_1654P, phosphinot 34.1 1.2E+02 0.004 21.7 6.3 48 101-160 97-144 (175)
40 2i6c_A Putative acetyltransfer 33.1 1.1E+02 0.0039 20.7 6.7 48 102-161 90-138 (160)
41 3k92_A NAD-GDH, NAD-specific g 32.6 35 0.0012 31.2 3.8 57 96-161 194-250 (424)
42 3pp9_A Putative streptothricin 32.5 1.4E+02 0.0046 21.3 6.8 47 103-161 116-162 (187)
43 4evy_A Aminoglycoside N(6')-ac 32.0 1.3E+02 0.0045 21.1 6.6 47 102-160 110-156 (166)
44 2oh1_A Acetyltransferase, GNAT 31.8 1.3E+02 0.0045 21.0 6.8 47 103-161 119-165 (179)
45 2x7b_A N-acetyltransferase SSO 31.7 1.4E+02 0.0048 21.3 6.9 47 103-161 103-150 (168)
46 3i9s_A Integron cassette prote 31.3 1.2E+02 0.0042 21.5 6.0 45 103-159 119-163 (183)
47 2vzy_A RV0802C; transferase, G 31.3 1.6E+02 0.0054 21.8 6.9 47 103-161 121-168 (218)
48 2q7b_A Acetyltransferase, GNAT 31.1 1.3E+02 0.0044 21.7 6.2 47 103-161 113-159 (181)
49 3dr6_A YNCA; acetyltransferase 31.0 1.3E+02 0.0043 20.5 6.8 47 103-161 98-144 (174)
50 3i0p_A Malate dehydrogenase; a 30.5 2.9E+02 0.0098 24.5 10.1 54 100-161 91-144 (365)
51 2b5g_A Diamine acetyltransfera 30.4 1.2E+02 0.0042 20.9 5.8 45 103-159 104-148 (171)
52 2eui_A Probable acetyltransfer 29.3 1.1E+02 0.0039 20.3 5.3 47 101-159 92-138 (153)
53 2q02_A Putative cytoplasmic pr 28.5 1.3E+02 0.0045 23.4 6.2 49 111-161 22-70 (272)
54 2g8y_A Malate/L-lactate dehydr 28.3 3.2E+02 0.011 24.4 10.0 54 100-161 110-163 (385)
55 3owc_A Probable acetyltransfer 28.2 1.6E+02 0.0053 20.7 6.8 46 104-161 110-156 (188)
56 2fia_A Acetyltransferase; stru 28.1 1.4E+02 0.0048 20.2 6.3 47 103-161 91-137 (162)
57 3lod_A Putative acyl-COA N-acy 28.0 1.5E+02 0.005 20.3 5.8 49 101-161 88-136 (162)
58 1z4e_A Transcriptional regulat 27.7 1.2E+02 0.0041 20.9 5.3 49 101-161 99-147 (153)
59 1tiq_A Protease synthase and s 27.0 1.8E+02 0.0061 21.0 6.8 47 103-161 106-152 (180)
60 3qxb_A Putative xylose isomera 26.4 1.1E+02 0.0038 24.9 5.6 42 112-161 39-89 (316)
61 2cnt_A Modification of 30S rib 26.4 1.7E+02 0.0058 20.5 6.3 46 103-160 79-124 (160)
62 1yre_A Hypothetical protein PA 26.3 1.8E+02 0.0062 20.8 6.3 48 102-161 111-159 (197)
63 2dxq_A AGR_C_4057P, acetyltran 26.1 1.7E+02 0.0057 20.4 7.2 44 103-158 97-140 (150)
64 2yfq_A Padgh, NAD-GDH, NAD-spe 25.5 40 0.0014 30.7 2.9 57 96-161 185-241 (421)
65 3fbu_A Acetyltransferase, GNAT 25.3 1.7E+02 0.0058 20.2 7.4 47 103-161 98-145 (168)
66 1v9l_A Glutamate dehydrogenase 25.3 74 0.0025 28.9 4.6 56 97-161 184-239 (421)
67 3kws_A Putative sugar isomeras 25.0 52 0.0018 26.4 3.2 43 111-161 41-83 (287)
68 2r1i_A GCN5-related N-acetyltr 24.7 1.5E+02 0.0052 20.4 5.4 46 103-160 113-158 (172)
69 3fau_A NEDD4-binding protein 2 24.3 1.7E+02 0.0058 19.8 6.9 67 102-170 9-80 (82)
70 1ufh_A YYCN protein; alpha and 24.3 1.2E+02 0.004 21.4 4.8 45 103-159 128-172 (180)
71 1yvk_A Hypothetical protein BS 24.2 2E+02 0.0068 20.6 6.8 47 103-161 79-125 (163)
72 1s7k_A Acetyl transferase; GNA 24.1 1.8E+02 0.0062 20.1 6.8 48 102-161 110-158 (182)
73 3mw9_A GDH 1, glutamate dehydr 24.1 87 0.003 29.4 4.9 60 96-163 209-275 (501)
74 4fcc_A Glutamate dehydrogenase 23.4 74 0.0025 29.4 4.2 58 95-161 207-264 (450)
75 2fsr_A Acetyltransferase; alph 23.2 2E+02 0.0068 21.1 6.1 47 102-160 126-173 (195)
76 1qsm_A HPA2 histone acetyltran 22.7 1E+02 0.0035 20.6 4.0 45 103-159 99-143 (152)
77 1nsl_A Probable acetyltransfer 22.6 2E+02 0.0068 20.0 5.8 47 103-161 109-156 (184)
78 2fck_A Ribosomal-protein-serin 22.4 2E+02 0.0068 19.9 7.4 47 103-161 113-160 (181)
79 2r48_A Phosphotransferase syst 22.2 87 0.003 23.3 3.7 29 105-134 17-45 (106)
80 2r4q_A Phosphotransferase syst 22.2 88 0.003 23.3 3.8 28 106-134 18-45 (106)
81 2bei_A Diamine acetyltransfera 22.2 2.2E+02 0.0075 20.3 6.1 44 103-158 104-147 (170)
82 4ava_A Lysine acetyltransferas 21.9 1.4E+02 0.005 24.1 5.4 47 102-160 247-293 (333)
83 3r9f_A MCCE protein; microcin 21.6 2.2E+02 0.0075 20.1 6.3 48 102-161 118-166 (188)
84 2bue_A AAC(6')-IB; GNAT, trans 21.3 2.1E+02 0.0071 20.3 5.7 47 103-161 130-177 (202)
85 3obe_A Sugar phosphate isomera 21.1 1.7E+02 0.0058 24.0 5.7 50 110-161 38-95 (305)
86 2pdo_A Acetyltransferase YPEA; 21.1 2.1E+02 0.0071 19.6 6.1 45 103-159 85-129 (144)
87 2qkp_A Uncharacterized protein 20.9 1.7E+02 0.0059 21.6 5.3 22 160-182 112-134 (151)
88 1y9k_A IAA acetyltransferase; 20.8 2.1E+02 0.0073 19.7 6.8 47 103-161 77-123 (157)
89 1i60_A IOLI protein; beta barr 20.7 1.2E+02 0.0042 23.5 4.6 43 111-161 17-65 (278)
90 2tmg_A Protein (glutamate dehy 20.4 72 0.0024 29.0 3.5 56 97-161 183-239 (415)
91 2bma_A Glutamate dehydrogenase 20.3 65 0.0022 29.9 3.2 56 97-161 226-281 (470)
92 2zds_A Putative DNA-binding pr 20.2 2.1E+02 0.0073 23.0 6.1 45 111-161 18-70 (340)
No 1
>2xzm_K RPS14E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_K 3j0o_K 3j0l_K 2zkq_k 3iz6_K 3jyv_K*
Probab=100.00 E-value=4.4e-60 Score=385.43 Aligned_cols=150 Identities=77% Similarity=1.143 Sum_probs=137.2
Q ss_pred cccccccCccccccccCCc-ccCCceeeeEEEEEccCCCeEEEEEcCCCCeEEEEeeccCcccCCCCCCCHHHHHHHHHH
Q 039298 34 MSRRKNREPKEENVTLGPA-VRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQD 112 (197)
Q Consensus 34 ~~~rk~k~~k~e~islg~~-~~e~~~~~gi~hI~ss~NNTiitlTD~~G~~~~~~SsG~~g~k~~rrkst~~Aa~~aa~~ 112 (197)
|+|+|.++++|++++|||+ +.++++++|++||++|||||||||||++|++++|||||+++||++++|+||||||+||++
T Consensus 1 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~gi~hI~asfNNTiVtiTD~~G~~~~~~ssgg~~~k~~r~ksTpyAAq~aa~~ 80 (151)
T 2xzm_K 1 MAPKKTAPVQKEVISYGPPNVGANENVFGVCHIMATWNDTFIHVTDLSGRETLVRVTGGMKVKADREESSPYAAMQAAID 80 (151)
T ss_dssp -----------CCCCCSCSCCCTTCCCEEEEEEEBCSSCBCCEEECTTCCSEEEECCHHHHCSSGGGGSCHHHHHHHHHH
T ss_pred CCCccccccccceeecCCccccCCCeeeeEEEEEccCCCEEEEEECCCCCEEEEEecCcceEeCCCCcCCHHHHHHHHHH
Confidence 6888888866679999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEEEecccceeccccccccccCCCCCCCCCCCCCC
Q 039298 113 VSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIDLEGLLILGLYYISEDVTPIPTDSTRRKGGR 192 (197)
Q Consensus 113 v~~k~~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~I~~~~~~~~~l~~~~~DvTpiPhnGcR~kK~R 192 (197)
++++|+++||+.|+|+|+|+|||++||||+|||+|||+|+++||+|.+| +|+||||||||||||+|
T Consensus 81 ~a~~a~e~Gi~~v~V~vkG~gg~~~kgpG~GresairaL~~~GlkI~~I--------------~DvTpiPhNGcRp~K~R 146 (151)
T 2xzm_K 81 VVNRCKELKINALHIKLRAKGGVETKQPGPGAQSALRALARSGMKIGRI--------------EDVTPIPTDSTRREGGR 146 (151)
T ss_dssp HHHHHHHHTCCEEEEEEECCCTTSCCSCCSHHHHHHHHHHHTSCEEEEE--------------EECCCCCSSCCCCSSCT
T ss_pred HHHHHHHcCCeEEEEEEEcCCCCCccCCCccHHHHHHHHHHCCCEEEEE--------------EEeCCCCCCCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999 99999999999999999
Q ss_pred CCCCC
Q 039298 193 RGRRL 197 (197)
Q Consensus 193 R~~~~ 197 (197)
|+||+
T Consensus 147 Rvr~~ 151 (151)
T 2xzm_K 147 RGRRL 151 (151)
T ss_dssp TCSCC
T ss_pred CCCCC
Confidence 99996
No 2
>3u5c_O RP59A, 40S ribosomal protein S14-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_K 3o30_H 3o2z_H 3u5g_O 1s1h_K 3jyv_K*
Probab=100.00 E-value=2.6e-57 Score=364.06 Aligned_cols=136 Identities=76% Similarity=1.213 Sum_probs=125.8
Q ss_pred ccCCcccCCceeeeEEEEEccCCCeEEEEEcCCCCeEEEEeeccCcccCCCCCCCHHHHHHHHHHHHHHHHHcCccEEEE
Q 039298 48 TLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHI 127 (197)
Q Consensus 48 slg~~~~e~~~~~gi~hI~ss~NNTiitlTD~~G~~~~~~SsG~~g~k~~rrkst~~Aa~~aa~~v~~k~~elGi~~l~V 127 (197)
|--+|+.|+++++||+||++|||||||||||++|++++|+|+|+||||++++|+||||||+||++++++|+|+||+.|+|
T Consensus 2 ~~~~~~~~~~~~~gi~hI~asfNNTivtvTD~~G~~~~~~ssG~~gfKg~r~ksTpyAAq~aa~~~a~~a~e~Gi~~v~V 81 (137)
T 3u5c_O 2 SNVVQARDNSQVFGVARIYASFNDTFVHVTDLSGKETIARVTGGMKVKADRDESSPYAAMLAAQDVAAKCKEVGITAVHV 81 (137)
T ss_dssp ---------CCCEEECCEEEETTEEEECCEETTSSSCCCCCBTTTTSCCSTTTTCHHHHHHHHHHHHHHHHHHTCCEEEC
T ss_pred CccceeccCceeeEEEEEEccCCCEEEEEEcCCCCEEEEEeCCCcEEeCCcccCCHHHHHHHHHHHHHHHHHcCCeEEEE
Confidence 33468899999999999999999999999999999999999999999999989999999999999999999999999999
Q ss_pred EEEeeCCCCccCCCCChHHHHHHHHhCCcEEEEEecccceeccccccccccCCCCCCCCCCCCCCCCCCC
Q 039298 128 KLRATGGNKTKTPGPGAQSALRALARSGMKIGRIDLEGLLILGLYYISEDVTPIPTDSTRRKGGRRGRRL 197 (197)
Q Consensus 128 ~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~I~~~~~~~~~l~~~~~DvTpiPhnGcR~kK~RR~~~~ 197 (197)
+|||+|||++||||||||+|||+|+++||+|.+| +|+||||||||||||+||+||+
T Consensus 82 ~vra~gg~~~kgpG~Gr~sairaL~~~Gl~I~~I--------------~DvTpiPhnGcRp~K~RR~~~~ 137 (137)
T 3u5c_O 82 KIRATGGTRTKTPGPGGQAALRALARSGLRIGRI--------------EDVTPVPSDSTRKKGGRRGRRL 137 (137)
T ss_dssp EEECSCTTSCCSCCGGGHHHHHHHHTTTCEECCC--------------EECCCCCSSCSCCTTCTTCCCC
T ss_pred EEeccCCCcccCCCcchHHHHHHHHhCCCEEEEE--------------EEcCCCCCCCCCCCCCCCCCCC
Confidence 9999999999999999999999999999999999 9999999999999999999996
No 3
>3j20_M 30S ribosomal protein S11P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=100.00 E-value=5.8e-52 Score=333.02 Aligned_cols=128 Identities=56% Similarity=0.925 Sum_probs=119.5
Q ss_pred CCceeeeEEEEEccCCCeEEEEEcCCCC-eEEEEeeccCcccCCCCCCCHHHHHHHHHHHHHHHHHcCccEEEEEEEeeC
Q 039298 55 DGEHVFGVAHIFASFNDTFIHVTDLSGR-ETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRATG 133 (197)
Q Consensus 55 e~~~~~gi~hI~ss~NNTiitlTD~~G~-~~~~~SsG~~g~k~~rrkst~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~g 133 (197)
|+++++||+||++|||||||||||++|+ ++.|+|+|.+||++. +|+||||||+||++++++|+++||+.|+|+|+|+|
T Consensus 9 ~~~~~~gi~hI~asfNNTivtiTD~~G~~~i~~~S~G~~gfkg~-~ksTp~AA~~aa~~~~~~a~e~Gi~~v~V~vkG~g 87 (137)
T 3j20_M 9 KKKEKWGIAHIYSSFNNTIIHITDITGAETISRWSGGMVVKADR-DEPSPYAAMLAARRAAEEALEKGIVGVHIRVRAPG 87 (137)
T ss_dssp SSCCEEEEEEEEECSSCEEEEEEESSSCSEEEEEEGGGTCSCTT-TSSSHHHHHHHHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred ccCCcceEEEEEcCCCCEEEEEEcCCCCEEEEEEccceeeecCC-ccCCHHHHHHHHHHHHHHHHHcCCeEEEEEEECCC
Confidence 4567999999999999999999999996 776666666666655 49999999999999999999999999999999999
Q ss_pred CCCccCCCCChHHHHHHHHhCCcEEEEEecccceeccccccccccCCCCCCCCCCCCCCCCCCC
Q 039298 134 GNKTKTPGPGAQSALRALARSGMKIGRIDLEGLLILGLYYISEDVTPIPTDSTRRKGGRRGRRL 197 (197)
Q Consensus 134 g~~~KG~G~Gr~~alraL~~~GlkI~~I~~~~~~~~~l~~~~~DvTpiPhnGcR~kK~RR~~~~ 197 (197)
||++|.||||||+|||+|+++||+|.+| +|+|||||||||||+.||+|||
T Consensus 88 g~~~~~pG~GresairaL~~~Gl~I~~I--------------~DvTpiPhnGcRp~g~rr~rrv 137 (137)
T 3j20_M 88 GSKSKTPGPGAQAAIRALARAGLKIGRV--------------EDVTPIPHDGTRPKGGRRGRRV 137 (137)
T ss_dssp SSSCCSCCTHHHHHHHHHHHHTCEEEEE--------------EECCCCCSSCCCCSCCSSSSCC
T ss_pred CCCCcCCCCcHHHHHHHHHhCCCEEEEE--------------EEcCCCCCCCCCCCCCCCCCCC
Confidence 9999999999999999999999999999 9999999999999999999996
No 4
>3r8n_K 30S ribosomal protein S11; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_K 3fih_K* 3iy8_K 3j18_K* 2wwl_K 3oar_K 3oaq_K 3ofb_K 3ofa_K 3ofp_K 3ofx_K 3ofy_K 3ofo_K 3r8o_K 4a2i_K 4gd1_K 4gd2_K 3i1m_K 1vs7_K* 3e1a_C ...
