Query 039311
Match_columns 909
No_of_seqs 605 out of 5263
Neff 9.0
Searched_HMMs 13730
Date Mon Mar 25 14:12:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039311.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/039311hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2a5yb3 c.37.1.20 (B:109-385) 99.9 2.1E-27 1.5E-31 250.7 15.9 151 40-197 125-276 (277)
2 d2omza2 c.10.2.1 (A:33-416) In 99.8 6.2E-20 4.5E-24 203.4 26.1 318 310-658 42-382 (384)
3 d2omza2 c.10.2.1 (A:33-416) In 99.8 1.5E-19 1.1E-23 200.3 27.9 302 339-666 43-367 (384)
4 d1ogqa_ c.10.2.8 (A:) Polygala 99.8 1.5E-20 1.1E-24 202.7 13.6 249 363-645 51-308 (313)
5 d1xkua_ c.10.2.7 (A:) Decorin 99.8 1.3E-18 9.8E-23 186.4 26.3 261 341-639 11-283 (305)
6 d1ogqa_ c.10.2.8 (A:) Polygala 99.8 1.4E-18 1E-22 187.0 17.5 249 385-666 50-308 (313)
7 d1jl5a_ c.10.2.6 (A:) Leucine 99.8 7.5E-17 5.4E-21 175.7 28.4 301 313-657 39-352 (353)
8 d1xkua_ c.10.2.7 (A:) Decorin 99.7 3E-16 2.2E-20 167.8 25.4 241 339-618 30-285 (305)
9 d1jl5a_ c.10.2.6 (A:) Leucine 99.7 1E-15 7.6E-20 166.5 26.2 292 340-669 38-343 (353)
10 d1p9ag_ c.10.2.7 (G:) von Will 99.7 2.1E-15 1.5E-19 157.6 21.0 174 409-639 32-206 (266)
11 d1p9ag_ c.10.2.7 (G:) von Will 99.6 1.3E-15 9.7E-20 159.2 18.7 192 341-565 11-205 (266)
12 d1ozna_ c.10.2.7 (A:) Reticulo 99.6 3.8E-16 2.8E-20 165.1 14.3 216 345-618 16-238 (284)
13 d1ozna_ c.10.2.7 (A:) Reticulo 99.6 1.2E-14 9.1E-19 153.2 21.5 218 366-639 15-236 (284)
14 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.5 1E-13 7.3E-18 142.4 15.7 186 343-530 11-208 (242)
15 d1h6ua2 c.10.2.1 (A:36-262) In 99.5 3E-13 2.2E-17 137.3 17.3 183 340-530 41-224 (227)
16 d1h6ua2 c.10.2.1 (A:36-262) In 99.5 1.2E-13 8.5E-18 140.4 14.2 200 347-590 26-225 (227)
17 d2omxa2 c.10.2.1 (A:37-235) In 99.4 4.4E-13 3.2E-17 133.0 14.9 160 340-528 40-199 (199)
18 d1h6ta2 c.10.2.1 (A:31-240) In 99.4 3.8E-13 2.8E-17 134.7 14.0 162 341-531 47-208 (210)
19 d1h6ta2 c.10.2.1 (A:31-240) In 99.4 5.5E-13 4E-17 133.5 14.8 124 495-637 86-209 (210)
20 d2astb2 c.10.1.3 (B:2136-2419) 99.4 7.3E-14 5.3E-18 147.0 8.1 85 383-467 44-133 (284)
21 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.4 1.6E-12 1.2E-16 133.1 17.4 99 365-465 11-113 (242)
22 d2omxa2 c.10.2.1 (A:37-235) In 99.4 1.5E-12 1.1E-16 129.1 15.5 54 578-633 146-199 (199)
23 d2astb2 c.10.1.3 (B:2136-2419) 99.3 2E-13 1.5E-17 143.6 5.4 129 365-513 3-135 (284)
24 d1dcea3 c.10.2.2 (A:444-567) R 99.1 5.3E-11 3.9E-15 107.6 9.3 100 343-443 1-101 (124)
25 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.1 7.1E-11 5.2E-15 116.0 10.9 124 343-468 11-139 (192)
26 d1a9na_ c.10.2.4 (A:) Spliceso 99.1 3.2E-11 2.3E-15 114.7 6.4 81 360-442 16-97 (162)
27 d1a9na_ c.10.2.4 (A:) Spliceso 99.1 8.1E-11 5.9E-15 111.9 7.8 121 339-462 17-146 (162)
28 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.0 1.9E-11 1.4E-15 137.0 1.7 58 581-638 339-407 (460)
29 d1dcea3 c.10.2.2 (A:444-567) R 99.0 6E-10 4.4E-14 100.5 11.0 116 479-633 1-122 (124)
30 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.0 2E-10 1.4E-14 112.7 8.2 105 339-443 28-137 (192)
31 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.0 1.7E-11 1.2E-15 137.4 -2.1 329 307-640 22-438 (460)
32 d1m9la_ c.10.3.1 (A:) Outer ar 98.8 4.1E-11 3E-15 118.1 -4.4 114 373-510 36-151 (198)
33 d1m9la_ c.10.3.1 (A:) Outer ar 98.8 6.3E-11 4.6E-15 116.7 -3.8 85 582-667 93-181 (198)
34 d2ca6a1 c.10.1.2 (A:2-345) Rna 98.8 7.5E-10 5.5E-14 119.3 2.1 89 551-639 211-313 (344)
35 d2ca6a1 c.10.1.2 (A:2-345) Rna 98.6 2.5E-09 1.8E-13 115.1 1.8 112 547-659 178-312 (344)
36 d2ifga3 c.10.2.7 (A:36-191) Hi 98.6 5.8E-08 4.2E-12 91.0 9.3 98 540-639 16-114 (156)
37 d2ifga3 c.10.2.7 (A:36-191) Hi 98.5 2.1E-07 1.5E-11 87.0 10.1 101 365-466 11-114 (156)
38 d1koha1 c.10.2.3 (A:201-362) m 96.8 0.00021 1.5E-08 66.3 2.6 118 386-529 23-152 (162)
39 d1koha1 c.10.2.3 (A:201-362) m 96.6 0.00035 2.6E-08 64.8 2.2 60 581-640 64-127 (162)
40 d1pgva_ c.10.1.1 (A:) Tropomod 95.5 0.0024 1.8E-07 59.1 2.6 35 582-616 72-111 (167)
41 d1pgva_ c.10.1.1 (A:) Tropomod 94.8 0.0073 5.3E-07 55.7 3.7 83 554-638 14-110 (167)
42 d1io0a_ c.10.1.1 (A:) Tropomod 92.4 0.038 2.8E-06 50.5 3.8 84 553-638 15-112 (166)
43 d2fnaa2 c.37.1.20 (A:1-283) Ar 91.9 0.1 7.6E-06 51.4 6.9 103 47-154 133-253 (283)
44 d1io0a_ c.10.1.1 (A:) Tropomod 91.3 0.02 1.5E-06 52.4 0.5 58 581-638 73-142 (166)
45 d1a5ta2 c.37.1.20 (A:1-207) de 85.9 1.7 0.00012 40.4 10.2 92 49-147 107-202 (207)
46 d1njfa_ c.37.1.20 (A:) delta p 76.8 4 0.00029 38.6 9.4 93 50-144 115-211 (239)
47 d1sxje2 c.37.1.20 (E:4-255) Re 71.9 3.1 0.00022 39.6 7.1 95 49-144 130-228 (252)
48 d1l8qa2 c.37.1.20 (A:77-289) C 69.4 4.8 0.00035 37.3 7.6 67 51-118 98-178 (213)
49 d1sxjc2 c.37.1.20 (C:12-238) R 60.8 10 0.00074 35.0 8.2 93 49-143 98-194 (227)
50 d1sxjd2 c.37.1.20 (D:26-262) R 57.8 13 0.00093 34.4 8.4 99 43-143 101-203 (237)
51 d1ixza_ c.37.1.20 (A:) AAA dom 57.2 17 0.0012 34.2 9.1 91 48-142 99-213 (247)
52 d1sxjb2 c.37.1.20 (B:7-230) Re 51.9 17 0.0012 33.4 8.1 94 50-145 101-198 (224)
53 d1e32a2 c.37.1.20 (A:201-458) 46.3 48 0.0035 30.9 10.6 91 48-142 95-206 (258)
54 d1lv7a_ c.37.1.20 (A:) AAA dom 44.1 31 0.0023 32.4 8.7 92 48-143 102-217 (256)
55 d1d2na_ c.37.1.20 (A:) Hexamer 38.4 33 0.0024 32.0 7.7 71 47-117 97-187 (246)
56 d1iqpa2 c.37.1.20 (A:2-232) Re 33.2 39 0.0028 30.7 7.3 93 49-143 108-204 (231)
57 d1r7ra3 c.37.1.20 (A:471-735) 25.8 56 0.0041 30.6 7.0 92 48-143 98-213 (265)
58 d2b4aa1 c.23.1.1 (A:2-119) Hyp 21.0 88 0.0064 24.9 6.4 95 20-115 16-113 (118)
59 g1f2t.1 c.37.1.12 (A:,B:) Rad5 20.8 32 0.0023 32.3 4.1 59 44-104 219-281 (292)
No 1
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]}
Probab=99.94 E-value=2.1e-27 Score=250.75 Aligned_cols=151 Identities=18% Similarity=0.197 Sum_probs=136.8
Q ss_pred hHHHHHhhCCCeEEEEEeCCCCHHHHHHHhhccCCCCCCCEEEEEeCCchhhhhcCCC-cEEECCCCCHHHHHHHHHHhh
Q 039311 40 LNFRSKRLSRKKVLIVFDDVSTSEQMEFLIGNQGWLMQGSRLIITARDKQVLKNCGVD-TIYEVKELFDDDARMLFSRYA 118 (909)
Q Consensus 40 ~~~i~~~L~~kr~LlVLDDv~~~~~~~~l~~~~~~~~~gSrIivTTR~~~v~~~~~~~-~~y~l~~L~~~es~~LF~~~a 118 (909)
...+.+.|.+||+|+||||||+.++|+.+.. .|||||||||+++|+..+..+ .+|+|++|+.+|||+||+++|
T Consensus 125 ~~~~~~~L~~kr~LlVLDDv~~~~~~~~~~~------~~srilvTTR~~~v~~~~~~~~~~~~l~~L~~~ea~~Lf~~~~ 198 (277)
T d2a5yb3 125 RMICNALIDRPNTLFVFDDVVQEETIRWAQE------LRLRCLVTTRDVEISNAASQTCEFIEVTSLEIDECYDFLEAYG 198 (277)
T ss_dssp HHHHHHHTTSTTEEEEEEEECCHHHHHHHHH------TTCEEEEEESBGGGGGGCCSCEEEEECCCCCHHHHHHHHHHTS
T ss_pred HHHHHHHhccCCeeEecchhhHHhhhhhhcc------cCceEEEEeehHHHHHhcCCCCceEECCCCCHHHHHHHHHHHh
Confidence 4467888999999999999999999987653 589999999999999988665 689999999999999999999
Q ss_pred cCCCCCCchhHHHHHHHHHHhCCCchHHHHHhHhhcCCCHHHHHHHHHHHhcCCCcchhhhhhhcccCCChhhhhhhee
Q 039311 119 FGKNYPNVGYMELSNKIIKYAKGVPLAIKVLGRFLCGRRIKDWESTIKKIKRIPHVDIQKVLKVSFDGLDDEEQNLFLD 197 (909)
