Your job contains 1 sequence.
>039302
AVIKWFAASRTQRRPKERTRTQKKGNGSSSSSIPSLPTKVWQPGVDKLEEGEELQCDPTA
YNSLHAFHIGWPCLSFDILRDTLGLVRNEFPYTAYFVAGSQAEKPSWNSIGVFKVSNISG
KRRELVPNKPATGDEDADGESSDSDDDSDDEEEGGSGTPILQLRKVAHQGCVNRIRAMSQ
NPHICASWADTGHVQVWDFRSHLNALAESETVAGHGAPQVLNQSPLVKFGGHKDEGYAID
WNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFASCS
VDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGG
DSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLSLEKDEEEEAEFKAKTREQ
VNAPEDLPPQLLFIHQGQKDLKELHWHTQVPGMIVSTAADGFNILMPSNIQSTLPQDAV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 039302
(479 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2050388 - symbol:AT2G19540 "AT2G19540" species... 1709 5.9e-176 1
DICTYBASE|DDB_G0291566 - symbol:grwd1 "glutamate-rich WD ... 942 1.1e-94 1
RGD|1310649 - symbol:Grwd1 "glutamate-rich WD repeat cont... 723 1.2e-87 2
UNIPROTKB|Q9BQ67 - symbol:GRWD1 "Glutamate-rich WD repeat... 712 6.4e-87 2
UNIPROTKB|F1RL85 - symbol:GRWD1 "Uncharacterized protein"... 713 1.0e-86 2
FB|FBgn0022288 - symbol:l(2)09851 "lethal (2) 09851" spec... 865 1.6e-86 1
ZFIN|ZDB-GENE-030131-9844 - symbol:grwd1 "glutamate-rich ... 865 1.6e-86 1
UNIPROTKB|Q1JQD2 - symbol:GRWD1 "Glutamate-rich WD repeat... 711 4.4e-86 2
UNIPROTKB|E2RBY0 - symbol:GRWD1 "Uncharacterized protein"... 705 1.2e-85 2
MGI|MGI:2141989 - symbol:Grwd1 "glutamate-rich WD repeat ... 844 2.7e-84 1
WB|WBGene00021899 - symbol:Y54H5A.1 species:6239 "Caenorh... 806 2.9e-80 1
POMBASE|SPBC1711.07 - symbol:SPBC1711.07 "WD repeat prote... 642 1.5e-79 2
ASPGD|ASPL0000069856 - symbol:AN7205 species:162425 "Emer... 677 1.3e-66 1
CGD|CAL0001341 - symbol:orf19.6355 species:5476 "Candida ... 636 3.0e-62 1
UNIPROTKB|Q59PD8 - symbol:RRB1 "Likely nucleolar ribosome... 636 3.0e-62 1
SGD|S000004738 - symbol:RRB1 "Nuclear protein involved in... 607 3.5e-59 1
ZFIN|ZDB-GENE-030131-848 - symbol:rbb4l "retinoblastoma b... 399 3.9e-37 1
UNIPROTKB|O93377 - symbol:rbbp4-a "Histone-binding protei... 398 4.9e-37 1
UNIPROTKB|Q9W7I5 - symbol:RBBP4 "Histone-binding protein ... 395 1.0e-36 1
UNIPROTKB|F2Z4M0 - symbol:RBBP4 "Histone-binding protein ... 394 1.3e-36 1
UNIPROTKB|Q3MHL3 - symbol:RBBP4 "Histone-binding protein ... 394 1.3e-36 1
UNIPROTKB|E2QXR8 - symbol:RBBP4 "Uncharacterized protein"... 394 1.3e-36 1
UNIPROTKB|Q09028 - symbol:RBBP4 "Histone-binding protein ... 394 1.3e-36 1
UNIPROTKB|I3LKT8 - symbol:RBBP4 "Uncharacterized protein"... 394 1.3e-36 1
UNIPROTKB|Q5RF92 - symbol:RBBP4 "Histone-binding protein ... 394 1.3e-36 1
MGI|MGI:1194912 - symbol:Rbbp4 "retinoblastoma binding pr... 394 1.3e-36 1
RGD|1593768 - symbol:Rbbp4 "retinoblastoma binding protei... 394 1.3e-36 1
UNIPROTKB|Q5M7K4 - symbol:rbbp4 "Histone-binding protein ... 394 1.3e-36 1
UNIPROTKB|Q6INH0 - symbol:rbbp4-b "Histone-binding protei... 391 2.7e-36 1
UNIPROTKB|Q6P315 - symbol:rbbp7 "Histone-binding protein ... 389 4.4e-36 1
UNIPROTKB|Q8AVH1 - symbol:rbbp7 "Histone-binding protein ... 389 4.4e-36 1
FB|FBgn0263979 - symbol:Caf1 "Chromatin assembly factor 1... 385 1.2e-35 1
DICTYBASE|DDB_G0282529 - symbol:rbbD "putative Retinoblas... 376 1.1e-34 1
RGD|1563620 - symbol:RGD1563620 "similar to retinoblastom... 372 2.8e-34 1
UNIPROTKB|Q61Y48 - symbol:lin-53 "Probable histone-bindin... 366 1.2e-33 1
WB|WBGene00003036 - symbol:lin-53 species:6239 "Caenorhab... 362 3.2e-33 1
UNIPROTKB|P90916 - symbol:lin-53 "Probable histone-bindin... 362 3.2e-33 1
ZFIN|ZDB-GENE-030131-445 - symbol:rbb4 "retinoblastoma bi... 358 8.5e-33 1
UNIPROTKB|Q3SWX8 - symbol:RBBP7 "Histone-binding protein ... 353 2.9e-32 1
UNIPROTKB|E2RM49 - symbol:RBBP7 "Uncharacterized protein"... 353 2.9e-32 1
UNIPROTKB|E2RM67 - symbol:RBBP7 "Uncharacterized protein"... 353 2.9e-32 1
UNIPROTKB|E9PC52 - symbol:RBBP7 "Histone-binding protein ... 353 2.9e-32 1
UNIPROTKB|Q16576 - symbol:RBBP7 "Histone-binding protein ... 353 2.9e-32 1
UNIPROTKB|F1SQR0 - symbol:LOC100519001 "Uncharacterized p... 353 2.9e-32 1
UNIPROTKB|I3LV46 - symbol:LOC100519001 "Uncharacterized p... 353 2.9e-32 1
UNIPROTKB|K7GRD3 - symbol:LOC100519001 "Uncharacterized p... 353 2.9e-32 1
UNIPROTKB|Q4R304 - symbol:RBBP7 "Histone-binding protein ... 353 2.9e-32 1
MGI|MGI:1194910 - symbol:Rbbp7 "retinoblastoma binding pr... 353 2.9e-32 1
RGD|620125 - symbol:Rbbp7 "retinoblastoma binding protein... 353 2.9e-32 1
UNIPROTKB|Q9I8G9 - symbol:RBBP7 "Histone-binding protein ... 351 4.7e-32 1
TAIR|locus:2059856 - symbol:MSI2 "AT2G16780" species:3702... 345 2.0e-31 1
UNIPROTKB|Q5R654 - symbol:RBBP7 "Histone-binding protein ... 340 6.9e-31 1
TAIR|locus:2131551 - symbol:MSI3 "MULTICOPY SUPPRESSOR OF... 336 1.8e-30 1
TAIR|locus:2161253 - symbol:MSI1 "MULTICOPY SUPRESSOR OF ... 327 1.6e-29 1
POMBASE|SPCC1672.10 - symbol:mis16 "kinetochore protein M... 313 8.3e-28 1
WB|WBGene00004312 - symbol:rba-1 species:6239 "Caenorhabd... 289 4.6e-24 1
ASPGD|ASPL0000017699 - symbol:AN8187 species:162425 "Emer... 267 6.7e-22 2
DICTYBASE|DDB_G0279801 - symbol:pex7 "peroxisomal biogene... 238 1.5e-19 1
UNIPROTKB|H0YCT5 - symbol:RBBP4 "Histone-binding protein ... 232 7.0e-19 1
UNIPROTKB|B4DRT0 - symbol:RBBP4 "Histone-binding protein ... 227 2.5e-18 1
TAIR|locus:2050372 - symbol:FVE species:3702 "Arabidopsis... 248 3.4e-18 2
CGD|CAL0005992 - symbol:orf19.3581 species:5476 "Candida ... 239 1.3e-17 1
SGD|S000000782 - symbol:HAT2 "Subunit of the Hat1p-Hat2p ... 235 2.7e-17 1
TAIR|locus:2134408 - symbol:NFC5 "AT4G29730" species:3702... 237 3.2e-17 1
TAIR|locus:2029939 - symbol:PEX7 "AT1G29260" species:3702... 223 9.6e-17 1
CGD|CAL0005349 - symbol:HAT2 species:5476 "Candida albica... 221 9.4e-16 1
UNIPROTKB|Q59RH5 - symbol:HAT2 "Histone acetyltransferase... 221 9.4e-16 1
SGD|S000000399 - symbol:MSI1 "Subunit of chromatin assemb... 213 1.2e-14 1
UNIPROTKB|G4MRA1 - symbol:MGG_04693 "WD repeat-containing... 210 1.2e-14 1
DICTYBASE|DDB_G0271788 - symbol:wdr57 "putative U5 small ... 207 2.9e-14 1
UNIPROTKB|Q17GR9 - symbol:Ciao1 "Probable cytosolic iron-... 188 4.9e-14 2
UNIPROTKB|F1PUU2 - symbol:NLE1 "Uncharacterized protein" ... 206 8.0e-14 1
UNIPROTKB|E1BYP4 - symbol:PEX7 "Uncharacterized protein" ... 196 8.3e-14 2
UNIPROTKB|Q58D20 - symbol:NLE1 "Notchless protein homolog... 205 1.4e-13 1
UNIPROTKB|Q9NVX2 - symbol:NLE1 "Notchless protein homolog... 204 1.8e-13 1
MGI|MGI:2429770 - symbol:Nle1 "notchless homolog 1 (Droso... 203 2.3e-13 1
UNIPROTKB|I3LTI2 - symbol:NLE1 "Uncharacterized protein" ... 203 2.3e-13 1
RGD|1308301 - symbol:Nle1 "notchless homolog 1 (Drosophil... 203 2.3e-13 1
POMBASE|SPAC29A4.18 - symbol:prw1 "Clr6 histone deacetyla... 201 6.0e-13 2
FB|FBgn0031229 - symbol:CG3436 species:7227 "Drosophila m... 195 6.7e-13 1
UNIPROTKB|Q08DL6 - symbol:PEX7 "Peroxisomal biogenesis fa... 193 8.3e-13 1
UNIPROTKB|O00628 - symbol:PEX7 "Peroxisomal targeting sig... 189 8.9e-13 2
UNIPROTKB|E2QYX6 - symbol:PEX7 "Uncharacterized protein" ... 186 1.3e-12 2
FB|FBgn0035922 - symbol:Pex7 "Peroxin 7" species:7227 "Dr... 192 1.4e-12 1
RGD|1308483 - symbol:Pex7 "peroxisomal biogenesis factor ... 190 1.7e-12 1
UNIPROTKB|Q8R537 - symbol:PEX7 "Peroxisomal targeting sig... 188 3.0e-12 1
UNIPROTKB|F1S687 - symbol:PEX7 "Uncharacterized protein" ... 184 3.2e-12 2
MGI|MGI:1321392 - symbol:Pex7 "peroxisomal biogenesis fac... 187 3.9e-12 1
UNIPROTKB|B0XAF3 - symbol:Ciao1 "Probable cytosolic iron-... 188 4.0e-12 1
ASPGD|ASPL0000041012 - symbol:AN9085 species:162425 "Emer... 185 1.1e-11 1
ZFIN|ZDB-GENE-040426-978 - symbol:snrnp40 "small nuclear ... 184 1.3e-11 1
UNIPROTKB|F1NII4 - symbol:NLE1 "Uncharacterized protein" ... 187 1.5e-11 1
GENEDB_PFALCIPARUM|PFA0520c - symbol:PFA0520c "chromatin ... 181 5.6e-11 1
UNIPROTKB|Q8I238 - symbol:PFA_0520c "Chromatin assembly f... 181 5.6e-11 1
ZFIN|ZDB-GENE-040426-1954 - symbol:katnb1 "katanin p80 (W... 183 7.5e-11 1
TAIR|locus:2043929 - symbol:AT2G43770 "AT2G43770" species... 177 7.8e-11 1
POMBASE|SPAC227.12 - symbol:SPAC227.12 "U4/U6 x U5 tri-sn... 179 1.0e-10 1
TAIR|locus:2057381 - symbol:emb1345 "AT2G26060" species:3... 174 1.9e-10 1
UNIPROTKB|Q5RBZ2 - symbol:WDR77 "Methylosome protein 50" ... 173 2.2e-10 1
DICTYBASE|DDB_G0270992 - symbol:sec31 "putative transport... 182 2.4e-10 1
WARNING: Descriptions of 635 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2050388 [details] [associations]
symbol:AT2G19540 "AT2G19540" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319 EMBL:AC005917
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000036730
KO:K14848 OMA:NRLMMLR UniGene:At.24966 EMBL:AF370506 EMBL:AY128814
IPI:IPI00526267 PIR:A84578 RefSeq:NP_179544.1
ProteinModelPortal:Q9ZUN8 SMR:Q9ZUN8 STRING:Q9ZUN8 PaxDb:Q9ZUN8
PRIDE:Q9ZUN8 EnsemblPlants:AT2G19540.1 GeneID:816473
KEGG:ath:AT2G19540 TAIR:At2g19540 InParanoid:Q9ZUN8
PhylomeDB:Q9ZUN8 ProtClustDB:CLSN2683177 ArrayExpress:Q9ZUN8
Genevestigator:Q9ZUN8 Uniprot:Q9ZUN8
Length = 469
Score = 1709 (606.7 bits), Expect = 5.9e-176, P = 5.9e-176
Identities = 314/464 (67%), Positives = 358/464 (77%)
Query: 14 RPKERTRTQKKGNGXXXXXIPSLPTKVWQPGVDKLEEGEELQCDPTAYNSLHAFHIGWPC 73
+ K + + +KK IPS+PT+VWQPGVD LE+GEELQCDP+AYNSLH FH+GWPC
Sbjct: 6 KTKAKRKNKKKAEASSSE-IPSIPTRVWQPGVDTLEDGEELQCDPSAYNSLHGFHVGWPC 64
Query: 74 LSFDILRDTLGLVRNEFPYTAYFVAGSQAEKPSWNSIGVFKVSNISGKRRELVPNKPATX 133
LSFDIL D LGL R EFP+T Y VAG+QAEK + NSIG+FK++N+SGKRR++VP K
Sbjct: 65 LSFDILGDKLGLNRTEFPHTLYMVAGTQAEKAAHNSIGLFKITNVSGKRRDVVP-KTFGN 123
Query: 134 XXXXXXXXXXXXXXXXXXXXXXXXTPILQLRKVAHQGCVNRIRAMSQNPHICASWADTGH 193
TP +Q+R+VAH GCVNRIRAM QN HIC SWAD+GH
Sbjct: 124 GEDEDEDDEDDSDSDDDDGDEASKTPNIQVRRVAHHGCVNRIRAMPQNSHICVSWADSGH 183
Query: 194 VQVWDFRSHLNALAESETVAGHGAPQVLNQSPLVKFGGHKDEGYAIDWNPVAPGRLVSGD 253
VQVWD SHLNALAESET G VLNQ+PLV F GHKDEGYAIDW+P GRL+SGD
Sbjct: 184 VQVWDMSSHLNALAESETEGKDGTSPVLNQAPLVNFSGHKDEGYAIDWSPATAGRLLSGD 243
Query: 254 CNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVG 313
C S IHLWEPAS +W VDP PF GH ASVEDLQWSP E +VFASCSVDG++A+WD R+G
Sbjct: 244 CKSMIHLWEPAS-GSWAVDPIPFAGHTASVEDLQWSPAEENVFASCSVDGSVAVWDIRLG 302
Query: 314 KSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHP 373
KS +SFKAHNADVNVISWNRLASC+LASGSDDGTFSI DLRL+KGGD+VVAHFEYHKHP
Sbjct: 303 KSPALSFKAHNADVNVISWNRLASCMLASGSDDGTFSIRDLRLIKGGDAVVAHFEYHKHP 362
Query: 374 VTSIEWSPHEGSTLAVSSADNQLTIWDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLF 433
+TSIEWS HE STLAV+S DNQLTIWDLSL T+E VN P+DLPPQLLF
Sbjct: 363 ITSIEWSAHEASTLAVTSGDNQLTIWDLSLEKDEEEEAEFNAQTKELVNTPQDLPPQLLF 422
Query: 434 IHQGQKDLKELHWHTQVPGMIVSTAADGFNILMPSNIQSTLPQD 477
+HQGQKDLKELHWH Q+PGMI+STA DGFNILMP NIQ+TLP +
Sbjct: 423 VHQGQKDLKELHWHNQIPGMIISTAGDGFNILMPYNIQNTLPSE 466
>DICTYBASE|DDB_G0291566 [details] [associations]
symbol:grwd1 "glutamate-rich WD repeat-containing
protein 1" species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0291566 EMBL:AAFI02000177 GenomeReviews:CM000155_GR
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052
Pfam:PF12265 KO:K14848 OMA:NRLMMLR RefSeq:XP_635306.1
ProteinModelPortal:Q54ED4 STRING:Q54ED4 EnsemblProtists:DDB0267050
GeneID:8628250 KEGG:ddi:DDB_G0291566 ProtClustDB:CLSZ2732316
Uniprot:Q54ED4
Length = 482
Score = 942 (336.7 bits), Expect = 1.1e-94, P = 1.1e-94
Identities = 195/435 (44%), Positives = 257/435 (59%)
Query: 37 PTKVWQPGVDKLEEGEELQCDPTAYNSLHAFHIGWPCLSFDILRDTLGLVRNEFPYTAYF 96
P KVW+ GVD LEE E L D TAY+ +H+ + WPCLSF ++D LG RN++P+T Y
Sbjct: 68 PKKVWRAGVDPLEEDEVLDYDSTAYDMMHSMSVEWPCLSFHPIKDELGAQRNKYPHTMYL 127
Query: 97 VAGSQAEKPSWNSIGVFKVSNISGKRRELVPNKPATXXXXXXXXXXXXXXXXXXXXXXXX 156
VAG+QA++ N + + K ++L K
Sbjct: 128 VAGTQADEAKNNKVIIMKA-------KQLHKTKHDDEDSDDDEDSDDDEESDDEDDEDKD 180
Query: 157 XTPILQLRKVAHQGCVNRIRAMSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGHG 216
P LQL + H G VNRIR+M Q +I A+W+D V +W+ +HL AL ++ETVA
Sbjct: 181 VDPELQLAFINHNGAVNRIRSMDQQSNIVATWSDNRSVYIWNIANHLKAL-DNETVA--- 236
Query: 217 APQVLNQSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPF 276
P+ +PL H EGYA+DW+P GRL +GDCN+ I + AS++TW D F
Sbjct: 237 -PK--QTAPLHTISNHSIEGYALDWSPKIAGRLATGDCNNSIFVTN-ASESTWKTDTQAF 292
Query: 277 IGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLA 336
GH SVED+QWSP+E VFASCS+D + IWD R K A+ + KAH ADVNVISW+R
Sbjct: 293 KGHTESVEDIQWSPSEEKVFASCSIDQTVRIWDIRKPKPAI-TVKAHTADVNVISWSRNV 351
Query: 337 SCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQL 396
LL SG DDG+F + DLR K +S V+ F+YH P+TSIEW+P+E S + VSS+D+Q+
Sbjct: 352 EYLLVSGCDDGSFRVWDLRAFKD-NSPVSDFKYHTGPITSIEWNPYEESQVIVSSSDDQV 410
Query: 397 TIWDLSLXXXXXXXXXXXXXTREQVNAPEDL--PPQLLFIHQGQKDLKELHWHTQVPGMI 454
TIWD SL T N +D PPQL FIHQGQ D+KE+HWH Q+P +
Sbjct: 411 TIWDFSLEEDTEEF------TNANANPDDDFQYPPQLFFIHQGQHDIKEVHWHPQIPHVA 464
Query: 455 VSTAADGFNILMPSN 469
+ST+ DGFNI SN
Sbjct: 465 ISTSIDGFNIFKSSN 479
>RGD|1310649 [details] [associations]
symbol:Grwd1 "glutamate-rich WD repeat containing 1"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310649 GO:GO:0005737
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 CTD:83743 HOGENOM:HOG000036730
HOVERGEN:HBG051847 KO:K14848 OrthoDB:EOG4CG084 EMBL:BC083883
IPI:IPI00367307 RefSeq:NP_001012067.1 UniGene:Rn.33523
ProteinModelPortal:Q5XI13 STRING:Q5XI13 PRIDE:Q5XI13 GeneID:308592
KEGG:rno:308592 UCSC:RGD:1310649 NextBio:659230 ArrayExpress:Q5XI13
Genevestigator:Q5XI13 GermOnline:ENSRNOG00000021058 Uniprot:Q5XI13
Length = 445
Score = 723 (259.6 bits), Expect = 1.2e-87, Sum P(2) = 1.2e-87
Identities = 144/311 (46%), Positives = 188/311 (60%)
Query: 159 PILQLRKVAHQGCVNRIRA--MSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGHG 216
P L+L V H G +NR+R + + P + W++ G V+V+ R L + + + +A
Sbjct: 138 PQLELAMVPHYGGINRVRVSWLGEEP-VAGVWSEKGQVEVFALRRLLQVVDDPQALAIFL 196
Query: 217 APQVLNQSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPF 276
+ P+ F GH EG+A+DW+P PGRL++GDC IHLW P +WNVD PF
Sbjct: 197 RDEQARVKPIFSFAGHMGEGFALDWSPRVPGRLLTGDCQKNIHLWTPTDGGSWNVDQRPF 256
Query: 277 IGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRV--GKSALMSFKA-HNADVNVISWN 333
+GH SVEDLQWSPTE VFASCS D +I IWD R GK+ +++ A H+ DVNVISW+
Sbjct: 257 VGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTAAAHDGDVNVISWS 316
Query: 334 RLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSAD 393
R LL SG DDGT + DLR K G S VA F+ H PVTS+EW P + A S AD
Sbjct: 317 RREPFLL-SGGDDGTLKVWDLRQFKSG-SPVATFKQHVAPVTSVEWHPQDSGVFAASGAD 374
Query: 394 NQLTIWDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQKDLKELHWHTQVPGM 453
NQ+T WDL++ T + A LP QLLF+HQG+ DLKELHWH Q PG+
Sbjct: 375 NQITQWDLAVERDPESGETE---TDPGLAA---LPQQLLFVHQGETDLKELHWHPQCPGV 428
Query: 454 IVSTAADGFNI 464
++STA GF +
Sbjct: 429 LISTALSGFTV 439
Score = 172 (65.6 bits), Expect = 1.2e-87, Sum P(2) = 1.2e-87
Identities = 39/87 (44%), Positives = 50/87 (57%)
Query: 37 PTKVWQPGVDK-LEEGEELQCDPTAYNSLHAFHIGWPCLSFDILRDTLGLVRNEFPYTAY 95
P++V+ PG L EGEEL D AY H G PCLSFDI+RD LG R E P + Y
Sbjct: 29 PSQVYLPGRGPPLGEGEELVMDEEAYVLYHRAQTGAPCLSFDIVRDHLGDNRTELPLSLY 88
Query: 96 FVAGSQAEKPSWNSIGVFKVSNISGKR 122
AG+QAE N + + ++ N+ G R
Sbjct: 89 LCAGTQAESAQSNRLMMLRMHNLHGTR 115
>UNIPROTKB|Q9BQ67 [details] [associations]
symbol:GRWD1 "Glutamate-rich WD repeat-containing protein
1" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
CTD:83743 HOGENOM:HOG000036730 HOVERGEN:HBG051847 KO:K14848
OMA:NRLMMLR OrthoDB:EOG4CG084 EMBL:AF337808 EMBL:BC002440
EMBL:AB075822 IPI:IPI00027831 RefSeq:NP_113673.3 UniGene:Hs.400625
ProteinModelPortal:Q9BQ67 SMR:Q9BQ67 IntAct:Q9BQ67
MINT:MINT-1148872 STRING:Q9BQ67 PhosphoSite:Q9BQ67 DMDM:18202731
SWISS-2DPAGE:Q9BQ67 PaxDb:Q9BQ67 PeptideAtlas:Q9BQ67 PRIDE:Q9BQ67
DNASU:83743 Ensembl:ENST00000253237 GeneID:83743 KEGG:hsa:83743
UCSC:uc002pjd.2 GeneCards:GC19P048949 H-InvDB:HIX0080107
HGNC:HGNC:21270 HPA:HPA042643 MIM:610597 neXtProt:NX_Q9BQ67
PharmGKB:PA134897548 InParanoid:Q9BQ67 PhylomeDB:Q9BQ67
GenomeRNAi:83743 NextBio:72761 ArrayExpress:Q9BQ67 Bgee:Q9BQ67
CleanEx:HS_GRWD1 Genevestigator:Q9BQ67 GermOnline:ENSG00000105447
Uniprot:Q9BQ67
Length = 446
Score = 712 (255.7 bits), Expect = 6.4e-87, Sum P(2) = 6.4e-87
Identities = 143/311 (45%), Positives = 183/311 (58%)
Query: 159 PILQLRKVAHQGCVNRIRA--MSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGHG 216
P L+L V H G +NR+R + + P + W++ G V+V+ R L + E + +A
Sbjct: 139 PQLELAMVPHYGGINRVRVSWLGEEP-VAGVWSEKGQVEVFALRRLLQVVEEPQALAAFL 197
Query: 217 APQVLNQSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPF 276
+ P+ F GH EG+A+DW+P GRL++GDC IHLW P +W+VD PF
Sbjct: 198 RDEQAQMKPIFSFAGHMGEGFALDWSPRVTGRLLTGDCQKNIHLWTPTDGGSWHVDQRPF 257
Query: 277 IGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSA---LMSFKAHNADVNVISWN 333
+GH SVEDLQWSPTE+ VFASCS D +I IWD R S L + AH+ DVNVISW+
Sbjct: 258 VGHTRSVEDLQWSPTENTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVISWS 317
Query: 334 RLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSAD 393
R LL SG DDG I DLR K G S VA F+ H PVTS+EW P + A S AD
Sbjct: 318 RREPFLL-SGGDDGALKIWDLRQFKSG-SPVATFKQHVAPVTSVEWHPQDSGVFAASGAD 375
Query: 394 NQLTIWDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQKDLKELHWHTQVPGM 453
+Q+T WDL++ E DLP QLLF+HQG+ +LKELHWH Q PG+
Sbjct: 376 HQITQWDLAVERDPEAGDV------EADPGLADLPQQLLFVHQGETELKELHWHPQCPGL 429
Query: 454 IVSTAADGFNI 464
+VSTA GF I
Sbjct: 430 LVSTALSGFTI 440
Score = 176 (67.0 bits), Expect = 6.4e-87, Sum P(2) = 6.4e-87
Identities = 45/117 (38%), Positives = 60/117 (51%)
Query: 7 AASRTQRRPKERTRTQKKGNGXXXXXIPSLPTKVWQPGVDK-LEEGEELQCDPTAYNSLH 65
AA + +RR E + +G P+ +V+ PG L EGEEL D AY H
Sbjct: 2 AARKGRRRTCETGEPMEAESGDTSSEGPA---QVYLPGRGPPLREGEELVMDEEAYVLYH 58
Query: 66 AFHIGWPCLSFDILRDTLGLVRNEFPYTAYFVAGSQAEKPSWNSIGVFKVSNISGKR 122
G PCLSFDI+RD LG R E P T Y AG+QAE N + + ++ N+ G +
Sbjct: 59 RAQTGAPCLSFDIVRDHLGDNRTELPLTLYLCAGTQAESAQSNRLMMLRMHNLHGTK 115
>UNIPROTKB|F1RL85 [details] [associations]
symbol:GRWD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
GeneTree:ENSGT00550000075124 KO:K14848 OMA:NRLMMLR EMBL:FP102301
RefSeq:XP_003127319.1 UniGene:Ssc.24214 Ensembl:ENSSSCT00000003475
GeneID:100521273 KEGG:ssc:100521273 Uniprot:F1RL85
Length = 445
Score = 713 (256.0 bits), Expect = 1.0e-86, Sum P(2) = 1.0e-86
Identities = 143/311 (45%), Positives = 182/311 (58%)
Query: 159 PILQLRKVAHQGCVNRIRA--MSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGHG 216
P L+L V H G +NR+R + + P + W++ G V+V+ R L + + + +A
Sbjct: 138 PQLELAMVPHYGGINRVRVSWLGEEP-VAGVWSEKGQVEVFALRRLLQVVDDPQALATFL 196
Query: 217 APQVLNQSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPF 276
+ P+ F GH EG+A+DW+P PGRL++GDC IHLW P +W+VD PF
Sbjct: 197 RDEQARVKPIFAFSGHMGEGFALDWSPRVPGRLLTGDCQKNIHLWTPTDSGSWHVDQRPF 256
Query: 277 IGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSA---LMSFKAHNADVNVISWN 333
+GH SVEDLQWSPTE VFASCS D +I IWD R S L + AHN DVNVISW+
Sbjct: 257 VGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTPAAHNGDVNVISWS 316
Query: 334 RLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSAD 393
R LL SG DDG + DLR K G S VA F+ H PVTS+EW P + A S AD
Sbjct: 317 RQEPFLL-SGGDDGALKVWDLRQFKSG-SPVATFKQHVAPVTSVEWHPQDSGVFAASGAD 374
Query: 394 NQLTIWDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQKDLKELHWHTQVPGM 453
NQ+T WDL++ E LP QLLF+HQG+ DLKELHWH Q PG+
Sbjct: 375 NQITQWDLAVERDPEAGDT------ETDPGLVGLPQQLLFVHQGETDLKELHWHPQCPGV 428
Query: 454 IVSTAADGFNI 464
+VSTA GF +
Sbjct: 429 LVSTALSGFTV 439
Score = 173 (66.0 bits), Expect = 1.0e-86, Sum P(2) = 1.0e-86
Identities = 39/87 (44%), Positives = 49/87 (56%)
Query: 37 PTKVWQPGVDK-LEEGEELQCDPTAYNSLHAFHIGWPCLSFDILRDTLGLVRNEFPYTAY 95
P +V+ PG L EGEEL D AY H G PCLSFDI+RD LG R E P T Y
Sbjct: 29 PPQVYLPGRGPPLREGEELVMDEEAYVLYHRAQTGAPCLSFDIVRDHLGDNRTELPLTLY 88
Query: 96 FVAGSQAEKPSWNSIGVFKVSNISGKR 122
AG+QAE N + + ++ N+ G +
Sbjct: 89 LCAGTQAESAQSNRLMMLRMHNLHGTK 115
>FB|FBgn0022288 [details] [associations]
symbol:l(2)09851 "lethal (2) 09851" species:7227 "Drosophila
melanogaster" [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE013599 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 GeneTree:ENSGT00550000075124
KO:K14848 OMA:NRLMMLR EMBL:AY071477 EMBL:AY128462
RefSeq:NP_610182.3 UniGene:Dm.1493 UniGene:Dm.36762 SMR:Q8SYL1
IntAct:Q8SYL1 STRING:Q8SYL1 EnsemblMetazoa:FBtr0086043 GeneID:46662
KEGG:dme:Dmel_CG12792 UCSC:CG12792-RA FlyBase:FBgn0022288
InParanoid:Q8SYL1 OrthoDB:EOG441NSN GenomeRNAi:46662 NextBio:838859
Uniprot:Q8SYL1
Length = 456
Score = 865 (309.6 bits), Expect = 1.6e-86, P = 1.6e-86
Identities = 185/435 (42%), Positives = 243/435 (55%)
Query: 34 PSLPTKVWQPGVDKLEEGEELQCDPTAYNSLHAFHIGWPCLSFDILRDTLGLVRNEFPYT 93
P P +V+ PG KL + EEL CD +AY LH G PCLSFD++ D LG R FP T
Sbjct: 37 PKAPKEVYLPGT-KLADDEELVCDESAYVMLHQASTGAPCLSFDVIPDELGSGRQSFPMT 95
Query: 94 AYFVAGSQAEKPSWNSIGVFKVSNISGKRRELVPNKPATXXXXXXXXXXXXXXXXXXXXX 153
AY VAG+QA + N++ V K+SN+ +K T
Sbjct: 96 AYIVAGTQASRAHVNNLIVMKMSNL---------HK--TQDNDGDEDEELEDDQDDVTDR 144
Query: 154 XXXXTPILQLRKVAHQGCVNRIRAMSQ-NPHICASWADTGHVQVWDFRSHLNALAESETV 212
P + V HQGCVNR+RA N ASW++ G V +WD L A+ ++
Sbjct: 145 EELKKPQMTCALVKHQGCVNRVRARRLGNSVYAASWSELGRVNIWDLTQPLQAVENAQLA 204
Query: 213 AGHGAPQVLNQSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVD 272
+ + P+ FGGH+ EG+AIDW+P A G L +GDC IH+W P D TW VD
Sbjct: 205 KQYEQSEA---RPVFTFGGHQQEGFAIDWSPSADGVLATGDCRRDIHVWTPVEDGTWKVD 261
Query: 273 PNPFIGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVG--KSALMSFK-AHNADVNV 329
P GH+ SVEDLQWSP E V ASCSVD I IWD R K+ +++ + AH +DVNV
Sbjct: 262 QRPLAGHSQSVEDLQWSPNERSVLASCSVDKTIRIWDCRASPQKACMLTCEDAHQSDVNV 321
Query: 330 ISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAV 389
ISWNR +ASG DDG I DLR + +A F++H +T++EWSP E + LA
Sbjct: 322 ISWNRNEP-FIASGGDDGYLHIWDLRQFQS-KKPIATFKHHTDHITTVEWSPAEATVLAS 379
Query: 390 SSADNQLTIWDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQKDLKELHWHTQ 449
D+Q+ +WDL++ + +N LPPQLLFIHQGQK++KELHWH Q
Sbjct: 380 GGDDDQIALWDLAVEKDIDQAVDPAQ-NEDVLNK---LPPQLLFIHQGQKEIKELHWHPQ 435
Query: 450 VPGMIVSTAADGFNI 464
+PG+++STA GFNI
Sbjct: 436 LPGVLLSTAHSGFNI 450
>ZFIN|ZDB-GENE-030131-9844 [details] [associations]
symbol:grwd1 "glutamate-rich WD repeat containing
1" species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-9844
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 GeneTree:ENSGT00550000075124
EMBL:CU459065 IPI:IPI00490298 Ensembl:ENSDART00000121998
ArrayExpress:F1QGP3 Bgee:F1QGP3 Uniprot:F1QGP3
Length = 452
Score = 865 (309.6 bits), Expect = 1.6e-86, P = 1.6e-86
Identities = 179/428 (41%), Positives = 247/428 (57%)
Query: 39 KVWQPGVDKLEEGEELQCDPTAYNSLHAFHIGWPCLSFDILRDTLGLVRNEFPYTAYFVA 98
KV+ PG+ L+ GEEL+ D +AY H G PCLSFD++ D G R +FP + A
Sbjct: 42 KVYVPGLQPLQPGEELEMDHSAYRMYHECQTGAPCLSFDVVLDGEGDRREQFPLSMVLCA 101
Query: 99 GSQAEKPSWNSIGVFKVSNISGKRRELVPNKPATXXXXXXXXXXXXXXXXXXXXXXXXXT 158
G+QA+ N + V ++ N+ G ++ +K +
Sbjct: 102 GTQADTALSNRLIVMRMHNLQGTEKKKDEDKSSDEESDEDEDDEDEDKK----------- 150
Query: 159 PILQLRKVAHQGCVNRIRAMSQNPH-ICASWADTGHVQVWDFRSHLNALAESETVAGHGA 217
P L+L + H G +NR+R + + A W++ G V+++D R L A+ S ++
Sbjct: 151 PQLELAMMPHYGGINRVRVTQRGEQTLAAVWSEKGQVEIFDLRLQLEAVHNSTAMSAF-I 209
Query: 218 PQVLNQSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFI 277
Q +PL F GH EG+AIDW+P PGR+VSGDC IH+WEP TW +D PF
Sbjct: 210 KQEKEATPLFSFAGHMSEGFAIDWSPKVPGRMVSGDCKKNIHVWEPQEGGTWKIDQRPFS 269
Query: 278 GHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSF-KAHNADVNVISWNRLA 336
H+ SVEDLQWSPTE+ VFASCSVD +I IWD R ++++S +AH++DVNVISWNR
Sbjct: 270 SHSKSVEDLQWSPTEATVFASCSVDQSIRIWDIRAPPNSMLSANEAHSSDVNVISWNRTE 329
Query: 337 SCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQL 396
+L SG DDG + DLR + G V A F+ H PVTS++WSP + S A S AD+ +
Sbjct: 330 PFIL-SGGDDGLLKVWDLRQFQSGRPV-ASFKQHSAPVTSVQWSPVDSSVFAASGADDVI 387
Query: 397 TIWDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQKDLKELHWHTQVPGMIVS 456
+ WDLS+ E V + LPPQLLF+HQGQK++KELHWH Q+PG+++S
Sbjct: 388 SQWDLSVESCDMGGQA------EDV---KQLPPQLLFLHQGQKEVKELHWHPQIPGVLIS 438
Query: 457 TAADGFNI 464
TA GFNI
Sbjct: 439 TALSGFNI 446
>UNIPROTKB|Q1JQD2 [details] [associations]
symbol:GRWD1 "Glutamate-rich WD repeat-containing protein
1" species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:BC116037 IPI:IPI00715008
RefSeq:NP_001069707.1 UniGene:Bt.3201 ProteinModelPortal:Q1JQD2
STRING:Q1JQD2 Ensembl:ENSBTAT00000000088 GeneID:540739
KEGG:bta:540739 CTD:83743 GeneTree:ENSGT00550000075124
HOGENOM:HOG000036730 HOVERGEN:HBG051847 InParanoid:Q1JQD2 KO:K14848
OMA:NRLMMLR OrthoDB:EOG4CG084 NextBio:20878807 Uniprot:Q1JQD2
Length = 446
Score = 711 (255.3 bits), Expect = 4.4e-86, Sum P(2) = 4.4e-86
Identities = 141/311 (45%), Positives = 182/311 (58%)
Query: 159 PILQLRKVAHQGCVNRIRA--MSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGHG 216
P L+L V H G +NR+R + + P + W++ G V+V+ R L + + + +A
Sbjct: 139 PQLELAMVPHYGGINRVRVSWLGEEP-VAGVWSEKGQVEVFALRRLLQVVDDPQALATFL 197
Query: 217 APQVLNQSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPF 276
+ P+ F GH EG+A+DW+P PGRL++GDC IHLW P +W+VD PF
Sbjct: 198 RDEQTRMKPIFAFSGHMGEGFALDWSPRVPGRLLTGDCQKNIHLWTPTDGGSWHVDQRPF 257
Query: 277 IGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSA---LMSFKAHNADVNVISWN 333
+GH SVEDLQWSPTE VFASCS D +I IWD R S L + AH+ DVNVI+W+
Sbjct: 258 VGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVINWS 317
Query: 334 RLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSAD 393
LL SG DDG + DLR K G S VA F+ H PVTS+EW P + A S AD
Sbjct: 318 HREPFLL-SGGDDGALKVWDLRQFKSG-SPVATFKQHVAPVTSVEWHPQDSGVFAASGAD 375
Query: 394 NQLTIWDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQKDLKELHWHTQVPGM 453
NQ+T WDL++ E DLP QLLF+HQG+ DLKELHWH Q PG+
Sbjct: 376 NQITQWDLAVERDPEAGDA------ETDPGLADLPQQLLFVHQGETDLKELHWHPQCPGV 429
Query: 454 IVSTAADGFNI 464
+VSTA GF +
Sbjct: 430 LVSTALSGFTV 440
Score = 169 (64.5 bits), Expect = 4.4e-86, Sum P(2) = 4.4e-86
Identities = 46/120 (38%), Positives = 60/120 (50%)
Query: 7 AASRTQRR---PKERTRTQKKGNGXXXXXIPSLPTKVWQPGVDK-LEEGEELQCDPTAYN 62
AA + +RR P E T+ + G +V+ PG L EGEEL D AY
Sbjct: 2 AALKGRRRTCEPGESMETESQETGSKGQA------QVYLPGRGPPLREGEELVMDEEAYV 55
Query: 63 SLHAFHIGWPCLSFDILRDTLGLVRNEFPYTAYFVAGSQAEKPSWNSIGVFKVSNISGKR 122
H G PCLSFDI+RD LG R E P T Y AG+QAE N + + ++ N+ G +
Sbjct: 56 LYHRAQTGAPCLSFDIVRDHLGDNRTELPLTLYLCAGTQAESSQSNRLMMLRMHNLHGTK 115
>UNIPROTKB|E2RBY0 [details] [associations]
symbol:GRWD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
CTD:83743 GeneTree:ENSGT00550000075124 KO:K14848 OMA:NRLMMLR
EMBL:AAEX03000823 RefSeq:XP_854878.1 ProteinModelPortal:E2RBY0
Ensembl:ENSCAFT00000006420 GeneID:612058 KEGG:cfa:612058
NextBio:20897592 Uniprot:E2RBY0
Length = 440
Score = 705 (253.2 bits), Expect = 1.2e-85, Sum P(2) = 1.2e-85
Identities = 141/311 (45%), Positives = 182/311 (58%)
Query: 159 PILQLRKVAHQGCVNRIRA--MSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGHG 216
P L+L V H G +NR+R + + P + W++ G V+V+ R L + + + +A
Sbjct: 133 PQLELAMVPHYGGINRVRVSWLGEEP-VAGIWSEKGQVEVFALRRLLQVVDDPQALATFL 191
Query: 217 APQVLNQSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPF 276
+ P+ F GH EG+A+DW+P GRL++GDC IHLW P +W+VD PF
Sbjct: 192 RDEQARVKPIFTFAGHMGEGFALDWSPRVSGRLLTGDCQKNIHLWTPTDGGSWHVDQRPF 251
Query: 277 IGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSA---LMSFKAHNADVNVISWN 333
+GH SVEDLQWSPTE VFASCS D +I IWD R S L + AH+ DVNVI+W+
Sbjct: 252 MGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTTSAHDGDVNVINWS 311
Query: 334 RLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSAD 393
R LL SG DDG I DLR K G S VA F+ H P+TS+EW P + A S AD
Sbjct: 312 RREPFLL-SGGDDGALKIWDLRQFKSG-SPVATFKQHVAPITSVEWHPQDSGVFAASGAD 369
Query: 394 NQLTIWDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQKDLKELHWHTQVPGM 453
NQ+T WDL++ E DLP QLLF+HQG+ DLKELHWH Q PG+
Sbjct: 370 NQITQWDLAVERDPEAGDT------ETDPGLADLPQQLLFVHQGETDLKELHWHPQCPGV 423
Query: 454 IVSTAADGFNI 464
+VSTA GF +
Sbjct: 424 LVSTALSGFTV 434
Score = 171 (65.3 bits), Expect = 1.2e-85, Sum P(2) = 1.2e-85
Identities = 43/107 (40%), Positives = 55/107 (51%)
Query: 15 PKERTRTQKKGNGXXXXXIPSLPTKVWQPGVDK-LEEGEELQCDPTAYNSLHAFHIGWPC 73
P + RT + G S ++V+ PG L EGEEL D AY H G PC
Sbjct: 4 PNGKPRTCETGEPMEAESSGS--SQVYLPGRGPPLREGEELVMDEEAYVLYHRAQTGAPC 61
Query: 74 LSFDILRDTLGLVRNEFPYTAYFVAGSQAEKPSWNSIGVFKVSNISG 120
LSFDI+RD LG R E P T Y AG+QAE N + + ++ N+ G
Sbjct: 62 LSFDIIRDHLGDNRTELPLTLYLCAGTQAESAQSNRLMMLRMHNLHG 108
>MGI|MGI:2141989 [details] [associations]
symbol:Grwd1 "glutamate-rich WD repeat containing 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:2141989 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AC149053 CTD:83743
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730
HOVERGEN:HBG051847 KO:K14848 OMA:NRLMMLR EMBL:AB001539
EMBL:CH466603 EMBL:BC008121 IPI:IPI00123005 RefSeq:NP_700468.2
UniGene:Mm.274847 ProteinModelPortal:Q810D6 STRING:Q810D6
PhosphoSite:Q810D6 PaxDb:Q810D6 PRIDE:Q810D6
Ensembl:ENSMUST00000107723 Ensembl:ENSMUST00000131384 GeneID:101612
KEGG:mmu:101612 InParanoid:Q810D6 NextBio:355042 CleanEx:MM_GRWD1
Genevestigator:Q810D6 GermOnline:ENSMUSG00000053801 Uniprot:Q810D6
Length = 446
Score = 844 (302.2 bits), Expect = 2.7e-84, P = 2.7e-84
Identities = 189/458 (41%), Positives = 249/458 (54%)
Query: 16 KERTRTQKKGNGXXXXXI-PSL--PTKVWQPGVDK-LEEGEELQCDPTAYNSLHAFHIGW 71
K R+RT + G P P++V+ PG L EGEEL D AY H G
Sbjct: 5 KGRSRTCETGEPMEAETCDPGTEGPSQVYLPGRGPPLSEGEELVMDEEAYVLYHRAQTGA 64
Query: 72 PCLSFDILRDTLGLVRNEFPYTAYFVAGSQAEKPSWNSIGVFKVSNISGKRRELVPNKPA 131
PCLSFDI+RD LG R E P + Y AG+QAE N + + ++ N+ G R P+ P+
Sbjct: 65 PCLSFDIVRDHLGDNRTELPLSLYLCAGTQAESAQSNRLMMLRMHNLHGTR----PS-PS 119
Query: 132 TXXXXXXXXXXXXXXXXXXXXXXXXXTPILQLRKVAHQGCVNRIRA--MSQNPHICASWA 189
P L+L V H G +NR+R + + P + W+
Sbjct: 120 EGSDDDEEDEDEEDEEEQK--------PQLELAMVPHYGGINRVRVSWLGEEP-VAGVWS 170
Query: 190 DTGHVQVWDFRSHLNALAESETVAGHGAPQVLNQSPLVKFGGHKDEGYAIDWNPVAPGRL 249
+ G V+V+ R L + + + +A + P+ F GH EG+A+DW+P PGRL
Sbjct: 171 EKGQVEVFALRRLLQVVDDPQALAIFLRDEQARIKPIFSFAGHMGEGFALDWSPRVPGRL 230
Query: 250 VSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNIAIWD 309
++GDC +HLW P +WNVD PF+GH SVEDLQWSPTE VFASCS D +I IWD
Sbjct: 231 LTGDCQKNVHLWTPTEGGSWNVDQRPFVGHTRSVEDLQWSPTEDTVFASCSADASIRIWD 290
Query: 310 TRV--GKSALMSFK-AHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAH 366
R GK+ +++ AH+ DVNVISW+R LL SG DDG + DLR K G S VA
Sbjct: 291 IRAAPGKACMLTTATAHDGDVNVISWSRREPFLL-SGGDDGALKVWDLRQFKSG-SPVAT 348
Query: 367 FEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLSLXXXXXXXXXXXXXTREQVNAPED 426
F+ H PVTS+EW P + A S ADNQ+T WDL++ T + A
Sbjct: 349 FKQHMAPVTSVEWHPQDSGVFAASGADNQITQWDLAVERDPESGETE---TDPGLAA--- 402
Query: 427 LPPQLLFIHQGQKDLKELHWHTQVPGMIVSTAADGFNI 464
LP QLLF+HQG+ DLKELHWH Q PG+++STA GF +
Sbjct: 403 LPQQLLFVHQGETDLKELHWHPQCPGVLISTALSGFTV 440
>WB|WBGene00021899 [details] [associations]
symbol:Y54H5A.1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0009792 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730 KO:K14848
OMA:NRLMMLR EMBL:FO081201 RefSeq:NP_498091.1
ProteinModelPortal:Q9N393 SMR:Q9N393 DIP:DIP-26654N
MINT:MINT-1128766 STRING:Q9N393 PaxDb:Q9N393
EnsemblMetazoa:Y54H5A.1.1 EnsemblMetazoa:Y54H5A.1.2
EnsemblMetazoa:Y54H5A.1.3 GeneID:175701 KEGG:cel:CELE_Y54H5A.1
UCSC:Y54H5A.1.1 CTD:175701 WormBase:Y54H5A.1 InParanoid:Q9N393
NextBio:889274 Uniprot:Q9N393
Length = 453
Score = 806 (288.8 bits), Expect = 2.9e-80, P = 2.9e-80
Identities = 172/444 (38%), Positives = 242/444 (54%)
Query: 33 IPSLPTKVWQPGVDK-LEEGEELQCDPTAYNSLHAFHIGWPCLSFDILRDTLGLVRNEFP 91
+P + + PG+ + L++GEEL DP+AY H+F+ WPCLSFD+++D LG R +FP
Sbjct: 35 VPENQRQAYIPGLSRPLKKGEELDFDPSAYKLFHSFNSDWPCLSFDVVKDGLGENRTQFP 94
Query: 92 YTAYFVAGSQAEKPSWNSIGVFKVSNISGKRRELVPNKPATXXXXXXXXXXXXXXXXXXX 151
Y V+G+QA+KP N I V + N++ R+E NK
Sbjct: 95 AECYIVSGTQADKPRDNEIIVMGLKNLTTMRKEK-ENK------GDDSDTSEDESEDEDA 147
Query: 152 XXXXXXTPILQLRKVAHQGCVNRIRA-MSQNPHICASWADTGHVQVWDFRSHLNALAESE 210
P + + H G +NRIR+ + +CA W+D G VQVW+ LN +
Sbjct: 148 EEEKKREPKMHAVSIPHYGGINRIRSDRLGDSTVCACWSDQGRVQVWNITDALNY---TH 204
Query: 211 TVAGHGAPQVLN-QSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATW 269
++G +V PL G EGY + W+ + G L +GD I+LW+ W
Sbjct: 205 GMSGESKTEVQKIDRPLFTNNGSGKEGYGLAWSSLKTGDLATGDIIKKIYLWQMKEGGQW 264
Query: 270 NVDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVG-KSALMSF--KAHNAD 326
V NP GH SVEDL WSPTE+ + ASCS DG+I +WDTR K A + KAH +D
Sbjct: 265 AVGANPLTGHKKSVEDLAWSPTETGLLASCSADGSIKLWDTRSAPKDACVCTVQKAHESD 324
Query: 327 VNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGST 386
VNVISWNR + L+ SG DDG I L+ ++ G V A F+YH P+TS++W PHE +T
Sbjct: 325 VNVISWNRHEN-LIVSGGDDGELKIWSLKTIQFGQPV-ALFKYHNSPITSVDWHPHETTT 382
Query: 387 LAVSSADNQLTIWDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQKDLKELHW 446
S D+Q TIWD++ Q N E +PPQL+F+H GQ ++KE+HW
Sbjct: 383 FMASGEDDQTTIWDIATEADG------------QTNI-EGVPPQLMFVHMGQNEVKEVHW 429
Query: 447 HTQVPGMIVSTAADGFNILMPSNI 470
H Q+PG+ ++T+ DGFN+ NI
Sbjct: 430 HQQIPGLAINTSIDGFNVFKTINI 453
>POMBASE|SPBC1711.07 [details] [associations]
symbol:SPBC1711.07 "WD repeat protein Rrb1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=ISS] [GO:0043234
"protein complex" evidence=NAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1711.07 GO:GO:0005829
GO:GO:0043234 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319
GenomeReviews:CU329671_GR GO:GO:0042254 GO:GO:0006364
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000036730 KO:K14848
OMA:NRLMMLR RefSeq:NP_595880.1 ProteinModelPortal:Q9P783
STRING:Q9P783 EnsemblFungi:SPBC1711.07.1 GeneID:2539693
KEGG:spo:SPBC1711.07 OrthoDB:EOG4XWK6B NextBio:20800846
Uniprot:Q9P783
Length = 480
Score = 642 (231.1 bits), Expect = 1.5e-79, Sum P(2) = 1.5e-79
Identities = 134/316 (42%), Positives = 187/316 (59%)
Query: 159 PILQLRKVAHQGCVNRIR-----AMSQNPHICASWADTGHVQVWDFRSHLNALAESETVA 213
PIL+ + ++ +G NR+R A S + AS+ +TG V +WD HL +L +
Sbjct: 172 PILEHKSISTKGACNRVRSARRPANSSKESLLASFHETGKVHIWDIAPHLRSLDSPGVMV 231
Query: 214 GHGAPQVLNQSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDP 273
SPL HK EGYA+DW+P L+SGD + I L + S+ W D
Sbjct: 232 SRK-----ENSPLYTVNRHKTEGYALDWSPFEYS-LLSGDNANEIFLTK-YSNGGWQTDS 284
Query: 274 NPFIGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTR-VGKSALMSFKAH-NADVNVIS 331
+PF+ H A+VEDLQWSP+E +VF+SCS DG IWD R K++ ++ AH DVNV+S
Sbjct: 285 SPFLSHTAAVEDLQWSPSEKNVFSSCSCDGTFRIWDVRNKQKTSALTVNAHPGVDVNVLS 344
Query: 332 WNRLASCLLASGSDDGTFSIHDLRLLKGGDSV---VAHFEYHKHPVTSIEWSPHEGSTLA 388
WN LLA+G+D+G +S+ DLR LK SV VA F++H+ P+ SIEW P+E S +
Sbjct: 345 WNTRVPNLLATGADNGVWSVWDLRSLKSSSSVATPVASFKWHRAPIYSIEWHPNEDSVIG 404
Query: 389 VSSADNQLTIWDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQKDLKELHWHT 448
V ADNQ+++WDLS+ +D+PPQL+FIH GQ+++KE+HWH
Sbjct: 405 VVGADNQISLWDLSVELDEEEQDSRAA------EGLQDVPPQLMFIHMGQQEIKEMHWHR 458
Query: 449 QVPGMIVSTAADGFNI 464
Q+PG IVSTA G N+
Sbjct: 459 QIPGTIVSTAMTGINV 474
Score = 176 (67.0 bits), Expect = 1.5e-79, Sum P(2) = 1.5e-79
Identities = 36/83 (43%), Positives = 50/83 (60%)
Query: 37 PTKV-WQPGVDKLEEGEELQCDPTAYNSLHAFHIGWPCLSFDILRDTLGLVRNEFPYTAY 95
P+K+ W PG K+ E+L DP+ Y LH + WP LSFDIL+D+LG R +P+ Y
Sbjct: 70 PSKIPWLPG-GKINADEKLVADPSVYEMLHNIQVKWPFLSFDILQDSLGEERRAWPHQMY 128
Query: 96 FVAGSQAEKPSWNSIGVFKVSNI 118
V GSQA + N + V K+S +
Sbjct: 129 LVGGSQALDSNDNELTVMKLSQL 151
>ASPGD|ASPL0000069856 [details] [associations]
symbol:AN7205 species:162425 "Emericella nidulans"
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001304 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000036730 OMA:NRLMMLR
EnsemblFungi:CADANIAT00000249 Uniprot:C8VD17
Length = 492
Score = 677 (243.4 bits), Expect = 1.3e-66, P = 1.3e-66
Identities = 163/434 (37%), Positives = 229/434 (52%)
Query: 43 PGVDKLEEGEELQCDPTAYNSLHAFHIGWPCLSFDILRDTLGLVRNEFPYTAYFVAGSQA 102
PG KL GE L DP+ Y+ LH WPCLSFDI+RDTLG R +P T Y V G+QA
Sbjct: 78 PGRTKLAPGEVLSPDPSTYDMLHTLSTPWPCLSFDIVRDTLGDNRKTYPATVYAVTGTQA 137
Query: 103 E--KPSWNSIGVFKVSNISGKRRELVPNKPATXXXXXXXXXXXXXXXXXXXXXXXXXTPI 160
E + N + V K+S + RE N+ +
Sbjct: 138 EGRRAKENELMVLKLSGLGKMERE---NETDSESDSDDDEGGEAILEHKSIPLGSTAN-- 192
Query: 161 LQLRKVAHQGCVNRIRAMSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGHGAPQV 220
++R AHQ + I Q I A+ + V + D HL + V G P
Sbjct: 193 -RIR--AHQTPQSDITKPPQT--ITATMLENSQVVIHDVTPHLTSF----DVPGTMLPPS 243
Query: 221 LNQSPLVKFGGHKDEGYAIDWNPVAP-GRLVSGDCNSCIHLWEPASDATWNVDPNPFIGH 279
++ PL HK EGYA+DW+P+ P G+L++GD + I++ W D F GH
Sbjct: 244 ASK-PLSTLRMHKSEGYALDWSPLHPLGKLLTGDNDGLIYVTTRTEGGGWVTDTRAFRGH 302
Query: 280 AASVEDLQWSPTESDVFASCSVDGNIAIWDTRV-GKSALMSFKAHNADVNVISWNRLASC 338
A+SVE+LQWSP E +VFAS S DG + +WD R +S ++ K N DVNV++W++ S
Sbjct: 303 ASSVEELQWSPNEKNVFASASSDGTVKVWDVRSKSRSPAVNVKISNTDVNVMTWSKQTSH 362
Query: 339 LLASGSDDGTFSIHDLRLLKGGDSV--------VAHFEYHKHPVTSIEWSPHEGSTLAVS 390
LLA+G+DDG +++ DLR K S VA F +HK P+TSIEW P + S +AV
Sbjct: 363 LLATGADDGQWAVWDLRHWKPNPSSSAPITASPVASFNFHKEPITSIEWHPTDDSVIAVG 422
Query: 391 SADNQLTIWDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQKDLKELHWHTQV 450
SADN +T+WDL++ +RE A D+PPQLLF+H + +KE+HW Q+
Sbjct: 423 SADNTVTLWDLAVELDEEE-------SREAGLA--DVPPQLLFVHY-MESVKEVHWQAQM 472
Query: 451 PGMIVSTAADGFNI 464
PG +++T + GF +
Sbjct: 473 PGTLMATGSGGFGV 486
>CGD|CAL0001341 [details] [associations]
symbol:orf19.6355 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0001341 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AACQ01000192 EMBL:AACQ01000189
InterPro:IPR022052 Pfam:PF12265 KO:K14848 RefSeq:XP_711573.1
RefSeq:XP_711642.1 ProteinModelPortal:Q59PD8 STRING:Q59PD8
GeneID:3646750 GeneID:3646833 KEGG:cal:CaO19.13712
KEGG:cal:CaO19.6355 eggNOG:NOG254774 Uniprot:Q59PD8
Length = 517
Score = 636 (228.9 bits), Expect = 3.0e-62, P = 3.0e-62
Identities = 154/439 (35%), Positives = 230/439 (52%)
Query: 38 TKVWQPGVDK-LEEGEELQCDPTAYNSLHAFHIGWPCLSFDILRDTLGLVRNEFPYTAYF 96
+ ++ P K L E L+ DPT Y LH ++ WPCL+ DIL D+LG R +P T Y
Sbjct: 99 SSIYLPHKSKPLGPDEVLEADPTVYEMLHNINLPWPCLTVDILSDSLGNERRSYPATVYL 158
Query: 97 VAGSQAEKPSWNSIGVFKVSNISGKRRELVPNKPATXXXXXXXXXXXXXXXXXXXXXXXX 156
+QA K N + K S+++ + LV ++
Sbjct: 159 ATATQAAKAKDNELLAMKASSLA---KTLVKDE------------NEEDEEDEDDDDDVD 203
Query: 157 XTPILQLRKVAHQGCVNRIR----AMSQNPHICASWADTGHVQVWDFRSHLNALAESETV 212
PIL + + NRIR A ++ AS ++ G V ++D + A +T
Sbjct: 204 SDPILDSESIPLRHTTNRIRVSPHAQQTGEYLTASMSENGEVYIFDLSAQYKAF---DT- 259
Query: 213 AGHGAPQVLNQSPLVKFGGHKD-EGYAIDWNP-VAPGRLVSGDCNSCIHLWEPASDATWN 270
G+ P+ ++ P+ H + EGY +DW+P V G L+SGD + I+L + ++W
Sbjct: 260 PGYMIPKS-SKRPIHTIRAHGNVEGYGLDWSPLVNTGALLSGDMSGRIYLTNRTT-SSWT 317
Query: 271 VDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGK-SALMSFKAHNADVNV 329
D PF +S+ED+QWS E+ VFA+ DG I IWDTR K +S A +DVNV
Sbjct: 318 TDKTPFFASQSSIEDIQWSTGETTVFATGGCDGYIRIWDTRSKKHKPALSVIASKSDVNV 377
Query: 330 ISWNRLASCLLASGSDDGTFSIHDLRLLKGGD----SVVAHFEYHKHPVTSIEWSPHEGS 385
ISW+ + LLASG DDG++ + DLR S VA++++HK P+TSI ++P + S
Sbjct: 378 ISWSSKINHLLASGHDDGSWGVWDLRNFTNNTTSNPSPVANYDFHKSPITSISFNPLDES 437
Query: 386 TLAVSSADNQLTIWDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQKDLKELH 445
+AVSS DN +T+WDL++ R++ D+PPQLLF+H Q+D+K++
Sbjct: 438 IIAVSSEDNTVTLWDLAVEADDEEISQQ----RKEAQELHDIPPQLLFVHW-QRDVKDVR 492
Query: 446 WHTQVPGMIVSTAADGFNI 464
WH Q+PG +VST DG NI
Sbjct: 493 WHPQIPGCLVSTGGDGLNI 511
>UNIPROTKB|Q59PD8 [details] [associations]
symbol:RRB1 "Likely nucleolar ribosome biogenesis factor
Rrb1p" species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0001341 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AACQ01000192 EMBL:AACQ01000189
InterPro:IPR022052 Pfam:PF12265 KO:K14848 RefSeq:XP_711573.1
RefSeq:XP_711642.1 ProteinModelPortal:Q59PD8 STRING:Q59PD8
GeneID:3646750 GeneID:3646833 KEGG:cal:CaO19.13712
KEGG:cal:CaO19.6355 eggNOG:NOG254774 Uniprot:Q59PD8
Length = 517
Score = 636 (228.9 bits), Expect = 3.0e-62, P = 3.0e-62
Identities = 154/439 (35%), Positives = 230/439 (52%)
Query: 38 TKVWQPGVDK-LEEGEELQCDPTAYNSLHAFHIGWPCLSFDILRDTLGLVRNEFPYTAYF 96
+ ++ P K L E L+ DPT Y LH ++ WPCL+ DIL D+LG R +P T Y
Sbjct: 99 SSIYLPHKSKPLGPDEVLEADPTVYEMLHNINLPWPCLTVDILSDSLGNERRSYPATVYL 158
Query: 97 VAGSQAEKPSWNSIGVFKVSNISGKRRELVPNKPATXXXXXXXXXXXXXXXXXXXXXXXX 156
+QA K N + K S+++ + LV ++
Sbjct: 159 ATATQAAKAKDNELLAMKASSLA---KTLVKDE------------NEEDEEDEDDDDDVD 203
Query: 157 XTPILQLRKVAHQGCVNRIR----AMSQNPHICASWADTGHVQVWDFRSHLNALAESETV 212
PIL + + NRIR A ++ AS ++ G V ++D + A +T
Sbjct: 204 SDPILDSESIPLRHTTNRIRVSPHAQQTGEYLTASMSENGEVYIFDLSAQYKAF---DT- 259
Query: 213 AGHGAPQVLNQSPLVKFGGHKD-EGYAIDWNP-VAPGRLVSGDCNSCIHLWEPASDATWN 270
G+ P+ ++ P+ H + EGY +DW+P V G L+SGD + I+L + ++W
Sbjct: 260 PGYMIPKS-SKRPIHTIRAHGNVEGYGLDWSPLVNTGALLSGDMSGRIYLTNRTT-SSWT 317
Query: 271 VDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGK-SALMSFKAHNADVNV 329
D PF +S+ED+QWS E+ VFA+ DG I IWDTR K +S A +DVNV
Sbjct: 318 TDKTPFFASQSSIEDIQWSTGETTVFATGGCDGYIRIWDTRSKKHKPALSVIASKSDVNV 377
Query: 330 ISWNRLASCLLASGSDDGTFSIHDLRLLKGGD----SVVAHFEYHKHPVTSIEWSPHEGS 385
ISW+ + LLASG DDG++ + DLR S VA++++HK P+TSI ++P + S
Sbjct: 378 ISWSSKINHLLASGHDDGSWGVWDLRNFTNNTTSNPSPVANYDFHKSPITSISFNPLDES 437
Query: 386 TLAVSSADNQLTIWDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQKDLKELH 445
+AVSS DN +T+WDL++ R++ D+PPQLLF+H Q+D+K++
Sbjct: 438 IIAVSSEDNTVTLWDLAVEADDEEISQQ----RKEAQELHDIPPQLLFVHW-QRDVKDVR 492
Query: 446 WHTQVPGMIVSTAADGFNI 464
WH Q+PG +VST DG NI
Sbjct: 493 WHPQIPGCLVSTGGDGLNI 511
>SGD|S000004738 [details] [associations]
symbol:RRB1 "Nuclear protein involved in early steps of
ribosome biogenesis" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0042254
"ribosome biogenesis" evidence=IEA;IMP;IPI] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000004738 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0042254 EMBL:BK006946
GO:GO:0006364 InterPro:IPR022052 Pfam:PF12265 EMBL:Z48622
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730 KO:K14848
OMA:NRLMMLR OrthoDB:EOG4XWK6B PIR:S53061 RefSeq:NP_013850.1
ProteinModelPortal:Q04225 SMR:Q04225 DIP:DIP-6263N IntAct:Q04225
MINT:MINT-1168783 STRING:Q04225 PaxDb:Q04225 PeptideAtlas:Q04225
EnsemblFungi:YMR131C GeneID:855161 KEGG:sce:YMR131C CYGD:YMR131c
NextBio:978584 Genevestigator:Q04225 GermOnline:YMR131C
Uniprot:Q04225
Length = 511
Score = 607 (218.7 bits), Expect = 3.5e-59, P = 3.5e-59
Identities = 144/439 (32%), Positives = 231/439 (52%)
Query: 39 KVWQPGVDK-LEEGEELQCDPTAYNSLHAFHIGWPCLSFDILRDTLGLVRNEFPYTAYFV 97
+++ P + + L E L+ DPT Y LH ++ WPCL+ D++ DTLG R +P +
Sbjct: 95 ELYLPHMSRPLGPDEVLEADPTVYEMLHNVNMPWPCLTLDVIPDTLGSERRNYPQSILLT 154
Query: 98 AGSQAEKPSWNSIGVFKVSNISGKRRELVPNKPATXXXXXXXXXXXXXXXXXXXXXXXXX 157
+Q+ + N + V +SN++ + L+ +
Sbjct: 155 TATQSSRKKENELMVLALSNLA---KTLLKDD--------------NEGEDDEEDDEDDV 197
Query: 158 TPILQLRKVAHQGCVNRIR----AMSQNPHICASWADTGHVQVWDFRSHLNALAESETVA 213
P+++ + + NR++ A+S + A+ ++ G V +++ A +
Sbjct: 198 DPVIENENIPLRDTTNRLKVSPFAISNQEVLTATMSENGDVYIYNLAPQSKAFS----TP 253
Query: 214 GHGAPQVLNQSPLVKFGGHKD-EGYAIDWNP-VAPGRLVSGDCNSCIHLWEPASDATWNV 271
G+ P+ + P+ H + EGY +DW+P + G L+SGDC+ I+ + + + W
Sbjct: 254 GYQIPKSAKR-PIHTVKNHGNVEGYGLDWSPLIKTGALLSGDCSGQIYFTQRHT-SRWVT 311
Query: 272 DPNPF-IGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGK-SALMSFKAHNADVNV 329
D PF + + S+ED+QWS TES VFA+ DG I IWDTR K +S KA N DVNV
Sbjct: 312 DKQPFTVSNNKSIEDIQWSRTESTVFATAGCDGYIRIWDTRSKKHKPAISVKASNTDVNV 371
Query: 330 ISWNRLASCLLASGSDDGTFSIHDLRLL--KGGDSV--VAHFEYHKHPVTSIEWSPHEGS 385
ISW+ LLASG D+GT+ + DLR D+V VA +++HK +TSI ++P + S
Sbjct: 372 ISWSDKIGYLLASGDDNGTWGVWDLRQFTPSNADAVQPVAQYDFHKGAITSIAFNPLDES 431
Query: 386 TLAVSSADNQLTIWDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQKDLKELH 445
+AV S DN +T+WDLS+ T+E +++PPQLLF+H QK++K++
Sbjct: 432 IVAVGSEDNTVTLWDLSVEADDEEIKQQAAETKEL----QEIPPQLLFVHW-QKEVKDVK 486
Query: 446 WHTQVPGMIVSTAADGFNI 464
WH Q+PG +VST DG N+
Sbjct: 487 WHKQIPGCLVSTGTDGLNV 505
>ZFIN|ZDB-GENE-030131-848 [details] [associations]
symbol:rbb4l "retinoblastoma binding protein 4,
like" species:7955 "Danio rerio" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-030131-848 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000160330 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC052110 EMBL:BC067546 IPI:IPI00996854
RefSeq:NP_997775.1 UniGene:Dr.75908 ProteinModelPortal:Q7ZTY4
SMR:Q7ZTY4 STRING:Q7ZTY4 PRIDE:Q7ZTY4 Ensembl:ENSDART00000008144
GeneID:322129 KEGG:dre:322129 CTD:322129 NextBio:20807686
ArrayExpress:Q7ZTY4 Bgee:Q7ZTY4 Uniprot:Q7ZTY4
Length = 426
Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
Identities = 106/308 (34%), Positives = 150/308 (48%)
Query: 165 KVAHQGCVNRIRAMSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGHGAPQVLNQS 224
K+ H+G VNR R M QNP I A+ T V +D+ H +G + S
Sbjct: 120 KINHEGEVNRARYMPQNPCIIATKTPTSDVLAFDYTKH----PSKPDPSG-------DCS 168
Query: 225 PLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWN--VDPNP-FIGHAA 281
P ++ GH+ EGY + WNP G L+S + I LW+ + VD F GH A
Sbjct: 169 PDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISGAPKEGKIVDAKTIFTGHTA 228
Query: 282 SVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFK--AHNADVNVISWNRLASCL 339
VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N + +
Sbjct: 229 VVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFI 288
Query: 340 LASGSDDGTFSIHDLRLLKGGDSVVAH-FEYHKHPVTSIEWSPHEGSTLAVSSADNQLTI 398
LA+GS D T ++ DLR LK + H FE HK + ++WSPH + LA S D +L +
Sbjct: 289 LATGSADKTVALWDLRNLK----LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNV 344
Query: 399 WDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQK-DLKELHWHTQVPGMIVST 457
WDLS + ED PP+LLFIH G + + W+ P +I S
Sbjct: 345 WDLS-----------KIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSV 393
Query: 458 AADGFNIL 465
+ D NI+
Sbjct: 394 SED--NIM 399
Score = 145 (56.1 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 42/185 (22%), Positives = 79/185 (42%)
Query: 229 FGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFI-GHAASVEDLQ 287
F GH + W+ + S + + +W+ S+ T P+ + H A V L
Sbjct: 223 FTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSK--PSHSVDAHTAEVNCLS 280
Query: 288 WSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDG 347
++P + A+ S D +A+WD R K L SF++H ++ + W+ +LAS D
Sbjct: 281 FNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDR 340
Query: 348 TFSIHDLRLL----------KGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLT 397
++ DL + G ++ H ++ W+P+E + S DN +
Sbjct: 341 RLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 400
Query: 398 IWDLS 402
+W ++
Sbjct: 401 VWQMA 405
>UNIPROTKB|O93377 [details] [associations]
symbol:rbbp4-a "Histone-binding protein RBBP4-A"
species:8355 "Xenopus laevis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOVERGEN:HBG053236 EMBL:AF073787
EMBL:BC077257 RefSeq:NP_001083811.1 UniGene:Xl.537
ProteinModelPortal:O93377 SMR:O93377 PRIDE:O93377 GeneID:399131
KEGG:xla:399131 CTD:399131 Xenbase:XB-GENE-482006 Uniprot:O93377
Length = 425
Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
Identities = 106/308 (34%), Positives = 149/308 (48%)
Query: 165 KVAHQGCVNRIRAMSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGHGAPQVLNQS 224
K+ H G VNR R M QNP I A+ T V V+D+ H +G P +
Sbjct: 120 KITHDGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKH----PSKPDPSGECNPNL---- 171
Query: 225 PLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWN--VDPNP-FIGHAA 281
+ GH+ EGY + WNP G L+S + I LW+ ++ VD F GH A
Sbjct: 172 ---RLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTA 228
Query: 282 SVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFK--AHNADVNVISWNRLASCL 339
VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N + +
Sbjct: 229 VVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFI 288
Query: 340 LASGSDDGTFSIHDLRLLKGGDSVVAH-FEYHKHPVTSIEWSPHEGSTLAVSSADNQLTI 398
LA+GS D T ++ DLR LK + H FE HK + ++WSPH + LA S D +L +
Sbjct: 289 LATGSADKTVALWDLRNLK----LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNV 344
Query: 399 WDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQK-DLKELHWHTQVPGMIVST 457
WDLS + ED PP+LLFIH G + + W+ P +I S
Sbjct: 345 WDLS-----------KIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSV 393
Query: 458 AADGFNIL 465
+ D NI+
Sbjct: 394 SED--NIM 399
Score = 145 (56.1 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 42/185 (22%), Positives = 79/185 (42%)
Query: 229 FGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFI-GHAASVEDLQ 287
F GH + W+ + S + + +W+ S+ T P+ + H A V L
Sbjct: 223 FTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSK--PSHSVDAHTAEVNCLS 280
Query: 288 WSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDG 347
++P + A+ S D +A+WD R K L SF++H ++ + W+ +LAS D
Sbjct: 281 FNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDR 340
Query: 348 TFSIHDLRLL----------KGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLT 397
++ DL + G ++ H ++ W+P+E + S DN +
Sbjct: 341 RLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 400
Query: 398 IWDLS 402
+W ++
Sbjct: 401 VWQMA 405
>UNIPROTKB|Q9W7I5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0033186
"CAF-1 complex" evidence=ISS] [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 CTD:5928
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:AF097750 IPI:IPI00592914
RefSeq:NP_990183.1 UniGene:Gga.1029 ProteinModelPortal:Q9W7I5
SMR:Q9W7I5 STRING:Q9W7I5 PRIDE:Q9W7I5 GeneID:395658 KEGG:gga:395658
InParanoid:Q9W7I5 NextBio:20815730 Uniprot:Q9W7I5
Length = 425
Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
Identities = 106/320 (33%), Positives = 153/320 (47%)
Query: 165 KVAHQGCVNRIRAMSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGHGAPQVLNQS 224
K+ H+G VNR R M QNP I A+ + V V+D+ H +G P +
Sbjct: 120 KINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKH----PSKPDPSGECNPDL---- 171
Query: 225 PLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWN--VDPNP-FIGHAA 281
+ GH+ EGY + WNP G L+S + I LW+ ++ VD F GH A
Sbjct: 172 ---RLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTA 228
Query: 282 SVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFK--AHNADVNVISWNRLASCL 339
VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N + +
Sbjct: 229 VVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFI 288
Query: 340 LASGSDDGTFSIHDLRLLKGGDSVVAH-FEYHKHPVTSIEWSPHEGSTLAVSSADNQLTI 398
LA+GS D T ++ DLR LK + H FE HK + ++WSPH + LA S D +L +
Sbjct: 289 LATGSADKTVALWDLRNLK----LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNV 344
Query: 399 WDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQK-DLKELHWHTQVPGMIVST 457
WDLS + ED PP+LLFIH G + + W+ P +I S
Sbjct: 345 WDLS-----------KIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSV 393
Query: 458 AADGFNILMPSNIQSTLPQD 477
+ D NI+ + + D
Sbjct: 394 SED--NIMQVWQMAENINND 411
>UNIPROTKB|F2Z4M0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016589 "NURF complex"
evidence=IEA] [GO:0031497 "chromatin assembly" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0035098 "ESC/E(Z)
complex" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 IPI:IPI00592914
EMBL:AADN02043764 ProteinModelPortal:F2Z4M0 SMR:F2Z4M0 PRIDE:F2Z4M0
Ensembl:ENSGALT00000005575 Uniprot:F2Z4M0
Length = 425
Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 105/308 (34%), Positives = 150/308 (48%)
Query: 165 KVAHQGCVNRIRAMSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGHGAPQVLNQS 224
K+ H+G VNR R M QNP I A+ + V V+D+ H +G P +
Sbjct: 120 KINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKH----PSKPDPSGECNPDL---- 171
Query: 225 PLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWN--VDPNP-FIGHAA 281
+ GH+ EGY + WNP G L+S + I LW+ ++ VD F GH A
Sbjct: 172 ---RLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTA 228
Query: 282 SVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFK--AHNADVNVISWNRLASCL 339
VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N + +
Sbjct: 229 VVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFI 288
Query: 340 LASGSDDGTFSIHDLRLLKGGDSVVAH-FEYHKHPVTSIEWSPHEGSTLAVSSADNQLTI 398
LA+GS D T ++ DLR LK + H FE HK + ++WSPH + LA S D +L +
Sbjct: 289 LATGSADKTVALWDLRNLK----LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNV 344
Query: 399 WDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQK-DLKELHWHTQVPGMIVST 457
WDLS + ED PP+LLFIH G + + W+ P +I S
Sbjct: 345 WDLS-----------KIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSV 393
Query: 458 AADGFNIL 465
+ D NI+
Sbjct: 394 SED--NIM 399
Score = 147 (56.8 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 49/228 (21%), Positives = 94/228 (41%)
Query: 192 GHVQVWD--FRSHLNALAESETVAGHGAPQVLNQSPLVK----FGGHKDEGYAIDWNPVA 245
G+ W+ HL + ++ T+ V + +V F GH + W+ +
Sbjct: 180 GYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLH 239
Query: 246 PGRLVSGDCNSCIHLWEPASDATWNVDPNPFI-GHAASVEDLQWSPTESDVFASCSVDGN 304
S + + +W+ S+ T P+ + H A V L ++P + A+ S D
Sbjct: 240 ESLFGSVADDQKLMIWDTRSNNTSK--PSHSVDAHTAEVNCLSFNPYSEFILATGSADKT 297
Query: 305 IAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLL------- 357
+A+WD R K L SF++H ++ + W+ +LAS D ++ DL +
Sbjct: 298 VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPE 357
Query: 358 ---KGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLS 402
G ++ H ++ W+P+E + S DN + +W ++
Sbjct: 358 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMA 405
>UNIPROTKB|Q3MHL3 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9913
"Bos taurus" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0006338 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
OMA:CQPDLRL GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0008094 HOGENOM:HOG000160330 EMBL:BT030530 EMBL:BC105195
IPI:IPI00717704 RefSeq:NP_001070481.1 UniGene:Bt.101874
ProteinModelPortal:Q3MHL3 SMR:Q3MHL3 STRING:Q3MHL3 PRIDE:Q3MHL3
Ensembl:ENSBTAT00000007758 GeneID:767940 KEGG:bta:767940 CTD:5928
HOVERGEN:HBG053236 InParanoid:Q3MHL3 OrthoDB:EOG4DBTDH
NextBio:20918297 Uniprot:Q3MHL3
Length = 425
Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 105/308 (34%), Positives = 150/308 (48%)
Query: 165 KVAHQGCVNRIRAMSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGHGAPQVLNQS 224
K+ H+G VNR R M QNP I A+ + V V+D+ H +G P +
Sbjct: 120 KINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKH----PSKPDPSGECNPDL---- 171
Query: 225 PLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWN--VDPNP-FIGHAA 281
+ GH+ EGY + WNP G L+S + I LW+ ++ VD F GH A
Sbjct: 172 ---RLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTA 228
Query: 282 SVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFK--AHNADVNVISWNRLASCL 339
VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N + +
Sbjct: 229 VVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFI 288
Query: 340 LASGSDDGTFSIHDLRLLKGGDSVVAH-FEYHKHPVTSIEWSPHEGSTLAVSSADNQLTI 398
LA+GS D T ++ DLR LK + H FE HK + ++WSPH + LA S D +L +
Sbjct: 289 LATGSADKTVALWDLRNLK----LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNV 344
Query: 399 WDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQK-DLKELHWHTQVPGMIVST 457
WDLS + ED PP+LLFIH G + + W+ P +I S
Sbjct: 345 WDLS-----------KIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSV 393
Query: 458 AADGFNIL 465
+ D NI+
Sbjct: 394 SED--NIM 399
Score = 147 (56.8 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 49/228 (21%), Positives = 94/228 (41%)
Query: 192 GHVQVWD--FRSHLNALAESETVAGHGAPQVLNQSPLVK----FGGHKDEGYAIDWNPVA 245
G+ W+ HL + ++ T+ V + +V F GH + W+ +
Sbjct: 180 GYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLH 239
Query: 246 PGRLVSGDCNSCIHLWEPASDATWNVDPNPFI-GHAASVEDLQWSPTESDVFASCSVDGN 304
S + + +W+ S+ T P+ + H A V L ++P + A+ S D
Sbjct: 240 ESLFGSVADDQKLMIWDTRSNNTSK--PSHSVDAHTAEVNCLSFNPYSEFILATGSADKT 297
Query: 305 IAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLL------- 357
+A+WD R K L SF++H ++ + W+ +LAS D ++ DL +
Sbjct: 298 VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPE 357
Query: 358 ---KGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLS 402
G ++ H ++ W+P+E + S DN + +W ++
Sbjct: 358 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMA 405
>UNIPROTKB|E2QXR8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0031497 "chromatin
assembly" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 CTD:5928
EMBL:AAEX03001654 RefSeq:XP_864445.1 ProteinModelPortal:E2QXR8
SMR:E2QXR8 PRIDE:E2QXR8 Ensembl:ENSCAFT00000016755 GeneID:478149
KEGG:cfa:478149 NextBio:20853518 Uniprot:E2QXR8
Length = 425
Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 105/308 (34%), Positives = 150/308 (48%)
Query: 165 KVAHQGCVNRIRAMSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGHGAPQVLNQS 224
K+ H+G VNR R M QNP I A+ + V V+D+ H +G P +
Sbjct: 120 KINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKH----PSKPDPSGECNPDL---- 171
Query: 225 PLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWN--VDPNP-FIGHAA 281
+ GH+ EGY + WNP G L+S + I LW+ ++ VD F GH A
Sbjct: 172 ---RLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTA 228
Query: 282 SVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFK--AHNADVNVISWNRLASCL 339
VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N + +
Sbjct: 229 VVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFI 288
Query: 340 LASGSDDGTFSIHDLRLLKGGDSVVAH-FEYHKHPVTSIEWSPHEGSTLAVSSADNQLTI 398
LA+GS D T ++ DLR LK + H FE HK + ++WSPH + LA S D +L +
Sbjct: 289 LATGSADKTVALWDLRNLK----LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNV 344
Query: 399 WDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQK-DLKELHWHTQVPGMIVST 457
WDLS + ED PP+LLFIH G + + W+ P +I S
Sbjct: 345 WDLS-----------KIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSV 393
Query: 458 AADGFNIL 465
+ D NI+
Sbjct: 394 SED--NIM 399
Score = 147 (56.8 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 49/228 (21%), Positives = 94/228 (41%)
Query: 192 GHVQVWD--FRSHLNALAESETVAGHGAPQVLNQSPLVK----FGGHKDEGYAIDWNPVA 245
G+ W+ HL + ++ T+ V + +V F GH + W+ +
Sbjct: 180 GYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLH 239
Query: 246 PGRLVSGDCNSCIHLWEPASDATWNVDPNPFI-GHAASVEDLQWSPTESDVFASCSVDGN 304
S + + +W+ S+ T P+ + H A V L ++P + A+ S D
Sbjct: 240 ESLFGSVADDQKLMIWDTRSNNTSK--PSHSVDAHTAEVNCLSFNPYSEFILATGSADKT 297
Query: 305 IAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLL------- 357
+A+WD R K L SF++H ++ + W+ +LAS D ++ DL +
Sbjct: 298 VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPE 357
Query: 358 ---KGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLS 402
G ++ H ++ W+P+E + S DN + +W ++
Sbjct: 358 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMA 405
>UNIPROTKB|Q09028 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=NAS;IDA] [GO:0016589 "NURF
complex" evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0033186 "CAF-1 complex" evidence=IDA] [GO:0031497 "chromatin
assembly" evidence=IDA] [GO:0008285 "negative regulation of cell
proliferation" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IDA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IDA] [GO:0000278 "mitotic
cell cycle" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006334 "nucleosome assembly" evidence=TAS] [GO:0034080 "CENP-A
containing nucleosome assembly at centromere" evidence=TAS]
[GO:0016580 "Sin3 complex" evidence=NAS] [GO:0042393 "histone
binding" evidence=NAS] [GO:0042826 "histone deacetylase binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Pathway_Interaction_DB:telomerasepathway
Reactome:REACT_115566 GO:GO:0008285 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH471059 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035098
GO:GO:0042393 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0000278
GO:GO:0016589 GO:GO:0033186 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0016580 PDB:2XU7 PDBsum:2XU7
CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:X74262
EMBL:X71810 EMBL:BT007309 EMBL:AK299251 EMBL:AK312571 EMBL:AK222779
EMBL:AC114489 EMBL:BC003092 EMBL:BC015123 EMBL:BC053904
EMBL:BC075836 IPI:IPI00328319 IPI:IPI00645329 IPI:IPI00877802
IPI:IPI00877934 PIR:S36112 RefSeq:NP_001128727.1
RefSeq:NP_001128728.1 RefSeq:NP_005601.1 UniGene:Hs.16003 PDB:3GFC
PDBsum:3GFC ProteinModelPortal:Q09028 SMR:Q09028 DIP:DIP-33495N
IntAct:Q09028 MINT:MINT-90543 STRING:Q09028 PhosphoSite:Q09028
DMDM:1172846 PaxDb:Q09028 PRIDE:Q09028 DNASU:5928
Ensembl:ENST00000373485 Ensembl:ENST00000373493
Ensembl:ENST00000414241 Ensembl:ENST00000458695 GeneID:5928
KEGG:hsa:5928 UCSC:uc001bvr.3 UCSC:uc001bvs.3 GeneCards:GC01P033116
HGNC:HGNC:9887 HPA:CAB006264 MIM:602923 neXtProt:NX_Q09028
PharmGKB:PA34251 InParanoid:Q09028 PhylomeDB:Q09028 ChiTaRS:RBBP4
EvolutionaryTrace:Q09028 GenomeRNAi:5928 NextBio:23094
ArrayExpress:Q09028 Bgee:Q09028 CleanEx:HS_RBBP4
Genevestigator:Q09028 GermOnline:ENSG00000162521 Uniprot:Q09028
Length = 425
Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 105/308 (34%), Positives = 150/308 (48%)
Query: 165 KVAHQGCVNRIRAMSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGHGAPQVLNQS 224
K+ H+G VNR R M QNP I A+ + V V+D+ H +G P +
Sbjct: 120 KINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKH----PSKPDPSGECNPDL---- 171
Query: 225 PLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWN--VDPNP-FIGHAA 281
+ GH+ EGY + WNP G L+S + I LW+ ++ VD F GH A
Sbjct: 172 ---RLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTA 228
Query: 282 SVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFK--AHNADVNVISWNRLASCL 339
VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N + +
Sbjct: 229 VVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFI 288
Query: 340 LASGSDDGTFSIHDLRLLKGGDSVVAH-FEYHKHPVTSIEWSPHEGSTLAVSSADNQLTI 398
LA+GS D T ++ DLR LK + H FE HK + ++WSPH + LA S D +L +
Sbjct: 289 LATGSADKTVALWDLRNLK----LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNV 344
Query: 399 WDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQK-DLKELHWHTQVPGMIVST 457
WDLS + ED PP+LLFIH G + + W+ P +I S
Sbjct: 345 WDLS-----------KIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSV 393
Query: 458 AADGFNIL 465
+ D NI+
Sbjct: 394 SED--NIM 399
Score = 147 (56.8 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 49/228 (21%), Positives = 94/228 (41%)
Query: 192 GHVQVWD--FRSHLNALAESETVAGHGAPQVLNQSPLVK----FGGHKDEGYAIDWNPVA 245
G+ W+ HL + ++ T+ V + +V F GH + W+ +
Sbjct: 180 GYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLH 239
Query: 246 PGRLVSGDCNSCIHLWEPASDATWNVDPNPFI-GHAASVEDLQWSPTESDVFASCSVDGN 304
S + + +W+ S+ T P+ + H A V L ++P + A+ S D
Sbjct: 240 ESLFGSVADDQKLMIWDTRSNNTSK--PSHSVDAHTAEVNCLSFNPYSEFILATGSADKT 297
Query: 305 IAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLL------- 357
+A+WD R K L SF++H ++ + W+ +LAS D ++ DL +
Sbjct: 298 VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPE 357
Query: 358 ---KGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLS 402
G ++ H ++ W+P+E + S DN + +W ++
Sbjct: 358 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMA 405
>UNIPROTKB|I3LKT8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042826 "histone deacetylase binding" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0033186 "CAF-1
complex" evidence=IEA] [GO:0031497 "chromatin assembly"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 EMBL:FP312679
EMBL:FP325261 ProteinModelPortal:I3LKT8 PRIDE:I3LKT8
Ensembl:ENSSSCT00000023350 Uniprot:I3LKT8
Length = 390
Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 105/308 (34%), Positives = 150/308 (48%)
Query: 165 KVAHQGCVNRIRAMSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGHGAPQVLNQS 224
K+ H+G VNR R M QNP I A+ + V V+D+ H +G P +
Sbjct: 85 KINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKH----PSKPDPSGECNPDL---- 136
Query: 225 PLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWN--VDPNP-FIGHAA 281
+ GH+ EGY + WNP G L+S + I LW+ ++ VD F GH A
Sbjct: 137 ---RLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTA 193
Query: 282 SVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFK--AHNADVNVISWNRLASCL 339
VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N + +
Sbjct: 194 VVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFI 253
Query: 340 LASGSDDGTFSIHDLRLLKGGDSVVAH-FEYHKHPVTSIEWSPHEGSTLAVSSADNQLTI 398
LA+GS D T ++ DLR LK + H FE HK + ++WSPH + LA S D +L +
Sbjct: 254 LATGSADKTVALWDLRNLK----LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNV 309
Query: 399 WDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQK-DLKELHWHTQVPGMIVST 457
WDLS + ED PP+LLFIH G + + W+ P +I S
Sbjct: 310 WDLS-----------KIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSV 358
Query: 458 AADGFNIL 465
+ D NI+
Sbjct: 359 SED--NIM 364
Score = 147 (56.8 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 49/228 (21%), Positives = 94/228 (41%)
Query: 192 GHVQVWD--FRSHLNALAESETVAGHGAPQVLNQSPLVK----FGGHKDEGYAIDWNPVA 245
G+ W+ HL + ++ T+ V + +V F GH + W+ +
Sbjct: 145 GYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLH 204
Query: 246 PGRLVSGDCNSCIHLWEPASDATWNVDPNPFI-GHAASVEDLQWSPTESDVFASCSVDGN 304
S + + +W+ S+ T P+ + H A V L ++P + A+ S D
Sbjct: 205 ESLFGSVADDQKLMIWDTRSNNTSK--PSHSVDAHTAEVNCLSFNPYSEFILATGSADKT 262
Query: 305 IAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLL------- 357
+A+WD R K L SF++H ++ + W+ +LAS D ++ DL +
Sbjct: 263 VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPE 322
Query: 358 ---KGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLS 402
G ++ H ++ W+P+E + S DN + +W ++
Sbjct: 323 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMA 370
>UNIPROTKB|Q5RF92 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9601
"Pongo abelii" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 CTD:5928 HOVERGEN:HBG053236
EMBL:CR857269 RefSeq:NP_001124686.1 UniGene:Pab.10290
UniGene:Pab.17706 ProteinModelPortal:Q5RF92 SMR:Q5RF92
GeneID:100461561 KEGG:pon:100461561 InParanoid:Q5RF92
Uniprot:Q5RF92
Length = 425
Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 105/308 (34%), Positives = 150/308 (48%)
Query: 165 KVAHQGCVNRIRAMSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGHGAPQVLNQS 224
K+ H+G VNR R M QNP I A+ + V V+D+ H +G P +
Sbjct: 120 KINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKH----PSKPDPSGECNPDL---- 171
Query: 225 PLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWN--VDPNP-FIGHAA 281
+ GH+ EGY + WNP G L+S + I LW+ ++ VD F GH A
Sbjct: 172 ---RLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTA 228
Query: 282 SVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFK--AHNADVNVISWNRLASCL 339
VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N + +
Sbjct: 229 VVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFI 288
Query: 340 LASGSDDGTFSIHDLRLLKGGDSVVAH-FEYHKHPVTSIEWSPHEGSTLAVSSADNQLTI 398
LA+GS D T ++ DLR LK + H FE HK + ++WSPH + LA S D +L +
Sbjct: 289 LATGSADKTVALWDLRNLK----LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNV 344