Probab=100.00 E-value=1e-49 Score=312.34 Aligned_cols=116 Identities=41% Similarity=0.647 Sum_probs=112.5
Q ss_pred CceeeeEEEEEccCCCeEEEEEcCCCCeEEEEeeccCcccCCCCCCCHHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCC
Q 039298 56 GEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRATGGN 135 (197)
Q Consensus 56 ~~~~~gi~hI~ss~NNTiitlTD~~G~~~~~~SsG~~g~k~~rrkst~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~ 135 (197)
+.+.+||+||++||||||||+||++|+++.|+|+|++|||+++ |+||||||+||++++++|+|+||+.|+|+|
T Consensus 2 ~~~~~gi~hI~as~NNTivtiTD~~G~~i~~~S~G~~gfKg~r-k~tp~AA~~aa~~~~~~~~~~Gi~~v~v~v------ 74 (117)
T 3r8n_K 2 KQVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSR-KSTPFAAQVAAERCADAVKEYGIKNLEVMV------ 74 (117)
T ss_dssp CCCCEEEEEEEECSSCEEEEEECTTSCCSEEEETGGGSCCGGG-GSSHHHHHHHHHHHHHHHTTSCCCEEEEEE------
T ss_pred cccceeEEEEEcccCCEEEEEEcCCCCEEEEEcCCccccCCCc-cCCHHHHHHHHHHHHHHHHHhCCcEEEEEE------
Confidence 4577999999999999999999999999999999999999888 999999999999999999999999999999
Q ss_pred CccCCCCChHHHHHHHHhCCcEEEEEecccceeccccccccccCCCCCCCCCCCCCCCC
Q 039298 136 KTKTPGPGAQSALRALARSGMKIGRIDLEGLLILGLYYISEDVTPIPTDSTRRKGGRRG 194 (197)
Q Consensus 136 ~~KG~G~Gr~~alraL~~~GlkI~~I~~~~~~~~~l~~~~~DvTpiPhnGcR~kK~RR~ 194 (197)
||||+|||+|||+|+++|++|.+| +|+||||||||||||+||+
T Consensus 75 --kG~G~Gr~~airaL~~~Gl~I~~I--------------~DvTpiphnGcRp~K~RRv 117 (117)
T 3r8n_K 75 --KGPGPGRESTIRALNAAGFRITNI--------------TDVTPIPHNGCRPPKKRRV 117 (117)
T ss_dssp --ECSSSSTTHHHHHHHHTTCEEEEE--------------EECCCCCSSCSCCCCCCCC
T ss_pred --eCCCccHHHHHHHHHhCCCEEEEE--------------EEeCCCCCCCCCCCCCCCC
Confidence 999999999999999999999999 9999999999999999985
No 5
>2vqe_K 30S ribosomal protein S11, 30S ribosomal protein S6; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.55.4.1 PDB: 1gix_N* 1hnw_K* 1hnx_K* 1hnz_K* 1hr0_K 1ibk_K* 1ibl_K* 1ibm_K 1j5e_K 1jgo_N* 1jgp_N* 1jgq_N* 1ml5_N* 1n32_K* 1n33_K* 1n34_K 1n36_K 1xmo_K* 1xmq_K* 1xnq_K* ...
Probab=100.00 E-value=2.9e-48 Score=308.65 Aligned_cols=115 Identities=33% Similarity=0.518 Sum_probs=112.0
Q ss_pred ceeeeEEEEEccCCCeEEEEEcCCCCeEEEEeeccCcccCCCCCCCHHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCC
Q 039298 57 EHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRATGGNK 136 (197)
Q Consensus 57 ~~~~gi~hI~ss~NNTiitlTD~~G~~~~~~SsG~~g~k~~rrkst~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~ 136 (197)
.+..|++||++|||||||||||++|+++.|+|+|++|||+++ |+||||||+||++++++|+|+||+.|+|+|
T Consensus 13 ~~~~gi~hI~as~NNTivtiTd~~G~~~~~~SaG~~gfKg~r-k~tp~AA~~aa~~~~~~~~~~Gi~~v~V~v------- 84 (129)
T 2vqe_K 13 QVASGRAYIHASYNNTIVTITDPDGNPITWSSGGVIGYKGSR-KGTPYAAQLAALDAAKKAMAYGMQSVDVIV------- 84 (129)
T ss_dssp CCSEEEEEEEECSSCEEEEEECTTSCEEEECCTTTTTCCSGG-GGSHHHHHHHHHHHHHHHHTTTCCEEEEEE-------
T ss_pred cccceEEEEEecCCCEEEEEEcCCCCEEEEEeccceeEcCCC-cCCHHHHHHHHHHHHHHHHHhCCeEEEEEE-------
Confidence 466899999999999999999999999999999999999998 999999999999999999999999999999
Q ss_pred ccCCCCChHHHHHHHHhCCcEEEEEecccceeccccccccccCCCCCCCCCCCCCCCC
Q 039298 137 TKTPGPGAQSALRALARSGMKIGRIDLEGLLILGLYYISEDVTPIPTDSTRRKGGRRG 194 (197)
Q Consensus 137 ~KG~G~Gr~~alraL~~~GlkI~~I~~~~~~~~~l~~~~~DvTpiPhnGcR~kK~RR~ 194 (197)
+|||+|||+|||+|+.+|++|.+| +|+||||||||||||+||+
T Consensus 85 -kG~G~Gre~airaL~~~Gl~I~~I--------------~DvTpiPhnGcRp~K~RRv 127 (129)
T 2vqe_K 85 -RGTGAGREQAIRALQASGLQVKSI--------------VDDTPVPHNGCRPKKKFRK 127 (129)
T ss_dssp -ESCCTTHHHHHHHHHTSSSEEEEC--------------EECCCCCSSCSCCCGGGCS
T ss_pred -ECCCCCHHHHHHHHHHCCCEEEEE--------------EEcCCCCCCCCCCCCCCCC
Confidence 999999999999999999999999 9999999999999999986
No 6
>3bbn_K Ribosomal protein S11; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=100.00 E-value=1.6e-47 Score=308.13 Aligned_cols=116 Identities=34% Similarity=0.527 Sum_probs=112.5
Q ss_pred CceeeeEEEEEccCCCeEEEEEcCCCCeEEEEeeccCcccCCCCCCCHHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCC
Q 039298 56 GEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRATGGN 135 (197)
Q Consensus 56 ~~~~~gi~hI~ss~NNTiitlTD~~G~~~~~~SsG~~g~k~~rrkst~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~ 135 (197)
+.+..|++||++|||||||||||++|+++.|+|+|++|||+++ |+||||||+||++++++|+|+||+.|+|+|
T Consensus 25 k~~~~gi~hI~as~NNTivtiTD~~G~~i~~~SaG~~GfKg~r-ksTp~AA~~aa~~~~~~a~e~Gi~~v~V~v------ 97 (140)
T 3bbn_K 25 RKIPKGVIHVQASFNNTIVTVTDVRGRVVSWASAGTCGFRGTK-RGTPFAAQTAAGNAIRTVVEQGMQRAEVMI------ 97 (140)
T ss_dssp CCCCCCEEEEEECSSCEEEEEECSSSCEEEEEETTTSSCCTTS-CSSHHHHHHHHTSGGGTSTTTCCCEEEEEE------
T ss_pred ccceeeEEEEEecCCCEEEEEEcCCCCEEEEEeccceeEcccc-cCCHHHHHHHHHHHHHHHHHhCCeEEEEEE------
Confidence 4567899999999999999999999999999999999999998 999999999999999999999999999999
Q ss_pred CccCCCCChHHHHHHHHhCCcEEEEEecccceeccccccccccCCCCCCCCCCCCCCCC
Q 039298 136 KTKTPGPGAQSALRALARSGMKIGRIDLEGLLILGLYYISEDVTPIPTDSTRRKGGRRG 194 (197)
Q Consensus 136 ~~KG~G~Gr~~alraL~~~GlkI~~I~~~~~~~~~l~~~~~DvTpiPhnGcR~kK~RR~ 194 (197)
+|||+|||+|||+|+.+|++|.+| +|+||||||||||||+||+
T Consensus 98 --kG~G~GReaairaL~~~Gl~I~~I--------------~DvTpiPhnGcRppK~RRv 140 (140)
T 3bbn_K 98 --KGPGLGRDAALRAIRRSGILLSFV--------------RDVTPMPHNGCRPPKKRRV 140 (140)
T ss_dssp --ESCSTTSSHHHHHHHTTTCEEEEE--------------EECCCCCCSCCCCCCCCCC
T ss_pred --ECCCCcHHHHHHHHHHCCCEEEEE--------------EEcCCCCCCCCCCCCCCCC
Confidence 999999999999999999999999 9999999999999999985
No 7
>3r8s_O 50S ribosomal protein L18; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 3fik_O 3j19_O 2wwq_O 3oat_O* 3oas_O* 3ofd_O 3ofc_O 3ofr_O* 3ofz_O* 3og0_O 3ofq_O 3r8t_O 3i1n_O 1p85_M 1p86_M 1vs8_O 1vs6_O 2aw4_O 2awb_O 1vt2_O ...
Probab=96.18 E-value=0.033 Score=42.98 Aligned_cols=91 Identities=16% Similarity=0.154 Sum_probs=60.5
Q ss_pred eeEEEEEccCCCeEEEEEcCCCC-eEEEEeeccCcccCCC-CCCCHHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCCc
Q 039298 60 FGVAHIFASFNDTFIHVTDLSGR-ETLVRITGGMKVKADR-DESSPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKT 137 (197)
Q Consensus 60 ~gi~hI~ss~NNTiitlTD~~G~-~~~~~SsG~~g~k~~r-rkst~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~~ 137 (197)
..-+-|+-|.+++...|.|..+. ++.+.|+--..+++.. ..+.--||+.+++.++++|++.||+.+..-. ||...
T Consensus 22 rpRL~V~rSnkhIyAQiidd~~g~tlasAST~e~~~~~~~~~~~n~~AA~~vG~llA~Ral~~GI~~vvfDr---gg~~y 98 (116)
T 3r8s_O 22 ATRLVVHRTPRHIYAQVIAPNGSEVLVAASTVEKAIAEQLKYTGNKDAAAAVGKAVAERALEKGIKDVSFDR---SGFQY 98 (116)
T ss_dssp CCEEEEEECSSCEEEEEECTTSSCEEEECCSSSHHHHTTCSCSSSHHHHHHHHHHHHHHHHTTTCCCCEEEC---TTSCS
T ss_pred CCEEEEEEeCCEEEEEEEEcCCCeEEEEEeeCchhhccccCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEec---CCCcc
Confidence 45677889999999999997665 4444444333343311 1345678899999999999999999766543 33332
Q ss_pred cCCCCCh-HHHHHHHHhCCcE
Q 039298 138 KTPGPGA-QSALRALARSGMK 157 (197)
Q Consensus 138 KG~G~Gr-~~alraL~~~Glk 157 (197)
-|| +++..++...||+
T Consensus 99 ----hGrV~Ala~~are~Gl~ 115 (116)
T 3r8s_O 99 ----HGRVQALADAAREAGLQ 115 (116)
T ss_dssp ----SSHHHHHHHHHHHTTCC
T ss_pred ----cHHHHHHHHHHHHhCCC
Confidence 144 3355666667765
No 8
>3v2d_S 50S ribosomal protein L18; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_M 2hgj_R 2hgq_R 2hgu_R 1vsa_M 2j03_S 2jl6_S 2jl8_S 2v47_S 2v49_S 2wdi_S 2wdj_S 2wdl_S 2wdn_S 2wh2_S 2wh4_S 2wrj_S 2wrl_S 2wro_S 2wrr_S ...
Probab=96.11 E-value=0.042 Score=42.29 Aligned_cols=87 Identities=16% Similarity=0.213 Sum_probs=61.2
Q ss_pred eeEEEEEccCCCeEEEEEcCCCCeE-EEEeeccCcccCCCCCCCHHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCCcc
Q 039298 60 FGVAHIFASFNDTFIHVTDLSGRET-LVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTK 138 (197)
Q Consensus 60 ~gi~hI~ss~NNTiitlTD~~G~~~-~~~SsG~~g~k~~rrkst~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~~K 138 (197)
..-+-|+-|.+++...|.|..|..+ .+.|+--..++ .+.--||+.+++.++++|++.||+.+..-. ||...
T Consensus 23 rpRL~V~rSnkhiyAQiidd~~~~tlasAsT~e~~~k----~~n~~AA~~vG~llA~ra~~~GI~~vvfDr---gg~~y- 94 (112)
T 3v2d_S 23 RLRLSVFRSLKHIYAQIIDDEKGVTLVSASSLALKLK----GNKTEVARQVGRALAEKALALGIKQVAFDR---GPYKY- 94 (112)
T ss_dssp CCEEEEEECSSCEEEEEEETTTTEEEEEEETTTTTCC----CCHHHHHHHHHHHHHHHHHTTTCCBCEEEC---TTSCS-
T ss_pred CCEEEEEEeCCeEEEEEEecCCCeEEEEEEecchhcc----CCCHHHHHHHHHHHHHHHHHCCCCEEEEec---CCCcc-
Confidence 5677889999999999998776654 44444444443 344568899999999999999999764433 33333
Q ss_pred CCCCCh-HHHHHHHHhCCcE
Q 039298 139 TPGPGA-QSALRALARSGMK 157 (197)
Q Consensus 139 G~G~Gr-~~alraL~~~Glk 157 (197)
+ || +++..++...||+
T Consensus 95 --h-GrV~Ala~~are~GL~ 111 (112)
T 3v2d_S 95 --H-GRVKALAEGAREGGLE 111 (112)
T ss_dssp --C-SSTTHHHHHHHHTTCB
T ss_pred --c-HHHHHHHHHHHHcCCC
Confidence 1 33 4567777778875
No 9
>1vq8_N 50S ribosomal protein L18P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: c.55.4.1 PDB: 1vq4_N* 1vq5_N* 1vq6_N* 1vq7_N* 1s72_N* 1vq9_N* 1vqk_N* 1vql_N* 1vqm_N* 1vqn_N* 1vqo_N* 1vqp_N* 1yhq_N* 1yi2_N* 1yij_N* 1yit_N* 1yj9_N* 1yjn_N* 1yjw_N* 2otj_N* ...
Probab=95.60 E-value=0.11 Score=43.36 Aligned_cols=92 Identities=16% Similarity=0.184 Sum_probs=62.3
Q ss_pred eEEEEEccCCCeEEEEE--cCCCCeEEEEeec-cCcccCCC--CCCCHHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCC
Q 039298 61 GVAHIFASFNDTFIHVT--DLSGRETLVRITG-GMKVKADR--DESSPYAAMLAAQDVSTRCKELGITALHIKLRATGGN 135 (197)
Q Consensus 61 gi~hI~ss~NNTiitlT--D~~G~~~~~~SsG-~~g~k~~r--rkst~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~ 135 (197)
..+-|+-|.+++++.|. |..|..+++..+. -.. +.+- ....--||..++..++++|++.||+.+..-. ||.
T Consensus 33 pRL~V~rSnkhIyAQII~~dd~~~~tlasAsT~e~~-k~~~k~~~~N~~AA~~vG~llA~Ral~kGI~~vvfDr---gg~ 108 (187)
T 1vq8_N 33 PRLVARKSNKHVRAQLVTLGPNGDDTLASAHSSDLA-EYGWEAPTGNMPSAYLTGLLAGLRAQEAGVEEAVLDI---GLN 108 (187)
T ss_dssp CEEEEEECSSCEEEEEEECCTTSCEEEEEEESGGGG-GGTCCSCSSSHHHHHHHHHHHHHHHHHTTCCBCEEEC---TTS
T ss_pred CEEEEEEeCCcEEEEEEEecCCCCEEEEEEEccchh-ccccccCCCcHHHHHHHHHHHHHHHHHCCCCEEEEcC---CCc
Confidence 56778899999999999 7777755544333 222 2111 1355678899999999999999999864333 333
Q ss_pred CccCCCCCh-HHHHHHHHhCCcEE
Q 039298 136 KTKTPGPGA-QSALRALARSGMKI 158 (197)
Q Consensus 136 ~~KG~G~Gr-~~alraL~~~GlkI 158 (197)
+.. .| || .+++++....||++
T Consensus 109 ~yh-~G-gRV~Ala~gAre~GL~f 130 (187)
T 1vq8_N 109 SPT-PG-SKVFAIQEGAIDAGLDI 130 (187)
T ss_dssp CCC-TT-CHHHHHHHHHHHTTCBC
T ss_pred eec-cc-hHHHHHHHHhhcCCEec
Confidence 321 11 34 56788888888875
No 10
>1ovy_A 50S ribosomal protein L18; ribosome; NMR {Geobacillus stearothermophilus} SCOP: c.55.4.1
Probab=94.98 E-value=0.055 Score=42.04 Aligned_cols=91 Identities=20% Similarity=0.185 Sum_probs=60.0
Q ss_pred eeEEEEEccCCCeEEEEEcCCCCeEEE-EeeccCcccCCCCCCCHHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCCcc
Q 039298 60 FGVAHIFASFNDTFIHVTDLSGRETLV-RITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTK 138 (197)
Q Consensus 60 ~gi~hI~ss~NNTiitlTD~~G~~~~~-~SsG~~g~k~~rrkst~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~~K 138 (197)
..-+-|+-|.++++..|.|..|..+++ .|+=-..++... ...--||+.+++.++++|++.||+.+. + ..||...
T Consensus 28 rpRL~V~rSnkhIyAQiidd~~~~tl~sAsT~e~~~~~~~-~~n~~AA~~vG~llA~Ral~~GI~~vv--f-Drgg~~y- 102 (120)
T 1ovy_A 28 RPRLSVFRSNKHIYAQIIDDTKSATIVSASTLDKEFGLDS-TNNIEAAKKVGELVAKRALEKGIKQVV--F-DRGGYLY- 102 (120)
T ss_dssp CCSEEEEEETTEEEEEEECCSSCCCEEEESTTSTTTCSSC-TTSHHHHHHHHHHHHHHHHHHSSSCCC--C-CSTTCSS-
T ss_pred CCEEEEEEeCCeEEEEEEEcCCCEEEEEEecCchhhCcCC-CCcHHHHHHHHHHHHHHHHHCCCCEEE--E-ecCCccc-
Confidence 446778899999999999887665444 444233344222 355778899999999999999999653 4 2344333
Q ss_pred CCCCChHHHHHHHHhCCcE
Q 039298 139 TPGPGAQSALRALARSGMK 157 (197)
Q Consensus 139 G~G~Gr~~alraL~~~Glk 157 (197)
+--=+++.++....|++
T Consensus 103 --hgrV~ala~~are~GL~ 119 (120)
T 1ovy_A 103 --HGRVKALADAAREAGLE 119 (120)
T ss_dssp --CSSTHHHHHHHHHHHCC
T ss_pred --cHHHHHHHHHHHHhCCc
Confidence 22234566777666664
No 11
>3j21_O 50S ribosomal protein L18P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=94.68 E-value=0.046 Score=46.08 Aligned_cols=90 Identities=16% Similarity=0.176 Sum_probs=60.1
Q ss_pred eEEEEEccCCCeEEEEEc--CCCCeEE-EEeeccCcccCC--CCCCCHHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCC
Q 039298 61 GVAHIFASFNDTFIHVTD--LSGRETL-VRITGGMKVKAD--RDESSPYAAMLAAQDVSTRCKELGITALHIKLRATGGN 135 (197)
Q Consensus 61 gi~hI~ss~NNTiitlTD--~~G~~~~-~~SsG~~g~k~~--rrkst~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~ 135 (197)
.-+-|+-|.+++++.|.| ..|..++ +.|+--...+.+ .....--||+.++..++++|++.||+.+.+-.