Q Consensus 119 f~~~~~~~~~~~l~~~iv~~c~GlPLal~~lg~~L~~~~~~~W~~~l~~L~~~~~~~i~~~L~~sy~~L~~~~k~cfl~ 197 (909)
|....+ +...+++++||++|+|+||||+++|+.|++++.++|.+..++|++....++..++++||++||+++|.||-+
T Consensus 199 ~~~~~~-~~~~~~~~~iv~~c~GlPLAl~~ig~~l~~k~~~~~~~~~~~L~~~~~~~v~~il~~sY~~L~~~lk~c~~~ 276 (277)
T d2a5yb3 199 MPMPVG-EKEEDVLNKTIELSSGNPATLMMFFKSCEPKTFEKMAQLNNKLESRGLVGVECITPYSYKSLAMALQRCVEV 276 (277)
T ss_dssp CCCC---CHHHHHHHHHHHHHTTCHHHHHHHHTTCCSSSHHHHHHHHHHHHHHCSSTTCCCSSSSSSSHHHHHHHHHHT
T ss_pred CCccCc-hhhHHHHHHHHHHhCCCHHHHHHHHHHhccCCHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccHHHHHHHHh
Confidence 976544 457899999999999999999999999999999999999999988888899999999999999999999954
No 2
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.84 E-value=6.2e-20 Score=203.43 Aligned_cols=318 Identities=20% Similarity=0.277 Sum_probs=207.1
Q ss_pred CCCCCcEEEEecCCCCcCcceeecCCCCC-CCCccEEEeeCCCCCccCCCCCCCCeeEEEcCCCCccccccccccCCCCC
Q 039311 310 NMHKLRFFKFYSSHYGENVNKVHNFRGLE-STELRYLQWHGCPLKSLSSKIPPENLVSLEMPHSSIKQLWKGVQRLVNLK 388 (909)
Q Consensus 310 ~~~~Lr~L~l~~~~~~~~~~~~~~~~~l~-~~~Lr~L~l~~~~l~~lp~~~~~~~L~~L~L~~~~i~~lp~~~~~L~~L~ 388 (909)
.+.+|+.|++.++.+. ..++++ +++|++|++++|.++.+|..-.+.+|++|++++|.+..++. +..+++|+
T Consensus 42 ~l~~l~~L~l~~~~I~-------~l~gl~~L~nL~~L~Ls~N~l~~l~~l~~L~~L~~L~L~~n~i~~i~~-l~~l~~L~ 113 (384)
T d2omza2 42 DLDQVTTLQADRLGIK-------SIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITP-LANLTNLT 113 (384)
T ss_dssp HHTTCCEEECCSSCCC-------CCTTGGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCGG-GTTCTTCC
T ss_pred HhCCCCEEECCCCCCC-------CccccccCCCCCEEeCcCCcCCCCccccCCcccccccccccccccccc-cccccccc
Confidence 4567888888766432 234455 77888888888888888765577888888888888887764 77888888
Q ss_pred EEecCCCcCCCcCCCCCccccccccccccccccce-------------------ecccccCCCcccEeccccccCccccC
Q 039311 389 HINLSHSEHLTKIPDLSLATNLESLNFQGCTCLLE-------------------THSSIQYLNKLVVLNLKHCRSLTSLS 449 (909)
Q Consensus 389 ~L~Ls~~~~l~~~p~l~~l~~L~~L~L~~c~~l~~-------------------~p~~i~~L~~L~~L~L~~c~~l~~lp 449 (909)
.|+++++.... ++.......+..+....+..... ....+.............+. .....
T Consensus 114 ~L~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 191 (384)
T d2omza2 114 GLTLFNNQITD-IDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNK-VSDIS 191 (384)
T ss_dssp EEECCSSCCCC-CGGGTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSC-CCCCG
T ss_pred ccccccccccc-cccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccc-ccccc
Confidence 88888776443 22223333333333332211100 00111122222222222211 11222
Q ss_pred ccccCCcCcEEEccCCCCCcccC-ccccCcceeeccccCccccCcccccCCCCCEEeccCCCCCCcCcccccCCCCCCee
Q 039311 450 TSIHLGSLKKLILSGCSNLMSFP-ELSCNIEELSLDGTAIQEFPSSIERLSSLILLNLGNCLRLEGLPSKICKLKSLERL 528 (909)
Q Consensus 450 ~~~~l~~L~~L~Ls~c~~l~~lp-~~~~~L~~L~L~~~~i~~lp~~i~~l~~L~~L~L~~c~~l~~lp~~l~~L~~L~~L 528 (909)
....+++++.+.+++|......| ....+|++|++++|.++.+| .+..+++|+.|++++|.. ..++. ++.+++|+.|
T Consensus 192 ~~~~l~~~~~l~l~~n~i~~~~~~~~~~~L~~L~l~~n~l~~~~-~l~~l~~L~~L~l~~n~l-~~~~~-~~~~~~L~~L 268 (384)
T d2omza2 192 VLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG-TLASLTNLTDLDLANNQI-SNLAP-LSGLTKLTEL 268 (384)
T ss_dssp GGGGCTTCSEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCCCG-GGGGCTTCSEEECCSSCC-CCCGG-GTTCTTCSEE
T ss_pred ccccccccceeeccCCccCCCCcccccCCCCEEECCCCCCCCcc-hhhcccccchhccccCcc-CCCCc-ccccccCCEe
Confidence 22357888999998875444333 23467889999999888875 578889999999999864 34443 7788888888
Q ss_pred ecccccccccccCcceeecCccccccCCCCeeecCccccccccccccCccCCCCCCCEEecCCCCCCCcccccCCCCCCc
Q 039311 529 NLAEALKELKAEGIAIREVPSSIACLKNLGRLSFESFMCHEQMGLLLPISFGLTSLTYLRLTDCGIIELPECLGQLSSRS 608 (909)
Q Consensus 529 ~l~~~l~~L~l~~~~~~~lp~~i~~l~~L~~L~l~~~~~~~~~~~~~~~~~~l~~L~~L~Ls~~~l~~lp~~l~~l~~L~ 608 (909)
++. ++.+..++. +..++.++.+.+..+... .++.+..+++++.|++++|++.+++. +..+++|+
T Consensus 269 ~l~---------~~~l~~~~~-~~~~~~l~~l~~~~n~l~-----~~~~~~~~~~l~~L~ls~n~l~~l~~-l~~l~~L~ 332 (384)
T d2omza2 269 KLG---------ANQISNISP-LAGLTALTNLELNENQLE-----DISPISNLKNLTYLTLYFNNISDISP-VSSLTKLQ 332 (384)
T ss_dssp ECC---------SSCCCCCGG-GTTCTTCSEEECCSSCCS-----CCGGGGGCTTCSEEECCSSCCSCCGG-GGGCTTCC
T ss_pred ecc---------CcccCCCCc-cccccccccccccccccc-----cccccchhcccCeEECCCCCCCCCcc-cccCCCCC
Confidence 773 344455543 667778888887763222 13345667888999999998888753 77888999
Q ss_pred EEECCCCCCeecchhhccCCCCCEEeecCCCCCcccCC--CCCCcCceeccc
Q 039311 609 ILLLEKNNFERIPESIIQLSHLFSLGISHCERLHSLPE--LPCDLSDIEAHC 658 (909)
Q Consensus 609 ~L~L~~n~l~~lp~~i~~l~~L~~L~L~~c~~L~~lp~--l~~sL~~L~i~~ 658 (909)
.|++++|+++.++ .+..+++|++|++++| .++.++. -.++|+.|++++
T Consensus 333 ~L~L~~n~l~~l~-~l~~l~~L~~L~l~~N-~l~~l~~l~~l~~L~~L~L~~ 382 (384)
T d2omza2 333 RLFFANNKVSDVS-SLANLTNINWLSAGHN-QISDLTPLANLTRITQLGLND 382 (384)
T ss_dssp EEECCSSCCCCCG-GGGGCTTCCEEECCSS-CCCBCGGGTTCTTCSEEECCC
T ss_pred EEECCCCCCCCCh-hHcCCCCCCEEECCCC-cCCCChhhccCCCCCEeeCCC
Confidence 9999999888877 5888899999999876 4666653 234566666654
No 3
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.84 E-value=1.5e-19 Score=200.35 Aligned_cols=302 Identities=20% Similarity=0.232 Sum_probs=218.8
Q ss_pred CCCccEEEeeCCCCCccCCCCCCCCeeEEEcCCCCccccccccccCCCCCEEecCCCcCCCcCCCCCccccccccccccc
Q 039311 339 STELRYLQWHGCPLKSLSSKIPPENLVSLEMPHSSIKQLWKGVQRLVNLKHINLSHSEHLTKIPDLSLATNLESLNFQGC 418 (909)
Q Consensus 339 ~~~Lr~L~l~~~~l~~lp~~~~~~~L~~L~L~~~~i~~lp~~~~~L~~L~~L~Ls~~~~l~~~p~l~~l~~L~~L~L~~c 418 (909)
+.+|+.|+++++.++++++.-.+++|++|++++|+|+.++. ++++++|++|++++|.+. .++.++.+++|+.|++.++
T Consensus 43 l~~l~~L~l~~~~I~~l~gl~~L~nL~~L~Ls~N~l~~l~~-l~~L~~L~~L~L~~n~i~-~i~~l~~l~~L~~L~~~~~ 120 (384)
T d2omza2 43 LDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITP-LKNLTKLVDILMNNNQIA-DITPLANLTNLTGLTLFNN 120 (384)
T ss_dssp HTTCCEEECCSSCCCCCTTGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCC-CCGGGTTCTTCCEEECCSS
T ss_pred hCCCCEEECCCCCCCCccccccCCCCCEEeCcCCcCCCCcc-ccCCcccccccccccccc-ccccccccccccccccccc
Confidence 56899999999999999755588999999999999999985 899999999999999854 5666899999999999887
Q ss_pred cccceecccccCCCcccEeccccccC--------------------ccccCccccCCcCcEEEccCCCCC-cccCccccC
Q 039311 419 TCLLETHSSIQYLNKLVVLNLKHCRS--------------------LTSLSTSIHLGSLKKLILSGCSNL-MSFPELSCN 477 (909)
Q Consensus 419 ~~l~~~p~~i~~L~~L~~L~L~~c~~--------------------l~~lp~~~~l~~L~~L~Ls~c~~l-~~lp~~~~~ 477 (909)
......+ ......+..+....+.. ...+................+... ........+
T Consensus 121 ~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 198 (384)
T d2omza2 121 QITDIDP--LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTN 198 (384)
T ss_dssp CCCCCGG--GTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCCGGGGGCTT
T ss_pred ccccccc--ccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccccccccccccccc
Confidence 6443222 22333333333322110 000000011223333333332221 122234567