Query: 399 WDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQK-DLKELHWHTQVPGMIVST 457
WDLS + ED PP+LLFIH G + + W+ P +I S
Sbjct: 345 WDLS-----------KIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSV 393
Query: 458 AADGFNIL 465
+ D NI+
Sbjct: 394 SED--NIM 399
Score = 147 (56.8 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 49/228 (21%), Positives = 94/228 (41%)
Query: 192 GHVQVWD--FRSHLNALAESETVAGHGAPQVLNQSPLVK----FGGHKDEGYAIDWNPVA 245
G+ W+ HL + ++ T+ V + +V F GH + W+ +
Sbjct: 180 GYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLH 239
Query: 246 PGRLVSGDCNSCIHLWEPASDATWNVDPNPFI-GHAASVEDLQWSPTESDVFASCSVDGN 304
S + + +W+ S+ T P+ + H A V L ++P + A+ S D
Sbjct: 240 ESLFGSVADDQKLMIWDTRSNNTSK--PSHSVDAHTAEVNCLSFNPYSEFILATGSADKT 297
Query: 305 IAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLL------- 357
+A+WD R K L SF++H ++ + W+ +LAS D ++ DL +
Sbjct: 298 VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPE 357
Query: 358 ---KGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLS 402
G ++ H ++ W+P+E + S DN + +W ++
Sbjct: 358 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMA 405
>MGI|MGI:1194912 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4"
species:10090 "Mus musculus" [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=ISO;TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=ISO;IDA] [GO:0016589 "NURF complex" evidence=ISO]
[GO:0031497 "chromatin assembly" evidence=ISO] [GO:0033186 "CAF-1
complex" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO;IDA] [GO:0042826 "histone deacetylase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1194912 EMBL:CH466552 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 EMBL:AL607123 GO:GO:0016589
GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH
EMBL:U35141 EMBL:CU234133 EMBL:BC138568 EMBL:BC138570
IPI:IPI00828412 PIR:I49366 RefSeq:NP_033056.2 UniGene:Mm.12145
ProteinModelPortal:Q60972 SMR:Q60972 DIP:DIP-32855N IntAct:Q60972
STRING:Q60972 PhosphoSite:Q60972 REPRODUCTION-2DPAGE:Q60972
PaxDb:Q60972 PRIDE:Q60972 Ensembl:ENSMUST00000102598 GeneID:19646
KEGG:mmu:19646 InParanoid:A2A875 NextBio:296894 Bgee:Q60972
CleanEx:MM_RBBP4 Genevestigator:Q60972
GermOnline:ENSMUSG00000057236 Uniprot:Q60972
Length = 425
Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 105/308 (34%), Positives = 150/308 (48%)
Query: 165 KVAHQGCVNRIRAMSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGHGAPQVLNQS 224
K+ H+G VNR R M QNP I A+ + V V+D+ H +G P +
Sbjct: 120 KINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKH----PSKPDPSGECNPDL---- 171
Query: 225 PLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWN--VDPNP-FIGHAA 281
+ GH+ EGY + WNP G L+S + I LW+ ++ VD F GH A
Sbjct: 172 ---RLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTA 228
Query: 282 SVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFK--AHNADVNVISWNRLASCL 339
VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N + +
Sbjct: 229 VVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFI 288
Query: 340 LASGSDDGTFSIHDLRLLKGGDSVVAH-FEYHKHPVTSIEWSPHEGSTLAVSSADNQLTI 398
LA+GS D T ++ DLR LK + H FE HK + ++WSPH + LA S D +L +
Sbjct: 289 LATGSADKTVALWDLRNLK----LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNV 344
Query: 399 WDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQK-DLKELHWHTQVPGMIVST 457
WDLS + ED PP+LLFIH G + + W+ P +I S
Sbjct: 345 WDLS-----------KIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSV 393
Query: 458 AADGFNIL 465
+ D NI+
Sbjct: 394 SED--NIM 399
Score = 147 (56.8 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 49/228 (21%), Positives = 94/228 (41%)
Query: 192 GHVQVWD--FRSHLNALAESETVAGHGAPQVLNQSPLVK----FGGHKDEGYAIDWNPVA 245
G+ W+ HL + ++ T+ V + +V F GH + W+ +
Sbjct: 180 GYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLH 239
Query: 246 PGRLVSGDCNSCIHLWEPASDATWNVDPNPFI-GHAASVEDLQWSPTESDVFASCSVDGN 304
S + + +W+ S+ T P+ + H A V L ++P + A+ S D
Sbjct: 240 ESLFGSVADDQKLMIWDTRSNNTSK--PSHSVDAHTAEVNCLSFNPYSEFILATGSADKT 297
Query: 305 IAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLL------- 357
+A+WD R K L SF++H ++ + W+ +LAS D ++ DL +
Sbjct: 298 VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPE 357
Query: 358 ---KGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLS 402
G ++ H ++ W+P+E + S DN + +W ++
Sbjct: 358 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMA 405
>RGD|1593768 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=IEA;ISO] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA;ISO] [GO:0016581 "NuRD complex"
evidence=IEA;ISO] [GO:0016589 "NURF complex" evidence=IEA;ISO]
[GO:0031497 "chromatin assembly" evidence=IEA;ISO] [GO:0033186
"CAF-1 complex" evidence=IEA;ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=IEA;ISO] [GO:0042826 "histone deacetylase binding"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1593768 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
EMBL:CH473968 HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC168994 IPI:IPI00366789
RefSeq:NP_001101382.1 UniGene:Rn.224577 SMR:B5DFB2 STRING:B5DFB2
Ensembl:ENSRNOT00000029177 GeneID:313048 KEGG:rno:313048
NextBio:665530 Genevestigator:B5DFB2 Uniprot:B5DFB2
Length = 425
Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 105/308 (34%), Positives = 150/308 (48%)
Query: 165 KVAHQGCVNRIRAMSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGHGAPQVLNQS 224
K+ H+G VNR R M QNP I A+ + V V+D+ H +G P +
Sbjct: 120 KINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKH----PSKPDPSGECNPDL---- 171
Query: 225 PLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWN--VDPNP-FIGHAA 281
+ GH+ EGY + WNP G L+S + I LW+ ++ VD F GH A
Sbjct: 172 ---RLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTA 228
Query: 282 SVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFK--AHNADVNVISWNRLASCL 339
VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N + +
Sbjct: 229 VVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFI 288
Query: 340 LASGSDDGTFSIHDLRLLKGGDSVVAH-FEYHKHPVTSIEWSPHEGSTLAVSSADNQLTI 398
LA+GS D T ++ DLR LK + H FE HK + ++WSPH + LA S D +L +
Sbjct: 289 LATGSADKTVALWDLRNLK----LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNV 344
Query: 399 WDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQK-DLKELHWHTQVPGMIVST 457
WDLS + ED PP+LLFIH G + + W+ P +I S
Sbjct: 345 WDLS-----------KIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSV 393
Query: 458 AADGFNIL 465
+ D NI+
Sbjct: 394 SED--NIM 399
Score = 147 (56.8 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 49/228 (21%), Positives = 94/228 (41%)
Query: 192 GHVQVWD--FRSHLNALAESETVAGHGAPQVLNQSPLVK----FGGHKDEGYAIDWNPVA 245
G+ W+ HL + ++ T+ V + +V F GH + W+ +
Sbjct: 180 GYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLH 239
Query: 246 PGRLVSGDCNSCIHLWEPASDATWNVDPNPFI-GHAASVEDLQWSPTESDVFASCSVDGN 304
S + + +W+ S+ T P+ + H A V L ++P + A+ S D
Sbjct: 240 ESLFGSVADDQKLMIWDTRSNNTSK--PSHSVDAHTAEVNCLSFNPYSEFILATGSADKT 297
Query: 305 IAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLL------- 357
+A+WD R K L SF++H ++ + W+ +LAS D ++ DL +
Sbjct: 298 VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPE 357
Query: 358 ---KGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLS 402
G ++ H ++ W+P+E + S DN + +W ++
Sbjct: 358 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMA 405
>UNIPROTKB|Q5M7K4 [details] [associations]
symbol:rbbp4 "Histone-binding protein RBBP4" species:8364
"Xenopus (Silurana) tropicalis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0016568 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0033186 InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:BC088588 UniGene:Str.6093
ProteinModelPortal:Q5M7K4 SMR:Q5M7K4 STRING:Q5M7K4
Xenbase:XB-GENE-482002 InParanoid:Q5M7K4 Uniprot:Q5M7K4
Length = 425
Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 105/308 (34%), Positives = 150/308 (48%)
Query: 165 KVAHQGCVNRIRAMSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGHGAPQVLNQS 224
K+ H+G VNR R M QNP I A+ + V V+D+ H +G P +
Sbjct: 120 KINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKH----PSKPDPSGECNPDL---- 171
Query: 225 PLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWN--VDPNP-FIGHAA 281
+ GH+ EGY + WNP G L+S + I LW+ ++ VD F GH A
Sbjct: 172 ---RLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTA 228
Query: 282 SVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFK--AHNADVNVISWNRLASCL 339
VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N + +
Sbjct: 229 VVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFI 288
Query: 340 LASGSDDGTFSIHDLRLLKGGDSVVAH-FEYHKHPVTSIEWSPHEGSTLAVSSADNQLTI 398
LA+GS D T ++ DLR LK + H FE HK + ++WSPH + LA S D +L +
Sbjct: 289 LATGSADKTVALWDLRNLK----LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNV 344
Query: 399 WDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQK-DLKELHWHTQVPGMIVST 457
WDLS + ED PP+LLFIH G + + W+ P +I S
Sbjct: 345 WDLS-----------KIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSV 393
Query: 458 AADGFNIL 465
+ D NI+
Sbjct: 394 SED--NIM 399
Score = 145 (56.1 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 42/185 (22%), Positives = 79/185 (42%)
Query: 229 FGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFI-GHAASVEDLQ 287
F GH + W+ + S + + +W+ S+ T P+ + H A V L
Sbjct: 223 FTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSK--PSHSVDAHTAEVNCLS 280
Query: 288 WSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDG 347
++P + A+ S D +A+WD R K L SF++H ++ + W+ +LAS D
Sbjct: 281 FNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDR 340
Query: 348 TFSIHDLRLL----------KGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLT 397
++ DL + G ++ H ++ W+P+E + S DN +
Sbjct: 341 RLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 400
Query: 398 IWDLS 402
+W ++
Sbjct: 401 VWQMA 405
>UNIPROTKB|Q6INH0 [details] [associations]
symbol:rbbp4-b "Histone-binding protein RBBP4-B"
species:8355 "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0031497
"chromatin assembly" evidence=ISS] [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0006338 GO:GO:0007049 GO:GO:0035098
GO:GO:0031497 GO:GO:0033186 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 EMBL:BC072311 RefSeq:NP_001085185.1
UniGene:Xl.86906 ProteinModelPortal:Q6INH0 SMR:Q6INH0 PRIDE:Q6INH0
DNASU:432269 GeneID:432269 KEGG:xla:432269 CTD:432269
Xenbase:XB-GENE-6255728 Uniprot:Q6INH0
Length = 425
Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
Identities = 105/308 (34%), Positives = 150/308 (48%)
Query: 165 KVAHQGCVNRIRAMSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGHGAPQVLNQS 224
K+ H+G VNR R M QNP I A+ + V V+D+ H +G P +
Sbjct: 120 KINHEGEVNRARYMPQNPCIIATKTPSCDVLVFDYTKH----PSKPDPSGECNPDL---- 171
Query: 225 PLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWN--VDPNP-FIGHAA 281
+ GH+ EGY + WNP G L+S + I LW+ ++ VD F GH A
Sbjct: 172 ---RLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTA 228
Query: 282 SVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFK--AHNADVNVISWNRLASCL 339
VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N + +
Sbjct: 229 VVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFI 288
Query: 340 LASGSDDGTFSIHDLRLLKGGDSVVAH-FEYHKHPVTSIEWSPHEGSTLAVSSADNQLTI 398
LA+GS D T ++ DLR LK + H FE HK + ++WSPH + LA S D +L +
Sbjct: 289 LATGSADKTVALWDLRNLK----LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNV 344
Query: 399 WDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQK-DLKELHWHTQVPGMIVST 457
WDLS + ED PP+LLFIH G + + W+ P +I S
Sbjct: 345 WDLS-----------KIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSV 393
Query: 458 AADGFNIL 465
+ D NI+
Sbjct: 394 SED--NIM 399
Score = 145 (56.1 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 42/185 (22%), Positives = 79/185 (42%)
Query: 229 FGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFI-GHAASVEDLQ 287
F GH + W+ + S + + +W+ S+ T P+ + H A V L
Sbjct: 223 FTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSK--PSHSVDAHTAEVNCLS 280
Query: 288 WSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDG 347
++P + A+ S D +A+WD R K L SF++H ++ + W+ +LAS D
Sbjct: 281 FNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDR 340
Query: 348 TFSIHDLRLL----------KGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLT 397
++ DL + G ++ H ++ W+P+E + S DN +
Sbjct: 341 RLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 400
Query: 398 IWDLS 402
+W ++
Sbjct: 401 VWQMA 405
>UNIPROTKB|Q6P315 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8364
"Xenopus (Silurana) tropicalis" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
OMA:DGFLLHV HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC064219
RefSeq:NP_989285.1 UniGene:Str.17153 ProteinModelPortal:Q6P315
SMR:Q6P315 STRING:Q6P315 Ensembl:ENSXETT00000002157 GeneID:394900
KEGG:xtr:394900 Xenbase:XB-GENE-487909 InParanoid:Q6P315
Uniprot:Q6P315
Length = 425
Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 104/308 (33%), Positives = 151/308 (49%)
Query: 165 KVAHQGCVNRIRAMSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGHGAPQVLNQS 224
K+ H+G VNR R M QNP I A+ + V V+D+ H +G + S
Sbjct: 119 KINHEGEVNRARYMPQNPCIIATKTPSADVLVFDYTKH----PSKPDPSG-------DCS 167
Query: 225 PLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWN--VDPNP-FIGHAA 281
P ++ GH+ EGY + WN G L+S + + LW+ ++ VD F GH+A
Sbjct: 168 PDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAIFTGHSA 227
Query: 282 SVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFK--AHNADVNVISWNRLASCL 339
VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N + +
Sbjct: 228 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFI 287
Query: 340 LASGSDDGTFSIHDLRLLKGGDSVVAH-FEYHKHPVTSIEWSPHEGSTLAVSSADNQLTI 398
LA+GS D T ++ DLR LK + H FE HK + + WSPH + LA S D +L +
Sbjct: 288 LATGSADKTVALWDLRNLK----LKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNV 343
Query: 399 WDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQK-DLKELHWHTQVPGMIVST 457
WDLS + ED PP+LLFIH G + + W+ P +I S
Sbjct: 344 WDLS-----------KIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSV 392
Query: 458 AADGFNIL 465
+ D NI+
Sbjct: 393 SED--NIM 398
Score = 148 (57.2 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 52/230 (22%), Positives = 97/230 (42%)
Query: 192 GHVQVWD--FRSHLNALAESETV------AGHGAPQVLNQSPLVKFGGHKDEGYAIDWNP 243
G+ W+ HL + ++ TV AG +V++ + F GH + W+
Sbjct: 179 GYGLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAI--FTGHSAVVEDVAWHL 236
Query: 244 VAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFI-GHAASVEDLQWSPTESDVFASCSVD 302
+ S + + +W+ S+ T P+ + H A V L ++P + A+ S D
Sbjct: 237 LHESLFGSVADDQKLMIWDTRSNTTSK--PSHSVDAHTAEVNCLSFNPYSEFILATGSAD 294
Query: 303 GNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLL----- 357
+A+WD R K L SF++H ++ + W+ +LAS D ++ DL +
Sbjct: 295 KTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQS 354
Query: 358 -----KGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLS 402
G ++ H ++ W+P+E + S DN + IW ++
Sbjct: 355 AEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 404
>UNIPROTKB|Q8AVH1 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8355
"Xenopus laevis" [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC042283
RefSeq:NP_001080364.1 UniGene:Xl.55215 ProteinModelPortal:Q8AVH1
SMR:Q8AVH1 PRIDE:Q8AVH1 GeneID:380056 KEGG:xla:380056
Xenbase:XB-GENE-487913 Uniprot:Q8AVH1
Length = 425
Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 103/308 (33%), Positives = 150/308 (48%)
Query: 165 KVAHQGCVNRIRAMSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGHGAPQVLNQS 224
K+ H+G VNR R M QNP I A+ + V V+D+ H +G +P +
Sbjct: 119 KINHEGEVNRARYMPQNPCIIATKTPSADVLVFDYTKH----PSKPDPSGECSPDL---- 170
Query: 225 PLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWN--VDPNP-FIGHAA 281
+ GH+ EGY + WN G L+S + + LW+ ++ VD F GH+A
Sbjct: 171 ---RLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAVFTGHSA 227
Query: 282 SVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFK--AHNADVNVISWNRLASCL 339
VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N + +
Sbjct: 228 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFI 287
Query: 340 LASGSDDGTFSIHDLRLLKGGDSVVAH-FEYHKHPVTSIEWSPHEGSTLAVSSADNQLTI 398
LA+GS D T ++ DLR LK + H FE HK + + WSPH + LA S D +L +
Sbjct: 288 LATGSADKTVALWDLRNLK----LKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNV 343
Query: 399 WDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQK-DLKELHWHTQVPGMIVST 457
WDLS + ED PP+LLFIH G + + W+ P +I S
Sbjct: 344 WDLS-----------KIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSV 392
Query: 458 AADGFNIL 465
+ D NI+
Sbjct: 393 SED--NIM 398
Score = 147 (56.8 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 52/230 (22%), Positives = 97/230 (42%)
Query: 192 GHVQVWD--FRSHLNALAESETV------AGHGAPQVLNQSPLVKFGGHKDEGYAIDWNP 243
G+ W+ HL + ++ TV AG +V++ + F GH + W+
Sbjct: 179 GYGLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAV--FTGHSAVVEDVAWHL 236
Query: 244 VAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFI-GHAASVEDLQWSPTESDVFASCSVD 302
+ S + + +W+ S+ T P+ + H A V L ++P + A+ S D
Sbjct: 237 LHESLFGSVADDQKLMIWDTRSNTTSK--PSHSVDAHTAEVNCLSFNPYSEFILATGSAD 294
Query: 303 GNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLL----- 357
+A+WD R K L SF++H ++ + W+ +LAS D ++ DL +
Sbjct: 295 KTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQS 354
Query: 358 -----KGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLS 402
G ++ H ++ W+P+E + S DN + IW ++
Sbjct: 355 AEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 404
>FB|FBgn0263979 [details] [associations]
symbol:Caf1 "Chromatin assembly factor 1 subunit"
species:7227 "Drosophila melanogaster" [GO:0016584 "nucleosome
positioning" evidence=IDA] [GO:0042826 "histone deacetylase
binding" evidence=ISS;IDA] [GO:0031497 "chromatin assembly"
evidence=ISS;IDA] [GO:0033186 "CAF-1 complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0042393 "histone
binding" evidence=IDA;NAS;TAS] [GO:0016590 "ACF complex"
evidence=IDA] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006334
"nucleosome assembly" evidence=NAS;IDA] [GO:0016573 "histone
acetylation" evidence=ISS;IDA] [GO:0016589 "NURF complex"
evidence=NAS;TAS;IPI] [GO:0035035 "histone acetyltransferase
binding" evidence=ISS;IPI] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0006335 "DNA replication-dependent nucleosome assembly"
evidence=NAS] [GO:0003682 "chromatin binding" evidence=NAS]
[GO:0006342 "chromatin silencing" evidence=IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0046976
"histone methyltransferase activity (H3-K27 specific)" evidence=IC]
[GO:0046974 "histone methyltransferase activity (H3-K9 specific)"
evidence=IC] [GO:0016571 "histone methylation" evidence=IDA]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0007307 "eggshell
chorion gene amplification" evidence=IC] [GO:0031523 "Myb complex"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0031491
"nucleosome binding" evidence=IDA] [GO:0042054 "histone
methyltransferase activity" evidence=IDA] [GO:0035097 "histone
methyltransferase complex" evidence=IDA] [GO:0007517 "muscle organ
development" evidence=IMP] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0070822 "Sin3-type complex" evidence=IDA] [GO:0007379 "segment
specification" evidence=IMP] [GO:0008284 "positive regulation of
cell proliferation" evidence=IMP] [GO:0061085 "regulation of
histone H3-K27 methylation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 GO:GO:0007346
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0000910 GO:GO:0048813
GO:GO:0007517 GO:GO:0035098 GO:GO:0007379 GO:GO:0006342
GO:GO:0051567 GO:GO:0042393 GO:GO:0005700 GO:GO:0042826
GO:GO:0035035 GO:GO:0042766 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0033186 EMBL:U62388 EMBL:AM294392 EMBL:AM294393
EMBL:AM294394 EMBL:AM294395 EMBL:AM294396 EMBL:AM294397
EMBL:AM294398 EMBL:AM294399 EMBL:AM294400 EMBL:AM294401
EMBL:AM294402 EMBL:AM294403 EMBL:AY061408 RefSeq:NP_524354.1
UniGene:Dm.1657 PDB:2XYI PDB:2YB8 PDB:2YBA PDB:3C99 PDB:3C9C
PDBsum:2XYI PDBsum:2YB8 PDBsum:2YBA PDBsum:3C99 PDBsum:3C9C
ProteinModelPortal:Q24572 SMR:Q24572 DIP:DIP-23697N IntAct:Q24572
MINT:MINT-252601 STRING:Q24572 PaxDb:Q24572 PRIDE:Q24572
EnsemblMetazoa:FBtr0083052 GeneID:41836 KEGG:dme:Dmel_CG4236
CTD:41836 FlyBase:FBgn0263347 GeneTree:ENSGT00570000079069
InParanoid:Q24572 KO:K10752 OMA:CQPDLRL OrthoDB:EOG4ZCRKP
PhylomeDB:Q24572 EvolutionaryTrace:Q24572 GenomeRNAi:41836
NextBio:825799 Bgee:Q24572 GermOnline:CG4236 GO:GO:0031523
GO:GO:0016581 GO:GO:0070822 GO:GO:0007307 GO:GO:0070734
InterPro:IPR022052 Pfam:PF12265 Uniprot:Q24572
Length = 430
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 107/308 (34%), Positives = 152/308 (49%)
Query: 165 KVAHQGCVNRIRAMSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGHGAPQVLNQS 224
K+ H+G VNR R M QN + A+ + V V+D+ H + S G Q
Sbjct: 124 KINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPS------GECQ----- 172
Query: 225 PLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWE-PASDATWNV-DP-NPFIGHAA 281
P ++ GH+ EGY + WNP G L+S + I LW+ A+ V D N F GH A
Sbjct: 173 PDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTA 232
Query: 282 SVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFK--AHNADVNVISWNRLASCL 339
VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N + +
Sbjct: 233 VVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFI 292
Query: 340 LASGSDDGTFSIHDLRLLKGGDSVVAH-FEYHKHPVTSIEWSPHEGSTLAVSSADNQLTI 398
LA+GS D T ++ DLR LK + H FE HK + ++WSPH + LA S D +L +
Sbjct: 293 LATGSADKTVALWDLRNLK----LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHV 348
Query: 399 WDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQK-DLKELHWHTQVPGMIVST 457
WDLS + ED PP+LLFIH G + + W+ P +I S
Sbjct: 349 WDLS-----------KIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSV 397
Query: 458 AADGFNIL 465
+ D NI+
Sbjct: 398 SED--NIM 403
Score = 137 (53.3 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 41/185 (22%), Positives = 78/185 (42%)
Query: 229 FGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFI-GHAASVEDLQ 287
F GH + W+ + S + + +W+ ++ T P+ + H A V L
Sbjct: 227 FTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSK--PSHTVDAHTAEVNCLS 284
Query: 288 WSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDG 347
++P + A+ S D +A+WD R K L SF++H ++ + W+ +LAS D
Sbjct: 285 FNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDR 344
Query: 348 TFSIHDLRLL----------KGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLT 397
+ DL + G ++ H ++ W+P+E + S DN +
Sbjct: 345 RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQ 404
Query: 398 IWDLS 402
+W ++
Sbjct: 405 VWQMA 409
>DICTYBASE|DDB_G0282529 [details] [associations]
symbol:rbbD "putative Retinoblastoma (Rb) binding
protein" species:44689 "Dictyostelium discoideum" [GO:0016568
"chromatin modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0282529 GO:GO:0005634
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 KO:K10752 OMA:CQPDLRL
InterPro:IPR022052 Pfam:PF12265 RefSeq:XP_640105.1
ProteinModelPortal:Q54SD4 SMR:Q54SD4 STRING:Q54SD4 PRIDE:Q54SD4
EnsemblProtists:DDB0232003 GeneID:8623636 KEGG:ddi:DDB_G0282529
ProtClustDB:CLSZ2430461 Uniprot:Q54SD4
Length = 423
Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 109/325 (33%), Positives = 156/325 (48%)
Query: 163 LRKVAHQGCVNRIRAMSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGHGAPQVLN 222
++K+ H+G VNR R M QN I A+ + V ++D H L T G
Sbjct: 115 IQKINHEGEVNRARVMPQNHSIIATKTVSSEVYIFDTTKH--PL--EPTPDG-------K 163
Query: 223 QSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWE--PASDATWNVDP-NPFIGH 279
SP +K GHK EGY I WNP G L+S + I +W+ AS + +D N + GH
Sbjct: 164 CSPNLKLTGHKKEGYGISWNPRKEGHLLSCSDDQSICMWDISAASKSDSTLDALNIYNGH 223
Query: 280 AASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCL 339
+ VED+ W F S D + IWDTR G + +AHN++VN +S+N L
Sbjct: 224 TSIVEDVAWHYIHDTFFGSVGDDKKLMIWDTRTGTKPIHVVEAHNSEVNCLSFNPFCEFL 283
Query: 340 LASGSDDGTFSIHDLRLLKGG-DSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTI 398
+A+GS D T ++ D+R L S+++H + V +++SPH + LA +D ++ +
Sbjct: 284 VATGSTDKTVALWDMRNLGNRLHSLISHTD----EVFQVQFSPHNETVLASCGSDRRVNV 339
Query: 399 WDLSLXXXXXXXXXXXXXTREQVNAPE-DLPPQLLFIHQGQKD-LKELHWHTQVPGMIVS 456
WDLS EQ N D PP+LLFIH G + + W+ P I S
Sbjct: 340 WDLSRIG------------EEQNNEDAADGPPELLFIHGGHTSKISDFSWNPNDPWSIAS 387
Query: 457 TAADGFNIL----MPSNIQSTLPQD 477
A D NIL M NI + D
Sbjct: 388 VAED--NILQIWQMAENIYNDREDD 410
>RGD|1563620 [details] [associations]
symbol:RGD1563620 "similar to retinoblastoma binding protein 4"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1563620 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OrthoDB:EOG4DBTDH IPI:IPI00368073
ProteinModelPortal:D4A250 Ensembl:ENSRNOT00000033132 Uniprot:D4A250
Length = 425
Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
Identities = 104/308 (33%), Positives = 147/308 (47%)
Query: 165 KVAHQGCVNRIRAMSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGHGAPQVLNQS 224
K+ ++G VNR R M QNP I A+ + V V+D+ H +G N
Sbjct: 120 KINYEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKH----PSKPDPSGE-----CNSD 170
Query: 225 PLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWE-PASDATWNV--DPNPFIGHAA 281
+ GH+ EGY + WNP G L+S + I LW+ A V F GH A
Sbjct: 171 --LHLRGHQKEGYGLSWNPYLSGYLLSASDDHTICLWDISAVPKEGKVVGAKTIFTGHTA 228
Query: 282 SVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFK--AHNADVNVISWNRLASCL 339
VED+ W +F S + D + IWDTR ++ S A+ A+VN +S+N + +
Sbjct: 229 VVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAYTAEVNCLSFNPNSEFI 288
Query: 340 LASGSDDGTFSIHDLRLLKGGDSVVAH-FEYHKHPVTSIEWSPHEGSTLAVSSADNQLTI 398
LASGS D T ++ DLR LK + H FE HK + ++WSPH + LA S D +L +
Sbjct: 289 LASGSPDKTVALWDLRNLK----LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNV 344
Query: 399 WDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQK-DLKELHWHTQVPGMIVST 457
WDLS + ED PP+LLFIH G + + W+ P +I S
Sbjct: 345 WDLS-----------KIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSV 393
Query: 458 AADGFNIL 465
+ D NI+
Sbjct: 394 SED--NIM 399
Score = 142 (55.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 42/185 (22%), Positives = 79/185 (42%)
Query: 229 FGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFI-GHAASVEDLQ 287
F GH + W+ + S + + +W+ S+ T P+ + + A V L
Sbjct: 223 FTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSK--PSHSVDAYTAEVNCLS 280
Query: 288 WSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDG 347
++P + AS S D +A+WD R K L SF++H ++ + W+ +LAS D
Sbjct: 281 FNPNSEFILASGSPDKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDR 340
Query: 348 TFSIHDLRLL----------KGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLT 397
++ DL + G ++ H ++ W+P+E + S DN +
Sbjct: 341 RLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 400
Query: 398 IWDLS 402
+W ++
Sbjct: 401 VWQMA 405
>UNIPROTKB|Q61Y48 [details] [associations]
symbol:lin-53 "Probable histone-binding protein lin-53"
species:6238 "Caenorhabditis briggsae" [GO:0005634 "nucleus"
evidence=ISS] [GO:0009790 "embryo development" evidence=ISS]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0040035 "hermaphrodite genitalia development"
evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0017053 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0040035 GO:GO:0042826
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 EMBL:HE600990
ProteinModelPortal:Q61Y48 SMR:Q61Y48 STRING:Q61Y48 PRIDE:Q61Y48
EnsemblMetazoa:CBG03710 WormBase:CBG03710 Uniprot:Q61Y48
Length = 416
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 97/306 (31%), Positives = 149/306 (48%)
Query: 165 KVAHQGCVNRIRAMSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGHGAPQVLNQS 224
++ H+G VNR R M Q P I A+ + + V ++D+ + + P+ +
Sbjct: 116 RINHEGEVNRARYMPQKPTIIATKSPSADVYIFDYTKYPSV------------PKDNTFN 163
Query: 225 PLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNP---FIGHAA 281
PL+K GH EGY + WNP G ++S + + W+ +A N + F GH +
Sbjct: 164 PLLKLKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINGNAGANGELKAREIFKGHES 223
Query: 282 SVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLA 341
VED+ W VF S D + IWD R + AH+A+VN +++N + +LA
Sbjct: 224 VVEDVAWHVLHDGVFGSVGDDKKLLIWDLRTNVPG-HAIDAHSAEVNCLAFNPYSEFILA 282
Query: 342 SGSDDGTFSIHDLRLLKGGDSVVAH-FEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWD 400
+GS D T ++ DLR L+ + H FE H+ + ++WSPH + LA S D +L +WD
Sbjct: 283 TGSADKTVALWDLRNLR----LKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWD 338
Query: 401 LSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQK-DLKELHWHTQVPGMIVSTAA 459
LS T E ED PP+LLFIH G + + W+ P ++ S +
Sbjct: 339 LS--------KIGEDQTAEDA---EDGPPELLFIHGGHTAKISDFSWNPNEPWVVCSVSE 387
Query: 460 DGFNIL 465
D NIL
Sbjct: 388 D--NIL 391
Score = 154 (59.3 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 47/186 (25%), Positives = 79/186 (42%)
Query: 229 FGGHKDEGYAIDWNPVAPGRLVS-GDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQ 287
F GH+ + W+ + G S GD + +W D NV + H+A V L
Sbjct: 218 FKGHESVVEDVAWHVLHDGVFGSVGDDKKLL-IW----DLRTNVPGHAIDAHSAEVNCLA 272
Query: 288 WSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDG 347
++P + A+ S D +A+WD R + L SF++H ++ + W+ +LAS D
Sbjct: 273 FNPYSEFILATGSADKTVALWDLRNLRLKLHSFESHRDEIFQVQWSPHNETILASSGTDK 332
Query: 348 TFSIHDLRLLKGGDSVVAHFEY-----------HKHPVTSIEWSPHEGSTLAVSSADNQL 396
+ DL + G D E H ++ W+P+E + S DN L
Sbjct: 333 RLHVWDLSKI-GEDQTAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVVCSVSEDNIL 391
Query: 397 TIWDLS 402
+W ++
Sbjct: 392 QVWQMA 397
>WB|WBGene00003036 [details] [associations]
symbol:lin-53 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040027
"negative regulation of vulval development" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0048557
"embryonic digestive tract morphogenesis" evidence=IGI] [GO:0005634
"nucleus" evidence=IDA] [GO:0045138 "tail tip morphogenesis"
evidence=IMP] [GO:0001708 "cell fate specification" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070176 "DRM
complex" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0001708 GO:GO:0009792 GO:GO:0006915
GO:GO:0045892 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0040035 GO:GO:0045138 GO:GO:0040027
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0048557 HOGENOM:HOG000160330 EMBL:AF116530
EMBL:Z81097 EMBL:AL023833 PIR:T23391 RefSeq:NP_492552.1
UniGene:Cel.19610 ProteinModelPortal:P90916 SMR:P90916
IntAct:P90916 MINT:MINT-114323 STRING:P90916 PaxDb:P90916
EnsemblMetazoa:K07A1.12.1 EnsemblMetazoa:K07A1.12.2 GeneID:172802
KEGG:cel:CELE_K07A1.12 UCSC:K07A1.12.1 CTD:172802 WormBase:K07A1.12
InParanoid:P90916 OMA:DGFLLHV NextBio:877063 GO:GO:0070176
Uniprot:P90916
Length = 417
Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
Identities = 98/323 (30%), Positives = 154/323 (47%)
Query: 165 KVAHQGCVNRIRAMSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGHGAPQVLNQS 224
++ H+G VNR R M Q +I A+ + V ++D+ H +A+ T +
Sbjct: 116 RINHEGEVNRARYMPQKSNIIATKSPHADVYIFDYLKH-SAVPRDNTF-----------N 163
Query: 225 PLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVD-----PNPFIGH 279
PL++ GH EGY + WNP G ++S + + W+ +A NV + F GH
Sbjct: 164 PLIRLKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWD--INANQNVAGELQAKDVFKGH 221
Query: 280 AASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCL 339
+ VED+ W VF S D + IWD R AH+A+VN +++N + +
Sbjct: 222 ESVVEDVAWHVLHDGVFGSVGDDKKLLIWDVRTSTPG-HCIDAHSAEVNCLAFNPYSEFI 280
Query: 340 LASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
LA+GS D T ++ DLR L+ + FE H+ + ++WSPH + LA S D +L +W
Sbjct: 281 LATGSADKTVALWDLRNLR---MKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVW 337
Query: 400 DLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQK-DLKELHWHTQVPGMIVSTA 458
DLS + ED PP+LLFIH G + + W+ P ++ S +
Sbjct: 338 DLSKIGED-----------QSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVVCSVS 386
Query: 459 ADGFNIL----MPSNIQSTLPQD 477
D NIL M NI + + ++
Sbjct: 387 ED--NILQVWQMADNIYNEVDEE 407
>UNIPROTKB|P90916 [details] [associations]
symbol:lin-53 "Probable histone-binding protein lin-53"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0042826 "histone deacetylase binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0070176
"DRM complex" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0017053
"transcriptional repressor complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0001708 GO:GO:0009792 GO:GO:0006915 GO:GO:0045892
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0040035 GO:GO:0045138
GO:GO:0040027 GeneTree:ENSGT00570000079069 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0048557 HOGENOM:HOG000160330
EMBL:AF116530 EMBL:Z81097 EMBL:AL023833 PIR:T23391
RefSeq:NP_492552.1 UniGene:Cel.19610 ProteinModelPortal:P90916
SMR:P90916 IntAct:P90916 MINT:MINT-114323 STRING:P90916
PaxDb:P90916 EnsemblMetazoa:K07A1.12.1 EnsemblMetazoa:K07A1.12.2
GeneID:172802 KEGG:cel:CELE_K07A1.12 UCSC:K07A1.12.1 CTD:172802
WormBase:K07A1.12 InParanoid:P90916 OMA:DGFLLHV NextBio:877063
GO:GO:0070176 Uniprot:P90916
Length = 417
Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
Identities = 98/323 (30%), Positives = 154/323 (47%)
Query: 165 KVAHQGCVNRIRAMSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGHGAPQVLNQS 224
++ H+G VNR R M Q +I A+ + V ++D+ H +A+ T +
Sbjct: 116 RINHEGEVNRARYMPQKSNIIATKSPHADVYIFDYLKH-SAVPRDNTF-----------N 163
Query: 225 PLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVD-----PNPFIGH 279
PL++ GH EGY + WNP G ++S + + W+ +A NV + F GH
Sbjct: 164 PLIRLKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWD--INANQNVAGELQAKDVFKGH 221
Query: 280 AASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCL 339
+ VED+ W VF S D + IWD R AH+A+VN +++N + +
Sbjct: 222 ESVVEDVAWHVLHDGVFGSVGDDKKLLIWDVRTSTPG-HCIDAHSAEVNCLAFNPYSEFI 280
Query: 340 LASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
LA+GS D T ++ DLR L+ + FE H+ + ++WSPH + LA S D +L +W
Sbjct: 281 LATGSADKTVALWDLRNLR---MKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVW 337
Query: 400 DLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQK-DLKELHWHTQVPGMIVSTA 458
DLS + ED PP+LLFIH G + + W+ P ++ S +
Sbjct: 338 DLSKIGED-----------QSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVVCSVS 386
Query: 459 ADGFNIL----MPSNIQSTLPQD 477
D NIL M NI + + ++
Sbjct: 387 ED--NILQVWQMADNIYNEVDEE 407
>ZFIN|ZDB-GENE-030131-445 [details] [associations]
symbol:rbb4 "retinoblastoma binding protein 4"
species:7955 "Danio rerio" [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-445
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BX465206
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
IPI:IPI00995625 Ensembl:ENSDART00000130326 ArrayExpress:E7FEX2
Bgee:E7FEX2 Uniprot:E7FEX2
Length = 444
Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
Identities = 89/244 (36%), Positives = 125/244 (51%)
Query: 165 KVAHQGCVNRIRAMSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGHGAPQVLNQS 224
K+ H+G VNR R M QNP I A+ T V V+D+ H +G P +
Sbjct: 120 KINHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKH----PSKPDPSGECTPDL---- 171
Query: 225 PLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWN--VDPNP-FIGHAA 281
+ GH+ EGY + WNP G L+S + I LW+ ++ VD F GH A
Sbjct: 172 ---RLRGHQKEGYGLSWNPNLSGCLLSASDDHTICLWDISTVPKEGKIVDAKTIFTGHTA 228
Query: 282 SVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFK--AHNADVNVISWNRLASCL 339
VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N + +
Sbjct: 229 VVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFI 288
Query: 340 LASGSDDGTFSIHDLRLLKGGDSVVAH-FEYHKHPVTSIEWSPHEGSTLAVSSADNQLTI 398
LA+GS D T ++ DLR LK + H FE HK + ++WSPH + LA S D +L +
Sbjct: 289 LATGSADKTVALWDLRNLK----LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNV 344
Query: 399 WDLS 402
WDLS
Sbjct: 345 WDLS 348
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 87/249 (34%), Positives = 126/249 (50%)
Query: 224 SPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWN--VDPNP-FIGHA 280
+P ++ GH+ EGY + WNP G L+S + I LW+ ++ VD F GH
Sbjct: 168 TPDLRLRGHQKEGYGLSWNPNLSGCLLSASDDHTICLWDISTVPKEGKIVDAKTIFTGHT 227
Query: 281 ASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFK--AHNADVNVISWNRLASC 338
A VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N +
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEF 287
Query: 339 LLASGSDDGTFSIHDLRLLKGGDSVVAH-FEYHKHPVTSIEWSPHEGSTLAVSSADNQLT 397
+LA+GS D T ++ DLR LK + H FE HK + ++WSPH + LA S D +L
Sbjct: 288 ILATGSADKTVALWDLRNLK----LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLN 343
Query: 398 IWDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQK-DLKELHWHTQVPGMIVS 456
+WDLS + ED PP+LLFIH G + + W+ P +I S
Sbjct: 344 VWDLS-----------KIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICS 392
Query: 457 TAADGFNIL 465
+ D NI+
Sbjct: 393 VSED--NIM 399
Score = 146 (56.5 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 47/212 (22%), Positives = 90/212 (42%)
Query: 202 HLNALAESETVAGHGAPQVLNQSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLW 261
H L + TV G ++++ + F GH + W+ + S + + +W
Sbjct: 200 HTICLWDISTVPKEG--KIVDAKTI--FTGHTAVVEDVSWHLLHESLFGSVADDQKLMIW 255
Query: 262 EPASDATWNVDPNPFI-GHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSF 320
+ S+ T P+ + H A V L ++P + A+ S D +A+WD R K L SF
Sbjct: 256 DTRSNNTSK--PSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF 313
Query: 321 KAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLL----------KGGDSVVAHFEYH 370
++H ++ + W+ +LAS D ++ DL + G ++ H
Sbjct: 314 ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGH 373
Query: 371 KHPVTSIEWSPHEGSTLAVSSADNQLTIWDLS 402
++ W+P+E + S DN + +W ++
Sbjct: 374 TAKISDFSWNPNEPWVICSVSEDNIMQVWQMA 405
>UNIPROTKB|Q3SWX8 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9913
"Bos taurus" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0070370
"cellular heat acclimation" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC104613 IPI:IPI00709403
RefSeq:NP_001029810.1 UniGene:Bt.4908 ProteinModelPortal:Q3SWX8
SMR:Q3SWX8 STRING:Q3SWX8 PRIDE:Q3SWX8 Ensembl:ENSBTAT00000029923
GeneID:537402 KEGG:bta:537402 CTD:5931 InParanoid:Q3SWX8 KO:K11659
NextBio:20877129 Uniprot:Q3SWX8
Length = 425
Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 88/244 (36%), Positives = 127/244 (52%)
Query: 165 KVAHQGCVNRIRAMSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGHGAPQVLNQS 224
K+ H+G VNR R M QNPHI A+ + V V+D+ H A+ + +G P +
Sbjct: 119 KINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHP---AKPDP-SGECNPDL---- 170
Query: 225 PLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWN--VDPNP-FIGHAA 281
+ GH+ EGY + WN G L+S + + LW+ + VD F GH+A
Sbjct: 171 ---RLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSA 227
Query: 282 SVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSF--KAHNADVNVISWNRLASCL 339
VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N + +
Sbjct: 228 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFI 287
Query: 340 LASGSDDGTFSIHDLRLLKGGDSVVAH-FEYHKHPVTSIEWSPHEGSTLAVSSADNQLTI 398
LA+GS D T ++ DLR LK + H FE HK + + WSPH + LA S D +L +
Sbjct: 288 LATGSADKTVALWDLRNLK----LKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNV 343
Query: 399 WDLS 402
WDLS
Sbjct: 344 WDLS 347
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 85/249 (34%), Positives = 124/249 (49%)
Query: 224 SPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWN--VDPNP-FIGHA 280
+P ++ GH+ EGY + WN G L+S + + LW+ + VD F GH+
Sbjct: 167 NPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHS 226
Query: 281 ASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSF--KAHNADVNVISWNRLASC 338
A VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N +
Sbjct: 227 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEF 286
Query: 339 LLASGSDDGTFSIHDLRLLKGGDSVVAH-FEYHKHPVTSIEWSPHEGSTLAVSSADNQLT 397
+LA+GS D T ++ DLR LK + H FE HK + + WSPH + LA S D +L
Sbjct: 287 ILATGSADKTVALWDLRNLK----LKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLN 342
Query: 398 IWDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQK-DLKELHWHTQVPGMIVS 456
+WDLS + ED PP+LLFIH G + + W+ P +I S
Sbjct: 343 VWDLS-----------KIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICS 391
Query: 457 TAADGFNIL 465
+ D NI+
Sbjct: 392 VSED--NIM 398
Score = 146 (56.5 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 50/230 (21%), Positives = 97/230 (42%)
Query: 192 GHVQVWD--FRSHLNALAESETV------AGHGAPQVLNQSPLVKFGGHKDEGYAIDWNP 243
G+ W+ HL + ++ TV AG ++++ + F GH + W+
Sbjct: 179 GYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAI--FTGHSAVVEDVAWHL 236
Query: 244 VAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFI-GHAASVEDLQWSPTESDVFASCSVD 302
+ S + + +W+ S+ T P+ + H A V L ++P + A+ S D
Sbjct: 237 LHESLFGSVADDQKLMIWDTRSNTTSK--PSHLVDAHTAEVNCLSFNPYSEFILATGSAD 294
Query: 303 GNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLL----- 357
+A+WD R K L +F++H ++ + W+ +LAS D ++ DL +
Sbjct: 295 KTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQS 354
Query: 358 -----KGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLS 402
G ++ H ++ W+P+E + S DN + IW ++
Sbjct: 355 AEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 404
>UNIPROTKB|E2RM49 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
CTD:5931 KO:K11659 EMBL:AAEX03026166 RefSeq:XP_857851.1
ProteinModelPortal:E2RM49 Ensembl:ENSCAFT00000020249 GeneID:480854
KEGG:cfa:480854 NextBio:20855780 Uniprot:E2RM49
Length = 425
Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 88/244 (36%), Positives = 127/244 (52%)
Query: 165 KVAHQGCVNRIRAMSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGHGAPQVLNQS 224
K+ H+G VNR R M QNPHI A+ + V V+D+ H A+ + +G P +
Sbjct: 119 KINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHP---AKPDP-SGECNPDL---- 170
Query: 225 PLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWN--VDPNP-FIGHAA 281
+ GH+ EGY + WN G L+S + + LW+ + VD F GH+A
Sbjct: 171 ---RLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSA 227
Query: 282 SVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSF--KAHNADVNVISWNRLASCL 339
VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N + +
Sbjct: 228 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFI 287
Query: 340 LASGSDDGTFSIHDLRLLKGGDSVVAH-FEYHKHPVTSIEWSPHEGSTLAVSSADNQLTI 398
LA+GS D T ++ DLR LK + H FE HK + + WSPH + LA S D +L +
Sbjct: 288 LATGSADKTVALWDLRNLK----LKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNV 343
Query: 399 WDLS 402
WDLS
Sbjct: 344 WDLS 347
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 85/249 (34%), Positives = 124/249 (49%)
Query: 224 SPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWN--VDPNP-FIGHA 280
+P ++ GH+ EGY + WN G L+S + + LW+ + VD F GH+
Sbjct: 167 NPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHS 226
Query: 281 ASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSF--KAHNADVNVISWNRLASC 338
A VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N +
Sbjct: 227 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEF 286
Query: 339 LLASGSDDGTFSIHDLRLLKGGDSVVAH-FEYHKHPVTSIEWSPHEGSTLAVSSADNQLT 397
+LA+GS D T ++ DLR LK + H FE HK + + WSPH + LA S D +L
Sbjct: 287 ILATGSADKTVALWDLRNLK----LKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLN 342
Query: 398 IWDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQK-DLKELHWHTQVPGMIVS 456
+WDLS + ED PP+LLFIH G + + W+ P +I S
Sbjct: 343 VWDLS-----------KIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICS 391
Query: 457 TAADGFNIL 465
+ D NI+
Sbjct: 392 VSED--NIM 398
Score = 146 (56.5 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 50/230 (21%), Positives = 97/230 (42%)
Query: 192 GHVQVWD--FRSHLNALAESETV------AGHGAPQVLNQSPLVKFGGHKDEGYAIDWNP 243
G+ W+ HL + ++ TV AG ++++ + F GH + W+
Sbjct: 179 GYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAI--FTGHSAVVEDVAWHL 236
Query: 244 VAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFI-GHAASVEDLQWSPTESDVFASCSVD 302
+ S + + +W+ S+ T P+ + H A V L ++P + A+ S D
Sbjct: 237 LHESLFGSVADDQKLMIWDTRSNTTSK--PSHLVDAHTAEVNCLSFNPYSEFILATGSAD 294
Query: 303 GNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLL----- 357
+A+WD R K L +F++H ++ + W+ +LAS D ++ DL +
Sbjct: 295 KTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQS 354
Query: 358 -----KGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLS 402
G ++ H ++ W+P+E + S DN + IW ++
Sbjct: 355 AEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 404
>UNIPROTKB|E2RM67 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070370 "cellular heat acclimation"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 OMA:DGFLLHV CTD:5931 KO:K11659 EMBL:AAEX03026166
GeneID:480854 KEGG:cfa:480854 NextBio:20855780 RefSeq:XP_849201.1
ProteinModelPortal:E2RM67 Ensembl:ENSCAFT00000020227 Uniprot:E2RM67
Length = 469
Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 88/244 (36%), Positives = 127/244 (52%)
Query: 165 KVAHQGCVNRIRAMSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGHGAPQVLNQS 224
K+ H+G VNR R M QNPHI A+ + V V+D+ H A+ + +G P +
Sbjct: 163 KINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHP---AKPDP-SGECNPDL---- 214
Query: 225 PLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWN--VDPNP-FIGHAA 281
+ GH+ EGY + WN G L+S + + LW+ + VD F GH+A
Sbjct: 215 ---RLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSA 271
Query: 282 SVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSF--KAHNADVNVISWNRLASCL 339
VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N + +
Sbjct: 272 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFI 331
Query: 340 LASGSDDGTFSIHDLRLLKGGDSVVAH-FEYHKHPVTSIEWSPHEGSTLAVSSADNQLTI 398
LA+GS D T ++ DLR LK + H FE HK + + WSPH + LA S D +L +
Sbjct: 332 LATGSADKTVALWDLRNLK----LKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNV 387
Query: 399 WDLS 402
WDLS
Sbjct: 388 WDLS 391
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 85/249 (34%), Positives = 124/249 (49%)
Query: 224 SPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWN--VDPNP-FIGHA 280
+P ++ GH+ EGY + WN G L+S + + LW+ + VD F GH+
Sbjct: 211 NPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHS 270
Query: 281 ASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSF--KAHNADVNVISWNRLASC 338
A VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N +
Sbjct: 271 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEF 330
Query: 339 LLASGSDDGTFSIHDLRLLKGGDSVVAH-FEYHKHPVTSIEWSPHEGSTLAVSSADNQLT 397
+LA+GS D T ++ DLR LK + H FE HK + + WSPH + LA S D +L
Sbjct: 331 ILATGSADKTVALWDLRNLK----LKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLN 386
Query: 398 IWDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQK-DLKELHWHTQVPGMIVS 456
+WDLS + ED PP+LLFIH G + + W+ P +I S
Sbjct: 387 VWDLS-----------KIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICS 435
Query: 457 TAADGFNIL 465
+ D NI+
Sbjct: 436 VSED--NIM 442
Score = 146 (56.5 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 50/230 (21%), Positives = 97/230 (42%)
Query: 192 GHVQVWD--FRSHLNALAESETV------AGHGAPQVLNQSPLVKFGGHKDEGYAIDWNP 243
G+ W+ HL + ++ TV AG ++++ + F GH + W+
Sbjct: 223 GYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAI--FTGHSAVVEDVAWHL 280
Query: 244 VAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFI-GHAASVEDLQWSPTESDVFASCSVD 302
+ S + + +W+ S+ T P+ + H A V L ++P + A+ S D
Sbjct: 281 LHESLFGSVADDQKLMIWDTRSNTTSK--PSHLVDAHTAEVNCLSFNPYSEFILATGSAD 338
Query: 303 GNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLL----- 357
+A+WD R K L +F++H ++ + W+ +LAS D ++ DL +
Sbjct: 339 KTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQS 398
Query: 358 -----KGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLS 402
G ++ H ++ W+P+E + S DN + IW ++
Sbjct: 399 AEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 448
>UNIPROTKB|E9PC52 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AL929302 HGNC:HGNC:9890
ChiTaRS:RBBP7 IPI:IPI00879702 ProteinModelPortal:E9PC52 SMR:E9PC52
PRIDE:E9PC52 Ensembl:ENST00000404022 ArrayExpress:E9PC52
Bgee:E9PC52 Uniprot:E9PC52
Length = 416
Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 88/244 (36%), Positives = 127/244 (52%)
Query: 165 KVAHQGCVNRIRAMSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGHGAPQVLNQS 224
K+ H+G VNR R M QNPHI A+ + V V+D+ H A+ + +G P +
Sbjct: 110 KINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHP---AKPDP-SGECNPDL---- 161
Query: 225 PLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWN--VDPNP-FIGHAA 281
+ GH+ EGY + WN G L+S + + LW+ + VD F GH+A
Sbjct: 162 ---RLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSA 218
Query: 282 SVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSF--KAHNADVNVISWNRLASCL 339
VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N + +
Sbjct: 219 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFI 278
Query: 340 LASGSDDGTFSIHDLRLLKGGDSVVAH-FEYHKHPVTSIEWSPHEGSTLAVSSADNQLTI 398
LA+GS D T ++ DLR LK + H FE HK + + WSPH + LA S D +L +
Sbjct: 279 LATGSADKTVALWDLRNLK----LKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNV 334
Query: 399 WDLS 402
WDLS
Sbjct: 335 WDLS 338
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 85/249 (34%), Positives = 124/249 (49%)
Query: 224 SPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWN--VDPNP-FIGHA 280
+P ++ GH+ EGY + WN G L+S + + LW+ + VD F GH+
Sbjct: 158 NPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHS 217
Query: 281 ASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSF--KAHNADVNVISWNRLASC 338
A VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N +
Sbjct: 218 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEF 277
Query: 339 LLASGSDDGTFSIHDLRLLKGGDSVVAH-FEYHKHPVTSIEWSPHEGSTLAVSSADNQLT 397
+LA+GS D T ++ DLR LK + H FE HK + + WSPH + LA S D +L
Sbjct: 278 ILATGSADKTVALWDLRNLK----LKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLN 333
Query: 398 IWDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQK-DLKELHWHTQVPGMIVS 456
+WDLS + ED PP+LLFIH G + + W+ P +I S
Sbjct: 334 VWDLS-----------KIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICS 382
Query: 457 TAADGFNIL 465
+ D NI+
Sbjct: 383 VSED--NIM 389
Score = 146 (56.5 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 50/230 (21%), Positives = 97/230 (42%)
Query: 192 GHVQVWD--FRSHLNALAESETV------AGHGAPQVLNQSPLVKFGGHKDEGYAIDWNP 243
G+ W+ HL + ++ TV AG ++++ + F GH + W+
Sbjct: 170 GYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAI--FTGHSAVVEDVAWHL 227
Query: 244 VAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFI-GHAASVEDLQWSPTESDVFASCSVD 302
+ S + + +W+ S+ T P+ + H A V L ++P + A+ S D
Sbjct: 228 LHESLFGSVADDQKLMIWDTRSNTTSK--PSHLVDAHTAEVNCLSFNPYSEFILATGSAD 285
Query: 303 GNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLL----- 357
+A+WD R K L +F++H ++ + W+ +LAS D ++ DL +
Sbjct: 286 KTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQS 345
Query: 358 -----KGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLS 402
G ++ H ++ W+P+E + S DN + IW ++
Sbjct: 346 AEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 395
>UNIPROTKB|Q16576 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IDA] [GO:0030308 "negative regulation of cell growth"
evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070370 "cellular
heat acclimation" evidence=IDA] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0008283 "cell
proliferation" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0034080 "CENP-A containing nucleosome assembly at centromere"
evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007275
Pathway_Interaction_DB:telomerasepathway Reactome:REACT_115566
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122
GO:GO:0035098 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 PDB:3CFS PDB:3CFV
PDBsum:3CFS PDBsum:3CFV HOGENOM:HOG000160330 OMA:DGFLLHV
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35143
EMBL:X72841 EMBL:AK091911 EMBL:AL929302 IPI:IPI00395865
IPI:IPI00646512 PIR:I39181 RefSeq:NP_001185648.1 RefSeq:NP_002884.1
UniGene:Hs.495755 ProteinModelPortal:Q16576 SMR:Q16576 DIP:DIP-436N
IntAct:Q16576 MINT:MINT-90512 STRING:Q16576 PhosphoSite:Q16576
DMDM:2494891 PaxDb:Q16576 PeptideAtlas:Q16576 PRIDE:Q16576
Ensembl:ENST00000380084 Ensembl:ENST00000380087 GeneID:5931
KEGG:hsa:5931 UCSC:uc004cxt.3 GeneCards:GC0XM016772 HGNC:HGNC:9890
HPA:CAB037084 MIM:300825 neXtProt:NX_Q16576 PharmGKB:PA34254
PhylomeDB:Q16576 ChiTaRS:RBBP7 EvolutionaryTrace:Q16576
GenomeRNAi:5931 NextBio:23110 PMAP-CutDB:Q16576 ArrayExpress:Q16576
Bgee:Q16576 CleanEx:HS_RBBP7 Genevestigator:Q16576
GermOnline:ENSG00000102054 Uniprot:Q16576
Length = 425
Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 88/244 (36%), Positives = 127/244 (52%)
Query: 165 KVAHQGCVNRIRAMSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGHGAPQVLNQS 224
K+ H+G VNR R M QNPHI A+ + V V+D+ H A+ + +G P +
Sbjct: 119 KINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHP---AKPDP-SGECNPDL---- 170
Query: 225 PLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWN--VDPNP-FIGHAA 281
+ GH+ EGY + WN G L+S + + LW+ + VD F GH+A
Sbjct: 171 ---RLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSA 227
Query: 282 SVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSF--KAHNADVNVISWNRLASCL 339
VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N + +
Sbjct: 228 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFI 287
Query: 340 LASGSDDGTFSIHDLRLLKGGDSVVAH-FEYHKHPVTSIEWSPHEGSTLAVSSADNQLTI 398
LA+GS D T ++ DLR LK + H FE HK + + WSPH + LA S D +L +
Sbjct: 288 LATGSADKTVALWDLRNLK----LKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNV 343
Query: 399 WDLS 402
WDLS
Sbjct: 344 WDLS 347
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 85/249 (34%), Positives = 124/249 (49%)
Query: 224 SPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWN--VDPNP-FIGHA 280
+P ++ GH+ EGY + WN G L+S + + LW+ + VD F GH+
Sbjct: 167 NPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHS 226
Query: 281 ASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSF--KAHNADVNVISWNRLASC 338
A VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N +
Sbjct: 227 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEF 286
Query: 339 LLASGSDDGTFSIHDLRLLKGGDSVVAH-FEYHKHPVTSIEWSPHEGSTLAVSSADNQLT 397
+LA+GS D T ++ DLR LK + H FE HK + + WSPH + LA S D +L
Sbjct: 287 ILATGSADKTVALWDLRNLK----LKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLN 342
Query: 398 IWDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQK-DLKELHWHTQVPGMIVS 456
+WDLS + ED PP+LLFIH G + + W+ P +I S
Sbjct: 343 VWDLS-----------KIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICS 391
Query: 457 TAADGFNIL 465
+ D NI+
Sbjct: 392 VSED--NIM 398
Score = 146 (56.5 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 50/230 (21%), Positives = 97/230 (42%)
Query: 192 GHVQVWD--FRSHLNALAESETV------AGHGAPQVLNQSPLVKFGGHKDEGYAIDWNP 243
G+ W+ HL + ++ TV AG ++++ + F GH + W+
Sbjct: 179 GYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAI--FTGHSAVVEDVAWHL 236
Query: 244 VAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFI-GHAASVEDLQWSPTESDVFASCSVD 302
+ S + + +W+ S+ T P+ + H A V L ++P + A+ S D
Sbjct: 237 LHESLFGSVADDQKLMIWDTRSNTTSK--PSHLVDAHTAEVNCLSFNPYSEFILATGSAD 294
Query: 303 GNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLL----- 357
+A+WD R K L +F++H ++ + W+ +LAS D ++ DL +
Sbjct: 295 KTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQS 354
Query: 358 -----KGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLS 402
G ++ H ++ W+P+E + S DN + IW ++
Sbjct: 355 AEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 404
>UNIPROTKB|F1SQR0 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0070370 "cellular heat acclimation" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 KO:K11659 EMBL:CU463287 RefSeq:XP_003135004.1
ProteinModelPortal:F1SQR0 Ensembl:ENSSSCT00000013288
GeneID:100519001 KEGG:ssc:100519001 Uniprot:F1SQR0
Length = 425
Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 88/244 (36%), Positives = 127/244 (52%)
Query: 165 KVAHQGCVNRIRAMSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGHGAPQVLNQS 224
K+ H+G VNR R M QNPHI A+ + V V+D+ H A+ + +G P +
Sbjct: 119 KINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHP---AKPDP-SGECNPDL---- 170
Query: 225 PLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWN--VDPNP-FIGHAA 281
+ GH+ EGY + WN G L+S + + LW+ + VD F GH+A
Sbjct: 171 ---RLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSA 227
Query: 282 SVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSF--KAHNADVNVISWNRLASCL 339
VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N + +
Sbjct: 228 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFI 287
Query: 340 LASGSDDGTFSIHDLRLLKGGDSVVAH-FEYHKHPVTSIEWSPHEGSTLAVSSADNQLTI 398
LA+GS D T ++ DLR LK + H FE HK + + WSPH + LA S D +L +
Sbjct: 288 LATGSADKTVALWDLRNLK----LKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNV 343
Query: 399 WDLS 402
WDLS
Sbjct: 344 WDLS 347
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 85/249 (34%), Positives = 124/249 (49%)
Query: 224 SPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWN--VDPNP-FIGHA 280
+P ++ GH+ EGY + WN G L+S + + LW+ + VD F GH+
Sbjct: 167 NPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHS 226
Query: 281 ASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSF--KAHNADVNVISWNRLASC 338
A VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N +
Sbjct: 227 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEF 286
Query: 339 LLASGSDDGTFSIHDLRLLKGGDSVVAH-FEYHKHPVTSIEWSPHEGSTLAVSSADNQLT 397
+LA+GS D T ++ DLR LK + H FE HK + + WSPH + LA S D +L
Sbjct: 287 ILATGSADKTVALWDLRNLK----LKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLN 342
Query: 398 IWDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQK-DLKELHWHTQVPGMIVS 456
+WDLS + ED PP+LLFIH G + + W+ P +I S
Sbjct: 343 VWDLS-----------KIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICS 391
Query: 457 TAADGFNIL 465
+ D NI+
Sbjct: 392 VSED--NIM 398
Score = 146 (56.5 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 50/230 (21%), Positives = 97/230 (42%)
Query: 192 GHVQVWD--FRSHLNALAESETV------AGHGAPQVLNQSPLVKFGGHKDEGYAIDWNP 243
G+ W+ HL + ++ TV AG ++++ + F GH + W+
Sbjct: 179 GYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAI--FTGHSAVVEDVAWHL 236
Query: 244 VAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFI-GHAASVEDLQWSPTESDVFASCSVD 302
+ S + + +W+ S+ T P+ + H A V L ++P + A+ S D
Sbjct: 237 LHESLFGSVADDQKLMIWDTRSNTTSK--PSHLVDAHTAEVNCLSFNPYSEFILATGSAD 294
Query: 303 GNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLL----- 357
+A+WD R K L +F++H ++ + W+ +LAS D ++ DL +
Sbjct: 295 KTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQS 354
Query: 358 -----KGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLS 402
G ++ H ++ W+P+E + S DN + IW ++
Sbjct: 355 AEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 404
>UNIPROTKB|I3LV46 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OMA:DGFLLHV KO:K11659 EMBL:CU463287
GeneID:100519001 KEGG:ssc:100519001 RefSeq:XP_003360284.1
Ensembl:ENSSSCT00000024779 Uniprot:I3LV46
Length = 469
Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 88/244 (36%), Positives = 127/244 (52%)
Query: 165 KVAHQGCVNRIRAMSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGHGAPQVLNQS 224
K+ H+G VNR R M QNPHI A+ + V V+D+ H A+ + +G P +
Sbjct: 163 KINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHP---AKPDP-SGECNPDL---- 214
Query: 225 PLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWN--VDPNP-FIGHAA 281
+ GH+ EGY + WN G L+S + + LW+ + VD F GH+A
Sbjct: 215 ---RLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSA 271
Query: 282 SVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSF--KAHNADVNVISWNRLASCL 339
VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N + +
Sbjct: 272 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFI 331
Query: 340 LASGSDDGTFSIHDLRLLKGGDSVVAH-FEYHKHPVTSIEWSPHEGSTLAVSSADNQLTI 398
LA+GS D T ++ DLR LK + H FE HK + + WSPH + LA S D +L +
Sbjct: 332 LATGSADKTVALWDLRNLK----LKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNV 387
Query: 399 WDLS 402
WDLS
Sbjct: 388 WDLS 391
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 85/249 (34%), Positives = 124/249 (49%)
Query: 224 SPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWN--VDPNP-FIGHA 280
+P ++ GH+ EGY + WN G L+S + + LW+ + VD F GH+
Sbjct: 211 NPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHS 270
Query: 281 ASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSF--KAHNADVNVISWNRLASC 338
A VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N +
Sbjct: 271 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEF 330
Query: 339 LLASGSDDGTFSIHDLRLLKGGDSVVAH-FEYHKHPVTSIEWSPHEGSTLAVSSADNQLT 397
+LA+GS D T ++ DLR LK + H FE HK + + WSPH + LA S D +L
Sbjct: 331 ILATGSADKTVALWDLRNLK----LKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLN 386
Query: 398 IWDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQK-DLKELHWHTQVPGMIVS 456
+WDLS + ED PP+LLFIH G + + W+ P +I S
Sbjct: 387 VWDLS-----------KIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICS 435
Query: 457 TAADGFNIL 465
+ D NI+
Sbjct: 436 VSED--NIM 442
Score = 146 (56.5 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 50/230 (21%), Positives = 97/230 (42%)
Query: 192 GHVQVWD--FRSHLNALAESETV------AGHGAPQVLNQSPLVKFGGHKDEGYAIDWNP 243
G+ W+ HL + ++ TV AG ++++ + F GH + W+
Sbjct: 223 GYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAI--FTGHSAVVEDVAWHL 280
Query: 244 VAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFI-GHAASVEDLQWSPTESDVFASCSVD 302
+ S + + +W+ S+ T P+ + H A V L ++P + A+ S D
Sbjct: 281 LHESLFGSVADDQKLMIWDTRSNTTSK--PSHLVDAHTAEVNCLSFNPYSEFILATGSAD 338
Query: 303 GNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLL----- 357
+A+WD R K L +F++H ++ + W+ +LAS D ++ DL +
Sbjct: 339 KTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQS 398
Query: 358 -----KGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLS 402
G ++ H ++ W+P+E + S DN + IW ++
Sbjct: 399 AEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 448
>UNIPROTKB|K7GRD3 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GeneTree:ENSGT00570000079069 InterPro:IPR022052
Pfam:PF12265 EMBL:CU463287 Ensembl:ENSSSCT00000034836
Uniprot:K7GRD3
Length = 416
Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 88/244 (36%), Positives = 127/244 (52%)
Query: 165 KVAHQGCVNRIRAMSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGHGAPQVLNQS 224
K+ H+G VNR R M QNPHI A+ + V V+D+ H A+ + +G P +
Sbjct: 110 KINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHP---AKPDP-SGECNPDL---- 161
Query: 225 PLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWN--VDPNP-FIGHAA 281
+ GH+ EGY + WN G L+S + + LW+ + VD F GH+A
Sbjct: 162 ---RLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSA 218
Query: 282 SVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSF--KAHNADVNVISWNRLASCL 339
VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N + +
Sbjct: 219 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFI 278
Query: 340 LASGSDDGTFSIHDLRLLKGGDSVVAH-FEYHKHPVTSIEWSPHEGSTLAVSSADNQLTI 398
LA+GS D T ++ DLR LK + H FE HK + + WSPH + LA S D +L +
Sbjct: 279 LATGSADKTVALWDLRNLK----LKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNV 334
Query: 399 WDLS 402
WDLS
Sbjct: 335 WDLS 338
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 85/249 (34%), Positives = 124/249 (49%)
Query: 224 SPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWN--VDPNP-FIGHA 280
+P ++ GH+ EGY + WN G L+S + + LW+ + VD F GH+
Sbjct: 158 NPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHS 217
Query: 281 ASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSF--KAHNADVNVISWNRLASC 338
A VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N +
Sbjct: 218 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEF 277
Query: 339 LLASGSDDGTFSIHDLRLLKGGDSVVAH-FEYHKHPVTSIEWSPHEGSTLAVSSADNQLT 397
+LA+GS D T ++ DLR LK + H FE HK + + WSPH + LA S D +L
Sbjct: 278 ILATGSADKTVALWDLRNLK----LKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLN 333
Query: 398 IWDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQK-DLKELHWHTQVPGMIVS 456
+WDLS + ED PP+LLFIH G + + W+ P +I S
Sbjct: 334 VWDLS-----------KIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICS 382
Query: 457 TAADGFNIL 465
+ D NI+
Sbjct: 383 VSED--NIM 389
Score = 146 (56.5 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 50/230 (21%), Positives = 97/230 (42%)
Query: 192 GHVQVWD--FRSHLNALAESETV------AGHGAPQVLNQSPLVKFGGHKDEGYAIDWNP 243
G+ W+ HL + ++ TV AG ++++ + F GH + W+
Sbjct: 170 GYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAI--FTGHSAVVEDVAWHL 227
Query: 244 VAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFI-GHAASVEDLQWSPTESDVFASCSVD 302
+ S + + +W+ S+ T P+ + H A V L ++P + A+ S D
Sbjct: 228 LHESLFGSVADDQKLMIWDTRSNTTSK--PSHLVDAHTAEVNCLSFNPYSEFILATGSAD 285
Query: 303 GNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLL----- 357
+A+WD R K L +F++H ++ + W+ +LAS D ++ DL +
Sbjct: 286 KTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQS 345
Query: 358 -----KGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLS 402
G ++ H ++ W+P+E + S DN + IW ++
Sbjct: 346 AEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 395
>UNIPROTKB|Q4R304 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9541
"Macaca fascicularis" [GO:0016581 "NuRD complex" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular
heat acclimation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOVERGEN:HBG053236
EMBL:AB179464 ProteinModelPortal:Q4R304 SMR:Q4R304 PRIDE:Q4R304
Uniprot:Q4R304
Length = 425
Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 88/244 (36%), Positives = 127/244 (52%)
Query: 165 KVAHQGCVNRIRAMSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGHGAPQVLNQS 224
K+ H+G VNR R M QNPHI A+ + V V+D+ H A+ + +G P +
Sbjct: 119 KINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHP---AKPDP-SGECNPDL---- 170
Query: 225 PLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWN--VDPNP-FIGHAA 281
+ GH+ EGY + WN G L+S + + LW+ + VD F GH+A
Sbjct: 171 ---RLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSA 227
Query: 282 SVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSF--KAHNADVNVISWNRLASCL 339
VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N + +
Sbjct: 228 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFI 287