T Consensus 33 pRL~V~rSnkhIyAQIId~d~~g~~tLasAST~El~lk~g~~~~~~N~~AA~~vG~llA~Ral~kGI~~vvfDr------ 106 (203)
T 3j21_O 33 PRLVVRKSLNHHIAQIIVYDPKGDRTLVSAHTRELIRDFGWKGHCGNTPSAYLLGLLIGYKAKQAGIEEAILDI------ 106 (203)
T ss_dssp CEEEEEECSSCEEEEEEECCTTSCEEEEEECSTTTSSSSSCCSCTTSHHHHHHHHHHSSSSTTSSCCCCCEEEC------
T ss_pred CEEEEEEeCCeEEEEEEEecCCCCeEEEEEEccchhhhhcccCCCCcHHHHHHHHHHHHHHHHhCCCCEEEEec------
Confidence 566788999999999996 7755444 444433322211 11345678899999999999999999765444
Q ss_pred CccCCCC---Ch-HHHHHHHHhCCcEE
Q 039298 136 KTKTPGP---GA-QSALRALARSGMKI 158 (197)
Q Consensus 136 ~~KG~G~---Gr-~~alraL~~~GlkI 158 (197)
.|+=. || .+++++....||+|
T Consensus 107 --gg~~y~~hgRV~Ala~gAre~GL~i 131 (203)
T 3j21_O 107 --GLHPPVRGSSVFAVLKGAVDAGLNV 131 (203)
T ss_dssp --CSSCCCTTSHHHHHHHHHHHHTCCC
T ss_pred --CcceeccCcchhhhhhhcccCCeec
Confidence 33333 44 45677777778764
No 12
>2zjr_L 50S ribosomal protein L18; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: c.55.4.1 PDB: 1sm1_M* 2zjp_L* 2zjq_L 1nkw_M 3cf5_L* 3dll_L* 3pio_L* 3pip_L* 1nwy_M* 1nwx_M* 1xbp_M* 1pnu_M 1pny_M 1vor_P 1vou_P 1vow_P 1voy_P 1vp0_P
Probab=93.31 E-value=0.042 Score=42.46 Aligned_cols=87 Identities=16% Similarity=0.207 Sum_probs=57.0
Q ss_pred eeEEEEEccCCCeEEEEEcCCCCeEEEEeeccCcccCCCCCCCHHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCCccC
Q 039298 60 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKT 139 (197)
Q Consensus 60 ~gi~hI~ss~NNTiitlTD~~G~~~~~~SsG~~g~k~~rrkst~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~~KG 139 (197)
..-+-|+-|.++++..|.|..|..+++..+... + ++ ...--||+.+++.++++|++.||+.+..-. ||.+.
T Consensus 26 rpRL~V~rSnkhIyAQiidd~~~~tl~sAST~e-l-~~--~~n~~AA~~vG~llA~Ral~~GI~~vvfDr---gg~~y-- 96 (114)
T 2zjr_L 26 RLRLSVYRSSKHIYAQIIDDSRGQTLAAASSAA-L-KS--GNKTDTAAAVGKALAAAAAEKGIKQVVFDR---GSYKY-- 96 (114)
T ss_dssp SEEECCCTTSSCCCCCEEETTTTEECCCCCSCS-C-CT--TCSSSSHHHHHHHHHHHHHTTCCCCCEECC---CSSCS--
T ss_pred CCEEEEEEeCCeEEEEEEEcCCCEEEEEEEchH-h-cC--CCCHHHHHHHHHHHHHHHHHCCCCEEEEec---CCccc--
Confidence 346778899999999999888776654433332 3 21 233457888999999999999999765432 33332
Q ss_pred CCCCh-HHHHHHHHhCCcE
Q 039298 140 PGPGA-QSALRALARSGMK 157 (197)
Q Consensus 140 ~G~Gr-~~alraL~~~Glk 157 (197)
=|| +++.+++...|++
T Consensus 97 --hgrV~Ala~~are~GL~ 113 (114)
T 2zjr_L 97 --HGRVKALADAAREGGLD 113 (114)
T ss_dssp --CSHHHHHHHHHHHHC--
T ss_pred --cHHHHHHHHHHHHhCCc
Confidence 233 4466777777775
No 13
>3bbo_Q Ribosomal protein L18; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=92.89 E-value=0.087 Score=42.99 Aligned_cols=91 Identities=19% Similarity=0.216 Sum_probs=59.6
Q ss_pred eeEEEEEccCCCeEEEEEcCCCC-eEEEEeeccCcccCCC---CCCCHHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCC
Q 039298 60 FGVAHIFASFNDTFIHVTDLSGR-ETLVRITGGMKVKADR---DESSPYAAMLAAQDVSTRCKELGITALHIKLRATGGN 135 (197)
Q Consensus 60 ~gi~hI~ss~NNTiitlTD~~G~-~~~~~SsG~~g~k~~r---rkst~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~ 135 (197)
...+-|+-|.+++...|.|..+. ++.+.|+=-..+++.- ....--||..+++.++++|++.||+.+..- .||.
T Consensus 65 rPRL~V~rSnkhIyAQvIdd~~g~tLasASTlek~lk~~l~~g~~~n~~AA~~VG~liAeRA~e~GI~~VvFD---Rgg~ 141 (161)
T 3bbo_Q 65 RPRLCVFRSNKHLYVQVIDDSKMHTLASASTMQKSISEELDYSSSPTIEVAKKVGEVIASACLEKGITKVAFD---RGGY 141 (161)
T ss_dssp CCCCEEEECSSCEEEEEECCTTSCEEEEEEHHHHHHHHCCTTCCSSSHHHHHHHHHHSSSHHHHTSSCCCCCC---CSSS
T ss_pred CCEEEEEecCCeEEEEEEECCCCEEEEEEeCCcHHHHhhccccCCCCHHHHHHHHHHHHHHHHHCCCCEEEEe---CCCC
Confidence 45678899999999998876655 5555555222233211 145677899999999999999999986433 2332
Q ss_pred CccCCCCCh-HHHHHHHHhCCcE
Q 039298 136 KTKTPGPGA-QSALRALARSGMK 157 (197)
Q Consensus 136 ~~KG~G~Gr-~~alraL~~~Glk 157 (197)
.- + || +++..++...||+
T Consensus 142 ~Y---h-GRVkAladaaRe~GL~ 160 (161)
T 3bbo_Q 142 PY---H-GRVKALADAAREKGLQ 160 (161)
T ss_dssp CS---S-STTHHHHHHHTTTTCC
T ss_pred cc---h-HHHHHHHHHHHHhCCc
Confidence 21 1 33 4556666667775
No 14
>2zkr_n 60S ribosomal protein L5; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=88.80 E-value=3.1 Score=36.85 Aligned_cols=93 Identities=17% Similarity=0.116 Sum_probs=61.4
Q ss_pred eeEEEEEccCCCeEEEEEcCC--CCeEEEEeecc-C---cccCCCCCCCHHHHHHHHHHHHHHHHHc-------------
Q 039298 60 FGVAHIFASFNDTFIHVTDLS--GRETLVRITGG-M---KVKADRDESSPYAAMLAAQDVSTRCKEL------------- 120 (197)
Q Consensus 60 ~gi~hI~ss~NNTiitlTD~~--G~~~~~~SsG~-~---g~k~~rrkst~~Aa~~aa~~v~~k~~el------------- 120 (197)
..-+-|+-|..++++.|.|.. |..+++..+.. . |++.+ ....-||+.++.-+++++.+.
T Consensus 48 kpRLvVrrSNk~I~aQII~~~~~gd~tLasAsS~El~kyg~k~g--~tN~aAAy~tGlLlArRal~k~~ld~~y~G~~e~ 125 (297)
T 2zkr_n 48 KYRMIVRVTNRDIICQIAYARIEGDMIVCARYAHELPKYGVKVG--LTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEV 125 (297)
T ss_dssp SEEEEEEEETTEEEEEEEECCSSSCEEEEEEEGGGGGGTCCCSC--SSSHHHHHHHHHHHHHHHHCCCSCCCCCSSCCSS
T ss_pred CceEEEEEecCcEEEEEEeccCCCCEEEEEeecCcccccccccC--CCcHHHHHHHHHHHHHHHHHhhccchhhcCcccc
Confidence 356677889999999999977 77666554443 2 23322 244667899999999999987
Q ss_pred --------------CccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEE
Q 039298 121 --------------GITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKI 158 (197)
Q Consensus 121 --------------Gi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI 158 (197)
|+..+.+-+ ||.++.. |--=.+++++....||+|
T Consensus 126 ~g~~~~ve~~~~~~gi~~vvfDr---Gl~rytt-ggRVfa~akGArDgGL~~ 173 (297)
T 2zkr_n 126 TGDEYNVESIDGQPGAFTCYLDA---GLARTTT-GNKVFGALKGAVDGGLSI 173 (297)
T ss_dssp SSCCCCCSSSCSSSCCCBEEEEC---TTSCCCT-TCHHHHHHHHHHHTTCBC
T ss_pred ccccccccccccCCCceEEEEec---CCcccCC-CchHHHHHHHHHhcCccc
Confidence 777665544 4443311 111245778888888764
No 15
>3u5e_D 60S ribosomal protein L5; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3u5i_D 4b6a_D 3izc_Q 3izs_Q 3o58_E 3o5h_E 3jyw_E 1s1i_E
Probab=82.84 E-value=8.4 Score=34.11 Aligned_cols=97 Identities=15% Similarity=0.135 Sum_probs=60.2
Q ss_pred eeEEEEEccCCCeEEEEEcC--CCCeEEEEeec-cCcccCC-CCCCCHHHHHHHHHHHHHHHHHc--------CccEE--
Q 039298 60 FGVAHIFASFNDTFIHVTDL--SGRETLVRITG-GMKVKAD-RDESSPYAAMLAAQDVSTRCKEL--------GITAL-- 125 (197)
Q Consensus 60 ~gi~hI~ss~NNTiitlTD~--~G~~~~~~SsG-~~g~k~~-rrkst~~Aa~~aa~~v~~k~~el--------Gi~~l-- 125 (197)
..-+-|+-|..++++.|.|. .|..+++..+. -....+- .....--||.+++..+|++|++. |+..+
T Consensus 48 kpRLvV~rSNrhIyAQIIdd~~~Gd~tLaSASS~El~k~g~k~~~~N~~AAy~vG~LiAeRAl~k~~ld~~y~G~~e~~g 127 (297)
T 3u5e_D 48 KYRLVVRFTNKDIICQIISSTITGDVVLAAAYSHELPRYGITHGLTNWAAAYATGLLIARRTLQKLGLDETYKGVEEVEG 127 (297)
T ss_dssp CCEEEEEEETTEEEEEEEECCTTCCEEEEEEEGGGGGGGTCCSCTTSHHHHHHHHHHHHHHHHHHTSTTSSCCCCSSCCC
T ss_pred CceEEEEEcCCeEEEEEeecCCCCCEEEEEEeecchhhcccCCCCCcHHHHHHHHHHHHHHHHHhhCCcccccCcccccc
Confidence 44566778889999999997 57555544433 3321110 11245678899999999999987 77641
Q ss_pred ---------------EEEEEeeCCCCccCCCCChHHHHHHHHhCCcEE
Q 039298 126 ---------------HIKLRATGGNKTKTPGPGAQSALRALARSGMKI 158 (197)
Q Consensus 126 ---------------~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI 158 (197)
...| ..|+.++ ..|--=.+|+++....||.|
T Consensus 128 ~~~~ve~~~~~~~~f~~~L-DvGl~rt-ttG~RVfaalKGA~DgGL~I 173 (297)
T 3u5e_D 128 EYELTEAVEDGPRPFKVFL-DIGLQRT-TTGARVFGALKGASDGGLYV 173 (297)
T ss_dssp CCCCCCCCSSSCCCCBCEE-ECTTCCC-CTTCSHHHHHHHHHHHTCBC
T ss_pred ceeccccccCCCCceeEEE-ecCCCcc-CccceehhhhhcccccCccc
Confidence 1333 2344443 22333467889888888753
No 16
>4a17_M RPL5, 60S ribosomal protein L5; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_M 4a1c_M 4a1e_M
Probab=78.41 E-value=9.1 Score=33.93 Aligned_cols=95 Identities=17% Similarity=0.099 Sum_probs=59.8
Q ss_pred eeEEEEEccCCCeEEEEEcC--CCCeEEEEeec-cC---cccCCCCCCCHHHHHHHHHHHHHHHHHc--------CccE-
Q 039298 60 FGVAHIFASFNDTFIHVTDL--SGRETLVRITG-GM---KVKADRDESSPYAAMLAAQDVSTRCKEL--------GITA- 124 (197)
Q Consensus 60 ~gi~hI~ss~NNTiitlTD~--~G~~~~~~SsG-~~---g~k~~rrkst~~Aa~~aa~~v~~k~~el--------Gi~~- 124 (197)
..-+-|+-|..++++.|.|. .|..+++..+. -. |.+.+ ...--||.+++..+|++|++. |+..
T Consensus 48 kpRLvV~rSNrhIyAQIIdd~~~Gd~tLaSASS~El~~~g~k~~--~~N~~AAy~vG~LiAeRAl~k~~~d~~y~G~~e~ 125 (301)
T 4a17_M 48 KYRLVARATNTRIIAQIVYATLKCDRVLCAADSYELKRFGVSTG--LASYAAAYATGLLLARRLLKQIGLDTVYAGQTKV 125 (301)
T ss_dssp CEEEEEEECSSCEEEEEEEECSSCEEEEEEEETTHHHHTTCCSC--TTSHHHHHHHHHHHHHHHHHHHTCTTTCCCCSSC
T ss_pred CceEEEEEcCCeEEEEEeecCCCCCEEEEEEeeccchhccccCC--CCcHHHHHHHHHHHHHHHHHhcCCcccccCcccc
Confidence 45666788899999999997 67555444333 22 22212 245678899999999999997 7772
Q ss_pred ----------------EEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEE
Q 039298 125 ----------------LHIKLRATGGNKTKTPGPGAQSALRALARSGMKI 158 (197)
Q Consensus 125 ----------------l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI 158 (197)
+...| ..|+.++. .|--=.+|+++....||.|
T Consensus 126 ~g~~~~ve~~~~~~~~f~~~L-D~Gl~rtt-~G~RVfaalKGA~DgGL~I 173 (301)
T 4a17_M 126 DGAYFNVDEDQKEKKPFKAIL-DAGLVRTT-TGNRVFGVLKGACDGGINI 173 (301)
T ss_dssp CCSCCCGGGTCCSSCCCBCEE-ECTTSCCC-SSCHHHHHHHHHHHTTCBC
T ss_pred ccceeecccccCCCCceEEEE-ecCCcccC-cccchhhhhhcccccCccc
Confidence 12333 22444331 1222356889888888753
No 17
>3iz5_Q 60S ribosomal protein L5 (L18P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_Q
Probab=63.68 E-value=18 Score=32.05 Aligned_cols=88 Identities=16% Similarity=0.123 Sum_probs=53.2
Q ss_pred cCCCeEEEEEcC--CCCeEEE-EeeccCcccCCC-CCCCHHHHHHHHHHHHHHHHHc--------CccEE----------
Q 039298 68 SFNDTFIHVTDL--SGRETLV-RITGGMKVKADR-DESSPYAAMLAAQDVSTRCKEL--------GITAL---------- 125 (197)
Q Consensus 68 s~NNTiitlTD~--~G~~~~~-~SsG~~g~k~~r-rkst~~Aa~~aa~~v~~k~~el--------Gi~~l---------- 125 (197)
|..++++.|.|. .|..+++ .|+--+...+-. .-...-||++++.-+|++|++. |+..+
T Consensus 57 SNrhIyaQII~~~i~GD~tLaSAsS~EL~kyG~k~g~~N~aAAy~tGlLiA~RAl~k~~ld~~y~G~~e~~g~~~~ve~~ 136 (304)
T 3iz5_Q 57 TNKDITAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLTLRGLDQEYEGNVEATGEDYYVEPA 136 (304)
T ss_dssp CSSCCEEEEEEEETTEEEEEEEEETTTGGGGSCCSCTTSHHHHHHHHHHHHHHHHTTCSSCCCCCSSSCCCSCCCSSCCS
T ss_pred cCCcEEEEEEecCCCCCEEEEEEecCchhhcccCCCCCcHHHHHHHHHHHHHHHHHhhCCccccCCccccccceeccccc
Confidence 778999999886 5755444 444333322100 1234567899999999999997 77751
Q ss_pred ------EEEEEeeCCCCccCCCCChHHHHHHHHhCCcE
Q 039298 126 ------HIKLRATGGNKTKTPGPGAQSALRALARSGMK 157 (197)
Q Consensus 126 ------~V~lr~~gg~~~KG~G~Gr~~alraL~~~Glk 157 (197)
.+.| ..|+.++. .|--=.+|+++....||.
T Consensus 137 ~~~~~f~~~L-DiGL~rtt-tG~RVfaalKGA~DgGL~ 172 (304)
T 3iz5_Q 137 DERRPFRALL-DVGLIRTT-TGNRVFGALKGALDGGLD 172 (304)
T ss_dssp SCSCCCSCEE-ECTTCCCC-SSCHHHHHHHHHHTTTCC
T ss_pred CCCCCceEEE-ecCCcccc-cCceeEEeeccccccCcc
Confidence 1333 22444432 222235688888878765
No 18
>4e0a_A BH1408 protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG, transferase; 1.80A {Bacillus halodurans} PDB: 4f6a_A*
Probab=56.98 E-value=38 Score=23.27 Aligned_cols=47 Identities=11% Similarity=0.091 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEEE
Q 039298 103 PYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 161 (197)
Q Consensus 103 ~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~I 161 (197)
-++.++ .+.+.+.+.+.|+..+.+.+ -..-..+++...+.|++....