Q ss_pred cceeeccccCccccCcccccCCCCCEEeccCCCCCCcCcccccCCCCCCeeecccccccccccCcceeecCccccccCCC
Q 039311 478 IEELSLDGTAIQEFPSSIERLSSLILLNLGNCLRLEGLPSKICKLKSLERLNLAEALKELKAEGIAIREVPSSIACLKNL 557 (909)
Q Consensus 478 L~~L~L~~~~i~~lp~~i~~l~~L~~L~L~~c~~l~~lp~~l~~L~~L~~L~l~~~l~~L~l~~~~~~~lp~~i~~l~~L 557 (909)
++.+.++++.+..++. ....++|+.|++++|.. ..++ .+..+++|+.|++ .++.+..++. ++.+++|
T Consensus 199 ~~~l~l~~n~i~~~~~-~~~~~~L~~L~l~~n~l-~~~~-~l~~l~~L~~L~l---------~~n~l~~~~~-~~~~~~L 265 (384)
T d2omza2 199 LESLIATNNQISDITP-LGILTNLDELSLNGNQL-KDIG-TLASLTNLTDLDL---------ANNQISNLAP-LSGLTKL 265 (384)
T ss_dssp CSEEECCSSCCCCCGG-GGGCTTCCEEECCSSCC-CCCG-GGGGCTTCSEEEC---------CSSCCCCCGG-GTTCTTC
T ss_pred cceeeccCCccCCCCc-ccccCCCCEEECCCCCC-CCcc-hhhcccccchhcc---------ccCccCCCCc-ccccccC
Confidence 8999999999998865 57789999999999854 4444 5778888888877 4455555554 7889999
Q ss_pred CeeecCccccccccccccCccCCCCCCCEEecCCCCCCCcccccCCCCCCcEEECCCCCCeecchhhccCCCCCEEeecC
Q 039311 558 GRLSFESFMCHEQMGLLLPISFGLTSLTYLRLTDCGIIELPECLGQLSSRSILLLEKNNFERIPESIIQLSHLFSLGISH 637 (909)
Q Consensus 558 ~~L~l~~~~~~~~~~~~~~~~~~l~~L~~L~Ls~~~l~~lp~~l~~l~~L~~L~L~~n~l~~lp~~i~~l~~L~~L~L~~ 637 (909)
+.|+++++... .++.+..++.++.+.++.|.+..++ .+..+++++.|++++|+++.++ .+..+++|++|++++
T Consensus 266 ~~L~l~~~~l~-----~~~~~~~~~~l~~l~~~~n~l~~~~-~~~~~~~l~~L~ls~n~l~~l~-~l~~l~~L~~L~L~~ 338 (384)
T d2omza2 266 TELKLGANQIS-----NISPLAGLTALTNLELNENQLEDIS-PISNLKNLTYLTLYFNNISDIS-PVSSLTKLQRLFFAN 338 (384)
T ss_dssp SEEECCSSCCC-----CCGGGTTCTTCSEEECCSSCCSCCG-GGGGCTTCSEEECCSSCCSCCG-GGGGCTTCCEEECCS
T ss_pred CEeeccCcccC-----CCCcccccccccccccccccccccc-ccchhcccCeEECCCCCCCCCc-ccccCCCCCEEECCC
Confidence 99999874433 2345677899999999999988764 4788999999999999999887 488999999999999
Q ss_pred CCCCcccCC--CCCCcCceecccCccccccc
Q 039311 638 CERLHSLPE--LPCDLSDIEAHCCSSLEALS 666 (909)
Q Consensus 638 c~~L~~lp~--l~~sL~~L~i~~C~~L~~l~ 666 (909)
| .++.++. -.++|+.|++.+| .++.++
T Consensus 339 n-~l~~l~~l~~l~~L~~L~l~~N-~l~~l~ 367 (384)
T d2omza2 339 N-KVSDVSSLANLTNINWLSAGHN-QISDLT 367 (384)
T ss_dssp S-CCCCCGGGGGCTTCCEEECCSS-CCCBCG
T ss_pred C-CCCCChhHcCCCCCCEEECCCC-cCCCCh
Confidence 8 5666654 2458999999877 566654
No 4
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.82 E-value=1.5e-20 Score=202.74 Aligned_cols=249 Identities=18% Similarity=0.167 Sum_probs=151.6
Q ss_pred CeeEEEcCCCCcc---ccccccccCCCCCEEecCC-CcCCCcCCC-CCccccccccccccccccceecccccCCCcccEe
Q 039311 363 NLVSLEMPHSSIK---QLWKGVQRLVNLKHINLSH-SEHLTKIPD-LSLATNLESLNFQGCTCLLETHSSIQYLNKLVVL 437 (909)
Q Consensus 363 ~L~~L~L~~~~i~---~lp~~~~~L~~L~~L~Ls~-~~~l~~~p~-l~~l~~L~~L~L~~c~~l~~~p~~i~~L~~L~~L 437 (909)
+++.|+|+++++. .+|.++++|++|++|+|++ |.+.+.+|. ++++++|++|++++|......+..+..+.+|+++
T Consensus 51 ~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l 130 (313)
T d1ogqa_ 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTL 130 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEE
T ss_pred EEEEEECCCCCCCCCCCCChHHhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhccc
Confidence 4555555555544 4667777777777777775 455556664 7777777777777776666666667777777777
Q ss_pred ccccccCccccCccc-cCCcCcEEEccCCCCCcccCccccCcceeeccccCccccCcccccCCCC-CEEeccCCCCCCcC
Q 039311 438 NLKHCRSLTSLSTSI-HLGSLKKLILSGCSNLMSFPELSCNIEELSLDGTAIQEFPSSIERLSSL-ILLNLGNCLRLEGL 515 (909)
Q Consensus 438 ~L~~c~~l~~lp~~~-~l~~L~~L~Ls~c~~l~~lp~~~~~L~~L~L~~~~i~~lp~~i~~l~~L-~~L~L~~c~~l~~l 515 (909)
++++|.....+|..+ +++.|+.+++++|...+.+| ..+..+..+ +.+.+++|...+..
T Consensus 131 ~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip--------------------~~~~~l~~l~~~l~~~~n~l~~~~ 190 (313)
T d1ogqa_ 131 DFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIP--------------------DSYGSFSKLFTSMTISRNRLTGKI 190 (313)
T ss_dssp ECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECC--------------------GGGGCCCTTCCEEECCSSEEEEEC
T ss_pred ccccccccccCchhhccCcccceeeccccccccccc--------------------cccccccccccccccccccccccc
Confidence 777766666666555 46677777766655444444 333333332 44444444443344
Q ss_pred cccccCCCCCCeeecccccccccccCcceeecCccccccCCCCeeecCccccccccccccCccCCCCCCCEEecCCCCCC
Q 039311 516 PSKICKLKSLERLNLAEALKELKAEGIAIREVPSSIACLKNLGRLSFESFMCHEQMGLLLPISFGLTSLTYLRLTDCGII 595 (909)
Q Consensus 516 p~~l~~L~~L~~L~l~~~l~~L~l~~~~~~~lp~~i~~l~~L~~L~l~~~~~~~~~~~~~~~~~~l~~L~~L~Ls~~~l~ 595 (909)
|..++.+..+ .+++.. ......+|..++.+++|+.+++.++ .+ ...++.+..+++|+.|+|++|++.
T Consensus 191 ~~~~~~l~~~-~l~l~~--------~~~~~~~~~~~~~~~~l~~l~~~~~---~l-~~~~~~~~~~~~L~~L~Ls~N~l~ 257 (313)
T d1ogqa_ 191 PPTFANLNLA-FVDLSR--------NMLEGDASVLFGSDKNTQKIHLAKN---SL-AFDLGKVGLSKNLNGLDLRNNRIY 257 (313)
T ss_dssp CGGGGGCCCS-EEECCS--------SEEEECCGGGCCTTSCCSEEECCSS---EE-CCBGGGCCCCTTCCEEECCSSCCE
T ss_pred cccccccccc-cccccc--------ccccccccccccccccccccccccc---cc-cccccccccccccccccCccCeec
Confidence 4433333222 232211 1112233444455555555555541 11 223445666778888888888888
Q ss_pred -CcccccCCCCCCcEEECCCCCCe-ecchhhccCCCCCEEeecCCCCCcccC
Q 039311 596 -ELPECLGQLSSRSILLLEKNNFE-RIPESIIQLSHLFSLGISHCERLHSLP 645 (909)
Q Consensus 596 -~lp~~l~~l~~L~~L~L~~n~l~-~lp~~i~~l~~L~~L~L~~c~~L~~lp 645 (909)
.+|.+++++++|+.|+|++|+++ .+| .++.+++|+.+++++|+.+...|
T Consensus 258 g~iP~~l~~L~~L~~L~Ls~N~l~g~iP-~~~~L~~L~~l~l~~N~~l~g~p 308 (313)
T d1ogqa_ 258 GTLPQGLTQLKFLHSLNVSFNNLCGEIP-QGGNLQRFDVSAYANNKCLCGSP 308 (313)
T ss_dssp ECCCGGGGGCTTCCEEECCSSEEEEECC-CSTTGGGSCGGGTCSSSEEESTT
T ss_pred ccCChHHhCCCCCCEEECcCCcccccCC-CcccCCCCCHHHhCCCccccCCC
Confidence 68888888888888888888888 677 45677788888888877665443
No 5
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.81 E-value=1.3e-18 Score=186.37 Aligned_cols=261 Identities=18% Similarity=0.198 Sum_probs=171.5
Q ss_pred CccEEEeeCCCCCccCCCCCCCCeeEEEcCCCCcccccc-ccccCCCCCEEecCCCcCCCcCCC-CCccccccccccccc
Q 039311 341 ELRYLQWHGCPLKSLSSKIPPENLVSLEMPHSSIKQLWK-GVQRLVNLKHINLSHSEHLTKIPD-LSLATNLESLNFQGC 418 (909)
Q Consensus 341 ~Lr~L~l~~~~l~~lp~~~~~~~L~~L~L~~~~i~~lp~-~~~~L~~L~~L~Ls~~~~l~~~p~-l~~l~~L~~L~L~~c 418 (909)
.++.++.++..++++|..++ .++++|+|++|+|+++|+ .+.++++|++|++++|.+....|+ +..+++|++|++++|
T Consensus 11 ~~~~~~C~~~~L~~lP~~l~-~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n 89 (305)
T d1xkua_ 11 HLRVVQCSDLGLEKVPKDLP-PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKN 89 (305)
T ss_dssp ETTEEECTTSCCCSCCCSCC-TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSS
T ss_pred cCCEEEecCCCCCccCCCCC-CCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEecccCC
Confidence 46788999999999999874 689999999999999996 588999999999999998877675 889999999999987
Q ss_pred cccceecccccCCCcccEeccccccCccccCccc--cCCcCcEEEccCCCCCcccCccccCcceeeccccCccccCcccc
Q 039311 419 TCLLETHSSIQYLNKLVVLNLKHCRSLTSLSTSI--HLGSLKKLILSGCSNLMSFPELSCNIEELSLDGTAIQEFPSSIE 496 (909)
Q Consensus 419 ~~l~~~p~~i~~L~~L~~L~L~~c~~l~~lp~~~--~l~~L~~L~Ls~c~~l~~lp~~~~~L~~L~L~~~~i~~lp~~i~ 496 (909)
. +..+|..+ ...|+.|.+.++. +..++... ....+..+....+...... ..+..+.