Query: 340 LASGSDDGTFSIHDLRLLKGGDSVVAH-FEYHKHPVTSIEWSPHEGSTLAVSSADNQLTI 398
LA+GS D T ++ DLR LK + H FE HK + + WSPH + LA S D +L +
Sbjct: 288 LATGSADKTVALWDLRNLK----LKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNV 343
Query: 399 WDLS 402
WDLS
Sbjct: 344 WDLS 347
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 85/249 (34%), Positives = 124/249 (49%)
Query: 224 SPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWN--VDPNP-FIGHA 280
+P ++ GH+ EGY + WN G L+S + + LW+ + VD F GH+
Sbjct: 167 NPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHS 226
Query: 281 ASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSF--KAHNADVNVISWNRLASC 338
A VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N +
Sbjct: 227 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEF 286
Query: 339 LLASGSDDGTFSIHDLRLLKGGDSVVAH-FEYHKHPVTSIEWSPHEGSTLAVSSADNQLT 397
+LA+GS D T ++ DLR LK + H FE HK + + WSPH + LA S D +L
Sbjct: 287 ILATGSADKTVALWDLRNLK----LKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLN 342
Query: 398 IWDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQK-DLKELHWHTQVPGMIVS 456
+WDLS + ED PP+LLFIH G + + W+ P +I S
Sbjct: 343 VWDLS-----------KIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICS 391
Query: 457 TAADGFNIL 465
+ D NI+
Sbjct: 392 VSED--NIM 398
Score = 146 (56.5 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 50/230 (21%), Positives = 97/230 (42%)
Query: 192 GHVQVWD--FRSHLNALAESETV------AGHGAPQVLNQSPLVKFGGHKDEGYAIDWNP 243
G+ W+ HL + ++ TV AG ++++ + F GH + W+
Sbjct: 179 GYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAI--FTGHSAVVEDVAWHL 236
Query: 244 VAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFI-GHAASVEDLQWSPTESDVFASCSVD 302
+ S + + +W+ S+ T P+ + H A V L ++P + A+ S D
Sbjct: 237 LHESLFGSVADDQKLMIWDTRSNTTSK--PSHLVDAHTAEVNCLSFNPYSEFILATGSAD 294
Query: 303 GNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLL----- 357
+A+WD R K L +F++H ++ + W+ +LAS D ++ DL +
Sbjct: 295 KTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQS 354
Query: 358 -----KGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLS 402
G ++ H ++ W+P+E + S DN + IW ++
Sbjct: 355 AEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 404
>MGI|MGI:1194910 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016581
"NuRD complex" evidence=ISO;IDA] [GO:0030308 "negative regulation
of cell growth" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0070370 "cellular heat
acclimation" evidence=ISO;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1194910 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
GO:GO:0035098 GeneTree:ENSGT00570000079069 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35142
EMBL:AK076016 EMBL:AK135779 EMBL:AK135956 EMBL:AK136110
EMBL:AK145531 EMBL:AK145651 EMBL:AK146014 EMBL:AK146904
EMBL:AK146967 EMBL:AK147062 EMBL:AK148852 EMBL:AK153913
EMBL:AK160023 EMBL:AL672123 EMBL:BC003785 IPI:IPI00122698
PIR:I49367 RefSeq:NP_033057.3 UniGene:Mm.270186 UniGene:Mm.486181
ProteinModelPortal:Q60973 SMR:Q60973 IntAct:Q60973 STRING:Q60973
PhosphoSite:Q60973 REPRODUCTION-2DPAGE:Q60973 PaxDb:Q60973
PRIDE:Q60973 Ensembl:ENSMUST00000033720 GeneID:245688
KEGG:mmu:245688 InParanoid:A2AFJ0 NextBio:386918 Bgee:Q60973
CleanEx:MM_RBBP7 Genevestigator:Q60973
GermOnline:ENSMUSG00000031353 Uniprot:Q60973
Length = 425
Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 88/244 (36%), Positives = 127/244 (52%)
Query: 165 KVAHQGCVNRIRAMSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGHGAPQVLNQS 224
K+ H+G VNR R M QNPHI A+ + V V+D+ H A+ + +G P +
Sbjct: 119 KINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHP---AKPDP-SGECNPDL---- 170
Query: 225 PLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWN--VDPNP-FIGHAA 281
+ GH+ EGY + WN G L+S + + LW+ + VD F GH+A
Sbjct: 171 ---RLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSA 227
Query: 282 SVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSF--KAHNADVNVISWNRLASCL 339
VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N + +
Sbjct: 228 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFI 287
Query: 340 LASGSDDGTFSIHDLRLLKGGDSVVAH-FEYHKHPVTSIEWSPHEGSTLAVSSADNQLTI 398
LA+GS D T ++ DLR LK + H FE HK + + WSPH + LA S D +L +
Sbjct: 288 LATGSADKTVALWDLRNLK----LKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNV 343
Query: 399 WDLS 402
WDLS
Sbjct: 344 WDLS 347
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 85/249 (34%), Positives = 124/249 (49%)
Query: 224 SPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWN--VDPNP-FIGHA 280
+P ++ GH+ EGY + WN G L+S + + LW+ + VD F GH+
Sbjct: 167 NPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHS 226
Query: 281 ASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSF--KAHNADVNVISWNRLASC 338
A VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N +
Sbjct: 227 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEF 286
Query: 339 LLASGSDDGTFSIHDLRLLKGGDSVVAH-FEYHKHPVTSIEWSPHEGSTLAVSSADNQLT 397
+LA+GS D T ++ DLR LK + H FE HK + + WSPH + LA S D +L
Sbjct: 287 ILATGSADKTVALWDLRNLK----LKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLN 342
Query: 398 IWDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQK-DLKELHWHTQVPGMIVS 456
+WDLS + ED PP+LLFIH G + + W+ P +I S
Sbjct: 343 VWDLS-----------KIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICS 391
Query: 457 TAADGFNIL 465
+ D NI+
Sbjct: 392 VSED--NIM 398
Score = 146 (56.5 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 50/230 (21%), Positives = 97/230 (42%)
Query: 192 GHVQVWD--FRSHLNALAESETV------AGHGAPQVLNQSPLVKFGGHKDEGYAIDWNP 243
G+ W+ HL + ++ TV AG ++++ + F GH + W+
Sbjct: 179 GYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAI--FTGHSAVVEDVAWHL 236
Query: 244 VAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFI-GHAASVEDLQWSPTESDVFASCSVD 302
+ S + + +W+ S+ T P+ + H A V L ++P + A+ S D
Sbjct: 237 LHESLFGSVADDQKLMIWDTRSNTTSK--PSHLVDAHTAEVNCLSFNPYSEFILATGSAD 294
Query: 303 GNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLL----- 357
+A+WD R K L +F++H ++ + W+ +LAS D ++ DL +
Sbjct: 295 KTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQS 354
Query: 358 -----KGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLS 402
G ++ H ++ W+P+E + S DN + IW ++
Sbjct: 355 AEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 404
>RGD|620125 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISO;ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISO;ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0070370 "cellular heat acclimation" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:620125 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931
KO:K11659 EMBL:AF090306 EMBL:BC062012 IPI:IPI00194285
RefSeq:NP_114004.1 UniGene:Rn.3600 ProteinModelPortal:Q71UF4
SMR:Q71UF4 STRING:Q71UF4 PRIDE:Q71UF4 Ensembl:ENSRNOT00000066676
GeneID:83712 KEGG:rno:83712 UCSC:RGD:620125 InParanoid:Q71UF4
NextBio:616281 ArrayExpress:Q71UF4 Genevestigator:Q71UF4
GermOnline:ENSRNOG00000005157 Uniprot:Q71UF4
Length = 425
Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 88/244 (36%), Positives = 127/244 (52%)
Query: 165 KVAHQGCVNRIRAMSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGHGAPQVLNQS 224
K+ H+G VNR R M QNPHI A+ + V V+D+ H A+ + +G P +
Sbjct: 119 KINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHP---AKPDP-SGECNPDL---- 170
Query: 225 PLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWN--VDPNP-FIGHAA 281
+ GH+ EGY + WN G L+S + + LW+ + VD F GH+A
Sbjct: 171 ---RLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSA 227
Query: 282 SVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSF--KAHNADVNVISWNRLASCL 339
VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N + +
Sbjct: 228 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFI 287
Query: 340 LASGSDDGTFSIHDLRLLKGGDSVVAH-FEYHKHPVTSIEWSPHEGSTLAVSSADNQLTI 398
LA+GS D T ++ DLR LK + H FE HK + + WSPH + LA S D +L +
Sbjct: 288 LATGSADKTVALWDLRNLK----LKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNV 343
Query: 399 WDLS 402
WDLS
Sbjct: 344 WDLS 347
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 85/249 (34%), Positives = 124/249 (49%)
Query: 224 SPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWN--VDPNP-FIGHA 280
+P ++ GH+ EGY + WN G L+S + + LW+ + VD F GH+
Sbjct: 167 NPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHS 226
Query: 281 ASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSF--KAHNADVNVISWNRLASC 338
A VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N +
Sbjct: 227 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEF 286
Query: 339 LLASGSDDGTFSIHDLRLLKGGDSVVAH-FEYHKHPVTSIEWSPHEGSTLAVSSADNQLT 397
+LA+GS D T ++ DLR LK + H FE HK + + WSPH + LA S D +L
Sbjct: 287 ILATGSADKTVALWDLRNLK----LKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLN 342
Query: 398 IWDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQK-DLKELHWHTQVPGMIVS 456
+WDLS + ED PP+LLFIH G + + W+ P +I S
Sbjct: 343 VWDLS-----------KIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICS 391
Query: 457 TAADGFNIL 465
+ D NI+
Sbjct: 392 VSED--NIM 398
Score = 146 (56.5 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 50/230 (21%), Positives = 97/230 (42%)
Query: 192 GHVQVWD--FRSHLNALAESETV------AGHGAPQVLNQSPLVKFGGHKDEGYAIDWNP 243
G+ W+ HL + ++ TV AG ++++ + F GH + W+
Sbjct: 179 GYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAI--FTGHSAVVEDVAWHL 236
Query: 244 VAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFI-GHAASVEDLQWSPTESDVFASCSVD 302
+ S + + +W+ S+ T P+ + H A V L ++P + A+ S D
Sbjct: 237 LHESLFGSVADDQKLMIWDTRSNTTSK--PSHLVDAHTAEVNCLSFNPYSEFILATGSAD 294
Query: 303 GNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLL----- 357
+A+WD R K L +F++H ++ + W+ +LAS D ++ DL +
Sbjct: 295 KTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQS 354
Query: 358 -----KGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLS 402
G ++ H ++ W+P+E + S DN + IW ++
Sbjct: 355 AEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 404
>UNIPROTKB|Q9I8G9 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0070370
"cellular heat acclimation" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0016581 "NuRD complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:AF279275 IPI:IPI00594478
PIR:JC7558 RefSeq:NP_990001.1 UniGene:Gga.202
ProteinModelPortal:Q9I8G9 SMR:Q9I8G9 STRING:Q9I8G9 PRIDE:Q9I8G9
Ensembl:ENSGALT00000026698 GeneID:395390 KEGG:gga:395390
InParanoid:Q9I8G9 NextBio:20815474 Uniprot:Q9I8G9
Length = 424
Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 86/244 (35%), Positives = 125/244 (51%)
Query: 165 KVAHQGCVNRIRAMSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGHGAPQVLNQS 224
K+ H+G VNR R M QNP+I A+ + V V+D+ H +G P +
Sbjct: 118 KINHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKH----PSKPDPSGECNPDL---- 169
Query: 225 PLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWN--VDPNP-FIGHAA 281
+ GH+ EGY + WN G L+S + + LW+ ++ VD F GH+A
Sbjct: 170 ---RLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSA 226
Query: 282 SVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFK--AHNADVNVISWNRLASCL 339
VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N + +
Sbjct: 227 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFI 286
Query: 340 LASGSDDGTFSIHDLRLLKGGDSVVAH-FEYHKHPVTSIEWSPHEGSTLAVSSADNQLTI 398
LA+GS D T ++ DLR LK + H FE HK + + WSPH + LA S D +L +
Sbjct: 287 LATGSADKTVALWDLRNLK----LKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNV 342
Query: 399 WDLS 402
WDLS
Sbjct: 343 WDLS 346
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 85/249 (34%), Positives = 125/249 (50%)
Query: 224 SPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWN--VDPNP-FIGHA 280
+P ++ GH+ EGY + WN G L+S + + LW+ ++ VD F GH+
Sbjct: 166 NPDLRLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHS 225
Query: 281 ASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFK--AHNADVNVISWNRLASC 338
A VED+ W +F S + D + IWDTR ++ S AH A+VN +S+N +
Sbjct: 226 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEF 285
Query: 339 LLASGSDDGTFSIHDLRLLKGGDSVVAH-FEYHKHPVTSIEWSPHEGSTLAVSSADNQLT 397
+LA+GS D T ++ DLR LK + H FE HK + + WSPH + LA S D +L
Sbjct: 286 ILATGSADKTVALWDLRNLK----LKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLN 341
Query: 398 IWDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQK-DLKELHWHTQVPGMIVS 456
+WDLS + ED PP+LLFIH G + + W+ P +I S
Sbjct: 342 VWDLS-----------KIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICS 390
Query: 457 TAADGFNIL 465
+ D NI+
Sbjct: 391 VSED--NIM 397
Score = 150 (57.9 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 51/230 (22%), Positives = 98/230 (42%)
Query: 192 GHVQVWD--FRSHLNALAESETV------AGHGAPQVLNQSPLVKFGGHKDEGYAIDWNP 243
G+ W+ + HL + ++ TV AG ++++ + F GH + W+
Sbjct: 178 GYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAI--FTGHSAVVEDVAWHL 235
Query: 244 VAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFI-GHAASVEDLQWSPTESDVFASCSVD 302
+ S + + +W+ S+ T P+ + H A V L ++P + A+ S D
Sbjct: 236 LHESLFGSVADDQKLMIWDTRSNTTSK--PSHSVDAHTAEVNCLSFNPYSEFILATGSAD 293
Query: 303 GNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLL----- 357
+A+WD R K L SF++H ++ + W+ +LAS D ++ DL +
Sbjct: 294 KTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQS 353
Query: 358 -----KGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLS 402
G ++ H ++ W+P+E + S DN + IW ++
Sbjct: 354 AEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 403
>TAIR|locus:2059856 [details] [associations]
symbol:MSI2 "AT2G16780" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006260
"DNA replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0007067 "mitosis" evidence=RCA] [GO:0007129
"synapsis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0008283 "cell proliferation"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] [GO:0010564 "regulation of cell cycle process"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 EMBL:AC005825 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
ProtClustDB:CLSN2683757 EMBL:AF016847 EMBL:AY056814 IPI:IPI00526379
PIR:B84544 RefSeq:NP_179269.1 UniGene:At.25135
ProteinModelPortal:O22468 SMR:O22468 STRING:O22468 PaxDb:O22468
PRIDE:O22468 EnsemblPlants:AT2G16780.1 GeneID:816179
KEGG:ath:AT2G16780 GeneFarm:2815 TAIR:At2g16780 InParanoid:O22468
OMA:EVNYLSF PhylomeDB:O22468 Genevestigator:O22468
GermOnline:AT2G16780 Uniprot:O22468
Length = 415
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 92/306 (30%), Positives = 146/306 (47%)
Query: 159 PILQLR-KVAHQGCVNRIRAMSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGHGA 217
P +++R ++ G VNR R M Q P + + V ++D+ H A+S+T
Sbjct: 105 PKVEIRQRIRVDGEVNRARCMPQKPTLVGAKTSGCEVFLFDYAKHA---AKSQTS----- 156
Query: 218 PQVLNQSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFI 277
P ++ GH EGY + W+P G L+SG + I LW+ ++ V F+
Sbjct: 157 ----ECDPDLRLVGHDKEGYGLSWSPFKEGYLLSGSQDQKICLWDVSATPQDKVLNAMFV 212
Query: 278 --GHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRL 335
GH +++ D+ W ++F S DG + IWDTR + K H +VN +S+N
Sbjct: 213 YEGHESAIADVSWHMKNENLFGSAGEDGRLVIWDTRTNQMQ-HQVKVHEREVNYLSFNPF 271
Query: 336 ASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQ 395
+LA+ S D T ++ DLR L V++ H+ V +EW P+ + LA S D +
Sbjct: 272 NEWVLATASSDSTVALFDLRKLNAPLHVMSS---HEGEVFQVEWDPNHETVLASSGEDRR 328
Query: 396 LTIWDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQK-DLKELHWHTQVPGMI 454
L +WDL+ +++A ED PP+LLF H G K + + W+ P +I
Sbjct: 329 LMVWDLNRVGEEQLEI--------ELDA-EDGPPELLFSHGGHKAKISDFAWNKNEPWVI 379
Query: 455 VSTAAD 460
S A D
Sbjct: 380 ASVAED 385
>UNIPROTKB|Q5R654 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9601
"Pongo abelii" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular heat
acclimation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0035098 GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 HOVERGEN:HBG053236 EMBL:CR860642 UniGene:Pab.19680
ProteinModelPortal:Q5R654 InParanoid:Q5R654 Uniprot:Q5R654
Length = 426
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 87/245 (35%), Positives = 127/245 (51%)
Query: 165 KVAHQGCVNRIRAMSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGHGAPQVLNQS 224
K+ H+G VNR R M QNPHI A+ + V V+D+ H A+ + +G P +
Sbjct: 119 KINHEGEVNRARYMPQNPHIIATKTPSSGVLVFDYTKHP---AKPDP-SGECNPDL---- 170
Query: 225 PLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWN--VDPNP-FIGHAA 281
+ GH+ EGY + WN G L+S + + LW+ + VD F GH+A
Sbjct: 171 ---RLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAVFTGHSA 227
Query: 282 SVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSF--KAHNADVNVISWNRLASCL 339
VED+ W +F S + D + +WDTR ++ S AH A+VN +S+N + +
Sbjct: 228 VVEDVAWHLLHESLFGSVADDQKLMMWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFI 287
Query: 340 LASGSDDGTFSIHDLRLLKGGDSVVAH-FEYHKHPVTSI-EWSPHEGSTLAVSSADNQLT 397
LA+GS D T ++ DLR LK + H FE HK + + WSPH + LA S D +L
Sbjct: 288 LATGSADKTVALWDLRNLK----LKLHTFESHKDEIFQVVHWSPHNETILASSGTDRRLN 343
Query: 398 IWDLS 402
+WDLS
Sbjct: 344 VWDLS 348
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 84/250 (33%), Positives = 124/250 (49%)
Query: 224 SPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWN--VDPNP-FIGHA 280
+P ++ GH+ EGY + WN G L+S + + LW+ + VD F GH+
Sbjct: 167 NPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAVFTGHS 226
Query: 281 ASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSF--KAHNADVNVISWNRLASC 338
A VED+ W +F S + D + +WDTR ++ S AH A+VN +S+N +
Sbjct: 227 AVVEDVAWHLLHESLFGSVADDQKLMMWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEF 286
Query: 339 LLASGSDDGTFSIHDLRLLKGGDSVVAH-FEYHKHPVTSI-EWSPHEGSTLAVSSADNQL 396
+LA+GS D T ++ DLR LK + H FE HK + + WSPH + LA S D +L
Sbjct: 287 ILATGSADKTVALWDLRNLK----LKLHTFESHKDEIFQVVHWSPHNETILASSGTDRRL 342
Query: 397 TIWDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQK-DLKELHWHTQVPGMIV 455
+WDLS + ED PP+LLFIH G + + W+ P +I
Sbjct: 343 NVWDLS-----------KIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 391
Query: 456 STAADGFNIL 465
S + D NI+
Sbjct: 392 SVSED--NIM 399
Score = 145 (56.1 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 43/186 (23%), Positives = 80/186 (43%)
Query: 229 FGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFI-GHAASVEDLQ 287
F GH + W+ + S + + +W+ S+ T P+ + H A V L
Sbjct: 222 FTGHSAVVEDVAWHLLHESLFGSVADDQKLMMWDTRSNTTSK--PSHLVDAHTAEVNCLS 279
Query: 288 WSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADV-NVISWNRLASCLLASGSDD 346
++P + A+ S D +A+WD R K L +F++H ++ V+ W+ +LAS D
Sbjct: 280 FNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVVHWSPHNETILASSGTD 339
Query: 347 GTFSIHDLRLL----------KGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQL 396
++ DL + G ++ H ++ W+P+E + S DN +
Sbjct: 340 RRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIM 399
Query: 397 TIWDLS 402
IW ++
Sbjct: 400 QIWQMA 405
>TAIR|locus:2131551 [details] [associations]
symbol:MSI3 "MULTICOPY SUPPRESSOR OF IRA1 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=IPI] [GO:0000278 "mitotic cell
cycle" evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] [GO:0009560 "embryo sac
egg cell differentiation" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010074 "maintenance of meristem
identity" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0016567 "protein
ubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0050826 "response to freezing" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 EMBL:AL022023 EMBL:AL161586 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
OMA:VLYDLVI ProtClustDB:CLSN2683757 EMBL:AF016848 IPI:IPI00525720
PIR:T05775 RefSeq:NP_195231.1 UniGene:At.2099
ProteinModelPortal:O22469 SMR:O22469 IntAct:O22469 STRING:O22469
PaxDb:O22469 PRIDE:O22469 EnsemblPlants:AT4G35050.1 GeneID:829657
KEGG:ath:AT4G35050 GeneFarm:2817 TAIR:At4g35050 InParanoid:O22469
PhylomeDB:O22469 Genevestigator:O22469 GermOnline:AT4G35050
Uniprot:O22469
Length = 424
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 90/306 (29%), Positives = 148/306 (48%)
Query: 159 PILQLR-KVAHQGCVNRIRAMSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGHGA 217
P ++++ K+ G VNR R M Q P + + V ++D+ + L+ G
Sbjct: 106 PKVEIKQKIRVDGEVNRARCMPQKPTLVGAKTSGSEVFLFDY-ARLS-----------GK 153
Query: 218 PQVLNQSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNV-DP-NP 275
PQ P ++ GH+ EGY + W+ G L+SG + I LW+ ++ AT V +P +
Sbjct: 154 PQTSECDPDLRLMGHEQEGYGLAWSSFKEGYLLSGSQDQRICLWDVSATATDKVLNPMHV 213
Query: 276 FIGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRL 335
+ GH + +ED+ W ++F S D + IWD R + K H ++N +S+N
Sbjct: 214 YEGHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRTNQMQ-HQVKVHEREINYLSFNPF 272
Query: 336 ASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQ 395
+LA+ S D T ++ DLR L V++ H+ V +EW P+ + LA S D +
Sbjct: 273 NEWVLATASSDSTVALFDLRKLTAPLHVLSK---HEGEVFQVEWDPNHETVLASSGEDRR 329
Query: 396 LTIWDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQK-DLKELHWHTQVPGMI 454
L +WD++ +++A ED PP+LLF H G K + + W+ P +I
Sbjct: 330 LMVWDINRVGDEQLEI--------ELDA-EDGPPELLFSHGGHKAKISDFAWNKDEPWVI 380
Query: 455 VSTAAD 460
S A D
Sbjct: 381 SSVAED 386
>TAIR|locus:2161253 [details] [associations]
symbol:MSI1 "MULTICOPY SUPRESSOR OF IRA1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0016568 "chromatin modification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0043234 "protein complex"
evidence=IPI] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=IMP]
[GO:0031507 "heterochromatin assembly" evidence=RCA;IMP]
[GO:0009909 "regulation of flower development" evidence=RCA;IMP]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0010026
"trichome differentiation" evidence=IMP] [GO:0048366 "leaf
development" evidence=IMP] [GO:0010214 "seed coat development"
evidence=IMP] [GO:0048316 "seed development" evidence=IMP]
[GO:0009555 "pollen development" evidence=IGI;IMP] [GO:0045787
"positive regulation of cell cycle" evidence=IGI;RCA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IPI]
[GO:0006275 "regulation of DNA replication" evidence=RCA]
[GO:0009965 "leaf morphogenesis" evidence=RCA] [GO:0010389
"regulation of G2/M transition of mitotic cell cycle" evidence=RCA]
[GO:0016570 "histone modification" evidence=RCA] [GO:0048449
"floral organ formation" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009555 GO:GO:0010214 GO:GO:0008283
GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 EMBL:AB019228 GO:GO:0009793 GO:GO:0009908
GO:GO:0048366 GO:GO:0009909 GO:GO:0006349 GO:GO:0016585
GO:GO:0045787 GO:GO:0031507 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0080008 GO:GO:0010026 HOGENOM:HOG000160330
OMA:DGFLLHV EMBL:AF016846 EMBL:AY059874 EMBL:AY114646
IPI:IPI00535841 RefSeq:NP_200631.1 UniGene:At.49185
UniGene:At.66738 ProteinModelPortal:O22467 SMR:O22467
DIP:DIP-33481N IntAct:O22467 STRING:O22467 PaxDb:O22467
PRIDE:O22467 EnsemblPlants:AT5G58230.1 GeneID:835935
KEGG:ath:AT5G58230 GeneFarm:2813 TAIR:At5g58230 InParanoid:O22467
PhylomeDB:O22467 ProtClustDB:CLSN2683757 Genevestigator:O22467
GermOnline:AT5G58230 Uniprot:O22467
Length = 424
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 98/309 (31%), Positives = 144/309 (46%)
Query: 163 LRKVAHQGCVNRIRAMSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGHGAPQVLN 222
++++ H G VNR R M QNP I A+ V V+D+ H S+ GA
Sbjct: 119 IQQINHDGEVNRARYMPQNPFIIATKTVNAEVYVFDYSKH-----PSKPPLD-GAC---- 168
Query: 223 QSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWE-PASDATWNVDPNP-FIGHA 280
+P +K GH EGY + W+ G L+SG ++ I LW+ A+ ++D F H
Sbjct: 169 -NPDLKLRGHSSEGYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIFKAHE 227
Query: 281 ASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSA--LMSFKAHNADVNVISWNRLASC 338
VED+ W +F S D + IWD R ++ + S AH+ +VN +++N
Sbjct: 228 GVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEW 287
Query: 339 LLASGSDDGTFSIHDLRLLKGGDSVVAH-FEYHKHPVTSIEWSPHEGSTLAVSSADNQLT 397
++A+GS D T + DLR L S H F+ HK V + W+P + LA +L
Sbjct: 288 VVATGSTDKTVKLFDLRKL----STALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLM 343
Query: 398 IWDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQKD-LKELHWHTQVPGMIVS 456
+WDLS + V ED PP+LLFIH G + + W+ +I S
Sbjct: 344 VWDLS-----------RIDEEQTVEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISS 392
Query: 457 TAADGFNIL 465
A D NIL
Sbjct: 393 VAED--NIL 399
>POMBASE|SPCC1672.10 [details] [associations]
symbol:mis16 "kinetochore protein Mis16" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0000778 "condensed nuclear
chromosome kinetochore" evidence=IDA] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006995 "cellular response to nitrogen starvation"
evidence=IMP] [GO:0016575 "histone deacetylation" evidence=IMP]
[GO:0031055 "chromatin remodeling at centromere" evidence=IMP]
[GO:0031066 "regulation of histone deacetylation at centromere"
evidence=IMP] [GO:0031511 "Mis6-Sim4 complex" evidence=TAS]
[GO:0034501 "protein localization to kinetochore" evidence=IMP]
[GO:0051382 "kinetochore assembly" evidence=TAS] [GO:0070317
"negative regulation of G0 to G1 transition" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPCC1672.10 GO:GO:0005829 GO:GO:0070317 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000790 GO:GO:0000070
GO:GO:0000778 GO:GO:0034501 GO:GO:0006995 GO:GO:0051382
GO:GO:0016575 KO:K10752 InterPro:IPR022052 Pfam:PF12265 PIR:T41054
RefSeq:NP_587881.1 ProteinModelPortal:O94244 SMR:O94244
IntAct:O94244 STRING:O94244 PRIDE:O94244 EnsemblFungi:SPCC1672.10.1
GeneID:2539214 KEGG:spo:SPCC1672.10 HOGENOM:HOG000160330
OMA:NSCIIAT OrthoDB:EOG412QFD NextBio:20800384 GO:GO:0031511
GO:GO:0031055 GO:GO:0031066 Uniprot:O94244
Length = 430
Score = 313 (115.2 bits), Expect = 8.3e-28, P = 8.3e-28
Identities = 100/317 (31%), Positives = 145/317 (45%)
Query: 164 RKVAHQGCVNRIRAMSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGHGAPQVLNQ 223
+K+ H G VNR R M Q P I A+ + G+ ++D H +AL E + PQ +
Sbjct: 126 QKIPHDGDVNRARYMPQKPEIIATMGEGGNAYIFDTTCH-DALTTGEAL-----PQAV-- 177
Query: 224 SPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEP-----ASDATWNVDP-NPFI 277
+K GH EG+ + WNP PG L +G + I LW+ S T + P +
Sbjct: 178 ---LK--GHTAEGFGLCWNPNLPGNLATGAEDQVICLWDVQTQSFTSSETKVISPIAKYH 232
Query: 278 GHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVG--KSALMSFKAHNADVNVISWNRL 335
H V D+Q+ P + AS S D + I DTR+ + A +AH+ +N ++ N
Sbjct: 233 RHTDIVNDVQFHPQHEALLASVSDDCTLQIHDTRLNPEEEAPKVIQAHSKAINAVAINPF 292
Query: 336 ASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQ 395
LLA+ S D T ++ DLR + E H+ V +EWSPH+ LA SS D +
Sbjct: 293 NDYLLATASADKTVALWDLR---NPYQRLHTLEGHEDEVYGLEWSPHDEPILASSSTDRR 349
Query: 396 LTIWDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQKD-LKELHWHTQVPGMI 454
+ IWDL T E ED P+LLF+H G + + E W ++
Sbjct: 350 VCIWDLE--------KIGEEQTPEDA---EDGSPELLFMHGGHTNRISEFSWCPNERWVV 398
Query: 455 VSTAADGF-NILMPSNI 470
S A D I PS +
Sbjct: 399 GSLADDNILQIWSPSRV 415
>WB|WBGene00004312 [details] [associations]
symbol:rba-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0001703 "gastrulation with
mouth forming first" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0045138 "tail tip
morphogenesis" evidence=IMP] [GO:0001708 "cell fate specification"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0001708 GO:GO:0009792 GO:GO:0006915
GO:GO:0016246 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0006351
GO:GO:0016568 GO:GO:0040035 GO:GO:0045138
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0001703 HOGENOM:HOG000160330 EMBL:Z81097
OMA:MPDVTKT PIR:T23385 RefSeq:NP_492551.1 ProteinModelPortal:P90917
SMR:P90917 STRING:P90917 PaxDb:P90917 EnsemblMetazoa:K07A1.11.1
EnsemblMetazoa:K07A1.11.2 GeneID:172801 KEGG:cel:CELE_K07A1.11
UCSC:K07A1.11 CTD:172801 WormBase:K07A1.11 InParanoid:P90917
NextBio:877059 Uniprot:P90917
Length = 412
Score = 289 (106.8 bits), Expect = 4.6e-24, P = 4.6e-24
Identities = 73/242 (30%), Positives = 123/242 (50%)
Query: 165 KVAHQGCVNRIRAMSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGHGAPQVLNQS 224
K+ H G V+R R M NP I AS + V ++D+ H SE P+
Sbjct: 115 KINHPGEVHRARYMPHNPFIIASRGPSDDVYIFDYTKH-----PSE-------PKDTKFR 162
Query: 225 PLVKFGGHKDEGYAIDWNPVAPGRLVS-GDCNSCIHLWEPASDATWN---VDPNPFIGHA 280
P ++ GH+ EGY + W+ G L++ GD H W+ ++ T + V + F GH+
Sbjct: 163 PQLRLKGHEGEGYGMSWSNTREGHLLTAGDDGMICH-WDINANQTISGQIVPQSKFKGHS 221
Query: 281 ASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLL 340
++ ED+ + + VF S D + +WD R K L + H A+VN I++N + +L
Sbjct: 222 SNAEDVSFHALHNFVFGSVGDDRKLNLWDLRQSKPQLTAV-GHTAEVNCITFNPFSEYIL 280
Query: 341 ASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWD 400
A+GS D T ++ D+R ++ + H H + + +SPH + LA S +D+++ +WD
Sbjct: 281 ATGSVDKTVALWDMRNMRKKMYTLKH---HNDEIFQVSFSPHYETVLASSGSDDRVIVWD 337
Query: 401 LS 402
+S
Sbjct: 338 IS 339
Score = 282 (104.3 bits), Expect = 4.5e-23, P = 4.5e-23
Identities = 70/255 (27%), Positives = 125/255 (49%)
Query: 225 PLVKFGGHKDEGYAIDWNPVAPGRLVS-GDCNSCIHLWEPASDATWN---VDPNPFIGHA 280
P ++ GH+ EGY + W+ G L++ GD H W+ ++ T + V + F GH+
Sbjct: 163 PQLRLKGHEGEGYGMSWSNTREGHLLTAGDDGMICH-WDINANQTISGQIVPQSKFKGHS 221
Query: 281 ASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLL 340
++ ED+ + + VF S D + +WD R K L + H A+VN I++N + +L
Sbjct: 222 SNAEDVSFHALHNFVFGSVGDDRKLNLWDLRQSKPQLTAV-GHTAEVNCITFNPFSEYIL 280
Query: 341 ASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWD 400
A+GS D T ++ D+R ++ + H H + + +SPH + LA S +D+++ +WD
Sbjct: 281 ATGSVDKTVALWDMRNMRKKMYTLKH---HNDEIFQVSFSPHYETVLASSGSDDRVIVWD 337
Query: 401 LSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQKD-LKELHWHTQVPGMIVSTAA 459
+S + +PP+++FIH G + + W+ P I S+
Sbjct: 338 ISKIQDPSSSSAASS---------DSVPPEVIFIHAGHTGKVADFSWNPNRPWTICSS-- 386
Query: 460 DGFNILMPSNIQSTL 474
D FN L + ++L
Sbjct: 387 DEFNALQVWEVSNSL 401
Score = 152 (58.6 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 60/235 (25%), Positives = 106/235 (45%)
Query: 187 SWADT--GHV-QVWD--FRSHLNALAESETVAGHGAPQVLNQSPLVKFGGHKDEGYAIDW 241
SW++T GH+ D H + A ++T++G Q++ QS KF GH + +
Sbjct: 178 SWSNTREGHLLTAGDDGMICHWDINA-NQTISG----QIVPQS---KFKGHSSNAEDVSF 229
Query: 242 NPVAPGRLVS-GDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFASCS 300
+ + S GD ++LW D + +GH A V + ++P + A+ S
Sbjct: 230 HALHNFVFGSVGDDRK-LNLW----DLRQSKPQLTAVGHTAEVNCITFNPFSEYILATGS 284
Query: 301 VDGNIAIWDTRVGKSALMSFKAHNADVNVISWN-RLASCLLASGSDDGTFSIHDLRLLK- 358
VD +A+WD R + + + K HN ++ +S++ + L +SGSDD + D+ ++
Sbjct: 285 VDKTVALWDMRNMRKKMYTLKHHNDEIFQVSFSPHYETVLASSGSDDRVI-VWDISKIQD 343
Query: 359 -------GGDSVVAHFEY----HKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLS 402
DSV + H V W+P+ T+ S N L +W++S
Sbjct: 344 PSSSSAASSDSVPPEVIFIHAGHTGKVADFSWNPNRPWTICSSDEFNALQVWEVS 398
>ASPGD|ASPL0000017699 [details] [associations]
symbol:AN8187 species:162425 "Emericella nidulans"
[GO:0000778 "condensed nuclear chromosome kinetochore"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0000070 "mitotic sister chromatid segregation"
evidence=IEA] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IEA] [GO:0034501 "protein localization to
kinetochore" evidence=IEA] [GO:0031055 "chromatin remodeling at
centromere" evidence=IEA] [GO:0070317 "negative regulation of G0 to
G1 transition" evidence=IEA] [GO:0016575 "histone deacetylation"
evidence=IEA] [GO:0031066 "regulation of histone deacetylation at
centromere" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001302 OMA:CQPDLRL InterPro:IPR022052
Pfam:PF12265 EnsemblFungi:CADANIAT00004230 Uniprot:C8V748
Length = 411
Score = 267 (99.0 bits), Expect = 6.7e-22, Sum P(2) = 6.7e-22
Identities = 75/241 (31%), Positives = 116/241 (48%)
Query: 224 SPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASV 283
+P ++ GHK EG+ + W+P G L +G + + + A V + H++ V
Sbjct: 163 NPQMELLGHKQEGFGLSWSPHVAGHLATG---RDLTTYTKNNKALQPV--RTYTHHSSIV 217
Query: 284 EDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKA---HNADVNVISWNRLASCLL 340
D+Q P S + + S D + I DTRV ++ + A H +N I++N A +L
Sbjct: 218 NDVQHHPLHSSLIGTVSDDITLQILDTRVAETTRAAATAEGQHRDAINAIAFNPAAETVL 277
Query: 341 ASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWD 400
A+GS D T + DLR LK + + E H VTSI W P E + LA +S D ++ WD
Sbjct: 278 ATGSADKTIGLWDLRNLK---TKLHTLENHTDSVTSISWHPFEEAVLASASYDRKIMFWD 334
Query: 401 LSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQKD-LKELHWHTQVPGMIVSTAA 459
LS T E +D PP+LLF+H G + + + W+ P ++ S A
Sbjct: 335 LS--------RAGEEQTPEDA---QDGPPELLFMHGGHTNRISDFSWNLNDPWVLCSAAE 383
Query: 460 D 460
D
Sbjct: 384 D 384
Score = 125 (49.1 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 41/157 (26%), Positives = 72/157 (45%)
Query: 252 GDCNSC-IHLWEPA---SDATWNVDPN-PFIGHAASVEDLQWSPTESDVFASCSVDGNIA 306
G+ N + +W+ + S T V+P +GH L WSP + A+ G
Sbjct: 139 GEVNKARVMIWDRSKHQSVPTGTVNPQMELLGHKQEGFGLSWSPHVAGHLAT----GRDL 194
Query: 307 IWDTRVGKSA--LMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVV 364
T+ K+ + ++ H++ VN + + L S L+ + SDD T I D R+ + +
Sbjct: 195 TTYTKNNKALQPVRTYTHHSSIVNDVQHHPLHSSLIGTVSDDITLQILDTRVAETTRAAA 254
Query: 365 AHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDL 401
H+ + +I ++P + LA SAD + +WDL
Sbjct: 255 TAEGQHRDAINAIAFNPAAETVLATGSADKTIGLWDL 291
Score = 116 (45.9 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 32/134 (23%), Positives = 57/134 (42%)
Query: 279 HAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASC 338
H ++ + ++P V A+ S D I +WD R K+ L + + H V ISW+
Sbjct: 260 HRDAINAIAFNPAAETVLATGSADKTIGLWDLRNLKTKLHTLENHTDSVTSISWHPFEEA 319
Query: 339 LLASGSDDGTFSIHDLRLL----------KGGDSVVAHFEYHKHPVTSIEWSPHEGSTLA 388
+LAS S D DL G ++ H + ++ W+ ++ L
Sbjct: 320 VLASASYDRKIMFWDLSRAGEEQTPEDAQDGPPELLFMHGGHTNRISDFSWNLNDPWVLC 379
Query: 389 VSSADNQLTIWDLS 402
++ DN L +W ++
Sbjct: 380 SAAEDNLLQVWKVA 393
Score = 41 (19.5 bits), Expect = 6.7e-22, Sum P(2) = 6.7e-22
Identities = 14/56 (25%), Positives = 26/56 (46%)
Query: 163 LRKVAHQGCVNRIRAM--SQNPHICASWADTG-HVQVWDFRSHLNALAESETVAGH 215
++K+ H+G VN+ R M ++ H +++ + L+ S VAGH
Sbjct: 132 VQKIDHKGEVNKARVMIWDRSKHQSVPTGTVNPQMELLGHKQEGFGLSWSPHVAGH 187
>DICTYBASE|DDB_G0279801 [details] [associations]
symbol:pex7 "peroxisomal biogenesis factor 7"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA;ISS] [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=IEA;ISS] [GO:0007031
"peroxisome organization" evidence=ISS] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0279801 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007031 GO:GO:0016558 EMBL:AAFI02000033
HSSP:P46680 KO:K13341 OMA:GHEYAVR GO:GO:0005053 RefSeq:XP_641489.1
ProteinModelPortal:Q54WA3 STRING:Q54WA3 EnsemblProtists:DDB0233068
GeneID:8622229 KEGG:ddi:DDB_G0279801 InParanoid:Q54WA3
ProtClustDB:CLSZ2729075 PANTHER:PTHR22850:SF4 Uniprot:Q54WA3
Length = 316
Score = 238 (88.8 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 56/176 (31%), Positives = 82/176 (46%)
Query: 225 PLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVE 284
P+ F H E Y++DWN V ++G + I +W P D + F H +
Sbjct: 96 PIKSFEEHTKEVYSVDWNLVTKDTFITGSWDQSIKIWNPRMDRSLKT----FREHRYCIY 151
Query: 285 DLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGS 344
WSP + +FAS S D + IWD+R +S L + KAH+ ++ WN+ + +GS
Sbjct: 152 SAIWSPRNAHLFASVSGDRTLKIWDSRDNRS-LNTIKAHDHEILTCDWNKYNDKEVVTGS 210
Query: 345 DDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWD 400
D T I D+R D H + V I+ SPH S LA S D + +WD
Sbjct: 211 VDKTIRIWDIRY---PDRPTTILRGHTYAVRRIKCSPHSESMLASCSYDMSVIVWD 263
Score = 160 (61.4 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 51/182 (28%), Positives = 80/182 (43%)
Query: 228 KFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDP-NPFIGHAASVE-- 284
+F H + GY+++++P RL C + H + + +D + IG + +
Sbjct: 3 RFHSHFN-GYSVEFSPFEEQRLA---CVTSQHFGIIGNGRQYILDVLDRDIGAFKTFDTR 58
Query: 285 ----DLQWSPTESDVFASCSVDGNIAIWDTRV--GKSALMSFKAHNADVNVISWNRLASC 338
D WS AS S DG+I IWDT+ G + SF+ H +V + WN +
Sbjct: 59 DGLYDCTWSEENECHVASSSGDGSIKIWDTQAPSGGRPIKSFEEHTKEVYSVDWNLVTKD 118
Query: 339 LLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTI 398
+GS D + I + R+ D + F H++ + S WSP A S D L I
Sbjct: 119 TFITGSWDQSIKIWNPRM----DRSLKTFREHRYCIYSAIWSPRNAHLFASVSGDRTLKI 174
Query: 399 WD 400
WD
Sbjct: 175 WD 176
Score = 127 (49.8 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 41/176 (23%), Positives = 69/176 (39%)
Query: 226 LVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVED 285
L F H+ Y+ W+P S + + +W D+ N N H +
Sbjct: 140 LKTFREHRYCIYSAIWSPRNAHLFASVSGDRTLKIW----DSRDNRSLNTIKAHDHEILT 195
Query: 286 LQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSD 345
W+ + SVD I IWD R + H V I + + +LAS S
Sbjct: 196 CDWNKYNDKEVVTGSVDKTIRIWDIRYPDRPTTILRGHTYAVRRIKCSPHSESMLASCSY 255
Query: 346 DGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDL 401
D + + D + D ++A ++H V ++W+ +A S D Q+ +W+L
Sbjct: 256 DMSVIVWDRA--REQDPIIARMDHHTEFVVGLDWNMFIDGQMASCSWDEQVCVWNL 309
>UNIPROTKB|H0YCT5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016581 EMBL:AC114489 HGNC:HGNC:9887
ChiTaRS:RBBP4 PRIDE:H0YCT5 Ensembl:ENST00000460669 Bgee:H0YCT5
Uniprot:H0YCT5
Length = 180
Score = 232 (86.7 bits), Expect = 7.0e-19, P = 7.0e-19
Identities = 60/168 (35%), Positives = 86/168 (51%)
Query: 302 DGNIAIWDTRVGKSALMSFK--AHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKG 359
D + IWDTR ++ S AH A+VN +S+N + +LA+GS D T ++ DLR LK
Sbjct: 4 DQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK- 62
Query: 360 GDSVVAH-FEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLSLXXXXXXXXXXXXXTR 418
+ H FE HK + ++WSPH + LA S D +L +WDLS
Sbjct: 63 ---LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS-----------KIGEE 108
Query: 419 EQVNAPEDLPPQLLFIHQGQK-DLKELHWHTQVPGMIVSTAADGFNIL 465
+ ED PP+LLFIH G + + W+ P +I S + D NI+
Sbjct: 109 QSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED--NIM 154
Score = 140 (54.3 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 37/154 (24%), Positives = 69/154 (44%)
Query: 260 LWEPASDATWNVDPNPFI-GHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALM 318
+W+ S+ T P+ + H A V L ++P + A+ S D +A+WD R K L
Sbjct: 9 IWDTRSNNTSK--PSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLH 66
Query: 319 SFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLL----------KGGDSVVAHFE 368
SF++H ++ + W+ +LAS D ++ DL + G ++
Sbjct: 67 SFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHG 126
Query: 369 YHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLS 402
H ++ W+P+E + S DN + +W ++
Sbjct: 127 GHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMA 160
>UNIPROTKB|B4DRT0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016581 EMBL:AC114489 UniGene:Hs.16003
HGNC:HGNC:9887 ChiTaRS:RBBP4 EMBL:AK299410 IPI:IPI00983362
SMR:B4DRT0 STRING:B4DRT0 Ensembl:ENST00000544435 UCSC:uc010ohj.2
HOVERGEN:HBG103193 Uniprot:B4DRT0
Length = 173
Score = 227 (85.0 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 59/163 (36%), Positives = 84/163 (51%)
Query: 307 IWDTRVGKSALMSFK--AHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVV 364
IWDTR ++ S AH A+VN +S+N + +LA+GS D T ++ DLR LK +
Sbjct: 2 IWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK----LK 57
Query: 365 AH-FEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLSLXXXXXXXXXXXXXTREQVNA 423
H FE HK + ++WSPH + LA S D +L +WDLS +
Sbjct: 58 LHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS-----------KIGEEQSPED 106
Query: 424 PEDLPPQLLFIHQGQK-DLKELHWHTQVPGMIVSTAADGFNIL 465
ED PP+LLFIH G + + W+ P +I S + D NI+
Sbjct: 107 AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED--NIM 147
Score = 140 (54.3 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 37/154 (24%), Positives = 69/154 (44%)
Query: 260 LWEPASDATWNVDPNPFI-GHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALM 318
+W+ S+ T P+ + H A V L ++P + A+ S D +A+WD R K L
Sbjct: 2 IWDTRSNNTSK--PSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLH 59
Query: 319 SFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLL----------KGGDSVVAHFE 368
SF++H ++ + W+ +LAS D ++ DL + G ++
Sbjct: 60 SFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHG 119
Query: 369 YHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLS 402
H ++ W+P+E + S DN + +W ++
Sbjct: 120 GHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMA 153
>TAIR|locus:2050372 [details] [associations]
symbol:FVE species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009826 "unidimensional
cell growth" evidence=IMP] [GO:0009908 "flower development"
evidence=IMP] [GO:0009965 "leaf morphogenesis" evidence=IMP]
[GO:0010090 "trichome morphogenesis" evidence=IMP] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006281 "DNA repair"
evidence=IMP] [GO:0010224 "response to UV-B" evidence=IEP]
[GO:0046872 "metal ion binding" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0030154
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005730 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0046872
GO:GO:0006281 eggNOG:COG2319 GO:GO:0006351 GO:GO:0016568
EMBL:AC005917 GO:GO:0009908 GO:GO:0010224 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
EMBL:AF498101 EMBL:AF498102 EMBL:AY849994 EMBL:AY059799
EMBL:AY057655 EMBL:AY081447 EMBL:AF028711 EMBL:Z37286 EMBL:Z37287
IPI:IPI00539247 PIR:G84577 RefSeq:NP_565456.2 UniGene:At.20032
ProteinModelPortal:O22607 SMR:O22607 DIP:DIP-59614N STRING:O22607
PaxDb:O22607 PRIDE:O22607 EnsemblPlants:AT2G19520.1 GeneID:816471
KEGG:ath:AT2G19520 GeneFarm:2818 TAIR:At2g19520 InParanoid:O22607
OMA:CIRELEQ PhylomeDB:O22607 ProtClustDB:CLSN2918036
Genevestigator:O22607 GermOnline:AT2G19520 Uniprot:O22607
Length = 507
Score = 248 (92.4 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 74/246 (30%), Positives = 111/246 (45%)
Query: 225 PLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDAT-WNVDPN--P---FIG 278
P V GG KD+ + W+ + D S + + + T N P P + G
Sbjct: 233 PFVLSGG-KDKSVVL-WSIQDHITTIGTDSKSSGSIIKQTGEGTDKNESPTVGPRGVYHG 290
Query: 279 HAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSF-KAHNADVNVISWNRLAS 337
H +VED+ +SPT + F S D + +WD R G + + KAH+AD++ + WN
Sbjct: 291 HEDTVEDVAFSPTSAQEFCSVGDDSCLILWDARTGTNPVTKVEKAHDADLHCVDWNPHDD 350
Query: 338 CLLASGSDDGTFSIHDLRLL--KGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQ 395
L+ +GS D T + D R L G S + FE HK V ++WSP + S S+ D
Sbjct: 351 NLILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGL 410
Query: 396 LTIWDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQKD-LKELHWHTQVPGMI 454
L IWD +++ A + P L F H G +D + + HW+ P I
Sbjct: 411 LNIWDYD------------RVSKKSDRAAKS-PAGLFFQHAGHRDKVVDFHWNASDPWTI 457
Query: 455 VSTAAD 460
VS + D
Sbjct: 458 VSVSDD 463
Score = 158 (60.7 bits), Expect = 9.9e-08, Sum P(2) = 9.9e-08
Identities = 62/257 (24%), Positives = 106/257 (41%)
Query: 168 HQGCVNRIRAMSQN-PHICASWADTGHVQVWDFRSHLNALAESETVAGHGAPQV-----L 221
HQ AM P + + D V +W + H+ + +G Q
Sbjct: 218 HQDNAEFALAMCPTEPFVLSGGKDKS-VVLWSIQDHITTIGTDSKSSGSIIKQTGEGTDK 276
Query: 222 NQSPLVK----FGGHKDEGYAIDWNPVAPGRLVS-GDCNSCIHLWEPASDATWNVDPNPF 276
N+SP V + GH+D + ++P + S GD +SC+ LW DA +P
Sbjct: 277 NESPTVGPRGVYHGHEDTVEDVAFSPTSAQEFCSVGD-DSCLILW----DARTGTNPVTK 331
Query: 277 I--GHAASVEDLQWSPTESDVFASCSVDGNIAIWDTR------VGKSALMSFKAHNADVN 328
+ H A + + W+P + ++ + S D + ++D R VG S + F+ H A V
Sbjct: 332 VEKAHDADLHCVDWNPHDDNLILTGSADNTVRLFDRRKLTANGVG-SPIYKFEGHKAAVL 390
Query: 329 VISWNRLASCLLASGSDDGTFSIHDL-RLLKGGDSVVAH-----FEY--HKHPVTSIEWS 380
+ W+ S + S ++DG +I D R+ K D F++ H+ V W+
Sbjct: 391 CVQWSPDKSSVFGSSAEDGLLNIWDYDRVSKKSDRAAKSPAGLFFQHAGHRDKVVDFHWN 450
Query: 381 PHEGSTLAVSSADNQLT 397
+ T+ S D + T
Sbjct: 451 ASDPWTIVSVSDDCETT 467
Score = 37 (18.1 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 18/66 (27%), Positives = 28/66 (42%)
Query: 13 RRPKERTRTQKKGNGXXXXX-IPSLPTKVWQ-PGVD-KLEEGEELQCDPTAYNSLHAFHI 69
R+PK + +Q + + K Q P VD K + + L P Y+ L ++
Sbjct: 30 RKPKTKEDSQTPSSQQQSDVKMKESGKKTQQSPSVDEKYSQWKGLV--PILYDWLANHNL 87
Query: 70 GWPCLS 75
WP LS
Sbjct: 88 VWPSLS 93
>CGD|CAL0005992 [details] [associations]
symbol:orf19.3581 species:5476 "Candida albicans" [GO:0042393
"histone binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0006335
"DNA replication-dependent nucleosome assembly" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005992 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 EMBL:AACQ01000094
EMBL:AACQ01000093 InterPro:IPR022052 Pfam:PF12265
HOGENOM:HOG000160330 RefSeq:XP_714940.1 RefSeq:XP_715003.1
ProteinModelPortal:Q59ZD9 STRING:Q59ZD9 GeneID:3643390
GeneID:3643420 KEGG:cal:CaO19.11065 KEGG:cal:CaO19.3581
Uniprot:Q59ZD9
Length = 435
Score = 239 (89.2 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 64/244 (26%), Positives = 127/244 (52%)
Query: 163 LRKVAHQGCVNRIRAMSQNPHICASWADTGHVQVWD---FRSHLNALAESETVAGHGAPQ 219
L+K+ H G VN++R M Q P+I AS + G++ +++ +S N + + +T +
Sbjct: 151 LQKINHLGDVNKVRYMPQKPNILASANNLGNLVIYERTRHKSFKNTILD-DTDLSKVQVR 209
Query: 220 VLNQSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFI-G 278
++N K + +AIDWN + G L+S D N ++L++ + ++ + +
Sbjct: 210 LVN-----KHIPSTTDIFAIDWNRNSEGLLLSADMNGLVNLYDLKKYESETLNESQYWEN 264
Query: 279 HAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASC 338
+A V D++W PT +F + +G + ++DTR +A+ + N+ VN ++ N +
Sbjct: 265 NAIGVNDIEWFPTHDSLFCTADDNGWLKLYDTRNQSAAVQNANIGNS-VNSVACNPGYAT 323
Query: 339 LLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTI 398
LA+G +G + D+R D+ ++ H VT ++W+P + L SS+D+ + +
Sbjct: 324 GLATGDSNGVIKMWDIRNF---DNSLSELHGHSDSVTQLKWNPKCHNILGSSSSDHSVKL 380
Query: 399 WDLS 402
D+S
Sbjct: 381 HDMS 384
Score = 137 (53.3 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 40/161 (24%), Positives = 69/161 (42%)
Query: 239 IDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFAS 298
I+W P + D N + L++ + + + N IG+ SV + +P + A+
Sbjct: 272 IEWFPTHDSLFCTADDNGWLKLYDTRNQSAAVQNAN--IGN--SVNSVACNPGYATGLAT 327
Query: 299 CSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 358
+G I +WD R ++L H+ V + WN +L S S D + +HD+
Sbjct: 328 GDSNGVIKMWDIRNFDNSLSELHGHSDSVTQLKWNPKCHNILGSSSSDHSVKLHDM---- 383
Query: 359 GGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
DS + H V +WS + +A + DN L +W
Sbjct: 384 SNDSTIFTHLGHMLGVNDFDWSYADPWMVASVADDNSLHVW 424
>SGD|S000000782 [details] [associations]
symbol:HAT2 "Subunit of the Hat1p-Hat2p histone
acetyltransferase complex" species:4932 "Saccharomyces cerevisiae"
[GO:0042393 "histone binding" evidence=IDA] [GO:0000123 "histone
acetyltransferase complex" evidence=IDA;IPI] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0006333 "chromatin assembly or disassembly"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0004402
"histone acetyltransferase activity" evidence=IDA;IMP;IPI]
[GO:0016573 "histone acetylation" evidence=IDA;IMP] [GO:0006348
"chromatin silencing at telomere" evidence=IGI] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000782 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006281
eggNOG:COG2319 GO:GO:0016573 EMBL:BK006939 GO:GO:0006333
GO:GO:0006348 EMBL:U18795 GO:GO:0042393
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0000123 HOGENOM:HOG000160330 OrthoDB:EOG412QFD
PIR:S50533 RefSeq:NP_010858.3 RefSeq:NP_010861.3
ProteinModelPortal:P39984 SMR:P39984 DIP:DIP-2363N IntAct:P39984
MINT:MINT-654148 STRING:P39984 PaxDb:P39984 PeptideAtlas:P39984
EnsemblFungi:YEL056W GeneID:856654 GeneID:856657 KEGG:sce:YEL053C
KEGG:sce:YEL056W CYGD:YEL056w OMA:VLYDLVI NextBio:982637
Genevestigator:P39984 GermOnline:YEL056W Uniprot:P39984
Length = 401
Score = 235 (87.8 bits), Expect = 2.7e-17, P = 2.7e-17
Identities = 73/257 (28%), Positives = 121/257 (47%)
Query: 223 QSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPAS--DATWNVDP-NPFIGH 279
QS L KF HKD GYA+ ++ + GRL+SG + + LWE S D T V N H
Sbjct: 153 QSTL-KF--HKDNGYALSFSTLVKGRLLSGSDDHTVALWEVGSGGDPTKPVRTWNDL--H 207
Query: 280 AASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCL 339
+ + D +W D+F + S D + I D R + + + K N ++++ +S L
Sbjct: 208 SDIINDNKWHNFNKDLFGTVSEDSLLKINDVRANNTTIDTVKCPQP-FNTLAFSHHSSNL 266
Query: 340 LASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
LA+ D ++DLR +K + H H+ V ++E+S H + S +DN+L +W
Sbjct: 267 LAAAGMDSYVYLYDLRNMK---EPLHHMSGHEDAVNNLEFSTHVDGVVVSSGSDNRLMMW 323
Query: 400 DLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQKD-LKELHWHTQVPGMIVSTA 458
DL + + ED P+L+ +H G + + + + Q+P ++ S
Sbjct: 324 DLK-----------QIGAEQTPDDAEDGVPELIMVHAGHRSSVNDFDLNPQIPWLVAS-- 370
Query: 459 ADGFNILMPSNIQSTLP 475
A+ NIL +LP
Sbjct: 371 AEEENILQVWKCSHSLP 387
>TAIR|locus:2134408 [details] [associations]
symbol:NFC5 "AT4G29730" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006351 GO:GO:0016568
EMBL:AL161575 EMBL:AL079344 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
ProtClustDB:CLSN2918036 EMBL:BT010610 EMBL:AK176425 IPI:IPI00548369
PIR:T09936 RefSeq:NP_194702.2 UniGene:At.31893
ProteinModelPortal:Q9SU78 SMR:Q9SU78 STRING:Q9SU78 PaxDb:Q9SU78
PRIDE:Q9SU78 EnsemblPlants:AT4G29730.1 GeneID:829094
KEGG:ath:AT4G29730 GeneFarm:2946 TAIR:At4g29730 InParanoid:Q9SU78
OMA:VGKKSER PhylomeDB:Q9SU78 Genevestigator:Q9SU78
GermOnline:AT4G29730 Uniprot:Q9SU78
Length = 487
Score = 237 (88.5 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 74/244 (30%), Positives = 107/244 (43%)
Query: 225 PLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPA---SDATWNVDPNP---FIG 278
P V GG KD+ + WN + D S ++ SD T P + G
Sbjct: 213 PFVLSGG-KDKSVIL-WNIQDHITMAGSDSKSPGSSFKQTGEGSDKTGGPSVGPRGIYNG 270
Query: 279 HAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSF-KAHNADVNVISWNRLAS 337
H +VED+ + P+ + F S D + +WD R G S M KAH+AD++ + WN +
Sbjct: 271 HKDTVEDVAFCPSSAQEFCSVGDDSCLMLWDARTGTSPAMKVEKAHDADLHCVDWNPHDN 330
Query: 338 CLLASGSDDGTFSIHDLRLL--KGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQ 395
L+ +GS D T + D R L G S V FE H+ V ++WSP + S S+ D
Sbjct: 331 NLILTGSADNTVRVFDRRNLTSNGVGSPVYKFEGHRAAVLCVQWSPDKSSVFGSSAEDGL 390
Query: 396 LTIWDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQKD-LKELHWHTQVPGMI 454
L IWD ++ A + P L F H G +D + + HW P I
Sbjct: 391 LNIWDCDRVG------------KKSERATKT-PDGLFFQHAGHRDKVVDFHWSLLNPWTI 437
Query: 455 VSTA 458
VS +
Sbjct: 438 VSVS 441
Score = 139 (54.0 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 34/98 (34%), Positives = 55/98 (56%)
Query: 224 SPLVKFG-GHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNP---FIGH 279
SP +K H + + +DWNP +++G ++ + +++ + T N +P F GH
Sbjct: 307 SPAMKVEKAHDADLHCVDWNPHDNNLILTGSADNTVRVFD-RRNLTSNGVGSPVYKFEGH 365
Query: 280 AASVEDLQWSPTESDVFASCSVDGNIAIWDT-RVGKSA 316
A+V +QWSP +S VF S + DG + IWD RVGK +
Sbjct: 366 RAAVLCVQWSPDKSSVFGSSAEDGLLNIWDCDRVGKKS 403
>TAIR|locus:2029939 [details] [associations]
symbol:PEX7 "AT1G29260" species:3702 "Arabidopsis
thaliana" [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006625 "protein
targeting to peroxisome" evidence=IMP] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0016558 "protein import into
peroxisome matrix" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005778 EMBL:AC021043
HSSP:P16649 GO:GO:0080008 GO:GO:0006625 TCDB:3.A.20.1.2
EMBL:AF130973 EMBL:BT024863 IPI:IPI00548845 PIR:B86415
RefSeq:NP_174220.1 UniGene:At.11271 ProteinModelPortal:Q9XF57
SMR:Q9XF57 STRING:Q9XF57 PaxDb:Q9XF57 PRIDE:Q9XF57
EnsemblPlants:AT1G29260.1 GeneID:839800 KEGG:ath:AT1G29260
GeneFarm:3660 TAIR:At1g29260 HOGENOM:HOG000204332 InParanoid:Q9LP54
KO:K13341 OMA:GHEYAVR PhylomeDB:Q9XF57 ProtClustDB:CLSN2679693
Genevestigator:Q9XF57 Uniprot:Q9XF57
Length = 317
Score = 223 (83.6 bits), Expect = 9.6e-17, P = 9.6e-17
Identities = 54/177 (30%), Positives = 85/177 (48%)
Query: 224 SPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASV 283
+P+ F H E ++D+NP ++ + + LW A D +V F HA V
Sbjct: 97 NPIRSFQEHAREVQSVDYNPTRRDSFLTSSWDDTVKLW--AMDRPASV--RTFKEHAYCV 152
Query: 284 EDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASG 343
W+P DVFAS S D + IWD R S ++ AH+ ++ WN+ C+LA+
Sbjct: 153 YQAVWNPKHGDVFASASGDCTLRIWDVREPGSTMI-IPAHDFEILSCDWNKYDDCILATS 211
Query: 344 SDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWD 400
S D T + D+R + +A H + V +++SPH S +A S D + +WD
Sbjct: 212 SVDKTVKVWDVRSYR---VPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDMSVCLWD 265
Score = 159 (61.0 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 50/204 (24%), Positives = 92/204 (45%)
Query: 205 ALAESETVAGHGAPQVLNQSP----LVKFGGHK--DEGYAIDWNPVAPGRLVSGDCNSCI 258
A A++ + G+G VL +P + + + D Y + W+ L++ + +
Sbjct: 26 ATAQNFGILGNGRIHVLELAPGAPGVTESVSYDTADAVYDVCWSESHDSVLIAAIGDGSV 85
Query: 259 HLWEPASDATWNVDP-NPFIGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSAL 317
+++ A N P F HA V+ + ++PT D F + S D + +W +++
Sbjct: 86 KIYDTALPPPSN--PIRSFQEHAREVQSVDYNPTRRDSFLTSSWDDTVKLW-AMDRPASV 142
Query: 318 MSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSI 377
+FK H V WN + AS S D T I D+R + G +++ H + S
Sbjct: 143 RTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVR--EPGSTMI--IPAHDFEILSC 198
Query: 378 EWSPHEGSTLAVSSADNQLTIWDL 401
+W+ ++ LA SS D + +WD+
Sbjct: 199 DWNKYDDCILATSSVDKTVKVWDV 222
Score = 134 (52.2 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 45/175 (25%), Positives = 74/175 (42%)
Query: 236 GYAIDWNPVAPGRLVSGDC-------NSCIHLWEPASDATWNVDPNPFIGHAASVEDLQW 288
GY++ ++P RL N IH+ E A A V + A +V D+ W
Sbjct: 10 GYSVKFSPFYESRLAVATAQNFGILGNGRIHVLELAPGAP-GVTESVSYDTADAVYDVCW 68
Query: 289 SPTESDVFASCSVDGNIAIWDTRVG--KSALMSFKAHNADVNVISWNRLASCLLASGSDD 346
S + V + DG++ I+DT + + + SF+ H +V + +N + S D
Sbjct: 69 SESHDSVLIAAIGDGSVKIYDTALPPPSNPIRSFQEHAREVQSVDYNPTRRDSFLTSSWD 128
Query: 347 GTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDL 401
T + + + V F+ H + V W+P G A +S D L IWD+
Sbjct: 129 DTVKLWAM----DRPASVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDV 179
Score = 121 (47.7 bits), Expect = 0.00014, P = 0.00014
Identities = 37/166 (22%), Positives = 68/166 (40%)
Query: 237 YAIDWNPVAPGRL---VSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTES 293
Y WNP G + SGDC + +W+ + + P H + W+ +
Sbjct: 153 YQAVWNP-KHGDVFASASGDCT--LRIWDVREPGSTMIIP----AHDFEILSCDWNKYDD 205
Query: 294 DVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHD 353
+ A+ SVD + +WD R + L H V + ++ L+AS S D + + D
Sbjct: 206 CILATSSVDKTVKVWDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDMSVCLWD 265
Query: 354 LRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
+ D++V +++H I+ S +A + D + +W
Sbjct: 266 YMV---EDALVGRYDHHTEFAVGIDMSVLVEGLMASTGWDELVYVW 308
>CGD|CAL0005349 [details] [associations]
symbol:HAT2 species:5476 "Candida albicans" [GO:0000123
"histone acetyltransferase complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA;IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA;IDA] [GO:0016573 "histone acetylation"
evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:2000221
"negative regulation of pseudohyphal growth" evidence=IMP]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
[GO:0034614 "cellular response to reactive oxygen species"
evidence=IMP] [GO:0006333 "chromatin assembly or disassembly"
evidence=IEA] [GO:0006348 "chromatin silencing at telomere"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005349 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006281 eggNOG:COG2319 GO:GO:0016568
KO:K10752 InterPro:IPR022052 Pfam:PF12265 EMBL:AACQ01000162
EMBL:AACQ01000158 RefSeq:XP_712278.1 RefSeq:XP_712421.1
ProteinModelPortal:Q59RH5 STRING:Q59RH5 GeneID:3645973
GeneID:3646093 KEGG:cal:CaO19.2146 KEGG:cal:CaO19.9693
Uniprot:Q59RH5
Length = 382
Score = 221 (82.9 bits), Expect = 9.4e-16, P = 9.4e-16
Identities = 70/256 (27%), Positives = 117/256 (45%)
Query: 211 TVAGHGAPQVLN---QSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASD- 266
T+ G G + N ++ F H GY + WNP G LV+G ++ + + + ++
Sbjct: 118 TINGLGEVDLYNLDTETRYSHFAPHTKNGYGLSWNPKQKGLLVTGADDNFVCVTDTTTNK 177
Query: 267 ATWNVDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNAD 326
T+ D I V D++W ++FAS S D ++ ++D R K + +
Sbjct: 178 TTFKSDIQKDI-----VNDVKWHQFNGNLFASVSEDSHVYLFDARDNKVVSQYYAESSNG 232
Query: 327 VNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEY-HKHPVTSIEWSPHEGS 385
+N ++++ A L+A G+ ++ DLR L G +S + H H +T +E+SPH
Sbjct: 233 INSLAFSPFAENLVAIGNTSSNINLLDLRKL-GENSGLLHTMMGHSEGITCMEFSPHHDG 291
Query: 386 TLAVSSADNQLTIWDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQK-DLKEL 444
LA S D ++ IWDL ++Q +A ED P+L +H G + +L
Sbjct: 292 ILATGSQDRRIIIWDL----------FKVGEEQQQEDA-EDGCPELFMMHAGHTAGVSDL 340
Query: 445 HWHTQVPGMIVSTAAD 460
W MI S A D
Sbjct: 341 SWCPFKDWMIGSVADD 356
>UNIPROTKB|Q59RH5 [details] [associations]
symbol:HAT2 "Histone acetyltransferase type B subunit 2"
species:237561 "Candida albicans SC5314" [GO:0005634 "nucleus"
evidence=IDA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0034614 "cellular response to reactive oxygen species"
evidence=IMP] [GO:2000221 "negative regulation of pseudohyphal
growth" evidence=IMP] [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0042393 "histone binding" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005349 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006281
eggNOG:COG2319 GO:GO:0016568 KO:K10752 InterPro:IPR022052
Pfam:PF12265 EMBL:AACQ01000162 EMBL:AACQ01000158 RefSeq:XP_712278.1
RefSeq:XP_712421.1 ProteinModelPortal:Q59RH5 STRING:Q59RH5
GeneID:3645973 GeneID:3646093 KEGG:cal:CaO19.2146
KEGG:cal:CaO19.9693 Uniprot:Q59RH5
Length = 382
Score = 221 (82.9 bits), Expect = 9.4e-16, P = 9.4e-16
Identities = 70/256 (27%), Positives = 117/256 (45%)
Query: 211 TVAGHGAPQVLN---QSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASD- 266
T+ G G + N ++ F H GY + WNP G LV+G ++ + + + ++
Sbjct: 118 TINGLGEVDLYNLDTETRYSHFAPHTKNGYGLSWNPKQKGLLVTGADDNFVCVTDTTTNK 177
Query: 267 ATWNVDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNAD 326
T+ D I V D++W ++FAS S D ++ ++D R K + +
Sbjct: 178 TTFKSDIQKDI-----VNDVKWHQFNGNLFASVSEDSHVYLFDARDNKVVSQYYAESSNG 232
Query: 327 VNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEY-HKHPVTSIEWSPHEGS 385
+N ++++ A L+A G+ ++ DLR L G +S + H H +T +E+SPH
Sbjct: 233 INSLAFSPFAENLVAIGNTSSNINLLDLRKL-GENSGLLHTMMGHSEGITCMEFSPHHDG 291
Query: 386 TLAVSSADNQLTIWDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQK-DLKEL 444
LA S D ++ IWDL ++Q +A ED P+L +H G + +L
Sbjct: 292 ILATGSQDRRIIIWDL----------FKVGEEQQQEDA-EDGCPELFMMHAGHTAGVSDL 340
Query: 445 HWHTQVPGMIVSTAAD 460
W MI S A D
Sbjct: 341 SWCPFKDWMIGSVADD 356
>SGD|S000000399 [details] [associations]
symbol:MSI1 "Subunit of chromatin assembly factor I (CAF-1)"
species:4932 "Saccharomyces cerevisiae" [GO:0033186 "CAF-1 complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0006335 "DNA
replication-dependent nucleosome assembly" evidence=IDA]
[GO:0042393 "histone binding" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000000399 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:BK006936 EMBL:Z21487
GO:GO:0006335 GO:GO:0033186 InterPro:IPR022052 Pfam:PF12265
HOGENOM:HOG000160330 EMBL:M27300 EMBL:Z36064 EMBL:AY692834
PIR:S07865 RefSeq:NP_009754.1 ProteinModelPortal:P13712 SMR:P13712
DIP:DIP-338N IntAct:P13712 MINT:MINT-386252 STRING:P13712
PaxDb:P13712 PeptideAtlas:P13712 EnsemblFungi:YBR195C GeneID:852494
KEGG:sce:YBR195C CYGD:YBR195c OMA:MPDVTKT OrthoDB:EOG44TSHP
NextBio:971486 Genevestigator:P13712 GermOnline:YBR195C
Uniprot:P13712
Length = 422
Score = 213 (80.0 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 68/249 (27%), Positives = 116/249 (46%)
Query: 170 GCVNRIRAMSQNPHICASWADTGHVQVWDFRSH---------LNALAESETVAGHGAPQV 220
G NR R + QNP I A + G + ++D H ++ E++ HG Q
Sbjct: 130 GECNRARYLPQNPDIIAGASSDGAIYIFDRTKHGSTRIRQSKISHPFETKLFGSHGVIQ- 188
Query: 221 LNQSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWN--VD-PNPFI 277
+ + +E ++ WN L+S N + +W+ + N +D P I
Sbjct: 189 -DVEAMDTSSADINEATSLAWNLQQEALLLSSHSNGQVQVWDIKQYSHENPIIDLPLVSI 247
Query: 278 G-HAASVEDLQWSPTESDVFASCSVDGN-IAIWDTRVGKSALMSFKA-HNADVNVISWNR 334
+V D+ W PT +FA+C+ +GN +++ D R K L S + H+ VN +N
Sbjct: 248 NSDGTAVNDVTWMPTHDSLFAACT-EGNAVSLLDLRTKKEKLQSNREKHDGGVNSCRFNY 306
Query: 335 LASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADN 394
S +LAS +G ++ D+R + S +A E H V+++EWSP+ + LA + ++
Sbjct: 307 KNSLILASADSNGRLNLWDIRNMN--KSPIATME-HGTSVSTLEWSPNFDTVLATAGQED 363
Query: 395 QLT-IWDLS 402
L +WD S
Sbjct: 364 GLVKLWDTS 372
Score = 129 (50.5 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 36/119 (30%), Positives = 56/119 (47%)
Query: 249 LVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFASCSV-DGNIAI 307
L S D N ++LW+ + N P + H SV L+WSP V A+ DG + +
Sbjct: 312 LASADSNGRLNLWDIRN---MNKSPIATMEHGTSVSTLEWSPNFDTVLATAGQEDGLVKL 368
Query: 308 WDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAH 366
WDT + + + H VN ISW+ L+ S ++D S+H + K ++V H
Sbjct: 369 WDTSC-EETIFTHGGHMLGVNDISWDAHDPWLMCSVANDN--SVH---IWKPAGNLVGH 421
>UNIPROTKB|G4MRA1 [details] [associations]
symbol:MGG_04693 "WD repeat-containing protein 57"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
KO:K12857 RefSeq:XP_003710838.1 ProteinModelPortal:G4MRA1
EnsemblFungi:MGG_04693T0 GeneID:2678191 KEGG:mgr:MGG_04693
Uniprot:G4MRA1
Length = 352
Score = 210 (79.0 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 57/186 (30%), Positives = 90/186 (48%)
Query: 217 APQVLN-QSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNP 275
AP++ + Q+PL++ GH E + +N A + SG + I LW D N
Sbjct: 43 APRLSSLQAPLMELSGHSGEIFCAKFNS-AGQYIASGSMDRSILLWRANGDCE-NY--GI 98
Query: 276 FIGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRL 335
GH ++ DLQWS +SD+ S S D ++A WD G+ + + H +N + ++
Sbjct: 99 LSGHRGAILDLQWS-RDSDIIFSASADMHLASWDLTTGER-IRRYVGHEEVINSLDISKR 156
Query: 336 ASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQ 395
+L SGSDDGT I D R D + + F PVT++ S G+ + DN
Sbjct: 157 GEEILFSGSDDGTIGIWDPRKKHAADYIESDF-----PVTAVAIS-EAGNEIYSGGIDND 210
Query: 396 LTIWDL 401
+ +WD+
Sbjct: 211 IKVWDV 216
>DICTYBASE|DDB_G0271788 [details] [associations]
symbol:wdr57 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0005681 "spliceosomal complex" evidence=IEA;ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0271788
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000006
GO:GO:0000398 KO:K12857 OMA:HAGSVNE HSSP:P61964 RefSeq:XP_645454.1
ProteinModelPortal:Q55AR8 STRING:Q55AR8 EnsemblProtists:DDB0233518
GeneID:8618082 KEGG:ddi:DDB_G0271788 Uniprot:Q55AR8
Length = 355
Score = 207 (77.9 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 53/179 (29%), Positives = 88/179 (49%)
Query: 223 QSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAAS 282
+ P+++ GHK E Y+ +N L SG + I LW + ++ + GH +
Sbjct: 52 EHPIMQLIGHKGEIYSCKFNSYGTA-LASGGSDKEIFLWNVYGEC---INYSVLKGHKGT 107
Query: 283 VEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLAS 342
+ +L WS ++++ +C+ D +I +WD+ G+ + + H+ VN R L+AS
Sbjct: 108 ILELHWSTDSNEIYTACT-DKSIGVWDSNKGE-LIKRIREHSGVVNSCCPARRGPPLVAS 165
Query: 343 GSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDL 401
GSDD + I D R KG H HK+PVTS+ +S L DN + +WD+
Sbjct: 166 GSDDRSARIFDTRS-KGS----THLFQHKYPVTSVCFSD-ASDQLITGGIDNVIRVWDI 218
>UNIPROTKB|Q17GR9 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7159 "Aedes aegypti" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 EMBL:CH477256
RefSeq:XP_001662680.1 UniGene:Aae.8569 ProteinModelPortal:Q17GR9
STRING:Q17GR9 EnsemblMetazoa:AAEL002912-RA GeneID:5576487
KEGG:aag:AaeL_AAEL002912 VectorBase:AAEL002912 HOGENOM:HOG000208901
OMA:SWKCVCT OrthoDB:EOG45DV4X PhylomeDB:Q17GR9 Uniprot:Q17GR9
Length = 337
Score = 188 (71.2 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 46/170 (27%), Positives = 77/170 (45%)
Query: 231 GHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSP 290
GH+ + W+P G+ + I +W + W GH+ ++ D+ WSP
Sbjct: 12 GHRGRAWGAGWHPKGNVLATCGE-DKTIRIWAEDASQRWVAKTVLSDGHSRTIRDVAWSP 70
Query: 291 TESDVFASCSVDGNIAIWDTRVGK-SALMSFKAHNADVNVISWNRLASCLLASGSDDGTF 349
AS S D +AIWD + G+ + + H +V +SW++ S LLA+ S D +
Sbjct: 71 C-GQYLASASFDATVAIWDKKSGEFECNATLEGHENEVKSVSWSKSGS-LLATCSRDKSV 128
Query: 350 SIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
+ ++ + A H V +EW PHE LA +S DN + ++
Sbjct: 129 WVWEVAQ-EDEYECAAVLNTHTQDVKKVEWHPHE-DILASASYDNTIKLY 176
Score = 134 (52.2 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 40/130 (30%), Positives = 59/130 (45%)
Query: 278 GHAASVEDLQWSPTESDVFASCSVDGNIAIW--DTR---VGKSALMSFKAHNADVNVISW 332
GH W P + +V A+C D I IW D V K+ L H+ + ++W
Sbjct: 12 GHRGRAWGAGWHP-KGNVLATCGEDKTIRIWAEDASQRWVAKTVLSD--GHSRTIRDVAW 68
Query: 333 NRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSA 392
+ LAS S D T +I D + G A E H++ V S+ WS GS LA S
Sbjct: 69 SPCGQ-YLASASFDATVAIWDKK--SGEFECNATLEGHENEVKSVSWSK-SGSLLATCSR 124
Query: 393 DNQLTIWDLS 402
D + +W+++
Sbjct: 125 DKSVWVWEVA 134
Score = 106 (42.4 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 51/191 (26%), Positives = 80/191 (41%)
Query: 231 GHKDEGYAIDWNPVAPGRLVSGDCN--SCIHLWEPASDATWNVDPNPFIGHAASVEDLQW 288
GH++E ++ W+ G L++ C+ + +WE A + + H V+ ++W
Sbjct: 102 GHENEVKSVSWSK--SGSLLA-TCSRDKSVWVWEVAQEDEYECAA-VLNTHTQDVKKVEW 157
Query: 289 SPTESDVFASCSVDGNIAIWDTRVGKSALMSFK---AHNADVNVISW----NRLASCLLA 341
P E D+ AS S D I ++ + S SF +H + V IS+ NRLASC
Sbjct: 158 HPHE-DILASASYDNTIKLYKEDLADSDWSSFDTLVSHESTVWSISFDGSGNRLASC--- 213
Query: 342 SGSDDGTFSIHDLRLLKGGDSVVAHFE-------------YHKHPVTSIEWSPHEGSTLA 388
SDD T I G + V+ + YH V I W G LA
Sbjct: 214 --SDDQTVKIWQ-EYKPGNEFGVSCPDNTPVWKCVCTLAGYHSRSVYDISWCKQSG-LLA 269
Query: 389 VSSADNQLTIW 399
+ D+ + I+
Sbjct: 270 TACGDDMVRIF 280
Score = 56 (24.8 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 435 HQGQKDLKELHWHTQVPGMIVSTAADG 461
H +D+ + W+ V G++V+T+ DG
Sbjct: 300 HAHSQDVNTVEWNPTVVGLLVTTSDDG 326
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 206 (77.6 bits), Expect = 8.0e-14, P = 8.0e-14
Identities = 56/155 (36%), Positives = 78/155 (50%)
Query: 246 PGRLVSGDCNSCIHLWEPASDATWNVDPNP-FIGHAASVEDLQWSPTESDVFASCSVDGN 304
P RLVSG + + +W PA D P GH A + + +SP +S + AS S D +
Sbjct: 292 PERLVSGSDDFTLFMWSPAEDKK----PLARMTGHQALINQVLFSP-DSRIIASASFDKS 346
Query: 305 IAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVV 364
I +WD R GK L S + H A V I+W+ S LL SGS D T + D++ K +
Sbjct: 347 IKLWDGRTGKY-LASLRGHVAAVYQIAWSA-DSRLLVSGSSDSTLKVWDVKAQK----LA 400
Query: 365 AHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
A H V +++WSP +G +A D L IW
Sbjct: 401 ADLPGHADEVYAVDWSP-DGQRVASGGKDKCLRIW 434
Score = 137 (53.3 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 48/186 (25%), Positives = 78/186 (41%)
Query: 223 QSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDC-NSCIHLWEPASDATWNVDPNPFIGHAA 281
++P GH+ +I W+P G+ ++ C N I LW+P+ T GH+
Sbjct: 97 ETPHFTCQGHRHWVLSISWSP--DGKTLASGCKNGQILLWDPS---TGKQVGRVLAGHSK 151
Query: 282 SVEDLQWSPTESD----VFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLAS 337
+ L W P ++ AS S DG++ +WDT G+ + H V + W