T Consensus 104 Gig~~l-l~~~~~~~~~~g~~~i~l~~-----------~~~n~~a~~~y~k~GF~~~~~ 150 (164)
T 4e0a_A 104 GIGRLI-FEAIISYGKAHQVDAIELDV-----------YDFNDRAKAFYHSLGMRCQKQ 150 (164)
T ss_dssp SHHHHH-HHHHHHHHHHTTCSEEEEEE-----------ETTCHHHHHHHHHTTCEEEEE
T ss_pred ChHHHH-HHHHHHHHHHcCCCEEEEEE-----------EcCCHHHHHHHHHcCCEEece
Confidence 455544 35577888889999999988 244567889999999998765
No 19
>3eo4_A Uncharacterized protein MJ1062; APC60792.2,MJ_1062,methanocaldococcus jannaschii DSM 2661, S genomics, PSI-2; HET: MES PG6; 2.19A {Methanocaldococcus jannaschii}
Probab=50.62 E-value=58 Score=22.84 Aligned_cols=49 Identities=12% Similarity=0.130 Sum_probs=36.7
Q ss_pred CCHHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEEE
Q 039298 101 SSPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 161 (197)
Q Consensus 101 st~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~I 161 (197)
+.-|+..+ .+.+.+.++++|+..|.+.+ -+.-..+++.+.+.|++....
T Consensus 104 g~Gig~~l-l~~~~~~a~~~g~~~i~l~v-----------~~~N~~a~~~y~k~GF~~~g~ 152 (164)
T 3eo4_A 104 GKHIGRHS-VSLVLKWLKNIGYKKAHARI-----------LENNIRSIKLFESLGFKKTKK 152 (164)
T ss_dssp TSSHHHHH-HHHHHHHHHHTTCCEEEEEE-----------ETTCHHHHHHHHHTTCEEEEE
T ss_pred CccHHHHH-HHHHHHHHHhCCCcEEEEEe-----------CCCCHHHHHHHHHCCCEEEee
Confidence 33455553 45567777899999999998 345567999999999998765
No 20
>2j8m_A Acetyltransferase PA4866 from P. aeruginosa; GCN5 family, phosphinothricin, methionine sulfone, methionine sulfoximine; 1.44A {Pseudomonas aeruginosa} PDB: 2bl1_A 2j8n_A 2j8r_A* 1yvo_A
Probab=44.34 E-value=80 Score=22.51 Aligned_cols=48 Identities=15% Similarity=0.264 Sum_probs=34.7
Q ss_pred CCHHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEE
Q 039298 101 SSPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGR 160 (197)
Q Consensus 101 st~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~ 160 (197)
+.-++.+ +.+.+.+.|+++|+..|.+.+ -..-..+++...+.|++...
T Consensus 96 g~Gig~~-ll~~~~~~a~~~g~~~i~l~v-----------~~~N~~a~~~y~k~GF~~~g 143 (172)
T 2j8m_A 96 GKGLGVQ-LLQALIERARAQGLHVMVAAI-----------ESGNAASIGLHRRLGFEISG 143 (172)
T ss_dssp TSSHHHH-HHHHHHHHHHHTTCCEEEEEE-----------ETTCHHHHHHHHHTTCEEEE
T ss_pred CCCHHHH-HHHHHHHHHHHCCccEEEEEE-----------cCCCHHHHHHHHHCCCEEEe
Confidence 3345554 445577778889999999888 23456788889999998754
No 21
>2jlm_A Putative phosphinothricin N-acetyltransferase; methionine sulfoximine; 2.35A {Acinetobacter baylyi}
Probab=44.05 E-value=77 Score=23.21 Aligned_cols=46 Identities=7% Similarity=0.056 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEE
Q 039298 103 PYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGR 160 (197)
Q Consensus 103 ~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~ 160 (197)
-||.. +.+.+.+.|+++|+..|.+.+ -..-..|++.+.+.|++...
T Consensus 106 Gig~~-ll~~~~~~a~~~g~~~i~l~v-----------~~~N~~a~~~yek~GF~~~g 151 (182)
T 2jlm_A 106 GLSKH-LMNELIKRAVESEVHVMVGCI-----------DATNVASIQLHQKLGFIHSG 151 (182)
T ss_dssp SHHHH-HHHHHHHHHHHTTCCEEEEEE-----------ETTCHHHHHHHHHTTCEEEE
T ss_pred CHHHH-HHHHHHHHHHHCCceEEEEEE-----------eCCCHHHHHHHHHCCCcEEE
Confidence 45544 345577778889999999988 24456799999999998654
No 22
>3g8w_A Lactococcal prophage PS3 protein 05; APC61042, acetyltransferase, staphylococcus epidermidis ATCC structural genomics; HET: NHE FLC; 2.70A {Staphylococcus epidermidis atcc 12228}
Probab=42.60 E-value=83 Score=21.87 Aligned_cols=47 Identities=19% Similarity=0.129 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEEE
Q 039298 103 PYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 161 (197)
Q Consensus 103 ~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~I 161 (197)
-++..+. +.+.+.|++.|+..|.+.+ -..-..+++...+.|++....
T Consensus 97 Gig~~ll-~~~~~~a~~~g~~~i~l~v-----------~~~N~~a~~~y~k~GF~~~g~ 143 (169)
T 3g8w_A 97 IVNRELI-NHIIQYAKEQNIETLMIAI-----------ASNNISAKVFFSSIGFENLAF 143 (169)
T ss_dssp HHHHHHH-HHHHHHHHHTTCCEEEEEE-----------ETTCHHHHHHHHTTTCEEEEE
T ss_pred cHHHHHH-HHHHHHHHHCCCCEEEEEE-----------ecCCHHHHHHHHHcCCEEeee
Confidence 5555544 5577788899999999888 234457889999999987654
No 23
>3pzj_A Probable acetyltransferases; MCSG, PSI-2, structural genomics, protein structure initiati midwest center for structural genomics; HET: MSE; 1.85A {Chromobacterium violaceum}
Probab=40.73 E-value=70 Score=23.86 Aligned_cols=50 Identities=14% Similarity=0.083 Sum_probs=36.9
Q ss_pred CCCHHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEEE
Q 039298 100 ESSPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 161 (197)
Q Consensus 100 kst~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~I 161 (197)
.+--|+..+ .+.+.+.|.++|+..|.+.+ -..-..+++.+.+.|++...+
T Consensus 132 ~g~Gig~~l-l~~l~~~a~~~g~~~i~l~v-----------~~~N~~a~~~y~k~GF~~~g~ 181 (209)
T 3pzj_A 132 RRTRLATEA-VFLLLKTAFELGYRRCEWRC-----------DSRNAASAAAARRFGFQFEGT 181 (209)
T ss_dssp TTSHHHHHH-HHHHHHHHHHTTCSEEEEEE-----------ETTCHHHHHHHHHHTCEEEEE
T ss_pred hcCCHHHHH-HHHHHHHHHHcCCcEEEEee-----------cCCCHHHHHHHHHCCCEEeee
Confidence 344666554 45577777789999999998 345567999999999986544
No 24
>3d8p_A Acetyltransferase of GNAT family; NP_373092.1, structural GE joint center for structural genomics, JCSG, protein structu initiative; 2.20A {Staphylococcus aureus subsp}
Probab=40.35 E-value=86 Score=21.40 Aligned_cols=47 Identities=19% Similarity=0.142 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEEE
Q 039298 103 PYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 161 (197)
Q Consensus 103 ~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~I 161 (197)
-++.++. +.+.+.+++.|+..+.+.+ ...-..+++.+.+.|++....
T Consensus 94 Gig~~ll-~~~~~~a~~~g~~~i~l~~-----------~~~n~~a~~~y~k~GF~~~~~ 140 (163)
T 3d8p_A 94 KIGKKLL-DKVIMTCKEQNIDGIYLGT-----------IDKFISAQYFYSNNGFREIKR 140 (163)
T ss_dssp THHHHHH-HHHHHHHHHTTCCEEEEEE-----------CTTCHHHHHHHHHTTCEEECG
T ss_pred CHHHHHH-HHHHHHHHHCCCeEEEEEe-----------cCCCHHHHHHHHHCCCEEeee
Confidence 4555544 4577788889999999988 344567889999999998764
No 25
>3f8k_A Protein acetyltransferase; GCN5-related N-acetyltransferase; HET: COA; 1.84A {Sulfolobus solfataricus P2}
Probab=40.10 E-value=89 Score=21.49 Aligned_cols=47 Identities=11% Similarity=0.198 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEEE
Q 039298 103 PYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 161 (197)
Q Consensus 103 ~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~I 161 (197)
-++.+ +.+.+.+.+++.|+..+.+.+ ...-..+++...+.|++....
T Consensus 89 Gig~~-ll~~~~~~~~~~g~~~i~l~~-----------~~~N~~a~~~y~k~GF~~~~~ 135 (160)
T 3f8k_A 89 GIGTL-LVKTLIEEAKKSGLSTVKFYT-----------LPENTPMIKIGRKLGFKMRFY 135 (160)
T ss_dssp SHHHH-HHHHHHHHHHHTTCSEEEEEE-----------CTTCHHHHHHHHHHTCEEEEC
T ss_pred CHHHH-HHHHHHHHHHHcCceEEEEEE-----------cccCHHHHHHHHHcCCEEEee
Confidence 45544 345577788889999999988 345567889999999998754
No 26
>2ae6_A Acetyltransferase, GNAT family; GCN5-related N-acetyltransferase (GNAT), alpha-beta, structu genomics, PSI, protein structure initiative; HET: GOL; 2.19A {Enterococcus faecalis} SCOP: d.108.1.1
Probab=39.23 E-value=99 Score=21.99 Aligned_cols=48 Identities=17% Similarity=0.186 Sum_probs=35.3
Q ss_pred CHHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEEE
Q 039298 102 SPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 161 (197)
Q Consensus 102 t~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~I 161 (197)
.-++.++. +.+.+.|.++|+..|.+.+ ...-+.|++...+.|++....
T Consensus 96 ~GiG~~ll-~~~~~~a~~~g~~~i~l~v-----------~~~N~~A~~~Yek~GF~~~~~ 143 (166)
T 2ae6_A 96 QGIGGSLL-SYIKDMAEISGIHKLSLRV-----------MATNQEAIRFYEKHGFVQEAH 143 (166)
T ss_dssp SSHHHHHH-HHHHHHHHHHTCCEEEEEE-----------ETTCHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHHH-HHHHHHHHHCCCCEEEEEe-----------ecCCHHHHHHHHHcCCEEeeE
Confidence 34555544 4477788889999999998 244567999999999987544
No 27
>1vhs_A Similar to phosphinothricin acetyltransferase; structural genomics, unknown function; 1.80A {Bacillus subtilis} SCOP: d.108.1.1
Probab=39.10 E-value=63 Score=23.44 Aligned_cols=47 Identities=17% Similarity=0.196 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEEE
Q 039298 103 PYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 161 (197)
Q Consensus 103 ~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~I 161 (197)
-|+..+ .+.+.+.|.++|+..|.+.+ -..-..|++...+.|++....
T Consensus 97 GiG~~l-l~~~~~~a~~~g~~~i~l~v-----------~~~N~~A~~~yek~GF~~~g~ 143 (175)
T 1vhs_A 97 GVGSYL-LQEALRIAPNLGIRSLMAFI-----------FGHNKPSLKLFEKHGFAEWGL 143 (175)
T ss_dssp SHHHHH-HHHHHHHGGGGTCSEEEEEE-----------ETTCHHHHHHHHHTTCEEEEE
T ss_pred CHHHHH-HHHHHHHHHhCCceEEEEEE-----------ecCCHHHHHHHHHCCCEEEeE
Confidence 455443 34566777889999999988 244567899999999986543
No 28
>2ge3_A Probable acetyltransferase; structural GEN PSI, protein structure initiative, midwest center for struc genomics, MCSG; HET: ACO; 2.25A {Agrobacterium tumefaciens} SCOP: d.108.1.1
Probab=38.70 E-value=81 Score=22.26 Aligned_cols=47 Identities=13% Similarity=0.204 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEEE
Q 039298 103 PYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 161 (197)
Q Consensus 103 ~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~I 161 (197)
-++..+ .+.+.+.|.++|+..|.+.+ -+.-..+++...+.|++....
T Consensus 101 Gig~~l-l~~~~~~a~~~g~~~i~l~v-----------~~~N~~a~~~y~k~GF~~~~~ 147 (170)
T 2ge3_A 101 GLGARL-MRRTLDAAHEFGLHRIELSV-----------HADNARAIALYEKIGFAHEGR 147 (170)
T ss_dssp SHHHHH-HHHHHHHHHHHTCCEEEEEE-----------ETTCHHHHHHHHHHTCEEEEE
T ss_pred CHHHHH-HHHHHHHHHHCCceEEEEEE-----------EcCCHHHHHHHHHCCCEEEeE
Confidence 455554 35577778889999999998 234567889999999987544
No 29
>2i79_A Acetyltransferase, GNAT family; acetyl coenzyme *A, structur genomics, PSI-2, protein structure initiative; HET: ACO; 2.10A {Streptococcus pneumoniae}
Probab=38.69 E-value=1e+02 Score=21.87 Aligned_cols=47 Identities=13% Similarity=0.244 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHHHcC-ccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEEE
Q 039298 103 PYAAMLAAQDVSTRCKELG-ITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 161 (197)
Q Consensus 103 ~~Aa~~aa~~v~~k~~elG-i~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~I 161 (197)
-|+.. +.+.+.+.|.+.| +..|.+.+ -..-..|++...+.|++...+
T Consensus 102 Gig~~-ll~~~~~~a~~~~~~~~i~l~v-----------~~~N~~A~~~yek~GF~~~g~ 149 (172)
T 2i79_A 102 GLGSL-LLEEAIEWAQASGILRRLQLTV-----------QTRNQAAVHLYQKHGFVIEGS 149 (172)
T ss_dssp SHHHH-HHHHHHHHHHHTSSCCEEEEEE-----------ETTCHHHHHHHHHTTCEEEEE
T ss_pred CHHHH-HHHHHHHHHHhcCCeEEEEEEE-----------ECCCHHHHHHHHHCCCEEEeE
Confidence 45544 4455777888888 99999998 344567999999999987654
No 30
>1s3z_A Aminoglycoside 6'-N-acetyltransferase; GNAT, aminoglycoside ribostamycin; HET: COA RIO; 2.00A {Salmonella enteritidis} SCOP: d.108.1.1 PDB: 1s5k_A* 1s60_A* 2vbq_A*
Probab=38.43 E-value=99 Score=21.53 Aligned_cols=47 Identities=13% Similarity=0.078 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEEE
Q 039298 103 PYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 161 (197)
Q Consensus 103 ~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~I 161 (197)
-++..+ .+.+.+.+++.|+..+.+.+ ...-..+++.+.+.|++....
T Consensus 111 Gig~~l-l~~~~~~~~~~g~~~i~l~~-----------~~~N~~a~~~y~k~GF~~~~~ 157 (165)
T 1s3z_A 111 GVAKQL-IAAVQRWGTNKGCREMASDT-----------SPENTISQKVHQALGFEETER 157 (165)
T ss_dssp SHHHHH-HHHHHHHHHHTTCSEEEEEE-----------CTTCHHHHHHHHHTTCEEEEE
T ss_pred cHHHHH-HHHHHHHHHHCCCCEEEEec-----------CcCCHHHHHHHHHcCCeEeee
Confidence 355443 34577788889999999888 344567888899999987653
No 31
>3igr_A Ribosomal-protein-S5-alanine N-acetyltransferase; fisch MCSG, structural genomics, midwest center for structural GE protein structure initiative; HET: MSE; 2.00A {Vibrio fischeri} SCOP: d.108.1.0
Probab=38.39 E-value=1e+02 Score=21.67 Aligned_cols=48 Identities=10% Similarity=0.012 Sum_probs=35.3
Q ss_pred CHHHHHHHHHHHHHHH-HHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEEE
Q 039298 102 SPYAAMLAAQDVSTRC-KELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 161 (197)
Q Consensus 102 t~~Aa~~aa~~v~~k~-~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~I 161 (197)
.-|+..+. +.+.+.+ +++|+..|.+.+ -+.-..+++.+.+.|++....
T Consensus 110 ~Gig~~ll-~~~~~~a~~~~g~~~i~~~v-----------~~~N~~a~~~y~k~GF~~~g~ 158 (184)
T 3igr_A 110 KGIMRRAV-NVTIDWMFKAQNLHRIMAAY-----------IPRNEKSAKVLAALGFVKEGE 158 (184)
T ss_dssp SSHHHHHH-HHHHHHHHHTSCCSEEEEEE-----------CTTCHHHHHHHHHTTCEEEEE
T ss_pred CcHHHHHH-HHHHHHHHhhCCceEEEEEe-----------cCCCHHHHHHHHHcCCEeeee
Confidence 34555544 4466677 678999999998 345568999999999987554
No 32
>2cy2_A TTHA1209, probable acetyltransferase; structural genomics, unknown function, NPPSFA; HET: ACO; 2.00A {Thermus thermophilus} SCOP: d.108.1.1 PDB: 1wk4_A*
Probab=38.28 E-value=94 Score=21.23 Aligned_cols=47 Identities=6% Similarity=-0.099 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEEE
Q 039298 103 PYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 161 (197)
Q Consensus 103 ~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~I 161 (197)
-++..+. +.+.+.+.+.|+..+.+.+ -..-..+++.+.+.|++....
T Consensus 104 Gig~~ll-~~~~~~~~~~g~~~i~l~~-----------~~~n~~a~~~y~k~Gf~~~~~ 150 (174)
T 2cy2_A 104 GLGRALF-HEGARLLQAEGYGRMLVWV-----------LKENPKGRGFYEHLGGVLLGE 150 (174)
T ss_dssp SHHHHHH-HHHHHHHHHTTCCEEEEEE-----------ETTCHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHH-HHHHHHHHhCCCceEEEEE-----------ECCChhHHHHHHHcCCeeece
Confidence 4554443 4466778889999999888 233457889999999987653
No 33
>1on0_A YYCN protein; structural genomics, alpha-beta protein with anti-parallel B strands, PSI, protein structure initiative; 2.20A {Bacillus subtilis} SCOP: d.108.1.1
Probab=36.51 E-value=50 Score=23.57 Aligned_cols=46 Identities=17% Similarity=0.285 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEE
Q 039298 103 PYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGR 160 (197)
Q Consensus 103 ~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~ 160 (197)
-|+.++ .+.+.+.|+++|+..|.+.+ ...-..|++...+.|++...