T Consensus 90 ~-l~~l~~~~--~~~l~~L~~~~n~-l~~l~~~~~~~~~~~~~l~~~~n~~~~~~------------------~~~~~~~ 147 (305)
T d1xkua_ 90 Q-LKELPEKM--PKTLQELRVHENE-ITKVRKSVFNGLNQMIVVELGTNPLKSSG------------------IENGAFQ 147 (305)
T ss_dssp C-CSBCCSSC--CTTCCEEECCSSC-CCBBCHHHHTTCTTCCEEECCSSCCCGGG------------------BCTTGGG
T ss_pred c-cCcCccch--hhhhhhhhccccc-hhhhhhhhhhccccccccccccccccccC------------------CCccccc
Confidence 5 45566543 3577788877743 44544432 3555666666554322111 1223344
Q ss_pred cCCCCCEEeccCCCCCCcCcccccCCCCCCeeecccccccccccCccee-ecCccccccCCCCeeecCcccccccccccc
Q 039311 497 RLSSLILLNLGNCLRLEGLPSKICKLKSLERLNLAEALKELKAEGIAIR-EVPSSIACLKNLGRLSFESFMCHEQMGLLL 575 (909)
Q Consensus 497 ~l~~L~~L~L~~c~~l~~lp~~l~~L~~L~~L~l~~~l~~L~l~~~~~~-~lp~~i~~l~~L~~L~l~~~~~~~~~~~~~ 575 (909)
.+++|+.+++.+|.. ..+|.. .+++|+.|++. ++... ..+..+..++.++.|.+++| .+.....
T Consensus 148 ~l~~L~~l~l~~n~l-~~l~~~--~~~~L~~L~l~---------~n~~~~~~~~~~~~~~~l~~L~~s~n---~l~~~~~ 212 (305)
T d1xkua_ 148 GMKKLSYIRIADTNI-TTIPQG--LPPSLTELHLD---------GNKITKVDAASLKGLNNLAKLGLSFN---SISAVDN 212 (305)
T ss_dssp GCTTCCEEECCSSCC-CSCCSS--CCTTCSEEECT---------TSCCCEECTGGGTTCTTCCEEECCSS---CCCEECT
T ss_pred cccccCccccccCCc-cccCcc--cCCccCEEECC---------CCcCCCCChhHhhccccccccccccc---ccccccc
Confidence 555556666555532 223322 13444444442 22222 22334555555566655542 2222223
Q ss_pred CccCCCCCCCEEecCCCCCCCcccccCCCCCCcEEECCCCCCeecchh-------hccCCCCCEEeecCCC
Q 039311 576 PISFGLTSLTYLRLTDCGIIELPECLGQLSSRSILLLEKNNFERIPES-------IIQLSHLFSLGISHCE 639 (909)
Q Consensus 576 ~~~~~l~~L~~L~Ls~~~l~~lp~~l~~l~~L~~L~L~~n~l~~lp~~-------i~~l~~L~~L~L~~c~ 639 (909)
..+.++++|++|+|++|.+.++|.++..+++|+.|+|++|+++.++.. ...+++|+.|+|++|+
T Consensus 213 ~~~~~l~~L~~L~L~~N~L~~lp~~l~~l~~L~~L~Ls~N~i~~i~~~~f~~~~~~~~~~~L~~L~L~~N~ 283 (305)
T d1xkua_ 213 GSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNP 283 (305)
T ss_dssp TTGGGSTTCCEEECCSSCCSSCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSS
T ss_pred ccccccccceeeecccccccccccccccccCCCEEECCCCccCccChhhccCcchhcccCCCCEEECCCCc
Confidence 335567788888888888888888888888888888888888877542 2346678888888765
No 6
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.77 E-value=1.4e-18 Score=186.98 Aligned_cols=249 Identities=16% Similarity=0.148 Sum_probs=184.7
Q ss_pred CCCCEEecCCCcCCC--cCCC-CCccccccccccccc-cccceecccccCCCcccEeccccccCccccCccc-cCCcCcE
Q 039311 385 VNLKHINLSHSEHLT--KIPD-LSLATNLESLNFQGC-TCLLETHSSIQYLNKLVVLNLKHCRSLTSLSTSI-HLGSLKK 459 (909)
Q Consensus 385 ~~L~~L~Ls~~~~l~--~~p~-l~~l~~L~~L~L~~c-~~l~~~p~~i~~L~~L~~L~L~~c~~l~~lp~~~-~l~~L~~ 459 (909)
.+++.|+|+++...+ .+|. ++++++|++|+|++| ...+.+|.+++++++|++|+|++|......+..+ .+.+|+.
T Consensus 50 ~~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~ 129 (313)
T d1ogqa_ 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred EEEEEEECCCCCCCCCCCCChHHhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhcc
Confidence 468888998887655 3444 888888888888874 4555788888888888888888865443333333 4677777
Q ss_pred EEccCCCCCcccCccccCcceeeccccCccccCcccccCCCCCEEeccCCCCCCcCcccccCCCCC-Ceeeccccccccc
Q 039311 460 LILSGCSNLMSFPELSCNIEELSLDGTAIQEFPSSIERLSSLILLNLGNCLRLEGLPSKICKLKSL-ERLNLAEALKELK 538 (909)
Q Consensus 460 L~Ls~c~~l~~lp~~~~~L~~L~L~~~~i~~lp~~i~~l~~L~~L~L~~c~~l~~lp~~l~~L~~L-~~L~l~~~l~~L~ 538 (909)
+++++|... ..+|.++++++.|+.+++++|...+.+|..+..+..+ +.+.+
T Consensus 130 l~l~~N~~~--------------------~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~-------- 181 (313)
T d1ogqa_ 130 LDFSYNALS--------------------GTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTI-------- 181 (313)
T ss_dssp EECCSSEEE--------------------SCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEEC--------
T ss_pred ccccccccc--------------------ccCchhhccCcccceeecccccccccccccccccccccccccc--------
Confidence 777664322 2567889999999999999998888999999888876 55554
Q ss_pred ccCccee-ecCccccccCCCCeeecCccccccccccccCccCCCCCCCEEecCCCCCCCcccccCCCCCCcEEECCCCCC
Q 039311 539 AEGIAIR-EVPSSIACLKNLGRLSFESFMCHEQMGLLLPISFGLTSLTYLRLTDCGIIELPECLGQLSSRSILLLEKNNF 617 (909)
Q Consensus 539 l~~~~~~-~lp~~i~~l~~L~~L~l~~~~~~~~~~~~~~~~~~l~~L~~L~Ls~~~l~~lp~~l~~l~~L~~L~L~~n~l 617 (909)
.++.+. ..|..+..+.. ..+++..+ ...+........+++|+.|++++|.+...+..++.+++|+.|+|++|++
T Consensus 182 -~~n~l~~~~~~~~~~l~~-~~l~l~~~---~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~~~~~~~~L~~L~Ls~N~l 256 (313)
T d1ogqa_ 182 -SRNRLTGKIPPTFANLNL-AFVDLSRN---MLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRI 256 (313)
T ss_dssp -CSSEEEEECCGGGGGCCC-SEEECCSS---EEEECCGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSCC
T ss_pred -cccccccccccccccccc-cccccccc---cccccccccccccccccccccccccccccccccccccccccccCccCee
Confidence 445554 34555555544 46777652 2222233346678999999999999987777899999999999999999
Q ss_pred e-ecchhhccCCCCCEEeecCCCCCcccCCC--CCCcCceecccCccccccc
Q 039311 618 E-RIPESIIQLSHLFSLGISHCERLHSLPEL--PCDLSDIEAHCCSSLEALS 666 (909)
Q Consensus 618 ~-~lp~~i~~l~~L~~L~L~~c~~L~~lp~l--~~sL~~L~i~~C~~L~~l~ 666 (909)
+ .+|..+.++++|++|+|++|..-..+|+. ..+|+.+++.+.+.|...|
T Consensus 257 ~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~~~L~~L~~l~l~~N~~l~g~p 308 (313)
T d1ogqa_ 257 YGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSP 308 (313)
T ss_dssp EECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTT
T ss_pred cccCChHHhCCCCCCEEECcCCcccccCCCcccCCCCCHHHhCCCccccCCC
Confidence 9 89999999999999999998644488874 3467777777776665543
No 7
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.76 E-value=7.5e-17 Score=175.74 Aligned_cols=301 Identities=19% Similarity=0.220 Sum_probs=186.9
Q ss_pred CCcEEEEecCCCCcCcceeecCCCCCCCCccEEEeeCCCCCccCCCCCCCCeeEEEcCCCCccccccccccCCCCCEEec
Q 039311 313 KLRFFKFYSSHYGENVNKVHNFRGLESTELRYLQWHGCPLKSLSSKIPPENLVSLEMPHSSIKQLWKGVQRLVNLKHINL 392 (909)
Q Consensus 313 ~Lr~L~l~~~~~~~~~~~~~~~~~l~~~~Lr~L~l~~~~l~~lp~~~~~~~L~~L~L~~~~i~~lp~~~~~L~~L~~L~L 392 (909)
+++.|+++++.+...+ . .+++|++|++++|.++.+|..+ .+|+.|+++++.++.++.- .+.|++|++
T Consensus 39 ~l~~LdLs~~~L~~lp------~--~~~~L~~L~Ls~N~l~~lp~~~--~~L~~L~l~~n~l~~l~~l---p~~L~~L~L 105 (353)
T d1jl5a_ 39 QAHELELNNLGLSSLP------E--LPPHLESLVASCNSLTELPELP--QSLKSLLVDNNNLKALSDL---PPLLEYLGV 105 (353)
T ss_dssp TCSEEECTTSCCSCCC------S--CCTTCSEEECCSSCCSSCCCCC--TTCCEEECCSSCCSCCCSC---CTTCCEEEC
T ss_pred CCCEEEeCCCCCCCCC------C--CCCCCCEEECCCCCCcccccch--hhhhhhhhhhcccchhhhh---ccccccccc
Confidence 5777787766543221 1 1468899999999999998764 5899999999988877642 246899999
Q ss_pred CCCcCCCcCCCCCccccccccccccccccceecccccCCCcccEeccccccCccccCccccCCcCcEEEccCCCCCcccC
Q 039311 393 SHSEHLTKIPDLSLATNLESLNFQGCTCLLETHSSIQYLNKLVVLNLKHCRSLTSLSTSIHLGSLKKLILSGCSNLMSFP 472 (909)
Q Consensus 393 s~~~~l~~~p~l~~l~~L~~L~L~~c~~l~~~p~~i~~L~~L~~L~L~~c~~l~~lp~~~~l~~L~~L~Ls~c~~l~~lp 472 (909)
++|. +..+|.++.+++|++|++++|... ..+.. ...+..+.+..+.. ........++.++.|.++++.. ..++
T Consensus 106 ~~n~-l~~lp~~~~l~~L~~L~l~~~~~~-~~~~~---~~~l~~l~~~~~~~-~~~~~l~~l~~l~~L~l~~n~~-~~~~ 178 (353)
T d1jl5a_ 106 SNNQ-LEKLPELQNSSFLKIIDVDNNSLK-KLPDL---PPSLEFIAAGNNQL-EELPELQNLPFLTAIYADNNSL-KKLP 178 (353)
T ss_dssp CSSC-CSSCCCCTTCTTCCEEECCSSCCS-CCCCC---CTTCCEEECCSSCC-SSCCCCTTCTTCCEEECCSSCC-SSCC
T ss_pred cccc-cccccchhhhccceeecccccccc-ccccc---cccccchhhccccc-cccccccccccceecccccccc-cccc
Confidence 9887 456778888999999999887543 33333 34556666655432 2222223578888898887654 3445
Q ss_pred ccccCcceeeccccCccccCcccccCCCCCEEeccCCCCCCcCcccccCCCCCCeeecccccccccccCcceeecCcccc
Q 039311 473 ELSCNIEELSLDGTAIQEFPSSIERLSSLILLNLGNCLRLEGLPSKICKLKSLERLNLAEALKELKAEGIAIREVPSSIA 552 (909)
Q Consensus 473 ~~~~~L~~L~L~~~~i~~lp~~i~~l~~L~~L~L~~c~~l~~lp~~l~~L~~L~~L~l~~~l~~L~l~~~~~~~lp~~i~ 552 (909)
......+.+...++.+..+|. +..++.|+.+++++|.. ..+|.. ..++..+.+.. +.+...+..