Sbjct: 152 WITGLSWEPLHANPECRYMASSSKDGSVRVWDTTAGRCERI-LTGHTQSVTCLRWG--GD 208
Query: 338 CLLASGSDDGTFSIHDLRLLKGGDSVVAH-FEYHKHPVTSIEWSPHEG-STLAVSSADNQ 395
LL S S D T +++ + D V+ + H H V ++ S T A A+
Sbjct: 209 GLLYSASQDRT-----IKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEAS 263
Query: 396 LTIWDL 401
+ DL
Sbjct: 264 INAQDL 269
>UNIPROTKB|E1BYP4 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001764 "neuron migration" evidence=IEA] [GO:0001958
"endochondral ossification" evidence=IEA] [GO:0005053 "peroxisome
matrix targeting signal-2 binding" evidence=IEA] [GO:0005782
"peroxisomal matrix" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006635 "fatty acid beta-oxidation" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 GO:GO:0016558 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AADN02025502
EMBL:AADN02025503 IPI:IPI00583820 RefSeq:XP_419724.3
UniGene:Gga.10547 ProteinModelPortal:E1BYP4
Ensembl:ENSGALT00000022499 GeneID:421687 KEGG:gga:421687
Uniprot:E1BYP4
Length = 321
Score = 196 (74.1 bits), Expect = 8.3e-14, Sum P(2) = 8.3e-14
Identities = 56/197 (28%), Positives = 89/197 (45%)
Query: 211 TVAGHGAPQVLN----QSPLVKFGGHKDEGYAIDWNPVAPGRLV-SGDCNSCIHLWEPAS 265
T +G G+ Q+ + + PL + H E Y++DW+ +LV SG + LW+PA
Sbjct: 83 TSSGDGSLQIWDIAKPKGPLQVYKEHTQEAYSVDWSQTRGEQLVVSGSWDQTAKLWDPAV 142
Query: 266 DATWNVDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNA 325
+ F GH + WSP FAS S D + IWD + L+ AH A
Sbjct: 143 GKSLRT----FKGHEGVIYSTIWSPHIPGCFASASGDQTLRIWDVKAPGVRLV-IPAHQA 197
Query: 326 DVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGS 385
++ W + LL +G+ D + DLR ++ ++ H + V +++SP +
Sbjct: 198 EILSCDWCKYDENLLVTGAVDCSLKGWDLRNVRQPVFILLG---HTYAVRRVKFSPFHAT 254
Query: 386 TLAVSSADNQLTIWDLS 402
LA S D + WD S
Sbjct: 255 LLASCSYDFTVRFWDFS 271
Score = 159 (61.0 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 50/172 (29%), Positives = 75/172 (43%)
Query: 236 GYAIDWNPVAPGRLVSGDCN-----SCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSP 290
GYA +++P PGR+ C L + T V F + + D+ WS
Sbjct: 17 GYAAEFSPYWPGRVACAAAQYYGIAGCGTLAVLEQNETGIVLLRSFDWNDG-LFDVTWSE 75
Query: 291 TESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRL-ASCLLASGSDDGTF 349
V + S DG++ IWD K L +K H + + W++ L+ SGS D T
Sbjct: 76 NNEHVLITSSGDGSLQIWDIAKPKGPLQVYKEHTQEAYSVDWSQTRGEQLVVSGSWDQTA 135
Query: 350 SIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDL 401
+ D + G S+ F+ H+ + S WSPH A +S D L IWD+
Sbjct: 136 KLWDPAV---GKSLRT-FKGHEGVIYSTIWSPHIPGCFASASGDQTLRIWDV 183
Score = 114 (45.2 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 36/171 (21%), Positives = 69/171 (40%)
Query: 229 FGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQW 288
F GH+ Y+ W+P PG S + + +W+ + V P H A + W
Sbjct: 149 FKGHEGVIYSTIWSPHIPGCFASASGDQTLRIWDVKAPGVRLVIP----AHQAEILSCDW 204
Query: 289 SPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGT 348
+ ++ + +VD ++ WD R + + H V + ++ + LLAS S D T
Sbjct: 205 CKYDENLLVTGAVDCSLKGWDLRNVRQPVFILLGHTYAVRRVKFSPFHATLLASCSYDFT 264
Query: 349 FSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
D + ++ E+H ++ S H+ + + D + I+
Sbjct: 265 VRFWDF---SKPNPLLETVEHHTEFTCGLDLSLHKCGQVVDCAWDELVKIY 312
Score = 42 (19.8 bits), Expect = 8.3e-14, Sum P(2) = 8.3e-14
Identities = 6/18 (33%), Positives = 11/18 (61%)
Query: 181 NPHICASWADTGHVQVWD 198
N H+ + + G +Q+WD
Sbjct: 77 NEHVLITSSGDGSLQIWD 94
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 205 (77.2 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 57/155 (36%), Positives = 78/155 (50%)
Query: 246 PGRLVSGDCNSCIHLWEPASDATWNVDPNP-FIGHAASVEDLQWSPTESDVFASCSVDGN 304
P RLVSG + + LW PA D P GH A + + +SP +S V AS S D +
Sbjct: 342 PERLVSGSDDFTLFLWSPAEDKK----PLARMTGHQALINQVVFSP-DSRVIASASFDKS 396
Query: 305 IAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVV 364
I +WD R GK L S + H A V I+W+ S LL SGS D T + D++ K +
Sbjct: 397 IKLWDGRTGKY-LASLRGHVAAVYQIAWSA-DSRLLVSGSSDSTLKVWDVKAQKLSTDLP 454
Query: 365 AHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
H + V +++WSP +G +A D L IW
Sbjct: 455 GHAD----EVYAVDWSP-DGQRVASGGKDKCLRIW 484
Score = 132 (51.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 42/175 (24%), Positives = 77/175 (44%)
Query: 231 GHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFI--GHAASVEDLQW 288
GH + ++ ++P L SG ++ + W+ +++ P+ F GH V + W
Sbjct: 113 GHSEAVISVAFSPTGK-YLASGSGDTTVRFWDLSTET-----PH-FTCQGHRHWVLSISW 165
Query: 289 SPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLAS---C-LLASGS 344
SP + + C +G I +WD GK + H+ + +SW L + C +AS S
Sbjct: 166 SPDGKKLASGCK-NGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHANPECRYVASSS 224
Query: 345 DDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
DG+ + D + ++ H + VT + W +G L +S D + +W
Sbjct: 225 KDGSVRVWDTTAGRCERTLTGHAQ----SVTCLRWGG-DG-LLYSASQDRTIKVW 273
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 204 (76.9 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 56/155 (36%), Positives = 77/155 (49%)
Query: 246 PGRLVSGDCNSCIHLWEPASDATWNVDP-NPFIGHAASVEDLQWSPTESDVFASCSVDGN 304
P RLVSG + + LW PA D P GH A + + +SP +S + AS S D +
Sbjct: 341 PERLVSGSDDFTLFLWSPAEDKK----PLTRMTGHQALINQVLFSP-DSRIVASASFDKS 395
Query: 305 IAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVV 364
I +WD R GK L S + H A V I+W+ S LL SGS D T + D++ K +
Sbjct: 396 IKLWDGRTGKY-LASLRGHVAAVYQIAWSA-DSRLLVSGSSDSTLKVWDVKAQK----LA 449
Query: 365 AHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
H V +++WSP +G +A D L IW
Sbjct: 450 MDLPGHADEVYAVDWSP-DGQRVASGGKDKCLRIW 483
Score = 126 (49.4 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 43/175 (24%), Positives = 76/175 (43%)
Query: 231 GHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFI--GHAASVEDLQW 288
GH + ++ ++P L SG ++ + W+ +++ P+ F GH V + W
Sbjct: 112 GHSEAVISVAFSPTGK-YLASGSGDTTVRFWDLSTET-----PH-FTCKGHRHWVLSISW 164
Query: 289 SPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLAS---C-LLASGS 344
SP + + C +G I +WD GK + H+ + +SW L + C +AS S
Sbjct: 165 SPDGRKLASGCK-NGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSS 223
Query: 345 DDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
DG+ I D + + H + VT + W +G L +S D + +W
Sbjct: 224 KDGSVRIWDTTAGRCERILTGHTQ----SVTCLRWGG-DG-LLYSASQDRTIKVW 272
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 203 (76.5 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 56/155 (36%), Positives = 78/155 (50%)
Query: 246 PGRLVSGDCNSCIHLWEPASDATWNVDPNP-FIGHAASVEDLQWSPTESDVFASCSVDGN 304
P RLVSG + + LW PA D P GH A + + +SP +S + AS S D +
Sbjct: 341 PERLVSGSDDFTLFLWSPAEDKK----PLARMTGHQALINQVLFSP-DSRIVASASFDKS 395
Query: 305 IAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVV 364
I +WD R GK L S + H A V I+W+ S LL SGS D T + D++ K +
Sbjct: 396 IKLWDGRTGKY-LASLRGHVAAVYQIAWSA-DSRLLVSGSSDSTLKVWDVKAQKLATDLP 453
Query: 365 AHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
H + V +++WSP +G +A D L IW
Sbjct: 454 GHAD----EVYAVDWSP-DGQRVASGGKDKCLRIW 483
Score = 135 (52.6 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 42/147 (28%), Positives = 62/147 (42%)
Query: 223 QSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAAS 282
++P GH+ +I W+P +L SG N + LW+P++ GH+
Sbjct: 146 ETPHFTCKGHRHWVLSISWSPDGK-KLASGCKNGQVLLWDPSTGLQVG---RTLTGHSKW 201
Query: 283 VEDLQWSPT----ESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASC 338
+ L W P E AS S DG++ +WDT G+ + H V + W
Sbjct: 202 ITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERI-LTGHTQSVTCLRWG--GDG 258
Query: 339 LLASGSDDGTFSI---HD---LRLLKG 359
LL S S D T + HD R L+G
Sbjct: 259 LLYSASQDRTIKVWRAHDGVLCRTLQG 285
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 203 (76.5 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 56/153 (36%), Positives = 77/153 (50%)
Query: 248 RLVSGDCNSCIHLWEPASDATWNVDPNP-FIGHAASVEDLQWSPTESDVFASCSVDGNIA 306
RLVSG + + LW PA D P GH A + + +SP +S + AS S D +I
Sbjct: 343 RLVSGSDDFTLFLWSPAEDKK----PLARMTGHQALINQVLFSP-DSRIIASASFDKSIK 397
Query: 307 IWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAH 366
+WD R GK L S + H A V I+W+ S LL SGS D T + D++ K + A
Sbjct: 398 LWDGRTGKY-LASLRGHVAAVYQIAWSA-DSRLLVSGSSDSTLKVWDVKAQK----LAAD 451
Query: 367 FEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
H V +++WSP +G +A D L IW
Sbjct: 452 LPGHADEVYAVDWSP-DGQRVASGGKDKCLRIW 483
Score = 129 (50.5 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 42/175 (24%), Positives = 76/175 (43%)
Query: 231 GHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFI--GHAASVEDLQW 288
GH + ++ ++P L SG ++ + W+ +++ P+ F GH V + W
Sbjct: 112 GHSEAVISVAFSPTGK-YLASGSGDTTVRFWDLSTET-----PH-FTCQGHRHWVLSISW 164
Query: 289 SPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLAS---C-LLASGS 344
SP + + C +G I +WD GK + H+ + +SW L + C +AS S
Sbjct: 165 SPDGKKLASGCK-NGQILLWDPSTGKQVGRALAGHSKWITALSWEPLHANPECRYVASSS 223
Query: 345 DDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
DG+ + D + + H + VT + W +G L +S D + +W
Sbjct: 224 KDGSVRVWDTTAGRCERILTGHTQ----SVTCLRWGG-DG-LLYSASQDRTIKVW 272
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 203 (76.5 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 56/155 (36%), Positives = 77/155 (49%)
Query: 246 PGRLVSGDCNSCIHLWEPASDATWNVDPNP-FIGHAASVEDLQWSPTESDVFASCSVDGN 304
P RLVSG + + LW PA D P GH A + + +SP +S + AS S D +
Sbjct: 343 PERLVSGSDDFTLFLWSPAEDKK----PLARMTGHQALINQVLFSP-DSRIVASASFDKS 397
Query: 305 IAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVV 364
I +WD R GK L S + H A V I+W+ S LL SGS D T + D++ K +
Sbjct: 398 IKLWDGRTGKY-LASLRGHVAAVYQIAWSA-DSRLLVSGSSDSTLKVWDVKAQK----LT 451
Query: 365 AHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
H V +++WSP +G +A D L IW
Sbjct: 452 TDLPGHADEVYAVDWSP-DGQRVASGGKDKCLRIW 485
Score = 137 (53.3 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 43/147 (29%), Positives = 62/147 (42%)
Query: 223 QSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAAS 282
++P GH+ +I W+P +L SG N I LW+P++ GH+
Sbjct: 148 ETPHFTCKGHRHWVLSISWSPDGK-KLASGCKNGQILLWDPSTGTQVG---RTLTGHSKW 203
Query: 283 VEDLQWSPT----ESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASC 338
+ L W P E AS S DG++ +WDT G+ + H V + W
Sbjct: 204 ITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERI-LTGHTQSVTCLRWG--GDG 260
Query: 339 LLASGSDDGTFSI---HD---LRLLKG 359
LL S S D T + HD R L+G
Sbjct: 261 LLYSASQDRTIKVWRAHDGVLCRTLQG 287
>POMBASE|SPAC29A4.18 [details] [associations]
symbol:prw1 "Clr6 histone deacetylase complex subunit
Prw1" species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=IC] [GO:0006342 "chromatin silencing"
evidence=ISO] [GO:0016575 "histone deacetylation" evidence=IMP]
[GO:0030261 "chromosome condensation" evidence=IMP] [GO:0032221
"Rpd3S complex" evidence=IDA] [GO:0033698 "Rpd3L complex"
evidence=IDA] [GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC29A4.18 GO:GO:0005829 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0000070 GO:GO:0006342 GO:GO:0030261 GO:GO:0033698
GO:GO:0070210 GO:GO:0016575 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0032221 HOGENOM:HOG000160330 PIR:T38471
RefSeq:NP_594864.1 ProteinModelPortal:O14021 DIP:DIP-29342N
IntAct:O14021 STRING:O14021 EnsemblFungi:SPAC29A4.18.1
GeneID:2541804 KEGG:spo:SPAC29A4.18 OMA:HISSHEK OrthoDB:EOG4MWCH4
NextBio:20802892 Uniprot:O14021
Length = 431
Score = 201 (75.8 bits), Expect = 6.0e-13, Sum P(2) = 6.0e-13
Identities = 72/273 (26%), Positives = 120/273 (43%)
Query: 202 HLNALA-ESETVAGHGAPQVLNQSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHL 260
H + L + E+ + + P + H ++ WN ++ G LVSG ++ +
Sbjct: 152 HNDVLVFDKESFESYSSASESPLKPKYRLTKHTQPCTSVCWNFLSKGTLVSGSQDATLSC 211
Query: 261 WE----PASDATWNVDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTR---VG 313
W+ SD+ +V H V D+++ D+ AS S D + + D R
Sbjct: 212 WDLNAYNESDSA-SVLKVHISSHEKQVSDVRFHYKHQDLLASVSYDQYLHVHDIRRPDAS 270
Query: 314 KSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHP 373
S AH+ ++ +++N +LA+ S D T ++ DLR L + + E H+
Sbjct: 271 TKPARSVHAHSGPIHSVAFNPHNDFILATCSTDKTIALWDLRNL---NQRLHTLEGHEDI 327
Query: 374 VTSIEWSPHEGSTLAVSSADNQLTIWDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLF 433
VT I +SPHE LA +SAD + +WDLS + +D PP+LLF
Sbjct: 328 VTKISFSPHEEPILASTSADRRTLVWDLSRIGED-----------QPAEEAQDGPPELLF 376
Query: 434 IHQGQKDLK-ELHWHTQVPGMIVSTAADGFNIL 465
+H G ++ W ++TAA+ NIL
Sbjct: 377 MHGGHTSCTIDMDWCPNY-NWTMATAAED-NIL 407
Score = 123 (48.4 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 37/132 (28%), Positives = 59/132 (44%)
Query: 279 HAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASC 338
H+ + + ++P + A+CS D IA+WD R L + + H V IS++
Sbjct: 280 HSGPIHSVAFNPHNDFILATCSTDKTIALWDLRNLNQRLHTLEGHEDIVTKISFSPHEEP 339
Query: 339 LLASGSDDGTFSIHDLRLLKGGDSVVAH---------FEYHKHPVTSIE--WSPHEGSTL 387
+LAS S D + DL + G D F + H +I+ W P+ T+
Sbjct: 340 ILASTSADRRTLVWDLSRI-GEDQPAEEAQDGPPELLFMHGGHTSCTIDMDWCPNYNWTM 398
Query: 388 AVSSADNQLTIW 399
A ++ DN L IW
Sbjct: 399 ATAAEDNILQIW 410
Score = 40 (19.1 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 12/59 (20%), Positives = 28/59 (47%)
Query: 160 ILQLRKVAHQGCVNRIRAMSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGHGAP 218
+L++ +H+ V+ +R ++ + AS + ++ V D R + + +V H P
Sbjct: 225 VLKVHISSHEKQVSDVRFHYKHQDLLASVSYDQYLHVHDIRRPDASTKPARSVHAHSGP 283
Score = 37 (18.1 bits), Expect = 6.0e-13, Sum P(2) = 6.0e-13
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 58 PTAYNSLHAFHIGWPCLS 75
P Y+ + + WPC+S
Sbjct: 38 PFLYDLIITRALEWPCMS 55
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 195 (73.7 bits), Expect = 6.7e-13, P = 6.7e-13
Identities = 53/179 (29%), Positives = 88/179 (49%)
Query: 223 QSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAAS 282
Q+P+++ GH+ E + +++P L SG + I++W+ D NV GH+ +
Sbjct: 45 QAPIMQLEGHEGEIFTAEFHPEGELLLSSG-FDRQIYIWQVYEDCE-NV--MAMSGHSGA 100
Query: 283 VEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLAS 342
V + ++P S +F +CS D +A WD G+ FK H VN + +R LL S
Sbjct: 101 VMEAHFTPDGSHIF-TCSTDKTLAFWDIATGQRQ-RRFKGHGNFVNSVQGSRRGQQLLCS 158
Query: 343 GSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDL 401
GSDD T I D R ++ + F+ VT++ + G + DN++ IWD+
Sbjct: 159 GSDDRTIKIWDARKKHAAHTLESPFQ-----VTAVCFGD-TGEQVISGGIDNEVKIWDI 211
Score = 117 (46.2 bits), Expect = 0.00046, P = 0.00046
Identities = 43/180 (23%), Positives = 77/180 (42%)
Query: 228 KFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQ 287
+F GH + ++ + L SG + I +W+ + +PF V +
Sbjct: 135 RFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTLESPF-----QVTAVC 189
Query: 288 WSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDG 347
+ T V + +D + IWD R ++ L + H+ + +S + +L + D+
Sbjct: 190 FGDTGEQVISG-GIDNEVKIWDIRK-QAVLHHLRGHSDTITGMSLSPEGDFILTNAMDN- 246
Query: 348 TFSIHDLRLLKGGDSVVAHFEYHKHP----VTSIEWSPHEGSTLAVS-SADNQLTIWDLS 402
T + D+R G+ V F+ H+H + WSP GS S SAD + IWD++
Sbjct: 247 TLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWSP--GSDKITSGSADRHVYIWDVN 304
Score = 116 (45.9 bits), Expect = 0.00059, P = 0.00059
Identities = 40/150 (26%), Positives = 65/150 (43%)
Query: 259 HLWEPASDAT---WNVDPNP----FIGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTR 311
H++ ++D T W++ F GH V +Q S + S S D I IWD R
Sbjct: 112 HIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDAR 171
Query: 312 VGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHK 371
K A + ++ V + + ++ SG D I D+R +V+ H H
Sbjct: 172 K-KHAAHTLESP-FQVTAVCFGDTGEQVI-SGGIDNEVKIWDIRK----QAVLHHLRGHS 224
Query: 372 HPVTSIEWSPHEGSTLAVSSADNQLTIWDL 401
+T + SP EG + ++ DN L +WD+
Sbjct: 225 DTITGMSLSP-EGDFILTNAMDNTLRVWDV 253
>UNIPROTKB|Q08DL6 [details] [associations]
symbol:PEX7 "Peroxisomal biogenesis factor 7" species:9913
"Bos taurus" [GO:0008611 "ether lipid biosynthetic process"
evidence=ISS] [GO:0016558 "protein import into peroxisome matrix"
evidence=ISS] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 GeneTree:ENSGT00700000104578
OrthoDB:EOG483D4V EMBL:DAAA02026741 EMBL:BC123679 IPI:IPI00715205
RefSeq:NP_001070358.1 UniGene:Bt.17803 STRING:Q08DL6
Ensembl:ENSBTAT00000022338 GeneID:533077 KEGG:bta:533077
InParanoid:Q08DL6 NextBio:20875902 Uniprot:Q08DL6
Length = 323
Score = 193 (73.0 bits), Expect = 8.3e-13, P = 8.3e-13
Identities = 55/174 (31%), Positives = 78/174 (44%)
Query: 236 GYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPF-IGHAASVE------DLQW 288
GYA +++P PGRL C + H S +D N + S + D+ W
Sbjct: 19 GYAAEFSPYLPGRLA---CAASQHYGIAGSGTLLILDQNESGLRLFRSFDWNDGLFDVTW 75
Query: 289 SPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRL-ASCLLASGSDDG 347
S V +CS DG++ +WDT L FK H +V + W++ L+ SGS D
Sbjct: 76 SENNEHVLVTCSGDGSLQLWDTARATGPLQVFKEHTQEVYSVDWSQTRGEQLVVSGSWDQ 135
Query: 348 TFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDL 401
T + D + G S+ F H+ + S WSPH A SS D L IWD+
Sbjct: 136 TVKLWDPTV---GKSLCT-FRGHESVIYSTIWSPHIPGCFASSSGDQTLRIWDV 185
Score = 184 (69.8 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 55/197 (27%), Positives = 89/197 (45%)
Query: 211 TVAGHGAPQVLNQS----PLVKFGGHKDEGYAIDWNPVAPGRLV-SGDCNSCIHLWEPAS 265
T +G G+ Q+ + + PL F H E Y++DW+ +LV SG + + LW+P
Sbjct: 85 TCSGDGSLQLWDTARATGPLQVFKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDP-- 142
Query: 266 DATWNVDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNA 325
T F GH + + WSP FAS S D + IWD + ++ AH A
Sbjct: 143 --TVGKSLCTFRGHESVIYSTIWSPHIPGCFASSSGDQTLRIWDVKTTGVRIV-VPAHQA 199
Query: 326 DVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGS 385
++ W + L+ +G+ D + DLR ++ V H + + +++SP S
Sbjct: 200 EILSCDWCKYNENLVVTGAVDCSLRGWDLRNVQ---QPVFELLGHTYAIRRVKFSPFHAS 256
Query: 386 TLAVSSADNQLTIWDLS 402
LA S D + W+ S
Sbjct: 257 VLASCSYDFTVRFWNFS 273
Score = 42 (19.8 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 6/18 (33%), Positives = 11/18 (61%)
Query: 181 NPHICASWADTGHVQVWD 198
N H+ + + G +Q+WD
Sbjct: 79 NEHVLVTCSGDGSLQLWD 96
>UNIPROTKB|O00628 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:9606 "Homo sapiens" [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0008611
"ether lipid biosynthetic process" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=IDA]
[GO:0016558 "protein import into peroxisome matrix"
evidence=IDA;IMP] [GO:0007031 "peroxisome organization"
evidence=IMP] [GO:0005777 "peroxisome" evidence=IDA] [GO:0019899
"enzyme binding" evidence=IPI] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0005782 "peroxisomal
matrix" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 GO:GO:0042803 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 Orphanet:177 GO:GO:0016558 GO:GO:0001958 Orphanet:773
TCDB:3.A.20.1.1 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U88871 EMBL:U76560
EMBL:AF180814 EMBL:AF180806 EMBL:AF180807 EMBL:AF180808
EMBL:AF180809 EMBL:AF180810 EMBL:AF180811 EMBL:AF180812
EMBL:AF180813 EMBL:BC006268 IPI:IPI00012577 RefSeq:NP_000279.1
UniGene:Hs.280932 ProteinModelPortal:O00628 SMR:O00628
IntAct:O00628 STRING:O00628 PhosphoSite:O00628 PRIDE:O00628
DNASU:5191 Ensembl:ENST00000318471 GeneID:5191 KEGG:hsa:5191
UCSC:uc003qhd.3 GeneCards:GC06P137185 HGNC:HGNC:8860 HPA:HPA049202
MIM:215100 MIM:601757 MIM:614879 neXtProt:NX_O00628
PharmGKB:PA33202 InParanoid:O00628 PhylomeDB:O00628 GenomeRNAi:5191
NextBio:20076 ArrayExpress:O00628 Bgee:O00628 CleanEx:HS_PEX7
Genevestigator:O00628 GermOnline:ENSG00000112357 Uniprot:O00628
Length = 323
Score = 189 (71.6 bits), Expect = 8.9e-13, Sum P(2) = 8.9e-13
Identities = 55/197 (27%), Positives = 89/197 (45%)
Query: 211 TVAGHGAPQVLNQS----PLVKFGGHKDEGYAIDWNPVAPGRLV-SGDCNSCIHLWEPAS 265
T +G G+ Q+ + + PL + H E Y++DW+ +LV SG + + LW+P
Sbjct: 85 TCSGDGSLQLWDTAKAAGPLQVYKEHAQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDP-- 142
Query: 266 DATWNVDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNA 325
T F GH + + WSP FAS S D + IWD + ++ AH A
Sbjct: 143 --TVGKSLCTFRGHESIIYSTIWSPHIPGCFASASGDQTLRIWDVKAAGVRIV-IPAHQA 199
Query: 326 DVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGS 385
++ W + LL +G+ D + DLR ++ V H + + +++SP S
Sbjct: 200 EILSCDWCKYNENLLVTGAVDCSLRGWDLRNVR---QPVFELLGHTYAIRRVKFSPFHAS 256
Query: 386 TLAVSSADNQLTIWDLS 402
LA S D + W+ S
Sbjct: 257 VLASCSYDFTVRFWNFS 273
Score = 183 (69.5 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 52/174 (29%), Positives = 78/174 (44%)
Query: 236 GYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPF-IGHAASVE------DLQW 288
GYA +++P PGRL C + H +DP+ + S + D+ W
Sbjct: 19 GYAAEFSPYLPGRLA---CATAQHYGIAGCGTLLILDPDEAGLRLFRSFDWNDGLFDVTW 75
Query: 289 SPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRL-ASCLLASGSDDG 347
S V +CS DG++ +WDT L +K H +V + W++ L+ SGS D
Sbjct: 76 SENNEHVLITCSGDGSLQLWDTAKAAGPLQVYKEHAQEVYSVDWSQTRGEQLVVSGSWDQ 135
Query: 348 TFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDL 401
T + D + G S+ F H+ + S WSPH A +S D L IWD+
Sbjct: 136 TVKLWDPTV---GKSLCT-FRGHESIIYSTIWSPHIPGCFASASGDQTLRIWDV 185
Score = 131 (51.2 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 39/175 (22%), Positives = 74/175 (42%)
Query: 226 LVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVED 285
L F GH+ Y+ W+P PG S + + +W+ + V P H A +
Sbjct: 148 LCTFRGHESIIYSTIWSPHIPGCFASASGDQTLRIWDVKAAGVRIVIP----AHQAEILS 203
Query: 286 LQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSD 345
W ++ + +VD ++ WD R + + H + + ++ + +LAS S
Sbjct: 204 CDWCKYNENLLVTGAVDCSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSY 263
Query: 346 DGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWD 400
D F++ K DS++ E+H +++S + +A S D + I+D
Sbjct: 264 D--FTVRFWNFSKP-DSLLETVEHHTEFTCGLDFSLQSPTQVADCSWDETIKIYD 315
Score = 41 (19.5 bits), Expect = 8.9e-13, Sum P(2) = 8.9e-13
Identities = 6/18 (33%), Positives = 11/18 (61%)
Query: 181 NPHICASWADTGHVQVWD 198
N H+ + + G +Q+WD
Sbjct: 79 NEHVLITCSGDGSLQLWD 96
>UNIPROTKB|E2QYX6 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AAEX03000193
RefSeq:XP_541117.2 Ensembl:ENSCAFT00000000399 GeneID:484000
KEGG:cfa:484000 NextBio:20858274 Uniprot:E2QYX6
Length = 323
Score = 186 (70.5 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 55/197 (27%), Positives = 88/197 (44%)
Query: 211 TVAGHGAPQVLNQS----PLVKFGGHKDEGYAIDWNPVAPGRLV-SGDCNSCIHLWEPAS 265
T +G G+ Q+ + + PL + H E Y++DW+ +LV SG + + LW+P
Sbjct: 85 TCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDP-- 142
Query: 266 DATWNVDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNA 325
T F GH + + WSP FAS S D + IWD + + AH A
Sbjct: 143 --TVGKSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDVK-STGVRIVVPAHQA 199
Query: 326 DVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGS 385
++ W + LL +G+ D + DLR ++ V H + + +++SP S
Sbjct: 200 EILSCDWCKYNENLLVTGAVDCSLRGWDLRNVR---QPVFELLGHTYAIRRVKFSPFHAS 256
Query: 386 TLAVSSADNQLTIWDLS 402
LA S D + W+ S
Sbjct: 257 VLASCSYDFTVRFWNFS 273
Score = 183 (69.5 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 51/174 (29%), Positives = 77/174 (44%)
Query: 236 GYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPF-IGHAASVE------DLQW 288
GYA +++P PGRL C + H +D N + S + D+ W
Sbjct: 19 GYAAEFSPYLPGRLA---CAAAQHYGIAGCGTLLILDQNESGLRLFRSFDWNDGLFDVTW 75
Query: 289 SPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRL-ASCLLASGSDDG 347
S + +CS DG++ +WDT L +K H +V + W++ L+ SGS D
Sbjct: 76 SENNEHILVTCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSVDWSQTRGEQLVVSGSWDQ 135
Query: 348 TFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDL 401
T + D + G S+ F H+ + S WSPH A +S D L IWD+
Sbjct: 136 TVKLWDPTV---GKSLCT-FRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDV 185
Score = 43 (20.2 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 181 NPHICASWADTGHVQVWD 198
N HI + + G +Q+WD
Sbjct: 79 NEHILVTCSGDGSLQLWD 96
>FB|FBgn0035922 [details] [associations]
symbol:Pex7 "Peroxin 7" species:7227 "Drosophila
melanogaster" [GO:0007031 "peroxisome organization" evidence=ISS]
[GO:0005053 "peroxisome matrix targeting signal-2 binding"
evidence=ISS] [GO:0005777 "peroxisome" evidence=ISS] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA] [GO:0006911
"phagocytosis, engulfment" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006911 EMBL:AE014296 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016558 KO:K13341
OMA:GHEYAVR GO:GO:0005053 PANTHER:PTHR22850:SF4
GeneTree:ENSGT00700000104578 RefSeq:NP_001137914.1
RefSeq:NP_648251.1 UniGene:Dm.15472 SMR:Q9VSN7 DIP:DIP-21383N
IntAct:Q9VSN7 MINT:MINT-790667 STRING:Q9VSN7
EnsemblMetazoa:FBtr0076568 EnsemblMetazoa:FBtr0273328 GeneID:38994
KEGG:dme:Dmel_CG6486 UCSC:CG6486-RA FlyBase:FBgn0035922
InParanoid:Q9VSN7 OrthoDB:EOG431ZDN ChiTaRS:CG6486 GenomeRNAi:38994
NextBio:811365 Uniprot:Q9VSN7
Length = 339
Score = 192 (72.6 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 53/186 (28%), Positives = 89/186 (47%)
Query: 219 QVLNQSPLVKFGGHKDEGYAIDWNPVAPGR-LVSGDCNSCIHLWEPASDATWNVDPNPFI 277
Q+ + PL+ HK+E Y++DW L+SG + + LW D F+
Sbjct: 109 QLTPKQPLICLQEHKNEVYSLDWGEKWNYHTLLSGSWDCTLKLW----DCNRQNSITTFV 164
Query: 278 GHAASVEDLQWSPTESDVFASCSVDGNIAIWDTR--VGKSALMSFKAHNADVNVISWNRL 335
GH + ++SP +++FAS S DG++ +W++ GK LMS +AH ++ W+
Sbjct: 165 GHNDLIYGAKFSPLIANLFASVSTDGHLNLWNSLDFAGKP-LMSIEAHASEALCCDWSHF 223
Query: 336 ASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQ 395
+L +G DG DLR ++ + V + V + SPH + LA ++ D
Sbjct: 224 DRNVLVTGGSDGLIRGWDLRKMR---THVFELYSGEFAVRRLACSPHSAAVLASANYDFT 280
Query: 396 LTIWDL 401
IW+L
Sbjct: 281 TRIWNL 286
Score = 118 (46.6 bits), Expect = 0.00034, P = 0.00034
Identities = 42/178 (23%), Positives = 73/178 (41%)
Query: 223 QSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFI-GHAA 281
Q+ + F GH D Y ++P+ S + ++LW A P I HA+
Sbjct: 157 QNSITTFVGHNDLIYGAKFSPLIANLFASVSTDGHLNLWNSLDFAG---KPLMSIEAHAS 213
Query: 282 SVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLA 341
WS + +V + DG I WD R ++ + + V ++ + ++ +LA
Sbjct: 214 EALCCDWSHFDRNVLVTGGSDGLIRGWDLRKMRTHVFELYSGEFAVRRLACSPHSAAVLA 273
Query: 342 SGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
S + D T I +L + V A H V ++W+PH LA D+ ++
Sbjct: 274 SANYDFTTRIWNLERGESAQEVNAR---HTEFVCGLDWNPHRTHQLADCGWDSLANVY 328
>RGD|1308483 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10116
"Rattus norvegicus" [GO:0001764 "neuron migration"
evidence=IEA;ISO] [GO:0001958 "endochondral ossification"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005053 "peroxisome matrix targeting signal-2 binding"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005777 "peroxisome" evidence=ISO] [GO:0005782 "peroxisomal
matrix" evidence=IEA;ISO] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0006625 "protein targeting to peroxisome" evidence=ISO]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA;ISO]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008611 "ether lipid
biosynthetic process" evidence=IEA;ISO] [GO:0016558 "protein import
into peroxisome matrix" evidence=IEA;ISO] [GO:0019899 "enzyme
binding" evidence=IEA;ISO] [GO:0042803 "protein homodimerization
activity" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1308483 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 GeneTree:ENSGT00700000104578
OrthoDB:EOG483D4V EMBL:BC100091 IPI:IPI00367874
RefSeq:NP_001029319.1 UniGene:Rn.162402 STRING:Q498S5
Ensembl:ENSRNOT00000016728 GeneID:308718 KEGG:rno:308718
UCSC:RGD:1308483 InParanoid:Q498S5 NextBio:659419
Genevestigator:Q498S5 Uniprot:Q498S5
Length = 318
Score = 190 (71.9 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 52/174 (29%), Positives = 79/174 (45%)
Query: 236 GYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPF-IGHAASVE------DLQW 288
GYA++++P PGRL C + H +D N + S + D+ W
Sbjct: 14 GYAVEFSPYLPGRLA---CAAAQHYGIAGCGTLLVLDQNESGLQIFRSFDWNDGLFDVTW 70
Query: 289 SPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLAS-CLLASGSDDG 347
S V +CS DG++ +WDT L +K H +V + W++ L+ SGS D
Sbjct: 71 SENNEHVLVTCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSVDWSQTRDEQLVVSGSWDQ 130
Query: 348 TFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDL 401
T + D + G+S+ F H+ + S WSPH A +S D L IWD+
Sbjct: 131 TVKVWDPTV---GNSLCT-FRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDV 180
Score = 184 (69.8 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 54/197 (27%), Positives = 89/197 (45%)
Query: 211 TVAGHGAPQVLNQS----PLVKFGGHKDEGYAIDWNPVAPGRLV-SGDCNSCIHLWEPAS 265
T +G G+ Q+ + + PL + H E Y++DW+ +LV SG + + +W+P
Sbjct: 80 TCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSVDWSQTRDEQLVVSGSWDQTVKVWDP-- 137
Query: 266 DATWNVDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNA 325
T F GH + + WSP FAS S D + IWD + ++ AH A
Sbjct: 138 --TVGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDVKTTGVRIV-IPAHQA 194
Query: 326 DVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGS 385
++ W + LL +G+ D + DLR ++ V H + + +++SP S
Sbjct: 195 EILSCDWCKYNENLLVTGAVDCSLRGWDLRNVR---QPVFELLGHTYAIRRVKFSPFHAS 251
Query: 386 TLAVSSADNQLTIWDLS 402
LA S D + W+ S
Sbjct: 252 VLASCSYDFTVRFWNFS 268
Score = 42 (19.8 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 6/18 (33%), Positives = 11/18 (61%)
Query: 181 NPHICASWADTGHVQVWD 198
N H+ + + G +Q+WD
Sbjct: 74 NEHVLVTCSGDGSLQLWD 91
>UNIPROTKB|Q8R537 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:10029 "Cricetulus griseus" [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=ISS] [GO:0008611 "ether lipid
biosynthetic process" evidence=ISS] [GO:0016558 "protein import
into peroxisome matrix" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008611 GO:GO:0016558
EMBL:AB042621 RefSeq:NP_001231782.1 ProteinModelPortal:Q8R537
GeneID:100736556 CTD:5191 HOVERGEN:HBG003354 GO:GO:0005053
Uniprot:Q8R537
Length = 318
Score = 188 (71.2 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 52/174 (29%), Positives = 78/174 (44%)
Query: 236 GYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNP-----F--IGHAASVEDLQW 288
GYA +++P PGRL C + H +D N F + + D+ W
Sbjct: 14 GYAAEFSPYLPGRLA---CAAAQHYGIAGCGTLIILDQNQSGLQIFRSFDWSDGLFDVTW 70
Query: 289 SPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRL-ASCLLASGSDDG 347
S V +CS DG++ +WDT L +K H +V + W++ L+ SGS D
Sbjct: 71 SEDNEHVLVTCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSVDWSQTRGEQLVVSGSWDQ 130
Query: 348 TFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDL 401
T + D + G+S+ F H+ + S WSPH A +S D L IWD+
Sbjct: 131 TVKVWDPTV---GNSLCT-FRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDV 180
Score = 178 (67.7 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 52/197 (26%), Positives = 88/197 (44%)
Query: 211 TVAGHGAPQVLNQS----PLVKFGGHKDEGYAIDWNPVAPGRLV-SGDCNSCIHLWEPAS 265
T +G G+ Q+ + + PL + H E Y++DW+ +LV SG + + +W+P
Sbjct: 80 TCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKVWDP-- 137
Query: 266 DATWNVDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNA 325
T F GH + + WSP FAS S D + IWD + ++ AH
Sbjct: 138 --TVGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDVKTAGVRIV-IPAHQT 194
Query: 326 DVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGS 385
++ W + L+ +G+ D + DLR ++ V H + + +++SP S
Sbjct: 195 EILSCDWCKYNENLVVTGAVDCSLRGWDLRNVR---QPVFELLGHTYAIRRVKFSPFHAS 251
Query: 386 TLAVSSADNQLTIWDLS 402
LA S D + W+ S
Sbjct: 252 VLASCSYDFTVRFWNFS 268
Score = 42 (19.8 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 6/18 (33%), Positives = 11/18 (61%)
Query: 181 NPHICASWADTGHVQVWD 198
N H+ + + G +Q+WD
Sbjct: 74 NEHVLVTCSGDGSLQLWD 91
>UNIPROTKB|F1S687 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 OMA:GHEYAVR GO:GO:0005053
GeneTree:ENSGT00700000104578 EMBL:CU407212
ProteinModelPortal:F1S687 Ensembl:ENSSSCT00000004599 Uniprot:F1S687
Length = 315
Score = 184 (69.8 bits), Expect = 8.5e-12, P = 8.5e-12
Identities = 52/174 (29%), Positives = 78/174 (44%)
Query: 236 GYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNP-----F--IGHAASVEDLQW 288
GYA +++P PGRL C + H +D N F ++ D+ W
Sbjct: 19 GYAAEFSPYLPGRLA---CAAAQHYGIAGCGTLLILDHNESGLRIFRSFDWTDALFDVTW 75
Query: 289 SPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRL-ASCLLASGSDDG 347
S V +CS DG++ +WDT L +K H +V + W++ L+ SGS D
Sbjct: 76 SENNEHVLVTCSGDGSLQLWDTAGAAGPLQVYKEHTQEVYSVDWSQTRGEQLVVSGSWDQ 135
Query: 348 TFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDL 401
T + D + G S+ F+ H+ + S WSPH A +S D L IWD+
Sbjct: 136 TVKLWDPTV---GRSLCT-FKGHESIIYSTIWSPHIPGCFASASGDQTLRIWDV 185
Score = 183 (69.5 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 54/197 (27%), Positives = 89/197 (45%)
Query: 211 TVAGHGAPQVLNQS----PLVKFGGHKDEGYAIDWNPVAPGRLV-SGDCNSCIHLWEPAS 265
T +G G+ Q+ + + PL + H E Y++DW+ +LV SG + + LW+P
Sbjct: 85 TCSGDGSLQLWDTAGAAGPLQVYKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPTV 144
Query: 266 DATWNVDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNA 325
+ F GH + + WSP FAS S D + IWD + ++ AH A
Sbjct: 145 GRSLCT----FKGHESIIYSTIWSPHIPGCFASASGDQTLRIWDVKTTGVRIV-VPAHQA 199
Query: 326 DVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGS 385
++ W + LL +G+ D + DLR ++ V H + + +++SP S
Sbjct: 200 EILSCDWCKYNENLLVTGAVDCSLRGWDLRNVR---QPVFELLGHTYAIRRVKFSPFYAS 256
Query: 386 TLAVSSADNQLTIWDLS 402
LA S D + W+ S
Sbjct: 257 VLASCSYDFTVRFWNFS 273
Score = 42 (19.8 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 6/18 (33%), Positives = 11/18 (61%)
Query: 181 NPHICASWADTGHVQVWD 198
N H+ + + G +Q+WD
Sbjct: 79 NEHVLVTCSGDGSLQLWD 96
>MGI|MGI:1321392 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10090
"Mus musculus" [GO:0001764 "neuron migration" evidence=IMP]
[GO:0001958 "endochondral ossification" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005782 "peroxisomal matrix" evidence=ISO]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006625 "protein
targeting to peroxisome" evidence=IMP] [GO:0006635 "fatty acid
beta-oxidation" evidence=IMP] [GO:0006810 "transport" evidence=IEA]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008611
"ether lipid biosynthetic process" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016558 "protein import into
peroxisome matrix" evidence=ISO;IMP] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1321392 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U69171 EMBL:BC132213
EMBL:BC132503 IPI:IPI00130134 RefSeq:NP_032848.1 UniGene:Mm.338363
ProteinModelPortal:P97865 SMR:P97865 STRING:P97865
PhosphoSite:P97865 PaxDb:P97865 PRIDE:P97865
Ensembl:ENSMUST00000020182 GeneID:18634 KEGG:mmu:18634
UCSC:uc007enl.2 GeneTree:ENSGT00700000104578 InParanoid:A2RSR2
OrthoDB:EOG483D4V NextBio:294604 Bgee:P97865 CleanEx:MM_PEX7
Genevestigator:P97865 GermOnline:ENSMUSG00000020003 Uniprot:P97865
Length = 318
Score = 187 (70.9 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 52/174 (29%), Positives = 78/174 (44%)
Query: 236 GYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPF-IGHAASVE------DLQW 288
GYA +++P PGRL C + H +D N + S + D+ W
Sbjct: 14 GYAAEFSPYLPGRLA---CAAAQHYGIAGCGTLLVLDQNESGLQIFRSFDWNDGLFDVTW 70
Query: 289 SPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRL-ASCLLASGSDDG 347
S V +CS DG++ +WDT L +K H +V + W++ L+ SGS D
Sbjct: 71 SENNEHVLVTCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSVDWSQTRGEQLVVSGSWDQ 130
Query: 348 TFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDL 401
T + D + G+S+ F H+ + S WSPH A +S D L IWD+
Sbjct: 131 TVKVWDPTV---GNSLCT-FRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDV 180
Score = 176 (67.0 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 52/197 (26%), Positives = 88/197 (44%)
Query: 211 TVAGHGAPQVLNQS----PLVKFGGHKDEGYAIDWNPVAPGRLV-SGDCNSCIHLWEPAS 265
T +G G+ Q+ + + PL + H E Y++DW+ +LV SG + + +W+P
Sbjct: 80 TCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKVWDP-- 137
Query: 266 DATWNVDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNA 325
T F GH + + WSP FAS S D + IWD + ++ AH
Sbjct: 138 --TVGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDVKTTGVRIV-IPAHQT 194
Query: 326 DVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGS 385
++ W + L+ +G+ D + DLR ++ V H + + +++SP S
Sbjct: 195 EILSCDWCKYNENLVVTGAVDCSLRGWDLRNVR---QPVFELLGHTYAIRRVKFSPFHAS 251
Query: 386 TLAVSSADNQLTIWDLS 402
LA S D + W+ S
Sbjct: 252 VLASCSYDFTVRFWNFS 268
Score = 42 (19.8 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 6/18 (33%), Positives = 11/18 (61%)
Query: 181 NPHICASWADTGHVQVWD 198
N H+ + + G +Q+WD
Sbjct: 74 NEHVLVTCSGDGSLQLWD 91
>UNIPROTKB|B0XAF3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7176 "Culex quinquefasciatus"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:DS232580 RefSeq:XP_001866625.1 UniGene:Cpi.8879
ProteinModelPortal:B0XAF3 STRING:B0XAF3
EnsemblMetazoa:CPIJ016096-RA GeneID:6049938
KEGG:cqu:CpipJ_CPIJ016096 VectorBase:CPIJ016096 PhylomeDB:B0XAF3
Uniprot:B0XAF3
Length = 338
Score = 188 (71.2 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 50/172 (29%), Positives = 80/172 (46%)
Query: 231 GHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFI--GHAASVEDLQW 288
GH+ + W+P P G+ + I +W A D T P + GH ++ D+ W
Sbjct: 12 GHRGRVWGAGWHPRDPVLATCGE-DKTIRIW--ADDGTGRWVPKTVLSDGHTRTIRDVAW 68
Query: 289 SPTESDVFASCSVDGNIAIWDTRVGK-SALMSFKAHNADVNVISWNRLASCLLASGSDDG 347
SP AS S D +AIWD R G+ + + H +V +SW++ + LLA+ S D
Sbjct: 69 SPC-GRFLASASFDATVAIWDRRSGEFECNATLEGHENEVKSVSWSK-SGALLATCSRDK 126
Query: 348 TFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
+ I ++ + A H V +EW P+E LA +S DN + ++
Sbjct: 127 SVWIWEVAQ-EDEYECAAVLNTHSQDVKKVEWHPNE-DVLASASYDNTIQLY 176
Score = 120 (47.3 bits), Expect = 0.00020, P = 0.00020
Identities = 60/243 (24%), Positives = 101/243 (41%)
Query: 231 GHKDEGYAIDWNPVAPGRLVSGDCN--SCIHLWEPASDATWNVDPNPFIGHAASVEDLQW 288
GH++E ++ W+ G L++ C+ + +WE A + + H+ V+ ++W
Sbjct: 102 GHENEVKSVSWSK--SGALLA-TCSRDKSVWIWEVAQEDEYECAA-VLNTHSQDVKKVEW 157
Query: 289 SPTESDVFASCSVDGNIAIWDTRVGKSALMSFK---AHNADVNVISWNRLASCLLASGSD 345
P E DV AS S D I ++ + S SF +H++ V I+++ S LAS SD
Sbjct: 158 HPNE-DVLASASYDNTIQLYREDLADSDWSSFDTLASHDSTVWSIAFDASGS-RLASCSD 215
Query: 346 DGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLSLXX 405
D T I G + VA + K PV W + S + ++D+S
Sbjct: 216 DQTVRIWQ-EYKPGNEFGVACPD-GKTPV----WK-----CVCTLSGFHSRAVYDISWCK 264
Query: 406 XXXXXXXXXXXT-----REQVNAPEDLPP--QLLFIHQGQKDLKELHWHTQVPGMIVSTA 458
RE +P + P + H +D + W V G++V+T+
Sbjct: 265 KTGLIATACGDDMVRIFREVAGSPANEPTFEMVASKHAHSQDANTVEWSPTVAGLLVTTS 324
Query: 459 ADG 461
DG
Sbjct: 325 DDG 327
>ASPGD|ASPL0000041012 [details] [associations]
symbol:AN9085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
HOGENOM:HOG000091644 OMA:HAGSVNE ProteinModelPortal:C8VH61
EnsemblFungi:CADANIAT00009529 Uniprot:C8VH61
Length = 359
Score = 185 (70.2 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 53/183 (28%), Positives = 86/183 (46%)
Query: 221 LNQSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFI--G 278
LN +P+++ GH E +A+ ++P A + SG + I LW T+ N I G
Sbjct: 55 LN-APIMELTGHSGEVFAVRFDPTAQ-HIASGSMDRSILLWN-----TYGQCENYGILSG 107
Query: 279 HAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASC 338
H ++ DLQWS +F S S D +A WD G+ + + H +N + ++
Sbjct: 108 HKGAILDLQWSRDSKTIF-SASADMTLASWDIESGQR-IRRYIGHEEVINSVEISKRGQE 165
Query: 339 LLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTI 398
+L S SDDGT I D R + D + P+T++ S G+ + DN + +
Sbjct: 166 MLVSASDDGTMGIWDPRQKEAIDYLETEL-----PITAVAQS-EAGNEVFSGGIDNAIHV 219
Query: 399 WDL 401
WD+
Sbjct: 220 WDI 222
Score = 119 (46.9 bits), Expect = 0.00029, P = 0.00029
Identities = 34/139 (24%), Positives = 64/139 (46%)
Query: 267 ATWNVDPNP----FIGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKA 322
A+W+++ +IGH + ++ S ++ S S DG + IWD R K A+ +
Sbjct: 134 ASWDIESGQRIRRYIGHEEVINSVEISKRGQEMLVSASDDGTMGIWDPRQ-KEAI-DYLE 191
Query: 323 HNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPH 382
+ ++ + + + SG D + D+R ++V H +TS+E SP
Sbjct: 192 TELPITAVAQSEAGNEVF-SGGIDNAIHVWDIRK----KAIVYSMAGHMDTITSLEVSP- 245
Query: 383 EGSTLAVSSADNQLTIWDL 401
+ TL +S D+ + WD+
Sbjct: 246 DSQTLLSNSFDSTVRTWDI 264
Score = 109 (43.4 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 39/164 (23%), Positives = 70/164 (42%)
Query: 245 APGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFASCSVDGN 304
A + SG ++ IH+W+ A GH ++ L+ SP +S S S D
Sbjct: 204 AGNEVFSGGIDNAIHVWDIRKKAI----VYSMAGHMDTITSLEVSP-DSQTLLSNSFDST 258
Query: 305 IAIWDTRVGKSALMSFKAHNA-----DVNVI--SWNRLASCLLASGSDDGTFSIHDLRLL 357
+ WD R + ++ + N+I SWN A +A+GS D + + D +
Sbjct: 259 VRTWDIRPFAPTNRHIRTYDGAPVGLEKNLIRASWNP-AGDKIAAGSGDRSVVVWDFKTG 317
Query: 358 KGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDL 401
K ++ HK V + ++P+ + +S+D L + +L
Sbjct: 318 K----ILYKLPGHKGTVNDVRFTPNNEPIIVSASSDRNLMLGEL 357
Score = 53 (23.7 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 9/37 (24%), Positives = 18/37 (48%)
Query: 164 RKVAHQGCVNRIRAMSQNPHICASWADTGHVQVWDFR 200
R + H+ +N + + + S +D G + +WD R
Sbjct: 146 RYIGHEEVINSVEISKRGQEMLVSASDDGTMGIWDPR 182
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 184 (69.8 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 55/203 (27%), Positives = 96/203 (47%)
Query: 200 RSHLNALAESETVAGHGAPQVLN-QSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCI 258
R+ L A A+S+ ++ G P+ + Q+P++ GH+ E Y ++P L S + I
Sbjct: 22 RTELVAAAQSQQLSAMGPPRSSSLQAPIMLLSGHEGEVYCCKFHPNG-ATLASSGYDRLI 80
Query: 259 HLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALM 318
+W D + GH+ +V +L ++ T+ + S S D + +WD+ G+ +
Sbjct: 81 LMWNVYGDCE---NYATLKGHSGAVMELHYN-TDGSLLFSASTDKTVCVWDSETGER-VK 135
Query: 319 SFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIE 378
K H + VN R L +GSDDGT + D+R K SV H + + V S+
Sbjct: 136 RLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWDIRK-KA--SV--HTFQNTYQVLSVT 190
Query: 379 WSPHEGSTLAVSSADNQLTIWDL 401
++ ++ DN + +WDL
Sbjct: 191 FNDTSDQIIS-GGIDNDIKVWDL 212
Score = 121 (47.7 bits), Expect = 0.00016, P = 0.00016
Identities = 43/159 (27%), Positives = 70/159 (44%)
Query: 246 PGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNI 305
P +G + + LW+ A+ + N + V + ++ T SD S +D +I
Sbjct: 154 PQLACTGSDDGTVKLWDIRKKASVHTFQNTY-----QVLSVTFNDT-SDQIISGGIDNDI 207
Query: 306 AIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVA 365
+WD R K + S + H V +S + S LL S S D + + D+R + V
Sbjct: 208 KVWDLRQNK-LIYSMQGHGDSVTGLSLSADGSYLL-SNSMDNSVRVWDIRPFAPKERCVK 265
Query: 366 HFEYHKHP----VTSIEWSPHEGSTLAVSSADNQLTIWD 400
F+ + H + WS +GS +A SAD + IWD
Sbjct: 266 IFQGNVHNFEKNLLRCSWSA-DGSKIAAGSADRFVYIWD 303
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 187 (70.9 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 53/155 (34%), Positives = 74/155 (47%)
Query: 246 PGRLVSGDCNSCIHLWEPASDATWNVDP-NPFIGHAASVEDLQWSPTESDVFASCSVDGN 304
P RLVSG + + LW PA D P GH A + + +SP ++ + AS S D +
Sbjct: 354 PERLVSGSDDFTLFLWRPAEDKK----PLERMTGHQALINQVLFSP-DTRIIASASFDKS 408
Query: 305 IAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVV 364
I +W+ R GK L S + H + V I+W+ S LL SGS D T + D K +
Sbjct: 409 IKLWEGRTGKY-LTSLRGHVSAVYQIAWSA-DSRLLVSGSSDSTLKVWDAETKK----LA 462
Query: 365 AHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
H V + +WSP +G +A D L IW
Sbjct: 463 IDLPGHADEVFATDWSP-DGQRVASGGKDKCLRIW 496
Score = 149 (57.5 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 49/163 (30%), Positives = 72/163 (44%)
Query: 223 QSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAAS 282
++P GH+ +I W+P +L SG NS I LW+PA T N GH+
Sbjct: 159 ETPQFTAKGHRHWVLSIAWSPDGK-KLASGCKNSQIFLWDPA---TGNQIGRVLTGHSKW 214
Query: 283 VEDLQWSPT----ESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASC 338
+ L W P E AS S DG+I IWDT +G+ + H V + W
Sbjct: 215 ITCLCWEPLHINPECRYLASASKDGSIRIWDTLMGRCDKI-LTGHTQSVTCVKWG--GDG 271
Query: 339 LLASGSDDGTFSIHDLRLLKGGDSVVAH-FEYHKHPVTSIEWS 380
LL S S D T +++ + D ++ + H H V ++ S
Sbjct: 272 LLYSSSQDRT-----IKVWRSQDGILCRTLQGHAHWVNTMALS 309
>GENEDB_PFALCIPARUM|PFA0520c [details] [associations]
symbol:PFA0520c "chromatin assembly factor 1
protein WD40 domain, putative" species:5833 "Plasmodium falciparum"
[GO:0051082 "unfolded protein binding" evidence=ISS] [GO:0042393
"histone binding" evidence=ISS] [GO:0006334 "nucleosome assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0051082
GO:GO:0042393 GO:GO:0006334 GO:GO:0005678 KO:K10752
InterPro:IPR022052 Pfam:PF12265 EMBL:AL844501 OMA:VLYDLVI
RefSeq:XP_001351036.1 ProteinModelPortal:Q8I238 PRIDE:Q8I238
EnsemblProtists:PFA0520c:mRNA GeneID:813241 KEGG:pfa:PFA_0520c
HOGENOM:HOG000283790 ProtClustDB:CLSZ2433094 Uniprot:Q8I238
Length = 446
Score = 181 (68.8 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 80/319 (25%), Positives = 147/319 (46%)
Query: 165 KVAHQGCVNRIRAMSQNPHICASWADTGHVQVWDFRSHLNALAES--ETVAGHGAPQVLN 222
K+AH G VNRI+ + P ++ T V D HL + + ETV
Sbjct: 148 KIAHTGEVNRIKFV---PLEKKNFVVTKAV---DGNVHLFDINKHKIETVDD-------K 194
Query: 223 QSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAAS 282
+P V F G++ +G+ +D+ P+ L + + I++++ + T V P + + +
Sbjct: 195 MNPEVSFVGNQSDGFGLDFQPIKKYILTCAN-DGLINVYDYNTLNTKTVQPFYKVQYKSP 253
Query: 283 VEDLQWSPT-ESDVFASCSVDGNIAIWDTRV-GKSALMSFKAHNADVNVISWNRLASCLL 340
V D+ SPT + ++ +C+ +G I I+D R+ VN ++ N L
Sbjct: 254 VNDI--SPTNDPNLILACADNGYILIFDFRIKSNEPAQQTLGQQVPVNTVALNTFTG-LF 310
Query: 341 ASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWD 400
ASGSD+G + DL+ ++ HK + + +SP++ S LA +S + + ++D
Sbjct: 311 ASGSDNGKIKVWDLKKFHEPQHII---NAHKEAIIRLNFSPNDASILASASNNRFINVYD 367
Query: 401 LSLXXXXXXXXXXXXXTREQVNAPE--DLPPQLLFIHQGQ-KDLKELHW--HTQVPGMIV 455
L+ E+++A + D P +L+F H G + + + +W H ++ I
Sbjct: 368 LNKIG-------------EELDAIDLSDGPSELIFSHGGHTQPVTDFNWNHHKKLKMFIG 414
Query: 456 STAADGFNILMPSNIQSTL 474
ST+ D N L ++S L
Sbjct: 415 STSED--NTLQFWQLKSEL 431
>UNIPROTKB|Q8I238 [details] [associations]
symbol:PFA_0520c "Chromatin assembly factor 1 protein WD40
domain, putative" species:36329 "Plasmodium falciparum 3D7"
[GO:0006334 "nucleosome assembly" evidence=ISS] [GO:0042393
"histone binding" evidence=ISS] [GO:0051082 "unfolded protein
binding" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0051082
GO:GO:0042393 GO:GO:0006334 GO:GO:0005678 KO:K10752
InterPro:IPR022052 Pfam:PF12265 EMBL:AL844501 OMA:VLYDLVI
RefSeq:XP_001351036.1 ProteinModelPortal:Q8I238 PRIDE:Q8I238
EnsemblProtists:PFA0520c:mRNA GeneID:813241 KEGG:pfa:PFA_0520c
HOGENOM:HOG000283790 ProtClustDB:CLSZ2433094 Uniprot:Q8I238
Length = 446
Score = 181 (68.8 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 80/319 (25%), Positives = 147/319 (46%)
Query: 165 KVAHQGCVNRIRAMSQNPHICASWADTGHVQVWDFRSHLNALAES--ETVAGHGAPQVLN 222
K+AH G VNRI+ + P ++ T V D HL + + ETV
Sbjct: 148 KIAHTGEVNRIKFV---PLEKKNFVVTKAV---DGNVHLFDINKHKIETVDD-------K 194
Query: 223 QSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAAS 282
+P V F G++ +G+ +D+ P+ L + + I++++ + T V P + + +
Sbjct: 195 MNPEVSFVGNQSDGFGLDFQPIKKYILTCAN-DGLINVYDYNTLNTKTVQPFYKVQYKSP 253
Query: 283 VEDLQWSPT-ESDVFASCSVDGNIAIWDTRV-GKSALMSFKAHNADVNVISWNRLASCLL 340
V D+ SPT + ++ +C+ +G I I+D R+ VN ++ N L
Sbjct: 254 VNDI--SPTNDPNLILACADNGYILIFDFRIKSNEPAQQTLGQQVPVNTVALNTFTG-LF 310
Query: 341 ASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWD 400
ASGSD+G + DL+ ++ HK + + +SP++ S LA +S + + ++D
Sbjct: 311 ASGSDNGKIKVWDLKKFHEPQHII---NAHKEAIIRLNFSPNDASILASASNNRFINVYD 367
Query: 401 LSLXXXXXXXXXXXXXTREQVNAPE--DLPPQLLFIHQGQ-KDLKELHW--HTQVPGMIV 455
L+ E+++A + D P +L+F H G + + + +W H ++ I
Sbjct: 368 LNKIG-------------EELDAIDLSDGPSELIFSHGGHTQPVTDFNWNHHKKLKMFIG 414
Query: 456 STAADGFNILMPSNIQSTL 474
ST+ D N L ++S L
Sbjct: 415 STSED--NTLQFWQLKSEL 431
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 183 (69.5 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 52/176 (29%), Positives = 83/176 (47%)
Query: 226 LVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVED 285
++ GH I +N + R+V+G + + LW+ + +GH AS+
Sbjct: 56 IMSLTGHTSAVGCIQFNS-SEERVVAGSLSGSLRLWDLEAAKILRT----LMGHKASISS 110
Query: 286 LQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSD 345
L + P + AS SVD NI +WD R K + +K H V ++++ L AS SD
Sbjct: 111 LDFHPM-GEYLASGSVDSNIKLWDVR-RKGCVFRYKGHTQAVRCLAFSPDGKWL-ASASD 167
Query: 346 DGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDL 401
D T + DL + G ++ F H V +++ P+E LA SAD + +WDL
Sbjct: 168 DSTVKLWDL--IAG--KMITEFTSHTSAVNVVQFHPNE-YLLASGSADRTVKLWDL 218
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 177 (67.4 bits), Expect = 7.8e-11, P = 7.8e-11
Identities = 52/180 (28%), Positives = 81/180 (45%)
Query: 223 QSPLVKFGGHKDEGYAIDWNPVAPGRLV-SGDCNSCIHLWEPASDATWNVDPNPFIGHAA 281
++P++ GH Y + +NP G L+ SG + I LW D N GH
Sbjct: 43 EAPIMLLSGHPSAVYTMKFNPA--GTLIASGSHDREIFLWRVHGDCK-NF--MVLKGHKN 97
Query: 282 SVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLA 341
++ DL W+ S + S S D + WD GK + H++ VN R L+
Sbjct: 98 AILDLHWTSDGSQI-VSASPDKTVRAWDVETGKQ-IKKMAEHSSFVNSCCPTRRGPPLII 155
Query: 342 SGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDL 401
SGSDDGT + D+R +G + F K+ +T++ +S + DN + +WDL
Sbjct: 156 SGSDDGTAKLWDMRQ-RGA---IQTFP-DKYQITAVSFSD-AADKIFTGGVDNDVKVWDL 209
Score = 137 (53.3 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 39/159 (24%), Positives = 70/159 (44%)
Query: 246 PGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNI 305
P ++SG + LW+ P+ + + + +S +F VD ++
Sbjct: 151 PPLIISGSDDGTAKLWDMRQRGAIQTFPDKY-----QITAVSFSDAADKIFTG-GVDNDV 204
Query: 306 AIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVA 365
+WD R G+ A M+ + H + +S + S LL +G D+ + D+R + V
Sbjct: 205 KVWDLRKGE-ATMTLEGHQDTITGMSLSPDGSYLLTNGMDN-KLCVWDMRPYAPQNRCVK 262
Query: 366 HFEYHKHP----VTSIEWSPHEGSTLAVSSADNQLTIWD 400
FE H+H + WSP +G+ + S+D + IWD
Sbjct: 263 IFEGHQHNFEKNLLKCSWSP-DGTKVTAGSSDRMVHIWD 300
Score = 120 (47.3 bits), Expect = 0.00021, P = 0.00021
Identities = 41/171 (23%), Positives = 72/171 (42%)
Query: 231 GHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSP 290
GHK+ + W ++VS + + W D H++ V +
Sbjct: 94 GHKNAILDLHWTSDG-SQIVSASPDKTVRAW----DVETGKQIKKMAEHSSFVNSCCPTR 148
Query: 291 TESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFS 350
+ S S DG +WD R + A+ +F + +S++ A + G D+
Sbjct: 149 RGPPLIISGSDDGTAKLWDMRQ-RGAIQTFP-DKYQITAVSFSDAADKIFTGGVDNDV-K 205
Query: 351 IHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDL 401
+ DLR KG ++ E H+ +T + SP +GS L + DN+L +WD+
Sbjct: 206 VWDLR--KGEATMT--LEGHQDTITGMSLSP-DGSYLLTNGMDNKLCVWDM 251
>POMBASE|SPAC227.12 [details] [associations]
symbol:SPAC227.12 "U4/U6 x U5 tri-snRNP complex subunit
Prp4 family (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=ISS] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 PomBase:SPAC227.12
GO:GO:0005829 EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0046540 HSSP:P16649 GO:GO:0045292
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
OMA:CKIWDLR OrthoDB:EOG4V1B90 PIR:T50168 RefSeq:NP_592966.1
ProteinModelPortal:Q9UTC7 IntAct:Q9UTC7 STRING:Q9UTC7
EnsemblFungi:SPAC227.12.1 GeneID:2541477 KEGG:spo:SPAC227.12
NextBio:20802576 Uniprot:Q9UTC7
Length = 462
Score = 179 (68.1 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 59/191 (30%), Positives = 89/191 (46%)
Query: 222 NQSPLVKFGGHKDEGYAIDWNPVAPG--------RLVSGDCNSCIHLWEPASDATWNVDP 273
N S + F GH D +DW P+ L +G ++ + LW+ AS +T
Sbjct: 203 NLSEVQLFRGHTDRVSGLDWYPLCQAWDADSEQLTLATGAADNTVCLWK-ASQST----- 256
Query: 274 NPFI---GHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVI 330
P + GH A V + + P+ D S S D +WD G LM + H+ + I
Sbjct: 257 -PLLRLEGHLARVGRVAFHPS-GDYLVSASFDTTWRLWDVHTGVELLMQ-EGHSEGIFSI 313
Query: 331 SWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVS 390
+ S L++SG +D I DLR G S++ + H + ++ WSP+ G LA S
Sbjct: 314 ACQPDGS-LVSSGGNDAIGRIWDLR---SGKSIMV-LDEHIRQIVAMAWSPN-GYQLATS 367
Query: 391 SADNQLTIWDL 401
SAD+ + IWDL
Sbjct: 368 SADDTVKIWDL 378
>TAIR|locus:2057381 [details] [associations]
symbol:emb1345 "AT2G26060" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0000394 "RNA splicing,
via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0009086 "methionine biosynthetic process" evidence=RCA]
[GO:0010048 "vernalization response" evidence=RCA] [GO:0048573
"photoperiodism, flowering" evidence=RCA] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AC004747 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:AY093154
EMBL:AY085277 EMBL:BT003394 IPI:IPI00536484 PIR:T02617
RefSeq:NP_565615.1 UniGene:At.38940 ProteinModelPortal:O80990
SMR:O80990 PaxDb:O80990 PRIDE:O80990 EnsemblPlants:AT2G26060.1
GeneID:817147 KEGG:ath:AT2G26060 TAIR:At2g26060 InParanoid:O80990
PhylomeDB:O80990 ProtClustDB:CLSN2917143 ArrayExpress:O80990
Genevestigator:O80990 Uniprot:O80990
Length = 352
Score = 174 (66.3 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 49/181 (27%), Positives = 76/181 (41%)
Query: 228 KFGGHKDEGYAIDWNPV---APGR---LVSGDCNSCIHLWEPAS-DATWNVDPNPFIGHA 280
K GH D +++ WNPV A G L S ++ + +WE +S +W H
Sbjct: 15 KLEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEETHT 74
Query: 281 ASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGK-SALMSFKAHNADVNVISWNRLASCL 339
+V WSP+ + A+ S DG IW + + + + H +V +SWN SCL
Sbjct: 75 RTVRSCAWSPS-GQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASGSCL 133
Query: 340 LASGSDDGTFSIHDLRLLKGGD-SVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTI 398
D S+ +L+G + A H V ++W P L S DN + +
Sbjct: 134 ATCSRDK---SVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTM-DVLFSCSYDNTIKV 189
Query: 399 W 399
W
Sbjct: 190 W 190
Score = 130 (50.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 44/145 (30%), Positives = 67/145 (46%)
Query: 262 EPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNIAIWD-TRVGKS---AL 317
E +D W+V NP HA V SP + ASCS D + IW+ + + +S
Sbjct: 17 EGHTDRVWSVAWNPVSSHADGV-----SP----ILASCSGDNTVRIWEQSSLSRSWTCKT 67
Query: 318 MSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGD-SVVAHFEYHKHPVTS 376
+ + H V +W+ LLA+ S DGT I G + ++ E H++ V S
Sbjct: 68 VLEETHTRTVRSCAWSPSGQ-LLATASFDGTTGIWKNY---GSEFECISTLEGHENEVKS 123
Query: 377 IEWSPHEGSTLAVSSADNQLTIWDL 401
+ W+ GS LA S D + IW++
Sbjct: 124 VSWNA-SGSCLATCSRDKSVWIWEV 147
>UNIPROTKB|Q5RBZ2 [details] [associations]
symbol:WDR77 "Methylosome protein 50" species:9601 "Pongo
abelii" [GO:0005737 "cytoplasm" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 CTD:79084 HOGENOM:HOG000035094
HOVERGEN:HBG052458 KO:K13221 EMBL:CR858490 RefSeq:NP_001125399.1
UniGene:Pab.1454 ProteinModelPortal:Q5RBZ2 GeneID:100172304
KEGG:pon:100172304 InParanoid:Q5RBZ2 Uniprot:Q5RBZ2
Length = 342
Score = 173 (66.0 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 56/185 (30%), Positives = 85/185 (45%)
Query: 222 NQSPLV-KFGGHKDEGYAIDWNPVAPG-RLVSGDCNSCIHLWEPASDATWNVDPNPFIGH 279
N++ +V KF ++ + + ++ G + VSG + CI +W+ A N + H
Sbjct: 111 NETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLN----SYRAH 166
Query: 280 AASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSAL-MSFKAHNADVNVISWNRLASC 338
AA V + SP + VF SCS D I +WDTR K A + A ++W+ S
Sbjct: 167 AAQVTCVAASPHKDSVFLSCSEDNRILLWDTRRPKPASQIGCSAPGYLPTSLAWHPQQSE 226
Query: 339 LLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTI 398
+ G ++GT S+ D + S V H VT + +SPH LA S D L +
Sbjct: 227 VFVFGDENGTVSLVDTK----STSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAV 282
Query: 399 WDLSL 403
D SL
Sbjct: 283 LDSSL 287
>DICTYBASE|DDB_G0270992 [details] [associations]
symbol:sec31 "putative transport protein"
species:44689 "Dictyostelium discoideum" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0030127 "COPII
vesicle coat" evidence=ISS] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISS] [GO:0006886
"intracellular protein transport" evidence=ISS] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0012507 "ER to Golgi transport vesicle membrane"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR004098
InterPro:IPR015943 Pfam:PF00400 Pfam:PF02840 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0270992 GO:GO:0006886
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005789 GO:GO:0005681 GO:GO:0006888
GO:GO:0030127 eggNOG:NOG248389 KO:K14005 RefSeq:XP_646396.1
ProteinModelPortal:Q55CT5 STRING:Q55CT5 PRIDE:Q55CT5
EnsemblProtists:DDB0235185 GeneID:8617351 KEGG:ddi:DDB_G0270992
OMA:MMNQPPM Uniprot:Q55CT5
Length = 1355
Score = 182 (69.1 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 58/222 (26%), Positives = 95/222 (42%)
Query: 184 ICASWADTGHVQVWDFRSHLNALAESETVAGHGAPQVLNQSPLVKFGG-HKDEGYAIDWN 242
I A D G + +WD LA S+ G G+ +QS L+ G H +ID+N
Sbjct: 86 IIAGAMDNGTINLWD---PTKILA-SDATDGGGSD---DQSSLIGVGQRHSGPVQSIDFN 138
Query: 243 PVAPGRLVSGDCNSCIHLWEPASDATWN--VDPNPFIGHAASVEDLQWSPTESDVFASCS 300
P L SG +S + +W+ SD T ++P ++ + + W+ + + S S
Sbjct: 139 VQNPNLLASGGSDSEVFIWD-LSDPTQPSALNPGSKSQQSSDITCVAWNKKVAHILGSAS 197
Query: 301 VDGNIAIWDTRVGKSALMSFKAHNADVNV--ISWNRLASCLLASGSDDGTFSIHDLRLLK 358
+G I IWD + K LM+ N I W+ + + + S+D + L+
Sbjct: 198 YNGYIVIWDLK-SKKTLMTINDRNRKCKYRSIVWHPSEATQIVAASEDDDHPVIQAWDLR 256
Query: 359 GGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWD 400
S V E HK V + W P + + L + DN+ W+
Sbjct: 257 NTTSPVKSMEGHKKGVWGLSWCPSDNALLLSTGKDNKTFCWN 298
>MGI|MGI:1917715 [details] [associations]
symbol:Wdr77 "WD repeat domain 77" species:10090 "Mus
musculus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0008284
"positive regulation of cell proliferation" evidence=IGI]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IGI] [GO:0030374 "ligand-dependent nuclear receptor
transcription coactivator activity" evidence=ISO] [GO:0060528
"secretory columnal luminar epithelial cell differentiation
involved in prostate glandular acinus development" evidence=IMP]
[GO:0060770 "negative regulation of epithelial cell proliferation
involved in prostate gland development" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1917715 GO:GO:0005634 GO:GO:0005794 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319 GO:GO:0006357
GO:GO:0060770 GO:GO:0030374 GO:GO:0060528 CTD:79084
HOGENOM:HOG000035094 HOVERGEN:HBG052458 KO:K13221 OrthoDB:EOG4MPHQT
OMA:MRKETPP EMBL:AK012014 EMBL:AK032897 EMBL:AK048488 EMBL:AK050391
EMBL:AK163839 EMBL:AK169128 EMBL:BC005755 IPI:IPI00114819
RefSeq:NP_081708.1 UniGene:Mm.5110 ProteinModelPortal:Q99J09
SMR:Q99J09 IntAct:Q99J09 STRING:Q99J09 PhosphoSite:Q99J09
PaxDb:Q99J09 PRIDE:Q99J09 Ensembl:ENSMUST00000010278 GeneID:70465
KEGG:mmu:70465 UCSC:uc008qvo.1 GeneTree:ENSGT00390000010711
InParanoid:Q99J09 ChiTaRS:WDR77 NextBio:331685 Bgee:Q99J09
CleanEx:MM_WDR77 Genevestigator:Q99J09
GermOnline:ENSMUSG00000000561 Uniprot:Q99J09
Length = 342
Score = 171 (65.3 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 54/185 (29%), Positives = 83/185 (44%)
Query: 222 NQSPLV-KFGGHKDEGYAIDWNPVAPG-RLVSGDCNSCIHLWEPASDATWNVDPNPFIGH 279
N++ +V KF ++ + ++ G + VSG + CI +W+ A V N + H
Sbjct: 111 NETLIVSKFCKYEHDDIVSTVTVLSSGTQAVSGSKDCCIKIWDLAQQ----VSLNSYRAH 166
Query: 280 AASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSAL-MSFKAHNADVNVISWNRLASC 338
A V + SP + VF SCS D I +WDTR K A M+ A ++W+ S
Sbjct: 167 AGQVTCVAASPHKDSVFLSCSEDSRILLWDTRCPKPASQMACNASGYLPTALAWHPQQSE 226
Query: 339 LLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTI 398
+ G ++G+ S+ D + S H VT + +SPH L S D L +
Sbjct: 227 VFVFGDENGSVSLVDTK----NASCTLSSAVHSQGVTRLVFSPHSVPLLTSLSEDCSLAV 282
Query: 399 WDLSL 403
D SL
Sbjct: 283 LDSSL 287
>TAIR|locus:2139489 [details] [associations]
symbol:AGB1 "AT4G34460" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=ISS;IDA;IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0009887 "organ morphogenesis"
evidence=IMP] [GO:0010154 "fruit development" evidence=IMP]
[GO:0072593 "reactive oxygen species metabolic process"
evidence=IMP] [GO:0050832 "defense response to fungus"
evidence=RCA;IMP] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA;IMP] [GO:0009788 "negative regulation of
abscisic acid mediated signaling pathway" evidence=IMP] [GO:0009845
"seed germination" evidence=IEP;IMP] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0009723 "response to ethylene stimulus"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0009817 "defense response to fungus, incompatible interaction"
evidence=IMP] [GO:0048527 "lateral root development"
evidence=RCA;IMP] [GO:0009991 "response to extracellular stimulus"
evidence=IMP] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0006612 "protein targeting to membrane" evidence=RCA]
[GO:0007154 "cell communication" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009617 "response to
bacterium" evidence=RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=RCA] [GO:0009738 "abscisic acid mediated
signaling pathway" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=RCA] [GO:0010200 "response to chitin"
evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0031348
"negative regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0048193 "Golgi vesicle transport" evidence=RCA] [GO:0051707
"response to other organism" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005783
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009738 GO:GO:0009723
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0048527 GO:GO:0009817
GO:GO:0009845 GO:GO:0009887 GO:GO:0009788 GO:GO:0004871
GO:GO:0009991 GO:GO:0072593 GO:GO:0010154 EMBL:AL161585
GO:GO:0030968 EMBL:AL023094 GO:GO:0009867 PRINTS:PR00319
GO:GO:0080008 GO:GO:0005834 HOGENOM:HOG000176356 KO:K04536
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:GACDATS EMBL:U12232
IPI:IPI00545688 PIR:T05266 RefSeq:NP_195172.1 UniGene:At.22855
ProteinModelPortal:P49177 SMR:P49177 DIP:DIP-40108N IntAct:P49177
STRING:P49177 PaxDb:P49177 PRIDE:P49177 EnsemblPlants:AT4G34460.1
GeneID:829597 KEGG:ath:AT4G34460 GeneFarm:2858 TAIR:At4g34460
InParanoid:P49177 PhylomeDB:P49177 ProtClustDB:CLSN2685906
Genevestigator:P49177 Uniprot:P49177
Length = 377
Score = 172 (65.6 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 52/176 (29%), Positives = 77/176 (43%)
Query: 231 GHKDEGYAIDWNPVAPGRLV--SGDCNSCIHLWEPASDATWNVDPNPF-IGHAASVEDLQ 287
GH+ + P L+ SGD +CI LW+ + +V F GH A V +
Sbjct: 154 GHRGYVSCCQYVPNEDAHLITSSGD-QTCI-LWDVTTGLKTSVFGGEFQSGHTADVLSVS 211
Query: 288 WSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDG 347
S + + F S S D +WDTR A+ +F H DVN + + +GSDDG
Sbjct: 212 ISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFP-DGYRFGTGSDDG 270
Query: 348 TFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLSL 403
T ++D+R H + PVTSI +S A +++N +WD L
Sbjct: 271 TCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSVSGRLLFAGYASNNTCYVWDTLL 326
Score = 124 (48.7 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 47/180 (26%), Positives = 79/180 (43%)
Query: 229 FGGHKDEGYAIDWNPVA-----PGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASV 283
FGG G+ D V+ P +SG C+S LW+ + A+ V F GH V
Sbjct: 195 FGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRA-ASRAV--RTFHGHEGDV 251
Query: 284 EDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAH----NADVNVISWNRLASCL 339
+++ P + F + S DG ++D R G L ++ H N V I+++ L
Sbjct: 252 NTVKFFP-DGYRFGTGSDDGTCRLYDIRTGHQ-LQVYQPHGDGENGPVTSIAFSVSGRLL 309
Query: 340 LASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
A + + T + D L + + + H++ ++ + S +GS L S D+ L IW
Sbjct: 310 FAGYASNNTCYVWDTLLGEVVLDLGLQQDSHRNRISCLGLSA-DGSALCTGSWDSNLKIW 368
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 174 (66.3 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 59/191 (30%), Positives = 88/191 (46%)
Query: 247 GRLVS--GDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFASCSVDGN 304
GRL++ GD + + LW+ +S N+ + G +A+ D S T AS D
Sbjct: 156 GRLIASCGD-DRTVRLWDTSSHQCINIFTD--YGGSATFVDFNSSGT---CIASSGADNT 209
Query: 305 IAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVV 364
I IWD R K + +K HNA VN S++ + L+ SGS D T I DL L+G ++
Sbjct: 210 IKIWDIRTNK-LIQHYKVHNAGVNCFSFHPSGNYLI-SGSSDSTIKILDL--LEG--RLI 263
Query: 365 AHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLSLXXXXXXXXXXXXXTREQVNAP 424
HK PV ++ +S +G A AD+Q+ +W + R P
Sbjct: 264 YTLHGHKGPVLTVTFS-RDGDLFASGGADSQVLMWKTNFDSLNYRELLSKHSKRV---TP 319
Query: 425 EDLPPQLLFIH 435
D PP L+ I+
Sbjct: 320 -DPPPHLMDIY 329
Score = 149 (57.5 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 50/175 (28%), Positives = 82/175 (46%)
Query: 229 FGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQW 288
F GHKD D+NP +L +G C+ + +W A A F+GH + + +
Sbjct: 14 FKGHKDVISCADFNPNNK-QLATGSCDKSLMIWNLAPKAR----AFRFVGHTDVITGVNF 68
Query: 289 SPTESDVFASCSVDGNIAIWDTRV-GKSALMSFKAHNADVNVISWNRLASCLLASGSDDG 347
+P+ S V AS S D + +W + G+S + FKAH A V + ++R L+ + SDD
Sbjct: 69 APSGSLV-ASSSRDQTVRLWTPSIKGESTV--FKAHTASVRSVHFSRDGQRLVTA-SDDK 124
Query: 348 TFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLS 402
+ + + K S+ H + V +SP +G +A D + +WD S
Sbjct: 125 SVKVWGVERKKFLYSLNRHTNW----VRCARFSP-DGRLIASCGDDRTVRLWDTS 174
>UNIPROTKB|Q9BQA1 [details] [associations]
symbol:WDR77 "Methylosome protein 50" species:9606 "Homo
sapiens" [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0060528
"secretory columnal luminar epithelial cell differentiation
involved in prostate glandular acinus development" evidence=IEA]
[GO:0060770 "negative regulation of epithelial cell proliferation
involved in prostate gland development" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IGI;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IGI;IDA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IGI] [GO:0000387 "spliceosomal snRNP assembly"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0034660 "ncRNA metabolic process" evidence=TAS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] Reactome:REACT_71 Reactome:REACT_21257
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005634 GO:GO:0005794 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CH471122
GO:GO:0008284 eggNOG:COG2319 EMBL:AL390195 GO:GO:0006357
GO:GO:0000387 PDB:4GQB PDBsum:4GQB
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0034660
GO:GO:0060770 GO:GO:0030374 GO:GO:0060528 CTD:79084
HOVERGEN:HBG052458 KO:K13221 OrthoDB:EOG4MPHQT EMBL:AF478464
EMBL:AK022860 EMBL:AK223189 EMBL:AY225316 EMBL:AB073603
EMBL:BC001679 EMBL:BC006477 EMBL:BC009411 EMBL:BC011778
EMBL:BC016946 EMBL:AB074171 IPI:IPI00012202 RefSeq:NP_077007.1
UniGene:Hs.204773 ProteinModelPortal:Q9BQA1 SMR:Q9BQA1
DIP:DIP-38172N IntAct:Q9BQA1 MINT:MINT-1217135 STRING:Q9BQA1
PhosphoSite:Q9BQA1 DMDM:32171507 REPRODUCTION-2DPAGE:IPI00012202
PaxDb:Q9BQA1 PeptideAtlas:Q9BQA1 PRIDE:Q9BQA1 DNASU:79084
Ensembl:ENST00000235090 GeneID:79084 KEGG:hsa:79084 UCSC:uc001ebb.3
GeneCards:GC01M111983 HGNC:HGNC:29652 HPA:HPA026437 HPA:HPA026448
HPA:HPA027271 MIM:611734 neXtProt:NX_Q9BQA1 PharmGKB:PA142670581
InParanoid:Q9BQA1 OMA:MRKETPP PhylomeDB:Q9BQA1 GenomeRNAi:79084
NextBio:67897 ArrayExpress:Q9BQA1 Bgee:Q9BQA1 CleanEx:HS_WDR77
Genevestigator:Q9BQA1 GermOnline:ENSG00000116455 Uniprot:Q9BQA1
Length = 342
Score = 170 (64.9 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 55/185 (29%), Positives = 85/185 (45%)
Query: 222 NQSPLV-KFGGHKDEGYAIDWNPVAPG-RLVSGDCNSCIHLWEPASDATWNVDPNPFIGH 279