T Consensus 104 G~g~~l-l~~~~~~a~~~g~~~i~l~v-----------~~~N~~a~~~Y~k~GF~~~g 149 (158)
T 1on0_A 104 GYAKQA-LAALDQAARSMGIRKLSLHV-----------FAHNQTARKLYEQTGFQETD 149 (158)
T ss_dssp SHHHHH-HHHHHHHHHHHTCCEEEECC-----------CTTCHHHHHHHHHTTCCCCC
T ss_pred CHHHHH-HHHHHHHHHHCCCCEEEEEE-----------ecCCHHHHHHHHHCCCEEEe
Confidence 455543 34577778889999988888 34566799999999987543
No 34
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=35.95 E-value=40 Score=30.67 Aligned_cols=57 Identities=18% Similarity=0.312 Sum_probs=41.6
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEEE
Q 039298 96 ADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 161 (197)
Q Consensus 96 ~~rrkst~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~I 161 (197)
.++...|-|....+++.+++.. ...+....|.| .|+|---..+.+.|.+.|.+|+.|
T Consensus 191 ~~r~~aTg~Gv~~~~~~~~~~~-g~~l~gk~vaV--------qG~GnVG~~~a~~L~~~GakVVav 247 (419)
T 3aoe_E 191 EGRDDAAGLGALLVLEALAKRR-GLDLRGARVVV--------QGLGQVGAAVALHAERLGMRVVAV 247 (419)
T ss_dssp SSCSCHHHHHHHHHHHHHHHHH-TCCCTTCEEEE--------ECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCccchHHHHHHHHHHHHHhc-CCCccCCEEEE--------ECcCHHHHHHHHHHHHCCCEEEEE
Confidence 3556778887777777666552 23455677888 778876677888899999999877
No 35
>2fe7_A Probable N-acetyltransferase; structural genomics, pseudomonas aerugi PSI, protein structure initiative; 2.00A {Pseudomonas aeruginosa ucbpp-pa14} SCOP: d.108.1.1
Probab=35.92 E-value=1e+02 Score=21.04 Aligned_cols=46 Identities=11% Similarity=-0.034 Sum_probs=32.5
Q ss_pred CHHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEE
Q 039298 102 SPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIG 159 (197)
Q Consensus 102 t~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~ 159 (197)
--++..+. +.+.+.+++.|+..+.+.+ -.....+++.+.+.|++..
T Consensus 103 ~Gig~~ll-~~~~~~~~~~g~~~i~l~~-----------~~~n~~a~~~y~k~Gf~~~ 148 (166)
T 2fe7_A 103 VGAGRRLL-RELAREAVANDCGRLEWSV-----------LDWNQPAIDFYRSIGALPQ 148 (166)
T ss_dssp --HHHHHH-HHHHHHHHHTTCSEEEEEE-----------ETTCHHHHHHHHHTTCEEC
T ss_pred ccHHHHHH-HHHHHHHHHCCCCEEEEEE-----------ccCCHHHHHHHHHcCCeEc
Confidence 34555544 4577788899999999888 2345678888899998763
No 36
>3fix_A N-acetyltransferase; termoplasma acidophilum, structural GEN PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 2.30A {Thermoplasma acidophilum} PDB: 3f0a_A* 3k9u_A* 3ne7_A*
Probab=35.88 E-value=1.1e+02 Score=21.88 Aligned_cols=49 Identities=12% Similarity=0.152 Sum_probs=36.5
Q ss_pred CCHHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEEE
Q 039298 101 SSPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 161 (197)
Q Consensus 101 st~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~I 161 (197)
+--++..+. +.+.+.|++.|++.+.+.+ ...-..+++...+.|++....
T Consensus 124 g~Gig~~Ll-~~~~~~a~~~g~~~i~l~v-----------~~~n~~a~~~y~k~GF~~~~~ 172 (183)
T 3fix_A 124 HKKIGKTLL-LEAEKIMKKKGILECRLYV-----------HRQNSVGFSFYYKNGFKVEDT 172 (183)
T ss_dssp CHHHHHHHH-HHHHHHHHHHTCCEEEEEE-----------ETTCHHHHHHHHHTTCEEEEE
T ss_pred CCCHHHHHH-HHHHHHHHHcCCceEEEEE-----------ecCCHHHHHHHHHcCCEEecc
Confidence 335655544 5577888889999999888 244567889999999998765
No 37
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=34.55 E-value=44 Score=30.72 Aligned_cols=57 Identities=14% Similarity=0.278 Sum_probs=42.0
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEEE
Q 039298 96 ADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 161 (197)
Q Consensus 96 ~~rrkst~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~I 161 (197)
.++...|-|....+++.+++.. ...+....|.| .|+|-=...+.+.|.+.|.+|+.|
T Consensus 208 ~~r~~aTg~Gv~~~~~~~~~~~-g~~l~g~~vaV--------qGfGnVG~~~a~~L~e~GakvVav 264 (440)
T 3aog_A 208 LGRRDATGRGVFITAAAAAEKI-GLQVEGARVAI--------QGFGNVGNAAARAFHDHGARVVAV 264 (440)
T ss_dssp TTCTTHHHHHHHHHHHHHHHHH-TCCSTTCEEEE--------ECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCcchHHHHHHHHHHHHHhc-CCCccCCEEEE--------eccCHHHHHHHHHHHHCCCEEEEE
Confidence 4566778888777777666552 23455778888 788876667788899999999977
No 38
>1mk4_A Hypothetical protein YQJY; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: d.108.1.1
Probab=34.51 E-value=1.1e+02 Score=20.86 Aligned_cols=48 Identities=15% Similarity=0.162 Sum_probs=35.6
Q ss_pred CCHHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEE
Q 039298 101 SSPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGR 160 (197)
Q Consensus 101 st~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~ 160 (197)
+.-++..+. +.+.+.+++.|+..+.+.+ -+.-..+++.+.+.|++...
T Consensus 82 g~Gig~~ll-~~~~~~~~~~g~~~i~~~~-----------~~~N~~a~~~y~k~Gf~~~~ 129 (157)
T 1mk4_A 82 KMQIGKQLY-DVFIETVKQRGCTRVKCVT-----------SPVNKVSIAYHTKLGFDIEK 129 (157)
T ss_dssp HHHHHHHHH-HHHHHHHHTTTCCEEEEEE-----------CTTCHHHHHHHHHTTCEECC
T ss_pred CCCHHHHHH-HHHHHHHHHCCCcEEEEEE-----------cCCCHHHHHHHHHcCCEEcC
Confidence 445665544 4477778889999999888 34456788889999998765
No 39
>1yr0_A AGR_C_1654P, phosphinothricin acetyltransferase; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.00A {Agrobacterium tumefaciens str} SCOP: d.108.1.1
Probab=34.13 E-value=1.2e+02 Score=21.68 Aligned_cols=48 Identities=10% Similarity=0.120 Sum_probs=34.5
Q ss_pred CCHHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEE
Q 039298 101 SSPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGR 160 (197)
Q Consensus 101 st~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~ 160 (197)
+.-++..+ .+.+.+.|++.|+..|.+.+ -..-..+++...+.|++...
T Consensus 97 g~Gig~~l-l~~~~~~a~~~g~~~i~l~v-----------~~~N~~a~~~y~k~GF~~~g 144 (175)
T 1yr0_A 97 GHGIGKRL-MQALIDHAGGNDVHVLIAAI-----------EAENTASIRLHESLGFRVVG 144 (175)
T ss_dssp TSSHHHHH-HHHHHHHHHTTTCCEEEEEE-----------ETTCHHHHHHHHHTTCEEEE
T ss_pred CCCHHHHH-HHHHHHHHHhCCccEEEEEe-----------cCCCHHHHHHHHHCCCEEEE
Confidence 44455543 45577778889999999888 23456788999999998644
No 40
>2i6c_A Putative acetyltransferase; GNAT family, structural genomic, structur genomics, PSI-2, protein structure initiative; HET: MSE EPE; 1.30A {Pseudomonas aeruginosa} SCOP: d.108.1.1 PDB: 3pgp_A*
Probab=33.14 E-value=1.1e+02 Score=20.68 Aligned_cols=48 Identities=15% Similarity=0.068 Sum_probs=35.1
Q ss_pred CHHHHHHHHHHHHHHHHH-cCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEEE
Q 039298 102 SPYAAMLAAQDVSTRCKE-LGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 161 (197)
Q Consensus 102 t~~Aa~~aa~~v~~k~~e-lGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~I 161 (197)
.-++..+. +.+.+.+++ +|++.+.+.+ ...-..+++.+.+.|++....
T Consensus 90 ~Gig~~l~-~~~~~~~~~~~g~~~i~l~~-----------~~~n~~a~~~y~k~Gf~~~~~ 138 (160)
T 2i6c_A 90 LGVARYLI-GVMENLAREQYKARLMKISC-----------FNANAAGLLLYTQLGYQPRAI 138 (160)
T ss_dssp TTHHHHHH-HHHHHHHHHHHCCSEEEEEE-----------ETTCHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHHH-HHHHHHHHhhCCccEEEEEE-----------ecCCHHHHHHHHHcCCEEccc
Confidence 34555544 557777888 8999999988 234567889999999987764
No 41
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=32.58 E-value=35 Score=31.20 Aligned_cols=57 Identities=11% Similarity=0.201 Sum_probs=42.1
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEEE
Q 039298 96 ADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 161 (197)
Q Consensus 96 ~~rrkst~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~I 161 (197)
.++...|-|....+++.+++.. ...+....|.| .|+|.=-..+.+.|.+.|.+|+.|
T Consensus 194 ~~r~~aTg~Gv~~~~~~~~~~~-g~~l~g~~vaV--------qG~GnVG~~aa~~l~e~GakVVav 250 (424)
T 3k92_A 194 QGRETATAQGVTICIEEAVKKK-GIKLQNARIII--------QGFGNAGSFLAKFMHDAGAKVIGI 250 (424)
T ss_dssp TTTTTHHHHHHHHHHHHHHHHT-TCCGGGCEEEE--------ECCSHHHHHHHHHHHHHTCEEEEE
T ss_pred CCCcccHHHHHHHHHHHHHHHc-CCCcccCEEEE--------ECCCHHHHHHHHHHHHCCCEEEEE
Confidence 3566778887777777666543 34566778899 788876667778888889999877
No 42
>3pp9_A Putative streptothricin acetyltransferase; toxin production resistance, infectious diseases, structural genomics; HET: MSE ACO; 1.60A {Bacillus anthracis}
Probab=32.48 E-value=1.4e+02 Score=21.35 Aligned_cols=47 Identities=15% Similarity=0.199 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEEE
Q 039298 103 PYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 161 (197)
Q Consensus 103 ~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~I 161 (197)
-++..+ .+.+.+.++++|+..+.+.+ ...-..+++...+.|++....
T Consensus 116 Gig~~l-l~~~~~~~~~~g~~~i~~~~-----------~~~N~~a~~~y~k~Gf~~~~~ 162 (187)
T 3pp9_A 116 GVGKRL-IAQAKQWAKEGNMPGIMLET-----------QNNNVAACKFYEKCGFVIGGF 162 (187)
T ss_dssp SHHHHH-HHHHHHHHHHTTCCEEEEEE-----------ETTCHHHHHHHHHTTCEEEEE
T ss_pred CHHHHH-HHHHHHHHHHCCCCEEEEEE-----------ecCCHHHHHHHHHCCCEEece
Confidence 455544 45577888889999999888 233467889999999998765
No 43
>4evy_A Aminoglycoside N(6')-acetyltransferase type 1; center for structural genomics of infectious diseases (csgid national institute of allergy and infectious diseases; HET: TOY; 1.77A {Acinetobacter haemolyticus} PDB: 4f0y_A 4e8o_A
Probab=32.04 E-value=1.3e+02 Score=21.08 Aligned_cols=47 Identities=15% Similarity=0.095 Sum_probs=34.6
Q ss_pred CHHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEE
Q 039298 102 SPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGR 160 (197)
Q Consensus 102 t~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~ 160 (197)
.-++.++. +.+.+.|++.|+..+.+.+ ...-..+++...+.|++...
T Consensus 110 ~Gig~~Ll-~~~~~~a~~~g~~~i~l~~-----------~~~N~~a~~~y~k~GF~~~~ 156 (166)
T 4evy_A 110 SGVATMLI-RQAEVWAKQFSCTEFASDA-----------ALDNVISHAMHRSLGFQETE 156 (166)
T ss_dssp SSHHHHHH-HHHHHHHHHTTCCEEEEEE-----------ETTCHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHH-HHHHHHHHHcCCCEEEEec-----------CCCCHHHHHHHHHcCCEecc
Confidence 34555544 5577888999999999888 23356788889999998654
No 44
>2oh1_A Acetyltransferase, GNAT family; YP_013287.1, structural genom joint center for structural genomics, JCSG, protein structu initiative; HET: MSE UNL; 1.46A {Listeria monocytogenes str}
Probab=31.80 E-value=1.3e+02 Score=20.96 Aligned_cols=47 Identities=6% Similarity=0.064 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEEE
Q 039298 103 PYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 161 (197)
Q Consensus 103 ~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~I 161 (197)
-++..+. +.+.+.|++.|++.+.+.+ ......+++...+.|++....
T Consensus 119 Gig~~ll-~~~~~~a~~~g~~~i~l~~-----------~~~N~~a~~~y~k~GF~~~~~ 165 (179)
T 2oh1_A 119 SLSKQMI-YFAEKLGIEMSVPFIRLDC-----------IESNETLNQMYVRYGFQFSGK 165 (179)
T ss_dssp CHHHHHH-HHHHHHHHHTTCCEEEEEE-----------ETTCHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHH-HHHHHHHHHcCCCEEEEEe-----------cCCcHHHHHHHHHCCCEEecc
Confidence 4554443 4577788889999999888 244567888899999987654
No 45
>2x7b_A N-acetyltransferase SSO0209; HET: COA; 1.95A {Sulfolobus solfataricus}
Probab=31.70 E-value=1.4e+02 Score=21.27 Aligned_cols=47 Identities=11% Similarity=0.091 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHHHc-CccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEEE
Q 039298 103 PYAAMLAAQDVSTRCKEL-GITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 161 (197)
Q Consensus 103 ~~Aa~~aa~~v~~k~~el-Gi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~I 161 (197)
-++.++. +.+.+.+++. |+..|.+.+ ...-..|++...+.|++....
T Consensus 103 GiG~~Ll-~~~~~~a~~~~g~~~i~l~v-----------~~~N~~A~~~Yek~GF~~~~~ 150 (168)
T 2x7b_A 103 GIATTLL-EASMKSMKNDYNAEEIYLEV-----------RVSNYPAIALYEKLNFKKVKV 150 (168)
T ss_dssp SHHHHHH-HHHHHHHHHTTCCSEEEEEE-----------ETTCHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHH-HHHHHHHHHhcCeeEEEEEE-----------EeCCHHHHHHHHHCCCEEEEE
Confidence 4555544 5577788887 999999988 234567899999999998765
No 46
>3i9s_A Integron cassette protein; oyster POND, woods HOLE, acetyltransferase, structural genomics, PSI-2, protein structure initiative; 2.20A {Vibrio cholerae}
Probab=31.34 E-value=1.2e+02 Score=21.52 Aligned_cols=45 Identities=11% Similarity=0.007 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEE
Q 039298 103 PYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIG 159 (197)
Q Consensus 103 ~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~ 159 (197)
-++.++. +.+.+.|++.|+..|.+.+ ...-..+++...+.|++..
T Consensus 119 Gig~~ll-~~~~~~a~~~g~~~i~l~~-----------~~~N~~a~~~y~k~GF~~~ 163 (183)
T 3i9s_A 119 GIGLQLM-KHLATIAITHNCQRLDWTA-----------ESTNPTAGKFYKSIGASLI 163 (183)
T ss_dssp CHHHHHH-HHHHHHHHHTTEEEEEEEE-----------ETTCHHHHHHHHHTTCEEC
T ss_pred CHHHHHH-HHHHHHHHHcCCCEEEEEE-----------ecCChHHHHHHHHcCCcee
Confidence 4555544 5577888899999998888 2445678888999999864
No 47
>2vzy_A RV0802C; transferase, GCN5-related N-acetyltransferase, succinyltransferase; HET: FLC; 2.00A {Mycobacterium tuberculosis} PDB: 2vzz_A*
Probab=31.31 E-value=1.6e+02 Score=21.80 Aligned_cols=47 Identities=11% Similarity=0.032 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHHHH-cCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEEE
Q 039298 103 PYAAMLAAQDVSTRCKE-LGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 161 (197)
Q Consensus 103 ~~Aa~~aa~~v~~k~~e-lGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~I 161 (197)
-|+.. +.+.+.+.|.+ +|+..|.+.+ -..-..+++.+.+.|++....
T Consensus 121 Gig~~-ll~~l~~~a~~~~g~~~i~~~v-----------~~~N~~a~~~y~k~GF~~~g~ 168 (218)
T 2vzy_A 121 GYGTE-MRAAVLYFAFAELEAQVATSRS-----------FVDNPASIAVSRRNGYRDNGL 168 (218)
T ss_dssp SHHHH-HHHHHHHHHHHTSCCSEEEEEE-----------ETTCHHHHHHHHHTTCEEEEE
T ss_pred CHHHH-HHHHHHHHHHhhCCceEEEEEe-----------ccCCHHHHHHHHHCCCEEeee
Confidence 45554 33456677777 8999999998 244567899999999986554
No 48
>2q7b_A Acetyltransferase, GNAT family; NP_689019.1, structural GEN joint center for structural genomics, JCSG; HET: MSE FLC; 2.00A {Streptococcus agalactiae 2603V}
Probab=31.11 E-value=1.3e+02 Score=21.69 Aligned_cols=47 Identities=9% Similarity=-0.031 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEEE
Q 039298 103 PYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 161 (197)
Q Consensus 103 ~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~I 161 (197)
-++..+. +.+.+.+++.|+..|.+.+ ...-..+++.+.+.|++....