T Consensus 179 ~~~~~~~~l~~~~~~~~~~~~-~~~l~~L~~l~l~~n~~-~~~~~~---~~~l~~~~~~~---------~~~~~~~~~-- 242 (353)
T d1jl5a_ 179 DLPLSLESIVAGNNILEELPE-LQNLPFLTTIYADNNLL-KTLPDL---PPSLEALNVRD---------NYLTDLPEL-- 242 (353)
T ss_dssp CCCTTCCEEECCSSCCSSCCC-CTTCTTCCEEECCSSCC-SSCCSC---CTTCCEEECCS---------SCCSCCCCC--
T ss_pred ccccccccccccccccccccc-ccccccccccccccccc-cccccc---ccccccccccc---------ccccccccc--
Confidence 555556677777776666654 56788899999988743 334432 23344443321 111111111
Q ss_pred ccCCCCeeecCccccccc------------cccccCc-cCCCCCCCEEecCCCCCCCcccccCCCCCCcEEECCCCCCee
Q 039311 553 CLKNLGRLSFESFMCHEQ------------MGLLLPI-SFGLTSLTYLRLTDCGIIELPECLGQLSSRSILLLEKNNFER 619 (909)
Q Consensus 553 ~l~~L~~L~l~~~~~~~~------------~~~~~~~-~~~l~~L~~L~Ls~~~l~~lp~~l~~l~~L~~L~L~~n~l~~ 619 (909)
...+....+..+.+..+ ....+.. ...+++|++|+|++|++.++|.. +++|+.|+|++|+++.
T Consensus 243 -~~~l~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~---~~~L~~L~L~~N~L~~ 318 (353)
T d1jl5a_ 243 -PQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIELPAL---PPRLERLIASFNHLAE 318 (353)
T ss_dssp -CTTCCEEECCSSCCSEESCCCTTCCEEECCSSCCSEECCCCTTCCEEECCSSCCSCCCCC---CTTCCEEECCSSCCSC
T ss_pred -cccccccccccccccccccccchhcccccccCccccccccCCCCCEEECCCCccCccccc---cCCCCEEECCCCcCCc
Confidence 11122222211111110 0011111 12356788888888887777743 5678888888888887
Q ss_pred cchhhccCCCCCEEeecCCCCCcccCCCCCCcCceecc
Q 039311 620 IPESIIQLSHLFSLGISHCERLHSLPELPCDLSDIEAH 657 (909)
Q Consensus 620 lp~~i~~l~~L~~L~L~~c~~L~~lp~l~~sL~~L~i~ 657 (909)
+|.. +++|+.|+|++|+ ++++|++|.+|+.|.+.
T Consensus 319 l~~~---~~~L~~L~L~~N~-L~~lp~~~~~L~~L~~~ 352 (353)
T d1jl5a_ 319 VPEL---PQNLKQLHVEYNP-LREFPDIPESVEDLRMN 352 (353)
T ss_dssp CCCC---CTTCCEEECCSSC-CSSCCCCCTTCCEEECC
T ss_pred cccc---cCCCCEEECcCCc-CCCCCccccccCeeECc
Confidence 7743 4578888888875 77888888778777664
No 8
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.72 E-value=3e-16 Score=167.80 Aligned_cols=241 Identities=17% Similarity=0.188 Sum_probs=148.5
Q ss_pred CCCccEEEeeCCCCCccCC-CC-CCCCeeEEEcCCCCccccc-cccccCCCCCEEecCCCcCCCcCCCCCcccccccccc
Q 039311 339 STELRYLQWHGCPLKSLSS-KI-PPENLVSLEMPHSSIKQLW-KGVQRLVNLKHINLSHSEHLTKIPDLSLATNLESLNF 415 (909)
Q Consensus 339 ~~~Lr~L~l~~~~l~~lp~-~~-~~~~L~~L~L~~~~i~~lp-~~~~~L~~L~~L~Ls~~~~l~~~p~l~~l~~L~~L~L 415 (909)
++.+++|++++|.++.+|. .| .+.+|++|+++++.+..++ ..+.++++|++|++++|++ +.+|. .....|+.|.+
T Consensus 30 ~~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n~l-~~l~~-~~~~~l~~L~~ 107 (305)
T d1xkua_ 30 PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQL-KELPE-KMPKTLQELRV 107 (305)
T ss_dssp CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCC-SBCCS-SCCTTCCEEEC
T ss_pred CCCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEecccCCcc-CcCcc-chhhhhhhhhc
Confidence 4679999999999999986 45 7889999999999999884 5688999999999999974 44554 23467888888
Q ss_pred ccccccceecccccCCCcccEeccccccCcccc--Cccc-cCCcCcEEEccCCCCCcccCc-cccCcceeeccccCccc-
Q 039311 416 QGCTCLLETHSSIQYLNKLVVLNLKHCRSLTSL--STSI-HLGSLKKLILSGCSNLMSFPE-LSCNIEELSLDGTAIQE- 490 (909)
Q Consensus 416 ~~c~~l~~~p~~i~~L~~L~~L~L~~c~~l~~l--p~~~-~l~~L~~L~Ls~c~~l~~lp~-~~~~L~~L~L~~~~i~~- 490 (909)
.++......+..+.....+..++...+...... +..+ .+++|+.+++++|... .+|. ...++++|+++++.+..
T Consensus 108 ~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~-~l~~~~~~~L~~L~l~~n~~~~~ 186 (305)
T d1xkua_ 108 HENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLPPSLTELHLDGNKITKV 186 (305)
T ss_dssp CSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCCTTCSEEECTTSCCCEE
T ss_pred cccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCCcc-ccCcccCCccCEEECCCCcCCCC
Confidence 887655444445566777788887765432221 2222 4677888877775432 2322 33445555555554442
Q ss_pred cCcccccCCCCCEEeccCCCCCCcCcccccCCCCCCeeecccccccccccCcceeecCccccccCCCCeeecCccccccc
Q 039311 491 FPSSIERLSSLILLNLGNCLRLEGLPSKICKLKSLERLNLAEALKELKAEGIAIREVPSSIACLKNLGRLSFESFMCHEQ 570 (909)
Q Consensus 491 lp~~i~~l~~L~~L~L~~c~~l~~lp~~l~~L~~L~~L~l~~~l~~L~l~~~~~~~lp~~i~~l~~L~~L~l~~~~~~~~ 570 (909)
.+..+.+++.++.|++++|......+.. +..+++|+.|++++|. +
T Consensus 187 ~~~~~~~~~~l~~L~~s~n~l~~~~~~~--------------------------------~~~l~~L~~L~L~~N~---L 231 (305)
T d1xkua_ 187 DAASLKGLNNLAKLGLSFNSISAVDNGS--------------------------------LANTPHLRELHLNNNK---L 231 (305)
T ss_dssp CTGGGTTCTTCCEEECCSSCCCEECTTT--------------------------------GGGSTTCCEEECCSSC---C
T ss_pred ChhHhhcccccccccccccccccccccc--------------------------------ccccccceeeeccccc---c
Confidence 2334445555555555554333333333 4444555555555422 1
Q ss_pred cccccCccCCCCCCCEEecCCCCCCCccc-------ccCCCCCCcEEECCCCCCe
Q 039311 571 MGLLLPISFGLTSLTYLRLTDCGIIELPE-------CLGQLSSRSILLLEKNNFE 618 (909)
Q Consensus 571 ~~~~~~~~~~l~~L~~L~Ls~~~l~~lp~-------~l~~l~~L~~L~L~~n~l~ 618 (909)
.. .++.+..+++|+.|+|++|++..++. ....+++|+.|+|++|.+.
T Consensus 232 ~~-lp~~l~~l~~L~~L~Ls~N~i~~i~~~~f~~~~~~~~~~~L~~L~L~~N~~~ 285 (305)
T d1xkua_ 232 VK-VPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQ 285 (305)
T ss_dssp SS-CCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSC
T ss_pred cc-cccccccccCCCEEECCCCccCccChhhccCcchhcccCCCCEEECCCCcCc
Confidence 11 12234456666666666666665432 2345677788888887766
No 9
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.70 E-value=1e-15 Score=166.49 Aligned_cols=292 Identities=20% Similarity=0.188 Sum_probs=193.9
Q ss_pred CCccEEEeeCCCCCccCCCCCCCCeeEEEcCCCCccccccccccCCCCCEEecCCCcCCCcCCCCCcccccccccccccc
Q 039311 340 TELRYLQWHGCPLKSLSSKIPPENLVSLEMPHSSIKQLWKGVQRLVNLKHINLSHSEHLTKIPDLSLATNLESLNFQGCT 419 (909)
Q Consensus 340 ~~Lr~L~l~~~~l~~lp~~~~~~~L~~L~L~~~~i~~lp~~~~~L~~L~~L~Ls~~~~l~~~p~l~~l~~L~~L~L~~c~ 419 (909)
.+++.|+++++.++.+|.. +.+|++|++++|+|+.+|..+ .+|+.|++++|.+ +.++++. +.|++|++++|.
T Consensus 38 ~~l~~LdLs~~~L~~lp~~--~~~L~~L~Ls~N~l~~lp~~~---~~L~~L~l~~n~l-~~l~~lp--~~L~~L~L~~n~ 109 (353)
T d1jl5a_ 38 RQAHELELNNLGLSSLPEL--PPHLESLVASCNSLTELPELP---QSLKSLLVDNNNL-KALSDLP--PLLEYLGVSNNQ 109 (353)
T ss_dssp HTCSEEECTTSCCSCCCSC--CTTCSEEECCSSCCSSCCCCC---TTCCEEECCSSCC-SCCCSCC--TTCCEEECCSSC
T ss_pred cCCCEEEeCCCCCCCCCCC--CCCCCEEECCCCCCcccccch---hhhhhhhhhhccc-chhhhhc--cccccccccccc
Confidence 4688999999999999974 468999999999999999754 5789999998864 4455432 469999999876
Q ss_pred ccceecccccCCCcccEeccccccCccccCccccCCcCcEEEccCCCCCccc-CccccCcceeeccccCccccCcccccC
Q 039311 420 CLLETHSSIQYLNKLVVLNLKHCRSLTSLSTSIHLGSLKKLILSGCSNLMSF-PELSCNIEELSLDGTAIQEFPSSIERL 498 (909)
Q Consensus 420 ~l~~~p~~i~~L~~L~~L~L~~c~~l~~lp~~~~l~~L~~L~Ls~c~~l~~l-p~~~~~L~~L~L~~~~i~~lp~~i~~l 498 (909)
+..+| .++.+++|++|++++|. +...+. ....+..+.+..+...... ......++.|.+.++.+..++...