N++ +V KF ++ + + ++ G + VSG + CI +W+ A + + H
Sbjct: 111 NETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLS----SYRAH 166
Query: 280 AASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSAL-MSFKAHNADVNVISWNRLASC 338
AA V + SP + VF SCS D I +WDTR K A + A ++W+ S
Sbjct: 167 AAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSE 226
Query: 339 LLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTI 398
+ G ++GT S+ D + S V H VT + +SPH LA S D L +
Sbjct: 227 VFVFGDENGTVSLVDTK----STSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAV 282
Query: 399 WDLSL 403
D SL
Sbjct: 283 LDSSL 287
>UNIPROTKB|F1S8D4 [details] [associations]
symbol:WDR77 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060770 "negative regulation of epithelial cell
proliferation involved in prostate gland development" evidence=IEA]
[GO:0060528 "secretory columnal luminar epithelial cell
differentiation involved in prostate glandular acinus development"
evidence=IEA] [GO:0030374 "ligand-dependent nuclear receptor
transcription coactivator activity" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005794
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 GO:GO:0006357 GO:GO:0060770
GO:GO:0030374 GO:GO:0060528 KO:K13221 OMA:MRKETPP
GeneTree:ENSGT00390000010711 EMBL:FP340442 RefSeq:XP_003355293.1
UniGene:Ssc.2373 Ensembl:ENSSSCT00000007438 GeneID:100156038
KEGG:ssc:100156038 Uniprot:F1S8D4
Length = 342
Score = 170 (64.9 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 52/185 (28%), Positives = 84/185 (45%)
Query: 222 NQSPLV-KFGGHKDEGYAIDWNPVAPG-RLVSGDCNSCIHLWEPASDATWNVDPNPFIGH 279
N++ +V KF ++ + + ++ G + VSG + CI +W+ A N + H
Sbjct: 111 NETLIVSKFCKYEHDDIVSSVSVLSSGTQAVSGSKDFCIKVWDLAQQMVLN----SYRAH 166
Query: 280 AASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSAL-MSFKAHNADVNVISWNRLASC 338
+ V + SP + VF SCS D I +WDTR K A + ++A ++W+ S
Sbjct: 167 SGQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGYRASGYLPTSLAWHPQRSE 226
Query: 339 LLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTI 398
+ G ++GT S+ D + S H VT + +SPH LA S D L +
Sbjct: 227 VFVFGDENGTVSLVDTK----SASCALSATVHSQSVTGLVFSPHSTPFLASVSEDCSLAV 282
Query: 399 WDLSL 403
D L
Sbjct: 283 LDSGL 287
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 170 (64.9 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 49/187 (26%), Positives = 88/187 (47%)
Query: 216 GAPQVLN-QSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPN 274
G P+ + Q+P++ GH+ E Y ++P L S + I LW D +
Sbjct: 49 GPPRCSSLQAPIMLLSGHEGEVYCCKFHPNG-STLASAGFDRLILLWNVYGDCD---NYA 104
Query: 275 PFIGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNR 334
GH+ +V +L ++ T+ + S S D +A+WD+ G+ + K H + VN R
Sbjct: 105 TLKGHSGAVMELHYN-TDGSMLFSASTDKTVAVWDSETGER-VKRLKGHTSFVNSCYPAR 162
Query: 335 LASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADN 394
L+ +GSDDGT + D+R + V F+ + + V ++ ++ ++ DN
Sbjct: 163 RGPQLVCTGSDDGTVKLWDIRK----KAAVQTFQ-NTYQVLAVTFNDTSDQIIS-GGIDN 216
Query: 395 QLTIWDL 401
+ +WDL
Sbjct: 217 DIKVWDL 223
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 41/159 (25%), Positives = 68/159 (42%)
Query: 246 PGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNI 305
P + +G + + LW+ A N + A + D SD S +D +I
Sbjct: 165 PQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFNDT------SDQIISGGIDNDI 218
Query: 306 AIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVA 365
+WD R K + + H V +S + S LL++ D+ T + D+R + V
Sbjct: 219 KVWDLRQNKLTY-TMRGHADSVTGLSLSSEGSYLLSNAMDN-TVRVWDVRPFAPKERCVK 276
Query: 366 HFEYHKHP----VTSIEWSPHEGSTLAVSSADNQLTIWD 400
F+ + H + WSP +GS +A SAD + +WD
Sbjct: 277 IFQGNVHNFEKNLLRCSWSP-DGSKIAAGSADRFVYVWD 314
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 170 (64.9 bits), Expect = 6.7e-10, P = 6.7e-10
Identities = 49/187 (26%), Positives = 88/187 (47%)
Query: 216 GAPQVLN-QSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPN 274
G P+ + Q+P++ GH+ E Y ++P L S + I LW D +
Sbjct: 75 GPPRCSSLQAPIMLLSGHEGEVYCCKFHPWG-NTLASAGFDRLILLWNVYGDCD---NYA 130
Query: 275 PFIGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNR 334
GH+ +V +L ++ T+ + S S D +A+WD+ G+ + K H + VN R
Sbjct: 131 TLKGHSGAVMELHYN-TDGSMLFSASTDKTVAVWDSETGER-VKRLKGHTSFVNSCYPAR 188
Query: 335 LASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADN 394
L+ +GSDDGT + D+R + V F+ + + V ++ ++ ++ DN
Sbjct: 189 RGPQLVCTGSDDGTVKLWDIRK----KAAVQTFQ-NTYQVLAVTFNDTSDQIIS-GGIDN 242
Query: 395 QLTIWDL 401
+ +WDL
Sbjct: 243 DIKVWDL 249
Score = 120 (47.3 bits), Expect = 0.00026, P = 0.00026
Identities = 42/159 (26%), Positives = 68/159 (42%)
Query: 246 PGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNI 305
P + +G + + LW+ A N + A + D SD S +D +I
Sbjct: 191 PQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFNDT------SDQIISGGIDNDI 244
Query: 306 AIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVA 365
+WD R K + + H V +S + S LL++ D+ T I D+R + V
Sbjct: 245 KVWDLRQNKLTY-TMRGHADSVTGLSLSSEGSYLLSNAMDN-TVRIWDVRPFAPKERCVK 302
Query: 366 HFEYHKHP----VTSIEWSPHEGSTLAVSSADNQLTIWD 400
F+ + H + WSP +GS +A SAD + +WD
Sbjct: 303 IFQGNVHNFEKNLLRCSWSP-DGSKIAGGSADRFVYVWD 340
>DICTYBASE|DDB_G0287635 [details] [associations]
symbol:prpf4 "pre-mRNA processing factor 4"
species:44689 "Dictyostelium discoideum" [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287635
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR EMBL:AAFI02000103 GO:GO:0000398
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0046540
InterPro:IPR014906 Pfam:PF08799 KO:K12662 OMA:CIATVSH
RefSeq:XP_637144.1 ProteinModelPortal:Q54K20 STRING:Q54K20
EnsemblProtists:DDB0233058 GeneID:8626239 KEGG:ddi:DDB_G0287635
InParanoid:Q54K20 ProtClustDB:CLSZ2497485 Uniprot:Q54K20
Length = 600
Score = 174 (66.3 bits), Expect = 6.8e-10, Sum P(2) = 6.8e-10
Identities = 50/143 (34%), Positives = 73/143 (51%)
Query: 262 EPASDATWNVDPNPFI---GHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALM 318
E +DAT +++ P + GH+ V + P + S S D + +WD G L+
Sbjct: 366 EEDNDATVSIETQPILSLEGHSDVVNRCSFHPCGRYITTS-SNDKSWRLWDLESGGKCLL 424
Query: 319 SFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIE 378
+ H+ V IS S LLA+GS DG I DLR G ++ +F+ H V S++
Sbjct: 425 DQEGHSDGVMGISIQSDGS-LLATGSQDGLVRIWDLR---SGRPIL-YFQGHSKQVISVD 479
Query: 379 WSPHEGSTLAVSSADNQLTIWDL 401
WSP+ G LA SS DN + IWD+
Sbjct: 480 WSPN-GYQLASSSEDNTVVIWDI 501
Score = 131 (51.2 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 40/147 (27%), Positives = 66/147 (44%)
Query: 221 LNQSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNS-CIHLWEPASDATWNVDPNPFIGH 279
+ P++ GH D ++P GR ++ N LW+ S +D GH
Sbjct: 375 IETQPILSLEGHSDVVNRCSFHPC--GRYITTSSNDKSWRLWDLESGGKCLLDQE---GH 429
Query: 280 AASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCL 339
+ V + ++ + A+ S DG + IWD R G+ L F+ H+ V + W+
Sbjct: 430 SDGVMGISIQ-SDGSLLATGSQDGLVRIWDLRSGRPILY-FQGHSKQVISVDWSP-NGYQ 486
Query: 340 LASGSDDGTFSIHDLRLLKGGDSVVAH 366
LAS S+D T I D+R + ++AH
Sbjct: 487 LASSSEDNTVVIWDIRKKEQSCQILAH 513
Score = 43 (20.2 bits), Expect = 6.8e-10, Sum P(2) = 6.8e-10
Identities = 8/21 (38%), Positives = 17/21 (80%)
Query: 106 SWNSIGVFKVSNISGKRRELV 126
SW+ GV KV ++SG++++++
Sbjct: 288 SWS--GVSKVWSVSGQKKQIL 306
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 169 (64.5 bits), Expect = 7.1e-10, P = 7.1e-10
Identities = 48/187 (25%), Positives = 88/187 (47%)
Query: 216 GAPQVLN-QSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPN 274
G P+ + Q+P++ GH+ E Y ++P L S + I LW D +
Sbjct: 48 GPPRCSSLQAPIMLLSGHEGEVYCCKFHPNG-STLASAGFDRLILLWNVYGDCD---NYA 103
Query: 275 PFIGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNR 334
GH+ +V +L ++ T+ + S S D +A+WD+ G+ + K H + VN R
Sbjct: 104 TLKGHSGAVMELHYN-TDGSMLFSASTDKTVAVWDSETGER-VKRLKGHTSFVNSCYPAR 161
Query: 335 LASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADN 394
L+ +GSDDGT + D+R + + F+ + + V ++ ++ ++ DN
Sbjct: 162 RGPQLVCTGSDDGTVKLWDIRK----KAAIQTFQ-NTYQVLAVTFNDTSDQIIS-GGIDN 215
Query: 395 QLTIWDL 401
+ +WDL
Sbjct: 216 DIKVWDL 222
Score = 122 (48.0 bits), Expect = 0.00013, P = 0.00013
Identities = 41/159 (25%), Positives = 68/159 (42%)
Query: 246 PGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNI 305
P + +G + + LW+ A N + A + D SD S +D +I
Sbjct: 164 PQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDT------SDQIISGGIDNDI 217
Query: 306 AIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVA 365
+WD R K + + H V +S + S LL++ D+ T + D+R + V
Sbjct: 218 KVWDLRQNKLTY-TMRGHADSVTGLSLSSEGSYLLSNAMDN-TVRVWDVRPFAPKERCVK 275
Query: 366 HFEYHKHP----VTSIEWSPHEGSTLAVSSADNQLTIWD 400
F+ + H + WSP +GS +A SAD + +WD
Sbjct: 276 IFQGNVHNFEKNLLRCSWSP-DGSKIAAGSADRFVYVWD 313
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 169 (64.5 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 48/187 (25%), Positives = 88/187 (47%)
Query: 216 GAPQVLN-QSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPN 274
G P+ + Q+P++ GH+ E Y ++P L S + I LW D +
Sbjct: 49 GPPRCSSLQAPIMLLSGHEGEVYCCKFHPNG-STLASAGFDRLILLWNVYGDCD---NYA 104
Query: 275 PFIGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNR 334
GH+ +V +L ++ T+ + S S D +A+WD+ G+ + K H + VN R
Sbjct: 105 TLKGHSGAVMELHYN-TDGSMLFSASTDKTVAVWDSETGER-VKRLKGHTSFVNSCYPAR 162
Query: 335 LASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADN 394
L+ +GSDDGT + D+R + + F+ + + V ++ ++ ++ DN
Sbjct: 163 RGPQLVCTGSDDGTVKLWDIRK----KAAIQTFQ-NTYQVLAVTFNDTSDQIIS-GGIDN 216
Query: 395 QLTIWDL 401
+ +WDL
Sbjct: 217 DIKVWDL 223
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 41/159 (25%), Positives = 68/159 (42%)
Query: 246 PGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNI 305
P + +G + + LW+ A N + A + D SD S +D +I
Sbjct: 165 PQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDT------SDQIISGGIDNDI 218
Query: 306 AIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVA 365
+WD R K + + H V +S + S LL++ D+ T + D+R + V
Sbjct: 219 KVWDLRQNKLTY-TMRGHADSVTGLSLSSEGSYLLSNAMDN-TVRVWDVRPFAPKERCVK 276
Query: 366 HFEYHKHP----VTSIEWSPHEGSTLAVSSADNQLTIWD 400
F+ + H + WSP +GS +A SAD + +WD
Sbjct: 277 IFQGNVHNFEKNLLRCSWSP-DGSKIAAGSADRFVYVWD 314
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 169 (64.5 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 48/187 (25%), Positives = 88/187 (47%)
Query: 216 GAPQVLN-QSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPN 274
G P+ + Q+P++ GH+ E Y ++P L S + I LW D +
Sbjct: 49 GPPRCSSLQAPIMLLSGHEGEVYCCKFHPNG-STLASAGFDRLILLWNVYGDCD---NYA 104
Query: 275 PFIGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNR 334
GH+ +V +L ++ T+ + S S D +A+WD+ G+ + K H + VN R
Sbjct: 105 TLKGHSGAVMELHYN-TDGSMLFSASTDKTVAVWDSETGER-VKRLKGHTSFVNSCYPAR 162
Query: 335 LASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADN 394
L+ +GSDDGT + D+R + + F+ + + V ++ ++ ++ DN
Sbjct: 163 RGPQLVCTGSDDGTVKLWDIRK----KAAIQTFQ-NTYQVLAVTFNDTSDQIIS-GGIDN 216
Query: 395 QLTIWDL 401
+ +WDL
Sbjct: 217 DIKVWDL 223
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 41/159 (25%), Positives = 68/159 (42%)
Query: 246 PGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNI 305
P + +G + + LW+ A N + A + D SD S +D +I
Sbjct: 165 PQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDT------SDQIISGGIDNDI 218
Query: 306 AIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVA 365
+WD R K + + H V +S + S LL++ D+ T + D+R + V
Sbjct: 219 KVWDLRQNKLTY-TMRGHADSVTGLSLSSEGSYLLSNAMDN-TVRVWDVRPFAPKERCVR 276
Query: 366 HFEYHKHP----VTSIEWSPHEGSTLAVSSADNQLTIWD 400
F+ + H + WSP +GS +A SAD + +WD
Sbjct: 277 IFQGNVHNFEKNLLRCSWSP-DGSKIAAGSADRFVYVWD 314
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 169 (64.5 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 48/187 (25%), Positives = 88/187 (47%)
Query: 216 GAPQVLN-QSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPN 274
G P+ + Q+P++ GH+ E Y ++P L S + I LW D +
Sbjct: 49 GPPRCSSLQAPIMLLSGHEGEVYCCKFHPNG-STLASAGFDRLILLWNVYGDCD---NYA 104
Query: 275 PFIGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNR 334
GH+ +V +L ++ T+ + S S D +A+WD+ G+ + K H + VN R
Sbjct: 105 TLKGHSGAVMELHYN-TDGSMLFSASTDKTVAVWDSETGER-VKRLKGHTSFVNSCYPAR 162
Query: 335 LASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADN 394
L+ +GSDDGT + D+R + + F+ + + V ++ ++ ++ DN
Sbjct: 163 RGPQLVCTGSDDGTVKLWDIRK----KAAIQTFQ-NTYQVLAVTFNDTSDQIIS-GGIDN 216
Query: 395 QLTIWDL 401
+ +WDL
Sbjct: 217 DIKVWDL 223
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 41/159 (25%), Positives = 68/159 (42%)
Query: 246 PGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNI 305
P + +G + + LW+ A N + A + D SD S +D +I
Sbjct: 165 PQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDT------SDQIISGGIDNDI 218
Query: 306 AIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVA 365
+WD R K + + H V +S + S LL++ D+ T + D+R + V
Sbjct: 219 KVWDLRQNKLTY-TMRGHADSVTGLSLSSEGSYLLSNAMDN-TVRVWDVRPFAPKERCVK 276
Query: 366 HFEYHKHP----VTSIEWSPHEGSTLAVSSADNQLTIWD 400
F+ + H + WSP +GS +A SAD + +WD
Sbjct: 277 IFQGNVHNFEKNLLRCSWSP-DGSKIAAGSADRFVYVWD 314
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 169 (64.5 bits), Expect = 7.3e-10, P = 7.3e-10
Identities = 48/187 (25%), Positives = 88/187 (47%)
Query: 216 GAPQVLN-QSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPN 274
G P+ + Q+P++ GH+ E Y ++P L S + I LW D +
Sbjct: 49 GPPRCSSLQAPIMLLSGHEGEVYCCKFHPNG-STLASAGFDRLILLWSVYGDCD---NYA 104
Query: 275 PFIGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNR 334
GH+ +V +L ++ T+ + S S D +A+WD+ G+ + K H + VN R
Sbjct: 105 TLKGHSGAVMELHYN-TDGSMLFSASTDKTVAVWDSETGER-VKRLKGHTSFVNSCYPAR 162
Query: 335 LASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADN 394
L+ +GSDDGT + D+R + + F+ + + V ++ ++ ++ DN
Sbjct: 163 RGPQLVCTGSDDGTVKLWDIRK----KAAIQTFQ-NTYQVLAVTFNDTSDQIIS-GGIDN 216
Query: 395 QLTIWDL 401
+ +WDL
Sbjct: 217 DIKVWDL 223
>UNIPROTKB|O59894 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:4922 "Komagataella pastoris" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015031 EMBL:AF021797
ProteinModelPortal:O59894 Uniprot:O59894
Length = 376
Score = 138 (53.6 bits), Expect = 7.4e-10, Sum P(2) = 7.4e-10
Identities = 33/125 (26%), Positives = 60/125 (48%)
Query: 283 VEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVIS--WNRLASCLL 340
V D ++S + ++ SC+ D ++ +WDTR+ M F AHN + +S +NR ++
Sbjct: 187 VYDAKFSFHDPNIIMSCNSDSHLQLWDTRLPNPLFMDFVAHNG-LEALSCDFNRYRPFVV 245
Query: 341 ASGSDDGTFSIHDLRLLKGG-----DSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQ 395
AS D + D R+++ + F H+ + + WSPH + L S D
Sbjct: 246 ASAGVDKLAKVWDTRMIQPNVHSRPPRALNKFMGHEFAIRKLAWSPHGPTQLLTCSYDMT 305
Query: 396 LTIWD 400
+ +W+
Sbjct: 306 VRVWN 310
Score = 75 (31.5 bits), Expect = 7.4e-10, Sum P(2) = 7.4e-10
Identities = 12/46 (26%), Positives = 24/46 (52%)
Query: 221 LNQSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASD 266
L P++KF H+ E +++DW+ + S + + +W P S+
Sbjct: 92 LKDYPVMKFTEHQREVFSVDWSNIDKNLFCSASWDGSVKVWSPGSN 137
>UNIPROTKB|Q7PS24 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7165 "Anopheles gambiae"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:AAAB01008846 RefSeq:XP_310648.3 HSSP:P63005
ProteinModelPortal:Q7PS24 STRING:Q7PS24
EnsemblMetazoa:AGAP000444-RA GeneID:1271794
KEGG:aga:AgaP_AGAP000444 VectorBase:AGAP000444 CTD:1271794
PhylomeDB:Q7PS24 Uniprot:Q7PS24
Length = 341
Score = 152 (58.6 bits), Expect = 8.5e-10, Sum P(2) = 8.5e-10
Identities = 46/175 (26%), Positives = 78/175 (44%)
Query: 231 GHKDEGYAIDWNPVAPGRLVSGDC--NSCIHLWEPASDATWNVDPNPFIGHAASVEDLQW 288
GH ++ W+P G+L + C + I +W + W GH ++ +L W
Sbjct: 12 GHAGRVWSAAWHP--GGKLFAS-CGEDKTIRVWNKSDTDRWVAQTVLTDGHTRTIRELAW 68
Query: 289 SPTESDVFASCSVDGNIAIWDTRVGK-SALMSFKAHNADVNVISWNRLASCLLASGSDDG 347
S AS S D +A+WD + G+ + + H+ +V ++W+R + LLA+ S D
Sbjct: 69 SCC-GHYLASASFDTTVAVWDKKSGEFECNATLEGHDNEVKSVTWSRSGN-LLATCSRDK 126
Query: 348 T---FSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
+ + IH + VA H V + W P E LA +S DN + ++
Sbjct: 127 SVWIWEIHHAPDQEDEYECVAVLNGHTQDVKKVCWHPQE-DLLASASYDNTIRMY 180
Score = 137 (53.3 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 39/127 (30%), Positives = 56/127 (44%)
Query: 278 GHAASVEDLQWSPTESDVFASCSVDGNIAIW---DTRVGKSALMSFKAHNADVNVISWNR 334
GHA V W P +FASC D I +W DT + + H + ++W+
Sbjct: 12 GHAGRVWSAAWHPG-GKLFASCGEDKTIRVWNKSDTDRWVAQTVLTDGHTRTIRELAWS- 69
Query: 335 LASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADN 394
LAS S D T ++ D + G A E H + V S+ WS G+ LA S D
Sbjct: 70 CCGHYLASASFDTTVAVWDKK--SGEFECNATLEGHDNEVKSVTWS-RSGNLLATCSRDK 126
Query: 395 QLTIWDL 401
+ IW++
Sbjct: 127 SVWIWEI 133
Score = 113 (44.8 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 40/158 (25%), Positives = 65/158 (41%)
Query: 249 LVSGDCNSCIHLWEPASDATWNVDPNPFI-GHAASVEDLQWSPTESDVFASCSVDGNIAI 307
L S ++ + +W+ S + N + GH V+ + WS + ++ A+CS D ++ I
Sbjct: 75 LASASFDTTVAVWDKKSG---EFECNATLEGHDNEVKSVTWSRS-GNLLATCSRDKSVWI 130
Query: 308 W------DTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGD 361
W D + H DV + W+ LLAS S D T ++ L
Sbjct: 131 WEIHHAPDQEDEYECVAVLNGHTQDVKKVCWHPQED-LLASASYDNTIRMYRQDLADSEW 189
Query: 362 SVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
++ E H V SI + G LA S D + +W
Sbjct: 190 EMLEPLESHSSTVWSISFDA-TGQRLASCSEDTTVKVW 226
Score = 57 (25.1 bits), Expect = 8.5e-10, Sum P(2) = 8.5e-10
Identities = 8/23 (34%), Positives = 16/23 (69%)
Query: 439 KDLKELHWHTQVPGMIVSTAADG 461
+D ++ WH VPG++++ + DG
Sbjct: 308 QDANKVAWHPTVPGLLLTASDDG 330
Score = 37 (18.1 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 439 KDLKELHWHTQVPGMIVSTAAD 460
+D+K++ WH Q ++ S + D
Sbjct: 154 QDVKKVCWHPQ-EDLLASASYD 174
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 169 (64.5 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 48/187 (25%), Positives = 88/187 (47%)
Query: 216 GAPQVLN-QSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPN 274
G P+ + Q+P++ GH+ E Y ++P L S + I LW D +
Sbjct: 48 GPPRCSSLQAPIMLLSGHEGEVYCCKFHPNG-STLASAGFDRLILLWNVYGDCD---NYA 103
Query: 275 PFIGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNR 334
GH+ +V +L ++ T+ + S S D +A+WD+ G+ + K H + VN R
Sbjct: 104 TLKGHSGAVMELHYN-TDGSMLFSASTDKTVAVWDSETGER-VKRLKGHTSFVNSCYPAR 161
Query: 335 LASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADN 394
L+ +GSDDGT + D+R + + F+ + + V ++ ++ ++ DN
Sbjct: 162 RGPQLVCTGSDDGTVKLWDIRK----KAAIQTFQ-NTYQVLAVTFNDTSDQIIS-GGIDN 215
Query: 395 QLTIWDL 401
+ +WDL
Sbjct: 216 DIKVWDL 222
Score = 122 (48.0 bits), Expect = 0.00017, P = 0.00017
Identities = 41/159 (25%), Positives = 68/159 (42%)
Query: 246 PGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNI 305
P + +G + + LW+ A N + A + D SD S +D +I
Sbjct: 164 PQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDT------SDQIISGGIDNDI 217
Query: 306 AIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVA 365
+WD R K + + H V +S + S LL++ D+ T + D+R + V
Sbjct: 218 KVWDLRQNKLTY-TMRGHADSVTGLSLSSEGSYLLSNAMDN-TVRVWDVRPFAPKERCVK 275
Query: 366 HFEYHKHP----VTSIEWSPHEGSTLAVSSADNQLTIWD 400
F+ + H + WSP +GS +A SAD + +WD
Sbjct: 276 IFQGNVHNFEKNLLRCSWSP-DGSKIAAGSADRFVYVWD 313
>TAIR|locus:2010356 [details] [associations]
symbol:ATAN11 "AT1G12910" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=NAS] [GO:0043153 "entrainment of circadian clock by
photoperiod" evidence=IEP] [GO:0048573 "photoperiodism, flowering"
evidence=RCA;IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009718 GO:GO:0048511 GO:GO:0044212
EMBL:AC012187 GO:GO:0048573 GO:GO:0043153 eggNOG:NOG314410
OMA:NKVQIVS HOGENOM:HOG000260968 KO:K11805 UniGene:At.23958
EMBL:U94746 EMBL:AY093101 EMBL:AY128776 EMBL:AY087676
IPI:IPI00520024 PIR:G86262 RefSeq:NP_172751.1 UniGene:At.62609
ProteinModelPortal:Q9LPV9 SMR:Q9LPV9 STRING:Q9LPV9 PaxDb:Q9LPV9
PRIDE:Q9LPV9 EnsemblPlants:AT1G12910.1 GeneID:837849
KEGG:ath:AT1G12910 GeneFarm:2811 TAIR:At1g12910 InParanoid:Q9LPV9
PhylomeDB:Q9LPV9 ProtClustDB:CLSN2682478 Genevestigator:Q9LPV9
Uniprot:Q9LPV9
Length = 346
Score = 167 (63.8 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 43/168 (25%), Positives = 77/168 (45%)
Query: 238 AIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFA 297
+ DWN P R+ + ++ +W+ +A VD I H V D+ W VFA
Sbjct: 140 SFDWNEAEPRRIGTSSTDTTCTIWDIEREA---VDTQ-LIAHDKEVFDIAWGGV--GVFA 193
Query: 298 SCSVDGNIAIWDTRVGKSALMSFKAHNADVNVI--SWNRLASCLLASG-SDDGTFSIHDL 354
S S DG++ ++D R + + + +++ D ++ WN+ +A+ D + D+
Sbjct: 194 SVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDI 253
Query: 355 RLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLS 402
R V + H+ V +I W+PH + + D+Q IWD+S
Sbjct: 254 RFPA---LPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDIS 298
>TAIR|locus:2153914 [details] [associations]
symbol:TTG1 "AT5G24520" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0010026 "trichome
differentiation" evidence=IMP] [GO:0045165 "cell fate commitment"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0032880 "regulation of protein localization"
evidence=RCA;IMP] [GO:0009723 "response to ethylene stimulus"
evidence=IEP] [GO:0009733 "response to auxin stimulus"
evidence=IEP] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009963 "positive regulation of flavonoid
biosynthetic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0009957
"epidermal cell fate specification" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0005737 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009733 GO:GO:0009723 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003677 GO:GO:0032880
EMBL:AB010068 eggNOG:NOG314410 HOGENOM:HOG000260968 GO:GO:0009957
GO:GO:0010026 ProtClustDB:CLSN2682478 EMBL:AJ133743 EMBL:AJ251522
EMBL:AJ251523 EMBL:BT020231 EMBL:BT020513 EMBL:AK227211
IPI:IPI00520475 RefSeq:NP_197840.1 RefSeq:NP_851069.1
RefSeq:NP_851070.1 UniGene:At.28124 ProteinModelPortal:Q9XGN1
SMR:Q9XGN1 IntAct:Q9XGN1 STRING:Q9XGN1 PaxDb:Q9XGN1 PRIDE:Q9XGN1
EnsemblPlants:AT5G24520.1 EnsemblPlants:AT5G24520.2
EnsemblPlants:AT5G24520.3 GeneID:832523 KEGG:ath:AT5G24520
GeneFarm:3759 TAIR:At5g24520 InParanoid:Q9XGN1 OMA:RACANAV
PhylomeDB:Q9XGN1 Genevestigator:Q9XGN1 GermOnline:AT5G24520
Uniprot:Q9XGN1
Length = 341
Score = 165 (63.1 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 47/167 (28%), Positives = 76/167 (45%)
Query: 238 AIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFA 297
+ DWN V P RL + ++ +W D +V I H V D+ W E+ VFA
Sbjct: 137 SFDWNDVEPKRLGTCSIDTTCTIW----DIEKSVVETQLIAHDKEVHDIAWG--EARVFA 190
Query: 298 SCSVDGNIAIWDTRVGKSALMSFKAHNADVNVI--SWNRLASCLLASG-SDDGTFSIHDL 354
S S DG++ I+D R + + + +++ D ++ +WN+ +A+ D I D+
Sbjct: 191 SVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDI 250
Query: 355 RLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDL 401
R VA E H+ V +I W+P + D Q IW+L
Sbjct: 251 R---SPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWEL 294
Score = 123 (48.4 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 51/204 (25%), Positives = 84/204 (41%)
Query: 251 SGDCNSCIHLWEPASDATWNVDPNPFIGHAASVE------DLQWSPTESDVFASCSVDGN 304
SGD + LWE D++ V+P + ++ + E W+ E +CS+D
Sbjct: 101 SGDF---LRLWEINEDSS-TVEPISVLNNSKTSEFCAPLTSFDWNDVEPKRLGTCSIDTT 156
Query: 305 IAIWDTRVGKSALMS-FKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSV 363
IWD + KS + + AH+ +V+ I+W + AS S DG+ I DLR K ++
Sbjct: 157 CTIWD--IEKSVVETQLIAHDKEVHDIAWGEAR--VFASVSADGSVRIFDLRD-KEHSTI 211
Query: 364 VAHFEYHKHPVTSIEWSPHEGSTLAVSSAD-NQLTIWDLSLXXXXXXXXXXXXXTREQVN 422
+ P+ + W+ + +A D N++ I D+ + VN
Sbjct: 212 IYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIR---SPTMPVAELERHQASVN 268
Query: 423 APEDLPPQLLFIHQGQKDLKELHW 446
A P I G D + L W
Sbjct: 269 AIAWAPQSCKHICSGGDDTQALIW 292
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 174 (66.3 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 49/154 (31%), Positives = 81/154 (52%)
Query: 248 RLVSGDCNSCIHLWEPAS-DATWNVDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNIA 306
+LVSG + + +W+PA+ + +D GH+ +VE L +SP + + AS S D I
Sbjct: 764 QLVSGSYDDTVKIWDPATGELLQTLD-----GHSGTVESLAFSP-DGKLLASGSYDNTID 817
Query: 307 IWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAH 366
+WD+ G+ L +F+ H + +++ LAS SDD T I DL G+ +
Sbjct: 818 LWDSATGE-LLQTFEGHPHSIWSVAFAPDGK-ELASASDDSTIKIWDLAT---GE-LQQT 871
Query: 367 FEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWD 400
+ H V S+ +SP +G LA SS D+ + +W+
Sbjct: 872 LDSHSQSVRSVAFSP-DGKLLASSSLDSTIKVWN 904
Score = 165 (63.1 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 43/140 (30%), Positives = 70/140 (50%)
Query: 263 PASDATWNVDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKA 322
P + TW+ + H VE + +SP + S S D + IWD G+ L +
Sbjct: 733 PKVEQTWSAEQQTLENHLGPVESVVFSP-DGKQLVSGSYDDTVKIWDPATGE-LLQTLDG 790
Query: 323 HNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPH 382
H+ V ++++ LLASGS D T + D G+ ++ FE H H + S+ ++P
Sbjct: 791 HSGTVESLAFSPDGK-LLASGSYDNTIDLWDSAT---GE-LLQTFEGHPHSIWSVAFAP- 844
Query: 383 EGSTLAVSSADNQLTIWDLS 402
+G LA +S D+ + IWDL+
Sbjct: 845 DGKELASASDDSTIKIWDLA 864
Score = 132 (51.5 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 47/173 (27%), Positives = 86/173 (49%)
Query: 229 FGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPA-SDATWNVDPNPFIGHAASVEDLQ 287
F GH A+ ++P LVSG ++ I LW+ A S+ +++ H+ SV +
Sbjct: 998 FKGHDLWIRAVAFSPDGK-HLVSGSDDNTIKLWDLATSELQQSLED-----HSRSVHAVA 1051
Query: 288 WSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDG 347
+SP + + AS S+D I +WD+ G+ + + H+ V ++++ LLAS S DG
Sbjct: 1052 FSPDDKQL-ASSSLDSTIKLWDSATGELQ-RTLEGHSQGVRSVTFSPDGK-LLASNSYDG 1108
Query: 348 TFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWD 400
T + + + ++ ++ V S+ +SP +G LA D+ + +WD
Sbjct: 1109 TIKLWNPLTGELQQTLTGRSDW----VDSVAFSP-DGKQLASGYYDSTIKLWD 1156
Score = 37 (18.1 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 6/15 (40%), Positives = 9/15 (60%)
Query: 39 KVWQPGVDKLEEGEE 53
KVW P +L++ E
Sbjct: 901 KVWNPATGELQQSLE 915
>WB|WBGene00021074 [details] [associations]
symbol:W07E6.2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000003
GeneTree:ENSGT00690000102167 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH InterPro:IPR012972
Pfam:PF08154 EMBL:FO081752 PIR:T33805 RefSeq:NP_493745.1
ProteinModelPortal:Q9TYV3 SMR:Q9TYV3 STRING:Q9TYV3 PaxDb:Q9TYV3
EnsemblMetazoa:W07E6.2.1 EnsemblMetazoa:W07E6.2.2 GeneID:173439
KEGG:cel:CELE_W07E6.2 UCSC:W07E6.2 CTD:173439 WormBase:W07E6.2
InParanoid:Q9TYV3 NextBio:879659 Uniprot:Q9TYV3
Length = 473
Score = 167 (63.8 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 48/157 (30%), Positives = 76/157 (48%)
Query: 244 VAPG-RLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFASCSVD 302
+A G RLVSG + + +W P + ++ N GH V + +SP ++ AS S D
Sbjct: 326 IAGGERLVSGSDDFTLFMWNP-KETKQSI--NRMTGHMQLVNQVVFSP-DTRYIASASFD 381
Query: 303 GNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDS 362
++ +W R GK L S + H V ++W+ S LL SGS D T + +L+ S
Sbjct: 382 KSVKLWCGRTGKY-LASLRGHVGPVYQVAWSA-DSRLLVSGSADSTLKVFELKT----KS 435
Query: 363 VVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
+ H V +++WSP EG+ + D L +W
Sbjct: 436 LYYDLPGHGDEVFTVDWSP-EGTKVVSGGKDKVLKLW 471
Score = 127 (49.8 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 44/158 (27%), Positives = 63/158 (39%)
Query: 225 PLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVE 284
PL HK I W+P A ++ S N I +W T H +
Sbjct: 139 PLHTCKSHKSWVLCIAWSPDAT-KIASACKNGEICIWNAK---TGEQIGKTLKRHKQWIT 194
Query: 285 DLQWSPTESD----VFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLL 340
L W P D + ASC DGNI IWDT G + + H A V + W L+
Sbjct: 195 SLAWQPMHKDPTCRLLASCGKDGNIFIWDTVQG-TVVRCLSGHTASVTCLRWG--GEGLI 251
Query: 341 ASGSDDGTFSIHDLRLLKGGDSVVA-HFEYHKHPVTSI 377
SGS D T +++ + D V+ + H H + ++
Sbjct: 252 YSGSQDRT-----VKMWRADDGVMCRNMTGHAHWINTL 284
Score = 124 (48.7 bits), Expect = 0.00013, P = 0.00013
Identities = 40/127 (31%), Positives = 61/127 (48%)
Query: 278 GHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLAS 337
GH V Q+SP + AS S D + IWD + + L + K+H + V I+W+ A+
Sbjct: 103 GHGEPVISAQFSP-DGRGLASGSGDQTMRIWDIEL-ELPLHTCKSHKSWVLCIAWSPDAT 160
Query: 338 CLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSP-HEGST---LAVSSAD 393
+AS +G I + K G+ + + HK +TS+ W P H+ T LA D
Sbjct: 161 -KIASACKNGEICIWNA---KTGEQIGKTLKRHKQWITSLAWQPMHKDPTCRLLASCGKD 216
Query: 394 NQLTIWD 400
+ IWD
Sbjct: 217 GNIFIWD 223
>DICTYBASE|DDB_G0295761 [details] [associations]
symbol:nle1 "putative notchless" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0295761 InterPro:IPR001632
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
KO:K14855 OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154
RefSeq:XP_002649195.1 ProteinModelPortal:C7FZX3
EnsemblProtists:DDB0252725 GeneID:8616962 KEGG:ddi:DDB_G0295761
Uniprot:C7FZX3
Length = 507
Score = 167 (63.8 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 47/151 (31%), Positives = 75/151 (49%)
Query: 249 LVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNIAIW 308
L+SG + + +W P+ T ++ + GH + + +SP + FAS S D +I +W
Sbjct: 366 LISGSDDFTVIMWNPSVTKT-SI--SRLTGHQQLINLVSFSP-DGRYFASASFDKSIKLW 421
Query: 309 DTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFE 368
D + GK L +F+ H V + W+ S L SGS D T I D++ K + H +
Sbjct: 422 DGQSGKF-LGNFRGHVGAVYQVCWSS-DSRYLVSGSKDSTLKIWDIKTKKMEKELPGHAD 479
Query: 369 YHKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
V +++WSP +G +A S D L IW
Sbjct: 480 ----EVYTVDWSP-DGDRVASGSKDRLLRIW 505
Score = 145 (56.1 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 54/213 (25%), Positives = 92/213 (43%)
Query: 198 DFRSHLNALAESETVAGHGAPQ-VLNQSPLVK----FGGHKDEGYAIDWNPVAPGRL-VS 251
+ ++HL L++ T++ + PQ V P+ + GH + ++P G + V
Sbjct: 100 NLKNHLEGLSDETTLSIYYQPQAVFRVRPVTRCASSMSGHTEAVLNCAFSPDGKGFVSVG 159
Query: 252 GDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTR 311
GD + + +W D + + GH V + WSP +S A+ ++G+I IW +
Sbjct: 160 GD--TTVRIW----DIYTSTPTHTLKGHTNWVLQVAWSP-DSKKIATAGMEGDIRIWCPQ 212
Query: 312 VGKSALMSFKAHNADVNVISWNRL---ASCL-LASGSDDGTFSIHDLRLLKGGDSVVAHF 367
GK + K H + +SW C+ LAS S D T I D K S+ H
Sbjct: 213 TGKQLGSTLKGHTKFITGLSWEPFHLNPKCVRLASSSKDSTIRIWDTESCKNLMSLSGH- 271
Query: 368 EYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWD 400
VT ++W EG + S D + +++
Sbjct: 272 ---TMSVTCLKWGG-EGLIYS-GSQDRTVRVFN 299
>UNIPROTKB|Q9BZK7 [details] [associations]
symbol:TBL1XR1 "F-box-like/WD repeat-containing protein
TBL1XR1" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IMP] [GO:0003714 "transcription corepressor
activity" evidence=IGI;IDA] [GO:0042393 "histone binding"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISS;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0008013 "beta-catenin binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=IDA] [GO:0000118
"histone deacetylase complex" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0044255 "cellular lipid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_111217 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0007219
GO:GO:0044255 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393
GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AF314544 EMBL:AF268193
EMBL:AK022956 EMBL:BC060320 EMBL:BC113421 IPI:IPI00002922
RefSeq:NP_078941.2 UniGene:Hs.581171 ProteinModelPortal:Q9BZK7
SMR:Q9BZK7 IntAct:Q9BZK7 STRING:Q9BZK7 PhosphoSite:Q9BZK7
DMDM:23396874 PaxDb:Q9BZK7 PRIDE:Q9BZK7 Ensembl:ENST00000430069
Ensembl:ENST00000457928 GeneID:79718 KEGG:hsa:79718 UCSC:uc003fiw.4
CTD:79718 GeneCards:GC03M176737 H-InvDB:HIX0147994 HGNC:HGNC:29529
HPA:HPA019182 MIM:608628 neXtProt:NX_Q9BZK7 PharmGKB:PA134928556
HOGENOM:HOG000220902 HOVERGEN:HBG050240 InParanoid:Q9BZK7
OMA:LANNHAD OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 GenomeRNAi:79718
NextBio:69065 PMAP-CutDB:Q9BZK7 ArrayExpress:Q9BZK7 Bgee:Q9BZK7
CleanEx:HS_TBL1XR1 Genevestigator:Q9BZK7 GermOnline:ENSG00000177565
Uniprot:Q9BZK7
Length = 514
Score = 167 (63.8 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 66/242 (27%), Positives = 105/242 (43%)
Query: 230 GGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWS 289
G HK +A+ WN L +G + I +W DA F H+A D+ W
Sbjct: 263 GQHKGPIFALKWNKKGNFILSAGVDKTTI-IW----DAHTGEAKQQFPFHSAPALDVDWQ 317
Query: 290 PTESDVFASCSVDGNIAIWDTRVGKSA-LMSFKAHNADVNVISWNRLASCLLASGSDDGT 348
++ FASCS D + I ++G+ + +F+ H +VN I W+ + LLAS SDD T
Sbjct: 318 --SNNTFASCSTD--MCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGN-LLASCSDDMT 372
Query: 349 FSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGST--------LAVSSADNQLTIWD 400
I ++ D+ V + H + +I+WSP T LA +S D+ + +WD
Sbjct: 373 LKIWSMKQ----DNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWD 428
Query: 401 LSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQKDLKELH-WHTQVPGMIVSTAA 459
+ +E V + P ++ G D K +H W+TQ ++ S
Sbjct: 429 VDRGICIHTLTKH----QEPVYSVA-FSPDGRYLASGSFD-KCVHIWNTQTGALVHSYRG 482
Query: 460 DG 461
G
Sbjct: 483 TG 484
Score = 138 (53.6 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 48/166 (28%), Positives = 75/166 (45%)
Query: 238 AIDWNPVAPGRLVS-GDCNSCIHLWEPASDATWNVDPNPFIG-HAASVEDLQWSPTESDV 295
++DWN + G L++ G + +W D N+ +G H + L+W+ + +
Sbjct: 230 SLDWN--SEGTLLATGSYDGFARIW--TKDG--NLAST--LGQHKGPIFALKWNK-KGNF 280
Query: 296 FASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLR 355
S VD IWD G+ A F H+A + W ++ AS S D IH +
Sbjct: 281 ILSAGVDKTTIIWDAHTGE-AKQQFPFHSAPALDVDWQ--SNNTFASCSTD--MCIHVCK 335
Query: 356 LLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDL 401
L G D + F+ H + V +I+W P G+ LA S D L IW +
Sbjct: 336 L--GQDRPIKTFQGHTNEVNAIKWDP-TGNLLASCSDDMTLKIWSM 378
Score = 129 (50.5 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 45/174 (25%), Positives = 75/174 (43%)
Query: 231 GHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAA--------- 281
GH+ E + WNPV+ L SG +S +W + ++T + + H
Sbjct: 167 GHESEVFICAWNPVSD-LLASGSGDSTARIWNLSENST-SGSTQLVLRHCIREGGQDVPS 224
Query: 282 --SVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCL 339
V L W+ +E + A+ S DG IW T+ G A + H + + WN+ + +
Sbjct: 225 NKDVTSLDWN-SEGTLLATGSYDGFARIW-TKDGNLA-STLGQHKGPIFALKWNKKGNFI 281
Query: 340 LASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSAD 393
L++G D T I D G++ F +H P ++W + +T A S D
Sbjct: 282 LSAGVDKTTI-IWDAHT---GEAK-QQFPFHSAPALDVDWQSN--NTFASCSTD 328
>UNIPROTKB|F1SGD0 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 OMA:GYARIWM
EMBL:CU856317 Ensembl:ENSSSCT00000012871 Uniprot:F1SGD0
Length = 514
Score = 167 (63.8 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 66/242 (27%), Positives = 105/242 (43%)
Query: 230 GGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWS 289
G HK +A+ WN L +G + I +W DA F H+A D+ W
Sbjct: 263 GQHKGPIFALKWNKKGNFILSAGVDKTTI-IW----DAHTGEAKQQFPFHSAPALDVDWQ 317
Query: 290 PTESDVFASCSVDGNIAIWDTRVGKSA-LMSFKAHNADVNVISWNRLASCLLASGSDDGT 348
++ FASCS D + I ++G+ + +F+ H +VN I W+ + LLAS SDD T
Sbjct: 318 --SNNTFASCSTD--MCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGN-LLASCSDDMT 372
Query: 349 FSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGST--------LAVSSADNQLTIWD 400
I ++ D+ V + H + +I+WSP T LA +S D+ + +WD
Sbjct: 373 LKIWSMKQ----DNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWD 428
Query: 401 LSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQKDLKELH-WHTQVPGMIVSTAA 459
+ +E V + P ++ G D K +H W+TQ ++ S
Sbjct: 429 VDRGICIHTLTKH----QEPVYSVA-FSPDGRYLASGSFD-KCVHIWNTQTGALVHSYRG 482
Query: 460 DG 461
G
Sbjct: 483 TG 484
Score = 138 (53.6 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 48/166 (28%), Positives = 75/166 (45%)
Query: 238 AIDWNPVAPGRLVS-GDCNSCIHLWEPASDATWNVDPNPFIG-HAASVEDLQWSPTESDV 295
++DWN + G L++ G + +W D N+ +G H + L+W+ + +
Sbjct: 230 SLDWN--SEGTLLATGSYDGFARIW--TKDG--NLAST--LGQHKGPIFALKWNK-KGNF 280
Query: 296 FASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLR 355
S VD IWD G+ A F H+A + W ++ AS S D IH +
Sbjct: 281 ILSAGVDKTTIIWDAHTGE-AKQQFPFHSAPALDVDWQ--SNNTFASCSTD--MCIHVCK 335
Query: 356 LLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDL 401
L G D + F+ H + V +I+W P G+ LA S D L IW +
Sbjct: 336 L--GQDRPIKTFQGHTNEVNAIKWDP-TGNLLASCSDDMTLKIWSM 378
Score = 129 (50.5 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 45/174 (25%), Positives = 75/174 (43%)
Query: 231 GHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAA--------- 281
GH+ E + WNPV+ L SG +S +W + ++T + + H
Sbjct: 167 GHESEVFICAWNPVSD-LLASGSGDSTARIWNLSENST-SGSTQLVLRHCIREGGQDVPS 224
Query: 282 --SVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCL 339
V L W+ +E + A+ S DG IW T+ G A + H + + WN+ + +
Sbjct: 225 NKDVTSLDWN-SEGTLLATGSYDGFARIW-TKDGNLA-STLGQHKGPIFALKWNKKGNFI 281
Query: 340 LASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSAD 393
L++G D T I D G++ F +H P ++W + +T A S D
Sbjct: 282 LSAGVDKTTI-IWDAHT---GEAK-QQFPFHSAPALDVDWQSN--NTFASCSTD 328
>MGI|MGI:2441730 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1X-linked receptor 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=ISO;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IC]
[GO:0005876 "spindle microtubule" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0060070 "canonical
Wnt receptor signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:2441730 GO:GO:0017053
GO:GO:0003714 GO:GO:0045892 GO:GO:0005654 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024 KO:K04508
CTD:79718 HOGENOM:HOG000220902 HOVERGEN:HBG050240 OMA:LANNHAD
OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 EMBL:AF268195 EMBL:AK029595
EMBL:AK033347 EMBL:AK036064 EMBL:AK136255 EMBL:BC018512
IPI:IPI00308283 RefSeq:NP_109657.2 UniGene:Mm.202966
UniGene:Mm.446265 ProteinModelPortal:Q8BHJ5 SMR:Q8BHJ5
IntAct:Q8BHJ5 STRING:Q8BHJ5 PhosphoSite:Q8BHJ5 PaxDb:Q8BHJ5
PRIDE:Q8BHJ5 DNASU:81004 Ensembl:ENSMUST00000063988 GeneID:81004
KEGG:mmu:81004 InParanoid:Q8BHJ5 NextBio:350342 Bgee:Q8BHJ5
CleanEx:MM_TBL1XR1 Genevestigator:Q8BHJ5
GermOnline:ENSMUSG00000027630 Uniprot:Q8BHJ5
Length = 514
Score = 167 (63.8 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 66/242 (27%), Positives = 105/242 (43%)
Query: 230 GGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWS 289
G HK +A+ WN L +G + I +W DA F H+A D+ W
Sbjct: 263 GQHKGPIFALKWNKKGNFILSAGVDKTTI-IW----DAHTGEAKQQFPFHSAPALDVDWQ 317
Query: 290 PTESDVFASCSVDGNIAIWDTRVGKSA-LMSFKAHNADVNVISWNRLASCLLASGSDDGT 348
++ FASCS D + I ++G+ + +F+ H +VN I W+ + LLAS SDD T
Sbjct: 318 --SNNTFASCSTD--MCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGN-LLASCSDDMT 372
Query: 349 FSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGST--------LAVSSADNQLTIWD 400
I ++ D+ V + H + +I+WSP T LA +S D+ + +WD
Sbjct: 373 LKIWSMKQ----DNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWD 428
Query: 401 LSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQKDLKELH-WHTQVPGMIVSTAA 459
+ +E V + P ++ G D K +H W+TQ ++ S
Sbjct: 429 VDRGICIHTLTKH----QEPVYSVA-FSPDGRYLASGSFD-KCVHIWNTQTGALVHSYRG 482
Query: 460 DG 461
G
Sbjct: 483 TG 484
Score = 138 (53.6 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 48/166 (28%), Positives = 75/166 (45%)
Query: 238 AIDWNPVAPGRLVS-GDCNSCIHLWEPASDATWNVDPNPFIG-HAASVEDLQWSPTESDV 295
++DWN + G L++ G + +W D N+ +G H + L+W+ + +
Sbjct: 230 SLDWN--SEGTLLATGSYDGFARIW--TKDG--NLAST--LGQHKGPIFALKWNK-KGNF 280
Query: 296 FASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLR 355
S VD IWD G+ A F H+A + W ++ AS S D IH +
Sbjct: 281 ILSAGVDKTTIIWDAHTGE-AKQQFPFHSAPALDVDWQ--SNNTFASCSTD--MCIHVCK 335
Query: 356 LLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDL 401
L G D + F+ H + V +I+W P G+ LA S D L IW +
Sbjct: 336 L--GQDRPIKTFQGHTNEVNAIKWDP-TGNLLASCSDDMTLKIWSM 378
Score = 129 (50.5 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 46/175 (26%), Positives = 75/175 (42%)
Query: 231 GHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFI-GHAA-------- 281
GH+ E + WNPV+ L SG +S +W + ++T P + H
Sbjct: 167 GHESEVFICAWNPVSD-LLASGSGDSTARIWNLSENSTSG--PTQLVLRHCIREGGQDVP 223
Query: 282 ---SVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASC 338
V L W+ +E + A+ S DG IW T+ G A + H + + WN+ +
Sbjct: 224 SNKDVTSLDWN-SEGTLLATGSYDGFARIW-TKDGNLA-STLGQHKGPIFALKWNKKGNF 280
Query: 339 LLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSAD 393
+L++G D T I D G++ F +H P ++W + +T A S D
Sbjct: 281 ILSAGVDKTTI-IWDAHT---GEAK-QQFPFHSAPALDVDWQSN--NTFASCSTD 328
>RGD|1560053 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1 X-linked receptor 1"
species:10116 "Rattus norvegicus" [GO:0000118 "histone deacetylase
complex" evidence=IEA;ISO] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003714 "transcription corepressor
activity" evidence=IEA;ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005876
"spindle microtubule" evidence=IEA;ISO] [GO:0008013 "beta-catenin
binding" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0017053 "transcriptional repressor complex"
evidence=IEA;ISO] [GO:0042393 "histone binding" evidence=IEA;ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA;ISO] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0047485
"protein N-terminus binding" evidence=IEA;ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 RGD:1560053 GO:GO:0017053 GO:GO:0003714
GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513
GO:GO:0060070 GO:GO:0005876 EMBL:CH473961 GO:GO:0000118
GeneTree:ENSGT00690000102024 KO:K04508 CTD:79718 OrthoDB:EOG412M5M
IPI:IPI00367976 RefSeq:NP_001102411.1 UniGene:Rn.140831
Ensembl:ENSRNOT00000015573 GeneID:365755 KEGG:rno:365755
UCSC:RGD:1560053 NextBio:687981 Uniprot:D3ZNF4
Length = 514
Score = 167 (63.8 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 66/242 (27%), Positives = 105/242 (43%)
Query: 230 GGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWS 289
G HK +A+ WN L +G + I +W DA F H+A D+ W
Sbjct: 263 GQHKGPIFALKWNKKGNFILSAGVDKTTI-IW----DAHTGEAKQQFPFHSAPALDVDWQ 317
Query: 290 PTESDVFASCSVDGNIAIWDTRVGKSA-LMSFKAHNADVNVISWNRLASCLLASGSDDGT 348
++ FASCS D + I ++G+ + +F+ H +VN I W+ + LLAS SDD T
Sbjct: 318 --SNNTFASCSTD--MCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGN-LLASCSDDMT 372
Query: 349 FSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGST--------LAVSSADNQLTIWD 400
I ++ D+ V + H + +I+WSP T LA +S D+ + +WD
Sbjct: 373 LKIWSMKQ----DNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWD 428
Query: 401 LSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQKDLKELH-WHTQVPGMIVSTAA 459
+ +E V + P ++ G D K +H W+TQ ++ S
Sbjct: 429 VDRGICIHTLTKH----QEPVYSVA-FSPDGRYLASGSFD-KCVHIWNTQTGALVHSYRG 482
Query: 460 DG 461
G
Sbjct: 483 TG 484
Score = 138 (53.6 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 48/166 (28%), Positives = 75/166 (45%)
Query: 238 AIDWNPVAPGRLVS-GDCNSCIHLWEPASDATWNVDPNPFIG-HAASVEDLQWSPTESDV 295
++DWN + G L++ G + +W D N+ +G H + L+W+ + +
Sbjct: 230 SLDWN--SEGTLLATGSYDGFARIW--TKDG--NLAST--LGQHKGPIFALKWNK-KGNF 280
Query: 296 FASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLR 355
S VD IWD G+ A F H+A + W ++ AS S D IH +
Sbjct: 281 ILSAGVDKTTIIWDAHTGE-AKQQFPFHSAPALDVDWQ--SNNTFASCSTD--MCIHVCK 335
Query: 356 LLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDL 401
L G D + F+ H + V +I+W P G+ LA S D L IW +
Sbjct: 336 L--GQDRPIKTFQGHTNEVNAIKWDP-TGNLLASCSDDMTLKIWSM 378
Score = 129 (50.5 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 46/175 (26%), Positives = 75/175 (42%)
Query: 231 GHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFI-GHAA-------- 281
GH+ E + WNPV+ L SG +S +W + ++T P + H
Sbjct: 167 GHESEVFICAWNPVSD-LLASGSGDSTARIWNLSENSTSG--PTQLVLRHCIREGGQDVP 223
Query: 282 ---SVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASC 338
V L W+ +E + A+ S DG IW T+ G A + H + + WN+ +
Sbjct: 224 SNKDVTSLDWN-SEGTLLATGSYDGFARIW-TKDGNLA-STLGQHKGPIFALKWNKKGNF 280
Query: 339 LLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSAD 393
+L++G D T I D G++ F +H P ++W + +T A S D
Sbjct: 281 ILSAGVDKTTI-IWDAHT---GEAK-QQFPFHSAPALDVDWQSN--NTFASCSTD 328
>UNIPROTKB|Q5E9I7 [details] [associations]
symbol:WDR77 "Methylosome protein 50" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
EMBL:BT020933 EMBL:BC133485 IPI:IPI00718125 RefSeq:NP_001015584.1
UniGene:Bt.9147 ProteinModelPortal:Q5E9I7 STRING:Q5E9I7
PRIDE:Q5E9I7 GeneID:512993 KEGG:bta:512993 CTD:79084
HOGENOM:HOG000035094 HOVERGEN:HBG052458 InParanoid:Q5E9I7 KO:K13221
OrthoDB:EOG4MPHQT NextBio:20870649 Uniprot:Q5E9I7
Length = 342
Score = 163 (62.4 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 53/185 (28%), Positives = 83/185 (44%)
Query: 222 NQSPLV-KFGGHKDEGYAIDWNPVAPG-RLVSGDCNSCIHLWEPASDATWNVDPNPFIGH 279
N++ +V KF ++ + + ++ G VSG + CI +W+ A N + H
Sbjct: 111 NETLIVSKFCKYEHDDIVSTVSVLSSGTHAVSGSKDFCIKVWDLAQQMVLN----SYRAH 166
Query: 280 AASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSAL-MSFKAHNADVNVISWNRLASC 338
+ V + SP + VF SC D I +WDTR K A M A ++W+ S
Sbjct: 167 SGQVTCVAASPHKDSVFLSCGEDNRILLWDTRCPKPASQMGCSASGYLPTSLTWHPQQSE 226
Query: 339 LLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTI 398
+ G ++GT S+ D + G +V + H VT + +SPH LA S D L +
Sbjct: 227 VFVFGDENGTVSLVDTK--SAGCAVSS--VVHSQCVTGLVFSPHSAPFLASVSEDCSLAV 282
Query: 399 WDLSL 403
D L
Sbjct: 283 LDSGL 287
>UNIPROTKB|F1MFJ6 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024
EMBL:DAAA02002018 EMBL:DAAA02002019 EMBL:DAAA02002020
EMBL:DAAA02002021 EMBL:DAAA02002022 EMBL:DAAA02002023
EMBL:DAAA02002024 IPI:IPI00732449 UniGene:Bt.25104
ProteinModelPortal:F1MFJ6 Ensembl:ENSBTAT00000029211 OMA:GYARIWM
NextBio:20899067 Uniprot:F1MFJ6
Length = 514
Score = 166 (63.5 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 65/242 (26%), Positives = 107/242 (44%)
Query: 230 GGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWS 289
G HK +A+ WN L +G + I +W+ + + P F H+A D+ W
Sbjct: 263 GQHKGPIFALKWNKKGNFILSAGVDKTTI-IWDAHTGEAKQLFP--F--HSAPALDVDWQ 317
Query: 290 PTESDVFASCSVDGNIAIWDTRVGKSA-LMSFKAHNADVNVISWNRLASCLLASGSDDGT 348
++ FASCS D + I ++G+ + +F+ H +VN I W+ + LLAS SDD T
Sbjct: 318 --SNNTFASCSTD--MCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGN-LLASCSDDMT 372
Query: 349 FSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGST--------LAVSSADNQLTIWD 400
I ++ D+ V + H + +I+WSP T LA +S D+ + +WD
Sbjct: 373 LKIWSMKQ----DNCVHDLQAHNKEIYTIKWSPTGPGTSNPNANLMLASASFDSTVRLWD 428
Query: 401 LSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQKDLKELH-WHTQVPGMIVSTAA 459
+ +E V + P ++ G D K +H W+TQ ++ S
Sbjct: 429 VDRGICIHTLTKH----QEPVYSVA-FSPDGRYLASGSFD-KCVHIWNTQTGALVHSYRG 482
Query: 460 DG 461
G
Sbjct: 483 TG 484
Score = 136 (52.9 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 47/166 (28%), Positives = 76/166 (45%)
Query: 238 AIDWNPVAPGRLVS-GDCNSCIHLWEPASDATWNVDPNPFIG-HAASVEDLQWSPTESDV 295
++DWN + G L++ G + +W D N+ +G H + L+W+ + +
Sbjct: 230 SLDWN--SEGTLLATGSYDGFARIW--TKDG--NLAST--LGQHKGPIFALKWNK-KGNF 280
Query: 296 FASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLR 355
S VD IWD G++ + F H+A + W ++ AS S D IH +
Sbjct: 281 ILSAGVDKTTIIWDAHTGEAKQL-FPFHSAPALDVDWQ--SNNTFASCSTD--MCIHVCK 335
Query: 356 LLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDL 401
L G D + F+ H + V +I+W P G+ LA S D L IW +
Sbjct: 336 L--GQDRPIKTFQGHTNEVNAIKWDP-TGNLLASCSDDMTLKIWSM 378
Score = 127 (49.8 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 45/174 (25%), Positives = 75/174 (43%)
Query: 231 GHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAA--------- 281
GH+ E + WNPV+ L SG +S +W + ++T + + H
Sbjct: 167 GHESEVFICAWNPVSD-LLASGSGDSTARIWNLSENST-SGSTQLVLRHCIREGGQDVPS 224
Query: 282 --SVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCL 339
V L W+ +E + A+ S DG IW T+ G A + H + + WN+ + +
Sbjct: 225 NKDVTSLDWN-SEGTLLATGSYDGFARIW-TKDGNLA-STLGQHKGPIFALKWNKKGNFI 281
Query: 340 LASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSAD 393
L++G D T I D G++ F +H P ++W + +T A S D
Sbjct: 282 LSAGVDKTTI-IWDAHT---GEAKQL-FPFHSAPALDVDWQSN--NTFASCSTD 328
>GENEDB_PFALCIPARUM|PF13_0149 [details] [associations]
symbol:PF13_0149 "chromatin assembly factor 1
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0006333
"chromatin assembly or disassembly" evidence=ISS] [GO:0051082
"unfolded protein binding" evidence=ISS] [GO:0042393 "histone
binding" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0051082 GO:GO:0003682 GO:GO:0006333
GO:GO:0042393 GO:GO:0005678 EMBL:AL844509 KO:K10752
InterPro:IPR022052 Pfam:PF12265 OMA:EVNYLSF RefSeq:XP_001350006.1
ProteinModelPortal:Q8IE52 EnsemblProtists:PF13_0149:mRNA
GeneID:814119 KEGG:pfa:PF13_0149 EuPathDB:PlasmoDB:PF3D7_1329300
HOGENOM:HOG000283238 ProtClustDB:CLSZ2500737 Uniprot:Q8IE52
Length = 582
Score = 151 (58.2 bits), Expect = 3.6e-09, Sum P(3) = 3.6e-09
Identities = 45/181 (24%), Positives = 77/181 (42%)
Query: 285 DLQWSPTESDVFASCSVDGNIAIWDTRVGK---SALMSFKAHNADVNVISWNRLASCLLA 341
D+ + P S+ C +G ++I+D R A + F +N +N S++ + + +
Sbjct: 392 DIFFHPKFSNALGVCDDNGYMSIYDIRKKNFFTKAEICFNDYNEPMNTFSFDNFSEYIFS 451
Query: 342 SGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDL 401
G DG S+ D+R K +S++ +YH + I++ A S D IWD+
Sbjct: 452 CGYSDGLISVWDMRYNK--ESLLK-LKYHTQGINRIKFGMISSGIFASCSDDGTACIWDI 508
Query: 402 SLXXXXXXXXXXXXXTREQV-NAPEDLPPQLLFIHQGQ-KDLKELHWHTQVPGMIVSTAA 459
S T + + N P +P QLLF+H G + +L W I +
Sbjct: 509 S--RNNNTQILPLQKTEDDIYNNPNPVPKQLLFVHGGHIGSIYDLAWANSNTFTIATVGV 566
Query: 460 D 460
D
Sbjct: 567 D 567
Score = 57 (25.1 bits), Expect = 3.6e-09, Sum P(3) = 3.6e-09
Identities = 20/85 (23%), Positives = 38/85 (44%)
Query: 159 PILQLR-KVAHQGCVNRIRAMSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGHGA 217
P +++ K+ H G V R + N + G+ ++D+ H + ++ T
Sbjct: 139 PSFEVKAKLLHPGEVIRATNLPSNSFFIVTQTSNGNALLFDYTKHPSFPSDMSTCY---- 194
Query: 218 PQVLNQSPLVKFGGHKDEGYAIDWN 242
PQ++ +K GH +EG + WN
Sbjct: 195 PQMI-----LK--GHTNEGSGLCWN 212
Score = 42 (19.8 bits), Expect = 3.6e-09, Sum P(3) = 3.6e-09
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 58 PTAYNSLHAFHIGWPCLSFDIL 79
P Y+SL + WP L+ + L
Sbjct: 49 PFLYSSLLKHKLDWPSLTVEFL 70
>UNIPROTKB|Q8IE52 [details] [associations]
symbol:PF13_0149 "Chromatin assembly factor 1 subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0003682
"chromatin binding" evidence=ISS] [GO:0006333 "chromatin assembly
or disassembly" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0051082 "unfolded protein binding" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0051082 GO:GO:0003682 GO:GO:0006333
GO:GO:0042393 GO:GO:0005678 EMBL:AL844509 KO:K10752
InterPro:IPR022052 Pfam:PF12265 OMA:EVNYLSF RefSeq:XP_001350006.1
ProteinModelPortal:Q8IE52 EnsemblProtists:PF13_0149:mRNA
GeneID:814119 KEGG:pfa:PF13_0149 EuPathDB:PlasmoDB:PF3D7_1329300
HOGENOM:HOG000283238 ProtClustDB:CLSZ2500737 Uniprot:Q8IE52
Length = 582
Score = 151 (58.2 bits), Expect = 3.6e-09, Sum P(3) = 3.6e-09
Identities = 45/181 (24%), Positives = 77/181 (42%)
Query: 285 DLQWSPTESDVFASCSVDGNIAIWDTRVGK---SALMSFKAHNADVNVISWNRLASCLLA 341
D+ + P S+ C +G ++I+D R A + F +N +N S++ + + +
Sbjct: 392 DIFFHPKFSNALGVCDDNGYMSIYDIRKKNFFTKAEICFNDYNEPMNTFSFDNFSEYIFS 451
Query: 342 SGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDL 401
G DG S+ D+R K +S++ +YH + I++ A S D IWD+
Sbjct: 452 CGYSDGLISVWDMRYNK--ESLLK-LKYHTQGINRIKFGMISSGIFASCSDDGTACIWDI 508
Query: 402 SLXXXXXXXXXXXXXTREQV-NAPEDLPPQLLFIHQGQ-KDLKELHWHTQVPGMIVSTAA 459
S T + + N P +P QLLF+H G + +L W I +
Sbjct: 509 S--RNNNTQILPLQKTEDDIYNNPNPVPKQLLFVHGGHIGSIYDLAWANSNTFTIATVGV 566
Query: 460 D 460
D
Sbjct: 567 D 567
Score = 57 (25.1 bits), Expect = 3.6e-09, Sum P(3) = 3.6e-09
Identities = 20/85 (23%), Positives = 38/85 (44%)
Query: 159 PILQLR-KVAHQGCVNRIRAMSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGHGA 217
P +++ K+ H G V R + N + G+ ++D+ H + ++ T
Sbjct: 139 PSFEVKAKLLHPGEVIRATNLPSNSFFIVTQTSNGNALLFDYTKHPSFPSDMSTCY---- 194
Query: 218 PQVLNQSPLVKFGGHKDEGYAIDWN 242
PQ++ +K GH +EG + WN
Sbjct: 195 PQMI-----LK--GHTNEGSGLCWN 212
Score = 42 (19.8 bits), Expect = 3.6e-09, Sum P(3) = 3.6e-09
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 58 PTAYNSLHAFHIGWPCLSFDIL 79
P Y+SL + WP L+ + L
Sbjct: 49 PFLYSSLLKHKLDWPSLTVEFL 70
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 167 (63.8 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 69/243 (28%), Positives = 110/243 (45%)
Query: 168 HQGCVNRIRAMSQNPHICASWADTGHVQVWDF----RSHLNAL-AESETVAGHGAPQVLN 222
H G +N ++S + + A ++VWD ++ AL AE+++ P
Sbjct: 352 HNG-LN-CSSISHDGSLVAGGFSDSSIKVWDMAKIGQAGSGALQAENDSSDQSIGPNGRR 409
Query: 223 QSPLVKFGGHKDEGYAIDWNPVAPGRLV-SGDCNSCIHLWEPASDATWNVDPNPFIGHAA 281
L+ GH Y+ ++P PG V S ++ I LW +A + GH
Sbjct: 410 SYTLLL--GHSGPVYSATFSP--PGDFVLSSSADTTIRLWSTKLNANLVC----YKGHNY 461
Query: 282 SVEDLQWSPTESDVFASCSVDGNIAIWDT-RVGKSALMSFKAHNADVNVISWNRLASC-L 339
V D Q+SP FASCS D IW R+ +M+ H +DV+ + W+ +C
Sbjct: 462 PVWDAQFSPF-GHYFASCSHDRTARIWSMDRIQPLRIMA--GHLSDVDCVQWH--PNCNY 516
Query: 340 LASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
+A+GS D T + D++ G+ V F H+ V S+ SP +G +A D + +W
Sbjct: 517 IATGSSDKTVRLWDVQT---GECVRI-FIGHRSMVLSLAMSP-DGRYMASGDEDGTIMMW 571
Query: 400 DLS 402
DLS
Sbjct: 572 DLS 574
Score = 132 (51.5 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 43/151 (28%), Positives = 71/151 (47%)
Query: 256 SCIHLWEPASDATWNVDP-NPF---IGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTR 311
SC H + W++D P GH + V+ +QW P + A+ S D + +WD +
Sbjct: 477 SCSH---DRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPN-CNYIATGSSDKTVRLWDVQ 532
Query: 312 VGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHK 371
G+ + F H + V ++ + +ASG +DGT + DL + + H
Sbjct: 533 TGECVRI-FIGHRSMVLSLAMSPDGR-YMASGDEDGTIMMWDLSTAR----CITPLMGHN 586
Query: 372 HPVTSIEWSPHEGSTLAVSSADNQLTIWDLS 402
V S+ +S EGS LA SAD + +WD++
Sbjct: 587 SCVWSLSYSG-EGSLLASGSADCTVKLWDVT 616
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 167 (63.8 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 63/213 (29%), Positives = 95/213 (44%)
Query: 191 TGHVQVWDFRSHLNALAESETVAGHGAPQVLNQSPLVKFGGHKDEGYAIDWNP-VAP-GR 248
TG V F +N L + +L S +V + GH Y + W+ AP G
Sbjct: 450 TGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHV---YPV-WDVRFAPHGY 505
Query: 249 -LVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNIAI 307
VS + LW S+ V F+GH + V+ +Q+ P S+ A+ S D + +
Sbjct: 506 YFVSCSYDKTARLWATDSNQALRV----FVGHLSDVDCVQFHPN-SNYVATGSSDRTVRL 560
Query: 308 WDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHF 367
WD G+S + H V+ ++++ LASGS D I DL S+V
Sbjct: 561 WDNMTGQSVRL-MTGHKGSVSSLAFSACGR-YLASGSVDHNIIIWDL----SNGSLVTTL 614
Query: 368 EYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWD 400
H VT+I +S +G+ LA + DN LT+WD
Sbjct: 615 LRHTSTVTTITFS-RDGTVLAAAGLDNNLTLWD 646
Score = 148 (57.2 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 55/172 (31%), Positives = 80/172 (46%)
Query: 231 GHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSP 290
GH Y + P L+S +S I LW S TW+ + GH V D++++P
Sbjct: 448 GHTGPVYRCAFAPEM-NLLLSCSEDSTIRLW---SLLTWSCVVT-YRGHVYPVWDVRFAP 502
Query: 291 TESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFS 350
F SCS D +W T AL F H +DV+ + ++ ++ +A+GS D T
Sbjct: 503 -HGYYFVSCSYDKTARLWATD-SNQALRVFVGHLSDVDCVQFHPNSN-YVATGSSDRTVR 559
Query: 351 IHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLS 402
+ D G SV HK V+S+ +S G LA S D+ + IWDLS
Sbjct: 560 LWDNMT---GQSVRL-MTGHKGSVSSLAFSAC-GRYLASGSVDHNIIIWDLS 606
>UNIPROTKB|G5E5H0 [details] [associations]
symbol:WDR77 "Methylosome protein 50" species:9913 "Bos
taurus" [GO:0060770 "negative regulation of epithelial cell
proliferation involved in prostate gland development" evidence=IEA]
[GO:0060528 "secretory columnal luminar epithelial cell
differentiation involved in prostate glandular acinus development"
evidence=IEA] [GO:0030374 "ligand-dependent nuclear receptor
transcription coactivator activity" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005794
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 GO:GO:0006357 GO:GO:0060770
GO:GO:0030374 GO:GO:0060528 UniGene:Bt.9147 OMA:MRKETPP
GeneTree:ENSGT00390000010711 EMBL:DAAA02007524
ProteinModelPortal:G5E5H0 Ensembl:ENSBTAT00000018753 Uniprot:G5E5H0
Length = 342
Score = 161 (61.7 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 53/185 (28%), Positives = 82/185 (44%)
Query: 222 NQSPLV-KFGGHKDEGYAIDWNPVAPG-RLVSGDCNSCIHLWEPASDATWNVDPNPFIGH 279
N++ +V KF ++ + + ++ G VSG + CI +W+ A N + H
Sbjct: 111 NETLIVSKFCKYEHDDIVSTVSVLSSGTHAVSGSKDFCIKVWDLAQQMVLN----SYRAH 166
Query: 280 AASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSAL-MSFKAHNADVNVISWNRLASC 338
+ V + SP + VF SC D I +WDTR K A M A ++W+ S
Sbjct: 167 SGQVTCVAASPHKDSVFLSCGEDNRILLWDTRCPKPASQMGCSASGYLPTSLTWHPQQSE 226
Query: 339 LLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTI 398
+ G ++GT S+ D + S V H + VT + +SPH LA S D L +
Sbjct: 227 VFVFGDENGTVSLVDTKSAGCALSSVVHSQC----VTGLVFSPHSAPFLASVSEDCSLAV 282
Query: 399 WDLSL 403
D L
Sbjct: 283 LDSGL 287
>RGD|1310479 [details] [associations]
symbol:Wdr77 "WD repeat domain 77" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=ISO;ISS] [GO:0005794 "Golgi apparatus"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISO] [GO:0008285
"negative regulation of cell proliferation" evidence=ISO]
[GO:0030374 "ligand-dependent nuclear receptor transcription
coactivator activity" evidence=ISO] [GO:0060528 "secretory columnal
luminar epithelial cell differentiation involved in prostate
glandular acinus development" evidence=ISO] [GO:0060770 "negative
regulation of epithelial cell proliferation involved in prostate
gland development" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1310479 GO:GO:0005634 GO:GO:0005794 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319 GO:GO:0006357
GO:GO:0060770 GO:GO:0030374 GO:GO:0060528 CTD:79084
HOVERGEN:HBG052458 KO:K13221 OrthoDB:EOG4MPHQT OMA:MRKETPP
EMBL:BC097367 IPI:IPI00368916 RefSeq:NP_001008771.2
UniGene:Rn.14128 ProteinModelPortal:Q4QR85 STRING:Q4QR85
PhosphoSite:Q4QR85 PRIDE:Q4QR85 GeneID:310769 KEGG:rno:310769
UCSC:RGD:1310479 InParanoid:Q4QR85 NextBio:662587
ArrayExpress:Q4QR85 Genevestigator:Q4QR85 Uniprot:Q4QR85
Length = 342
Score = 161 (61.7 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 53/184 (28%), Positives = 81/184 (44%)
Query: 222 NQSPLV-KFGGHKDEGYAIDWNPVAPG-RLVSGDCNSCIHLWEPASDATWNVDPNPFIGH 279
N++ +V KF ++ + ++ G + VSG + CI +W+ A + N + H
Sbjct: 111 NETLIVSKFCKYEHDDIVSTVTVLSSGTQAVSGSKDFCIKIWDLAQQMSLN----SYRAH 166
Query: 280 AASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSAL-MSFKAHNADVNVISWNRLASC 338
A V + SP VF SCS D I +WDTR K A M A ++W+ S
Sbjct: 167 AGQVTCVAASPHRETVFLSCSEDSRILLWDTRCPKPASQMGCNASGYLPTSLAWHPQQSE 226
Query: 339 LLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTI 398
+ G ++G+ S+ D + S H VT + +SPH LA S D L +
Sbjct: 227 IFVFGDENGSVSLVDTK----NASCTLSSAVHSQCVTRLVFSPHSVPFLASLSEDCSLAV 282
Query: 399 WDLS 402
D S
Sbjct: 283 LDSS 286
>DICTYBASE|DDB_G0276481 [details] [associations]
symbol:ercc8 "DNA excision repair protein 8"
species:44689 "Dictyostelium discoideum" [GO:0006283
"transcription-coupled nucleotide-excision repair" evidence=ISS]
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0276481 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000015 GO:GO:0006283 KO:K10570
eggNOG:NOG271357 RefSeq:XP_643081.1 ProteinModelPortal:Q551N8
STRING:Q551N8 EnsemblProtists:DDB0232366 GeneID:8620485
KEGG:ddi:DDB_G0276481 InParanoid:Q551N8 OMA:HVYETAT
ProtClustDB:CLSZ2494971 Uniprot:Q551N8
Length = 513
Score = 164 (62.8 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 36/121 (29%), Positives = 67/121 (55%)
Query: 283 VEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRL--ASCLL 340
+ +QW P ++ +F V+GN+ +WDT +G+ + +F N VN IS++++ + L+
Sbjct: 119 ISSVQWYPIDTGIFFIGGVNGNVEVWDTNLGQVS-QTFYLENC-VNSISYSQVNCTNLLI 176
Query: 341 ASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWD 400
A+ + D + D+R +S V H+ V SI+WSP + +A +S D + +WD
Sbjct: 177 AAATTDPKVRLCDMRT----NSSVHCLTGHRESVLSIKWSPFSPNLIATASKDKTIRLWD 232
Query: 401 L 401
+
Sbjct: 233 I 233
>MGI|MGI:3644472 [details] [associations]
symbol:Cdc20b "cell division cycle 20B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:3644472 Gene3D:2.130.10.10 SUPFAM:SSF50978
EMBL:AC165265 HOGENOM:HOG000195514 GeneTree:ENSGT00580000081599
EMBL:AC159207 IPI:IPI00850799 RefSeq:XP_138861.7
ProteinModelPortal:D3Z3I0 SMR:D3Z3I0 Ensembl:ENSMUST00000109244
GeneID:238896 KEGG:mmu:238896 CTD:166979 OMA:QTRVFSA
OrthoDB:EOG4JDH6N Bgee:D3Z3I0 Uniprot:D3Z3I0
Length = 519
Score = 164 (62.8 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 49/173 (28%), Positives = 82/173 (47%)
Query: 231 GHKDEGY--AIDWNPVAPGRLVSGDCNSCIHLWEPASDATW--NVDPNPFIGHAASVEDL 286
G +++ Y +DW+ LV+ + +++W + +W N+D + + +SV
Sbjct: 227 GLRNDYYLNTLDWSSQ---NLVAVALGTSVYIWN-GQNHSWIENIDLSVCCHYVSSVT-- 280
Query: 287 QWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDD 346
W E A + +G + +WD + K L + H + V +SWN C L+SGS
Sbjct: 281 -WM-REGSCLAVGTSEGEVQLWDA-ITKKQLRNLHGHLSVVGALSWNH---CTLSSGSRL 334
Query: 347 GTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
G HD+R+ + + YHK V S++WSP +G L+ D LTIW
Sbjct: 335 GRVHHHDVRVAQHRVGTL----YHKEAVCSLKWSP-DGRLLSSGCNDGLLTIW 382
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 161 (61.7 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 51/173 (29%), Positives = 85/173 (49%)
Query: 231 GHKDEGYAIDWNPVAPGRL-VSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWS 289
GHK + W+ + RL VSG + + +WE ++ + GH+ V ++
Sbjct: 112 GHKLGISDVAWS--SDSRLLVSGSDDKTLKVWELSTGKSLKT----LKGHSNYVFCCNFN 165
Query: 290 PTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTF 349
P +S++ S S D ++ IWD R GK L + AH+ V+ + +NR S L+ S S DG
Sbjct: 166 P-QSNLIVSGSFDESVRIWDVRTGK-CLKTLPAHSDPVSAVHFNRDGS-LIVSSSYDGLC 222
Query: 350 SIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLS 402
I D G + + PV+ +++SP+ G + ++ DN L +WD S
Sbjct: 223 RIWDTA---SGQCLKTLIDDDNPPVSFVKFSPN-GKYILAATLDNTLKLWDYS 271
Score = 125 (49.1 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 40/125 (32%), Positives = 59/125 (47%)
Query: 278 GHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLAS 337
GH +V +++SP + AS S D I IW GK + H ++ ++W+ S
Sbjct: 70 GHTKAVSAVKFSPN-GEWLASSSADKLIKIWGAYDGKFE-KTISGHKLGISDVAWSS-DS 126
Query: 338 CLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVS-SADNQL 396
LL SGSDD T + +L K ++ H Y V ++P S L VS S D +
Sbjct: 127 RLLVSGSDDKTLKVWELSTGKSLKTLKGHSNY----VFCCNFNPQ--SNLIVSGSFDESV 180
Query: 397 TIWDL 401
IWD+
Sbjct: 181 RIWDV 185
>UNIPROTKB|Q5DFU0 [details] [associations]
symbol:Q5DFU0 "Probable cytosolic iron-sulfur protein
assembly protein" species:6182 "Schistosoma japonicum" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 EMBL:AY813584
ProteinModelPortal:Q5DFU0 STRING:Q5DFU0 Uniprot:Q5DFU0
Length = 352
Score = 160 (61.4 bits), Expect = 7.3e-09, P = 7.3e-09
Identities = 47/187 (25%), Positives = 79/187 (42%)
Query: 220 VLNQSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGH 279
+LN + K +++ WN + SG+ + I LW +D W + H
Sbjct: 1 MLNVREVQKLKASNKRLWSLSWNHKGSVLISSGE-DRVIKLWAKCNDQLWGSSFSLPEAH 59
Query: 280 AASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSA-----LMSFKAHNADVNVISWNR 334
S+ + WSP + + AS S DG + IW SA L+S + H ++V ++W
Sbjct: 60 KKSIRCVTWSPCGTYI-ASASFDGTVTIWKISEAHSAPEMEALVSLEGHTSEVKCVAWCP 118
Query: 335 LASCLLASGSDDGTFSIHDLRLLKGGDSV--VAHFEYHKHPVTSIEWSPHEGSTLAVSSA 392
+ G D + L + V V+ + H V S+ W PH G L +S
Sbjct: 119 SGHLIATCGRDKSVW----LWEFDDEEDVQCVSVLQPHSQDVKSVAWHPH-GEVLVSTSY 173
Query: 393 DNQLTIW 399
DN++ ++
Sbjct: 174 DNKINVY 180
Score = 127 (49.8 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 55/226 (24%), Positives = 92/226 (40%)
Query: 185 CASWADTG-HVQVWDFRSHLNALAESETVAGHGAPQVLNQSPLVKFGGHKDEGYAIDWNP 243
C +W+ G ++ F + SE H AP++ LV GH E + W P
Sbjct: 65 CVTWSPCGTYIASASFDGTVTIWKISEA---HSAPEM---EALVSLEGHTSEVKCVAWCP 118
Query: 244 VAPGRLVSGDC--NSCIHLWEPASDATWNVDPNPFIG-HAASVEDLQWSPTESDVFASCS 300
G L++ C + + LWE D +V + H+ V+ + W P +V S S
Sbjct: 119 --SGHLIA-TCGRDKSVWLWE--FDDEEDVQCVSVLQPHSQDVKSVAWHP-HGEVLVSTS 172
Query: 301 VDGNIAIWDTRVGK-SALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKG 359
D I ++ + + H++ V ++ +LAS SDD + + G
Sbjct: 173 YDNKINVYREELDDWTVFAQLSGHDSTVWKAEFSPSGD-ILASCSDDLCVKLWSWEGVCG 231
Query: 360 GDS---VVAHFE-YHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDL 401
S +A YH + + WSP + LA +DN+L I+ +
Sbjct: 232 KSSSWMCIATLSGYHTRTIFDLNWSP-DSQLLASCGSDNRLCIYKM 276
>WB|WBGene00015974 [details] [associations]
symbol:C18E3.5 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0018991 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 HOGENOM:HOG000091644
OMA:HAGSVNE EMBL:FO080611 GeneTree:ENSGT00690000101787
RefSeq:NP_491325.1 ProteinModelPortal:O02097 SMR:O02097
STRING:O02097 PaxDb:O02097 EnsemblMetazoa:C18E3.5.1
EnsemblMetazoa:C18E3.5.2 GeneID:172015 KEGG:cel:CELE_C18E3.5
UCSC:C18E3.5 CTD:172015 WormBase:C18E3.5 InParanoid:O02097
NextBio:873669 Uniprot:O02097
Length = 331
Score = 159 (61.0 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 44/179 (24%), Positives = 81/179 (45%)
Query: 224 SPLVKFGGHKDEGYAIDWNPVAPGR-LVSGDCNSCIHLWEPASDATWNVDPNPFIGHAAS 282
+P + GH E Y ++ + G L S + I LW + N GH +
Sbjct: 27 APTMVLQGHGGEIYTSQFS--SDGSFLASAGYDQQIFLWNVFGECE-NFAV--LKGHKGA 81
Query: 283 VEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLAS 342
+ +++++ +S S D + +WD G S + +FK+H VN + NR ++ S
Sbjct: 82 IMEVKFN-ADSSHLVSAGTDKTVRVWDMETG-SCIRNFKSHTDIVNSVDVNRRGPQMICS 139
Query: 343 GSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDL 401
SDDGT +HD+R + + K+ T++ ++ + + DNQ+ +WD+
Sbjct: 140 ASDDGTVMVHDMRSKEAAKKFIC-----KYQQTAVTFNDAADNVIC-GGIDNQIKVWDM 192
>UNIPROTKB|B4P7Q3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7245 "Drosophila yakuba"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CM000158 OrthoDB:EOG45DV4X RefSeq:XP_002091367.1
ProteinModelPortal:B4P7Q3 STRING:B4P7Q3 EnsemblMetazoa:FBtr0258798
GeneID:6530451 KEGG:dya:Dyak_GE12280 FlyBase:FBgn0230036
Uniprot:B4P7Q3
Length = 335
Score = 159 (61.0 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 47/172 (27%), Positives = 75/172 (43%)
Query: 231 GHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSP 290
GHK + + W+P G+ + I +W + TW+ GH ++ ++QWSP
Sbjct: 12 GHKGRIWGVAWHPKGNVFASCGE-DKAIRIWSLTGN-TWSTKTILSDGHKRTIREIQWSP 69
Query: 291 TESDVFASCSVDGNIAIWDTRVGK-SALMSFKAHNADVNVISWNRLASCLLASGSDDGTF 349
AS S D AIW G+ + + H +V +SW+R LLA+ S D +
Sbjct: 70 C-GQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGG-LLATCSRDKSV 127
Query: 350 SIHDLRLLKGGDSV--VAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
I ++ G D A H V + W P + LA +S DN + ++
Sbjct: 128 WIWEVA---GDDEFECAAVLNSHTQDVKRVVWHPTK-EILASASYDNTIKMY 175
>TAIR|locus:2176897 [details] [associations]
symbol:AT5G52820 "AT5G52820" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB009055 HSSP:P16649
InterPro:IPR011044 SUPFAM:SSF50969 PRINTS:PR00319 GO:GO:0080008
EMBL:AK227330 EMBL:BT004562 IPI:IPI00528132 RefSeq:NP_200094.1