T Consensus 113 Gig~~ll-~~~~~~a~~~g~~~i~l~~-----------~~~N~~a~~~y~k~GF~~~~~ 159 (181)
T 2q7b_A 113 RLGRKLF-ERFMLFARASKFTRIVLDT-----------PEKEKRSHFFYENQGFKQITR 159 (181)
T ss_dssp CHHHHHH-HHHHHHHHHTTCCEEEEEE-----------ETTCHHHHHHHHTTTCEEECT
T ss_pred cHHHHHH-HHHHHHHHHCCCcEEEEEe-----------cCCCHHHHHHHHHCCCEEeee
Confidence 3555444 4577788889999999888 233457888899999987754
No 49
>3dr6_A YNCA; acetyltransferase, csgid target, essential gene, IDP00086, structural genomics, center for STRU genomics of infectious diseases; HET: MSE; 1.75A {Salmonella typhimurium} SCOP: d.108.1.1 PDB: 3dr8_A*
Probab=30.97 E-value=1.3e+02 Score=20.54 Aligned_cols=47 Identities=6% Similarity=0.089 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEEE
Q 039298 103 PYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 161 (197)
Q Consensus 103 ~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~I 161 (197)
-++.. +.+.+.+.+++.|+..+.+.+ -..-..+++.+.+.|++....
T Consensus 98 Gig~~-ll~~~~~~~~~~g~~~i~~~~-----------~~~n~~a~~~y~k~Gf~~~~~ 144 (174)
T 3dr6_A 98 GLGRK-LLSRLIDEARRCGKHVMVAGI-----------ESQNAASIRLHHSLGFTVTAQ 144 (174)
T ss_dssp SHHHH-HHHHHHHHHHHTTCSEEEEEE-----------ETTCHHHHHHHHHTTCEEEEE
T ss_pred CHHHH-HHHHHHHHHHHcCCCEEEEEe-----------ecCCHHHHHHHHhCCCEEEEE
Confidence 45554 445577778899999999888 233467889999999987654
No 50
>3i0p_A Malate dehydrogenase; araerobic parasitic protozoan, amoebic dysentery, ssgcid, NI infectious disease, structural genomics; HET: NAD; 2.60A {Entamoeba histolytica}
Probab=30.48 E-value=2.9e+02 Score=24.47 Aligned_cols=54 Identities=11% Similarity=0.025 Sum_probs=40.3
Q ss_pred CCCHHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEEE
Q 039298 100 ESSPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 161 (197)
Q Consensus 100 kst~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~I 161 (197)
---++++..|-+.++++|++.||-.|-|+= +..+|..-..+.++. +.||=-...
T Consensus 91 g~G~~~~~~am~~aiekAk~~Gig~v~vrn-------s~H~G~~g~y~~~aa-~~Gligi~~ 144 (365)
T 3i0p_A 91 GFGHVNGTIGMKMAIEKAKKYGMGMVVVRN-------STHFGIAGYYSLLAA-QEGCIGICG 144 (365)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHSEEEEEEEE-------ECCCSCHHHHHHHHH-HTTEEEEEE
T ss_pred CchHHHHHHHHHHHHHHHHHhCEEEEEEec-------CCCcchhHHHHHHHH-HCCCEEEEE
Confidence 344788899999999999999999776654 367888777777766 466654433
No 51
>2b5g_A Diamine acetyltransferase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: ALY; 1.70A {Homo sapiens} SCOP: d.108.1.1 PDB: 2b4d_A* 2jev_A* 2g3t_A 2f5i_A 2b3u_A 2b3v_A* 2b4b_A* 2b58_A* 2fxf_A* 3bj7_A* 3bj8_A*
Probab=30.36 E-value=1.2e+02 Score=20.93 Aligned_cols=45 Identities=9% Similarity=0.107 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEE
Q 039298 103 PYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIG 159 (197)
Q Consensus 103 ~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~ 159 (197)
-++..+ .+.+.+.+++.|++.|.+.+ ...-..+++.+.+.|++..
T Consensus 104 Gig~~l-l~~~~~~~~~~g~~~i~l~~-----------~~~N~~a~~~y~k~Gf~~~ 148 (171)
T 2b5g_A 104 GIGSEI-LKNLSQVAMRCRCSSMHFLV-----------AEWNEPSINFYKRRGASDL 148 (171)
T ss_dssp SHHHHH-HHHHHHHHHHHTCSEEEEEE-----------ETTCHHHHHHHHTTTCEEH
T ss_pred CHHHHH-HHHHHHHHHHCCCCEEEEEE-----------cccCHHHHHHHHHcCCEec
Confidence 455443 34566777888999999888 2344578888899998864
No 52
>2eui_A Probable acetyltransferase; dimer, structural genomics, PSI, protein structure initiative; 2.80A {Pseudomonas aeruginosa PAO1} SCOP: d.108.1.1
Probab=29.30 E-value=1.1e+02 Score=20.34 Aligned_cols=47 Identities=13% Similarity=0.135 Sum_probs=33.7
Q ss_pred CCHHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEE
Q 039298 101 SSPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIG 159 (197)
Q Consensus 101 st~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~ 159 (197)
+.-++..+. +.+.+.+++.|+..+.+.+ ...-..+++.+.+.|++..
T Consensus 92 g~Gig~~ll-~~~~~~~~~~g~~~i~~~~-----------~~~N~~a~~~y~k~Gf~~~ 138 (153)
T 2eui_A 92 RQLVADHLL-QHAKQMARETHAVRMRVST-----------SVDNEVAQKVYESIGFRED 138 (153)
T ss_dssp HHHHHHHHH-HHHHHHHHHTTEEEEEEEE-----------ETTCHHHHHHHHTTTCBCC
T ss_pred cCChHHHHH-HHHHHHHHHcCCCEEEEEE-----------ecCCHHHHHHHHHcCCEEe
Confidence 445655544 4577788889999988888 2334678888899998754
No 53
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=28.49 E-value=1.3e+02 Score=23.44 Aligned_cols=49 Identities=14% Similarity=0.169 Sum_probs=31.3
Q ss_pred HHHHHHHHHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEEE
Q 039298 111 QDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 161 (197)
Q Consensus 111 ~~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~I 161 (197)
+++.+.++++|+..|++......... -.+...+..-+.+...|+++..+
T Consensus 22 ~~~l~~~~~~G~~~vEl~~~~~~~~~--~~~~~~~~~~~~~~~~gl~~~~~ 70 (272)
T 2q02_A 22 EAFFRLVKRLEFNKVELRNDMPSGSV--TDDLNYNQVRNLAEKYGLEIVTI 70 (272)
T ss_dssp HHHHHHHHHTTCCEEEEETTSTTSST--TTTCCHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHcCCCEEEeecccccccc--ccccCHHHHHHHHHHcCCeEEec
Confidence 45667788999999998751100000 01234555667778899999887
No 54
>2g8y_A Malate/L-lactate dehydrogenases; NAD, E.coli, structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; HET: NAD 1PE; 2.15A {Escherichia coli}
Probab=28.33 E-value=3.2e+02 Score=24.41 Aligned_cols=54 Identities=17% Similarity=0.043 Sum_probs=40.4
Q ss_pred CCCHHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEEE
Q 039298 100 ESSPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 161 (197)
Q Consensus 100 kst~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~I 161 (197)
---++++..|.+.+.++|++.||-.|-|+= +..+|..-..+.++. +.||=-...
T Consensus 110 g~G~~~~~~am~~aiekAk~~Gig~v~vrn-------s~H~G~~g~y~~~aa-~~Gligi~~ 163 (385)
T 2g8y_A 110 AFGQVAAHEAMALGIEKAHQHGIAAVALHN-------SHHIGRIGYWAEQCA-AAGFVSIHF 163 (385)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHSEEEEEEEE-------EECCCCHHHHHHHHH-HTTCEEEEE
T ss_pred CcHHHHHHHHHHHHHHHHHHcCEEEEEEeC-------CCCcchHHHHHHHHH-HCCCEEEEE
Confidence 445888899999999999999998777664 367888777776666 467644433
No 55
>3owc_A Probable acetyltransferase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: COA; 1.90A {Pseudomonas aeruginosa}
Probab=28.16 E-value=1.6e+02 Score=20.67 Aligned_cols=46 Identities=9% Similarity=0.075 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHHH-cCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEEE
Q 039298 104 YAAMLAAQDVSTRCKE-LGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 161 (197)
Q Consensus 104 ~Aa~~aa~~v~~k~~e-lGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~I 161 (197)
++.. +.+.+.+.+.+ +|+..|.+.+ -..-..+++.+.+.|++....
T Consensus 110 ig~~-ll~~~~~~a~~~~g~~~i~~~~-----------~~~N~~a~~~y~k~GF~~~~~ 156 (188)
T 3owc_A 110 LGLP-MLEALLAEAFADADIERVELNV-----------YDWNAAARHLYRRAGFREEGL 156 (188)
T ss_dssp CHHH-HHHHHHHHHHHSTTCCEEEEEE-----------ETTCHHHHHHHHHTTCEEEEE
T ss_pred hhHH-HHHHHHHHHHHhhCceEEEEEE-----------ecCCHHHHHHHHHcCCEEeee
Confidence 4444 33456777778 6999999988 234567899999999987654
No 56
>2fia_A Acetyltransferase; structural genomics, PSI, protein structu initiative, midwest center for structural genomics, MCSG; 2.60A {Enterococcus faecalis} SCOP: d.108.1.1
Probab=28.08 E-value=1.4e+02 Score=20.15 Aligned_cols=47 Identities=13% Similarity=0.167 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEEE
Q 039298 103 PYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 161 (197)
Q Consensus 103 ~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~I 161 (197)
-++..+. +.+.+.+.+.|++.+.+.+ ...-..+++...+.|++....
T Consensus 91 Gig~~ll-~~~~~~~~~~g~~~i~~~~-----------~~~N~~a~~~y~k~Gf~~~~~ 137 (162)
T 2fia_A 91 GYGSLLF-HELEKRAVWEGRRKMYAQT-----------NHTNHRMIRFFESKGFTKIHE 137 (162)
T ss_dssp THHHHHH-HHHHHHHHTTTCCEEEEEE-----------ETTCHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHH-HHHHHHHHHCCCCEEEEEe-----------cCCCHHHHHHHHHCCCEEEee
Confidence 4555443 4577778889999999888 244567889999999987665
No 57
>3lod_A Putative acyl-COA N-acyltransferase; structural genomics, PSI2, MCSG, structure initiative; 2.50A {Klebsiella pneumoniae subsp}
Probab=28.03 E-value=1.5e+02 Score=20.30 Aligned_cols=49 Identities=12% Similarity=0.233 Sum_probs=35.2
Q ss_pred CCHHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEEE
Q 039298 101 SSPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 161 (197)
Q Consensus 101 st~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~I 161 (197)
+.-++.++. +.+.+.+++.|++.+.+.+ ...-..+++.+.+.|++....
T Consensus 88 g~Gig~~ll-~~~~~~~~~~g~~~i~l~~-----------~~~n~~a~~~y~~~GF~~~~~ 136 (162)
T 3lod_A 88 GQQLGEKLL-AALEAKARQRDCHTLRLET-----------GIHQHAAIALYTRNGYQTRCA 136 (162)
T ss_dssp SSSHHHHHH-HHHHHHHHTTTCCEEEEEE-----------ETTCHHHHHHHHHTTCEEECC
T ss_pred CCCHHHHHH-HHHHHHHHHCCCcEEEEEe-----------cCCCHHHHHHHHHcCCEEccc
Confidence 334555544 4577788889999999888 233466888899999987643
No 58
>1z4e_A Transcriptional regulator; nysgxrc target T2017, GNAT fold, structural genomics, PSI, P structure initiative; 2.00A {Bacillus halodurans} SCOP: d.108.1.1
Probab=27.70 E-value=1.2e+02 Score=20.90 Aligned_cols=49 Identities=20% Similarity=0.192 Sum_probs=33.7
Q ss_pred CCHHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEEE
Q 039298 101 SSPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 161 (197)
Q Consensus 101 st~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~I 161 (197)
+.-++.++. +.+.+.|++.|+..|.+.+. .....|++-..+.|++....
T Consensus 99 g~GiG~~Ll-~~~~~~a~~~g~~~i~l~v~-----------~~N~~a~~~Y~k~GF~~~~~ 147 (153)
T 1z4e_A 99 GQGIGSQLV-CWAIERAKERGCHLIQLTTD-----------KQRPDALRFYEQLGFKASHE 147 (153)
T ss_dssp TSSHHHHHH-HHHHHHHHHTTEEEEEEEEE-----------TTCTTHHHHHHHHTCEEEEE
T ss_pred CCCHHHHHH-HHHHHHHHHcCCCEEEEEEc-----------cCChHHHHHHHHcCCceece
Confidence 334555544 44777888999999888882 22335777778889987654
No 59
>1tiq_A Protease synthase and sporulation negative regulatory protein PAI 1; alpha-beta protein, structural genomics, PSI; HET: COA; 1.90A {Bacillus subtilis} SCOP: d.108.1.1
Probab=26.97 E-value=1.8e+02 Score=21.00 Aligned_cols=47 Identities=9% Similarity=0.017 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEEE
Q 039298 103 PYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 161 (197)
Q Consensus 103 ~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~I 161 (197)
-++.++. +.+.+.|++.|++.|.+.+ ....+.|++-..+.|++....
T Consensus 106 GiG~~Ll-~~~~~~a~~~g~~~i~L~v-----------~~~N~~A~~fY~k~GF~~~g~ 152 (180)
T 1tiq_A 106 GLGKHLL-NKAIEIALERNKKNIWLGV-----------WEKNENAIAFYKKMGFVQTGA 152 (180)
T ss_dssp SHHHHHH-HHHHHHHHHTTCSEEEEEE-----------ETTCHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHH-HHHHHHHHHCCCCEEEEEe-----------hhcCHHHHHHHHHcCCEEcCc
Confidence 4554443 4567778899999999888 234567888889999987654
No 60
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=26.39 E-value=1.1e+02 Score=24.90 Aligned_cols=42 Identities=17% Similarity=0.249 Sum_probs=29.5
Q ss_pred HHHHHHHHcCccEEEEEEEeeCCCCccCCCCC---------hHHHHHHHHhCCcEEEEE
Q 039298 112 DVSTRCKELGITALHIKLRATGGNKTKTPGPG---------AQSALRALARSGMKIGRI 161 (197)
Q Consensus 112 ~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~G---------r~~alraL~~~GlkI~~I 161 (197)
.+.+.++++|+..|++.+ ..+.+- .+..-+.|...|++|..+
T Consensus 39 ~~~~~a~~~G~~~vEl~~--------~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~i~~~ 89 (316)
T 3qxb_A 39 LAGLVRDDLGLEYVQYTY--------DLTDPWWPDIERDRRAIAYAKAFRKAGLTIEST 89 (316)
T ss_dssp HHHHHHHTSCCCEEEEET--------TTSCTTSCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHcCCCEEEeec--------cccCccccccchhhHHHHHHHHHHHcCCeEEEe
Confidence 345667789999999987 444432 334556667899999876
No 61
>2cnt_A Modification of 30S ribosomal subunit protein S18; N-alpha acetylation, GCN5-N-acetyltransferase, ribosomal Pro acetyltransferase, GNAT; HET: COA; 2.4A {Salmonella typhimurium} PDB: 2cnm_A* 2cns_A*
Probab=26.38 E-value=1.7e+02 Score=20.49 Aligned_cols=46 Identities=15% Similarity=0.279 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEE
Q 039298 103 PYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGR 160 (197)
Q Consensus 103 ~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~ 160 (197)
-++..+. +.+.+.+++.|+..+.+.+. ..-..+++.+.+.|++...
T Consensus 79 Gig~~ll-~~~~~~~~~~g~~~i~l~v~-----------~~N~~a~~~y~k~GF~~~~ 124 (160)
T 2cnt_A 79 GLGRMLL-EHLIDELETRGVVTLWLEVR-----------ASNAAAIALYESLGFNEAT 124 (160)
T ss_dssp SHHHHHH-HHHHHHHHHTTCCEEEEEEE-----------TTCHHHHHHHHHHTCEEEE
T ss_pred CHHHHHH-HHHHHHHHHcCCcEEEEEEe-----------cCCHHHHHHHHHCCCEEEE
Confidence 4555544 45777888899999999882 3345788888899998654
No 62
>1yre_A Hypothetical protein PA3270; APC5563, midwest center for structural genomics, MSC protein structure initiative, PSI, MCSG; HET: COA; 2.15A {Pseudomonas aeruginosa} SCOP: d.108.1.1
Probab=26.32 E-value=1.8e+02 Score=20.84 Aligned_cols=48 Identities=13% Similarity=0.148 Sum_probs=34.5
Q ss_pred CHHHHHHHHHHHHHHHHH-cCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEEE
Q 039298 102 SPYAAMLAAQDVSTRCKE-LGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 161 (197)
Q Consensus 102 t~~Aa~~aa~~v~~k~~e-lGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~I 161 (197)
.-|+..+ .+.+.+.|.+ +|+..|.+.+ -..-..+++.+.+.|++....
T Consensus 111 ~Gig~~l-l~~~~~~a~~~~g~~~i~~~v-----------~~~N~~a~~~y~k~GF~~~g~ 159 (197)
T 1yre_A 111 SGLNRMI-KYLMLKHAFDNLRMVRVQLST-----------AASNLRAQGAIDKLGAQREGV 159 (197)
T ss_dssp TTHHHHH-HHHHHHHHHHTSCCSEEEEEE-----------ETTCHHHHHHHHHHTCEEEEE
T ss_pred CCHHHHH-HHHHHHHHHhhcCccEEEEEE-----------cCCCHHHHHHHHHcCCeeeee
Confidence 3465554 3457777877 8999999988 234567888899999986544
No 63
>2dxq_A AGR_C_4057P, acetyltransferase; structural genomics, PSI-2, protein struc initiative, midwest center for structural genomics, MCSG; 1.80A {Agrobacterium tumefaciens str}
Probab=26.06 E-value=1.7e+02 Score=20.38 Aligned_cols=44 Identities=7% Similarity=0.033 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEE
Q 039298 103 PYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKI 158 (197)
Q Consensus 103 ~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI 158 (197)
-++..+. +.+.+.|+++|+..|.+.+ ....+.|++-..+.|++.