T Consensus 110 -l~~lp-~~~~l~~L~~L~l~~~~-~~~~~~--~~~~l~~l~~~~~~~~~~~~l~~l~~l~~L~l~~n~~~~~~~~~--- 181 (353)
T d1jl5a_ 110 -LEKLP-ELQNSSFLKIIDVDNNS-LKKLPD--LPPSLEFIAAGNNQLEELPELQNLPFLTAIYADNNSLKKLPDLP--- 181 (353)
T ss_dssp -CSSCC-CCTTCTTCCEEECCSSC-CSCCCC--CCTTCCEEECCSSCCSSCCCCTTCTTCCEEECCSSCCSSCCCCC---
T ss_pred -ccccc-chhhhccceeecccccc-cccccc--ccccccchhhccccccccccccccccceeccccccccccccccc---
Confidence 45666 46889999999998864 333333 2466777777665443221 123456778888888877665433
Q ss_pred CCCCEEeccCCCCCCcCcccccCCCCCCeeecccccccccccCcceeecCccccccCCCCeeecCcccccccccccc---
Q 039311 499 SSLILLNLGNCLRLEGLPSKICKLKSLERLNLAEALKELKAEGIAIREVPSSIACLKNLGRLSFESFMCHEQMGLLL--- 575 (909)
Q Consensus 499 ~~L~~L~L~~c~~l~~lp~~l~~L~~L~~L~l~~~l~~L~l~~~~~~~lp~~i~~l~~L~~L~l~~~~~~~~~~~~~--- 575 (909)
...+.+...++ ....+|. ...++.|+.+++. ++....++.. ..++..+.+.++.+........
T Consensus 182 ~~~~~l~~~~~-~~~~~~~-~~~l~~L~~l~l~---------~n~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~l~ 247 (353)
T d1jl5a_ 182 LSLESIVAGNN-ILEELPE-LQNLPFLTTIYAD---------NNLLKTLPDL---PPSLEALNVRDNYLTDLPELPQSLT 247 (353)
T ss_dssp TTCCEEECCSS-CCSSCCC-CTTCTTCCEEECC---------SSCCSSCCSC---CTTCCEEECCSSCCSCCCCCCTTCC
T ss_pred ccccccccccc-ccccccc-ccccccccccccc---------cccccccccc---ccccccccccccccccccccccccc
Confidence 23344554443 3344443 5677788877763 3344444432 3455666665533322211000
Q ss_pred ---------CccCC-CCCCCEEecCCCCCCCcccccCCCCCCcEEECCCCCCeecchhhccCCCCCEEeecCCCCCcccC
Q 039311 576 ---------PISFG-LTSLTYLRLTDCGIIELPECLGQLSSRSILLLEKNNFERIPESIIQLSHLFSLGISHCERLHSLP 645 (909)
Q Consensus 576 ---------~~~~~-l~~L~~L~Ls~~~l~~lp~~l~~l~~L~~L~L~~n~l~~lp~~i~~l~~L~~L~L~~c~~L~~lp 645 (909)
..+.. .......++..+.+..+ ...+++|++|+|++|+++.+|.. +++|+.|+|++| .++++|
T Consensus 248 ~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~---~~~~~~L~~L~Ls~N~l~~lp~~---~~~L~~L~L~~N-~L~~l~ 320 (353)
T d1jl5a_ 248 FLDVSENIFSGLSELPPNLYYLNASSNEIRSL---CDLPPSLEELNVSNNKLIELPAL---PPRLERLIASFN-HLAEVP 320 (353)
T ss_dssp EEECCSSCCSEESCCCTTCCEEECCSSCCSEE---CCCCTTCCEEECCSSCCSCCCCC---CTTCCEEECCSS-CCSCCC
T ss_pred ccccccccccccccccchhcccccccCccccc---cccCCCCCEEECCCCccCccccc---cCCCCEEECCCC-cCCccc
Confidence 00000 11223333333333322 24468999999999999999954 689999999987 589999
Q ss_pred CCCCCcCceecccCcccccccCcc
Q 039311 646 ELPCDLSDIEAHCCSSLEALSGLS 669 (909)
Q Consensus 646 ~l~~sL~~L~i~~C~~L~~l~~~~ 669 (909)
+.+.+|++|++++|+ |+++|..+
T Consensus 321 ~~~~~L~~L~L~~N~-L~~lp~~~ 343 (353)
T d1jl5a_ 321 ELPQNLKQLHVEYNP-LREFPDIP 343 (353)
T ss_dssp CCCTTCCEEECCSSC-CSSCCCCC
T ss_pred cccCCCCEEECcCCc-CCCCCccc
Confidence 999999999999997 99988754
No 10
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.65 E-value=2.1e-15 Score=157.57 Aligned_cols=174 Identities=22% Similarity=0.233 Sum_probs=97.3
Q ss_pred cccccccccccccceecccccCCCcccEeccccccCccccCccccCCcCcEEEccCCCCCcccCccccCcceeeccccCc
Q 039311 409 NLESLNFQGCTCLLETHSSIQYLNKLVVLNLKHCRSLTSLSTSIHLGSLKKLILSGCSNLMSFPELSCNIEELSLDGTAI 488 (909)
Q Consensus 409 ~L~~L~L~~c~~l~~~p~~i~~L~~L~~L~L~~c~~l~~lp~~~~l~~L~~L~Ls~c~~l~~lp~~~~~L~~L~L~~~~i 488 (909)
+|++|+|++|....-.+..+..+++|++|+|++| .++.+|....+++|++|++++ |.+
T Consensus 32 ~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N-~l~~l~~~~~l~~L~~L~Ls~---------------------N~l 89 (266)
T d1p9ag_ 32 DTTILHLSENLLYTFSLATLMPYTRLTQLNLDRA-ELTKLQVDGTLPVLGTLDLSH---------------------NQL 89 (266)
T ss_dssp TCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTS-CCCEEECCSCCTTCCEEECCS---------------------SCC
T ss_pred CCCEEECcCCcCCCcCHHHhhccccccccccccc-ccccccccccccccccccccc---------------------ccc
Confidence 3444444444322222234556666666666664 344554433445555554444 444
Q ss_pred cccCcccccCCCCCEEeccCCCCCCcCcccccCCCCCCeeecccccccccccCcceeecCccccccCCCCeeecCccccc
Q 039311 489 QEFPSSIERLSSLILLNLGNCLRLEGLPSKICKLKSLERLNLAEALKELKAEGIAIREVPSSIACLKNLGRLSFESFMCH 568 (909)
Q Consensus 489 ~~lp~~i~~l~~L~~L~L~~c~~l~~lp~~l~~L~~L~~L~l~~~l~~L~l~~~~~~~lp~~i~~l~~L~~L~l~~~~~~ 568 (909)
...+..+..+++|+.|++++|......+..+..+.+++.|++ .++.+..+|.
T Consensus 90 ~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l---------~~n~l~~l~~------------------- 141 (266)
T d1p9ag_ 90 QSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYL---------KGNELKTLPP------------------- 141 (266)
T ss_dssp SSCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEEC---------TTSCCCCCCT-------------------
T ss_pred cccccccccccccccccccccccceeeccccccccccccccc---------cccccceecc-------------------
Confidence 445556666777777777776554444444455555555544 2222222222
Q ss_pred cccccccCccCCCCCCCEEecCCCCCCCcc-cccCCCCCCcEEECCCCCCeecchhhccCCCCCEEeecCCC
Q 039311 569 EQMGLLLPISFGLTSLTYLRLTDCGIIELP-ECLGQLSSRSILLLEKNNFERIPESIIQLSHLFSLGISHCE 639 (909)
Q Consensus 569 ~~~~~~~~~~~~l~~L~~L~Ls~~~l~~lp-~~l~~l~~L~~L~L~~n~l~~lp~~i~~l~~L~~L~L~~c~ 639 (909)
..+..+++|+.|++++|++..++ ..+..+++|+.|+|++|+++.+|.++..+++|+.|+|++|+
T Consensus 142 -------~~~~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~~lp~~~~~~~~L~~L~L~~Np 206 (266)
T d1p9ag_ 142 -------GLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNP 206 (266)
T ss_dssp -------TTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCC
T ss_pred -------ccccccccchhcccccccccccCccccccccccceeecccCCCcccChhHCCCCCCCEEEecCCC
Confidence 12334566777777777776654 34566777777777777777777777777777777777664
No 11
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.65 E-value=1.3e-15 Score=159.16 Aligned_cols=192 Identities=19% Similarity=0.196 Sum_probs=124.9
Q ss_pred CccEEEeeCCCCCccCCCCCCCCeeEEEcCCCCcccccc-ccccCCCCCEEecCCCcCCCcCCCCCcccccccccccccc
Q 039311 341 ELRYLQWHGCPLKSLSSKIPPENLVSLEMPHSSIKQLWK-GVQRLVNLKHINLSHSEHLTKIPDLSLATNLESLNFQGCT 419 (909)
Q Consensus 341 ~Lr~L~l~~~~l~~lp~~~~~~~L~~L~L~~~~i~~lp~-~~~~L~~L~~L~Ls~~~~l~~~p~l~~l~~L~~L~L~~c~ 419 (909)
.+...+.+++.++.+|..++ .+|++|+|++|.|+.+|. .+.++++|++|+|++|.+ +.+|.++.+++|++|++++|.
T Consensus 11 ~~~~v~C~~~~L~~iP~~lp-~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l-~~l~~~~~l~~L~~L~Ls~N~ 88 (266)
T d1p9ag_ 11 SHLEVNCDKRNLTALPPDLP-KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAEL-TKLQVDGTLPVLGTLDLSHNQ 88 (266)
T ss_dssp TCCEEECTTSCCSSCCSCCC-TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCC-CEEECCSCCTTCCEEECCSSC
T ss_pred CCeEEEccCCCCCeeCcCcC-cCCCEEECcCCcCCCcCHHHhhccccccccccccccc-ccccccccccccccccccccc
Confidence 44556788888999998775 689999999999999884 578899999999999864 566777888889999988875
Q ss_pred ccceecccccCCCcccEeccccccCccccCccc-cCCcCcEEEccCCCCCcccCccccCcceeeccccCccccCcc-ccc
Q 039311 420 CLLETHSSIQYLNKLVVLNLKHCRSLTSLSTSI-HLGSLKKLILSGCSNLMSFPELSCNIEELSLDGTAIQEFPSS-IER 497 (909)
Q Consensus 420 ~l~~~p~~i~~L~~L~~L~L~~c~~l~~lp~~~-~l~~L~~L~Ls~c~~l~~lp~~~~~L~~L~L~~~~i~~lp~~-i~~ 497 (909)
+...+..+..+++|+.|+++++......+... .+.+++.|++++ |.+..+|.. +..