UniGene:At.29592 ProteinModelPortal:Q9FLX9 SMR:Q9FLX9 STRING:Q9FLX9
PaxDb:Q9FLX9 PRIDE:Q9FLX9 EnsemblPlants:AT5G52820.1 GeneID:835359
KEGG:ath:AT5G52820 GeneFarm:3344 TAIR:At5g52820
HOGENOM:HOG000091641 InParanoid:Q9FLX9 KO:K14855 OMA:HFTCKGH
PhylomeDB:Q9FLX9 ProtClustDB:CLSN2686131 Genevestigator:Q9FLX9
InterPro:IPR012972 Pfam:PF08154 Uniprot:Q9FLX9
Length = 473
Score = 162 (62.1 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 46/155 (29%), Positives = 72/155 (46%)
Query: 245 APGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFASCSVDGN 304
+P RLVSG + + LWEP+ GH V + +SP + AS S D +
Sbjct: 328 SPERLVSGSDDFTMFLWEPSVSKQ---PKKRLTGHQQLVNHVYFSP-DGKWIASASFDKS 383
Query: 305 IAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVV 364
+ +W+ G+ + F+ H V +SW+ S LL SGS D T I ++R K +
Sbjct: 384 VRLWNGITGQFVTV-FRGHVGPVYQVSWSA-DSRLLLSGSKDSTLKIWEIRTKKLKQDLP 441
Query: 365 AHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
H + V +++WSP +G + D L +W
Sbjct: 442 GHAD----EVFAVDWSP-DGEKVVSGGKDRVLKLW 471
Score = 135 (52.6 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 40/162 (24%), Positives = 68/162 (41%)
Query: 223 QSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAAS 282
++PL GHK+ + W+P LVSG + I W P ++ +P GH
Sbjct: 141 ETPLFTCKGHKNWVLTVAWSPDGK-HLVSGSKSGEICCWNPKKG---ELEGSPLTGHKKW 196
Query: 283 VEDLQWSPTESDV----FASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASC 338
+ + W P F + S DG+ IWD + KS ++ H V + W
Sbjct: 197 ITGISWEPVHLSSPCRRFVTSSKDGDARIWDITLKKS-IICLSGHTLAVTCVKWG--GDG 253
Query: 339 LLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWS 380
++ +GS D T + + +G ++ + H H + S+ S
Sbjct: 254 IIYTGSQDCTIKMWETT--QG--KLIRELKGHGHWINSLALS 291
>FB|FBgn0263933 [details] [associations]
symbol:ebi "ebi" species:7227 "Drosophila melanogaster"
[GO:0042058 "regulation of epidermal growth factor receptor
signaling pathway" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005525 "GTP binding" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0051726 "regulation of cell
cycle" evidence=IMP] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=TAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0042676 "compound eye cone cell fate
commitment" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0017053 "transcriptional repressor complex"
evidence=IGI;IPI] [GO:0042461 "photoreceptor cell development"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0031065 "positive regulation of histone deacetylation"
evidence=IDA] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IPI] [GO:0035220 "wing disc
development" evidence=IGI;IMP] [GO:0045747 "positive regulation of
Notch signaling pathway" evidence=IGI;IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0045572 "positive regulation of
imaginal disc growth" evidence=IGI;IMP] [GO:0022416 "chaeta
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005525 GO:GO:0017053 GO:GO:0007173 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007601 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030162 GO:GO:0007219 GO:GO:0045747
GO:GO:0003682 GO:GO:0000122 GO:GO:0022416 GO:GO:0035220
GO:GO:0007049 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045572
GO:GO:0005700 GO:GO:0042461 GO:GO:0042058 GO:GO:0031065
GO:GO:0042676 EMBL:AF146345 EMBL:AY061326 RefSeq:NP_477329.1
UniGene:Dm.3639 ProteinModelPortal:Q95RJ9 SMR:Q95RJ9 IntAct:Q95RJ9
MINT:MINT-6540401 STRING:Q95RJ9 PaxDb:Q95RJ9
EnsemblMetazoa:FBtr0078055 GeneID:33212 KEGG:dme:Dmel_CG4063
CTD:33212 FlyBase:FBgn0263933 GeneTree:ENSGT00690000102024
InParanoid:Q95RJ9 KO:K04508 OMA:NRDRCCH OrthoDB:EOG4SF7NC
PhylomeDB:Q95RJ9 GenomeRNAi:33212 NextBio:782461 Bgee:Q95RJ9
GermOnline:CG4063 Uniprot:Q95RJ9
Length = 700
Score = 164 (62.8 bits), Expect = 9.4e-09, P = 9.4e-09
Identities = 55/181 (30%), Positives = 80/181 (44%)
Query: 230 GGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWS 289
G HK +A+ WN L +G + I +W DA+ F H+A D+ W
Sbjct: 448 GQHKGPIFALKWNKCGNYILSAGVDKTTI-IW----DASTGQCTQQFAFHSAPALDVDWQ 502
Query: 290 PTESDVFASCSVDGNIAIWDTRVG-KSALMSFKAHNADVNVISWNRLASCLLASGSDDGT 348
++ FASCS D I + R+G + +FK H +VN I W LLAS SDD T
Sbjct: 503 TNQA--FASCSTDQRIHV--CRLGVNEPIKTFKGHTNEVNAIKWCPQGQ-LLASCSDDMT 557
Query: 349 FSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGST--------LAVSSADNQLTIWD 400
I + D + H + +I+WSP T LA +S D+ + +WD
Sbjct: 558 LKIWSMNR----DRCCHDLQAHSKEIYTIKWSPTGPGTNNPNTNLILASASFDSTVRLWD 613
Query: 401 L 401
+
Sbjct: 614 V 614
Score = 130 (50.8 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 47/185 (25%), Positives = 77/185 (41%)
Query: 231 GHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFI-------GHAA-- 281
GH+ E + WNP + L SG +S +W+ SDA N + N + G A
Sbjct: 353 GHESEVFICAWNP-SRDLLASGSGDSTARIWD-MSDA--NTNSNQLVLRHCIQKGGAEVP 408
Query: 282 ---SVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASC 338
V L W+ + + A+ S DG IW T G+ A + H + + WN+ +
Sbjct: 409 SNKDVTSLDWN-CDGSLLATGSYDGYARIWKTD-GRLA-STLGQHKGPIFALKWNKCGNY 465
Query: 339 LLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTI 398
+L++G D T I D F +H P ++W ++ A S D ++ +
Sbjct: 466 ILSAGVDKTTI-IWDAST----GQCTQQFAFHSAPALDVDWQTNQA--FASCSTDQRIHV 518
Query: 399 WDLSL 403
L +
Sbjct: 519 CRLGV 523
Score = 125 (49.1 bits), Expect = 0.00018, P = 0.00018
Identities = 44/166 (26%), Positives = 70/166 (42%)
Query: 238 AIDWNPVAPGRLVS-GDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVF 296
++DWN G L++ G + +W+ + H + L+W+ + +
Sbjct: 415 SLDWN--CDGSLLATGSYDGYARIWKTDGRLASTLGQ-----HKGPIFALKWNKCGNYIL 467
Query: 297 ASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRL 356
S VD IWD G+ F H+A + W + AS S D IH RL
Sbjct: 468 -SAGVDKTTIIWDASTGQCT-QQFAFHSAPALDVDWQ--TNQAFASCSTDQR--IHVCRL 521
Query: 357 LKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLS 402
G + + F+ H + V +I+W P +G LA S D L IW ++
Sbjct: 522 --GVNEPIKTFKGHTNEVNAIKWCP-QGQLLASCSDDMTLKIWSMN 564
>TAIR|locus:2087433 [details] [associations]
symbol:AT3G63460 "AT3G63460" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016020 "membrane" evidence=IDA]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006007 "glucose catabolic process" evidence=RCA]
[GO:0006499 "N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0009506 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0016020 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 HOGENOM:HOG000230582 KO:K14005
InterPro:IPR009917 Pfam:PF07304 OMA:NQPPPMM EMBL:AY099702
EMBL:BT008435 IPI:IPI00547111 RefSeq:NP_851024.1 UniGene:At.22771
UniGene:At.67091 ProteinModelPortal:Q8L611 SMR:Q8L611 IntAct:Q8L611
STRING:Q8L611 PRIDE:Q8L611 ProMEX:Q8L611 EnsemblPlants:AT3G63460.1
GeneID:825521 KEGG:ath:AT3G63460 TAIR:At3g63460 InParanoid:Q8L611
PhylomeDB:Q8L611 ProtClustDB:CLSN2680494 ArrayExpress:Q8L611
Genevestigator:Q8L611 Uniprot:Q8L611
Length = 1104
Score = 158 (60.7 bits), Expect = 9.6e-09, Sum P(2) = 9.6e-09
Identities = 58/228 (25%), Positives = 97/228 (42%)
Query: 245 APGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAA----SVEDLQWSPTESDVFASCS 300
A G + G + I LW P S N +GH + V L+++ S++ AS +
Sbjct: 83 ALGLIAGGLVDGNIDLWNPLSLIGSQPSENALVGHLSVHKGPVRGLEFNAISSNLLASGA 142
Query: 301 VDGNIAIWD----TRVGKSALM--SFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDL 354
DG I IWD + L+ S A +++ ISWNR +LAS S +GT I DL
Sbjct: 143 DDGEICIWDLLKPSEPSHFPLLKGSGSATQGEISFISWNRKVQQILASTSYNGTTVIWDL 202
Query: 355 RLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQ---LTIWDLSLXXXXXXXX 411
R K ++ + + + ++W+P+ + + V+S D+ L +WD+
Sbjct: 203 RKQK---PIINFADSVRRRCSVLQWNPNVTTQIMVASDDDSSPTLKLWDMR---NIMSPV 256
Query: 412 XXXXXTREQVNAPEDLPPQLLFIHQGQKDLKELHWHTQVPGMIVSTAA 459
+ V A E P ++ KD + + W T ++ A
Sbjct: 257 REFTGHQRGVIAMEWCPSDSSYLLTCAKDNRTICWDTNTAEIVAELPA 304
Score = 156 (60.0 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 43/175 (24%), Positives = 76/175 (43%)
Query: 232 HKDEGYAIDWNPVAPGRLVSG--DCNSCI-HLWEPASDATWNVDPNPFIGHAASVEDLQW 288
HK +++N ++ L SG D CI L +P+ + + + + + W
Sbjct: 121 HKGPVRGLEFNAISSNLLASGADDGEICIWDLLKPSEPSHFPLLKGSGSATQGEISFISW 180
Query: 289 SPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWN-RLASCLLASGSDDG 347
+ + AS S +G IWD R K + + +V+ WN + + ++ + DD
Sbjct: 181 NRKVQQILASTSYNGTTVIWDLRKQKPIINFADSVRRRCSVLQWNPNVTTQIMVASDDDS 240
Query: 348 --TFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWD 400
T + D+R + S V F H+ V ++EW P + S L + DN+ WD
Sbjct: 241 SPTLKLWDMRNIM---SPVREFTGHQRGVIAMEWCPSDSSYLLTCAKDNRTICWD 292
Score = 56 (24.8 bits), Expect = 9.6e-09, Sum P(2) = 9.6e-09
Identities = 7/19 (36%), Positives = 16/19 (84%)
Query: 443 ELHWHTQVPGMIVSTAADG 461
++HW+ ++PG+I +++ DG
Sbjct: 311 DVHWYPKIPGVISASSFDG 329
>UNIPROTKB|B4DP38 [details] [associations]
symbol:WDR77 "cDNA FLJ55120, moderately similar to
Methylosome protein 50" species:9606 "Homo sapiens" [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005794 Gene3D:2.130.10.10
EMBL:AL390195 HOGENOM:HOG000035094 HOVERGEN:HBG052458
UniGene:Hs.204773 HGNC:HGNC:29652 EMBL:AK298179 IPI:IPI00908660
SMR:B4DP38 STRING:B4DP38 Ensembl:ENST00000411751 UCSC:uc010owe.2
Uniprot:B4DP38
Length = 278
Score = 156 (60.0 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 48/157 (30%), Positives = 69/157 (43%)
Query: 252 GDCNSCIHLWEPASDATWNVDPNPFIG----HAASVEDLQWSPTESDVFASCSVDGNIAI 307
G C++ + +D TW + + HAA V + SP + VF SCS D I +
Sbjct: 71 GFCSAGVQTEAGVADLTWVGERGILVASDSAHAAQVTCVAASPHKDSVFLSCSEDNRILL 130
Query: 308 WDTRVGKSAL-MSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAH 366
WDTR K A + A ++W+ S + G ++GT S+ D + S V
Sbjct: 131 WDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTK----STSCVLS 186
Query: 367 FEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLSL 403
H VT + +SPH LA S D L + D SL
Sbjct: 187 SAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSL 223
>UNIPROTKB|B3NQR5 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7220 "Drosophila erecta"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH954179 OrthoDB:EOG45DV4X RefSeq:XP_001975575.1
ProteinModelPortal:B3NQR5 EnsemblMetazoa:FBtr0142445 GeneID:6549053
KEGG:der:Dere_GG22391 FlyBase:FBgn0114563 Uniprot:B3NQR5
Length = 335
Score = 158 (60.7 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 46/172 (26%), Positives = 76/172 (44%)
Query: 231 GHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSP 290
GHK + + W+P G+ + I +W + +TW+ GH ++ +++WSP
Sbjct: 12 GHKGRIWGVAWHPKGNVFASCGE-DKAIRIWS-LTGSTWSTKTILSDGHKRTIREIRWSP 69
Query: 291 TESDVFASCSVDGNIAIWDTRVGK-SALMSFKAHNADVNVISWNRLASCLLASGSDDGTF 349
AS S D AIW G+ + + H +V +SW+R LLA+ S D +
Sbjct: 70 C-GQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGG-LLATCSRDKSV 127
Query: 350 SIHDLRLLKGGDSV--VAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
I ++ G D A H V + W P + LA +S DN + ++
Sbjct: 128 WIWEVA---GDDEFECAAVLNSHTQDVKRVVWHPTK-EVLASASYDNTIKMY 175
>UNIPROTKB|Q5BJ90 [details] [associations]
symbol:wdr12 "Ribosome biogenesis protein wdr12"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000463
"maturation of LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0000466
"maturation of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0005654
"nucleoplasm" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0008283 "cell proliferation" evidence=ISS] [GO:0030687
"preribosome, large subunit precursor" evidence=ISS] [GO:0070545
"PeBoW complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030687 GO:GO:0070545
GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154
KO:K14863 HOGENOM:HOG000264464 HAMAP:MF_03029 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:BC091577 RefSeq:NP_001025628.1 UniGene:Str.36786 HSSP:Q02793
ProteinModelPortal:Q5BJ90 STRING:Q5BJ90 Ensembl:ENSXETT00000047773
GeneID:595016 KEGG:xtr:595016 Xenbase:XB-GENE-945426 OMA:DNSIGFW
Bgee:Q5BJ90 Uniprot:Q5BJ90
Length = 423
Score = 163 (62.4 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 45/123 (36%), Positives = 59/123 (47%)
Query: 278 GHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLAS 337
GH+ +V + WS + D S S D NI IWD G + S A N N IS++ L+
Sbjct: 255 GHSEAVSSVLWS--DVDEICSASWDHNIKIWDVETG--TVKSTLAGNKVFNCISYSPLSQ 310
Query: 338 CLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLT 397
LASGS D + D R K G V+ H VTS++WSP L S D +
Sbjct: 311 -RLASGSTDRHIRLWDPRS-KDGSLVLCSLTSHTGWVTSVKWSPSHEQQLVSGSLDKLVK 368
Query: 398 IWD 400
+WD
Sbjct: 369 LWD 371
Score = 144 (55.7 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 35/112 (31%), Positives = 56/112 (50%)
Query: 239 IDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFAS 298
I ++P++ RL SG + I LW+P S ++ H V ++WSP+ S
Sbjct: 303 ISYSPLSQ-RLASGSTDRHIRLWDPRSK-DGSLVLCSLTSHTGWVTSVKWSPSHEQQLVS 360
Query: 299 CSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFS 350
S+D + +WDTR K+ L AH+ V + W A +L+ GSD+ +S
Sbjct: 361 GSLDKLVKLWDTRSCKAPLYDLAAHSDKVLSVDWTD-AGLILSGGSDNKLYS 411
Score = 120 (47.3 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 46/178 (25%), Positives = 72/178 (40%)
Query: 221 LNQSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHA 280
L + P+V GH + ++ W+ V S D N I +W D + G+
Sbjct: 245 LTRIPIVTLSGHSEAVSSVLWSDVDEICSASWDHN--IKIW----DVETGTVKSTLAGNK 298
Query: 281 ASVEDLQWSPTESDVFASCSVDGNIAIWDTRV--GKSALMSFKAHNADVNVISWNRLASC 338
+ +SP S AS S D +I +WD R G L S +H V + W+
Sbjct: 299 V-FNCISYSPL-SQRLASGSTDRHIRLWDPRSKDGSLVLCSLTSHTGWVTSVKWSPSHEQ 356
Query: 339 LLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQL 396
L SGS D + D R K + + H V S++W+ + + +DN+L
Sbjct: 357 QLVSGSLDKLVKLWDTRSCK---APLYDLAAHSDKVLSVDWT--DAGLILSGGSDNKL 409
Score = 38 (18.4 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 11 TQRRPKERTRTQKKG 25
T RP+++ +T+K G
Sbjct: 230 TSDRPRKKQKTEKMG 244
>DICTYBASE|DDB_G0287259 [details] [associations]
symbol:cdh1 "cdc20/fizzy domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051301 "cell
division" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 dictyBase:DDB_G0287259 GO:GO:0005634
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GenomeReviews:CM000154_GR GO:GO:0016567 EMBL:AAFI02000099
RefSeq:XP_637334.1 ProteinModelPortal:Q54KM3 STRING:Q54KM3
EnsemblProtists:DDB0266709 GeneID:8626032 KEGG:ddi:DDB_G0287259
KO:K03364 OMA:DESHLAY Uniprot:Q54KM3
Length = 754
Score = 163 (62.4 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 46/173 (26%), Positives = 76/173 (43%)
Query: 233 KDEGYA--IDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSP 290
KD+ Y IDW+ +++ ++ ++LW T V + V + W
Sbjct: 411 KDDFYLNLIDWSS---HNILAVGLDTSVYLWNAT---TSQVSKLCEMESGQPVSSVGWIQ 464
Query: 291 TESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFS 350
A DG ++IWD K + + HN VN ++WN + +L+SG D
Sbjct: 465 RGGIHLAIGGTDGVVSIWDVNK-KKKIRELQGHNTRVNALAWN---NHILSSGGKDKVIL 520
Query: 351 IHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLSL 403
HD+R ++ H+H + ++WSP +G LA DN L +WD S+
Sbjct: 521 HHDVR--DCSNNYTNRLVGHRHEICGLKWSP-DGQQLASGGNDNLLNVWDHSM 570
>UNIPROTKB|B3MC74 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7217 "Drosophila ananassae"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH902619 OrthoDB:EOG45DV4X RefSeq:XP_001959352.1
ProteinModelPortal:B3MC74 STRING:B3MC74 EnsemblMetazoa:FBtr0116785
GeneID:6494943 KEGG:dan:Dana_GF12085 FlyBase:FBgn0089124
InParanoid:B3MC74 Uniprot:B3MC74
Length = 335
Score = 157 (60.3 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 47/172 (27%), Positives = 75/172 (43%)
Query: 231 GHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSP 290
GHK + + W+P G+ + I +W + TW GH ++ +++WSP
Sbjct: 12 GHKGRIWGVAWHPKGNVFASCGE-DKAIRIWS-LNGNTWTTKTILSDGHKRTIREIRWSP 69
Query: 291 TESDVFASCSVDGNIAIWDTRVGK-SALMSFKAHNADVNVISWNRLASCLLASGSDDGTF 349
AS S DG AIW G+ + + H +V +SW+R LLA+ S D +
Sbjct: 70 C-GQYLASASFDGTTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGG-LLATCSRDKSV 127
Query: 350 SIHDLRLLKGGDSV--VAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
I ++ G D A H V + W P + LA +S DN + ++
Sbjct: 128 WIWEVA---GDDEFECAAVLNPHTQDVKRVVWHPTK-ELLASASYDNTIKMF 175
Score = 140 (54.3 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 42/129 (32%), Positives = 58/129 (44%)
Query: 278 GHAASVEDLQWSPTESDVFASCSVDGNIAIW----DTRVGKSALMSFKAHNADVNVISWN 333
GH + + W P + +VFASC D I IW +T K+ L H + I W+
Sbjct: 12 GHKGRIWGVAWHP-KGNVFASCGEDKAIRIWSLNGNTWTTKTILSD--GHKRTIREIRWS 68
Query: 334 RLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSAD 393
LAS S DGT +I G A E H++ V S+ WS G LA S D
Sbjct: 69 PCGQ-YLASASFDGTTAIWSKS--SGEFECNATLEGHENEVKSVSWS-RSGGLLATCSRD 124
Query: 394 NQLTIWDLS 402
+ IW+++
Sbjct: 125 KSVWIWEVA 133
>TAIR|locus:2090792 [details] [associations]
symbol:LWD2 "AT3G26640" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0043153 "entrainment of
circadian clock by photoperiod" evidence=IEP] [GO:0048573
"photoperiodism, flowering" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0048511 GO:GO:0048573
GO:GO:0043153 eggNOG:NOG314410 HOGENOM:HOG000260968 EMBL:X98130
EMBL:AB026648 ProtClustDB:CLSN2682478 EMBL:X97488 EMBL:BT004214
EMBL:AY086141 EMBL:BT020361 IPI:IPI00540911 RefSeq:NP_189298.1
UniGene:At.19781 ProteinModelPortal:Q38960 SMR:Q38960 STRING:Q38960
PaxDb:Q38960 PRIDE:Q38960 EnsemblPlants:AT3G26640.1 GeneID:822276
KEGG:ath:AT3G26640 GeneFarm:2845 TAIR:At3g26640 InParanoid:Q38960
OMA:HSSSHIC PhylomeDB:Q38960 Genevestigator:Q38960 Uniprot:Q38960
Length = 346
Score = 157 (60.3 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 42/168 (25%), Positives = 76/168 (45%)
Query: 238 AIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFA 297
+ DWN P R+ + ++ +W+ + VD I H V D+ W VFA
Sbjct: 140 SFDWNEAEPRRIGTSSIDTTCTIWDIEREV---VDTQ-LIAHDKEVYDIAWGGV--GVFA 193
Query: 298 SCSVDGNIAIWDTRVGKSALMSFKAHNADVNVI--SWNRLASCLLASG-SDDGTFSIHDL 354
S S DG++ ++D R + + + +++ ++ SWN+ +A+ + D+
Sbjct: 194 SVSEDGSVRVFDLRDKEHSTIIYESGEPSTPLVRLSWNKQDPRYMATVIMGSAKIVVLDI 253
Query: 355 RLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLS 402
R V + H+ V +I W+PH S + + D+Q IWD+S
Sbjct: 254 RFPA---LPVVELQRHQASVNAIAWAPHSSSHICSAGDDSQALIWDIS 298
>UNIPROTKB|Q40687 [details] [associations]
symbol:LOC_Os03g46650 "Guanine nucleotide-binding protein
subunit beta" species:39947 "Oryza sativa Japonica Group"
[GO:0005515 "protein binding" evidence=IPI] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=IEP;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005783 GO:GO:0005886 GO:GO:0009723
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0048527 GO:GO:0009817 GO:GO:0009845
GO:GO:0009887 GO:GO:0004871 GO:GO:0010154 GO:GO:0030968
GO:GO:0009867 PRINTS:PR00319 GO:GO:0080008 HOGENOM:HOG000176356
OMA:CMLWDIE InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:X89737
EMBL:AC133930 PIR:T03765 ProteinModelPortal:Q40687 IntAct:Q40687
STRING:Q40687 EnsemblPlants:LOC_Os03g46650.1 Gramene:Q40687
Uniprot:Q40687
Length = 380
Score = 157 (60.3 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 52/181 (28%), Positives = 83/181 (45%)
Query: 231 GHKDEGYAIDWNPVAPGRLV--SGDCNSCIHLWEPASDATWNVDPNPF-IGHAASVEDLQ 287
GHK + + P RL+ SGD +C+ LW+ + ++ F GH A V L
Sbjct: 155 GHKGYVSSCQYVPDQETRLITSSGD-QTCV-LWDVTTGQRISIFGGEFPSGHTADVLSLS 212
Query: 288 WSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDG 347
+ + S++F S S D + +WD R+ A+ ++ H D+N + + +GSDDG
Sbjct: 213 INSSNSNMFVSGSCDATVRLWDIRIASRAVRTYHGHEGDINSVKFFPDGQ-RFGTGSDDG 271
Query: 348 TFSIHDLRLLKGGDSVVAHFEYHKH----P-VTSIEWSPHEGSTLAVSSADNQLTIWDLS 402
T + D+R G V E ++ P VTSI +S G L ++ +WD
Sbjct: 272 TCRLFDVRT--GHQLQVYSREPDRNDNELPTVTSIAFSI-SGRLLFAGYSNGDCYVWDTL 328
Query: 403 L 403
L
Sbjct: 329 L 329
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 162 (62.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 48/171 (28%), Positives = 83/171 (48%)
Query: 231 GHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSP 290
GH ++ ++ + G + +G + I LW+ +A V GH ++ + + P
Sbjct: 57 GHSSGIDSVTFD-ASEGLVAAGAASGTIKLWD-LEEA--KV-VRTLTGHRSNCVSVNFHP 111
Query: 291 TESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFS 350
+ FAS S+D N+ IWD R K + ++K H VNV+ + ++ SG +D
Sbjct: 112 F-GEFFASGSLDTNLKIWDIRK-KGCIHTYKGHTRGVNVLRFTPDGRWIV-SGGEDNVVK 168
Query: 351 IHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDL 401
+ DL K ++ F+ H+ + S+++ PHE LA SAD + WDL
Sbjct: 169 VWDLTAGK----LLHEFKSHEGKIQSLDFHPHE-FLLATGSADKTVKFWDL 214
Score = 126 (49.4 bits), Expect = 0.00017, P = 0.00017
Identities = 35/127 (27%), Positives = 63/127 (49%)
Query: 276 FIGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGK-SALMSFKAHNADVNVISWNR 334
F+ H+A+V L+ S V + D + +W +GK +A++S H++ ++ ++++
Sbjct: 12 FVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLW--AIGKPNAILSLYGHSSGIDSVTFDA 69
Query: 335 LASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADN 394
+ L+A+G+ GT + DL K VV H+ S+ + P G A S D
Sbjct: 70 -SEGLVAAGAASGTIKLWDLEEAK----VVRTLTGHRSNCVSVNFHPF-GEFFASGSLDT 123
Query: 395 QLTIWDL 401
L IWD+
Sbjct: 124 NLKIWDI 130
>TAIR|locus:2123929 [details] [associations]
symbol:VIP3 "AT4G29830" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0009910 "negative regulation
of flower development" evidence=IGI;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0080008 "Cul4-RING ubiquitin ligase
complex" evidence=IPI] [GO:0010452 "histone H3-K36 methylation"
evidence=IMP] [GO:0051568 "histone H3-K4 methylation" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AL050352 EMBL:AL161575
GO:GO:0009910 GO:GO:0051568 HSSP:P16649 GO:GO:0080008 GO:GO:0010452
UniGene:At.23602 UniGene:At.72983 HOGENOM:HOG000036765 KO:K12602
OMA:PPSEVWG EMBL:BT008333 IPI:IPI00518529 PIR:T08544
RefSeq:NP_194712.1 SMR:Q9SZQ5 IntAct:Q9SZQ5 STRING:Q9SZQ5
EnsemblPlants:AT4G29830.1 GeneID:829105 KEGG:ath:AT4G29830
TAIR:At4g29830 InParanoid:Q9SZQ5 ProtClustDB:CLSN2685393
Genevestigator:Q9SZQ5 Uniprot:Q9SZQ5
Length = 321
Score = 155 (59.6 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 49/179 (27%), Positives = 88/179 (49%)
Query: 235 EGYAIDWNPVAPGRLVSGDCNSCIHLWEPAS---DATWNVD----PNPFIGHAAS--VED 285
E + + + P V+G ++ + LW+ AS +T ++ P P ++ V
Sbjct: 104 EVWGMQFEPKGTILAVAGGSSASVKLWDTASWRLISTLSIPRPDAPKPSDKTSSKKFVLS 163
Query: 286 LQWSPTESDVFASCSVDGNIAIWDTRVGKSALM-SFKAHNADVNVISWNRLASCLLASGS 344
+ WSP + A S+DG I ++D V +S L+ + HN V + ++ + +L SGS
Sbjct: 164 VAWSPNGKRL-ACGSMDGTICVFD--VDRSKLLHQLEGHNMPVRSLVFSPVDPRVLFSGS 220
Query: 345 DDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLSL 403
DDG ++HD G +++ H V S++ SP +G +A S+D + +WDL +
Sbjct: 221 DDGHVNMHDAE----GKTLLGSMSGHTSWVLSVDASP-DGGAIATGSSDRTVRLWDLKM 274
>POMBASE|SPAC25H1.06 [details] [associations]
symbol:pcf3 "CAF assembly factor (CAF-1) complex subunit
C, Pcf3" species:4896 "Schizosaccharomyces pombe" [GO:0000790
"nuclear chromatin" evidence=IC] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006335 "DNA replication-dependent nucleosome assembly"
evidence=IC] [GO:0033186 "CAF-1 complex" evidence=IDA] [GO:0035067
"negative regulation of histone acetylation" evidence=IMP]
[GO:0043596 "nuclear replication fork" evidence=IDA] [GO:0051574
"positive regulation of histone H3-K9 methylation" evidence=IMP]
[GO:0070829 "heterochromatin maintenance" evidence=IMP] [GO:0090053
"positive regulation of chromatin silencing at centromere"
evidence=IMP] [GO:0090055 "positive regulation of chromatin
silencing at silent mating-type cassette" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC25H1.06 GO:GO:0005829 EMBL:CU329670 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0000790
GO:GO:0043596 GO:GO:0006335 GO:GO:0035067 GO:GO:0051574
GO:GO:0033186 KO:K10752 InterPro:IPR022052 Pfam:PF12265
GO:GO:0090055 HOGENOM:HOG000160330 OrthoDB:EOG44TSHP GO:GO:0070829
GO:GO:0090053 PIR:T38386 RefSeq:NP_593810.1
ProteinModelPortal:Q9Y825 STRING:Q9Y825 EnsemblFungi:SPAC25H1.06.1
GeneID:2541656 KEGG:spo:SPAC25H1.06 OMA:MESITEK NextBio:20802749
Uniprot:Q9Y825
Length = 408
Score = 157 (60.3 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 65/252 (25%), Positives = 113/252 (44%)
Query: 164 RKVAHQGCVNRIRAMSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGHGAPQVLNQ 223
+++ H G VNR+R M QNP+I A+ + G+ ++D R+ ++ E +
Sbjct: 126 QRILHNGDVNRVRHMPQNPNIIATMSSCGNAYIFD-RTKYTSMPAEEFL----------- 173
Query: 224 SPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWE--PASDATWNVDP-NPFIGHA 280
P + GHK EG+ + WN RLV+ +S I W+ S T + P F
Sbjct: 174 -PNISLIGHKKEGFGLSWNRQQNCRLVTAANDSKILEWDLNNFSRDTRCLTPVKDFHYDD 232
Query: 281 ASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLL 340
+ V D+++ P ++++ + + +G I D R+ ++ + KA N +V N + L
Sbjct: 233 SPVNDVEYHPHHTNLYIAVNDNGIAFICDNRLQQTCSKTVKASNPLFSV-RHNPSIATLF 291
Query: 341 ASGSDDGTFSIHDLRLL-KGGDSVVAHFEYHKHPV--------TSIEWS-PHEGSTLAVS 390
A GS+ + DLR L K + ++ V TS+ WS H G VS
Sbjct: 292 ALGSEQD-LQLWDLRNLNKSVFNTSEDLSDNRLKVPSRLTLGGTSLSWSWRHSGRI--VS 348
Query: 391 SADNQLTIWDLS 402
+ +W+ +
Sbjct: 349 ACQEYCYVWNFN 360
>UNIPROTKB|B4KTK4 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7230 "Drosophila mojavensis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH933808 OrthoDB:EOG45DV4X RefSeq:XP_002005652.1
ProteinModelPortal:B4KTK4 EnsemblMetazoa:FBtr0169681 GeneID:6579773
KEGG:dmo:Dmoj_GI18956 FlyBase:FBgn0141695 InParanoid:B4KTK4
Uniprot:B4KTK4
Length = 331
Score = 155 (59.6 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 47/171 (27%), Positives = 74/171 (43%)
Query: 231 GHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSP 290
GHK + + W+P G+ + I +W S TW GH ++ +++WSP
Sbjct: 12 GHKGRIWGVAWHPKGNSFASCGE-DKAIRIWS-LSGNTWTTKTILSDGHKRTIREVRWSP 69
Query: 291 TESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFS 350
+ AS S D AIW + L + H +V +SW+R LLA+ S D +
Sbjct: 70 C-GEYLASASFDATTAIWSKHECTATL---EGHENEVKSVSWSRSGG-LLATCSRDKSVW 124
Query: 351 IHDLRLLKGGDSV--VAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
I ++ G D A H V + W P + LA +S DN + ++
Sbjct: 125 IWEVA---GDDEFECAAVLNAHSQDVKRVVWHPTK-EILASASYDNTIKMY 171
>UNIPROTKB|B4LJT7 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7244 "Drosophila virilis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH940648 OMA:SWKCVCT OrthoDB:EOG45DV4X
RefSeq:XP_002049403.1 ProteinModelPortal:B4LJT7 STRING:B4LJT7
EnsemblMetazoa:FBtr0237487 GeneID:6626094 KEGG:dvi:Dvir_GJ21562
FlyBase:FBgn0208682 InParanoid:B4LJT7 Uniprot:B4LJT7
Length = 331
Score = 155 (59.6 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 47/171 (27%), Positives = 74/171 (43%)
Query: 231 GHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSP 290
GHK + + W+P G+ + I +W S TW GH ++ +++WSP
Sbjct: 12 GHKGRIWGVAWHPKGNSFASCGE-DKAIRIWS-LSGNTWTTKTILSDGHKRTIREVRWSP 69
Query: 291 TESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFS 350
+ AS S D AIW + L + H +V +SW+R LLA+ S D +
Sbjct: 70 C-GEYLASASFDATTAIWSKHECTATL---EGHENEVKSVSWSRSGG-LLATCSRDKSVW 124
Query: 351 IHDLRLLKGGDSV--VAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
I ++ G D A H V + W P + LA +S DN + ++
Sbjct: 125 IWEVA---GDDEFECAAVLNAHSQDVKRVVWHPTK-EVLASASYDNTIKMF 171
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 155 (59.6 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 52/190 (27%), Positives = 89/190 (46%)
Query: 213 AGHGAPQVLNQSPLVKF--GGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWN 270
A P + + +KF GH ++ ++P L S + I +W A D +
Sbjct: 23 ATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEW-LASSSADKLIKIWG-AYDGKFE 80
Query: 271 VDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVI 330
GH + D+ WS ++S++ S S D + IWD GK L + K H+ V
Sbjct: 81 ---KTISGHKLGISDVAWS-SDSNLLVSASDDKTLKIWDVSSGK-CLKTLKGHSNYVFCC 135
Query: 331 SWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVS 390
++N ++ L+ SGS D + I D++ K ++ AH + PV+++ ++ +GS + S
Sbjct: 136 NFNPQSN-LIVSGSFDESVRIWDVKTGKCLKTLPAHSD----PVSAVHFN-RDGSLIVSS 189
Query: 391 SADNQLTIWD 400
S D IWD
Sbjct: 190 SYDGLCRIWD 199
Score = 153 (58.9 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 48/172 (27%), Positives = 82/172 (47%)
Query: 231 GHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSP 290
GHK + W+ + LVS + + +W+ +S GH+ V ++P
Sbjct: 85 GHKLGISDVAWSSDS-NLLVSASDDKTLKIWDVSSGKCLKT----LKGHSNYVFCCNFNP 139
Query: 291 TESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFS 350
+S++ S S D ++ IWD + GK L + AH+ V+ + +NR S L+ S S DG
Sbjct: 140 -QSNLIVSGSFDESVRIWDVKTGK-CLKTLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCR 196
Query: 351 IHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLS 402
I D G + + PV+ +++SP+ G + ++ DN L +WD S
Sbjct: 197 IWDTA---SGQCLKTLIDDDNPPVSFVKFSPN-GKYILAATLDNTLKLWDYS 244
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 155 (59.6 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 52/190 (27%), Positives = 89/190 (46%)
Query: 213 AGHGAPQVLNQSPLVKF--GGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWN 270
A P + + +KF GH ++ ++P L S + I +W A D +
Sbjct: 23 ATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEW-LASSSADKLIKIWG-AYDGKFE 80
Query: 271 VDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVI 330
GH + D+ WS ++S++ S S D + IWD GK L + K H+ V
Sbjct: 81 ---KTISGHKLGISDVAWS-SDSNLLVSASDDKTLKIWDVSSGK-CLKTLKGHSNYVFCC 135
Query: 331 SWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVS 390
++N ++ L+ SGS D + I D++ K ++ AH + PV+++ ++ +GS + S
Sbjct: 136 NFNPQSN-LIVSGSFDESVRIWDVKTGKCLKTLPAHSD----PVSAVHFN-RDGSLIVSS 189
Query: 391 SADNQLTIWD 400
S D IWD
Sbjct: 190 SYDGLCRIWD 199
Score = 153 (58.9 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 48/172 (27%), Positives = 82/172 (47%)
Query: 231 GHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSP 290
GHK + W+ + LVS + + +W+ +S GH+ V ++P
Sbjct: 85 GHKLGISDVAWSSDS-NLLVSASDDKTLKIWDVSSGKCLKT----LKGHSNYVFCCNFNP 139
Query: 291 TESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFS 350
+S++ S S D ++ IWD + GK L + AH+ V+ + +NR S L+ S S DG
Sbjct: 140 -QSNLIVSGSFDESVRIWDVKTGK-CLKTLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCR 196
Query: 351 IHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLS 402
I D G + + PV+ +++SP+ G + ++ DN L +WD S
Sbjct: 197 IWDTA---SGQCLKTLIDDDNPPVSFVKFSPN-GKYILAATLDNTLKLWDYS 244
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 155 (59.6 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 52/190 (27%), Positives = 89/190 (46%)
Query: 213 AGHGAPQVLNQSPLVKF--GGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWN 270
A P + + +KF GH ++ ++P L S + I +W A D +
Sbjct: 23 ATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEW-LASSSADKLIKIWG-AYDGKFE 80
Query: 271 VDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVI 330
GH + D+ WS ++S++ S S D + IWD GK L + K H+ V
Sbjct: 81 ---KTISGHKLGISDVAWS-SDSNLLVSASDDKTLKIWDVSSGK-CLKTLKGHSNYVFCC 135
Query: 331 SWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVS 390
++N ++ L+ SGS D + I D++ K ++ AH + PV+++ ++ +GS + S
Sbjct: 136 NFNPQSN-LIVSGSFDESVRIWDVKTGKCLKTLPAHSD----PVSAVHFN-RDGSLIVSS 189
Query: 391 SADNQLTIWD 400
S D IWD
Sbjct: 190 SYDGLCRIWD 199
Score = 153 (58.9 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 48/172 (27%), Positives = 82/172 (47%)
Query: 231 GHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSP 290
GHK + W+ + LVS + + +W+ +S GH+ V ++P
Sbjct: 85 GHKLGISDVAWSSDS-NLLVSASDDKTLKIWDVSSGKCLKT----LKGHSNYVFCCNFNP 139
Query: 291 TESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFS 350
+S++ S S D ++ IWD + GK L + AH+ V+ + +NR S L+ S S DG
Sbjct: 140 -QSNLIVSGSFDESVRIWDVKTGK-CLKTLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCR 196
Query: 351 IHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLS 402
I D G + + PV+ +++SP+ G + ++ DN L +WD S
Sbjct: 197 IWDTA---SGQCLKTLIDDDNPPVSFVKFSPN-GKYILAATLDNTLKLWDYS 244
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 155 (59.6 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 51/184 (27%), Positives = 86/184 (46%)
Query: 217 APQVLNQSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPF 276
AP N + GH ++ ++P L S + I +W A D +
Sbjct: 29 APVKPNYTLKFTLAGHTKAVSSVKFSPNGEW-LASSSADKLIKIWG-AYDGKFE---KTI 83
Query: 277 IGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLA 336
GH + D+ WS ++S++ S S D + IWD GK L + K H+ V ++N +
Sbjct: 84 SGHKLGISDVAWS-SDSNLLVSASDDKTLKIWDVSSGK-CLKTLKGHSNYVFCCNFNPQS 141
Query: 337 SCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQL 396
+ L+ SGS D + I D++ K ++ AH + PV+++ ++ +GS + SS D
Sbjct: 142 N-LIVSGSFDESVRIWDVKTGKCLKTLPAHSD----PVSAVHFN-RDGSLIVSSSYDGLC 195
Query: 397 TIWD 400
IWD
Sbjct: 196 RIWD 199
Score = 153 (58.9 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 48/172 (27%), Positives = 82/172 (47%)
Query: 231 GHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSP 290
GHK + W+ + LVS + + +W+ +S GH+ V ++P
Sbjct: 85 GHKLGISDVAWSSDS-NLLVSASDDKTLKIWDVSSGKCLKT----LKGHSNYVFCCNFNP 139
Query: 291 TESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFS 350
+S++ S S D ++ IWD + GK L + AH+ V+ + +NR S L+ S S DG
Sbjct: 140 -QSNLIVSGSFDESVRIWDVKTGK-CLKTLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCR 196
Query: 351 IHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLS 402
I D G + + PV+ +++SP+ G + ++ DN L +WD S
Sbjct: 197 IWDTA---SGQCLKTLIDDDNPPVSFVKFSPN-GKYILAATLDNTLKLWDYS 244
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 155 (59.6 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 52/190 (27%), Positives = 89/190 (46%)
Query: 213 AGHGAPQVLNQSPLVKF--GGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWN 270
A P + + +KF GH ++ ++P L S + I +W A D +
Sbjct: 23 ATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEW-LASSSADKLIKIWG-AYDGKFE 80
Query: 271 VDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVI 330
GH + D+ WS ++S++ S S D + IWD GK L + K H+ V
Sbjct: 81 ---KTISGHKLGISDVAWS-SDSNLLVSASDDKTLKIWDVSSGK-CLKTLKGHSNYVFCC 135
Query: 331 SWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVS 390
++N ++ L+ SGS D + I D++ K ++ AH + PV+++ ++ +GS + S
Sbjct: 136 NFNPQSN-LIVSGSFDESVRIWDVKTGKCLKTLPAHSD----PVSAVHFN-RDGSLIVSS 189
Query: 391 SADNQLTIWD 400
S D IWD
Sbjct: 190 SYDGLCRIWD 199
Score = 153 (58.9 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 48/172 (27%), Positives = 82/172 (47%)
Query: 231 GHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSP 290
GHK + W+ + LVS + + +W+ +S GH+ V ++P
Sbjct: 85 GHKLGISDVAWSSDS-NLLVSASDDKTLKIWDVSSGKCLKT----LKGHSNYVFCCNFNP 139
Query: 291 TESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFS 350
+S++ S S D ++ IWD + GK L + AH+ V+ + +NR S L+ S S DG
Sbjct: 140 -QSNLIVSGSFDESVRIWDVKTGK-CLKTLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCR 196
Query: 351 IHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLS 402
I D G + + PV+ +++SP+ G + ++ DN L +WD S
Sbjct: 197 IWDTA---SGQCLKTLIDDDNPPVSFVKFSPN-GKYILAATLDNTLKLWDYS 244
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 155 (59.6 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 52/190 (27%), Positives = 89/190 (46%)
Query: 213 AGHGAPQVLNQSPLVKF--GGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWN 270
A P + + +KF GH ++ ++P L S + I +W A D +
Sbjct: 23 ATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEW-LASSSADKLIKIWG-AYDGKFE 80
Query: 271 VDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVI 330
GH + D+ WS ++S++ S S D + IWD GK L + K H+ V
Sbjct: 81 ---KTISGHKLGISDVAWS-SDSNLLVSASDDKTLKIWDVSSGK-CLKTLKGHSNYVFCC 135
Query: 331 SWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVS 390
++N ++ L+ SGS D + I D++ K ++ AH + PV+++ ++ +GS + S
Sbjct: 136 NFNPQSN-LIVSGSFDESVRIWDVKTGKCLKTLPAHSD----PVSAVHFN-RDGSLIVSS 189
Query: 391 SADNQLTIWD 400
S D IWD
Sbjct: 190 SYDGLCRIWD 199
Score = 153 (58.9 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 48/172 (27%), Positives = 82/172 (47%)
Query: 231 GHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSP 290
GHK + W+ + LVS + + +W+ +S GH+ V ++P
Sbjct: 85 GHKLGISDVAWSSDS-NLLVSASDDKTLKIWDVSSGKCLKT----LKGHSNYVFCCNFNP 139
Query: 291 TESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFS 350
+S++ S S D ++ IWD + GK L + AH+ V+ + +NR S L+ S S DG
Sbjct: 140 -QSNLIVSGSFDESVRIWDVKTGK-CLKTLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCR 196
Query: 351 IHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLS 402
I D G + + PV+ +++SP+ G + ++ DN L +WD S
Sbjct: 197 IWDTA---SGQCLKTLIDDDNPPVSFVKFSPN-GKYILAATLDNTLKLWDYS 244
>UNIPROTKB|B4GDM7 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7234 "Drosophila persimilis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH479181 OrthoDB:EOG45DV4X RefSeq:XP_002015794.1
ProteinModelPortal:B4GDM7 GeneID:6591258 KEGG:dpe:Dper_GL10827
FlyBase:FBgn0148437 Uniprot:B4GDM7
Length = 335
Score = 155 (59.6 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 47/172 (27%), Positives = 75/172 (43%)
Query: 231 GHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSP 290
GHK + + W+P G+ + I +W S TW+ GH ++ +++WSP
Sbjct: 12 GHKGRIWGVAWHPKGNVFASCGE-DKAIRVWS-LSGNTWSTKTILSDGHKRTIREIRWSP 69
Query: 291 TESDVFASCSVDGNIAIWDTRVGK-SALMSFKAHNADVNVISWNRLASCLLASGSDDGTF 349
AS S D AIW G+ + + H +V +SW+R LLA+ S D +
Sbjct: 70 C-GQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGG-LLATCSRDKSV 127
Query: 350 SIHDLRLLKGGDSV--VAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
I ++ G D A H V + W P + LA +S DN + ++
Sbjct: 128 WIWEVA---GDDEFECAAVLNAHTQDVKRVVWHPTK-DILASASYDNTIKMF 175
>UNIPROTKB|Q292E8 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:46245 "Drosophila pseudoobscura
pseudoobscura" [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CM000071 GenomeReviews:CM000071_GR OMA:SWKCVCT
OrthoDB:EOG45DV4X HSSP:P63005 RefSeq:XP_001360339.1
ProteinModelPortal:Q292E8 GeneID:4803656 KEGG:dpo:Dpse_GA11817
FlyBase:FBgn0071866 InParanoid:Q292E8 Uniprot:Q292E8
Length = 335
Score = 155 (59.6 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 47/172 (27%), Positives = 75/172 (43%)
Query: 231 GHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSP 290
GHK + + W+P G+ + I +W S TW+ GH ++ +++WSP
Sbjct: 12 GHKGRIWGVAWHPKGNVFASCGE-DKAIRVWS-LSGNTWSTKTILSDGHKRTIREIRWSP 69
Query: 291 TESDVFASCSVDGNIAIWDTRVGK-SALMSFKAHNADVNVISWNRLASCLLASGSDDGTF 349
AS S D AIW G+ + + H +V +SW+R LLA+ S D +
Sbjct: 70 C-GQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGG-LLATCSRDKSV 127
Query: 350 SIHDLRLLKGGDSV--VAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
I ++ G D A H V + W P + LA +S DN + ++
Sbjct: 128 WIWEVA---GDDEFECAAVLNAHTQDVKRVVWHPTK-DILASASYDNTIKMF 175
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 154 (59.3 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 51/185 (27%), Positives = 88/185 (47%)
Query: 218 PQVLNQSPLVKF--GGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNP 275
P + + +KF GH ++ ++P L S + I +W A D +
Sbjct: 2 PTPVKPNYALKFTLAGHTKAVSSVKFSPNGEW-LASSSADKLIKIWG-AYDGKFE---KT 56
Query: 276 FIGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRL 335
GH + D+ WS ++S++ S S D + IWD GK L + K H+ V ++N
Sbjct: 57 ISGHKLGISDVAWS-SDSNLLVSASDDKTLKIWDVSSGK-CLKTLKGHSNYVFCCNFNPQ 114
Query: 336 ASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQ 395
++ L+ SGS D + I D++ K ++ AH + PV+++ ++ +GS + SS D
Sbjct: 115 SN-LIVSGSFDESVRIWDVKTGKCLKTLPAHSD----PVSAVHFN-RDGSLIVSSSYDGL 168
Query: 396 LTIWD 400
IWD
Sbjct: 169 CRIWD 173
Score = 153 (58.9 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 48/172 (27%), Positives = 82/172 (47%)
Query: 231 GHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSP 290
GHK + W+ + LVS + + +W+ +S GH+ V ++P
Sbjct: 59 GHKLGISDVAWSSDS-NLLVSASDDKTLKIWDVSSGKCLKT----LKGHSNYVFCCNFNP 113
Query: 291 TESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFS 350
+S++ S S D ++ IWD + GK L + AH+ V+ + +NR S L+ S S DG
Sbjct: 114 -QSNLIVSGSFDESVRIWDVKTGK-CLKTLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCR 170
Query: 351 IHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLS 402
I D G + + PV+ +++SP+ G + ++ DN L +WD S
Sbjct: 171 IWDTA---SGQCLKTLIDDDNPPVSFVKFSPN-GKYILAATLDNTLKLWDYS 218
>UNIPROTKB|Q6PJI9 [details] [associations]
symbol:WDR59 "WD repeat-containing protein 59" species:9606
"Homo sapiens" [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006575 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50908
SMART:SM00320 SMART:SM00591 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
Gene3D:3.10.110.10 InterPro:IPR016135 OMA:TGGWNIA EMBL:AK022332
EMBL:AK091316 EMBL:AF370390 EMBL:BC004519 EMBL:BC014887
EMBL:AB067510 IPI:IPI00012257 IPI:IPI00242841 IPI:IPI00644331
IPI:IPI00646489 RefSeq:NP_085058.3 UniGene:Hs.280951
ProteinModelPortal:Q6PJI9 SMR:Q6PJI9 IntAct:Q6PJI9 STRING:Q6PJI9
PhosphoSite:Q6PJI9 DMDM:134035358 PaxDb:Q6PJI9 PRIDE:Q6PJI9
Ensembl:ENST00000262144 GeneID:79726 KEGG:hsa:79726 UCSC:uc002fdf.1
UCSC:uc002fdg.1 CTD:79726 GeneCards:GC16M074908 H-InvDB:HIX0013239
HGNC:HGNC:25706 HPA:HPA041084 neXtProt:NX_Q6PJI9
PharmGKB:PA142670593 HOGENOM:HOG000004834 HOVERGEN:HBG092820
InParanoid:Q6PJI9 OrthoDB:EOG4CNQQ9 GenomeRNAi:79726 NextBio:69094
Bgee:Q6PJI9 CleanEx:HS_WDR59 Genevestigator:Q6PJI9 Uniprot:Q6PJI9
Length = 974
Score = 168 (64.2 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 47/165 (28%), Positives = 71/165 (43%)
Query: 238 AIDWNPVAP-GRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVF 296
A+ WNP + N + L++ D + V GH + DL W+ E D+
Sbjct: 64 AVQWNPHDSFAHYFAASSNQRVDLYK-WKDGSGEVGTT-LQGHTRVISDLDWAVFEPDLL 121
Query: 297 ASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRL-ASCLLASGSDDGTFSIHDLR 355
+ SVD I IWD + + ++ A A + + WN+ A+CL S DG I D R
Sbjct: 122 VTSSVDTYIYIWDIKDTRKPTVALSAV-AGASQVKWNKKNANCLATS--HDGDVRIWDKR 178
Query: 356 LLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWD 400
+ V + H + ++W P LA SS DN + WD
Sbjct: 179 K---PSTAVEYLAAHLSKIHGLDWHPDSEHILATSSQDNSVKFWD 220
Score = 128 (50.1 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 38/175 (21%), Positives = 77/175 (44%)
Query: 231 GHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSP 290
GH +DW P LV+ ++ I++W+ D P + A ++W+
Sbjct: 103 GHTRVISDLDWAVFEPDLLVTSSVDTYIYIWD-IKDTR---KPTVALSAVAGASQVKWNK 158
Query: 291 TESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFS 350
++ A+ S DG++ IWD R +A+ AH + ++ + W+ + +LA+ S D +
Sbjct: 159 KNANCLAT-SHDGDVRIWDKRKPSTAVEYLAAHLSKIHGLDWHPDSEHILATSSQDNSVK 217
Query: 351 IHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVS----SADNQLTIWDL 401
D R + +++ + PV ++P + V +N L +W++
Sbjct: 218 FWDYRQPRKYLNILPC----QVPVWKARYTPFSNGLVTVMVPQLRRENSLLLWNV 268
Score = 40 (19.1 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 451 PGMIVSTAADGFNILMPSNIQSTL 474
P + AA F + P+ I ST+
Sbjct: 434 PAQYPNNAAPSFQFINPTTITSTM 457
>UNIPROTKB|F1NYZ8 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0008013 "beta-catenin
binding" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 EMBL:AADN02020878
EMBL:AADN02020879 EMBL:AADN02020880 EMBL:AADN02020881
EMBL:AADN02020882 EMBL:AADN02020883 EMBL:AADN02020884
EMBL:AADN02020885 EMBL:AADN02020886 EMBL:AADN02020887
EMBL:AADN02020888 EMBL:AADN02020889 EMBL:AADN02020890
EMBL:AADN02020891 EMBL:AADN02020892 EMBL:AADN02020893
EMBL:AADN02020894 EMBL:AADN02020895 EMBL:AADN02020896
EMBL:AADN02020897 EMBL:AADN02020898 IPI:IPI00594570
Ensembl:ENSGALT00000001912 ArrayExpress:F1NYZ8 Uniprot:F1NYZ8
Length = 517
Score = 158 (60.7 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 66/245 (26%), Positives = 104/245 (42%)
Query: 230 GGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWS 289
G HK +A+ WN L +G + I +W DA F H+A D+ W
Sbjct: 263 GQHKGPIFALKWNKKGNFILSAGVDKTTI-IW----DAHTGEAKQQFPFHSAPALDVDWQ 317
Query: 290 PTESDVFASCSVDGNIAIWDTRVGKSA-LMSFKAHNADVNVISWNRLASCLLASGSDDGT 348
++ FASCS D + I ++G+ + +F+ H +VN I W+ + LLAS SDD T
Sbjct: 318 --SNNTFASCSTD--MCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGN-LLASCSDDMT 372
Query: 349 FSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGST-----------LAVSSADNQLT 397
I ++ DS V + H + +I+WSP T L +S D+ +
Sbjct: 373 LKIWSMKQ----DSCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASLDSASFDSTVR 428
Query: 398 IWDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQKDLKELH-WHTQVPGMIVS 456
+WD+ +E V + P ++ G D K +H W+TQ ++ S
Sbjct: 429 LWDVDRGICIHTLTKH----QEPVYSVA-FSPDGRYLASGSFD-KCVHIWNTQTGALVHS 482
Query: 457 TAADG 461
G
Sbjct: 483 YRGTG 487
Score = 138 (53.6 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 48/166 (28%), Positives = 75/166 (45%)
Query: 238 AIDWNPVAPGRLVS-GDCNSCIHLWEPASDATWNVDPNPFIG-HAASVEDLQWSPTESDV 295
++DWN + G L++ G + +W D N+ +G H + L+W+ + +
Sbjct: 230 SLDWN--SEGTLLATGSYDGFARIW--TKDG--NLAST--LGQHKGPIFALKWNK-KGNF 280
Query: 296 FASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLR 355
S VD IWD G+ A F H+A + W ++ AS S D IH +
Sbjct: 281 ILSAGVDKTTIIWDAHTGE-AKQQFPFHSAPALDVDWQ--SNNTFASCSTD--MCIHVCK 335
Query: 356 LLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDL 401
L G D + F+ H + V +I+W P G+ LA S D L IW +
Sbjct: 336 L--GQDRPIKTFQGHTNEVNAIKWDP-TGNLLASCSDDMTLKIWSM 378
Score = 129 (50.5 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 45/174 (25%), Positives = 75/174 (43%)
Query: 231 GHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAA--------- 281
GH+ E + WNPV+ L SG +S +W + ++T + + H
Sbjct: 167 GHESEVFICAWNPVSD-LLASGSGDSTARIWNLSENST-SGSTQLVLRHCIREGGQDVPS 224
Query: 282 --SVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCL 339
V L W+ +E + A+ S DG IW T+ G A + H + + WN+ + +
Sbjct: 225 NKDVTSLDWN-SEGTLLATGSYDGFARIW-TKDGNLA-STLGQHKGPIFALKWNKKGNFI 281
Query: 340 LASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSAD 393
L++G D T I D G++ F +H P ++W + +T A S D
Sbjct: 282 LSAGVDKTTI-IWDAHT---GEAK-QQFPFHSAPALDVDWQSN--NTFASCSTD 328
>ZFIN|ZDB-GENE-070112-342 [details] [associations]
symbol:gnb5a "guanine nucleotide binding protein (G
protein), beta 5a" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 ZFIN:ZDB-GENE-070112-342 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539
OMA:ATDGLHE OrthoDB:EOG4XWFXZ EMBL:AL954697 EMBL:BC129375
IPI:IPI00512905 RefSeq:NP_001073650.1 UniGene:Dr.108630 SMR:A1L271
Ensembl:ENSDART00000027720 GeneID:562813 KEGG:dre:562813 CTD:562813
InParanoid:A1L271 NextBio:20884602 Uniprot:A1L271
Length = 355
Score = 155 (59.6 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 54/182 (29%), Positives = 85/182 (46%)
Query: 233 KDEGYAIDWNPVAPG-RLVSGDC--NSCIHLWEPASDAT---WNVDPNP----FIGHAAS 282
K+E A VA +S C NS + + + D T W+V+ F GHAA
Sbjct: 140 KNENLAAKKKSVAMHTNYLSACCFTNSDMQILTSSGDGTCALWDVESGQMLQSFHGHAAD 199
Query: 283 VEDLQWSPTES-DVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLA 341
V L +P+E+ + F S D +WD R G+ + SF++H++D+N + + A
Sbjct: 200 VLCLDLAPSETGNTFVSGGCDKKACVWDMRTGQ-CVQSFESHDSDINSVRYYPSGDAF-A 257
Query: 342 SGSDDGTFSIHDLRLLKGGDSVVAHFEYHK--HPVTSIEWSPHEGSTLAVSSADNQLTIW 399
SGSDD T ++DLR D VA + +S+++S G L D + +W
Sbjct: 258 SGSDDATCRLYDLR----ADREVAIYSKESIIFGASSVDFSL-SGRLLFGGYNDYTINVW 312
Query: 400 DL 401
D+
Sbjct: 313 DV 314
>UNIPROTKB|C3UJQ7 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1 Y-linked"
species:9593 "Gorilla gorilla" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0000122 GO:GO:0007605 InterPro:IPR013720
Pfam:PF08513 GO:GO:0042393 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 HOGENOM:HOG000220902 EMBL:FJ532265
ProteinModelPortal:C3UJQ7 Uniprot:C3UJQ7
Length = 524
Score = 158 (60.7 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 54/181 (29%), Positives = 83/181 (45%)
Query: 230 GGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWS 289
G HK +A+ WN L +G + I +W DA F H+A D+ W
Sbjct: 273 GQHKGPIFALKWNKKGNYILSAGVDKTTI-IW----DAHTGEAKQQFPFHSAPALDVDWQ 327
Query: 290 PTESDVFASCSVDGNIAIWDTRVGKSA-LMSFKAHNADVNVISWNRLASCLLASGSDDGT 348
+ FASC D + I R+G + +F+ H +VN I W+ + LLAS SDD T
Sbjct: 328 --NNTTFASCGTD--MCIHVCRLGCDLPVKTFQGHTNEVNAIKWDP-SGMLLASCSDDMT 382
Query: 349 FSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGST--------LAVSSADNQLTIWD 400
I ++ D+ V + H + +I+WSP +T LA +S D+ + +WD
Sbjct: 383 LKIWSMKQ----DACVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWD 438
Query: 401 L 401
+
Sbjct: 439 V 439
Score = 140 (54.3 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 51/169 (30%), Positives = 74/169 (43%)
Query: 238 AIDWNPVAPGRLVS-GDCNSCIHLWEPASDATWNVDPNPFIG-HAASVEDLQWSPTESDV 295
++DWN + G L++ G + +W T N + +G H + L+W+ + +
Sbjct: 240 SLDWN--SDGTLLAMGSYDGFARIW------TENGNLASTLGQHKGPIFALKWNK-KGNY 290
Query: 296 FASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNR---LASCLLASGSDDGTFSIH 352
S VD IWD G+ A F H+A + W ASC G+D IH
Sbjct: 291 ILSAGVDKTTIIWDAHTGE-AKQQFPFHSAPALDVDWQNNTTFASC----GTD---MCIH 342
Query: 353 DLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDL 401
RL G D V F+ H + V +I+W P G LA S D L IW +
Sbjct: 343 VCRL--GCDLPVKTFQGHTNEVNAIKWDP-SGMLLASCSDDMTLKIWSM 388
>UNIPROTKB|B4QFZ8 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7240 "Drosophila simulans"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CM000362 OrthoDB:EOG45DV4X RefSeq:XP_002081558.1
UniGene:Dsi.12266 ProteinModelPortal:B4QFZ8
EnsemblMetazoa:FBtr0225561 GeneID:6734549 KEGG:dsi:Dsim_GD25651
FlyBase:FBgn0196936 Uniprot:B4QFZ8
Length = 335
Score = 154 (59.3 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 46/172 (26%), Positives = 75/172 (43%)
Query: 231 GHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSP 290
GHK + + W+P G+ + I +W + TW+ GH ++ +++WSP
Sbjct: 12 GHKGRIWGVAWHPKGNVFASCGE-DKAIRIWSLTGN-TWSTKTILSDGHKRTIREIRWSP 69
Query: 291 TESDVFASCSVDGNIAIWDTRVGK-SALMSFKAHNADVNVISWNRLASCLLASGSDDGTF 349
AS S D AIW G+ + + H +V +SW+R LLA+ S D +
Sbjct: 70 C-GQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGG-LLATCSRDKSV 127
Query: 350 SIHDLRLLKGGDSV--VAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
I ++ G D A H V + W P + LA +S DN + ++
Sbjct: 128 WIWEVA---GDDEFECAAVLNPHTQDVKRVVWHPTK-DVLASASYDNTIKMF 175
Score = 132 (51.5 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 38/127 (29%), Positives = 54/127 (42%)
Query: 278 GHAASVEDLQWSPTESDVFASCSVDGNIAIWDT--RVGKSALMSFKAHNADVNVISWNRL 335
GH + + W P + +VFASC D I IW + + H + I W+
Sbjct: 12 GHKGRIWGVAWHP-KGNVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTIREIRWSPC 70
Query: 336 ASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQ 395
LAS S D T +I G A E H++ V S+ WS G LA S D
Sbjct: 71 GQ-YLASASFDATTAIWSKS--SGEFECNATLEGHENEVKSVSWS-RSGGLLATCSRDKS 126
Query: 396 LTIWDLS 402
+ IW+++
Sbjct: 127 VWIWEVA 133
>UNIPROTKB|P93397 [details] [associations]
symbol:P93397 "Guanine nucleotide-binding protein subunit
beta-1" species:4097 "Nicotiana tabacum" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:Z84820 PIR:T04086 ProteinModelPortal:P93397
IntAct:P93397 Uniprot:P93397
Length = 377
Score = 155 (59.6 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 52/180 (28%), Positives = 82/180 (45%)
Query: 231 GHKDEGYAIDWNPVAPGRLV--SGDCNSCIHLWEPASDATWNVDPNPF-IGHAASVEDLQ 287
GHK + + P L+ SGD +C+ LW+ + +V F GH A V+ +
Sbjct: 154 GHKGYVSSCQYVPDEDTHLITSSGD-QTCV-LWDITTGLRTSVFGGEFQSGHTADVQSVS 211
Query: 288 WSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDG 347
S + +F S S D +WDTRV A +F H DVN + + + +GS+DG
Sbjct: 212 ISSSNPRLFVSGSCDTTARLWDTRVASRAQRTFYGHEGDVNTVKFFPDGN-RFGTGSEDG 270
Query: 348 TFSIHDLRLLKGGDSVVAHFEYHKH---P-VTSIEWSPHEGSTLAVSSADNQLTIWDLSL 403
T + D+R + +++ H P VTS+ +S G L V ++ +WD L
Sbjct: 271 TCRLFDIRT---EHQLQVYYQPHGDGDIPHVTSMAFSI-SGRLLFVGYSNGDCYVWDTLL 326
Score = 119 (46.9 bits), Expect = 0.00032, P = 0.00032
Identities = 36/128 (28%), Positives = 58/128 (45%)
Query: 278 GHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLAS 337
GH V L W+P E + S S DG + +W+ + + K A V +++
Sbjct: 63 GHTGKVYSLDWTP-EKNRIVSASQDGRLIVWNALTSQKT-HAIKLPCAWVMTCAFSPSGQ 120
Query: 338 CLLASGSDDGTFSIHDLR--LLKGGDSVVAHF-EYHKHPVTSIEWSPHEGSTLAVSSADN 394
+ A G D SI +L + K G+ V+ HK V+S ++ P E + L SS D
Sbjct: 121 SV-ACGGLDSVCSIFNLNSPIDKDGNHPVSRMLSGHKGYVSSCQYVPDEDTHLITSSGDQ 179
Query: 395 QLTIWDLS 402
+WD++
Sbjct: 180 TCVLWDIT 187
Score = 118 (46.6 bits), Expect = 0.00041, P = 0.00041
Identities = 48/181 (26%), Positives = 78/181 (43%)
Query: 229 FGGHKDEGYAIDWNPVA-----PGRLVSGDCNSCIHLWEP--ASDATWNVDPNPFIGHAA 281
FGG G+ D V+ P VSG C++ LW+ AS A F GH
Sbjct: 195 FGGEFQSGHTADVQSVSISSSNPRLFVSGSCDTTARLWDTRVASRAQ-----RTFYGHEG 249
Query: 282 SVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAH-NADV-NVISWN-RLASC 338
V +++ P + + F + S DG ++D R + ++ H + D+ +V S ++
Sbjct: 250 DVNTVKFFP-DGNRFGTGSEDGTCRLFDIRTEHQLQVYYQPHGDGDIPHVTSMAFSISGR 308
Query: 339 LLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTI 398
LL G +G + D L K ++ H+ ++ + S +GS L S D L I
Sbjct: 309 LLFVGYSNGDCYVWDTLLAKVVLNLGGVQNSHEGRISCLGLSA-DGSALCTGSWDTNLKI 367
Query: 399 W 399
W
Sbjct: 368 W 368
>CGD|CAL0003130 [details] [associations]
symbol:orf19.7185 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0003130 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR022052 Pfam:PF12265 EMBL:AACQ01000089
RefSeq:XP_715234.1 RefSeq:XP_889000.1 ProteinModelPortal:Q5A0B0
GeneID:3643101 GeneID:3704066 KEGG:cal:CaO19.7185
KEGG:cal:CaO19_7185 HOGENOM:HOG000137539 Uniprot:Q5A0B0
Length = 485
Score = 155 (59.6 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 72/306 (23%), Positives = 113/306 (36%)
Query: 190 DTGHVQV---WDFRSHLNALAESET---VAGHGAPQVLNQSPLVKFGG-----HKDEGYA 238
DT + +V W +N L S G A V+ L F HK G A
Sbjct: 159 DTSNFKVVTQWKQTQEINKLKVSPNGSLAVGFSADGVIRSYNLDNFDSVDYKYHKQGGIA 218
Query: 239 IDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDP-NPFIGHAASVEDLQWSPTESDVFA 297
+DW V +SG ++ I LW+ +T P F GH ++ D+ S E +F
Sbjct: 219 LDW--VDNNGFLSGSNDAQIALWQVDKSST----PLQLFKGHHGAINDIS-SIKEKHLFG 271
Query: 298 SCSVDGNIAIWDTRVGKSALMS-FKAHNADV-NVISWNRLASCLLASGSDDGTFSIHDLR 355
S S D DTRV + + N+ + N I ++ L A+G D S++D+R
Sbjct: 272 SVSDDSTTQFHDTRVNATDINPVITVENSHIQNCIQFHPDIQTLYATGGKDNVVSLYDIR 331
Query: 356 LLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDL-SLXXXXXX--XXX 412
+ F H V ++W + L D ++ WDL +L
Sbjct: 332 ---NYSTPFRKFYGHNDSVRQLQWDWNNPDILVSCGLDKRIIFWDLKNLDEDFTYPDATS 388
Query: 413 XXXXTREQVNAPEDLPPQLLFIHQGQ-KDLKELHWHTQVPGMIVSTAADGF-NILMPSNI 470
T + P L ++H G + + H +V + S D I P ++
Sbjct: 389 NGKDTNSKRKQAVKTDPCLKYVHGGHTRRTNDFDIHPKVKNIFGSVGDDKLLEIWKPKSL 448
Query: 471 QSTLPQ 476
P+
Sbjct: 449 PGDEPE 454
Score = 44 (20.5 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 15/59 (25%), Positives = 27/59 (45%)
Query: 58 PTAYNSLHAFHIGWPCLSFDILRDTLGLVRNEFPYTAYFVAGSQAEKPSWNSIGVFKVS 116
P Y+ +H F + P L F L T + +++ F+ G+ A S N + + +S
Sbjct: 84 PLLYDFIHTFALDNPSLVFQWL-PTTSVSQSDLELK--FLIGTNAINKSENYLKLTSIS 139
>UNIPROTKB|Q5A0B0 [details] [associations]
symbol:CaO19.7185 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0003130 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR022052 Pfam:PF12265 EMBL:AACQ01000089
RefSeq:XP_715234.1 RefSeq:XP_889000.1 ProteinModelPortal:Q5A0B0
GeneID:3643101 GeneID:3704066 KEGG:cal:CaO19.7185
KEGG:cal:CaO19_7185 HOGENOM:HOG000137539 Uniprot:Q5A0B0
Length = 485
Score = 155 (59.6 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 72/306 (23%), Positives = 113/306 (36%)
Query: 190 DTGHVQV---WDFRSHLNALAESET---VAGHGAPQVLNQSPLVKFGG-----HKDEGYA 238
DT + +V W +N L S G A V+ L F HK G A
Sbjct: 159 DTSNFKVVTQWKQTQEINKLKVSPNGSLAVGFSADGVIRSYNLDNFDSVDYKYHKQGGIA 218
Query: 239 IDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDP-NPFIGHAASVEDLQWSPTESDVFA 297
+DW V +SG ++ I LW+ +T P F GH ++ D+ S E +F
Sbjct: 219 LDW--VDNNGFLSGSNDAQIALWQVDKSST----PLQLFKGHHGAINDIS-SIKEKHLFG 271
Query: 298 SCSVDGNIAIWDTRVGKSALMS-FKAHNADV-NVISWNRLASCLLASGSDDGTFSIHDLR 355
S S D DTRV + + N+ + N I ++ L A+G D S++D+R
Sbjct: 272 SVSDDSTTQFHDTRVNATDINPVITVENSHIQNCIQFHPDIQTLYATGGKDNVVSLYDIR 331
Query: 356 LLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDL-SLXXXXXX--XXX 412
+ F H V ++W + L D ++ WDL +L
Sbjct: 332 ---NYSTPFRKFYGHNDSVRQLQWDWNNPDILVSCGLDKRIIFWDLKNLDEDFTYPDATS 388
Query: 413 XXXXTREQVNAPEDLPPQLLFIHQGQ-KDLKELHWHTQVPGMIVSTAADGF-NILMPSNI 470
T + P L ++H G + + H +V + S D I P ++
Sbjct: 389 NGKDTNSKRKQAVKTDPCLKYVHGGHTRRTNDFDIHPKVKNIFGSVGDDKLLEIWKPKSL 448
Query: 471 QSTLPQ 476
P+
Sbjct: 449 PGDEPE 454
Score = 44 (20.5 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 15/59 (25%), Positives = 27/59 (45%)
Query: 58 PTAYNSLHAFHIGWPCLSFDILRDTLGLVRNEFPYTAYFVAGSQAEKPSWNSIGVFKVS 116
P Y+ +H F + P L F L T + +++ F+ G+ A S N + + +S
Sbjct: 84 PLLYDFIHTFALDNPSLVFQWL-PTTSVSQSDLELK--FLIGTNAINKSENYLKLTSIS 139
>UNIPROTKB|G4NFU5 [details] [associations]
symbol:MGG_08708 "WD repeat-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001236 PRINTS:PR00319
KO:K14855 RefSeq:XP_003719269.1 ProteinModelPortal:G4NFU5
EnsemblFungi:MGG_08708T0 GeneID:2678953 KEGG:mgr:MGG_08708
Uniprot:G4NFU5
Length = 526
Score = 157 (60.3 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 47/176 (26%), Positives = 75/176 (42%)
Query: 231 GHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSP 290
GH + ++P + RL +G ++ +W DA + GHA V + WSP
Sbjct: 150 GHGEPILCAQFSPASSARLATGSGDNTARIW----DAETGTPKHTLKGHAGWVLGVSWSP 205
Query: 291 TESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRL-----ASCLLASGSD 345
+ A+CS+D + IWD GK K H V I+W L + L S S
Sbjct: 206 -DGTRLATCSMDKTVRIWDPETGKQVGSELKGHAKWVQGIAWEPLHLWRDGTPRLVSASK 264
Query: 346 DGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLA-VSSADNQLTIWD 400
D T I + + + V++ HK V+ + W G+ + +S D + +WD
Sbjct: 265 DFTARIWTVNTGRT-EHVLSG---HKGSVSCVRWGAGNGTGVVYTASHDKTVKVWD 316
Score = 136 (52.9 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 41/152 (26%), Positives = 71/152 (46%)
Query: 248 RLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNIAI 307
RLVS + ++L++P +D T + IGH V + +SP + + AS D +
Sbjct: 383 RLVSASDDFTMYLFDPLNDGTKPIAR--MIGHQKQVNHVTFSP-DGSMIASAGWDNATKL 439
Query: 308 WDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHF 367
W+ R GK + + + H A V S++ S LL + S D T + ++R K +
Sbjct: 440 WNARDGKF-INTLRGHVAPVYQCSFSA-DSRLLVTASKDTTLKVWNVRTGK----LATDL 493
Query: 368 EYHKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
H+ V ++WSP +G + D + +W
Sbjct: 494 PGHEDEVYGVDWSP-DGQRVGSGGRDKAVRLW 524
>SGD|S000005261 [details] [associations]
symbol:PFS2 "Subunit of the cleavage and polyadenylation
factor (CPF) complex" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IDA]
[GO:0006379 "mRNA cleavage" evidence=IMP;IDA] [GO:0006378 "mRNA
polyadenylation" evidence=IMP;IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000005261 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 GO:GO:0006378 EMBL:BK006947 EMBL:Z46259
GO:GO:0005847 GO:GO:0006379 GeneTree:ENSGT00540000070914 KO:K15542
HOGENOM:HOG000213918 OrthoDB:EOG4QVGMD EMBL:Z71593 EMBL:AY693058
PIR:S51295 RefSeq:NP_014082.1 ProteinModelPortal:P42841 SMR:P42841
DIP:DIP-5816N IntAct:P42841 MINT:MINT-381244 STRING:P42841
PaxDb:P42841 PeptideAtlas:P42841 EnsemblFungi:YNL317W GeneID:855399
KEGG:sce:YNL317W CYGD:YNL317w OMA:NGMTFNF NextBio:979220
Genevestigator:P42841 GermOnline:YNL317W Uniprot:P42841
Length = 465
Score = 156 (60.0 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 41/153 (26%), Positives = 70/153 (45%)
Query: 249 LVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNIAIW 308
++SGD + I +W+P +D H S+ D+ +S +S F +CS D + IW
Sbjct: 150 MISGDADGMIKIWQPNFSMVKEIDA----AHTESIRDMAFSSNDSK-FVTCSDDNILKIW 204
Query: 309 DTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFE 368
+ GK + H+ DV W+ L+AS S D + D R G+ + + +
Sbjct: 205 NFSNGKQERV-LSGHHWDVKSCDWHPEMG-LIASASKDNLVKLWDPR---SGNCISSILK 259
Query: 369 YHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDL 401
+ KH V + P +G+ L S D ++D+
Sbjct: 260 F-KHTVLKTRFQPTKGNLLMAISKDKSCRVFDI 291
Score = 119 (46.9 bits), Expect = 0.00045, P = 0.00045
Identities = 37/170 (21%), Positives = 73/170 (42%)
Query: 231 GHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSP 290
GH + + DW+P G + S ++ + LW+P S N + + +V ++ P
Sbjct: 217 GHHWDVKSCDWHPEM-GLIASASKDNLVKLWDPRSG---NCISS-ILKFKHTVLKTRFQP 271
Query: 291 TESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFS 350
T+ ++ + S D + ++D R LM + D + W+ + + DG+
Sbjct: 272 TKGNLLMAISKDKSCRVFDIRYSMKELMCVR-DETDYMTLEWHPINESMFTLACYDGSLK 330
Query: 351 IHDLRLLKGGDSVVAHFEY-HKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
DL L+ + + Y H +TS+ ++P G A ++ D + W
Sbjct: 331 HFDL--LQNLNEPILTIPYAHDKCITSLSYNP-VGHIFATAAKDRTIRFW 377
>UNIPROTKB|B4JW81 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7222 "Drosophila grimshawi"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH916375 OMA:SWKCVCT OrthoDB:EOG45DV4X
RefSeq:XP_001995147.1 ProteinModelPortal:B4JW81 STRING:B4JW81
EnsemblMetazoa:FBtr0158402 GeneID:6569131 KEGG:dgr:Dgri_GH22988
FlyBase:FBgn0130445 InParanoid:B4JW81 Uniprot:B4JW81
Length = 331
Score = 153 (58.9 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 45/171 (26%), Positives = 75/171 (43%)
Query: 231 GHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSP 290
GHK + + W+P G+ + I +W + + TW GH ++ +++WSP
Sbjct: 12 GHKGRIWGVAWHPKGNSFASCGE-DKAIRIWSQSGN-TWTTKTILSDGHKRTIREVRWSP 69
Query: 291 TESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFS 350
+ AS S D AIW + L + H +V +SW++ LLA+ S D +
Sbjct: 70 C-GEYLASASFDATTAIWSKHECNATL---EGHENEVKSVSWSQSGG-LLATCSRDKSVW 124
Query: 351 IHDLRLLKGGDSV--VAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
I ++ G D A H V + W P + LA +S DN + ++
Sbjct: 125 IWEVA---GDDEFECAAVLNAHTQDVKRVVWHPSK-EILASASYDNTIKMY 171
>UNIPROTKB|B4HRQ6 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7238 "Drosophila sechellia"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH480816 OrthoDB:EOG45DV4X RefSeq:XP_002033907.1
ProteinModelPortal:B4HRQ6 EnsemblMetazoa:FBtr0203159 GeneID:6609216
KEGG:dse:Dsec_GM20174 FlyBase:FBgn0175057 Uniprot:B4HRQ6
Length = 335
Score = 153 (58.9 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 46/172 (26%), Positives = 74/172 (43%)
Query: 231 GHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSP 290
GHK + + W+P G+ + I +W + TW GH ++ +++WSP
Sbjct: 12 GHKGRIWGVAWHPKGNVFASCGE-DKAIRIWSLTGN-TWGTKTILSDGHKRTIREIRWSP 69
Query: 291 TESDVFASCSVDGNIAIWDTRVGK-SALMSFKAHNADVNVISWNRLASCLLASGSDDGTF 349
AS S D AIW G+ + + H +V +SW+R LLA+ S D +
Sbjct: 70 C-GQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGG-LLATCSRDKSV 127
Query: 350 SIHDLRLLKGGDSV--VAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
I ++ G D A H V + W P + LA +S DN + ++
Sbjct: 128 WIWEVA---GDDEFECAAVLNPHTQDVKRVVWHPTK-DVLASASYDNTIKMF 175
Score = 137 (53.3 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 40/128 (31%), Positives = 56/128 (43%)
Query: 278 GHAASVEDLQWSPTESDVFASCSVDGNIAIWD---TRVGKSALMSFKAHNADVNVISWNR 334
GH + + W P + +VFASC D I IW G ++S H + I W+
Sbjct: 12 GHKGRIWGVAWHP-KGNVFASCGEDKAIRIWSLTGNTWGTKTILS-DGHKRTIREIRWSP 69
Query: 335 LASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADN 394
LAS S D T +I G A E H++ V S+ WS G LA S D
Sbjct: 70 CGQ-YLASASFDATTAIWSKS--SGEFECNATLEGHENEVKSVSWS-RSGGLLATCSRDK 125
Query: 395 QLTIWDLS 402
+ IW+++
Sbjct: 126 SVWIWEVA 133
>FB|FBgn0033972 [details] [associations]
symbol:Ciao1 "Ciao1" species:7227 "Drosophila melanogaster"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE013599 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
OrthoDB:EOG45DV4X CTD:9391 GeneTree:ENSGT00700000104486
EMBL:AY061388 RefSeq:NP_610996.1 UniGene:Dm.630
ProteinModelPortal:Q7K1Y4 SMR:Q7K1Y4 IntAct:Q7K1Y4 STRING:Q7K1Y4
PaxDb:Q7K1Y4 PRIDE:Q7K1Y4 EnsemblMetazoa:FBtr0087460 GeneID:36655
KEGG:dme:Dmel_CG12797 UCSC:CG12797-RA FlyBase:FBgn0033972
InParanoid:Q7K1Y4 PhylomeDB:Q7K1Y4 GenomeRNAi:36655 NextBio:799718
Bgee:Q7K1Y4 Uniprot:Q7K1Y4
Length = 335
Score = 153 (58.9 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 46/172 (26%), Positives = 75/172 (43%)
Query: 231 GHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSP 290
GHK + + W+P G+ + I +W + TW+ GH ++ +++WSP
Sbjct: 12 GHKGRIWGVAWHPKGNVFASCGE-DKAIRIWSLTGN-TWSTKTILSDGHKRTIREIRWSP 69
Query: 291 TESDVFASCSVDGNIAIWDTRVGK-SALMSFKAHNADVNVISWNRLASCLLASGSDDGTF 349
AS S D AIW G+ + + H +V +SW+R LLA+ S D +
Sbjct: 70 C-GQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGG-LLATCSRDKSV 127
Query: 350 SIHDLRLLKGGDSV--VAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
I ++ G D A H V + W P + LA +S DN + ++
Sbjct: 128 WIWEVA---GDDEFECAAVLNPHTQDVKRVVWHPTK-DILASASYDNTIKMF 175
Score = 132 (51.5 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 38/127 (29%), Positives = 54/127 (42%)
Query: 278 GHAASVEDLQWSPTESDVFASCSVDGNIAIWDT--RVGKSALMSFKAHNADVNVISWNRL 335
GH + + W P + +VFASC D I IW + + H + I W+
Sbjct: 12 GHKGRIWGVAWHP-KGNVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTIREIRWSPC 70
Query: 336 ASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQ 395
LAS S D T +I G A E H++ V S+ WS G LA S D
Sbjct: 71 GQ-YLASASFDATTAIWSKS--SGEFECNATLEGHENEVKSVSWS-RSGGLLATCSRDKS 126
Query: 396 LTIWDLS 402
+ IW+++
Sbjct: 127 VWIWEVA 133
>RGD|735072 [details] [associations]
symbol:Wdr12 "WD repeat domain 12" species:10116 "Rattus
norvegicus" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO;ISS]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO;ISS]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO;ISS]
[GO:0007219 "Notch signaling pathway" evidence=IEA;ISO] [GO:0008283
"cell proliferation" evidence=ISO;ISS] [GO:0030687 "preribosome,
large subunit precursor" evidence=ISO;ISS] [GO:0070545 "PeBoW
complex" evidence=ISO;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:735072 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:BC063180 IPI:IPI00400751
RefSeq:NP_955442.1 UniGene:Rn.106890 ProteinModelPortal:P61480
STRING:P61480 PRIDE:P61480 Ensembl:ENSRNOT00000023463 GeneID:363237
KEGG:rno:363237 UCSC:RGD:735072 InParanoid:P61480 NextBio:682950
Genevestigator:P61480 GermOnline:ENSRNOG00000017340 Uniprot:P61480
Length = 423
Score = 155 (59.6 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 42/123 (34%), Positives = 56/123 (45%)
Query: 278 GHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLAS 337
GH ++ + WS ++D S S D + +WD G L S N N IS++ L
Sbjct: 255 GHTEAISSVLWS--DADEVCSASWDHTVRVWDVESG--GLKSTLTGNKVFNCISYSPLCK 310
Query: 338 CLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLT 397
LASGS D + D R K G V H VTS++WSP L S DN +
Sbjct: 311 -RLASGSTDRHIRLWDPRT-KDGSLVSLSLTSHTGWVTSVKWSPTHDQQLISGSLDNMVK 368
Query: 398 IWD 400
+WD
Sbjct: 369 LWD 371
Score = 143 (55.4 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 35/112 (31%), Positives = 53/112 (47%)
Query: 239 IDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFAS 298
I ++P+ RL SG + I LW+P + V + H V ++WSPT S
Sbjct: 303 ISYSPLCK-RLASGSTDRHIRLWDPRTKDGSLVSLS-LTSHTGWVTSVKWSPTHDQQLIS 360
Query: 299 CSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFS 350
S+D + +WDTR K+ L AH V + W LL+ G+D+ +S
Sbjct: 361 GSLDNMVKLWDTRSCKAPLYDLAAHEDKVLSVDWTD-TGLLLSGGADNKLYS 411
Score = 121 (47.7 bits), Expect = 0.00023, P = 0.00023
Identities = 56/240 (23%), Positives = 95/240 (39%)