T Consensus 97 GiG~~Ll-~~~~~~a~~~g~~~i~l~v-----------~~~N~~A~~fY~k~GF~~ 140 (150)
T 2dxq_A 97 GYGRTVV-RHAIETAFGANCYKVMLLT-----------GRHDPAVHAFYESCGFVQ 140 (150)
T ss_dssp SHHHHHH-HHHHHHHHHTTCSEEEEEE-----------CCCCHHHHHHHHHTTCEE
T ss_pred CHHHHHH-HHHHHHHHHCCCCEEEEEe-----------CCCChHHHHHHHHcCCcc
Confidence 3544433 5577788889999999888 455677888889999984
No 64
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=25.47 E-value=40 Score=30.67 Aligned_cols=57 Identities=16% Similarity=0.321 Sum_probs=40.7
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEEE
Q 039298 96 ADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 161 (197)
Q Consensus 96 ~~rrkst~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~I 161 (197)
.++...|-|....+++.+++.. ...++...|.| .|+|-=...+.+.|.+.|.+|+-|
T Consensus 185 ~~r~~aTg~Gv~~~~~~~~~~~-g~~l~g~~vaV--------qG~GnVG~~~a~~L~~~GakvVav 241 (421)
T 2yfq_A 185 EGRNEATGFGVAVVVRESAKRF-GIKMEDAKIAV--------QGFGNVGTFTVKNIERQGGKVCAI 241 (421)
T ss_dssp TTCTTHHHHHHHHHHHHHHHHT-TCCGGGSCEEE--------ECCSHHHHHHHHHHHHTTCCEEEC
T ss_pred CCCCcchHHHHHHHHHHHHHhc-CCCccCCEEEE--------ECcCHHHHHHHHHHHHCCCEEEEE
Confidence 3455677777777766665542 22345677888 788876667888999999999988
No 65
>3fbu_A Acetyltransferase, GNAT family; structur genomics, PSI2, MCSG, protein structure initiative, midwest for structural genomics; HET: COA; 1.80A {Bacillus anthracis str}
Probab=25.35 E-value=1.7e+02 Score=20.17 Aligned_cols=47 Identities=19% Similarity=0.237 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHHHH-cCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEEE
Q 039298 103 PYAAMLAAQDVSTRCKE-LGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 161 (197)
Q Consensus 103 ~~Aa~~aa~~v~~k~~e-lGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~I 161 (197)
-++.. +.+.+.+.|.+ +|+..|.+.+ -+.-..+++.+.+.|++....
T Consensus 98 Gig~~-ll~~~~~~a~~~~~~~~i~l~v-----------~~~N~~a~~~y~k~GF~~~g~ 145 (168)
T 3fbu_A 98 GYASE-AAQATLKYGFKEMKLHRIIATC-----------QPENTPSYRVMEKIGMRREGY 145 (168)
T ss_dssp SHHHH-HHHHHHHHHHHTSCCSEEEEEE-----------CTTCHHHHHHHHHTTCEEEEE
T ss_pred CHHHH-HHHHHHHHHHhhCCceEEEEEe-----------ccCChHHHHHHHHCCCeEEEE
Confidence 45544 33456677766 4999999998 345567999999999987554
No 66
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=25.26 E-value=74 Score=28.93 Aligned_cols=56 Identities=14% Similarity=0.209 Sum_probs=40.6
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEEE
Q 039298 97 DRDESSPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 161 (197)
Q Consensus 97 ~rrkst~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~I 161 (197)
++...|-|.+..+++.+++.. ...+....|.| .|+|-=...+.+-|.+.|.+++-|
T Consensus 184 ~r~~aTg~Gv~~~~~~~~~~~-g~~l~gk~vaV--------qG~GnVG~~aa~~L~e~GakVVav 239 (421)
T 1v9l_A 184 VREYATGFGVAVATREMAKKL-WGGIEGKTVAI--------QGMGNVGRWTAYWLEKMGAKVIAV 239 (421)
T ss_dssp GGGGHHHHHHHHHHHHHHHHH-HSCCTTCEEEE--------ECCSHHHHHHHHHHHTTTCEEEEE
T ss_pred CcccchHHHHHHHHHHHHHhc-CCCcCCCEEEE--------ECcCHHHHHHHHHHHHCCCEEEEE
Confidence 455678787777777666653 34566677888 777764556668888899999977
No 67
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=24.98 E-value=52 Score=26.36 Aligned_cols=43 Identities=14% Similarity=0.136 Sum_probs=30.6
Q ss_pred HHHHHHHHHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEEE
Q 039298 111 QDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 161 (197)
Q Consensus 111 ~~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~I 161 (197)
+++.+.++++|+..|++.. ..+....+.+.+.+...|+++..+
T Consensus 41 ~~~l~~~~~~G~~~vEl~~--------~~~~~~~~~~~~~l~~~gl~v~~~ 83 (287)
T 3kws_A 41 NEKLDFMEKLGVVGFEPGG--------GGLAGRVNEIKQALNGRNIKVSAI 83 (287)
T ss_dssp HHHHHHHHHTTCCEEECBS--------TTCGGGHHHHHHHHTTSSCEECEE
T ss_pred HHHHHHHHHcCCCEEEecC--------CchHHHHHHHHHHHHHcCCeEEEE
Confidence 4567788899999999877 333333455556667789999776
No 68
>2r1i_A GCN5-related N-acetyltransferase; YP_831484.1, putative acetyltransferase, arthrobacter SP. FB acetyltransferase (GNAT) family; HET: MSE; 1.65A {Arthrobacter SP}
Probab=24.73 E-value=1.5e+02 Score=20.36 Aligned_cols=46 Identities=15% Similarity=0.117 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEE
Q 039298 103 PYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGR 160 (197)
Q Consensus 103 ~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~ 160 (197)
-++..+ .+.+.+.+++.|+..+.+.+ -..-..+++.+.+.|++...
T Consensus 113 Gig~~l-l~~~~~~a~~~g~~~i~~~~-----------~~~n~~a~~~y~k~Gf~~~~ 158 (172)
T 2r1i_A 113 RLGSAL-LAASCGLVRSRGGALLEINV-----------DGEDTDARRFYEARGFTNTE 158 (172)
T ss_dssp HHHHHH-HHHHHHHHHHTTCCEEEEEE-----------ETTCHHHHHHHHTTTCBSSC
T ss_pred CHHHHH-HHHHHHHHHHCCCCEEEEEE-----------cCCCHHHHHHHHHCCCEecc
Confidence 455443 34577778889999999888 23345788888889987654
No 69
>3fau_A NEDD4-binding protein 2; SMR, small-MUTS related domain, nicking endonuclease, alternative splicing, ATP-binding, coiled coil, cytoplasm, hydrolase; 1.90A {Homo sapiens} SCOP: d.68.8.1
Probab=24.34 E-value=1.7e+02 Score=19.80 Aligned_cols=67 Identities=15% Similarity=0.103 Sum_probs=38.5
Q ss_pred CHHHHHHHHHHHHHHHHH-----cCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEEEecccceecc
Q 039298 102 SPYAAMLAAQDVSTRCKE-----LGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIDLEGLLILG 170 (197)
Q Consensus 102 t~~Aa~~aa~~v~~k~~e-----lGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~I~~~~~~~~~ 170 (197)
+..-|..+.+.....+.+ .|+..+.|.- |.|-....|...=|.++.+-|.+.+++.... +.|.+.+-
T Consensus 9 ~v~eA~~~l~~~l~~~~~~~~~~~g~~~v~II~-GkG~hS~~g~~~Lk~~V~~~L~~~~~~~~e~-n~G~l~V~ 80 (82)
T 3fau_A 9 HVDEALEHLMRVLEKKTEEFKQNGGKPYLSVIT-GRGNHSQGGVARIKPAVIKYLISHSFRFSEI-KPGCLKVM 80 (82)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC-CC---------CHHHHHHHHHHHTTCCEEEE-ETTEEEEE
T ss_pred cHHHHHHHHHHHHHHHHHHhhccCCceEEEEEE-CCCCCCCCCcchHHHHHHHHHHhCCCceeeC-CCEEEEEE
Confidence 344566566666677766 8999888766 3221111122223667778888899888664 56655543
No 70
>1ufh_A YYCN protein; alpha and beta, fold, acetyltransferase, structural genomics, PSI, protein structure initiative; 2.20A {Bacillus subtilis subsp} SCOP: d.108.1.1
Probab=24.32 E-value=1.2e+02 Score=21.45 Aligned_cols=45 Identities=18% Similarity=0.293 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEE
Q 039298 103 PYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIG 159 (197)
Q Consensus 103 ~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~ 159 (197)
-++..+. +.+.+.++++|+..|.+.+ -..-..+++.+.+.|++..
T Consensus 128 Gig~~ll-~~~~~~~~~~g~~~i~l~~-----------~~~N~~a~~~y~k~GF~~~ 172 (180)
T 1ufh_A 128 GYAKQAL-AALDQAARSMGIRKLSLHV-----------FAHNQTARKLYEQTGFQET 172 (180)
T ss_dssp SHHHHHH-HHHHHHHHHTTCCEEEECC-----------CTTCHHHHHHHHHTTCCCC
T ss_pred ChHHHHH-HHHHHHHHHCCCCEEEEEe-----------ccCcHHHHHHHHHCCCEEe
Confidence 4555443 4467777889999888877 3445678888999998754
No 71
>1yvk_A Hypothetical protein BSU33890; ALPHS-beta protein, structural genomics, PSI, protein structure initiative; HET: COA; 3.01A {Bacillus subtilis subsp} SCOP: d.108.1.1
Probab=24.15 E-value=2e+02 Score=20.56 Aligned_cols=47 Identities=23% Similarity=0.414 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEEE
Q 039298 103 PYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 161 (197)
Q Consensus 103 ~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~I 161 (197)
-++.++. +.+.+.+++.|+..+.+.+ ......+++...+.|++....
T Consensus 79 Gig~~Ll-~~~~~~~~~~g~~~i~l~~-----------~~~n~~a~~~y~k~GF~~~~~ 125 (163)
T 1yvk_A 79 GFGKQLV-LDAIEKAKKLGADTIEIGT-----------GNSSIHQLSLYQKCGFRIQAI 125 (163)
T ss_dssp SHHHHHH-HHHHHHHHHTTCSEEEEEE-----------ETTCHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHH-HHHHHHHHHCCCCEEEEEc-----------CCCCHHHHHHHHHCCCEEece
Confidence 4555544 4577788889999988877 233456888889999998764
No 72
>1s7k_A Acetyl transferase; GNAT; 1.80A {Salmonella typhimurium} SCOP: d.108.1.1 PDB: 1s7l_A* 1s7n_A* 1s7f_A 1z9u_A
Probab=24.11 E-value=1.8e+02 Score=20.09 Aligned_cols=48 Identities=15% Similarity=0.047 Sum_probs=34.4
Q ss_pred CHHHHHHHHHHHHHHHHH-cCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEEE
Q 039298 102 SPYAAMLAAQDVSTRCKE-LGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 161 (197)
Q Consensus 102 t~~Aa~~aa~~v~~k~~e-lGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~I 161 (197)
.-++..+. +.+.+.+.+ .|+..|.+.+ -..-..+++.+.+.|++....
T Consensus 110 ~Gig~~ll-~~~~~~a~~~~~~~~i~~~~-----------~~~N~~a~~~y~k~Gf~~~~~ 158 (182)
T 1s7k_A 110 QGIMSQSL-QALMTHYARRGDIRRFVIKC-----------RVDNQASNAVARRNHFTLEGC 158 (182)
T ss_dssp SSHHHHHH-HHHHHHHHHHCSCCEEEEEE-----------ETTCHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHHH-HHHHHHHHhhCCccEEEEEe-----------cCCCHHHHHHHHHCCCEEEee
Confidence 34555544 446677776 8999999888 244567889999999987654
No 73
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=24.07 E-value=87 Score=29.38 Aligned_cols=60 Identities=15% Similarity=0.115 Sum_probs=44.6
Q ss_pred CCCCCCCHHHHHHHHHHHHH---HHHHcCc----cEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEEEec
Q 039298 96 ADRDESSPYAAMLAAQDVST---RCKELGI----TALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIDL 163 (197)
Q Consensus 96 ~~rrkst~~Aa~~aa~~v~~---k~~elGi----~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~I~~ 163 (197)
.++.+.|-|....+++.+.+ .++.+|+ ....|.| .|+|-=...+.+-|.+.|.+|+-|-|
T Consensus 209 ~~r~eATg~GV~~~~~~~l~~~~~~~~~G~~~~l~g~tVaV--------QG~GNVG~~aa~~L~e~GakVVavsD 275 (501)
T 3mw9_A 209 HGRISATGRGVFHGIENFINEASYMSILGMTPGFGDKTFVV--------QGFGNVGLHSMRYLHRFGAKCITVGE 275 (501)
T ss_dssp TTTTTHHHHHHHHHHHHHHTCHHHHHHTTCCSSSTTCEEEE--------ECCSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCchHHHHHHHHHHHHhhhHHHHHcCCCCCcCCCEEEE--------ECCCHHHHHHHHHHHHCCCEEEEEEc
Confidence 35667888888888776654 3445664 5678999 88887667788888889999998743
No 74
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=23.37 E-value=74 Score=29.37 Aligned_cols=58 Identities=17% Similarity=0.264 Sum_probs=43.7
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEEE
Q 039298 95 KADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 161 (197)
Q Consensus 95 k~~rrkst~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~I 161 (197)
-.++...|-|....+++.+++.. ..++....|-| .|+|-=...+.+-|...|-+++-+
T Consensus 207 s~~r~~aTg~Gv~~~~~~~~~~~-~~~l~Gk~vaV--------QG~GnVG~~aa~~L~e~GakvVav 264 (450)
T 4fcc_A 207 SLIRPEATGYGLVYFTEAMLKRH-GMGFEGMRVSV--------SGSGNVAQYAIEKAMEFGARVITA 264 (450)
T ss_dssp CTTTTTHHHHHHHHHHHHHHHHT-TCCSTTCEEEE--------ECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCCceeeeHHHHHHHHHHHc-CCCcCCCEEEE--------eCCChHHHHHHHHHHhcCCeEEEE
Confidence 34566778887777777665543 45677888999 888876677778888999999877
No 75
>2fsr_A Acetyltransferase; alpha-beta-sandwich, structural genomics, PSI, protein struc initiative, midwest center for structural genomics; HET: PEG; 1.52A {Agrobacterium tumefaciens str} SCOP: d.108.1.1
Probab=23.17 E-value=2e+02 Score=21.11 Aligned_cols=47 Identities=21% Similarity=0.225 Sum_probs=33.8
Q ss_pred CHHHHHHHHHHHHHHHHH-cCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEE
Q 039298 102 SPYAAMLAAQDVSTRCKE-LGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGR 160 (197)
Q Consensus 102 t~~Aa~~aa~~v~~k~~e-lGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~ 160 (197)
.-|+..+ .+.+.+.|.+ +|+..|.+.+ -..-..+++.+.+.|++...
T Consensus 126 ~Gig~~l-l~~~~~~a~~~~g~~~i~l~v-----------~~~N~~a~~~y~k~GF~~~g 173 (195)
T 2fsr_A 126 RGYAAEA-AVALRDWAFETLNLPTLVSYV-----------SPQNRKSAAVAERIGGTLDP 173 (195)
T ss_dssp SSHHHHH-HHHHHHHHHHHSCCSCEEEEE-----------CTTCHHHHHHHHHTTCEECT
T ss_pred CChHHHH-HHHHHHHHHhhCCccEEEEEE-----------CCCCHHHHHHHHHCCCEEEe
Confidence 3455543 3446677776 7999999988 34456789999999998653
No 76
>1qsm_A HPA2 histone acetyltransferase; protein-acetyl coenzyme A complex; HET: ACO; 2.40A {Saccharomyces cerevisiae} SCOP: d.108.1.1 PDB: 1qso_A
Probab=22.66 E-value=1e+02 Score=20.64 Aligned_cols=45 Identities=18% Similarity=0.101 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEE
Q 039298 103 PYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIG 159 (197)
Q Consensus 103 ~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~ 159 (197)
-++..+ .+.+.+.+++.|+..+.+.+ ...-..+++...+.|++..
T Consensus 99 Gig~~l-l~~~~~~~~~~g~~~i~l~~-----------~~~n~~a~~~y~k~Gf~~~ 143 (152)
T 1qsm_A 99 GAGGKL-IQFVYDEADKLGTPSVYWCT-----------DESNHRAQLLYVKVGYKAP 143 (152)
T ss_dssp SHHHHH-HHHHHHHHHHTTCCCEEEEE-----------ETTCHHHHHHHHHHEEECS
T ss_pred CHHHHH-HHHHHHHHHHcCCCeEEEEe-----------eCCCHHHHHHHHHcCCCcc
Confidence 355443 35577778889999998888 2344567888888888743
No 77
>1nsl_A Probable acetyltransferase; structural genomics, hexamer, alpha-beta, PSI, protein struc initiative, midwest center for structural genomics; 2.70A {Bacillus subtilis} SCOP: d.108.1.1
Probab=22.57 E-value=2e+02 Score=19.99 Aligned_cols=47 Identities=15% Similarity=0.118 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHH-HHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEEE
Q 039298 103 PYAAMLAAQDVSTRC-KELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 161 (197)
Q Consensus 103 ~~Aa~~aa~~v~~k~-~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~I 161 (197)
-++..+. +.+.+.+ .++|+..|.+.+ -+.-..+++.+.+.|++....