T Consensus 89 -l~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~---------------------n~l~~l~~~~~~~ 146 (266)
T d1p9ag_ 89 -LQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKG---------------------NELKTLPPGLLTP 146 (266)
T ss_dssp -CSSCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTT---------------------SCCCCCCTTTTTT
T ss_pred -ccccccccccccccccccccccccceeeccccccccccccccccc---------------------cccceeccccccc
Confidence 44556677788888888888765332222222 355666665555 444444333 344
Q ss_pred CCCCCEEeccCCCCCCcCcccccCCCCCCeeecccccccccccCcceeecCccccccCCCCeeecCcc
Q 039311 498 LSSLILLNLGNCLRLEGLPSKICKLKSLERLNLAEALKELKAEGIAIREVPSSIACLKNLGRLSFESF 565 (909)
Q Consensus 498 l~~L~~L~L~~c~~l~~lp~~l~~L~~L~~L~l~~~l~~L~l~~~~~~~lp~~i~~l~~L~~L~l~~~ 565 (909)
+++|+.|++++|......+..+..+++|+.|++ ++|.++.+|.++..+++|+.|++++|
T Consensus 147 l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~L---------s~N~L~~lp~~~~~~~~L~~L~L~~N 205 (266)
T d1p9ag_ 147 TPKLEKLSLANNNLTELPAGLLNGLENLDTLLL---------QENSLYTIPKGFFGSHLLPFAFLHGN 205 (266)
T ss_dssp CTTCCEEECTTSCCSCCCTTTTTTCTTCCEEEC---------CSSCCCCCCTTTTTTCCCSEEECCSC
T ss_pred cccchhcccccccccccCccccccccccceeec---------ccCCCcccChhHCCCCCCCEEEecCC
Confidence 566666666665444333344555555555554 33445555555555555555555543
No 12
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.64 E-value=3.8e-16 Score=165.11 Aligned_cols=216 Identities=21% Similarity=0.196 Sum_probs=129.5
Q ss_pred EEeeCCCCCccCCCCCCCCeeEEEcCCCCcccccc-ccccCCCCCEEecCCCcCCCcCCC-CCccccccccccccccccc
Q 039311 345 LQWHGCPLKSLSSKIPPENLVSLEMPHSSIKQLWK-GVQRLVNLKHINLSHSEHLTKIPD-LSLATNLESLNFQGCTCLL 422 (909)
Q Consensus 345 L~l~~~~l~~lp~~~~~~~L~~L~L~~~~i~~lp~-~~~~L~~L~~L~Ls~~~~l~~~p~-l~~l~~L~~L~L~~c~~l~ 422 (909)
+..++..++++|..++ .++++|+|++|+|+++|. .+.++++|++|+++++.+....+. +..++.++.+....+..+.
T Consensus 16 v~c~~~~L~~iP~~ip-~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~ 94 (284)
T d1ozna_ 16 TSCPQQGLQAVPVGIP-AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLR 94 (284)
T ss_dssp EECCSSCCSSCCTTCC-TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCC
T ss_pred EEcCCCCCCccCCCCC-CCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccccc
Confidence 4556777888887764 568889999999988885 478888888888888875554444 5566777776665544444
Q ss_pred ee-cccccCCCcccEeccccccCccccCcc-c-cCCcCcEEEccCCCCCcccCccccCcceeeccccCccccCc-ccccC
Q 039311 423 ET-HSSIQYLNKLVVLNLKHCRSLTSLSTS-I-HLGSLKKLILSGCSNLMSFPELSCNIEELSLDGTAIQEFPS-SIERL 498 (909)
Q Consensus 423 ~~-p~~i~~L~~L~~L~L~~c~~l~~lp~~-~-~l~~L~~L~Ls~c~~l~~lp~~~~~L~~L~L~~~~i~~lp~-~i~~l 498 (909)
.+ +..++.+++|++|++++|.. ..++.. . ...+|+.+++ ++|.++.+|. .+..+
T Consensus 95 ~l~~~~~~~l~~L~~L~l~~n~~-~~~~~~~~~~~~~L~~l~l---------------------~~N~l~~i~~~~f~~~ 152 (284)
T d1ozna_ 95 SVDPATFHGLGRLHTLHLDRCGL-QELGPGLFRGLAALQYLYL---------------------QDNALQALPDDTFRDL 152 (284)
T ss_dssp CCCTTTTTTCTTCCEEECTTSCC-CCCCTTTTTTCTTCCEEEC---------------------CSSCCCCCCTTTTTTC
T ss_pred cccchhhcccccCCEEecCCccc-ccccccccchhcccchhhh---------------------ccccccccChhHhccc
Confidence 44 44566666666666666442 222221 1 2344444444 4445555542 34556
Q ss_pred CCCCEEeccCCCCCCcCcccccCCCCCCeeecccccccccccCcceeecCccccccCCCCeeecCccccccccccccCcc
Q 039311 499 SSLILLNLGNCLRLEGLPSKICKLKSLERLNLAEALKELKAEGIAIREVPSSIACLKNLGRLSFESFMCHEQMGLLLPIS 578 (909)
Q Consensus 499 ~~L~~L~L~~c~~l~~lp~~l~~L~~L~~L~l~~~l~~L~l~~~~~~~lp~~i~~l~~L~~L~l~~~~~~~~~~~~~~~~ 578 (909)
++|+.|++++|......+..+..+++|+.+ .+++| ++.......+
T Consensus 153 ~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l--------------------------------~l~~N---~l~~i~~~~f 197 (284)
T d1ozna_ 153 GNLTHLFLHGNRISSVPERAFRGLHSLDRL--------------------------------LLHQN---RVAHVHPHAF 197 (284)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEE--------------------------------ECCSS---CCCEECTTTT
T ss_pred cchhhcccccCcccccchhhhccccccchh--------------------------------hhhhc---cccccChhHh
Confidence 666666666654322222333444444444 44331 1222223335
Q ss_pred CCCCCCCEEecCCCCCCCcc-cccCCCCCCcEEECCCCCCe
Q 039311 579 FGLTSLTYLRLTDCGIIELP-ECLGQLSSRSILLLEKNNFE 618 (909)
Q Consensus 579 ~~l~~L~~L~Ls~~~l~~lp-~~l~~l~~L~~L~L~~n~l~ 618 (909)
..+++|+.|++++|.+..++ ..++.+++|+.|++++|.+.
T Consensus 198 ~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~ 238 (284)
T d1ozna_ 198 RDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWV 238 (284)
T ss_dssp TTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEE
T ss_pred hhhhhcccccccccccccccccccccccccCEEEecCCCCC
Confidence 55677777777778777654 46777888888888888766
No 13
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61 E-value=1.2e-14 Score=153.23 Aligned_cols=218 Identities=22% Similarity=0.229 Sum_probs=131.9
Q ss_pred EEEcCCCCccccccccccCCCCCEEecCCCcCCCcCCC-CCccccccccccccccccceecccccCCCcccEeccccccC
Q 039311 366 SLEMPHSSIKQLWKGVQRLVNLKHINLSHSEHLTKIPD-LSLATNLESLNFQGCTCLLETHSSIQYLNKLVVLNLKHCRS 444 (909)
Q Consensus 366 ~L~L~~~~i~~lp~~~~~L~~L~~L~Ls~~~~l~~~p~-l~~l~~L~~L~L~~c~~l~~~p~~i~~L~~L~~L~L~~c~~ 444 (909)
.++.++.+++++|..+. ..+++|+|++|.+.+..+. +.++++|++|+++++......+..+..+..++.+....+..
T Consensus 15 ~v~c~~~~L~~iP~~ip--~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~ 92 (284)
T d1ozna_ 15 TTSCPQQGLQAVPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQ 92 (284)
T ss_dssp EEECCSSCCSSCCTTCC--TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTT
T ss_pred EEEcCCCCCCccCCCCC--CCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccc
Confidence 34566667777776553 4677778877765433332 66666677776666554433344444455555554444444
Q ss_pred ccccCccccCCcCcEEEccCCCCCcccCccccCcceeeccccCccccCcccccCCCCCEEeccCCCCCCcCcccccCCCC
Q 039311 445 LTSLSTSIHLGSLKKLILSGCSNLMSFPELSCNIEELSLDGTAIQEFPSSIERLSSLILLNLGNCLRLEGLPSKICKLKS 524 (909)
Q Consensus 445 l~~lp~~~~l~~L~~L~Ls~c~~l~~lp~~~~~L~~L~L~~~~i~~lp~~i~~l~~L~~L~L~~c~~l~~lp~~l~~L~~ 524 (909)
++.++. ..+.++++|+.|++++|......+..+..+++
T Consensus 93 ~~~l~~------------------------------------------~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~ 130 (284)
T d1ozna_ 93 LRSVDP------------------------------------------ATFHGLGRLHTLHLDRCGLQELGPGLFRGLAA 130 (284)
T ss_dssp CCCCCT------------------------------------------TTTTTCTTCCEEECTTSCCCCCCTTTTTTCTT
T ss_pred cccccc------------------------------------------hhhcccccCCEEecCCcccccccccccchhcc
Confidence 443322 22334444444444444332222233334444
Q ss_pred CCeeecccccccccccCcceeecCc-cccccCCCCeeecCccccccccccccCccCCCCCCCEEecCCCCCCCc-ccccC
Q 039311 525 LERLNLAEALKELKAEGIAIREVPS-SIACLKNLGRLSFESFMCHEQMGLLLPISFGLTSLTYLRLTDCGIIEL-PECLG 602 (909)
Q Consensus 525 L~~L~l~~~l~~L~l~~~~~~~lp~-~i~~l~~L~~L~l~~~~~~~~~~~~~~~~~~l~~L~~L~Ls~~~l~~l-p~~l~ 602 (909)
|+.+++ .++.++.+|. .+..+++|+.|++++| ++.......+.++++|+.+++++|.+..+ |..+.
T Consensus 131 L~~l~l---------~~N~l~~i~~~~f~~~~~L~~L~l~~N---~l~~l~~~~f~~l~~L~~l~l~~N~l~~i~~~~f~ 198 (284)
T d1ozna_ 131 LQYLYL---------QDNALQALPDDTFRDLGNLTHLFLHGN---RISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFR 198 (284)
T ss_dssp CCEEEC---------CSSCCCCCCTTTTTTCTTCCEEECCSS---CCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTT
T ss_pred cchhhh---------ccccccccChhHhccccchhhcccccC---cccccchhhhccccccchhhhhhccccccChhHhh
Confidence 444443 2333444432 3445566666666652 23322334466789999999999999874 78899
Q ss_pred CCCCCcEEECCCCCCeecc-hhhccCCCCCEEeecCCC
Q 039311 603 QLSSRSILLLEKNNFERIP-ESIIQLSHLFSLGISHCE 639 (909)
Q Consensus 603 ~l~~L~~L~L~~n~l~~lp-~~i~~l~~L~~L~L~~c~ 639 (909)
.+++|+.|++++|++..++ ..+..+++|+.|+|++++
T Consensus 199 ~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~ 236 (284)
T d1ozna_ 199 DLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNP 236 (284)
T ss_dssp TCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSC
T ss_pred hhhhcccccccccccccccccccccccccCEEEecCCC
Confidence 9999999999999999766 467899999999999875
No 14
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.49 E-value=1e-13 Score=142.38 Aligned_cols=186 Identities=22% Similarity=0.283 Sum_probs=135.4
Q ss_pred cEEEeeCCCCCccCCCCCCCCeeEEEcCCCCcccccc-ccccCCCCCEEecCCCcCCCcCCC--CCcccccccccccccc
Q 039311 343 RYLQWHGCPLKSLSSKIPPENLVSLEMPHSSIKQLWK-GVQRLVNLKHINLSHSEHLTKIPD--LSLATNLESLNFQGCT 419 (909)
Q Consensus 343 r~L~l~~~~l~~lp~~~~~~~L~~L~L~~~~i~~lp~-~~~~L~~L~~L~Ls~~~~l~~~p~--l~~l~~L~~L~L~~c~ 419 (909)
+.++.++..++.+|..+. .++++|++++|.|+.+|. .+.++++|++|++++|.+...++. +..++++++|.+..+.