Query: 168 HQGCVNRIRAMSQNPHICA-SWADTGHVQVWDFRSHLNALAESETVAGHGAPQV------ 220
H G V+ I S C+ SW +++W S + E E P+
Sbjct: 188 HAGSVDAIAVDSSGTKFCSGSWDKM--LKIW---STVPTDEEDEIQEPTNRPRKKQKTEQ 242
Query: 221 --LNQSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIG 278
L ++PLV GH + ++ W+ + S + + +W+ S + G
Sbjct: 243 LGLTRTPLVTLSGHTEAISSVLWSDA--DEVCSASWDHTVRVWDVESGGL----KSTLTG 296
Query: 279 HAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFK--AHNADVNVISWNRLA 336
+ + +SP + AS S D +I +WD R +L+S +H V + W+
Sbjct: 297 NKV-FNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTH 354
Query: 337 SCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQL 396
L SGS D + D R K + + H+ V S++W+ + L ADN+L
Sbjct: 355 DQQLISGSLDNMVKLWDTRSCK---APLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKL 409
>FB|FBgn0046222 [details] [associations]
symbol:CG1109 species:7227 "Drosophila melanogaster"
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:Q04724
GeneTree:ENSGT00540000070914 KO:K15542 EMBL:AY051695
RefSeq:NP_730982.1 RefSeq:NP_730983.1 UniGene:Dm.4508 SMR:Q9VNG2
STRING:Q9VNG2 EnsemblMetazoa:FBtr0078713 EnsemblMetazoa:FBtr0078714
GeneID:40698 KEGG:dme:Dmel_CG1109 UCSC:CG1109-RA
FlyBase:FBgn0046222 InParanoid:Q9VNG2 OMA:TLRIWDF OrthoDB:EOG49ZW47
GenomeRNAi:40698 NextBio:820117 Uniprot:Q9VNG2
Length = 807
Score = 159 (61.0 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 49/183 (26%), Positives = 80/183 (43%)
Query: 222 NQSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAA 281
N + + + HK+ I ++P + VSG + + +W D + GH A
Sbjct: 218 NMNNVKMYQAHKEAIRGISFSPT-DSKFVSGSDDGTLRIW----DFMRCQEERVLRGHGA 272
Query: 282 SVEDLQWSPTESDVFASCSVDGN--IAIWDTRVGKSALMSFKAHNADVNVISWNRLASCL 339
V+ + W P + + S S D I IWD + G AL + AH + V + WN + L
Sbjct: 273 DVKCVHWHP-QKGMIVSGSKDNQQPIKIWDPKSG-IALATLHAHKSTVMDLKWNDNGNWL 330
Query: 340 LASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSP-HEGSTLAVSSADNQLTI 398
+ + S D + D+R L+ V F HK +S+ W P HEG +D +
Sbjct: 331 VTA-SRDHLLKLFDIRNLR---EEVQVFRGHKKEASSVSWHPIHEG-LFCSGGSDGSILF 385
Query: 399 WDL 401
W++
Sbjct: 386 WNV 388
Score = 143 (55.4 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 43/172 (25%), Positives = 75/172 (43%)
Query: 231 GHKDEGYAIDWNPVAPGRLVSG--DCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQW 288
GH + + W+P G +VSG D I +W+P S + H ++V DL+W
Sbjct: 269 GHGADVKCVHWHP-QKGMIVSGSKDNQQPIKIWDPKS----GIALATLHAHKSTVMDLKW 323
Query: 289 SPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGT 348
+ + + S D + ++D R + + F+ H + + +SW+ + L SG DG+
Sbjct: 324 NDN-GNWLVTASRDHLLKLFDIRNLREEVQVFRGHKKEASSVSWHPIHEGLFCSGGSDGS 382
Query: 349 FSIHDLRLLKGGDSVVAHFEY-HKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
++ G D + E H V ++ W P G L S D+ + W
Sbjct: 383 ILFWNV----GTDKEIGCVETAHDSIVWTLAWHPL-GHILCSGSNDHTIKFW 429
Score = 120 (47.3 bits), Expect = 0.00075, P = 0.00075
Identities = 57/242 (23%), Positives = 95/242 (39%)
Query: 237 YAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVF 296
+ + W P RLV+G + LW + T+N + H SV + WS +S +
Sbjct: 150 FTLAWTPEGR-RLVTGASSGEFTLW---NGLTFNFE-TILQAHDISVRTMVWSHNDSWMV 204
Query: 297 ASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDL-- 354
G + W + + + ++AH + IS++ S + SGSDDGT I D
Sbjct: 205 TG-DHGGYVKYWQSNMNNVKM--YQAHKEAIRGISFSPTDSKFV-SGSDDGTLRIWDFMR 260
Query: 355 ----RLLKG--GDSVVAHFEYHKHPVTS--------IE-WSPHEGSTLAVSSADNQLTIW 399
R+L+G D H+ K + S I+ W P G LA A ++ T+
Sbjct: 261 CQEERVLRGHGADVKCVHWHPQKGMIVSGSKDNQQPIKIWDPKSGIALATLHA-HKSTVM 319
Query: 400 DLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQKDLKELHWHTQVPGMIVSTAA 459
DL ++ +L ++ +K+ + WH G+ S +
Sbjct: 320 DLKWNDNGNWLVTASRDHLLKLFDIRNLREEVQVFRGHKKEASSVSWHPIHEGLFCSGGS 379
Query: 460 DG 461
DG
Sbjct: 380 DG 381
>UNIPROTKB|B3RNR8 [details] [associations]
symbol:TRIADDRAFT_20668 "Probable cytosolic iron-sulfur
protein assembly protein" species:10228 "Trichoplax adhaerens"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:DS985242
RefSeq:XP_002109895.1 ProteinModelPortal:B3RNR8 STRING:B3RNR8
EnsemblMetazoa:TriadT20668 GeneID:6751110 KEGG:tad:TRIADDRAFT_20668
Uniprot:B3RNR8
Length = 313
Score = 152 (58.6 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 44/178 (24%), Positives = 81/178 (45%)
Query: 232 HKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPT 291
H + + W+P LVS ++ I +++ D W + IGH ++V L + +
Sbjct: 134 HSQDVKHVVWSP-KENALVSASYDNTIKIYKEVDD-DWECS-HTLIGHESTVWSLSFH-S 189
Query: 292 ESDVFASCSVDGNIAIWDT-RVGKS-----ALMSFKA-HNADVNVISWNRLASCLLASGS 344
++F SC D + IW + G S ++ + HN + + W++L + + +
Sbjct: 190 SGELFVSCGDDKVLKIWKCLKSGPSDVKWISICTIAGYHNRPIYDVDWSKLNNKIATACG 249
Query: 345 DDGT--FSIHDLRLLKGGDSV-VAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
DD FSI + + + +A+++ H H V + W P + LA S DN + IW
Sbjct: 250 DDAIRIFSIVRITISISNQLLFIAYYQAHNHDVNVVRWHPKVDNILASGSDDNCIKIW 307
Score = 140 (54.3 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 40/144 (27%), Positives = 62/144 (43%)
Query: 258 IHLWEPASDAT-WNVDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSA 316
I +W SD+ W GH ++ + WSP + ASCS D I IW + G
Sbjct: 22 IRIWAKNSDSDQWTCKSILTEGHTRTIRSVAWSPC-GNYLASCSFDATICIWSKKDGDFE 80
Query: 317 LMS-FKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVT 375
M+ + H +V ++W+ + LAS S D + I + + H V
Sbjct: 81 CMATLEGHENEVKCVNWSS-SGVYLASCSRDKSAWIWEFIEEDEEYECASVLTDHSQDVK 139
Query: 376 SIEWSPHEGSTLAVSSADNQLTIW 399
+ WSP E + L +S DN + I+
Sbjct: 140 HVVWSPKENA-LVSASYDNTIKIY 162
>UNIPROTKB|Q2HJ56 [details] [associations]
symbol:PWP1 "Periodic tryptophan protein 1 homolog"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BC113302 IPI:IPI00691154 RefSeq:NP_001039631.1
UniGene:Bt.12659 ProteinModelPortal:Q2HJ56 STRING:Q2HJ56
PRIDE:Q2HJ56 Ensembl:ENSBTAT00000006109 GeneID:514147
KEGG:bta:514147 CTD:11137 GeneTree:ENSGT00390000017324
HOGENOM:HOG000212580 HOVERGEN:HBG001543 InParanoid:Q2HJ56 KO:K14791
OMA:RGVAKET OrthoDB:EOG4STS4J NextBio:20871193 Uniprot:Q2HJ56
Length = 500
Score = 156 (60.0 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 40/171 (23%), Positives = 72/171 (42%)
Query: 231 GHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSP 290
GH D + WN + L S ++ + LW D + H V+ LQ+ P
Sbjct: 253 GHTDAVLDLSWNKLVRNVLASASADNTVILW----DMSLGKPAASLAVHTDKVQTLQFHP 308
Query: 291 TESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFS 350
E+ S S D ++A++D R + + ++ + + ++WN + C + +DDG
Sbjct: 309 FEAQTLISGSYDKSVALYDCRSPEESHRMWR-FSGQIERVTWNHFSPCHFLASTDDGFVY 367
Query: 351 IHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDL 401
D R D + H ++ ++ S L +SAD + IWD+
Sbjct: 368 NLDAR----SDKPIFTLNAHNDEISGLDLSSQIKGCLVTASADKYVKIWDI 414
>UNIPROTKB|B3KPW7 [details] [associations]
symbol:ERCC8 "DNA excision repair protein ERCC-8"
species:9606 "Homo sapiens" [GO:0009411 "response to UV"
evidence=IEA] [GO:0010165 "response to X-ray" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0009411 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010165
HOVERGEN:HBG005409 UniGene:Hs.435237 HGNC:HGNC:3439 EMBL:AC022445
EMBL:AC104113 EMBL:AK056931 IPI:IPI01015409 SMR:B3KPW7
STRING:B3KPW7 Ensembl:ENST00000426742 Uniprot:B3KPW7
Length = 338
Score = 152 (58.6 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 36/126 (28%), Positives = 68/126 (53%)
Query: 279 HAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSA-LMSFK--AHNADVNVISWNRL 335
H SVE +QW P ++ +F S S D + +WDT ++A + +F+ ++ ++ +S
Sbjct: 40 HRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKH- 98
Query: 336 ASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQ 395
CL+A G+ + DL+ G S + + H+ + ++ WSP LA +SAD++
Sbjct: 99 --CLVAVGTRGPKVQLCDLK--SGSCSHI--LQGHRQEILAVSWSPRYDYILATASADSR 152
Query: 396 LTIWDL 401
+ +WD+
Sbjct: 153 VKLWDV 158
>ZFIN|ZDB-GENE-040426-1192 [details] [associations]
symbol:tbl1xr1 "transducin (beta)-like 1 X-linked
receptor 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040426-1192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
EMBL:CT027646 IPI:IPI00854144 Ensembl:ENSDART00000085132
Bgee:F1Q5U2 Uniprot:F1Q5U2
Length = 511
Score = 155 (59.6 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 53/181 (29%), Positives = 85/181 (46%)
Query: 230 GGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWS 289
G HK +A+ WN L +G + I +W DA F H+A D+ W
Sbjct: 259 GQHKGPIFALKWNKKGNFILSAGVDKTTI-IW----DAHTGEAKQQFPFHSAPALDVDWQ 313
Query: 290 PTESDVFASCSVDGNIAIWDTRVGKSA-LMSFKAHNADVNVISWNRLASCLLASGSDDGT 348
++ FASCS D + I ++G+ + +F+ H +VN I W+ + LLAS SDD T
Sbjct: 314 --SNNTFASCSTD--MCIHVCKLGQERPIKTFQGHTNEVNAIKWDPTGN-LLASCSDDMT 368
Query: 349 FSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGST--------LAVSSA-DNQLTIW 399
+ ++ D+ V + H + +I+WSP T LA S++ D+ + +W
Sbjct: 369 LKLWSMKQ----DTCVHDLQAHSKEIYTIKWSPTGPGTNNPNANLMLARSASFDSTVRLW 424
Query: 400 D 400
D
Sbjct: 425 D 425
Score = 128 (50.1 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 44/173 (25%), Positives = 73/173 (42%)
Query: 231 GHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNV----------DPNPFIGHA 280
GH+ E + WNPV+ L SG +S +W + +T + +
Sbjct: 163 GHESEVFICAWNPVSD-LLASGSGDSTARIWNLSESSTGGSTQLVLRHCIREGGQDVPSN 221
Query: 281 ASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLL 340
V L W+ +E + A+ S DG IW T+ G A + H + + WN+ + +L
Sbjct: 222 KDVTSLDWN-SEGTLLATGSYDGFARIW-TKDGNLA-STLGQHKGPIFALKWNKKGNFIL 278
Query: 341 ASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSAD 393
++G D T I D G++ F +H P ++W + +T A S D
Sbjct: 279 SAGVDKTTI-IWDAHT---GEAK-QQFPFHSAPALDVDWQSN--NTFASCSTD 324
>UNIPROTKB|E1C100 [details] [associations]
symbol:ERCC8 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000109 "nucleotide-excision repair complex"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IEA] [GO:0006979 "response to
oxidative stress" evidence=IEA] [GO:0009411 "response to UV"
evidence=IEA] [GO:0010165 "response to X-ray" evidence=IEA]
[GO:0016363 "nuclear matrix" evidence=IEA] [GO:0031464 "Cul4A-RING
ubiquitin ligase complex" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045739 "positive regulation of DNA repair" evidence=IEA]
[GO:0051865 "protein autoubiquitination" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0009411 GO:GO:0006979 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004842 GO:GO:0016363
GO:GO:0000209 GO:GO:0010165 GO:GO:0045739 GO:GO:0051865
GO:GO:0006283 KO:K10570 GO:GO:0031464 GO:GO:0000109 CTD:1161
GeneTree:ENSGT00390000009065 OMA:TMLRGHY EMBL:AADN02045784
EMBL:AADN02045777 EMBL:AADN02045778 EMBL:AADN02045779
EMBL:AADN02045780 EMBL:AADN02045781 EMBL:AADN02045782
EMBL:AADN02045783 IPI:IPI00574117 RefSeq:XP_424742.1
UniGene:Gga.11058 ProteinModelPortal:E1C100
Ensembl:ENSGALT00000023755 GeneID:427153 KEGG:gga:427153
NextBio:20828454 Uniprot:E1C100
Length = 399
Score = 153 (58.9 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 38/124 (30%), Positives = 63/124 (50%)
Query: 279 HAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSA-LMSFKAHNADVNVISWNRLAS 337
H SVE +QW P ++ +F S S D + IWDT + A + F+ + +S
Sbjct: 98 HKFSVETVQWYPHDTGMFTSSSFDKTLKIWDTNTLQPADVFQFEG-TVYSHHMSPVATKH 156
Query: 338 CLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLT 397
CL+A G+ + DL+ G S + + H+ V ++ WSP LA +SAD+++
Sbjct: 157 CLIAVGTKSPKVQLCDLK--SGSCSHI--LQGHRQEVLAVSWSPRHEYVLATASADSKVK 212
Query: 398 IWDL 401
+WD+
Sbjct: 213 LWDV 216
>SGD|S000002535 [details] [associations]
symbol:MTC5 "Subunit of the SEA (Seh1-associated) complex"
species:4932 "Saccharomyces cerevisiae" [GO:0000329 "fungal-type
vacuole membrane" evidence=IDA] [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005774 "vacuolar membrane" evidence=IEA] [GO:0035859
"Seh1-associated complex" evidence=IDA] [GO:0097042 "extrinsic to
fungal-type vacuolar membrane" evidence=IDA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0005773 "vacuole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006575 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50908 SMART:SM00320 SMART:SM00591
SGD:S000002535 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 eggNOG:COG2319 EMBL:BK006938
EMBL:Z48179 GO:GO:0097042 GO:GO:0035859
GeneTree:ENSGT00650000093352 OMA:INPSGRD OrthoDB:EOG43BQX2
PIR:S51855 RefSeq:NP_010413.3 RefSeq:NP_010417.3
ProteinModelPortal:Q03897 SMR:Q03897 DIP:DIP-1825N IntAct:Q03897
MINT:MINT-402415 STRING:Q03897 PaxDb:Q03897 PeptideAtlas:Q03897
EnsemblFungi:YDR128W GeneID:851706 GeneID:851710 KEGG:sce:YDR128W
KEGG:sce:YDR132C CYGD:YDR128w NextBio:969389 Genevestigator:Q03897
GermOnline:YDR128W Uniprot:Q03897
Length = 1148
Score = 159 (61.0 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 45/166 (27%), Positives = 75/166 (45%)
Query: 239 IDWNP--VAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVF 296
+ W+P P +VS I +W A ++ N GH+ ++ D+ ++P DV
Sbjct: 73 VQWSPHPAKPYWIVSTSNQKAI-IWNLAKSSS-NAIEFVLHGHSRAITDINFNPQHPDVL 130
Query: 297 ASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRL 356
A+CSVD + WD R S + + + + WN +LAS + F + DLR
Sbjct: 131 ATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASSHGNDIF-VWDLRK 189
Query: 357 LKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLS 402
G + + + H V SI+++ + S + SS D + WD S
Sbjct: 190 ---GSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYS 232
Score = 135 (52.6 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 37/123 (30%), Positives = 58/123 (47%)
Query: 231 GHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSP 290
GH I++NP P L + ++ +H W+ S + + A+ V+ W+
Sbjct: 112 GHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVK---WNY 168
Query: 291 TESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFS 350
+ +V AS S +I +WD R G + L S K H + VN I +NR + S S+DGT
Sbjct: 169 KDPNVLAS-SHGNDIFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVK 227
Query: 351 IHD 353
D
Sbjct: 228 FWD 230
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 154 (59.3 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 65/260 (25%), Positives = 108/260 (41%)
Query: 159 PILQLRKVAHQGCVNRIRAMSQNPHIC-ASWADTGHVQVWDFRSHLNA---LAESETVAG 214
P+L+ H+ + + + ASW DT + +W+F+ H A + + V
Sbjct: 8 PVLERYFKGHKAAITSLDLSPNGKQLATASW-DT-FLMLWNFKPHARAYRYVGHKDVVTS 65
Query: 215 -----HGAPQV-LNQSPLVKFGGHKDEGYAIDWNP-VAPGRLV--SGDCNSCIHLWEPAS 265
HG ++ V+ G ++ AP R V S D E S
Sbjct: 66 VQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKS 125
Query: 266 DATWNVDPNPFI----GHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFK 321
W++ F+ H V ++SP + + SCS D I IWDT K + +F
Sbjct: 126 IKVWSMYRQRFLYSLYRHTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDT-TNKQCVNNFS 183
Query: 322 AHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSP 381
N + +N +C+ ++GSD T + D+R+ K ++ H++ H V I + P
Sbjct: 184 DSVGFANFVDFNPSGTCIASAGSDQ-TVKVWDVRVNK----LLQHYQVHSGGVNCISFHP 238
Query: 382 HEGSTLAVSSADNQLTIWDL 401
G+ L +S+D L I DL
Sbjct: 239 -SGNYLITASSDGTLKILDL 257
Score = 146 (56.5 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 55/215 (25%), Positives = 100/215 (46%)
Query: 247 GRL-VSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNI 305
GRL VS + I +W+ + N + + +G A V+ ++P+ + + AS D +
Sbjct: 156 GRLIVSCSEDKTIKIWDTTNKQCVN-NFSDSVGFANFVD---FNPSGTCI-ASAGSDQTV 210
Query: 306 AIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVA 365
+WD RV K L ++ H+ VN IS++ + L+ + SD GT I DL L+G ++
Sbjct: 211 KVWDVRVNK-LLQHYQVHSGGVNCISFHPSGNYLITASSD-GTLKILDL--LEG--RLIY 264
Query: 366 HFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLSLXXXXXXXXXXXXXTREQVNAPE 425
+ H PV ++ +S G A AD Q+ +W + R ++P
Sbjct: 265 TLQGHTGPVFTVSFSKG-GELFASGGADTQVLLWRTNFDELHCKGLTKRNLKRLHFDSPP 323
Query: 426 ---DLPPQLLFIHQGQKDLKELHWHTQVPGMIVST 457
D+ P+ H+ + + E++ +V + +ST
Sbjct: 324 HLLDIYPRTPHPHEEKVETVEINPKLEVIDLQIST 358
>UNIPROTKB|Q0VC24 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9913 "Bos taurus" [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS] [GO:0008283
"cell proliferation" evidence=ISS] [GO:0000466 "maturation of 5.8S
rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
[GO:0005730 "nucleolus" evidence=ISS] [GO:0007219 "Notch signaling
pathway" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
HAMAP:MF_03029 EMBL:BT029892 EMBL:BC120386 EMBL:BC142121
IPI:IPI00725024 RefSeq:NP_001069375.1 UniGene:Bt.42368
ProteinModelPortal:Q0VC24 STRING:Q0VC24 Ensembl:ENSBTAT00000020499
GeneID:528209 KEGG:bta:528209 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 InParanoid:Q0VC24
OrthoDB:EOG4V6ZGM NextBio:20874770 Uniprot:Q0VC24
Length = 423
Score = 153 (58.9 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 43/123 (34%), Positives = 55/123 (44%)
Query: 278 GHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLAS 337
GH ++ + WS E S S D I +WD G +L S N N IS++ L
Sbjct: 255 GHKEAISSVLWSDAEE--ICSASWDHTIKVWDVESG--SLKSTLTGNKVFNCISYSPLCK 310
Query: 338 CLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLT 397
LASGS D + D R K G V H VTS++WSP L S DN +
Sbjct: 311 -RLASGSTDRHIRLWDPRT-KDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNMVK 368
Query: 398 IWD 400
+WD
Sbjct: 369 LWD 371
Score = 144 (55.7 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 35/112 (31%), Positives = 54/112 (48%)
Query: 239 IDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFAS 298
I ++P+ RL SG + I LW+P + V + H V ++WSPT S
Sbjct: 303 ISYSPLCK-RLASGSTDRHIRLWDPRTKDGSLVSLS-LTSHTGWVTSVKWSPTHEQQLIS 360
Query: 299 CSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFS 350
S+D + +WDTR K+ L AH V + W + LL+ G+D+ +S
Sbjct: 361 GSLDNMVKLWDTRSCKAPLYDLAAHEDKVLSVDWTD-SGLLLSGGADNKLYS 411
Score = 130 (50.8 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 56/237 (23%), Positives = 97/237 (40%)
Query: 168 HQGCVNRIRAMSQNPHICA-SWADTGHVQVWDF--RSHLNALAESETVAG--HGAPQV-L 221
H G V+ I S C+ SW +++W + + ES Q+ L
Sbjct: 188 HAGSVDSIAVDSTGTKFCSGSWDKM--LKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGL 245
Query: 222 NQSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAA 281
++P+V GHK+ ++ W+ + S + I +W+ S + + G+
Sbjct: 246 TRTPIVTLSGHKEAISSVLWSDAE--EICSASWDHTIKVWDVESGSL----KSTLTGNKV 299
Query: 282 SVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFK--AHNADVNVISWNRLASCL 339
+ +SP + AS S D +I +WD R +L+S +H V + W+
Sbjct: 300 -FNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 357
Query: 340 LASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQL 396
L SGS D + D R K + + H+ V S++W+ + L ADN+L
Sbjct: 358 LISGSLDNMVKLWDTRSCK---APLYDLAAHEDKVLSVDWT--DSGLLLSGGADNKL 409
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 154 (59.3 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 46/152 (30%), Positives = 72/152 (47%)
Query: 248 RLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNIAI 307
RLVS + + LW+P +T + GH V +SP + A+ S D ++ +
Sbjct: 360 RLVSASDDLQLILWDPQK-STKPI--TKMHGHQKVVNHASFSP-DGRCIATASFDSSVRL 415
Query: 308 WDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHF 367
WD + GK L + + H A V +W+ S LL S S D T + D+R K +
Sbjct: 416 WDGKTGKF-LATLRGHVAAVYQCAWST-DSRLLVSSSQDTTLKVWDVRSKK----MKFDL 469
Query: 368 EYHKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
H+ V +++WSP +G +A AD + IW
Sbjct: 470 PGHEDQVFAVDWSP-DGQRVASGGADKAVRIW 500
Score = 148 (57.2 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 45/176 (25%), Positives = 73/176 (41%)
Query: 231 GHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSP 290
GH + ++P RLV+G + LW D GH V + W+P
Sbjct: 132 GHDGTIISAQFSPSTSSRLVTGSGDFTARLW----DCDTQTPIATMKGHTNWVSCVAWAP 187
Query: 291 TESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRL------ASCLLASGS 344
++ + A+ S+D I WD + G + + H + + W L LLASGS
Sbjct: 188 -DASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGS 246
Query: 345 DDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWD 400
D T I +++L +++ H P+T + W + + SS D + IWD
Sbjct: 247 KDNTVRIWNVKLR----TLLFTLSGHTAPITCVRWGGQ--NWIYSSSYDKTIRIWD 296
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 38/132 (28%), Positives = 61/132 (46%)
Query: 278 GHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLAS 337
GH ++ Q+SP+ S + S D +WD ++ + + K H V+ ++W AS
Sbjct: 132 GHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDT-QTPIATMKGHTNWVSCVAWAPDAS 190
Query: 338 CLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSP-H----EGSTLAVS-S 391
++A+GS D T D K G + H P+ ++ W P H G L S S
Sbjct: 191 -IIATGSMDNTIRFWDP---KKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGS 246
Query: 392 ADNQLTIWDLSL 403
DN + IW++ L
Sbjct: 247 KDNTVRIWNVKL 258
>POMBASE|SPBC1711.16 [details] [associations]
symbol:SPBC1711.16 "WD repeat protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0043234 "protein complex" evidence=NAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1711.16 GO:GO:0005829
GO:GO:0043234 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006364 HOGENOM:HOG000212580 KO:K14791
OMA:RGVAKET eggNOG:NOG290487 OrthoDB:EOG4DNJCV RefSeq:NP_595889.1
ProteinModelPortal:Q9P775 STRING:Q9P775 EnsemblFungi:SPBC1711.16.1
GeneID:2539789 KEGG:spo:SPBC1711.16 NextBio:20800938 Uniprot:Q9P775
Length = 516
Score = 154 (59.3 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 57/212 (26%), Positives = 94/212 (44%)
Query: 194 VQVWDFRSHLNALAESETVAGHGAPQV---LNQSPLVKFGGHKDEGYAIDWNPVAPGRLV 250
+++WD ++A+ + V G GA QV +S + H D A+ N A LV
Sbjct: 214 IEIWDL-DIIDAVYPA-AVLGAGASQVNKKKKKSKKINDSYHTDAVLALSSNRNAHNLLV 271
Query: 251 SGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNIAIWDT 310
SG ++ + LW+ + T N + F H+ V L W V S S D I D
Sbjct: 272 SGSADTTLKLWDLS---TCNCVKS-FTYHSDKVSCLDWYSKAPSVLLSGSYDKTAKIADL 327
Query: 311 RVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYH 370
R+ + A SF+ +DV ++W++ + G+D+G D R L V + H
Sbjct: 328 RL-EEAPSSFQV-TSDVENVAWDQHSENNFFIGTDNGIVYYCDARNLSKS---VWQLQAH 382
Query: 371 KHPVTSIEWSPHEGSTLAVSSADNQLTIWDLS 402
P++ + +P S +A S D + +W+ S
Sbjct: 383 DGPISCLSVNPSVPSFVATGSTDRVVKLWNTS 414
>UNIPROTKB|Q13216 [details] [associations]
symbol:ERCC8 "DNA excision repair protein ERCC-8"
species:9606 "Homo sapiens" [GO:0010165 "response to X-ray"
evidence=IEA] [GO:0006289 "nucleotide-excision repair"
evidence=IMP;TAS] [GO:0006979 "response to oxidative stress"
evidence=IDA;IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0043234 "protein complex" evidence=IDA] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0009411 "response to UV"
evidence=IMP;IDA] [GO:0045739 "positive regulation of DNA repair"
evidence=IMP] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IDA;IMP;TAS] [GO:0003678 "DNA
helicase activity" evidence=IDA] [GO:0032403 "protein complex
binding" evidence=IDA] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IDA] [GO:0031464 "Cul4A-RING ubiquitin
ligase complex" evidence=IDA] [GO:0000109 "nucleotide-excision
repair complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0016363 "nuclear matrix" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006281 "DNA repair" evidence=TAS]
Reactome:REACT_216 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0009411 GO:GO:0005654
GO:GO:0006979 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0032403 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471123 GO:GO:0016363
GO:GO:0000209 GO:GO:0010165 GO:GO:0045739 GO:GO:0051865
GO:GO:0006283 HOGENOM:HOG000248233 KO:K10570 GO:GO:0031464 PDB:4A11
PDBsum:4A11 GO:GO:0000109 Orphanet:90321 Orphanet:90322
Orphanet:90324 Orphanet:178338 CTD:1161 HOVERGEN:HBG005409
OMA:TMLRGHY EMBL:U28413 EMBL:CR536563 EMBL:BT020021 EMBL:AY213194
EMBL:AK314511 EMBL:BC009793 IPI:IPI00012284 IPI:IPI00386696
PIR:A57090 RefSeq:NP_000073.1 UniGene:Hs.435237
ProteinModelPortal:Q13216 SMR:Q13216 DIP:DIP-291N IntAct:Q13216
MINT:MINT-1417899 STRING:Q13216 PhosphoSite:Q13216 DMDM:3121917
PRIDE:Q13216 DNASU:1161 Ensembl:ENST00000265038 GeneID:1161
KEGG:hsa:1161 UCSC:uc003jsl.3 UCSC:uc003jsn.3 GeneCards:GC05M060169
H-InvDB:HIX0004887 HGNC:HGNC:3439 MIM:216400 MIM:609412 MIM:614621
neXtProt:NX_Q13216 PharmGKB:PA27853 InParanoid:Q13216
OrthoDB:EOG4SN1NR PhylomeDB:Q13216 GenomeRNAi:1161 NextBio:4822
ArrayExpress:Q13216 Bgee:Q13216 CleanEx:HS_ERCC8
Genevestigator:Q13216 GermOnline:ENSG00000049167 Uniprot:Q13216
Length = 396
Score = 152 (58.6 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 36/126 (28%), Positives = 68/126 (53%)
Query: 279 HAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSA-LMSFK--AHNADVNVISWNRL 335
H SVE +QW P ++ +F S S D + +WDT ++A + +F+ ++ ++ +S
Sbjct: 98 HRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKH- 156
Query: 336 ASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQ 395
CL+A G+ + DL+ G S + + H+ + ++ WSP LA +SAD++
Sbjct: 157 --CLVAVGTRGPKVQLCDLK--SGSCSHI--LQGHRQEILAVSWSPRYDYILATASADSR 210
Query: 396 LTIWDL 401
+ +WD+
Sbjct: 211 VKLWDV 216
>UNIPROTKB|H0Y711 [details] [associations]
symbol:WDR77 "Methylosome protein 50" species:9606 "Homo
sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005794
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AL390195 HGNC:HGNC:29652
ProteinModelPortal:H0Y711 PRIDE:H0Y711 Ensembl:ENST00000449340
Bgee:H0Y711 Uniprot:H0Y711
Length = 291
Score = 149 (57.5 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 47/164 (28%), Positives = 76/164 (46%)
Query: 222 NQSPLV-KFGGHKDEGYAIDWNPVAPG-RLVSGDCNSCIHLWEPASDATWNVDPNPFIGH 279
N++ +V KF ++ + + ++ G + VSG + CI +W+ A + + H
Sbjct: 48 NETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLS----SYRAH 103
Query: 280 AASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSAL-MSFKAHNADVNVISWNRLASC 338
AA V + SP + VF SCS D I +WDTR K A + A ++W+ S
Sbjct: 104 AAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSE 163
Query: 339 LLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPH 382
+ G ++GT S+ D + S V H VT + +SPH
Sbjct: 164 VFVFGDENGTVSLVDTK----STSCVLSSAVHSQCVTGLVFSPH 203
>MGI|MGI:1919241 [details] [associations]
symbol:Ercc8 "excision repaiross-complementing rodent repair
deficiency, complementation group 8" species:10090 "Mus musculus"
[GO:0000109 "nucleotide-excision repair complex" evidence=ISO]
[GO:0000209 "protein polyubiquitination" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006283 "transcription-coupled nucleotide-excision repair"
evidence=ISO] [GO:0006289 "nucleotide-excision repair"
evidence=ISO] [GO:0006974 "response to DNA damage stimulus"
evidence=ISO] [GO:0006979 "response to oxidative stress"
evidence=ISO] [GO:0009411 "response to UV" evidence=ISO;IMP]
[GO:0010165 "response to X-ray" evidence=IMP] [GO:0016363 "nuclear
matrix" evidence=ISO] [GO:0031464 "Cul4A-RING ubiquitin ligase
complex" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0043234 "protein complex"
evidence=ISO] [GO:0045739 "positive regulation of DNA repair"
evidence=ISO] [GO:0051865 "protein autoubiquitination"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 MGI:MGI:1919241 GO:GO:0009411
GO:GO:0006979 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004842 GO:GO:0016363
GO:GO:0000209 GO:GO:0010165 GO:GO:0045739 GO:GO:0051865
GO:GO:0006283 HOGENOM:HOG000248233 KO:K10570 GO:GO:0031464
GO:GO:0000109 CTD:1161 GeneTree:ENSGT00390000009065
HOVERGEN:HBG005409 OMA:TMLRGHY OrthoDB:EOG4SN1NR EMBL:AJ427222
EMBL:AK010576 EMBL:AK157175 EMBL:BC037200 IPI:IPI00311474
RefSeq:NP_082318.2 UniGene:Mm.212208 ProteinModelPortal:Q8CFD5
SMR:Q8CFD5 STRING:Q8CFD5 PhosphoSite:Q8CFD5 PRIDE:Q8CFD5
Ensembl:ENSMUST00000054835 GeneID:71991 KEGG:mmu:71991
UCSC:uc007rux.1 InParanoid:Q8CFD5 NextBio:335154 Bgee:Q8CFD5
Genevestigator:Q8CFD5 GermOnline:ENSMUSG00000021694 Uniprot:Q8CFD5
Length = 397
Score = 152 (58.6 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 36/124 (29%), Positives = 65/124 (52%)
Query: 279 HAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSA-LMSFKAHNADVNVISWNRLAS 337
H SVE +QW P ++ +F S S D + +WDT ++A + +F+ + +S
Sbjct: 98 HKYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQAADVFNFE-ETVYSHHMSPAATKH 156
Query: 338 CLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLT 397
CL+A G+ + DL+ G S + + H+ + ++ WSP LA +SAD+++
Sbjct: 157 CLVAVGTRGPKVQLCDLK--SGSCSHI--LQGHRQEILAVSWSPRHDYILATASADSRVK 212
Query: 398 IWDL 401
+WD+
Sbjct: 213 LWDV 216
>UNIPROTKB|Q12834 [details] [associations]
symbol:CDC20 "Cell division cycle protein 20 homolog"
species:9606 "Homo sapiens" [GO:0051301 "cell division"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0040020 "regulation of meiosis" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050773
"regulation of dendrite development" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0051488 "activation of anaphase-promoting complex activity"
evidence=IDA] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA;TAS]
[GO:0005680 "anaphase-promoting complex" evidence=IDA] [GO:0090129
"positive regulation of synapse maturation" evidence=ISS]
[GO:0031915 "positive regulation of synaptic plasticity"
evidence=ISS] [GO:0005819 "spindle" evidence=TAS] [GO:0007049 "cell
cycle" evidence=TAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0007094 "mitotic spindle assembly checkpoint" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] Reactome:REACT_6850 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 UniPathway:UPA00143 GO:GO:0005829
GO:GO:0005813 GO:GO:0048471 Reactome:REACT_6900
Reactome:REACT_115566 GO:GO:0043234 GO:GO:0005654
Reactome:REACT_21300 GO:GO:0051301 GO:GO:0007094 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
EMBL:CH471059 GO:GO:0008284 eggNOG:COG2319 GO:GO:0016567
GO:GO:0051436 GO:GO:0050773 GO:GO:0000922 Reactome:REACT_8017
GO:GO:0031145 GO:GO:0090129 GO:GO:0031915 GO:GO:0051437
GO:GO:0040020 GO:GO:0000236 PDB:4GGD PDBsum:4GGD GO:GO:0051488
KO:K03363 EMBL:U05340 EMBL:AF099644 EMBL:AK312780 EMBL:BT007388
EMBL:DQ473545 EMBL:AL139289 EMBL:BC000624 EMBL:BC001088
EMBL:BC006272 EMBL:BC009425 EMBL:BC009426 EMBL:BC010044
EMBL:BC012803 EMBL:BC012827 EMBL:BC013303 EMBL:BC015998
EMBL:BC024257 EMBL:BC031294 EMBL:BC110321 IPI:IPI00329526
PIR:A56021 RefSeq:NP_001246.2 UniGene:Hs.524947 PDB:4GGA PDB:4GGC
PDBsum:4GGA PDBsum:4GGC ProteinModelPortal:Q12834 SMR:Q12834
DIP:DIP-29655N IntAct:Q12834 MINT:MINT-2211271 STRING:Q12834
PhosphoSite:Q12834 DMDM:37537762 PaxDb:Q12834 PRIDE:Q12834
DNASU:991 Ensembl:ENST00000310955 Ensembl:ENST00000372462
GeneID:991 KEGG:hsa:991 UCSC:uc001cix.3 CTD:991
GeneCards:GC01P043824 H-InvDB:HIX0034879 HGNC:HGNC:1723
HPA:CAB004525 MIM:603618 neXtProt:NX_Q12834 PharmGKB:PA26257
HOGENOM:HOG000195514 HOVERGEN:HBG001024 InParanoid:Q12834
OMA:RTPGKSN OrthoDB:EOG4CC414 PhylomeDB:Q12834 GenomeRNAi:991
NextBio:4160 PMAP-CutDB:Q12834 ArrayExpress:Q12834 Bgee:Q12834
CleanEx:HS_CDC20 Genevestigator:Q12834 GermOnline:ENSG00000117399
Uniprot:Q12834
Length = 499
Score = 146 (56.5 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 51/174 (29%), Positives = 86/174 (49%)
Query: 231 GHKDEGYAIDWNPVAPGR-LVSGDCNSCIHLWEPA-SDATWNVDPNPFIGHAASVEDLQW 288
GH E + W P GR L SG ++ +++W A + W V F H +V+ + W
Sbjct: 307 GHSQEVCGLRWAP--DGRHLASGGNDNLVNVWPSAPGEGGW-VPLQTFTQHQGAVKAVAW 363
Query: 289 SPTESDVFASC--SVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDD 346
P +S+V A+ + D +I IW+ G + L + AH+ +++ W+ L+ SG
Sbjct: 364 CPWQSNVLATGGGTSDRHIRIWNVCSG-ACLSAVDAHSQVCSIL-WSPHYKELI-SGHG- 419
Query: 347 GTFSIHDLRLLKGGDSV-VAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
F+ + L + K VA + H V S+ SP +G+T+A ++AD L +W
Sbjct: 420 --FAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSP-DGATVASAAADETLRLW 470
Score = 140 (54.3 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 42/161 (26%), Positives = 73/161 (45%)
Query: 239 IDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFAS 298
+DW+ G +++ ++ ++LW +S + G S + W E + A
Sbjct: 190 VDWSS---GNVLAVALDNSVYLWSASSGDILQLLQMEQPGEYIS--SVAWIK-EGNYLAV 243
Query: 299 CSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 358
+ + +WD + K L + +H+A V +SWN S +L+SGS G HD+R+
Sbjct: 244 GTSSAEVQLWDVQQQKR-LRNMTSHSARVGSLSWN---SYILSSGSRSGHIHHHDVRV-- 297
Query: 359 GGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
+ VA H V + W+P +G LA DN + +W
Sbjct: 298 -AEHHVATLSGHSQEVCGLRWAP-DGRHLASGGNDNLVNVW 336
Score = 51 (23.0 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 13/42 (30%), Positives = 25/42 (59%)
Query: 174 RIRAMSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGH 215
R+ ++S N +I +S + +GH+ D R + +A T++GH
Sbjct: 270 RVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVA---TLSGH 308
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 150 (57.9 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 47/172 (27%), Positives = 82/172 (47%)
Query: 231 GHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSP 290
GH E + W+ + RLVS + + +W+ S GH+ V ++P
Sbjct: 79 GHSLEISDVAWSSDS-SRLVSASDDKTLKVWDMRSGKCLKT----LKGHSDFVFCCDFNP 133
Query: 291 TESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFS 350
S++ S S D ++ IW+ + GK L + AH+ ++ +++N S L+ SGS DG
Sbjct: 134 P-SNLIVSGSFDESVKIWEVKTGK-CLKTLSAHSDPISAVNFNCNGS-LIVSGSYDGLCR 190
Query: 351 IHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLS 402
I D G + + PV+ +++SP+ G + ++ DN L +WD S
Sbjct: 191 IWDAA---SGQCLRTLADEGNPPVSFVKFSPN-GKYILTATLDNTLKLWDYS 238
Score = 118 (46.6 bits), Expect = 0.00032, P = 0.00032
Identities = 35/125 (28%), Positives = 66/125 (52%)
Query: 278 GHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLAS 337
GH+A++ +++SP + AS + D I IW G + + H+ +++ ++W+ +S
Sbjct: 37 GHSAAISSVKFSPN-GEWLASSAADALIIIWGAYDG-NCKKTLYGHSLEISDVAWSSDSS 94
Query: 338 CLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVS-SADNQL 396
L+ S SDD T + D+R K ++ H ++ V +++P S L VS S D +
Sbjct: 95 RLV-SASDDKTLKVWDMRSGKCLKTLKGHSDF----VFCCDFNPP--SNLIVSGSFDESV 147
Query: 397 TIWDL 401
IW++
Sbjct: 148 KIWEV 152
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 153 (58.9 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 59/216 (27%), Positives = 100/216 (46%)
Query: 247 GRL-VSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNI 305
GRL VS + I +W+ + N + + F+G A V ++P + + AS D +
Sbjct: 156 GRLIVSCSEDKTIKIWDTTNKQCVN-NFSDFVGFANFVA---FNPNGTCI-ASAGSDHTV 210
Query: 306 AIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVA 365
IWD RV K L ++ H+ VN +S++ + L+ + SD GT I DL L+G ++
Sbjct: 211 KIWDIRVNK-LLQHYQVHSGGVNCVSFHPSGNYLITASSD-GTLKILDL--LEG--RLIY 264
Query: 366 HFEYHKHPVTSIEWSPHEGSTLAVSS-ADNQLTIWDLSLXXXXXXXXXXXXXTREQVNAP 424
+ H PV ++ +S +G L S AD Q+ +W + R ++P
Sbjct: 265 TLQGHTGPVFTVSFS--KGGELFTSGGADAQVLLWRTNFDELNYKDVSKRNLKRLHFDSP 322
Query: 425 E---DLPPQLLFIHQGQKDLKELHWHTQVPGMIVST 457
D+ P+ H+G+ D E++ V + ST
Sbjct: 323 PHLLDIYPRTPHPHEGRIDTVEINPKLDVTDLQTST 358
Score = 148 (57.2 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 49/163 (30%), Positives = 75/163 (46%)
Query: 245 APGRLV--SGDCNSCIHLWEPASDATWNVDPNPFI----GHAASVEDLQWSPTESDVFAS 298
AP R V S D E S WN+ F+ H V ++SP + + S
Sbjct: 103 APVRSVDFSADGQFLASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSP-DGRLIVS 161
Query: 299 CSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 358
CS D I IWDT K + +F N +++N +C+ ++GSD T I D+R+ K
Sbjct: 162 CSEDKTIKIWDT-TNKQCVNNFSDFVGFANFVAFNPNGTCIASAGSDH-TVKIWDIRVNK 219
Query: 359 GGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDL 401
++ H++ H V + + P G+ L +S+D L I DL
Sbjct: 220 ----LLQHYQVHSGGVNCVSFHP-SGNYLITASSDGTLKILDL 257
Score = 145 (56.1 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 51/182 (28%), Positives = 88/182 (48%)
Query: 223 QSPLVK--FGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHA 280
+ P+++ F GHK ++D++P +L +G ++ + LW A ++GH
Sbjct: 6 EDPVLERYFKGHKAAITSVDFSPNGK-QLATGSWDTFLMLWSLRPQAR----AFRYVGHK 60
Query: 281 ASVEDLQWSPTESDVFASCSVDGNIAIW--DTRVGKSALMSFKAHNADVNVISWNRLASC 338
+ +Q+SP ++ AS S D I +W D R GKS+ FKAH A V + ++
Sbjct: 61 DVITSVQFSPL-GNLLASASRDRTIRLWIPDKR-GKSS--EFKAHTAPVRSVDFSADGQ- 115
Query: 339 LLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTI 398
LAS S+D + + ++ + S+ H H V ++SP +G + S D + I
Sbjct: 116 FLASASEDKSIKVWNMYRQRFLYSLYRH----THWVRCAKFSP-DGRLIVSCSEDKTIKI 170
Query: 399 WD 400
WD
Sbjct: 171 WD 172
>UNIPROTKB|Q17BB0 [details] [associations]
symbol:AAEL005041 "Ribosome biogenesis protein WDR12
homolog" species:7159 "Aedes aegypti" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154
KO:K14863 EMBL:CH477324 RefSeq:XP_001650205.1
ProteinModelPortal:Q17BB0 STRING:Q17BB0
EnsemblMetazoa:AAEL005041-RA GeneID:5565845
KEGG:aag:AaeL_AAEL005041 VectorBase:AAEL005041 HOGENOM:HOG000264464
OMA:LQTRFFT OrthoDB:EOG4BNZTB PhylomeDB:Q17BB0 HAMAP:MF_03029
Uniprot:Q17BB0
Length = 427
Score = 126 (49.4 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 28/116 (24%), Positives = 58/116 (50%)
Query: 231 GHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSP 290
GHK + + ++ + G +++ + + L++P S+ + N ++GH V+ ++WS
Sbjct: 301 GHKSF-FDLSYSHLN-GLIIAASPDKNLRLYDPKSNQG-TIVKNTYLGHTQWVQSVRWST 357
Query: 291 TESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDD 346
T +F S + D ++ +WD R K+ + H V W+ +L+ GSD+
Sbjct: 358 TNEYLFVSGAYDNHVKLWDYRSPKAPIFELIGHEDKVLACDWSN-PKFILSGGSDN 412
Score = 70 (29.7 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 158 TPILQLRKVAHQGCVNRIRAMSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGH 215
TP+L L H+ C++ ++ + N + +SW T +++WD L+ + +SE + GH
Sbjct: 253 TPVLTL--AGHRECISGVQWIDDNTLVTSSWDHT--IKIWDLA--LSGI-KSE-ICGH 302
>DICTYBASE|DDB_G0275073 [details] [associations]
symbol:pwp1 "periodic tryptophan protein"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0006364 "rRNA processing"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0275073 GO:GO:0005829 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 GO:GO:0006364 KO:K14791
OMA:ICARNED RefSeq:XP_643788.1 ProteinModelPortal:Q869X0
STRING:Q869X0 EnsemblProtists:DDB0235359 GeneID:8619833
KEGG:ddi:DDB_G0275073 InParanoid:Q869X0 ProtClustDB:CLSZ2455247
Uniprot:Q869X0
Length = 569
Score = 154 (59.3 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 46/171 (26%), Positives = 68/171 (39%)
Query: 279 HAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASC 338
H V L W+ + +V AS S D + +WD + L +F H V+ + WN
Sbjct: 262 HRDGVMSLSWNSHQRNVLASGSSDNTVKVWDITT-QQCLNTFTHHKDKVSCLHWNSHEKT 320
Query: 339 LLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTI 398
L GS D SI D+R DS A+ K V S+ W+PH V + D +L
Sbjct: 321 ALLIGSHDKHVSILDVR---APDS--AYKWSVKGEVESLSWNPHNPKEFIVGTDDGRLLC 375
Query: 399 WDLSLXXXXXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQKDLKELHWHTQ 449
+D +L + V+ P Q+ F G D W+ +
Sbjct: 376 YDATLGTAAAPVWSVQASQKGSVSCFSYCPGQVGFFATGSSDHTVKLWNLE 426
Score = 146 (56.5 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 47/175 (26%), Positives = 71/175 (40%)
Query: 228 KFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQ 287
K G H+D ++ WN L SG ++ + +W D T N F H V L
Sbjct: 258 KEGSHRDGVMSLSWNSHQRNVLASGSSDNTVKVW----DITTQQCLNTFTHHKDKVSCLH 313
Query: 288 WSPTESDVFASCSVDGNIAIWDTRVGKSALM-SFKAHNADVNVISWNRLASCLLASGSDD 346
W+ E S D +++I D R SA S K +V +SWN G+DD
Sbjct: 314 WNSHEKTALLIGSHDKHVSILDVRAPDSAYKWSVKG---EVESLSWNPHNPKEFIVGTDD 370
Query: 347 GTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDL 401
G +D L V + K V+ + P + A S+D+ + +W+L
Sbjct: 371 GRLLCYDATLGTAAAPVWSVQASQKGSVSCFSYCPGQVGFFATGSSDHTVKLWNL 425
>UNIPROTKB|Q13610 [details] [associations]
symbol:PWP1 "Periodic tryptophan protein 1 homolog"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=TAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH471054 GO:GO:0006351 CTD:11137 HOGENOM:HOG000212580
HOVERGEN:HBG001543 KO:K14791 OMA:RGVAKET OrthoDB:EOG4STS4J
EMBL:L07758 EMBL:AK290681 IPI:IPI00014298 PIR:I39360
RefSeq:NP_008993.1 UniGene:Hs.506652 ProteinModelPortal:Q13610
SMR:Q13610 IntAct:Q13610 STRING:Q13610 PhosphoSite:Q13610
DMDM:2494897 PaxDb:Q13610 PeptideAtlas:Q13610 PRIDE:Q13610
DNASU:11137 Ensembl:ENST00000412830 GeneID:11137 KEGG:hsa:11137
UCSC:uc001tmo.1 GeneCards:GC12P108079 HGNC:HGNC:17015 HPA:HPA038707
neXtProt:NX_Q13610 PharmGKB:PA142671112 InParanoid:Q13610
PhylomeDB:Q13610 ChiTaRS:PWP1 GenomeRNAi:11137 NextBio:42336
ArrayExpress:Q13610 Bgee:Q13610 CleanEx:HS_PWP1
Genevestigator:Q13610 GermOnline:ENSG00000136045 Uniprot:Q13610
Length = 501
Score = 153 (58.9 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 40/171 (23%), Positives = 71/171 (41%)
Query: 231 GHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSP 290
GH D + WN + L S ++ + LW D + H V+ LQ+ P
Sbjct: 254 GHTDAVLDLSWNKLIRNVLASASADNTVILW----DMSLGKPAASLAVHTDKVQTLQFHP 309
Query: 291 TESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFS 350
E+ S S D ++A++D R + ++ + + ++WN + C + +DDG
Sbjct: 310 FEAQTLISGSYDKSVALYDCRSPDESHRMWR-FSGQIERVTWNHFSPCHFLASTDDGFVY 368
Query: 351 IHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDL 401
D R D + H ++ ++ S L +SAD + IWD+
Sbjct: 369 NLDAR----SDKPIFTLNAHNDEISGLDLSSQIKGCLVTASADKYVKIWDI 415
Score = 103 (41.3 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 28/88 (31%), Positives = 44/88 (50%)
Query: 313 GKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKH 372
GK + S + H V +SWN+L +LAS S D T + D+ L K S+ H +
Sbjct: 246 GKKS-SSAEGHTDAVLDLSWNKLIRNVLASASADNTVILWDMSLGKPAASLAVHTD---- 300
Query: 373 PVTSIEWSPHEGSTLAVSSADNQLTIWD 400
V ++++ P E TL S D + ++D
Sbjct: 301 KVQTLQFHPFEAQTLISGSYDKSVALYD 328
Score = 59 (25.8 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 18/72 (25%), Positives = 29/72 (40%)
Query: 242 NPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFASCSV 301
N + GR CN +H++ D+ + + SVE L + P+ D +
Sbjct: 150 NLIVCGRAEQDQCNLEVHVYNQEEDSFYVHHDILLSAYPLSVEWLNFDPSPDDSTGNYIA 209
Query: 302 DGN----IAIWD 309
GN I +WD
Sbjct: 210 VGNMTPVIEVWD 221
>MGI|MGI:1914735 [details] [associations]
symbol:Pwp1 "PWP1 homolog (S. cerevisiae)" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1914735 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:11137
GeneTree:ENSGT00390000017324 HOGENOM:HOG000212580
HOVERGEN:HBG001543 KO:K14791 OMA:RGVAKET OrthoDB:EOG4STS4J
EMBL:AK009972 EMBL:AK082158 EMBL:BC003199 EMBL:BC023137
IPI:IPI00320422 RefSeq:NP_598754.2 UniGene:Mm.18834
ProteinModelPortal:Q99LL5 SMR:Q99LL5 IntAct:Q99LL5 STRING:Q99LL5
PhosphoSite:Q99LL5 PaxDb:Q99LL5 PRIDE:Q99LL5
Ensembl:ENSMUST00000001836 GeneID:103136 KEGG:mmu:103136
UCSC:uc007gnc.2 InParanoid:Q99LL5 NextBio:355805 Bgee:Q99LL5
CleanEx:MM_PWP1 Genevestigator:Q99LL5 GermOnline:ENSMUSG00000001785
Uniprot:Q99LL5
Length = 501
Score = 153 (58.9 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 41/171 (23%), Positives = 69/171 (40%)
Query: 231 GHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSP 290
GH D + WN L S +S + LW D + H V+ LQ+ P
Sbjct: 253 GHTDAVLDLSWNKTVRNVLASASADSTVVLW----DLSVGKSVARLTAHTDKVQTLQFHP 308
Query: 291 TESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFS 350
E+ S S D ++A++D R ++ + + ++WN + C + +DDG
Sbjct: 309 FEAQTLISGSYDKSVALYDCRDPSQNHRQWR-FSGQIERVTWNHFSPCHFLASTDDGFVY 367
Query: 351 IHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDL 401
D R D + H ++ ++ S L +SAD + IWD+
Sbjct: 368 NLDAR----SDKPIFTLNAHNDEISGLDLSSQIKGCLVTASADKFVKIWDI 414
>DICTYBASE|DDB_G0287817 [details] [associations]
symbol:wdr24 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA] [GO:0005053 "peroxisome matrix targeting
signal-2 binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0287817 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GenomeReviews:CM000154_GR
EMBL:AAFI02000104 GO:GO:0016558 GO:GO:0005053 PANTHER:PTHR22850:SF4
RefSeq:XP_637077.1 ProteinModelPortal:Q54JS5
EnsemblProtists:DDB0304352 GeneID:8626332 KEGG:ddi:DDB_G0287817
OMA:NEPCKGL Uniprot:Q54JS5
Length = 1023
Score = 157 (60.3 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 36/149 (24%), Positives = 67/149 (44%)
Query: 255 NSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGK 314
N + +W + + +V+ F H+ +V L W P + D + S D + +WD R
Sbjct: 92 NGAVVIWNTVREGSKSVE-RVFTDHSRAVNKLAWHPEKLDCILTGSQDNTLRMWDIRDSA 150
Query: 315 SAL-MSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHP 373
+A ++F + + + +N + A+ D+GT + D+R V H+
Sbjct: 151 NASKITFSPKSESIRDVQFNPSQANQFAAAFDNGTIQLWDIRK---PTIAVEKITSHQGL 207
Query: 374 VTSIEWSPHEGSTLAVSSADNQLTIWDLS 402
V +I+W P E + +A D + +WD S
Sbjct: 208 VLTIDWHPEEKNIIASGGRDRAIRVWDFS 236
Score = 150 (57.9 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 43/175 (24%), Positives = 79/175 (45%)
Query: 229 FGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQW 288
F H + W+P +++G ++ + +W+ A N F + S+ D+Q+
Sbjct: 112 FTDHSRAVNKLAWHPEKLDCILTGSQDNTLRMWDIRDSA--NASKITFSPKSESIRDVQF 169
Query: 289 SPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGT 348
+P++++ FA+ +G I +WD R A+ +H V I W+ ++ASG D
Sbjct: 170 NPSQANQFAAAFDNGTIQLWDIRKPTIAVEKITSHQGLVLTIDWHPEEKNIIASGGRDRA 229
Query: 349 FSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSA--DNQLTIWDL 401
+ D K ++V V+ I+W P +A S+ D Q+ IWD+
Sbjct: 230 IRVWDFSNGKSLNNVSTISS-----VSRIKWRPGNKWHIASCSSIVDFQIHIWDV 279
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 153 (58.9 bits), Expect = 9.7e-08, P = 9.7e-08
Identities = 50/187 (26%), Positives = 86/187 (45%)
Query: 218 PQVLNQSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFI 277
P+ +N GH A+ ++P A + SG + + +W ++ F
Sbjct: 161 PESVNYRQKFLLRGHLRGVSAVRFSPDA-SMIASGGADGAVKVWAASTGKLIYT----FE 215
Query: 278 GHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLAS 337
GH A + + WSP + + AS S D I +W+ GK+ F H+ V I+++ +
Sbjct: 216 GHLAGISTISWSPDGATI-ASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGN 274
Query: 338 CLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIE--WSPHEGSTLAVSSADNQ 395
+L SGS D + D+R + S+ AH + PV+ I+ W +G+ +A + D
Sbjct: 275 -MLVSGSYDEAVFLWDVRSARVMKSLPAHSD----PVSGIDVVW---DGTLIASCATDGL 326
Query: 396 LTIWDLS 402
+ IWD S
Sbjct: 327 VRIWDTS 333
Score = 152 (58.6 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 50/174 (28%), Positives = 78/174 (44%)
Query: 229 FGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQW 288
F GH I W+P + SG + I LW T P PFIGH V + +
Sbjct: 214 FEGHLAGISTISWSPDG-ATIASGSDDKTIRLWNVL---TGKAHPTPFIGHHNYVYAIAF 269
Query: 289 SPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVIS--WNRLASCLLASGSDD 346
SP + ++ S S D + +WD R + + S AH+ V+ I W+ L+AS + D
Sbjct: 270 SP-KGNMLVSGSYDEAVFLWDVRSAR-VMKSLPAHSDPVSGIDVVWD---GTLIASCATD 324
Query: 347 GTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWD 400
G I D G + PV+S+++SP+ G + + D+ + +WD
Sbjct: 325 GLVRIWDTST---GQCLRTLVHEDNPPVSSVKFSPN-GKYVLAWTLDDCVRLWD 374
>UNIPROTKB|F1SKV7 [details] [associations]
symbol:ERCC8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051865 "protein autoubiquitination" evidence=IEA]
[GO:0045739 "positive regulation of DNA repair" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032403 "protein complex binding"
evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin ligase complex"
evidence=IEA] [GO:0016363 "nuclear matrix" evidence=IEA]
[GO:0010165 "response to X-ray" evidence=IEA] [GO:0009411 "response
to UV" evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0000109
"nucleotide-excision repair complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0009411 GO:GO:0006979 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004842 GO:GO:0016363
GO:GO:0000209 GO:GO:0010165 GO:GO:0045739 GO:GO:0051865
GO:GO:0006283 KO:K10570 GO:GO:0031464 GO:GO:0000109
GeneTree:ENSGT00390000009065 OMA:TMLRGHY EMBL:CU570846
EMBL:FP067346 RefSeq:XP_003134037.3 Ensembl:ENSSSCT00000018442
GeneID:100524405 KEGG:ssc:100524405 Uniprot:F1SKV7
Length = 396
Score = 151 (58.2 bits), Expect = 9.7e-08, P = 9.7e-08
Identities = 50/174 (28%), Positives = 85/174 (48%)
Query: 239 IDWNPVAPGRLVSGDCNSCIHLW--EPAS-------DATWNVDPN-PFIGHAASVEDLQW 288
+D PV ++SG + I L+ E AS A +V N P + H SVE +QW
Sbjct: 49 LDIEPVEGRYMLSGGSDGVIVLYDLENASRQPYYTCKAVCSVGRNHPDV-HKYSVETVQW 107
Query: 289 SPTESDVFASCSVDGNIAIWDTRVGKSA-LMSFKAHNADVNVISWNRLASCLLASGSDDG 347
P ++ +F S S D + +WDT ++A + +F+ + +S CL+A G+
Sbjct: 108 YPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFE-ETVYSHHMSPVATKHCLVAVGTKGP 166
Query: 348 TFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDL 401
+ DL+ G S + + H+ + ++ WSP LA +SAD++ +WD+
Sbjct: 167 KVQLCDLK--SGSCSHI--LQGHRQEILAVSWSPRYEYILATASADSKAKLWDV 216
>TAIR|locus:2045648 [details] [associations]
symbol:AT2G30050 "AT2G30050" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005829 "cytosol" evidence=RCA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005643 "nuclear pore"
evidence=IDA] [GO:0006098 "pentose-phosphate shunt" evidence=RCA]
[GO:0009651 "response to salt stress" evidence=RCA] [GO:0006900
"membrane budding" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005643 EMBL:AC004680 EMBL:AC004165 UniGene:At.25577
HOGENOM:HOG000216895 KO:K14004 OMA:IKLWKEE EMBL:AF412112
EMBL:AY124848 IPI:IPI00529872 PIR:T00593 RefSeq:NP_180566.1
UniGene:At.74333 ProteinModelPortal:O64740 SMR:O64740 IntAct:O64740
STRING:O64740 PaxDb:O64740 PRIDE:O64740 ProMEX:O64740
EnsemblPlants:AT2G30050.1 GeneID:817556 KEGG:ath:AT2G30050
TAIR:At2g30050 InParanoid:O64740 PhylomeDB:O64740
ProtClustDB:CLSN2683847 ArrayExpress:O64740 Genevestigator:O64740
Uniprot:O64740
Length = 302
Score = 148 (57.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 53/196 (27%), Positives = 82/196 (41%)
Query: 226 LVKFGGHKDEGYAIDW-NPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVE 284
L GH+ + + W +P L S + + LW+ + W D + F H +SV
Sbjct: 49 LATLTGHRGPVWEVAWAHPKYGSILASCSYDGQVILWKEGNQNQWTQD-HVFTDHKSSVN 107
Query: 285 DLQWSPTESDVFASC-SVDGNIAIWDTRV--GKSALMSFKAHNADVNVISW------NRL 335
+ W+P + + +C S DGNI+++ R G +AH V +SW L
Sbjct: 108 SIAWAPHDIGLSLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPATAPGAL 167
Query: 336 ASC-------LLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHP--VTSIEWSPHEG-- 384
S LASG D T + +L G + KH V + W+P+ G
Sbjct: 168 VSSGLLDPVYKLASGGCDNTVKVW--KLANGSWKMDCFPALQKHTDWVRDVAWAPNLGLP 225
Query: 385 -STLAVSSADNQLTIW 399
ST+A S D ++ IW
Sbjct: 226 KSTIASGSQDGKVIIW 241
Score = 128 (50.1 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 42/142 (29%), Positives = 58/142 (40%)
Query: 278 GHAASVEDLQWS-PTESDVFASCSVDGNIAIWDTRVGKSALMS--FKAHNADVNVISWNR 334
GH V ++ W+ P + ASCS DG + +W F H + VN I+W
Sbjct: 54 GHRGPVWEVAWAHPKYGSILASCSYDGQVILWKEGNQNQWTQDHVFTDHKSSVNSIAWAP 113
Query: 335 LASCL-LASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSA- 392
L LA GS DG S+ R G D+ + H VTS+ W+P VSS
Sbjct: 114 HDIGLSLACGSSDGNISVFTARADGGWDTSRID-QAHPVGVTSVSWAPATAPGALVSSGL 172
Query: 393 ------------DNQLTIWDLS 402
DN + +W L+
Sbjct: 173 LDPVYKLASGGCDNTVKVWKLA 194
>UNIPROTKB|F1SHE8 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070545 "PeBoW complex" evidence=IEA] [GO:0030687
"preribosome, large subunit precursor" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863 OMA:LQTRFFT
GeneTree:ENSGT00640000091456 EMBL:CU469263 RefSeq:XP_003133640.3
Ensembl:ENSSSCT00000017547 GeneID:100512929 KEGG:ssc:100512929
Uniprot:F1SHE8
Length = 423
Score = 151 (58.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 43/123 (34%), Positives = 55/123 (44%)
Query: 278 GHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLAS 337
GH ++ + WS E S S D I +WD G +L S N N IS++ L
Sbjct: 255 GHKEAISSVLWSDAEE--ICSASWDHTIGVWDVESG--SLKSTLTGNKVFNCISYSPLCK 310
Query: 338 CLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLT 397
LASGS D + D R K G V H VTS++WSP L S DN +
Sbjct: 311 -RLASGSTDRHIRLWDPRT-KDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVK 368
Query: 398 IWD 400
+WD
Sbjct: 369 LWD 371
Score = 144 (55.7 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 35/112 (31%), Positives = 53/112 (47%)
Query: 239 IDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFAS 298
I ++P+ RL SG + I LW+P + V + H V ++WSPT S
Sbjct: 303 ISYSPLCK-RLASGSTDRHIRLWDPRTKDGSLVSLS-LTSHTGWVTSVKWSPTHEQQLIS 360
Query: 299 CSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFS 350
S+D + +WDTR K+ L AH V + W LL+ G+D+ +S
Sbjct: 361 GSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWTN-TGLLLSGGADNKLYS 411
Score = 129 (50.5 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 57/237 (24%), Positives = 99/237 (41%)
Query: 168 HQGCVNRIRAMSQNPHICA-SWADTGHVQVWDF--RSHLNALAESETVAG--HGAPQV-L 221
H G V+ I S C+ SW +++W + + ES Q+ L
Sbjct: 188 HAGSVDSIAVDSTGTRFCSGSWDKM--LKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGL 245
Query: 222 NQSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAA 281
++P+V GHK+ ++ W+ + S + I +W+ S + + G+
Sbjct: 246 TRTPIVTLSGHKEAISSVLWSDAE--EICSASWDHTIGVWDVESGSL----KSTLTGNKV 299
Query: 282 SVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFK--AHNADVNVISWNRLASCL 339
+ +SP + AS S D +I +WD R +L+S +H V + W+
Sbjct: 300 -FNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 357
Query: 340 LASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQL 396
L SGS D + D R K + + H+ V S++W+ + G L+ ADN+L
Sbjct: 358 LISGSLDNIVKLWDTRSCK---APLYDLAAHEDKVLSVDWT-NTGLLLS-GGADNKL 409
>UNIPROTKB|Q9GZL7 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9606 "Homo sapiens" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IC] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0070545 "PeBoW complex" evidence=IDA] [GO:0000463 "maturation
of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0030687 "preribosome, large subunit
precursor" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
HAMAP:MF_03029 CTD:55759 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:AF242546 EMBL:AK001743 EMBL:AK022781 EMBL:AK022782
EMBL:AK056092 EMBL:BC008082 IPI:IPI00304232 RefSeq:NP_060726.3
UniGene:Hs.73291 ProteinModelPortal:Q9GZL7 SMR:Q9GZL7 IntAct:Q9GZL7
STRING:Q9GZL7 PhosphoSite:Q9GZL7 DMDM:20140802 SWISS-2DPAGE:Q9GZL7
PaxDb:Q9GZL7 PeptideAtlas:Q9GZL7 PRIDE:Q9GZL7 DNASU:55759
Ensembl:ENST00000261015 GeneID:55759 KEGG:hsa:55759 UCSC:uc002uzl.3
GeneCards:GC02M203709 HGNC:HGNC:14098 HPA:HPA036389
neXtProt:NX_Q9GZL7 PharmGKB:PA37841 InParanoid:Q9GZL7
PhylomeDB:Q9GZL7 GenomeRNAi:55759 NextBio:60775 ArrayExpress:Q9GZL7
Bgee:Q9GZL7 CleanEx:HS_WDR12 Genevestigator:Q9GZL7
GermOnline:ENSG00000138442 Uniprot:Q9GZL7
Length = 423
Score = 151 (58.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 44/123 (35%), Positives = 55/123 (44%)
Query: 278 GHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLAS 337
GH +V + WS E S S D I +WD G +L S N N IS++ L
Sbjct: 255 GHMEAVSSVLWSDAEE--ICSASWDHTIRVWDVESG--SLKSTLTGNKVFNCISYSPLCK 310
Query: 338 CLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLT 397
LASGS D + D R K G V H VTS++WSP L S DN +
Sbjct: 311 -RLASGSTDRHIRLWDPRT-KDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVK 368
Query: 398 IWD 400
+WD
Sbjct: 369 LWD 371
Score = 142 (55.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 35/112 (31%), Positives = 53/112 (47%)
Query: 239 IDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFAS 298
I ++P+ RL SG + I LW+P + V + H V ++WSPT S
Sbjct: 303 ISYSPLCK-RLASGSTDRHIRLWDPRTKDGSLVSLS-LTSHTGWVTSVKWSPTHEQQLIS 360
Query: 299 CSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFS 350
S+D + +WDTR K+ L AH V + W LL+ G+D+ +S
Sbjct: 361 GSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWTD-TGLLLSGGADNKLYS 411
Score = 121 (47.7 bits), Expect = 0.00023, P = 0.00023
Identities = 43/178 (24%), Positives = 76/178 (42%)
Query: 221 LNQSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHA 280
L ++P+V GH + ++ W+ + S + I +W+ S + + G+
Sbjct: 245 LTRTPIVTLSGHMEAVSSVLWSDAE--EICSASWDHTIRVWDVESGSL----KSTLTGNK 298
Query: 281 ASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFK--AHNADVNVISWNRLASC 338
+ +SP + AS S D +I +WD R +L+S +H V + W+
Sbjct: 299 V-FNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQ 356
Query: 339 LLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQL 396
L SGS D + D R K + + H+ V S++W+ + L ADN+L
Sbjct: 357 QLISGSLDNIVKLWDTRSCK---APLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKL 409
>UNIPROTKB|Q5REE6 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9601 "Pongo abelii" [GO:0000463 "maturation of LSU-rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 HSSP:P16649
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863
HOGENOM:HOG000264464 OMA:LQTRFFT HAMAP:MF_03029 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:CR857583 RefSeq:NP_001124867.1 UniGene:Pab.3253
ProteinModelPortal:Q5REE6 Ensembl:ENSPPYT00000015218
GeneID:100171729 KEGG:pon:100171729 InParanoid:Q5REE6
Uniprot:Q5REE6
Length = 423
Score = 151 (58.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 44/123 (35%), Positives = 55/123 (44%)
Query: 278 GHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLAS 337
GH +V + WS E S S D I +WD G +L S N N IS++ L
Sbjct: 255 GHMEAVSSVLWSDAEE--ICSASWDHTIRVWDVESG--SLKSTLTGNKVFNCISYSPLCK 310
Query: 338 CLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLT 397
LASGS D + D R K G V H VTS++WSP L S DN +
Sbjct: 311 -RLASGSTDRHIRLWDPRT-KDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVK 368
Query: 398 IWD 400
+WD
Sbjct: 369 LWD 371
Score = 142 (55.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 35/112 (31%), Positives = 53/112 (47%)
Query: 239 IDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFAS 298
I ++P+ RL SG + I LW+P + V + H V ++WSPT S
Sbjct: 303 ISYSPLCK-RLASGSTDRHIRLWDPRTKDGSLVSLS-LTSHTGWVTSVKWSPTHEQQLIS 360
Query: 299 CSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFS 350
S+D + +WDTR K+ L AH V + W LL+ G+D+ +S
Sbjct: 361 GSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWTD-TGLLLSGGADNKLYS 411
Score = 120 (47.3 bits), Expect = 0.00030, P = 0.00030
Identities = 43/178 (24%), Positives = 76/178 (42%)
Query: 221 LNQSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHA 280
L ++P+V GH + ++ W+ + S + I +W+ S + + G+
Sbjct: 245 LTRTPVVTLSGHMEAVSSVLWSDAE--EICSASWDHTIRVWDVESGSL----KSTLTGNK 298
Query: 281 ASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFK--AHNADVNVISWNRLASC 338
+ +SP + AS S D +I +WD R +L+S +H V + W+
Sbjct: 299 V-FNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQ 356
Query: 339 LLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQL 396
L SGS D + D R K + + H+ V S++W+ + L ADN+L
Sbjct: 357 QLISGSLDNIVKLWDTRSCK---APLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKL 409
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 149 (57.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 51/184 (27%), Positives = 81/184 (44%)
Query: 218 PQVLNQSPLVKFGGHKDEGYAIDWNPVAPGR-LVSGDCNSCIHLWEPASDATWNVDPNPF 276
PQ N GH ++ ++P G+ L S + I +W A D +
Sbjct: 31 PQTPNYILKYTLKGHLKSISSVKFSP--DGKWLASASADKTIKIWG-AYDGKFE---RTL 84
Query: 277 IGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLA 336
GH + D+ WS +S + S S D I IWD GK + + K H V +S+N +
Sbjct: 85 EGHKEGISDIAWSQ-DSKLICSASDDKTIKIWDVESGKM-VKTLKGHKEYVFGVSFNPQS 142
Query: 337 SCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQL 396
+ L+ SGS D I D+ + + AH + PVT + ++ +G+ + S D +
Sbjct: 143 N-LIVSGSFDENVRIWDVNTGECTKMISAHSD----PVTGVHFN-RDGTLVVSGSYDGTV 196
Query: 397 TIWD 400
IWD
Sbjct: 197 RIWD 200
Score = 138 (53.6 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 41/126 (32%), Positives = 64/126 (50%)
Query: 278 GHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLAS 337
GH S+ +++SP + AS S D I IW GK + + H ++ I+W++ S
Sbjct: 44 GHLKSISSVKFSP-DGKWLASASADKTIKIWGAYDGKFE-RTLEGHKEGISDIAWSQ-DS 100
Query: 338 CLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVS-SADNQL 396
L+ S SDD T I D+ + G +V + HK V + ++P S L VS S D +
Sbjct: 101 KLICSASDDKTIKIWDV---ESG-KMVKTLKGHKEYVFGVSFNPQ--SNLIVSGSFDENV 154
Query: 397 TIWDLS 402
IWD++
Sbjct: 155 RIWDVN 160
Score = 133 (51.9 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 50/171 (29%), Positives = 82/171 (47%)
Query: 231 GHKDEGYA-IDWNPVAPGRLV-SGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQW 288
GHK EG + I W+ +L+ S + I +W+ S GH V + +
Sbjct: 86 GHK-EGISDIAWSQ--DSKLICSASDDKTIKIWDVESGKMVKT----LKGHKEYVFGVSF 138
Query: 289 SPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGT 348
+P +S++ S S D N+ IWD G+ M AH+ V + +NR + L+ SGS DGT
Sbjct: 139 NP-QSNLIVSGSFDENVRIWDVNTGECTKM-ISAHSDPVTGVHFNRDGT-LVVSGSYDGT 195
Query: 349 FSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
I D + +++ E K V+ +++SP+ G + + DN L +W
Sbjct: 196 VRIWDTTTGQLLNTIST--EDGKE-VSFVKFSPN-GKFVLAGTLDNTLRLW 242
>UNIPROTKB|B4MY77 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7260 "Drosophila willistoni"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 OMA:SWKCVCT OrthoDB:EOG45DV4X EMBL:CH963894
RefSeq:XP_002066080.1 ProteinModelPortal:B4MY77 STRING:B4MY77
EnsemblMetazoa:FBtr0252775 GeneID:6643305 KEGG:dwi:Dwil_GK22124
FlyBase:FBgn0224109 InParanoid:B4MY77 Uniprot:B4MY77
Length = 335
Score = 149 (57.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 45/172 (26%), Positives = 75/172 (43%)
Query: 231 GHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSP 290
GHK + + W+P G+ + I +W S +W+ GH ++ +++WSP
Sbjct: 12 GHKGRIWGVAWHPKGNTFASCGE-DKAIRIWS-LSGNSWSTKTILSDGHKRTIREIRWSP 69
Query: 291 TESDVFASCSVDGNIAIWDTRVGK-SALMSFKAHNADVNVISWNRLASCLLASGSDDGTF 349
AS S D AIW G+ + + H +V +SW++ LLA+ S D +
Sbjct: 70 C-GQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSKSGG-LLATCSRDKSV 127
Query: 350 SIHDLRLLKGGDSV--VAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
I ++ G D A H V + W P + LA +S DN + ++
Sbjct: 128 WIWEVA---GDDEFECAAVLNPHTQDVKRVVWHPTK-EILASASYDNTIKMF 175
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 155 (59.6 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 44/153 (28%), Positives = 74/153 (48%)
Query: 249 LVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNIAIW 308
+ +G + I LW+ +A GH ++ + + P + FAS S+D N+ IW
Sbjct: 74 VAAGAASGTIKLWD-LEEAKI---VRTLTGHRSNCISVDFHPF-GEFFASGSLDTNLKIW 128
Query: 309 DTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFE 368
D R K + ++K H VNV+ + ++ SG +D + DL K ++ F+
Sbjct: 129 DIRK-KGCIHTYKGHTRGVNVLRFTPDGRWVV-SGGEDNIVKVWDLTAGK----LLTEFK 182
Query: 369 YHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDL 401
H+ + S+++ PHE LA SAD + WDL
Sbjct: 183 SHEGQIQSLDFHPHE-FLLATGSADRTVKFWDL 214
Score = 128 (50.1 bits), Expect = 0.00010, P = 0.00010
Identities = 34/127 (26%), Positives = 64/127 (50%)
Query: 276 FIGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGK-SALMSFKAHNADVNVISWNR 334
F+ H+A+V L+ S V + D + +W +GK +A++S H++ ++ ++++
Sbjct: 12 FVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLW--AIGKPNAILSLYGHSSGIDSVTFDA 69
Query: 335 LASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADN 394
+ L+A+G+ GT + DL K +V H+ S+++ P G A S D
Sbjct: 70 -SEVLVAAGAASGTIKLWDLEEAK----IVRTLTGHRSNCISVDFHPF-GEFFASGSLDT 123
Query: 395 QLTIWDL 401
L IWD+
Sbjct: 124 NLKIWDI 130
>CGD|CAL0000650 [details] [associations]
symbol:orf19.2307 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:2000045 "regulation of G1/S
transition of mitotic cell cycle" evidence=IEA] [GO:0000070
"mitotic sister chromatid segregation" evidence=IEA] [GO:0006379
"mRNA cleavage" evidence=IEA] [GO:0006378 "mRNA polyadenylation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000650 GO:GO:0005634 GO:GO:0007059
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397 EMBL:AACQ01000114
EMBL:AACQ01000113 RefSeq:XP_713912.1 RefSeq:XP_713970.1
ProteinModelPortal:Q59WJ4 STRING:Q59WJ4 GeneID:3644356
GeneID:3644415 KEGG:cal:CaO19.2307 KEGG:cal:CaO19.9843 KO:K15542
Uniprot:Q59WJ4
Length = 543
Score = 148 (57.2 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 47/154 (30%), Positives = 68/154 (44%)
Query: 249 LVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNIAIW 308
L+SGD N + W+P + NV N HA V D+ +SP +S F +C D I IW
Sbjct: 192 LLSGDQNGTVKYWQPNFN---NV--NNISAHANGVRDIAFSPNDSK-FLTCGDDSAIKIW 245
Query: 309 DTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFE 368
+ GK + H+ +V W+ L+ SGS D + D R + V+
Sbjct: 246 NFNNGKEE-RTLSGHHWEVKSADWHPNLG-LIVSGSKDNLVKLWDPR----SANCVSTLH 299
Query: 369 YHKHPVTSIEWSPHEGSTLAVS-SADNQLTIWDL 401
KH V + P+ + L S S D I+DL
Sbjct: 300 GFKHTVNKTRFQPNGTARLLASVSRDRSCRIFDL 333
Score = 48 (22.0 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 431 LLFIHQGQKDLKELHWHTQVPGMIVSTAADGF--NILMPSNI 470
+L I + DL + WH M+ + A +G N L+ S I
Sbjct: 339 MLVIRDSETDLSCVAWHPIHASMVTTAAYNGSISNFLLDSYI 380
>UNIPROTKB|Q59WJ4 [details] [associations]
symbol:PFS2 "Polyadenylation factor subunit 2"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0000650 GO:GO:0005634
GO:GO:0007059 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397
EMBL:AACQ01000114 EMBL:AACQ01000113 RefSeq:XP_713912.1
RefSeq:XP_713970.1 ProteinModelPortal:Q59WJ4 STRING:Q59WJ4
GeneID:3644356 GeneID:3644415 KEGG:cal:CaO19.2307
KEGG:cal:CaO19.9843 KO:K15542 Uniprot:Q59WJ4
Length = 543
Score = 148 (57.2 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 47/154 (30%), Positives = 68/154 (44%)
Query: 249 LVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNIAIW 308
L+SGD N + W+P + NV N HA V D+ +SP +S F +C D I IW
Sbjct: 192 LLSGDQNGTVKYWQPNFN---NV--NNISAHANGVRDIAFSPNDSK-FLTCGDDSAIKIW 245
Query: 309 DTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFE 368
+ GK + H+ +V W+ L+ SGS D + D R + V+
Sbjct: 246 NFNNGKEE-RTLSGHHWEVKSADWHPNLG-LIVSGSKDNLVKLWDPR----SANCVSTLH 299
Query: 369 YHKHPVTSIEWSPHEGSTLAVS-SADNQLTIWDL 401
KH V + P+ + L S S D I+DL
Sbjct: 300 GFKHTVNKTRFQPNGTARLLASVSRDRSCRIFDL 333
Score = 48 (22.0 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 431 LLFIHQGQKDLKELHWHTQVPGMIVSTAADGF--NILMPSNI 470
+L I + DL + WH M+ + A +G N L+ S I
Sbjct: 339 MLVIRDSETDLSCVAWHPIHASMVTTAAYNGSISNFLLDSYI 380
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 148 (57.2 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 49/178 (27%), Positives = 83/178 (46%)
Query: 225 PLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVE 284
P+ +F GH++ + ++ A +VS + + LW+ + + IGH
Sbjct: 63 PVQEFTGHENGISDVAFSSDARF-IVSASDDKTLKLWDVETGSLIKT----LIGHTNYAF 117
Query: 285 DLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGS 344
+ ++P +S++ S S D + IWD GK L AH+ V + +NR S L+ S S
Sbjct: 118 CVNFNP-QSNMIVSGSFDETVRIWDVTTGK-CLKVLPAHSDPVTAVDFNRDGS-LIVSSS 174
Query: 345 DDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLS 402
DG I D G V + PV+ + +SP+ G + V + DN L +W++S
Sbjct: 175 YDGLCRIWDSGT---GHCVKTLIDDENPPVSFVRFSPN-GKFILVGTLDNTLRLWNIS 228
>RGD|1311570 [details] [associations]
symbol:Ercc8 "excision repair cross-complementing rodent repair
deficiency, complementation group 8" species:10116 "Rattus
norvegicus" [GO:0000109 "nucleotide-excision repair complex"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0006283
"transcription-coupled nucleotide-excision repair" evidence=IEA]
[GO:0006979 "response to oxidative stress" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0009411 "response
to UV" evidence=IEA] [GO:0010165 "response to X-ray" evidence=IEA]
[GO:0016363 "nuclear matrix" evidence=IEA] [GO:0031464 "Cul4A-RING