T Consensus 109 Gig~~ll-~~~~~~a~~~~g~~~i~~~~-----------~~~N~~a~~~y~k~Gf~~~~~ 156 (184)
T 1nsl_A 109 GIITAAC-RKLITYAFEELELNRVAICA-----------AVGNEKSRAVPERIGFLEEGK 156 (184)
T ss_dssp SHHHHHH-HHHHHHHHHTSCCSEEEEEE-----------ETTCHHHHHHHHHHTCEEEEE
T ss_pred CHHHHHH-HHHHHHHHHhcCcEEEEEEE-----------ecCCHHHHHHHHHcCCEEEEE
Confidence 4555544 4466677 458999999988 244567888899999986544
No 78
>2fck_A Ribosomal-protein-serine acetyltransferase, putat; ribosomal-protein structural genomics, PSI, protein structure initiative; HET: MSE; 1.70A {Vibrio cholerae o1 biovar eltor} SCOP: d.108.1.1
Probab=22.38 E-value=2e+02 Score=19.92 Aligned_cols=47 Identities=23% Similarity=0.278 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHHHH-cCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEEE
Q 039298 103 PYAAMLAAQDVSTRCKE-LGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 161 (197)
Q Consensus 103 ~~Aa~~aa~~v~~k~~e-lGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~I 161 (197)
-++.. +.+.+.+.|.+ +|+..|.+.+ -..-..+++.+.+.|++....
T Consensus 113 Gig~~-ll~~~~~~a~~~~g~~~i~~~~-----------~~~N~~a~~~y~k~GF~~~~~ 160 (181)
T 2fck_A 113 GYGKE-ALTALILFCFERLELTRLEIVC-----------DPENVPSQALALRCGANREQL 160 (181)
T ss_dssp THHHH-HHHHHHHHHHHTSCCSEEEEEE-----------CTTCHHHHHHHHHTTCEEEEE
T ss_pred ChHHH-HHHHHHHHHHHhcCceEEEEEE-----------ccCCHHHHHHHHHcCCEEEEE
Confidence 34444 33456677777 6999999888 344567899999999987554
No 79
>2r48_A Phosphotransferase system (PTS) mannose-specific iibca component; PTS system, fructose specific IIB PFAM02379, PSI-2, MCSG; 1.80A {Bacillus subtilis subsp} SCOP: c.44.2.2
Probab=22.19 E-value=87 Score=23.30 Aligned_cols=29 Identities=17% Similarity=0.445 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHHHcCccEEEEEEEeeCC
Q 039298 105 AAMLAAQDVSTRCKELGITALHIKLRATGG 134 (197)
Q Consensus 105 Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg 134 (197)
-.++||+.+-+.|+++|+. +.|..+|..|
T Consensus 17 hTymAaeaL~~aA~~~G~~-ikVEtqGs~G 45 (106)
T 2r48_A 17 HTYMAAENLQKAADRLGVS-IKVETQGGIG 45 (106)
T ss_dssp HHHHHHHHHHHHHHHHTCE-EEEEEEETTE
T ss_pred HHHHHHHHHHHHHHHCCCe-EEEEecCCCC
Confidence 3567889898999999987 8888877643
No 80
>2r4q_A Phosphotransferase system (PTS) fructose-specific iiabc component; fructose specific IIB subunit, PF structural genomics, PSI-2; HET: MSE; 1.60A {Bacillus subtilis subsp} SCOP: c.44.2.2
Probab=22.16 E-value=88 Score=23.28 Aligned_cols=28 Identities=25% Similarity=0.614 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHHcCccEEEEEEEeeCC
Q 039298 106 AMLAAQDVSTRCKELGITALHIKLRATGG 134 (197)
Q Consensus 106 a~~aa~~v~~k~~elGi~~l~V~lr~~gg 134 (197)
.++||+.+-+.|+++|+. +.|..+|..|
T Consensus 18 TymAaeaL~~aA~~~G~~-ikVEtqGs~G 45 (106)
T 2r4q_A 18 TFMAADALKEKAKELGVE-IKVETNGSSG 45 (106)
T ss_dssp HHHHHHHHHHHHHHHTCC-EEEEEEETTE
T ss_pred HHHHHHHHHHHHHHCCCe-EEEEecCCCC
Confidence 467888888889999997 8888877643
No 81
>2bei_A Diamine acetyltransferase 2; SSAT2, BC011751, AAH11751, thialysine N-acetyltransferase, structural genomics, protein structure initiative, PSI; HET: ACO; 1.84A {Homo sapiens} SCOP: d.108.1.1 PDB: 2q4v_A*
Probab=22.16 E-value=2.2e+02 Score=20.34 Aligned_cols=44 Identities=11% Similarity=0.110 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEE
Q 039298 103 PYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKI 158 (197)
Q Consensus 103 ~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI 158 (197)
-++.++. +.+.+.|++.|+..|.+.+ ....+.|++-..+.|++.
T Consensus 104 GiG~~Ll-~~~~~~a~~~g~~~i~L~v-----------~~~N~~A~~fY~k~GF~~ 147 (170)
T 2bei_A 104 GIGSKII-KKVAEVALDKGCSQFRLAV-----------LDWNQRAMDLYKALGAQD 147 (170)
T ss_dssp SHHHHHH-HHHHHHHHHTTCCEEEEEE-----------ETTCHHHHHHHHHTTCEE
T ss_pred CHHHHHH-HHHHHHHHHCCCCEEEEEE-----------eccCHHHHHHHHHCCCEe
Confidence 4555544 4577888899999999988 244567888888999875
No 82
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*
Probab=21.89 E-value=1.4e+02 Score=24.15 Aligned_cols=47 Identities=11% Similarity=0.110 Sum_probs=35.9
Q ss_pred CHHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEE
Q 039298 102 SPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGR 160 (197)
Q Consensus 102 t~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~ 160 (197)
.-|+.. +.+.+.+.|.++|+..|.+.+ -+.-..+++.+.+.|+++..
T Consensus 247 ~Gig~~-ll~~~~~~a~~~g~~~i~l~v-----------~~~N~~a~~~y~k~GF~~~~ 293 (333)
T 4ava_A 247 RGIGSF-LIGALSVAARVDGVERFAARM-----------LSDNVPMRTIMDRYGAVWQR 293 (333)
T ss_dssp SSHHHH-HHHHHHHHHHHTTCCEEEEEE-----------ETTCHHHHHHHHTTTCCCEE
T ss_pred CCHHHH-HHHHHHHHHHHCCCcEEEEEE-----------CCCCHHHHHHHHHcCCceec
Confidence 345544 445577788889999999988 34557899999999999875
No 83
>3r9f_A MCCE protein; microcin C7, acetyltransferase, SELF immunity, resistance, A coenzyme A, transferase; HET: COA GSU; 1.20A {Escherichia coli} PDB: 3r95_A* 3r96_A* 3r9e_A* 3r9g_A*
Probab=21.58 E-value=2.2e+02 Score=20.12 Aligned_cols=48 Identities=13% Similarity=0.072 Sum_probs=33.7
Q ss_pred CHHHHHHHHHHHHHHHHH-cCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEEE
Q 039298 102 SPYAAMLAAQDVSTRCKE-LGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 161 (197)
Q Consensus 102 t~~Aa~~aa~~v~~k~~e-lGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~I 161 (197)
.-|+.. +.+.+.+.|.+ +|+..|.+.+ -+.-..+++.+.+.|++....
T Consensus 118 ~Gig~~-ll~~~~~~a~~~~~~~~i~~~v-----------~~~N~~a~~~y~k~GF~~~g~ 166 (188)
T 3r9f_A 118 KGIVTN-AINKLIQEYGDSGVIKRFVIKC-----------IVDNKKSNATALRCGFTLEGV 166 (188)
T ss_dssp SSHHHH-HHHHHHHHHHTTTSCSEEEEEE-----------ETTCHHHHHHHHHTTCEEEEE
T ss_pred CCHHHH-HHHHHHHHHHHhcCeEEEEEEe-----------cCCCHHHHHHHHHCCCeEEeE
Confidence 345544 34446666654 5999999999 344567999999999986544
No 84
>2bue_A AAC(6')-IB; GNAT, transferase, aminoglycoside, fluoroquinolone, acetyltransferase, antibiotic resistance; HET: COA RIO; 1.7A {Escherichia coli} PDB: 1v0c_A* 2vqy_A* 2prb_A* 2qir_A* 2pr8_A*
Probab=21.32 E-value=2.1e+02 Score=20.32 Aligned_cols=47 Identities=11% Similarity=0.154 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHHH-cCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEEE
Q 039298 103 PYAAMLAAQDVSTRCKE-LGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 161 (197)
Q Consensus 103 ~~Aa~~aa~~v~~k~~e-lGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~I 161 (197)
-++.. +.+.+.+.+.+ +|+..|.+.+ -..-..+++.+.+.|++....
T Consensus 130 Gig~~-ll~~~~~~a~~~~g~~~i~~~v-----------~~~N~~a~~~y~k~GF~~~~~ 177 (202)
T 2bue_A 130 GLGTK-LVRALVELLFNDPEVTKIQTDP-----------SPSNLRAIRCYEKAGFERQGT 177 (202)
T ss_dssp SHHHH-HHHHHHHHHHTSTTCCEEEECC-----------CTTCHHHHHHHHHTTCEEEEE
T ss_pred ChHHH-HHHHHHHHHHhCCCCcEEEeCc-----------ccCCHHHHHHHHHcCCEEeee
Confidence 35444 34456677777 6999888877 345567889999999987654
No 85
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=21.12 E-value=1.7e+02 Score=24.02 Aligned_cols=50 Identities=16% Similarity=0.121 Sum_probs=32.5
Q ss_pred HHHHHHHHHHcCccEEEEEEEeeCCCCccCCCC--------ChHHHHHHHHhCCcEEEEE
Q 039298 110 AQDVSTRCKELGITALHIKLRATGGNKTKTPGP--------GAQSALRALARSGMKIGRI 161 (197)
Q Consensus 110 a~~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~--------Gr~~alraL~~~GlkI~~I 161 (197)
.+.+.+.+.++|+..|++....... .+-.+. -.+.+-+.|...|+++..+
T Consensus 38 l~~~l~~aa~~G~~~VEl~~~~~~~--~~~~~~~p~~~~~~~~~~l~~~l~~~GL~i~~~ 95 (305)
T 3obe_A 38 MPNGLNRLAKAGYTDLEIFGYREDT--GKFGDYNPKNTTFIASKDYKKMVDDAGLRISSS 95 (305)
T ss_dssp HHHHHHHHHHHTCCEEEECCBCTTT--CCBCCC----CCCBCHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHcCCCEEEeccccccc--ccccCcCcccccccCHHHHHHHHHHCCCeEEEe
Confidence 3567888899999999987621000 001122 3455666778899999887
No 86
>2pdo_A Acetyltransferase YPEA; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: MSE; 2.00A {Shigella flexneri 2A}
Probab=21.07 E-value=2.1e+02 Score=19.64 Aligned_cols=45 Identities=16% Similarity=0.186 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEE
Q 039298 103 PYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIG 159 (197)
Q Consensus 103 ~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~ 159 (197)
-++.++.. .+.+.+++.|+..+.+.+. .....+++-..+.|++..
T Consensus 85 GiG~~Ll~-~~~~~~~~~g~~~i~l~v~-----------~~n~~a~~~Y~k~GF~~~ 129 (144)
T 2pdo_A 85 GIANALLN-RLEKKLIARGCPKIQINVP-----------EDNDMVLGMYERLGYEHA 129 (144)
T ss_dssp CHHHHHHH-HHHHHHHHTTCCEEEEEEE-----------SSCHHHHHHHHHTTCEEC
T ss_pred cHHHHHHH-HHHHHHHHcCCCEEEEEEe-----------CCCHHHHHHHHHcCCccc
Confidence 45555554 4677889999999998872 334678888899998854
No 87
>2qkp_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.75A {Streptococcus mutans}
Probab=20.86 E-value=1.7e+02 Score=21.61 Aligned_cols=22 Identities=18% Similarity=0.283 Sum_probs=15.5
Q ss_pred EEec-ccceeccccccccccCCCC
Q 039298 160 RIDL-EGLLILGLYYISEDVTPIP 182 (197)
Q Consensus 160 ~I~~-~~~~~~~l~~~~~DvTpiP 182 (197)
-|.+ +|. +.|.+.++.|+|++-
T Consensus 112 Pi~d~~G~-~~G~vev~~Dit~l~ 134 (151)
T 2qkp_A 112 AVRDQAGD-FQGVLEYVQDIKPFF 134 (151)
T ss_dssp EEECTTCC-EEEEEEEEEECGGGG
T ss_pred EEECCCCC-EEEEEEEEEECHHHH
Confidence 3444 465 568888899999874
No 88
>1y9k_A IAA acetyltransferase; structural genomics, midwest center for structural genomics bacillus cereus ATCC 14579, PSI; 2.39A {Bacillus cereus atcc 14579} SCOP: d.108.1.1
Probab=20.80 E-value=2.1e+02 Score=19.69 Aligned_cols=47 Identities=21% Similarity=0.314 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEEE
Q 039298 103 PYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 161 (197)
Q Consensus 103 ~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~I 161 (197)
-++..+ .+.+.+.+.+.|+..+.+.. ......+++.+.+.|++....
T Consensus 77 Gig~~l-l~~~~~~~~~~g~~~i~~~~-----------~~~n~~a~~~y~k~Gf~~~~~ 123 (157)
T 1y9k_A 77 GIGKKL-LRHAVETAKGYGMSKLEVGT-----------GNSSVSQLALYQKCGFRIFSI 123 (157)
T ss_dssp SHHHHH-HHHHHHHHHHTTCSEEEEEE-----------ETTCHHHHHHHHHTTCEEEEE
T ss_pred CHHHHH-HHHHHHHHHHCCCCEEEEEe-----------CCCCHHHHHHHHHCCCEEecc
Confidence 355443 34567778889999988887 233456888889999998765
No 89
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=20.65 E-value=1.2e+02 Score=23.51 Aligned_cols=43 Identities=9% Similarity=0.105 Sum_probs=30.2
Q ss_pred HHHHHHHHHcCccEEEEE-EEeeCCCCccCC-----CCChHHHHHHHHhCCcEEEEE
Q 039298 111 QDVSTRCKELGITALHIK-LRATGGNKTKTP-----GPGAQSALRALARSGMKIGRI 161 (197)
Q Consensus 111 ~~v~~k~~elGi~~l~V~-lr~~gg~~~KG~-----G~Gr~~alraL~~~GlkI~~I 161 (197)
+++.+.+.++|+..|++. . ..+ ....+.+-+.+...|+++..+
T Consensus 17 ~~~l~~~~~~G~~~vEl~~~--------~~~~~~~~~~~~~~~~~~l~~~gl~~~~~ 65 (278)
T 1i60_A 17 KLDLELCEKHGYDYIEIRTM--------DKLPEYLKDHSLDDLAEYFQTHHIKPLAL 65 (278)
T ss_dssp HHHHHHHHHTTCSEEEEETT--------THHHHHTTSSCHHHHHHHHHTSSCEEEEE
T ss_pred HHHHHHHHHhCCCEEEEccH--------HHHHHHhccCCHHHHHHHHHHcCCCeeee
Confidence 446677788999999988 5 221 233455666777889999876
No 90
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=20.43 E-value=72 Score=28.95 Aligned_cols=56 Identities=14% Similarity=0.108 Sum_probs=39.2
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHh-CCcEEEEE
Q 039298 97 DRDESSPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALAR-SGMKIGRI 161 (197)
Q Consensus 97 ~rrkst~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~-~GlkI~~I 161 (197)
++...|-|.+..+++.+++.. ...+....|.| .|+|-=...+.+-|.+ .|.+++-|
T Consensus 183 ~r~~aTg~Gv~~~~~~~~~~~-g~~l~g~~vaV--------qG~GnVG~~~a~~L~e~~GakvVav 239 (415)
T 2tmg_A 183 GREEATGRGVKVCAGLAMDVL-GIDPKKATVAV--------QGFGNVGQFAALLISQELGSKVVAV 239 (415)
T ss_dssp TTTTHHHHHHHHHHHHHHHHT-TCCTTTCEEEE--------ECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CcCcchHHHHHHHHHHHHHHc-CCCcCCCEEEE--------ECCcHHHHHHHHHHHHhcCCEEEEE
Confidence 455677777777766655542 22355677888 7787655677788887 99999977
No 91
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=20.33 E-value=65 Score=29.92 Aligned_cols=56 Identities=14% Similarity=0.143 Sum_probs=40.6
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHcCccEEEEEEEeeCCCCccCCCCChHHHHHHHHhCCcEEEEE
Q 039298 97 DRDESSPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 161 (197)
Q Consensus 97 ~rrkst~~Aa~~aa~~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~Gr~~alraL~~~GlkI~~I 161 (197)
++...|-|....+++.+++.. ...+....|.| .|+|.=...+.+-|.+.|-+|+.|
T Consensus 226 ~r~~aTg~Gv~~~~~~~l~~~-G~~l~g~~vaV--------qG~GnVG~~~a~~L~~~GakvVav 281 (470)
T 2bma_A 226 LRVEATGYGLVYFVLEVLKSL-NIPVEKQTAVV--------SGSGNVALYCVQKLLHLNVKVLTL 281 (470)
T ss_dssp TTTTHHHHHHHHHHHHHHHTT-TCCGGGCEEEE--------ECSSHHHHHHHHHHHHTTCEECEE
T ss_pred CccccchHHHHHHHHHHHHhc-cCCcCCCEEEE--------ECCcHHHHHHHHHHHHCCCEEEEE
Confidence 455677777777766665543 23456778889 788876677888888999999876
No 92
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=20.20 E-value=2.1e+02 Score=23.05 Aligned_cols=45 Identities=20% Similarity=0.271 Sum_probs=29.9
Q ss_pred HHHHHHHHHcCccEEEEEEEeeCCCCccCCCC--------ChHHHHHHHHhCCcEEEEE
Q 039298 111 QDVSTRCKELGITALHIKLRATGGNKTKTPGP--------GAQSALRALARSGMKIGRI 161 (197)
Q Consensus 111 ~~v~~k~~elGi~~l~V~lr~~gg~~~KG~G~--------Gr~~alraL~~~GlkI~~I 161 (197)
+.+.+.++++|+..|++... + ..+.+ ..+.+.+.|...|++|..+
T Consensus 18 ~~~l~~~~~~G~~~vEl~~~---~---~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~ 70 (340)
T 2zds_A 18 EEVCRLARDFGYDGLELACW---G---DHFEVDKALADPSYVDSRHQLLDKYGLKCWAI 70 (340)
T ss_dssp HHHHHHHHHHTCSEEEEESS---T---TTCCHHHHHHCTTHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHcCCCEEEeccc---c---ccCCccccccCHHHHHHHHHHHHHcCCeEEEe
Confidence 45667788999999998761 0 11221 1244566777899999876
Done!