ubiquitin ligase complex" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045739 "positive regulation of DNA repair" evidence=IEA]
[GO:0051865 "protein autoubiquitination" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311570 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 KO:K10570
EMBL:CH473955 CTD:1161 GeneTree:ENSGT00390000009065 OMA:TMLRGHY
RefSeq:NP_001101120.2 UniGene:Rn.107979 ProteinModelPortal:G3V7B8
Ensembl:ENSRNOT00000013598 GeneID:310071 KEGG:rno:310071
Uniprot:G3V7B8
Length = 397
Score = 150 (57.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 36/124 (29%), Positives = 65/124 (52%)
Query: 279 HAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSA-LMSFKAHNADVNVISWNRLAS 337
H SVE +QW P ++ +F S S D + +WDT ++A + +F+ + +S
Sbjct: 98 HKYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQAADVFNFE-ETVYSHHMSPAATKH 156
Query: 338 CLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLT 397
CL+A G+ + DL+ G S + + H+ + ++ WSP LA +SAD+++
Sbjct: 157 CLVAVGTRGPKVQLCDLK--SGSCSHI--LQGHRQEILAVSWSPRYDYILATASADSRVK 212
Query: 398 IWDL 401
+WD+
Sbjct: 213 LWDV 216
>DICTYBASE|DDB_G0275925 [details] [associations]
symbol:wdr68 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0275925 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GenomeReviews:CM000151_GR
EMBL:AAFI02000013 RefSeq:XP_643620.2 ProteinModelPortal:Q552R1
EnsemblProtists:DDB0267164 GeneID:8620207 KEGG:ddi:DDB_G0275925
eggNOG:NOG314410 OMA:NKVQIVS ProtClustDB:CLSZ2735624 Uniprot:Q552R1
Length = 325
Score = 148 (57.2 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 44/168 (26%), Positives = 74/168 (44%)
Query: 238 AIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFA 297
+ DWN P L + ++ +W + I H V D+ ++ +D+FA
Sbjct: 122 SFDWNETDPSLLATSSIDTTCTIWNIETGQA----KTQLIAHDKEVFDIAFA-RGTDLFA 176
Query: 298 SCSVDGNIAIWDTRVGKSALMSFKAHN-ADVNVISWNRLASCLLASGSDDGT-FSIHDLR 355
S DG++ ++D R + + + ++ + + + WN+ LA+ D I D+R
Sbjct: 177 SVGADGSLRMFDLRNLEHSTIIYETPSFVPLLRLCWNKQDPNYLATIQQDSPKVIILDIR 236
Query: 356 LLKGGDSV-VAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLS 402
+ SV A +HK V I W+PH + S D Q IWDLS
Sbjct: 237 V----PSVPAAELVFHKSAVNGISWAPHSSCHICTVSDDKQALIWDLS 280
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 153 (58.9 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 47/153 (30%), Positives = 73/153 (47%)
Query: 249 LVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNIAIW 308
+V+G + I +W+ + +GH A++ L + P S V AS S+D +I +W
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRT----LLGHKANICSLDFHPYGSFV-ASGSLDTDIKLW 132
Query: 309 DTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFE 368
D R K + +K+H V + ++ L AS +DD T + DL K V+ F
Sbjct: 133 DVR-RKGCIFKYKSHTQAVRCLRFSPDGKWL-ASAADDHTVKLWDLTAGK----VMFEFT 186
Query: 369 YHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDL 401
H PV +E+ P E LA S+D + WDL
Sbjct: 187 GHSGPVNVVEFHPSE-YLLASGSSDRTIRFWDL 218
Score = 141 (54.7 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 42/138 (30%), Positives = 69/138 (50%)
Query: 269 WNVD-PN---PFIGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHN 324
W+V+ PN GH +E LQ S E + A S G+I +WD K L + H
Sbjct: 48 WSVNKPNCVMSLTGHTTPIESLQISAKEELIVAG-SQSGSIRVWDLEAAK-ILRTLLGHK 105
Query: 325 ADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEG 384
A++ + ++ S +ASGS D + D+R KG + ++ H V + +SP +G
Sbjct: 106 ANICSLDFHPYGS-FVASGSLDTDIKLWDVRR-KG---CIFKYKSHTQAVRCLRFSP-DG 159
Query: 385 STLAVSSADNQLTIWDLS 402
LA ++ D+ + +WDL+
Sbjct: 160 KWLASAADDHTVKLWDLT 177
Score = 138 (53.6 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 65/230 (28%), Positives = 102/230 (44%)
Query: 164 RKVAHQGCVNRIRAMSQNPHICASWADTGHVQVWDFRSHLNALAESET-VAGH--GAPQV 220
R +A G R+ S N C + TGH + L A+ E VAG G+ +V
Sbjct: 34 RLLATGGDDCRVNVWSVNKPNCVM-SLTGHTTPIE---SLQISAKEELIVAGSQSGSIRV 89
Query: 221 --LNQSPLVK-FGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFI 277
L + +++ GHK ++D++P + SG ++ I LW+ +
Sbjct: 90 WDLEAAKILRTLLGHKANICSLDFHPYG-SFVASGSLDTDIKLWDVRRKGCIF----KYK 144
Query: 278 GHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLAS 337
H +V L++SP + AS + D + +WD GK + F H+ VNV+ ++ +
Sbjct: 145 SHTQAVRCLRFSP-DGKWLASAADDHTVKLWDLTAGK-VMFEFTGHSGPVNVVEFHP-SE 201
Query: 338 CLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTL 387
LLASGS D T DL VV+ E PV I ++P +G L
Sbjct: 202 YLLASGSSDRTIRFWDLEKFH----VVSCIEEEATPVRCILFNP-DGCCL 246
>RGD|1598329 [details] [associations]
symbol:Sec31b "SEC31 homolog B (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0044432 "endoplasmic reticulum part"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1598329 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 KO:K14005
GeneTree:ENSGT00390000003175 CTD:25956 OrthoDB:EOG470TGM
EMBL:AC103018 IPI:IPI00554203 RefSeq:NP_001129185.1
UniGene:Rn.45161 ProteinModelPortal:D4ADQ9
Ensembl:ENSRNOT00000035758 GeneID:309433 KEGG:rno:309433
UCSC:RGD:1598329 NextBio:660758 Uniprot:D4ADQ9
Length = 1179
Score = 156 (60.0 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 42/168 (25%), Positives = 75/168 (44%)
Query: 238 AIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAAS-VEDLQWSPTESDVF 296
A+D+NP L SG +S I +W+ + T + P + ++ L W+ +
Sbjct: 126 ALDFNPFQGNLLASGASDSEIFIWD-LNHLTVPMTPGSKSQNPPEDIKALSWNRQVQHIL 184
Query: 297 ASCSVDGNIAIWDTRVGKSALMSFKAHNADVNV--ISWNRLASCLLASGSDDGTFSIHDL 354
+S G +WD R + ++ H++ +N ++WN + L S+D + L
Sbjct: 185 SSAHPSGKAVVWDLRKNEP-IIKVSDHSSRMNCSGLAWNPDIATQLVLCSEDDRLPVIQL 243
Query: 355 RLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLS 402
L+ S + E H + S+ WS + L S+ DNQ+ W+LS
Sbjct: 244 WDLRFASSPLKVLESHSRGILSVSWSQADAELLLSSAKDNQIFCWNLS 291
Score = 124 (48.7 bits), Expect = 0.00043, P = 0.00043
Identities = 34/129 (26%), Positives = 58/129 (44%)
Query: 279 HAASVEDLQWSPTESDVFASCSVDGNIAIWD-TRVGKSALMSFKAHNA--DVNVISWNRL 335
H +V L ++P + ++ AS + D I IWD + K+ N D+ +SWNR
Sbjct: 120 HTGAVRALDFNPFQGNLLASGASDSEIFIWDLNHLTVPMTPGSKSQNPPEDIKALSWNRQ 179
Query: 336 ASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQ 395
+L+S G + DLR K + + + + W+P + L + S D++
Sbjct: 180 VQHILSSAHPSGKAVVWDLR--KNEPIIKVSDHSSRMNCSGLAWNPDIATQLVLCSEDDR 237
Query: 396 LTI---WDL 401
L + WDL
Sbjct: 238 LPVIQLWDL 246
>MGI|MGI:1927241 [details] [associations]
symbol:Wdr12 "WD repeat domain 12" species:10090 "Mus
musculus" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IPI]
[GO:0008283 "cell proliferation" evidence=ISO] [GO:0030687
"preribosome, large subunit precursor" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0070545 "PeBoW complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1927241 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:AY059431 EMBL:AY059432
EMBL:AF239765 EMBL:AB041608 EMBL:AK007500 EMBL:AK012022
EMBL:AK016611 EMBL:AK031436 EMBL:BC004748 EMBL:BC052386
IPI:IPI00121562 RefSeq:NP_001185989.1 RefSeq:NP_001185990.1
RefSeq:NP_067287.1 UniGene:Mm.281079 ProteinModelPortal:Q9JJA4
SMR:Q9JJA4 STRING:Q9JJA4 PhosphoSite:Q9JJA4 PaxDb:Q9JJA4
PRIDE:Q9JJA4 Ensembl:ENSMUST00000027173 Ensembl:ENSMUST00000117438
Ensembl:ENSMUST00000122038 GeneID:57750 KEGG:mmu:57750
InParanoid:Q9JJA4 NextBio:313896 Bgee:Q9JJA4 CleanEx:MM_WDR12
Genevestigator:Q9JJA4 GermOnline:ENSMUSG00000026019 Uniprot:Q9JJA4
Length = 423
Score = 150 (57.9 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 43/123 (34%), Positives = 54/123 (43%)
Query: 278 GHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLAS 337
GH ++ + WS E S S D I +WD G L S N N IS++ L
Sbjct: 255 GHTEAISSVLWSDAEE--ICSASWDHTIRVWDVESG--GLKSTLTGNKVFNCISYSPLCK 310
Query: 338 CLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLT 397
LASGS D + D R K G V H VTS++WSP L S DN +
Sbjct: 311 -RLASGSTDRHIRLWDPRT-KDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVK 368
Query: 398 IWD 400
+WD
Sbjct: 369 LWD 371
Score = 142 (55.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 35/112 (31%), Positives = 53/112 (47%)
Query: 239 IDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFAS 298
I ++P+ RL SG + I LW+P + V + H V ++WSPT S
Sbjct: 303 ISYSPLCK-RLASGSTDRHIRLWDPRTKDGSLVSLS-LTSHTGWVTSVKWSPTHEQQLIS 360
Query: 299 CSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFS 350
S+D + +WDTR K+ L AH V + W LL+ G+D+ +S
Sbjct: 361 GSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWTD-TGLLLSGGADNKLYS 411
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 150 (57.9 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 64/260 (24%), Positives = 108/260 (41%)
Query: 159 PILQLRKVAHQGCVNRIRAMSQNPHIC-ASWADTGHVQVWDFRSHLNA---LAESETVAG 214
P+L+ H+ + + + ASW DT + +W+F+ H A + + V
Sbjct: 8 PVLERYFKGHKAAITSLDLSPNGKQLATASW-DT-FLMLWNFKPHARAYRYVGHKDVVTS 65
Query: 215 -----HGAPQV-LNQSPLVKFGGHKDEGYAIDWNP-VAPGRLV--SGDCNSCIHLWEPAS 265
HG ++ V+ G ++ AP R V S D E S
Sbjct: 66 VQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKS 125
Query: 266 DATWNVDPNPFI----GHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFK 321
W++ F+ H V ++SP + + SCS D I IWDT K + +F
Sbjct: 126 IKVWSMYRQRFLYSLYRHTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDT-TNKQCVNNFS 183
Query: 322 AHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSP 381
N + +N +C+ ++GSD T + D+R+ K ++ H++ H V I + P
Sbjct: 184 DSVGFANFVDFNPSGTCIASAGSDQ-TVKVWDVRVNK----LLQHYQVHSGGVNCISFHP 238
Query: 382 HEGSTLAVSSADNQLTIWDL 401
+ + L +S+D L I DL
Sbjct: 239 SD-NYLVTASSDGTLKILDL 257
Score = 138 (53.6 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 46/154 (29%), Positives = 77/154 (50%)
Query: 247 GRL-VSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNI 305
GRL VS + I +W+ + N + + +G A V+ ++P+ + + AS D +
Sbjct: 156 GRLIVSCSEDKTIKIWDTTNKQCVN-NFSDSVGFANFVD---FNPSGTCI-ASAGSDQTV 210
Query: 306 AIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVA 365
+WD RV K L ++ H+ VN IS++ + L + S DGT I DL L+G ++
Sbjct: 211 KVWDVRVNK-LLQHYQVHSGGVNCISFHP-SDNYLVTASSDGTLKILDL--LEG--RLIY 264
Query: 366 HFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
+ H PV ++ +S G A AD Q+ +W
Sbjct: 265 TLQGHTGPVFTVSFSKG-GELFASGGADTQVLLW 297
>UNIPROTKB|E1BVN4 [details] [associations]
symbol:GNB5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
PRINTS:PR00319 GeneTree:ENSGT00550000074331 InterPro:IPR016346
PIRSF:PIRSF002394 KO:K04539 OMA:ATDGLHE CTD:10681 EMBL:AADN02045388
EMBL:AADN02045389 IPI:IPI00572484 RefSeq:XP_413801.2
ProteinModelPortal:E1BVN4 Ensembl:ENSGALT00000007455 GeneID:415417
KEGG:gga:415417 NextBio:20819029 Uniprot:E1BVN4
Length = 395
Score = 149 (57.5 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 46/157 (29%), Positives = 74/157 (47%)
Query: 255 NSCIHLWEPASDAT---WNVDPNP----FIGHAASVEDLQWSPTES-DVFASCSVDGNIA 306
NS + + + D T W+V+ F GH A V L +P+E+ + F S D
Sbjct: 205 NSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAM 264
Query: 307 IWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAH 366
+WD R G+ + SF+ H++D+N + + ASGSDD T ++DLR D VA
Sbjct: 265 VWDMRSGQ-CIQSFETHDSDINSVRYYPSGDAF-ASGSDDATCRLYDLR----ADREVAI 318
Query: 367 FEYHK--HPVTSIEWSPHEGSTLAVSSADNQLTIWDL 401
+ +S+++S G L D + +WD+
Sbjct: 319 YSKESIIFGASSVDFSL-SGRLLFAGYNDYTINVWDV 354
>UNIPROTKB|E2RFS7 [details] [associations]
symbol:ERCC8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0045739 "positive regulation of DNA repair"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032403 "protein complex
binding" evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin ligase
complex" evidence=IEA] [GO:0016363 "nuclear matrix" evidence=IEA]
[GO:0010165 "response to X-ray" evidence=IEA] [GO:0009411 "response
to UV" evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0000109
"nucleotide-excision repair complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0009411 GO:GO:0006979 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004842 GO:GO:0016363
GO:GO:0000209 GO:GO:0010165 GO:GO:0045739 GO:GO:0051865
GO:GO:0006283 KO:K10570 GO:GO:0031464 GO:GO:0000109 CTD:1161
GeneTree:ENSGT00390000009065 OMA:TMLRGHY EMBL:AAEX03001458
RefSeq:XP_544353.1 ProteinModelPortal:E2RFS7
Ensembl:ENSCAFT00000011467 GeneID:487225 KEGG:cfa:487225
NextBio:20860845 Uniprot:E2RFS7
Length = 396
Score = 149 (57.5 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 48/174 (27%), Positives = 85/174 (48%)
Query: 239 IDWNPVAPGRLVSGDCNSCIHLWE-------P--ASDATWNVDPN-PFIGHAASVEDLQW 288
+D PV ++SG + I L++ P A +V N P + H SVE +QW
Sbjct: 49 LDIEPVEARYMLSGGSDGVIVLYDLENSSRQPYYTCKAVCSVGRNHPDV-HKYSVETVQW 107
Query: 289 SPTESDVFASCSVDGNIAIWDTRVGKSA-LMSFKAHNADVNVISWNRLASCLLASGSDDG 347
P ++ +F S S D + +WDT ++A + +F+ + +S CL+A G+
Sbjct: 108 YPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFE-ETVYSHHMSPVATKHCLVAVGTRGP 166
Query: 348 TFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDL 401
+ DL+ G S + + H+ + ++ WSP LA +SAD+++ +WD+
Sbjct: 167 KVQLCDLK--SGSCSHI--LQGHRQEILAVSWSPRCEYVLATASADSRVKLWDV 216
>FB|FBgn0027518 [details] [associations]
symbol:CG7609 species:7227 "Drosophila melanogaster"
[GO:0007031 "peroxisome organization" evidence=ISS] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=ISS]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0005777 "peroxisome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 GO:GO:0005777 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016558 GO:GO:0005053
PANTHER:PTHR22850:SF4 GeneTree:ENSGT00650000093352 OMA:HALYDSR
UniGene:Dm.3193 FlyBase:FBgn0027518 NextBio:834288 EMBL:AF132181
RefSeq:NP_651720.3 SMR:Q9XZ25 EnsemblMetazoa:FBtr0085543
GeneID:43505 KEGG:dme:Dmel_CG7609 UCSC:CG7609-RB InParanoid:Q9XZ25
GenomeRNAi:43505 Uniprot:Q9XZ25
Length = 776
Score = 153 (58.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 41/181 (22%), Positives = 83/181 (45%)
Query: 223 QSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAAS 282
Q L+ + H+ + + ++ P L+SG + I ++ SD + N + ++ S
Sbjct: 101 QKQLLVYNEHERTAHTVTFHSSEPNILISGSQDGTIKCFDIRSDKSINT----YFCNSES 156
Query: 283 VEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLAS 342
V D+++SP ++F++ S +G + +WD R ++ F AH V W+ + L A+
Sbjct: 157 VRDVKFSPHTQNIFSAVSENGTVQLWDMRKWDKCMVQFTAHYGPVYTCDWHPTRNWL-AT 215
Query: 343 GSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSS--ADNQLTIWD 400
GS D + ++ G + H + V ++W P +A + D + +WD
Sbjct: 216 GSRDKQIKVWNM----DGRPGLEHTIHTIAVVGRVKWRPERTYHIASCALVVDYSVHVWD 271
Query: 401 L 401
+
Sbjct: 272 I 272
Score = 148 (57.2 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 31/122 (25%), Positives = 65/122 (53%)
Query: 282 SVEDLQWSPTESDVFASCSVDGNIAIWD-TRVGKSA-LMSFKAHNADVNVISWNRLASCL 339
S D+ WS +S++ A+ + +G +++WD ++ G+ L+ + H + ++++ +
Sbjct: 67 SANDVAWSTLDSNLLATAATNGVVSVWDLSKFGRQKQLLVYNEHERTAHTVTFHSSEPNI 126
Query: 340 LASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
L SGS DGT D+R K S+ +F + V +++SPH + + S + + +W
Sbjct: 127 LISGSQDGTIKCFDIRSDK---SINTYF-CNSESVRDVKFSPHTQNIFSAVSENGTVQLW 182
Query: 400 DL 401
D+
Sbjct: 183 DM 184
Score = 119 (46.9 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 39/133 (29%), Positives = 55/133 (41%)
Query: 226 LVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHA----A 281
+V+F H Y DW+P L +G + I +W N+D P + H A
Sbjct: 191 MVQFTAHYGPVYTCDWHPTR-NWLATGSRDKQIKVW--------NMDGRPGLEHTIHTIA 241
Query: 282 SVEDLQWSPTESDVFASCS--VDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCL 339
V ++W P + ASC+ VD ++ +WD R SF H I+W S
Sbjct: 242 VVGRVKWRPERTYHIASCALVVDYSVHVWDIRRPYIPFASFNEHTNVTTGIAWQGSDSHC 301
Query: 340 LASGSDDGTFSIH 352
L S S D T H
Sbjct: 302 LLSISKDSTIYKH 314
Score = 47 (21.6 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 175 IRAMSQNPH---ICASWADTGHVQVWDFR 200
+R + +PH I ++ ++ G VQ+WD R
Sbjct: 157 VRDVKFSPHTQNIFSAVSENGTVQLWDMR 185
Score = 45 (20.9 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 13/48 (27%), Positives = 23/48 (47%)
Query: 168 HQGCVNRIRAMSQNPHICASWADTGHVQVWDFRSH--LNA-LAESETV 212
H+ + + S P+I S + G ++ +D RS +N SE+V
Sbjct: 110 HERTAHTVTFHSSEPNILISGSQDGTIKCFDIRSDKSINTYFCNSESV 157
>UNIPROTKB|F1P2Y8 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] [GO:0070545 "PeBoW complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 OMA:LQTRFFT
GeneTree:ENSGT00640000091456 EMBL:AADN02019869 IPI:IPI00587836
Ensembl:ENSGALT00000013803 Uniprot:F1P2Y8
Length = 411
Score = 149 (57.5 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 42/123 (34%), Positives = 55/123 (44%)
Query: 278 GHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLAS 337
GH ++ + WS E S S D I +WD G L S N N +S++ L
Sbjct: 243 GHTEAISSVLWSDAEE--ICSASWDHTIKLWDAETG--GLKSTLTGNKVFNSVSYSPLCR 298
Query: 338 CLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLT 397
LASGS D + D R K G V+ H VTS++WSP L S DN +
Sbjct: 299 -RLASGSTDRHIRLWDPRS-KDGSLVLLSLTSHTGWVTSVKWSPTHEHQLISGSLDNIVK 356
Query: 398 IWD 400
+WD
Sbjct: 357 LWD 359
Score = 143 (55.4 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 34/109 (31%), Positives = 53/109 (48%)
Query: 238 AIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFA 297
++ ++P+ RL SG + I LW+P S ++ H V ++WSPT
Sbjct: 290 SVSYSPLCR-RLASGSTDRHIRLWDPRSK-DGSLVLLSLTSHTGWVTSVKWSPTHEHQLI 347
Query: 298 SCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDD 346
S S+D + +WDTR K+ L AH V + W A LL+ G+D+
Sbjct: 348 SGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLCVDWTE-AGLLLSGGADN 395
>DICTYBASE|DDB_G0295793 [details] [associations]
symbol:DDB_G0295793 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0295793 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000207 KO:K15542 RefSeq:XP_002649088.2
ProteinModelPortal:C7G084 EnsemblProtists:DDB0252613 GeneID:8629212
KEGG:ddi:DDB_G0295793 OMA:APAQYPQ ProtClustDB:CLSZ2735765
Uniprot:C7G084
Length = 657
Score = 152 (58.6 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 59/202 (29%), Positives = 88/202 (43%)
Query: 249 LVSGDCNSCIHLWEPASDATWNVDPNPFIGHAAS-VEDLQWSPTESDVFASCSVDGNIAI 307
+VSGD + I W+P + NV F H S + L +SPT+ + ASC+ D I I
Sbjct: 182 MVSGDDSGNIKYWQPNMN---NV--KIFKAHEQSKIRGLSFSPTDLKL-ASCADDKIIKI 235
Query: 308 WD-TRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAH 366
WD R + + H DV +SW+ S L+ SG D I D K ++
Sbjct: 236 WDFARCTEDNQLV--GHGWDVKCVSWHPQKS-LIVSGGKDNNIKIWDA---KSSQNITT- 288
Query: 367 FEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLSLXXXXXXXXXXXXXTREQVNAP-- 424
HK V+ +EW+ + G+ + +S+D L ++D+ P
Sbjct: 289 LHGHKSTVSKVEWNQN-GNWIVSASSDQLLKVFDIRTMKEMQTFKGHGKEVTALALHPYH 347
Query: 425 EDLPPQLLFIHQGQKDLKELHW 446
EDL F+ G KD K L+W
Sbjct: 348 EDL-----FV-SGDKDGKILYW 363
>SGD|S000002675 [details] [associations]
symbol:CIA1 "Component of cytosolic iron-sulfur protein
assembly (CIA) machinery" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0000055 "ribosomal
large subunit export from nucleus" evidence=IMP] [GO:0016226
"iron-sulfur cluster assembly" evidence=IGI;IMP] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0002098 "tRNA
wobble uridine modification" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000002675 GO:GO:0005829
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BK006938 GO:GO:0016226 EMBL:U51030 GO:GO:0002098 GO:GO:0000055
HOGENOM:HOG000208901 GeneTree:ENSGT00700000104486 OMA:TAIWENI
OrthoDB:EOG4CVKH5 PIR:S70127 RefSeq:NP_010553.3 RefSeq:NP_010559.3
PDB:2HES PDBsum:2HES ProteinModelPortal:Q05583 SMR:Q05583
DIP:DIP-1836N IntAct:Q05583 MINT:MINT-405749 STRING:Q05583
PaxDb:Q05583 PeptideAtlas:Q05583 EnsemblFungi:YDR267C GeneID:851860
GeneID:851866 KEGG:sce:YDR267C KEGG:sce:YDR273W CYGD:YDR267c
EvolutionaryTrace:Q05583 NextBio:969800 Genevestigator:Q05583
GermOnline:YDR267C Uniprot:Q05583
Length = 330
Score = 147 (56.8 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 51/178 (28%), Positives = 83/178 (46%)
Query: 232 HKDEGYAIDWNPVAPGRLVSGDCNSCIHLW--EPASDATWNVDPNPFI-GHAASVEDLQW 288
HK ++ W P L +G +S + +W E ++D T+ +D I GH V+ + W
Sbjct: 57 HKKAIRSVAWRPHT-SLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAW 115
Query: 289 SPTESDVFASCSVDGNIAIWDT-RVGKS--ALMSFKAHNADVNVISWNRLASCLLASGSD 345
S + A+CS D ++ IW+T G+ + + H+ DV + W+ + LLAS S
Sbjct: 116 S-NDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHP-SEALLASSSY 173
Query: 346 DGTFSIHDLRLLKGGDS---VVAHFEYHKHPVTSIEWSPHEGS-TLAVSSADNQLTIW 399
D T +R+ K D VA H+ V S ++ EG L S D+ + +W
Sbjct: 174 DDT-----VRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVW 226
>UNIPROTKB|E2RNA4 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070545 "PeBoW complex" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863 OMA:LQTRFFT
CTD:55759 GeneTree:ENSGT00640000091456 EMBL:AAEX03018031
RefSeq:XP_536036.3 Ensembl:ENSCAFT00000019894 GeneID:478876
KEGG:cfa:478876 Uniprot:E2RNA4
Length = 423
Score = 149 (57.5 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 43/123 (34%), Positives = 55/123 (44%)
Query: 278 GHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLAS 337
GH ++ + WS E S S D I +WD G +L S N N IS++ L
Sbjct: 255 GHKEAISSVLWSDAEE--ICSASWDHTIRVWDVESG--SLKSTLTGNKVFNCISYSPLCK 310
Query: 338 CLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLT 397
LASGS D + D R K G V H VTS++WSP L S DN +
Sbjct: 311 -RLASGSTDRHIRLWDPRT-KDGSLVSLSLTSHTGWVTSLKWSPTHEQQLISGSLDNIVK 368
Query: 398 IWD 400
+WD
Sbjct: 369 LWD 371
Score = 145 (56.1 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 36/112 (32%), Positives = 53/112 (47%)
Query: 239 IDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFAS 298
I ++P+ RL SG + I LW+P + V + H V L+WSPT S
Sbjct: 303 ISYSPLCK-RLASGSTDRHIRLWDPRTKDGSLVSLS-LTSHTGWVTSLKWSPTHEQQLIS 360
Query: 299 CSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFS 350
S+D + +WDTR K+ L AH V + W LL+ G+D+ +S
Sbjct: 361 GSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWTD-TGLLLSGGADNKLYS 411
Score = 127 (49.8 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 56/237 (23%), Positives = 97/237 (40%)
Query: 168 HQGCVNRIRAMSQNPHICA-SWADTGHVQVWDF--RSHLNALAE--SETVAGHGAPQV-L 221
H G V+ I S C+ SW +++W + L E + Q+ L
Sbjct: 188 HAGSVDSIAVDSTGTKFCSGSWDKM--LKIWSAVPTDEEDELEEPTNRPRKKQKTEQLGL 245
Query: 222 NQSPLVKFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAA 281
++P+V GHK+ ++ W+ + S + I +W+ S + + G+
Sbjct: 246 TRTPIVTLSGHKEAISSVLWSDAE--EICSASWDHTIRVWDVESGSL----KSTLTGNKV 299
Query: 282 SVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFK--AHNADVNVISWNRLASCL 339
+ +SP + AS S D +I +WD R +L+S +H V + W+
Sbjct: 300 -FNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSLKWSPTHEQQ 357
Query: 340 LASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQL 396
L SGS D + D R K + + H+ V S++W+ + L ADN+L
Sbjct: 358 LISGSLDNIVKLWDTRSCK---APLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKL 409
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 139 (54.0 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 46/162 (28%), Positives = 79/162 (48%)
Query: 245 APGRLVSGDCNSC-IHLWEPASDATWNVDPNPFI---GHAASVEDLQWSPTESDVFASCS 300
A GRL++ + C ++LW + N PN + GH + VE ++ + E + A S
Sbjct: 35 ASGRLLATGGDDCRVNLW------SIN-KPNCIMSLTGHTSPVESVRLNTPEELIVAG-S 86
Query: 301 VDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGG 360
G+I +WD K L + H A++ + ++ +ASGS D + D+R KG
Sbjct: 87 QSGSIRVWDLEAAK-ILRTLMGHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRR-KG- 142
Query: 361 DSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLS 402
V + H V + +SP +G LA ++ D+ + +WDL+
Sbjct: 143 --CVFRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDLT 181
Score = 121 (47.7 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 42/159 (26%), Positives = 72/159 (45%)
Query: 226 LVKFGGHKDEGYAIDWNPVAPGRL-VSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVE 284
++ GH ++ N P L V+G + I +W+ + +GH A++
Sbjct: 60 IMSLTGHTSPVESVRLN--TPEELIVAGSQSGSIRVWDLEAAKILRT----LMGHKANIC 113
Query: 285 DLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGS 344
L + P + AS S D NI +WD R K + ++ H+ V + ++ L AS +
Sbjct: 114 SLDFHPY-GEFVASGSQDTNIKLWDIR-RKGCVFRYRGHSQAVRCLRFSPDGKWL-ASAA 170
Query: 345 DDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHE 383
DD T + DL K +++ F H PV +E+ P+E
Sbjct: 171 DDHTVKLWDLTAGK----MMSEFPGHTGPVNVVEFHPNE 205
Score = 111 (44.1 bits), Expect = 0.00062, P = 0.00062
Identities = 30/126 (23%), Positives = 57/126 (45%)
Query: 277 IGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGK-SALMSFKAHNADVNVISWNRL 335
+ HA++V L + A+ D + +W + K + +MS H + V + N
Sbjct: 21 VAHASNVSSLVLGKASGRLLATGGDDCRVNLWS--INKPNCIMSLTGHTSPVESVRLNTP 78
Query: 336 ASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQ 395
L+ +GS G+ + DL K ++ HK + S+++ P+ G +A S D
Sbjct: 79 EE-LIVAGSQSGSIRVWDLEAAK----ILRTLMGHKANICSLDFHPY-GEFVASGSQDTN 132
Query: 396 LTIWDL 401
+ +WD+
Sbjct: 133 IKLWDI 138
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 149 (57.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 72/244 (29%), Positives = 109/244 (44%)
Query: 168 HQGCVNRIRAMSQNPHICASWADTGHVQVWDFRSH-LNALAES-----ETVAGHGAPQVL 221
H V + A S N + AS + +++W+ S L E E+VA Q+
Sbjct: 82 HSSSVQSV-AFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQLW 140
Query: 222 NQSPLVKFGGHKDEGYAIDWN-PVA--P-GRLV-SGDCNSCIHLWEPASDATWNVDPNPF 276
N P + H EG++ DW VA P G+L+ SG I LW+ AT + +
Sbjct: 141 N--PAIGSLKHTIEGHS-DWVLSVAFSPDGQLLASGSAEKTIKLWD---SATCGLK-HTL 193
Query: 277 IGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLA 336
GH+ V L +SP + + AS S D I +WD G S + + H+ + ++++
Sbjct: 194 GGHSNWVLPLVFSP-DGRLLASGSNDATIKLWDPPSG-SLKHTLEGHSNKIESLAFSPNG 251
Query: 337 SCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQL 396
LLASGS D T + D G S + H V S+ +SP + L S DN +
Sbjct: 252 Q-LLASGSSDATIKLWDTAT--G--SFRHTLKGHSDMVLSVVFSP-DSQLLESGSGDNTI 305
Query: 397 TIWD 400
+WD
Sbjct: 306 KLWD 309
Score = 117 (46.2 bits), Expect = 0.00067, P = 0.00067
Identities = 36/132 (27%), Positives = 61/132 (46%)
Query: 253 DCNSCIH--LWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNIAIWDT 310
DC + + L P + W + GH+ +E + +SP + + AS S D I +WD
Sbjct: 12 DCINTLQSTLQRPKVEDNWGPELQTLEGHSDWIETVTFSP-DGRLLASGSNDTTIKLWDP 70
Query: 311 RVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYH 370
G + + H++ V ++++ LLASGS D T + + DS+ E H
Sbjct: 71 ASG-GLKQTLEGHSSSVQSVAFSPNGQ-LLASGSSDTTIKLWN----SASDSLKHTMEGH 124
Query: 371 KHPVTSIEWSPH 382
V S+ +SP+
Sbjct: 125 SDRVESVAFSPN 136
>CGD|CAL0005013 [details] [associations]
symbol:SWD3 species:5476 "Candida albicans" [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0042800 "histone
methyltransferase activity (H3-K4 specific)" evidence=IEA]
[GO:0051568 "histone H3-K4 methylation" evidence=IEA] [GO:0006348
"chromatin silencing at telomere" evidence=IEA] [GO:0000723
"telomere maintenance" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005013 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000155
RefSeq:XP_712497.1 ProteinModelPortal:Q59S83 STRING:Q59S83
GeneID:3645890 KEGG:cal:CaO19.3457 Uniprot:Q59S83
Length = 383
Score = 148 (57.2 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 34/124 (27%), Positives = 62/124 (50%)
Query: 278 GHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLAS 337
GH + D+ +SP S++ ASCS D I +W+ + + + H + + + + +
Sbjct: 66 GHTKGISDIVYSPINSNILASCSDDLTIRLWNI-TQQRCIKLLRKHTYHITTLKFTQKGN 124
Query: 338 CLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLT 397
L+ SGS D T +I D+ G ++ H PV+SI +P + S + +S D +
Sbjct: 125 ILI-SGSSDETITIWDIT--SNGGKILTTLAAHSDPVSSIALTPDD-SIIVSASYDGLMR 180
Query: 398 IWDL 401
++DL
Sbjct: 181 LFDL 184
Score = 118 (46.6 bits), Expect = 0.00043, P = 0.00043
Identities = 31/117 (26%), Positives = 64/117 (54%)
Query: 286 LQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSD 345
+++SP + FA S +G I I++T GK + + H ++ I ++ + S +LAS SD
Sbjct: 32 IKFSPNGQN-FACSSSNGKIYIYNTTTGK-LITTLSGHTKGISDIVYSPINSNILASCSD 89
Query: 346 DGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLS 402
D T + ++ + + H + +T+++++ +G+ L S+D +TIWD++
Sbjct: 90 DLTIRLWNITQQR----CIKLLRKHTYHITTLKFT-QKGNILISGSSDETITIWDIT 141
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 139 (54.0 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 46/162 (28%), Positives = 79/162 (48%)
Query: 245 APGRLVSGDCNSC-IHLWEPASDATWNVDPNPFI---GHAASVEDLQWSPTESDVFASCS 300
A GRL++ + C ++LW + N PN + GH + VE ++ + E + A S
Sbjct: 31 ASGRLLATGGDDCRVNLW------SIN-KPNCIMSLTGHTSPVESVRLNTPEELIVAG-S 82
Query: 301 VDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGG 360
G+I +WD K L + H A++ + ++ +ASGS D + D+R KG
Sbjct: 83 QSGSIRVWDLEAAK-ILRTLMGHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRR-KG- 138
Query: 361 DSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLS 402
V + H V + +SP +G LA ++ D+ + +WDL+
Sbjct: 139 --CVFRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDLT 177
Score = 126 (49.4 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 46/169 (27%), Positives = 77/169 (45%)
Query: 226 LVKFGGHKDEGYAIDWNPVAPGRL-VSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVE 284
++ GH ++ N P L V+G + I +W+ + +GH A++
Sbjct: 56 IMSLTGHTSPVESVRLN--TPEELIVAGSQSGSIRVWDLEAAKILRT----LMGHKANIC 109
Query: 285 DLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGS 344
L + P + AS S D NI +WD R K + ++ H+ V + ++ L AS +
Sbjct: 110 SLDFHPY-GEFVASGSQDTNIKLWDIR-RKGCVFRYRGHSQAVRCLRFSPDGKWL-ASAA 166
Query: 345 DDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSAD 393
DD T + DL K +++ F H PV +E+ P+E LA S+D
Sbjct: 167 DDHTVKLWDLTAGK----MMSEFPGHTGPVNVVEFHPNE-YLLASGSSD 210
Score = 111 (44.1 bits), Expect = 0.00064, P = 0.00064
Identities = 30/126 (23%), Positives = 57/126 (45%)
Query: 277 IGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGK-SALMSFKAHNADVNVISWNRL 335
+ HA++V L + A+ D + +W + K + +MS H + V + N
Sbjct: 17 VAHASNVSSLVLGKASGRLLATGGDDCRVNLWS--INKPNCIMSLTGHTSPVESVRLNTP 74
Query: 336 ASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQ 395
L+ +GS G+ + DL K ++ HK + S+++ P+ G +A S D
Sbjct: 75 EE-LIVAGSQSGSIRVWDLEAAK----ILRTLMGHKANICSLDFHPY-GEFVASGSQDTN 128
Query: 396 LTIWDL 401
+ +WD+
Sbjct: 129 IKLWDI 134
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 146 (56.5 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 48/173 (27%), Positives = 84/173 (48%)
Query: 229 FGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQW 288
F GH+D ++D++ + +L SG +SC+ +W + +GH +V +Q+
Sbjct: 16 FRGHRDAITSVDFS-LNKKQLASGSMDSCLKIWSMKPQ----MRAYCLVGHKDAVMCVQF 70
Query: 289 SPTESDVFASCSVDGNIAIWDTRV-GKSALMSFKAHNADVNVISWNRLASCLLASGSDDG 347
SP+ + AS S D + +W V G+S + FKAH A V + ++ L+ + SDD
Sbjct: 71 SPS-GHLVASGSRDKTVCLWVPSVKGESTV--FKAHTATVRSVHFSSDGQSLVTA-SDDK 126
Query: 348 TFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWD 400
T + + K S+ H + V +SP +G +A +S D + +WD
Sbjct: 127 TIKVWTVHRQKFLFSLSQHINW----VRCARFSP-DGRLIASASDDKTVKLWD 174
Score = 137 (53.3 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 40/155 (25%), Positives = 73/155 (47%)
Query: 251 SGDCNSCIHLWEPASDATWNVDPNPFI----GHAASVEDLQWSPTESDVFASCSVDGNIA 306
S D S + + + W V F+ H V ++SP + + AS S D +
Sbjct: 113 SSDGQSLVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSP-DGRLIASASDDKTVK 171
Query: 307 IWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAH 366
+WD + + + SF H N + ++ +C+ A+G+D T + D+R+ + ++ H
Sbjct: 172 LWD-KTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDK-TVKVWDVRM----NRLLQH 225
Query: 367 FEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDL 401
++ H V S+ + P G+ L +S D+ L I DL
Sbjct: 226 YQVHTAAVNSLSFHP-SGNYLITASNDSTLKILDL 259
Score = 130 (50.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 47/176 (26%), Positives = 76/176 (43%)
Query: 231 GHKDEGYAIDWNPVAPGRLV-SGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWS 289
GHKD + ++P G LV SG + + LW P+ V F H A+V + +S
Sbjct: 60 GHKDAVMCVQFSP--SGHLVASGSRDKTVCLWVPSVKGESTV----FKAHTATVRSVHFS 113
Query: 290 PTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLA--SCLLASGSDDG 347
++ + S D I +W K L S H +N + R + L+AS SDD
Sbjct: 114 -SDGQSLVTASDDKTIKVWTVHRQKF-LFSLSQH---INWVRCARFSPDGRLIASASDDK 168
Query: 348 TFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLSL 403
T + D + S H + H +E+ P G+ +A + D + +WD+ +
Sbjct: 169 TVKLWDKTSRECIHSFCEHGGFANH----VEFHP-SGTCIAAAGTDKTVKVWDVRM 219
>UNIPROTKB|B0W517 [details] [associations]
symbol:CPIJ001500 "Ribosome biogenesis protein WDR12
homolog" species:7176 "Culex quinquefasciatus" [GO:0000463
"maturation of LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070545 GO:GO:0000463
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
HAMAP:MF_03029 EMBL:DS231840 RefSeq:XP_001843801.1
UniGene:Cpi.10498 ProteinModelPortal:B0W517 STRING:B0W517
GeneID:6033337 KEGG:cqu:CpipJ_CPIJ001500 VectorBase:CPIJ001500
Uniprot:B0W517
Length = 425
Score = 126 (49.4 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 28/115 (24%), Positives = 54/115 (46%)
Query: 247 GRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNIA 306
G +++ + + L++P S+ V N ++GH V+ ++WS T +F S + D ++
Sbjct: 313 GLIITASPDKNLRLYDPKSNQGTLVK-NTYLGHTQWVQSVRWSTTNEYLFVSGAYDNHVK 371
Query: 307 IWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGD 361
+WD R K+ + H V W+ L SG D + + ++ GG+
Sbjct: 372 LWDYRSPKAPIFELIGHEDKVLACDWSNPRFIL--SGGSDNSVRVFKSKIAIGGE 424
Score = 66 (28.3 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 16/58 (27%), Positives = 34/58 (58%)
Query: 158 TPILQLRKVAHQGCVNRIRAMSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGH 215
TP++ L H+ C++ ++ + N + +SW T +++WD LN + +SE ++G+
Sbjct: 251 TPLMTL--AGHRECISGVQWIDDNTLVTSSWDHT--IKIWDLA--LNGI-KSE-ISGN 300
>TAIR|locus:2143636 [details] [associations]
symbol:CDC20.5 "AT5G27570" species:3702 "Arabidopsis
thaliana" [GO:0004871 "signal transducer activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0051301
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:AC007478 KO:K03363
HOGENOM:HOG000195514 GO:GO:0080008 IPI:IPI00534046
RefSeq:NP_198109.1 UniGene:At.65557 ProteinModelPortal:Q3E906
SMR:Q3E906 IntAct:Q3E906 STRING:Q3E906 PRIDE:Q3E906
EnsemblPlants:AT5G27570.1 GeneID:832817 KEGG:ath:AT5G27570
TAIR:At5g27570 InParanoid:Q3E906 OMA:ANESHSA PhylomeDB:Q3E906
ProtClustDB:CLSN2686954 Genevestigator:Q3E906 Uniprot:Q3E906
Length = 411
Score = 148 (57.2 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 51/186 (27%), Positives = 90/186 (48%)
Query: 223 QSPLVK-FGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDP---NPFIG 278
+S +V+ + GH +E + W+ +L SG ++ +H+W+ S A+ N + F
Sbjct: 207 RSSIVETYLGHTEEVCGLKWSESGK-KLASGGNDNVVHIWDHRSVASSNPTRQWLHRFEE 265
Query: 279 HAASVEDLQWSPTESDVFASCSV--DGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLA 336
H A+V L W P ++ + A+ DG I W+T G + L S + + V + W++
Sbjct: 266 HTAAVRALAWCPFQASLLATGGGVGDGKIKFWNTHTG-ACLNSVET-GSQVCSLLWSKSE 323
Query: 337 SCLLASGSDDGTFSIHDLRLLKGGDSV-VAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQ 395
LL+S F+ + L L K V +A H V + SP +G T+A ++ D
Sbjct: 324 RELLSSHG----FTQNQLTLWKYPSMVKMAELNGHTSRVLFMAQSP-DGCTVASAAGDET 378
Query: 396 LTIWDL 401
L +W++
Sbjct: 379 LRLWNV 384
Score = 134 (52.2 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 52/218 (23%), Positives = 90/218 (41%)
Query: 189 ADTGHVQVWDF-RSHLNALAESETVAGHGAPQVLNQSPLVKFGGHKDEGYAIDWNPVAPG 247
AD ++ + D+ S++ A+A +TV A LV + +I+W
Sbjct: 90 ADDFYLNLLDWGSSNVLAIALGDTVYLWDASSGSTYK-LVTIDEEEGPVTSINWTQDGLD 148
Query: 248 RLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNIAI 307
+ D NS + LW+ S+ GH + V L W+ + + + +DG I
Sbjct: 149 LAIGLD-NSEVQLWDCVSNRQVRTLRG---GHESRVGSLAWN---NHILTTGGMDGKIVN 201
Query: 308 WDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSV---V 364
D R+ S + ++ H +V + W+ LASG +D I D R + + +
Sbjct: 202 NDVRIRSSIVETYLGHTEEVCGLKWSESGK-KLASGGNDNVVHIWDHRSVASSNPTRQWL 260
Query: 365 AHFEYHKHPVTSIEWSPHEGSTLAVSSA--DNQLTIWD 400
FE H V ++ W P + S LA D ++ W+
Sbjct: 261 HRFEEHTAAVRALAWCPFQASLLATGGGVGDGKIKFWN 298
>MGI|MGI:2685187 [details] [associations]
symbol:Sec31b "Sec31 homolog B (S. cerevisiae)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0044432 "endoplasmic reticulum part" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2685187 GO:GO:0012507 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005789
GO:GO:0015031 eggNOG:NOG248389 HOGENOM:HOG000230582
HOVERGEN:HBG055626 KO:K14005 GeneTree:ENSGT00390000003175 CTD:25956
OMA:RLECLYE OrthoDB:EOG470TGM EMBL:AK158017 EMBL:AC151478
EMBL:BC042701 IPI:IPI00667569 IPI:IPI00854010 RefSeq:NP_001028515.1
UniGene:Mm.329873 ProteinModelPortal:Q3TZ89 SMR:Q3TZ89
PhosphoSite:Q3TZ89 PaxDb:Q3TZ89 PRIDE:Q3TZ89
Ensembl:ENSMUST00000063632 Ensembl:ENSMUST00000111985 GeneID:240667
KEGG:mmu:240667 UCSC:uc008hpu.1 UCSC:uc012bmg.1 InParanoid:Q3TZ89
NextBio:384667 Bgee:Q3TZ89 CleanEx:MM_SEC31B Genevestigator:Q3TZ89
Uniprot:Q3TZ89
Length = 1158
Score = 154 (59.3 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 46/201 (22%), Positives = 91/201 (45%)
Query: 208 ESETVAGHGAPQVLN--QSPLV-KFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPA 264
++ T+ + VL+ + PL+ + H A+D+NP L SG +S I +W+
Sbjct: 93 DNGTLTLYNVTHVLSSGKEPLIAQKQKHTGAVRALDFNPFQGNLLASGASDSEIFIWD-L 151
Query: 265 SDATWNVDPNPFIGHAAS-VEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAH 323
+ + + P P + ++ L W+ + AS G +WD R + ++ +H
Sbjct: 152 NHLSVPMTPGPKSQNPPEDIKALSWNLQVQHILASAHPSGKAVVWDLRKNEP-IIKVSSH 210
Query: 324 NADVNV--ISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSP 381
++ +N ++WN + L S+D + L L+ S + E H + S+ W+
Sbjct: 211 SSRMNCSGLAWNPDIATQLVLCSEDDQLPVIQLWDLRFASSPLKVLESHSRGILSMSWNQ 270
Query: 382 HEGSTLAVSSADNQLTIWDLS 402
+ L ++ D+Q+ W+LS
Sbjct: 271 ADAELLLSTAKDSQIFCWNLS 291
>ASPGD|ASPL0000003994 [details] [associations]
symbol:AN6160 species:162425 "Emericella nidulans"
[GO:0005847 "mRNA cleavage and polyadenylation specificity factor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:2000045
"regulation of G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0000070 "mitotic sister chromatid segregation" evidence=IEA]
[GO:0031124 "mRNA 3'-end processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0007059 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
GO:GO:0006397 EMBL:BN001301 EMBL:AACD01000105 KO:K15542
RefSeq:XP_663764.1 ProteinModelPortal:Q5AZX0 STRING:Q5AZX0
EnsemblFungi:CADANIAT00006850 GeneID:2870757 KEGG:ani:AN6160.2
HOGENOM:HOG000213918 OMA:RDICILR OrthoDB:EOG4QVGMD Uniprot:Q5AZX0
Length = 567
Score = 150 (57.9 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 40/165 (24%), Positives = 74/165 (44%)
Query: 232 HKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPT 291
H D + W+P + + +S ++ + ++ D T GH V+ W PT
Sbjct: 154 HHDAVRDLAWSP-SDTKFLSASDDTTLKIY----DFTARTCDTVLTGHNWDVKSCDWHPT 208
Query: 292 ESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSI 351
+ + S S D + WD R + L + +H V ++R+ + LLA+ S D T +
Sbjct: 209 KG-LLVSGSKDHQVKFWDPRTAR-CLTTLHSHKNTVTATKFSRVNNNLLATSSRDQTARV 266
Query: 352 HDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQL 396
DLR+++ + H+ P++++ W P S ++ S D L
Sbjct: 267 FDLRMMRD----ICILRGHEKPISTLTWHPVHCSLISTGSEDGSL 307
Score = 139 (54.0 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 49/174 (28%), Positives = 73/174 (41%)
Query: 230 GGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWS 289
GGH E + + WN A D + W P + +D H +V DL WS
Sbjct: 112 GGHTGE-FML-WNGTAFNFETVMDKGD-VKYWRPNFNNVETIDD----AHHDAVRDLAWS 164
Query: 290 PTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTF 349
P+++ F S S D + I+D ++ HN DV W+ LL SGS D
Sbjct: 165 PSDTK-FLSASDDTTLKIYDF-TARTCDTVLTGHNWDVKSCDWHPTKG-LLVSGSKDHQV 221
Query: 350 SIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLSL 403
D R + + HK+ VT+ ++S + LA SS D ++DL +
Sbjct: 222 KFWDPRTAR----CLTTLHSHKNTVTATKFSRVNNNLLATSSRDQTARVFDLRM 271
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 147 (56.8 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 40/125 (32%), Positives = 64/125 (51%)
Query: 278 GHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLAS 337
GH V ++P +S + S S D ++ IWD + G + + AH+ V+ +S+NR S
Sbjct: 169 GHNNYVFCCNFNP-QSSLVVSGSFDESVRIWDVKTGM-CIKTLPAHSDPVSAVSFNRDGS 226
Query: 338 CLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLT 397
L+ASGS DG I D G + + PV +++SP+ G + S+ D+ L
Sbjct: 227 -LIASGSYDGLVRIWDTA---NGQCIKTLVDDENPPVAFVKFSPN-GKYILASNLDSTLK 281
Query: 398 IWDLS 402
+WD S
Sbjct: 282 LWDFS 286
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 147 (56.8 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 40/125 (32%), Positives = 64/125 (51%)
Query: 278 GHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLAS 337
GH V ++P +S + S S D ++ IWD + G + + AH+ V+ +S+NR S
Sbjct: 169 GHNNYVFCCNFNP-QSSLVVSGSFDESVRIWDVKTGM-CIKTLPAHSDPVSAVSFNRDGS 226
Query: 338 CLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLT 397
L+ASGS DG I D G + + PV +++SP+ G + S+ D+ L
Sbjct: 227 -LIASGSYDGLVRIWDTA---NGQCIKTLVDDENPPVAFVKFSPN-GKYILASNLDSTLK 281
Query: 398 IWDLS 402
+WD S
Sbjct: 282 LWDFS 286
>UNIPROTKB|Q8IU52 [details] [associations]
symbol:TUWD12 "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 HOVERGEN:HBG057502
UniGene:Hs.604487 HGNC:HGNC:30836 HSSP:Q02793 EMBL:AB053266
EMBL:AB053276 IPI:IPI00796655 SMR:Q8IU52 STRING:Q8IU52
Ensembl:ENST00000393179 Uniprot:Q8IU52
Length = 348
Score = 146 (56.5 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 55/215 (25%), Positives = 100/215 (46%)
Query: 247 GRL-VSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNI 305
GRL VS + I +W+ + N + + +G A V+ ++P+ + + AS D +
Sbjct: 26 GRLIVSCSEDKTIKIWDTTNKQCVN-NFSDSVGFANFVD---FNPSGTCI-ASAGSDQTV 80
Query: 306 AIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVA 365
+WD RV K L ++ H+ VN IS++ + L+ + SD GT I DL L+G ++
Sbjct: 81 KVWDVRVNK-LLQHYQVHSGGVNCISFHPSGNYLITASSD-GTLKILDL--LEG--RLIY 134
Query: 366 HFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLSLXXXXXXXXXXXXXTREQVNAPE 425
+ H PV ++ +S G A AD Q+ +W + R ++P
Sbjct: 135 TLQGHTGPVFTVSFSKG-GELFASGGADTQVLLWRTNFDELHCKGLTKRNLKRLHFDSPP 193
Query: 426 ---DLPPQLLFIHQGQKDLKELHWHTQVPGMIVST 457
D+ P+ H+ + + E++ +V + +ST
Sbjct: 194 HLLDIYPRTPHPHEEKVETVEINPKLEVIDLQIST 228
Score = 141 (54.7 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 38/123 (30%), Positives = 61/123 (49%)
Query: 279 HAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASC 338
H V ++SP + + SCS D I IWDT K + +F N + +N +C
Sbjct: 13 HTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDT-TNKQCVNNFSDSVGFANFVDFNPSGTC 70
Query: 339 LLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTI 398
+ ++GSD T + D+R+ K ++ H++ H V I + P G+ L +S+D L I
Sbjct: 71 IASAGSDQ-TVKVWDVRVNK----LLQHYQVHSGGVNCISFHP-SGNYLITASSDGTLKI 124
Query: 399 WDL 401
DL
Sbjct: 125 LDL 127
>UNIPROTKB|H3BRJ0 [details] [associations]
symbol:CORO1A "Coronin" species:9606 "Homo sapiens"
[GO:0005884 "actin filament" evidence=IEA] [GO:0001772
"immunological synapse" evidence=IEA] [GO:0006816 "calcium ion
transport" evidence=IEA] [GO:0007015 "actin filament organization"
evidence=IEA] [GO:0008360 "regulation of cell shape" evidence=IEA]
[GO:0030335 "positive regulation of cell migration" evidence=IEA]
[GO:0030595 "leukocyte chemotaxis" evidence=IEA] [GO:0030833
"regulation of actin filament polymerization" evidence=IEA]
[GO:0031252 "cell leading edge" evidence=IEA] [GO:0032796 "uropod
organization" evidence=IEA] [GO:0034097 "response to cytokine
stimulus" evidence=IEA] [GO:0042102 "positive regulation of T cell
proliferation" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0043029 "T cell homeostasis"
evidence=IEA] [GO:0048873 "homeostasis of number of cells within a
tissue" evidence=IEA] [GO:0051015 "actin filament binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0031252 GO:GO:0007015 Gene3D:2.130.10.10
PROSITE:PS00678 GO:GO:0008360 InterPro:IPR019775 GO:GO:0015629
GO:GO:0034097 GO:GO:0006816 GO:GO:0030335 GO:GO:0048873
GO:GO:0042102 GO:GO:0043029 GO:GO:0030833 GO:GO:0001772
GO:GO:0030595 GO:GO:0032796 InterPro:IPR015505 InterPro:IPR015048
PANTHER:PTHR10856 Pfam:PF08953 HGNC:HGNC:2252 EMBL:AC012645
Ensembl:ENST00000563778 Bgee:H3BRJ0 Uniprot:H3BRJ0
Length = 249
Score = 142 (55.0 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 37/139 (26%), Positives = 63/139 (45%)
Query: 268 TWNVDPN-PFI-GHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVG------KSALMS 319
T VD N P + GH A V D+ W P +V AS S D + +W+ G + +++
Sbjct: 67 TGRVDKNAPTVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLMLPLREPVVT 126
Query: 320 FKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEW 379
+ H V +++W+ A +L S D + D+ G + E H + S++W
Sbjct: 127 LEGHTKRVGIVAWHTTAQNVLLSAGCDNVIMVWDVGT--GAAMLTLGPEVHPDTIYSVDW 184
Query: 380 SPHEGSTLAVSSADNQLTI 398
S +G + S D ++ I
Sbjct: 185 S-RDGGLICTSCRDKRVRI 202
>FB|FBgn0030011 [details] [associations]
symbol:Gbeta5 "Gbeta5" species:7227 "Drosophila melanogaster"
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS;NAS]
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 InterPro:IPR016346 PIRSF:PIRSF002394
KO:K04539 OMA:ATDGLHE EMBL:BT004841 RefSeq:NP_572452.1
UniGene:Dm.11050 SMR:Q9W3J1 IntAct:Q9W3J1 STRING:Q9W3J1
EnsemblMetazoa:FBtr0071189 GeneID:31744 KEGG:dme:Dmel_CG10763
UCSC:CG10763-RA CTD:31744 FlyBase:FBgn0030011 InParanoid:Q9W3J1
OrthoDB:EOG4TTF0F GenomeRNAi:31744 NextBio:775120 Uniprot:Q9W3J1
Length = 358
Score = 146 (56.5 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 46/161 (28%), Positives = 75/161 (46%)
Query: 243 PVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTES-DVFASCSV 301
P + ++++G +S LW+ S F GH+ V + +P E+ + F S S
Sbjct: 167 PNSDQQILTGSGDSTCALWDVESGQLLQ----SFHGHSGDVMAIDLAPNETGNTFVSGSC 222
Query: 302 DGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGD 361
D IWD R G + SF+ H +DVN + ++ + A+GSDD + ++D+R D
Sbjct: 223 DRMAFIWDMRSGH-VVQSFEGHQSDVNSVKFHPCGDAI-ATGSDDSSCRLYDMR----AD 276
Query: 362 SVVAHFEYHK--HPVTSIEWSPHEGSTLAVSSADNQLTIWD 400
VA F V S+++S G L D + +WD
Sbjct: 277 REVAVFAKESIIFGVNSVDFSV-SGRLLFAGYNDYTVNLWD 316
>SGD|S000006382 [details] [associations]
symbol:PRP4 "Splicing factor" species:4932 "Saccharomyces
cerevisiae" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IPI] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 SGD:S000006382 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006949 GO:GO:0000398
InterPro:IPR027106 PANTHER:PTHR19846 EMBL:U25842 GO:GO:0046540
EMBL:M26597 HOGENOM:HOG000157615 KO:K12662
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:M28518 PIR:A32569
RefSeq:NP_015504.1 ProteinModelPortal:P20053 SMR:P20053
DIP:DIP-2607N IntAct:P20053 MINT:MINT-423902 STRING:P20053
PaxDb:P20053 EnsemblFungi:YPR178W GeneID:856307 KEGG:sce:YPR178W
CYGD:YPR178w OrthoDB:EOG4V1B90 NextBio:981676 Genevestigator:P20053
GermOnline:YPR178W Uniprot:P20053
Length = 465
Score = 148 (57.2 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 48/190 (25%), Positives = 86/190 (45%)
Query: 216 GAPQVLNQS---PLV-KFGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNV 271
G QVLN PL K H + AIDW+P + +++S + I ++ +++
Sbjct: 197 GDLQVLNSQTLQPLTQKLDSHVGKIGAIDWHPDSNNQMISCAEDGLIKNFQYSNEEGGLR 256
Query: 272 DPNPFIGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVIS 331
+GH + D+++ P+ + S S D +WD + L+ + H+ V +S
Sbjct: 257 LLGDLVGHERRISDVKYHPSGKFI-GSASHDMTWRLWDASTHQELLLQ-EGHDKGVFSLS 314
Query: 332 WNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSS 391
+ S L+ SG D + D+R G V+ H P+ ++ WSP+ G +A
Sbjct: 315 FQCDGS-LVCSGGMDSLSMLWDIR---SGSKVMT-LAGHSKPIYTVAWSPN-GYQVATGG 368
Query: 392 ADNQLTIWDL 401
D + +WD+
Sbjct: 369 GDGIINVWDI 378
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 151 (58.2 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 58/233 (24%), Positives = 99/233 (42%)
Query: 231 GHKDEGYAIDWNP-VAP-GR-LVSGDCNSCIHLWEPASDATWNVDP-NPFIGHAASVEDL 286
G+K Y + W+ +P G VSG + LW AT + P F GH A V
Sbjct: 578 GYKGHNYPV-WDTQFSPYGYYFVSGGHDRVARLW-----ATDHYQPLRIFAGHLADVNCT 631
Query: 287 QWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDD 346
++ P S+ A+ S D + +WD G + + F H ++ ++++ LA+G+ D
Sbjct: 632 RFHPN-SNYVATGSADRTVRLWDVLNG-NCVRIFTGHKGPIHSLTFSPNGR-FLATGATD 688
Query: 347 GTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLSLXXX 406
G + D+ G +V + H V S+ +S +G LA S DN + +WD ++
Sbjct: 689 GRVLLWDI----GHGLMVGELKGHTDTVCSLRFS-RDGEILASGSMDNTVRLWD-AIKAF 742
Query: 407 XXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQKDLKELHWHTQVPGMIVSTAA 459
+N PE+ LL + K +H H ++++ A
Sbjct: 743 EDLETDDFTTATGHINLPENSQELLLGTYM-TKSTPVVHLHFTRRNLVLAAGA 794
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 151 (58.2 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 58/233 (24%), Positives = 99/233 (42%)
Query: 231 GHKDEGYAIDWNP-VAP-GR-LVSGDCNSCIHLWEPASDATWNVDP-NPFIGHAASVEDL 286
G+K Y + W+ +P G VSG + LW AT + P F GH A V
Sbjct: 580 GYKGHNYPV-WDTQFSPYGYYFVSGGHDRVARLW-----ATDHYQPLRIFAGHLADVNCT 633
Query: 287 QWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDD 346
++ P S+ A+ S D + +WD G + + F H ++ ++++ LA+G+ D
Sbjct: 634 RFHPN-SNYVATGSADRTVRLWDVLNG-NCVRIFTGHKGPIHSLTFSPNGR-FLATGATD 690
Query: 347 GTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLSLXXX 406
G + D+ G +V + H V S+ +S +G LA S DN + +WD ++
Sbjct: 691 GRVLLWDI----GHGLMVGELKGHTDTVCSLRFS-RDGEILASGSMDNTVRLWD-AIKAF 744
Query: 407 XXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQKDLKELHWHTQVPGMIVSTAA 459
+N PE+ LL + K +H H ++++ A
Sbjct: 745 EDLETDDFTTATGHINLPENSQELLLGTYM-TKSTPVVHLHFTRRNLVLAAGA 796
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 151 (58.2 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 59/233 (25%), Positives = 98/233 (42%)
Query: 231 GHKDEGYAIDWNP-VAP-GR-LVSGDCNSCIHLWEPASDATWNVDP-NPFIGHAASVEDL 286
G+K Y + W+ +P G VSG + LW AT + P F GH A V
Sbjct: 581 GYKGHNYPV-WDTQFSPYGYYFVSGGHDRVARLW-----ATDHYQPLRIFAGHLADVNCT 634
Query: 287 QWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDD 346
++ P S+ A+ S D + +WD G + + F H ++ ++++ LA+G+ D
Sbjct: 635 RYHPN-SNYVATGSADRTVRLWDVLNG-NCVRIFTGHKGPIHSLTFSPNGR-FLATGATD 691
Query: 347 GTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLSLXXX 406
G + D+ G +V + H V S+ +S +G LA S DN + +WD
Sbjct: 692 GRVLLWDI----GHGLMVGELKGHTDTVCSLRFS-RDGEILASGSMDNTVRLWDAVKAFE 746
Query: 407 XXXXXXXXXXTREQVNAPEDLPPQLLFIHQGQKDLKELHWHTQVPGMIVSTAA 459
T +N PE+ LL + K +H H ++++ A
Sbjct: 747 DLETDDFTTATGH-INLPENSQELLLGTYM-TKSTPVVHLHFTRRNLVLAAGA 797
>UNIPROTKB|Q5H7C0 [details] [associations]
symbol:CDC20 "Cell division cycle protein 20 homolog"
species:9823 "Sus scrofa" [GO:0031915 "positive regulation of
synaptic plasticity" evidence=ISS] [GO:0090129 "positive regulation
of synapse maturation" evidence=ISS] [GO:0051488 "activation of
anaphase-promoting complex activity" evidence=ISS] [GO:0005680
"anaphase-promoting complex" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005815 "microtubule organizing
center" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
[GO:0040020 "regulation of meiosis" evidence=IEA] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0008022 "protein
C-terminus binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016567 GO:GO:0005815
GO:GO:0005680 GO:GO:0000922 GO:GO:0031145 GO:GO:0090129
GO:GO:0031915 GO:GO:0040020 GO:GO:0051488 KO:K03363 CTD:991
HOGENOM:HOG000195514 HOVERGEN:HBG001024 OMA:RTPGKSN
OrthoDB:EOG4CC414 GeneTree:ENSGT00580000081599 EMBL:AB192873
RefSeq:NP_001116566.1 UniGene:Ssc.17001 ProteinModelPortal:Q5H7C0
STRING:Q5H7C0 Ensembl:ENSSSCT00000004368 GeneID:397379
KEGG:ssc:397379 Uniprot:Q5H7C0
Length = 499
Score = 145 (56.1 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 51/174 (29%), Positives = 86/174 (49%)
Query: 231 GHKDEGYAIDWNPVAPGR-LVSGDCNSCIHLWEPA-SDATWNVDPNPFIGHAASVEDLQW 288
GH E + W P GR L SG ++ +++W A + W V F H +V+ + W
Sbjct: 307 GHSQEVCGLRWAP--DGRHLASGGNDNLVNVWPSAPGEGGW-VPLQTFTQHQGAVKAVAW 363
Query: 289 SPTESDVFASC--SVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDD 346
P +S+V A+ + D +I IW+ G + L + AH+ +++ W+ L+ SG
Sbjct: 364 CPWQSNVLATGGGTSDRHIRIWNVCSG-ACLSAVDAHSQVCSIL-WSPHYKELI-SGHG- 419
Query: 347 GTFSIHDLRLLKGGDSV-VAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
F+ + L + K VA + H V S+ SP +G+T+A ++AD L +W
Sbjct: 420 --FAQNQLVIWKYPTMAKVAELKGHTARVLSLTMSP-DGATVASAAADETLRLW 470
Score = 135 (52.6 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 41/161 (25%), Positives = 72/161 (44%)
Query: 239 IDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFAS 298
+DW+ G +++ ++ ++LW +S + G S + W E + A
Sbjct: 190 VDWSS---GNVLAVALDNSVYLWSASSGDILQLLQMEQPGDYVS--SVAWIK-EGNYLAV 243
Query: 299 CSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLK 358
+ + +WD + K L + +H+A V + WN S +L+SGS G HD+R+
Sbjct: 244 GTSSAEVQLWDVQQQKR-LRNMTSHSARVGSLCWN---SYILSSGSRSGHIHHHDVRV-- 297
Query: 359 GGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
+ VA H V + W+P +G LA DN + +W
Sbjct: 298 -AEHHVATLSGHSQEVCGLRWAP-DGRHLASGGNDNLVNVW 336
Score = 46 (21.3 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 12/42 (28%), Positives = 24/42 (57%)
Query: 174 RIRAMSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGH 215
R+ ++ N +I +S + +GH+ D R + +A T++GH
Sbjct: 270 RVGSLCWNSYILSSGSRSGHIHHHDVRVAEHHVA---TLSGH 308
Score = 37 (18.1 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 10/40 (25%), Positives = 20/40 (50%)
Query: 160 ILQLRKVAHQG-CVNRIRAMSQNPHICASWADTGHVQVWD 198
ILQL ++ G V+ + + + ++ + VQ+WD
Sbjct: 216 ILQLLQMEQPGDYVSSVAWIKEGNYLAVG-TSSAEVQLWD 254
>UNIPROTKB|F1MRW5 [details] [associations]
symbol:CDC20 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090129 "positive regulation of synapse maturation"
evidence=IEA] [GO:0051488 "activation of anaphase-promoting complex
activity" evidence=IEA] [GO:0040020 "regulation of meiosis"
evidence=IEA] [GO:0031915 "positive regulation of synaptic
plasticity" evidence=IEA] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0005680
"anaphase-promoting complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005680 GO:GO:0031145
GO:GO:0090129 GO:GO:0031915 GO:GO:0040020 GO:GO:0051488 OMA:RTPGKSN
GeneTree:ENSGT00580000081599 EMBL:DAAA02009047 IPI:IPI00715664
UniGene:Bt.639 ProteinModelPortal:F1MRW5 Ensembl:ENSBTAT00000012945
Uniprot:F1MRW5
Length = 499
Score = 145 (56.1 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 51/174 (29%), Positives = 86/174 (49%)
Query: 231 GHKDEGYAIDWNPVAPGR-LVSGDCNSCIHLWEPA-SDATWNVDPNPFIGHAASVEDLQW 288
GH E + W P GR L SG ++ +++W A + W V F H +V+ + W
Sbjct: 307 GHSQEVCGLRWAP--DGRHLASGGNDNLVNVWPSAPGEGGW-VPLQTFTQHQGAVKAVAW 363
Query: 289 SPTESDVFASC--SVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDD 346
P +S+V A+ + D +I IW+ G + L + AH+ +++ W+ L+ SG
Sbjct: 364 CPWQSNVLATGGGTSDRHIRIWNVCSG-ACLSAVDAHSQVCSIL-WSPHYKELI-SGHG- 419
Query: 347 GTFSIHDLRLLKGGDSV-VAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
F+ + L + K VA + H V S+ SP +G+T+A ++AD L +W
Sbjct: 420 --FAQNQLVIWKYPTMAKVAELKGHTARVLSLTMSP-DGATVASAAADETLRLW 470
Score = 132 (51.5 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 40/165 (24%), Positives = 74/165 (44%)
Query: 239 IDWNPVAPGRLVSGDCNSCIHLWEPASDATWNV----DPNPFIGHAASVEDLQWSPTESD 294
+DW+ G +++ ++ ++LW ++ + P +I A ++ E +
Sbjct: 190 VDWSS---GNVLAVALDNSVYLWSASTGDILQLLQMEQPGDYISSVAWIK-------EGN 239
Query: 295 VFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDL 354
A + + +WD + K L + +H+A V + WN S +L+SGS G HD+
Sbjct: 240 YLAVGTSSAEVQLWDVQQQKR-LRNMTSHSARVGSLCWN---SYILSSGSRSGHIHHHDV 295
Query: 355 RLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
R+ + VA H V + W+P +G LA DN + +W
Sbjct: 296 RV---AEHHVATLSGHSQEVCGLRWAP-DGRHLASGGNDNLVNVW 336
Score = 46 (21.3 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 12/42 (28%), Positives = 24/42 (57%)
Query: 174 RIRAMSQNPHICASWADTGHVQVWDFRSHLNALAESETVAGH 215
R+ ++ N +I +S + +GH+ D R + +A T++GH
Sbjct: 270 RVGSLCWNSYILSSGSRSGHIHHHDVRVAEHHVA---TLSGH 308
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 148 (57.2 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 48/175 (27%), Positives = 79/175 (45%)
Query: 231 GHKDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSP 290
GH + A ++PV+ +VSG +S +W D + GH + V + +SP
Sbjct: 146 GHGEAILATSFSPVSSSTMVSGSGDSTARIW----DCDTGTPLHTLKGHTSWVLAVSYSP 201
Query: 291 TESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWN--RLASC---LLASGSD 345
+ + A+ S+D + IWD + G++ K H + ++W L LAS S
Sbjct: 202 NGA-MIATGSMDNTVRIWDAKKGQALGAPLKGHVKWITSLAWEPYHLQQSGHPRLASASK 260
Query: 346 DGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWD 400
D T I D+ + K D V++ HK VT + W G + SS D + +W+
Sbjct: 261 DSTVRIWDV-ISKRADIVLSG---HKGSVTCVRWGG-TGK-IYTSSHDRTIKVWN 309
Score = 138 (53.6 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 40/129 (31%), Positives = 63/129 (48%)
Query: 278 GHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLAS 337
GH ++ +SP S S S D IWD G + L + K H + V +S++ +
Sbjct: 146 GHGEAILATSFSPVSSSTMVSGSGDSTARIWDCDTG-TPLHTLKGHTSWVLAVSYSPNGA 204
Query: 338 CLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHE----GST-LAVSSA 392
++A+GS D T I D K G ++ A + H +TS+ W P+ G LA +S
Sbjct: 205 -MIATGSMDNTVRIWDA---KKGQALGAPLKGHVKWITSLAWEPYHLQQSGHPRLASASK 260
Query: 393 DNQLTIWDL 401
D+ + IWD+
Sbjct: 261 DSTVRIWDV 269
Score = 135 (52.6 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 40/152 (26%), Positives = 71/152 (46%)
Query: 248 RLVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNIAI 307
+LVS + ++LW+P S + +GH V + +SP + + AS D ++ +
Sbjct: 376 KLVSASDDFTMYLWDPESSSK---PVARLLGHQKEVNHVTFSPDMAYI-ASAGFDNHVKL 431
Query: 308 WDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHF 367
W+ R GK + + + H V ++ S LL S S D T + ++R K + + H
Sbjct: 432 WNGRDGKF-ITTLRGHVGAVYQCCFSA-DSRLLVSSSKDTTLKVWNVRTGKLSEDLPGH- 488
Query: 368 EYHKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
K V +++WSP +G + D + IW
Sbjct: 489 ---KDEVFAVDWSP-DGQKVGSGGKDKAIRIW 516
>RGD|620759 [details] [associations]
symbol:Gnb5 "guanine nucleotide binding protein (G protein), beta
5" species:10116 "Rattus norvegicus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IC;ISO;TAS] [GO:0032794 "GTPase activating protein
binding" evidence=IPI] [GO:0043234 "protein complex" evidence=IDA]
[GO:0044297 "cell body" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:620759
GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0004871 GO:GO:0044297 PRINTS:PR00319 GO:GO:0005834
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539
CTD:10681 EMBL:AF001953 EMBL:AY552803 EMBL:BC089221 EMBL:AF022086
IPI:IPI00212659 RefSeq:NP_113958.1 UniGene:Rn.23042
ProteinModelPortal:P62882 SMR:P62882 PhosphoSite:P62882
PRIDE:P62882 GeneID:83579 KEGG:rno:83579 UCSC:RGD:620759
NextBio:616103 Genevestigator:P62882 Uniprot:P62882
Length = 353
Score = 145 (56.1 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 46/157 (29%), Positives = 73/157 (46%)
Query: 255 NSCIHLWEPASDAT---WNVDPNP----FIGHAASVEDLQWSPTES-DVFASCSVDGNIA 306
NS + + + D T W+V+ F GH A V L +P+E+ + F S D
Sbjct: 163 NSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAM 222
Query: 307 IWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAH 366
+WD R G+ + +F+ H +DVN + + ASGSDD T ++DLR D VA
Sbjct: 223 VWDMRSGQ-CVQAFETHESDVNSVRYYPSGDAF-ASGSDDATCRLYDLR----ADREVAI 276
Query: 367 FEYHK--HPVTSIEWSPHEGSTLAVSSADNQLTIWDL 401
+ +S+++S G L D + +WD+
Sbjct: 277 YSKESIIFGASSVDFSL-SGRLLFAGYNDYTINVWDV 312
>UNIPROTKB|I3LLQ2 [details] [associations]
symbol:GNB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
PRINTS:PR00319 GeneTree:ENSGT00550000074331 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:CU468047 EMBL:CU062444
Ensembl:ENSSSCT00000024996 Uniprot:I3LLQ2
Length = 354
Score = 145 (56.1 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 46/176 (26%), Positives = 78/176 (44%)
Query: 233 KDEGYAIDWNPVAPGRLVSGDCNSCIHLWEPASDATWNVDPNP----FIGHAASVEDLQW 288
K + A+ N ++ + D + + A W+V+ F GH A V L
Sbjct: 145 KKKSVAMHTNYLSACSFTNSDMQQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDL 204
Query: 289 SPTES-DVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDG 347
+P+E+ + F S D +WD R G+ + +F+ H +D+N + + ASGSDD
Sbjct: 205 APSETGNTFVSGGCDKKAMVWDMRSGQ-CIQAFETHESDINSVRYYPSGDAF-ASGSDDA 262
Query: 348 TFSIHDLRLLKGGDSVVAHFEYHK--HPVTSIEWSPHEGSTLAVSSADNQLTIWDL 401
T ++DLR D VA + +S+++S G L D + +WD+
Sbjct: 263 TCRLYDLR----ADREVAIYSKESIIFGASSVDFSL-SGRLLFAGYNDYTINVWDV 313
>TAIR|locus:2060560 [details] [associations]
symbol:LIS "AT2G41500" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS;RCA] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0007267
"cell-cell signaling" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
"histone methylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007267 GO:GO:0005681
EMBL:AC002510 GO:GO:0000398 GO:GO:0001709 EMBL:AC004625
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 EMBL:BT008700 EMBL:BT020589 EMBL:AK229530
IPI:IPI00545392 PIR:T00806 RefSeq:NP_181681.1 UniGene:At.12395
UniGene:At.42825 ProteinModelPortal:O22212 SMR:O22212 STRING:O22212
PaxDb:O22212 PRIDE:O22212 EnsemblPlants:AT2G41500.1 GeneID:818748
KEGG:ath:AT2G41500 GeneFarm:4669 TAIR:At2g41500
HOGENOM:HOG000157615 InParanoid:O22212 KO:K12662 OMA:CIATVSH
PhylomeDB:O22212 ProtClustDB:CLSN2683778 Genevestigator:O22212
GermOnline:AT2G41500 GO:GO:0009560 Uniprot:O22212
Length = 554
Score = 148 (57.2 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 53/182 (29%), Positives = 86/182 (47%)
Query: 226 LVKFGGHKDEGYAIDWNPVAPGR-LVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVE 284
L F GH D + ++P G+ L + + LW+ + A + GH+ SV
Sbjct: 332 LQTFEGHLDRLARVAFHP--SGKYLGTTSYDKTWRLWDINTGAELLLQE----GHSRSVY 385
Query: 285 DLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASCLLASGS 344
+ + + + ASC +D +WD R G+S L+ F+ H V ++++ LASG
Sbjct: 386 GIAFQQ-DGALAASCGLDSLARVWDLRTGRSILV-FQGHIKPVFSVNFSP-NGYHLASGG 442
Query: 345 DDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIW---DL 401
+D I DLR+ K + AH V+ +++ P EG LA +S D ++ IW D
Sbjct: 443 EDNQCRIWDLRMRKSLYIIPAHANL----VSQVKYEPQEGYFLATASYDMKVNIWSGRDF 498
Query: 402 SL 403
SL
Sbjct: 499 SL 500
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 145 (56.1 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 52/185 (28%), Positives = 81/185 (43%)
Query: 223 QSPLVKFGGHKDEGYAIDWNPVAPGRLV-SGDCNSCIHLWEPASDATWNVDPNPFIGHAA 281
QS +F GHKD ++++P G L+ SG + + +W P V F H A
Sbjct: 82 QSRAYRFTGHKDAVTCVNFSP--SGHLLASGSRDKTVRIWVPNIKGESTV----FRAHTA 135
Query: 282 SVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASC--- 338
+V + + ++ F + S D I +W T K L S H I+W R A
Sbjct: 136 TVRSVHFC-SDGQSFVTASDDKTIKVWSTHRQKF-LFSLSQH------INWVRCAKFSPD 187
Query: 339 --LLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQL 396
L+ S SDD T + D K V + H VT +++ P G+ +A + DN +
Sbjct: 188 GRLIVSASDDKTVKLWD----KTSRECVHSYCEHGGFVTYVDFHP-SGTCVAAAGMDNTV 242
Query: 397 TIWDL 401
+WD+
Sbjct: 243 KVWDV 247
Score = 133 (51.9 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 64/257 (24%), Positives = 109/257 (42%)
Query: 164 RKVAHQGCVNRIRAMSQNPHICASWADTGHVQVWD---------FRSHLNALAESETVAG 214
R H+ V + S + H+ AS + V++W FR+H A S
Sbjct: 87 RFTGHKDAVTCVN-FSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAH-TATVRSVHFCS 144
Query: 215 HGAPQVL-NQSPLVK-FGGHKDE-----GYAIDWNPVA---P-GRL-VSGDCNSCIHLWE 262
G V + +K + H+ + I+W A P GRL VS + + LW
Sbjct: 145 DGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLW- 203
Query: 263 PASDATWNVDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKA 322
D T + + H V + + P+ + V A+ +D + +WD R + L ++
Sbjct: 204 ---DKTSRECVHSYCEHGGFVTYVDFHPSGTCV-AAAGMDNTVKVWDVRTHR-LLQHYQL 258
Query: 323 HNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPH 382
H+A VN +S++ + L+ + SD T I DL ++G H H+ P T++ +S
Sbjct: 259 HSAAVNALSFHPSGNYLVTASSDS-TLKILDL--MEGRLLYTLHG--HQGPATTVAFS-R 312
Query: 383 EGSTLAVSSADNQLTIW 399
G A +D Q+ +W
Sbjct: 313 TGEYFASGGSDEQVMVW 329
Score = 131 (51.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 48/175 (27%), Positives = 81/175 (46%)
Query: 229 FGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLW--EPASDATWNVDPNPFIGHAASVEDL 286
F GH+D +D++ +L SG +SC+ +W +P S A F GH +V +
Sbjct: 46 FKGHRDAVTCVDFS-FNMKQLASGSMDSCLMVWHMKPQSRAY------RFTGHKDAVTCV 98
Query: 287 QWSPTESDVFASCSVDGNIAIWDTRV-GKSALMSFKAHNADVNVISWNRLASCLLASGSD 345
+SP+ + AS S D + IW + G+S + F+AH A V + + + + SD
Sbjct: 99 NFSPS-GHLLASGSRDKTVRIWVPNIKGESTV--FRAHTATVRSVHFCSDGQSFVTA-SD 154
Query: 346 DGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWD 400
D T + K S+ H + V ++SP +G + +S D + +WD
Sbjct: 155 DKTIKVWSTHRQKFLFSLSQHINW----VRCAKFSP-DGRLIVSASDDKTVKLWD 204
Score = 120 (47.3 bits), Expect = 0.00024, P = 0.00024
Identities = 31/123 (25%), Positives = 62/123 (50%)
Query: 279 HAASVEDLQWSPTESDVFASCSVDGNIAIWDTRVGKSALMSFKAHNADVNVISWNRLASC 338
H V ++SP + + S S D + +WD + + + S+ H V + ++ +C
Sbjct: 175 HINWVRCAKFSP-DGRLIVSASDDKTVKLWD-KTSRECVHSYCEHGGFVTYVDFHPSGTC 232
Query: 339 LLASGSDDGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTI 398
+ A+G D+ T + D+R + ++ H++ H V ++ + P G+ L +S+D+ L I
Sbjct: 233 VAAAGMDN-TVKVWDVRTHR----LLQHYQLHSAAVNALSFHP-SGNYLVTASSDSTLKI 286
Query: 399 WDL 401
DL
Sbjct: 287 LDL 289
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 146 (56.5 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 48/177 (27%), Positives = 85/177 (48%)
Query: 229 FGGHKDEGYAIDWNPVAPGRLVSGDCNSCIHLW--EPASDATWNVDPNPFIGHAASVEDL 286
F GH+D ++D++P ++ SG ++ + +W +P S A F GH +V +
Sbjct: 14 FKGHRDAITSLDFSPSGK-QIASGSVDASVMVWNMKPQSRAY------RFTGHKDAVTCV 66
Query: 287 QWSPTESDVFASCSVDGNIAIWDTRV-GKSALMSFKAHNADVNVISWNRLASCLLASGSD 345
Q+SP+ + + AS S D + +W V G+S L F+AH V + ++ LL + SD
Sbjct: 67 QFSPS-AHLLASSSRDKTVRLWVPSVKGESVL--FRAHTGSVRSVCFSADGQSLLTA-SD 122
Query: 346 DGTFSIHDLRLLKGGDSVVAHFEYHKHPVTSIEWSPHEGSTLAVSSADNQLTIWDLS 402
D + + + K ++ H + V +SP +G + S D + +WD S
Sbjct: 123 DQSIKLWSVHRQK----IICTLREHNNWVRCARFSP-DGQLMVSVSDDRTVKLWDAS 174
Score = 119 (46.9 bits), Expect = 0.00038, P = 0.00038
Identities = 40/151 (26%), Positives = 73/151 (48%)
Query: 249 LVSGDCNSCIHLWEPASDATWNVDPNPFIGHAASVEDLQWSPTESDVFASCSVDGNIAIW 308
+VS + + LW+ +S + P G+++ V+ + P+ S A+ S D + +W
Sbjct: 159 MVSVSDDRTVKLWDASSRQLIHTFCEPG-GYSSYVD---FHPS-STCIATASSDNTVRVW 213
Query: 309 DTRVGKSALMSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVVAHFE 368
D R + L ++ H+A VN +S++ + LL + SD T I DL L+G H
Sbjct: 214 DIRT-HTLLQHYQVHSAAVNALSFHPSGNHLLTASSDS-TLKILDL--LEGRLLYTLHG- 268
Query: 369 YHKHPVTSIEWSPHEGSTLAVSSADNQLTIW 399
H+ + + +S G A + +D Q+ +W
Sbjct: 269 -HQGSASCVSFS-RSGDQFASAGSDQQVMVW 297
WARNING: HSPs involving 485 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.132 0.422 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 479 436 0.00088 118 3 11 22 0.41 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 735
No. of states in DFA: 631 (67 KB)
Total size of DFA: 328 KB (2163 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 34.46u 0.14s 34.60t Elapsed: 00:00:01
Total cpu time: 34.54u 0.14s 34.68t Elapsed: 00:00:01
Start: Fri May 10 19:36:58 2013 End: Fri May 10 19:36:59 2013
WARNINGS ISSUED: 2