T Consensus 11 ~~i~c~~~~l~~iP~~l~-~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n 89 (242)
T d1xwdc1 11 RVFLCQESKVTEIPSDLP-RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKAN 89 (242)
T ss_dssp SEEEEESCSCSSCCSCSC-SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCT
T ss_pred CEEEEeCCCCCCcCCCCC-CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccccc
Confidence 577888888999998774 589999999999999986 478899999999999988776654 7789999999988765
Q ss_pred cccee-cccccCCCcccEeccccccCccccCccccCCcCcEEEc--cCCCCCcccCc-----cccCcceeeccccCcccc
Q 039311 420 CLLET-HSSIQYLNKLVVLNLKHCRSLTSLSTSIHLGSLKKLIL--SGCSNLMSFPE-----LSCNIEELSLDGTAIQEF 491 (909)
Q Consensus 420 ~l~~~-p~~i~~L~~L~~L~L~~c~~l~~lp~~~~l~~L~~L~L--s~c~~l~~lp~-----~~~~L~~L~L~~~~i~~l 491 (909)
.+... +..+..+++|++|+++++. +...+....+.+++.+.. .++..+..++. ....++.|++++|.+..+
T Consensus 90 ~l~~~~~~~~~~l~~L~~l~l~~~~-l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~l~~i 168 (242)
T d1xwdc1 90 NLLYINPEAFQNLPNLQYLLISNTG-IKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEI 168 (242)
T ss_dssp TCCEECTTSEECCTTCCEEEEESCC-CCSCCCCTTTCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEE
T ss_pred cccccccccccccccccccccchhh-hcccccccccccccccccccccccccccccccccccccccceeeeccccccccc
Confidence 55444 4567899999999999964 656655444555554432 23334444432 234567788888888888
Q ss_pred CcccccCCCCCEEeccCCCCCCcCccc-ccCCCCCCeeec
Q 039311 492 PSSIERLSSLILLNLGNCLRLEGLPSK-ICKLKSLERLNL 530 (909)
Q Consensus 492 p~~i~~l~~L~~L~L~~c~~l~~lp~~-l~~L~~L~~L~l 530 (909)
+..+....++..+....+..++.+|.. +.++++|+.|++
T Consensus 169 ~~~~~~~~~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~L 208 (242)
T d1xwdc1 169 HNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDI 208 (242)
T ss_dssp CTTTTTTCCEEEEECTTCTTCCCCCTTTTTTSCCCSEEEC
T ss_pred ccccccchhhhccccccccccccccHHHhcCCCCCCEEEC
Confidence 877777777776665555566666653 567777777766
No 15
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.47 E-value=3e-13 Score=137.33 Aligned_cols=183 Identities=18% Similarity=0.256 Sum_probs=89.3
Q ss_pred CCccEEEeeCCCCCccCCCCCCCCeeEEEcCCCCccccccccccCCCCCEEecCCCcCCCcCCCCCcccccccccccccc
Q 039311 340 TELRYLQWHGCPLKSLSSKIPPENLVSLEMPHSSIKQLWKGVQRLVNLKHINLSHSEHLTKIPDLSLATNLESLNFQGCT 419 (909)
Q Consensus 340 ~~Lr~L~l~~~~l~~lp~~~~~~~L~~L~L~~~~i~~lp~~~~~L~~L~~L~Ls~~~~l~~~p~l~~l~~L~~L~L~~c~ 419 (909)
.+|++|.+.++.++++++.-.+++|++|++++|.+..++. +..+++|+++++++|.. +.++.+..+++|+++++++|.
T Consensus 41 ~~L~~L~l~~~~i~~l~~l~~l~~L~~L~ls~n~i~~~~~-l~~l~~l~~l~~~~n~~-~~i~~l~~l~~L~~l~l~~~~ 118 (227)
T d1h6ua2 41 DGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITDLAP-LKNLTKITELELSGNPL-KNVSAIAGLQSIKTLDLTSTQ 118 (227)
T ss_dssp HTCCEEECTTSCCCCCTTGGGCTTCCEEECCSSCCCCCGG-GTTCCSCCEEECCSCCC-SCCGGGTTCTTCCEEECTTSC
T ss_pred CCcCEEECCCCCCCcchhHhcCCCCcEeecCCceeecccc-ccccccccccccccccc-ccccccccccccccccccccc
Confidence 3455566666666666433355666666666666665543 56666666666666542 344555566666666666554
Q ss_pred ccceecccccCCCcccEeccccccCccccCccccCCcCcEEEccCCCCCcccC-ccccCcceeeccccCccccCcccccC
Q 039311 420 CLLETHSSIQYLNKLVVLNLKHCRSLTSLSTSIHLGSLKKLILSGCSNLMSFP-ELSCNIEELSLDGTAIQEFPSSIERL 498 (909)
Q Consensus 420 ~l~~~p~~i~~L~~L~~L~L~~c~~l~~lp~~~~l~~L~~L~Ls~c~~l~~lp-~~~~~L~~L~L~~~~i~~lp~~i~~l 498 (909)
... ...+...+.++.+.++++. +.......++++|+.|++++|......+ ..+.+|++|++++|.++.+|. ++++
T Consensus 119 ~~~--~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~L~~L~l~~n~~~~~~~l~~l~~L~~L~Ls~n~l~~l~~-l~~l 194 (227)
T d1h6ua2 119 ITD--VTPLAGLSNLQVLYLDLNQ-ITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISP-LASL 194 (227)
T ss_dssp CCC--CGGGTTCTTCCEEECCSSC-CCCCGGGGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCGG-GGGC
T ss_pred ccc--cchhccccchhhhhchhhh-hchhhhhccccccccccccccccccchhhcccccceecccCCCccCCChh-hcCC
Confidence 322 1234445555555555533 2222233345555555555543221111 112334444444444444432 4445
Q ss_pred CCCCEEeccCCCCCCcCcccccCCCCCCeeec
Q 039311 499 SSLILLNLGNCLRLEGLPSKICKLKSLERLNL 530 (909)
Q Consensus 499 ~~L~~L~L~~c~~l~~lp~~l~~L~~L~~L~l 530 (909)
++|++|+|++|+ +..++. ++++++|+.|++
T Consensus 195 ~~L~~L~Ls~N~-lt~i~~-l~~l~~L~~L~l 224 (227)
T d1h6ua2 195 PNLIEVHLKNNQ-ISDVSP-LANTSNLFIVTL 224 (227)
T ss_dssp TTCCEEECTTSC-CCBCGG-GTTCTTCCEEEE
T ss_pred CCCCEEECcCCc-CCCCcc-cccCCCCCEEEe
Confidence 555555555542 333332 444444444443
No 16
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.47 E-value=1.2e-13 Score=140.45 Aligned_cols=200 Identities=19% Similarity=0.246 Sum_probs=110.0
Q ss_pred eeCCCCCccCCCCCCCCeeEEEcCCCCccccccccccCCCCCEEecCCCcCCCcCCCCCccccccccccccccccceecc
Q 039311 347 WHGCPLKSLSSKIPPENLVSLEMPHSSIKQLWKGVQRLVNLKHINLSHSEHLTKIPDLSLATNLESLNFQGCTCLLETHS 426 (909)
Q Consensus 347 l~~~~l~~lp~~~~~~~L~~L~L~~~~i~~lp~~~~~L~~L~~L~Ls~~~~l~~~p~l~~l~~L~~L~L~~c~~l~~~p~ 426 (909)
+..+.+..+.....+.+|+.|++.+++|+.+ +++.++++|++|++++|.+. .++.+..+++|+++++++|.. ..++
T Consensus 26 l~~~~~~d~~~~~~l~~L~~L~l~~~~i~~l-~~l~~l~~L~~L~ls~n~i~-~~~~l~~l~~l~~l~~~~n~~-~~i~- 101 (227)
T d1h6ua2 26 AGKSNVTDTVTQADLDGITTLSAFGTGVTTI-EGVQYLNNLIGLELKDNQIT-DLAPLKNLTKITELELSGNPL-KNVS- 101 (227)
T ss_dssp TTCSSTTSEECHHHHHTCCEEECTTSCCCCC-TTGGGCTTCCEEECCSSCCC-CCGGGTTCCSCCEEECCSCCC-SCCG-
T ss_pred hCCCCcCCcCCHHHcCCcCEEECCCCCCCcc-hhHhcCCCCcEeecCCceee-ccccccccccccccccccccc-cccc-
Confidence 3344444443333556788888888888887 46788888888888887644 344477777888888777643 2333
Q ss_pred cccCCCcccEeccccccCccccCccccCCcCcEEEccCCCCCcccCccccCcceeeccccCccccCcccccCCCCCEEec
Q 039311 427 SIQYLNKLVVLNLKHCRSLTSLSTSIHLGSLKKLILSGCSNLMSFPELSCNIEELSLDGTAIQEFPSSIERLSSLILLNL 506 (909)
Q Consensus 427 ~i~~L~~L~~L~L~~c~~l~~lp~~~~l~~L~~L~Ls~c~~l~~lp~~~~~L~~L~L~~~~i~~lp~~i~~l~~L~~L~L 506 (909)
.+..+++|+++++++|. ...++.....+.++.+.+++|.... .+ .+...++|+.|++
T Consensus 102 ~l~~l~~L~~l~l~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~---------------------~~-~~~~~~~L~~L~l 158 (227)
T d1h6ua2 102 AIAGLQSIKTLDLTSTQ-ITDVTPLAGLSNLQVLYLDLNQITN---------------------IS-PLAGLTNLQYLSI 158 (227)
T ss_dssp GGTTCTTCCEEECTTSC-CCCCGGGTTCTTCCEEECCSSCCCC---------------------CG-GGGGCTTCCEEEC
T ss_pred ccccccccccccccccc-ccccchhccccchhhhhchhhhhch---------------------hh-hhccccccccccc
Confidence 46677777777777654 2333333345666666665543322 11 2334444555555
Q ss_pred cCCCCCCcCcccccCCCCCCeeecccccccccccCcceeecCccccccCCCCeeecCccccccccccccCccCCCCCCCE
Q 039311 507 GNCLRLEGLPSKICKLKSLERLNLAEALKELKAEGIAIREVPSSIACLKNLGRLSFESFMCHEQMGLLLPISFGLTSLTY 586 (909)
Q Consensus 507 ~~c~~l~~lp~~l~~L~~L~~L~l~~~l~~L~l~~~~~~~lp~~i~~l~~L~~L~l~~~~~~~~~~~~~~~~~~l~~L~~ 586 (909)
++|.... .+ .++++++|+.|++ +++.++.++. +..+++|++|++++|. +. .++.+.++++|+.
T Consensus 159 ~~n~~~~-~~-~l~~l~~L~~L~L---------s~n~l~~l~~-l~~l~~L~~L~Ls~N~---lt--~i~~l~~l~~L~~ 221 (227)
T d1h6ua2 159 GNAQVSD-LT-PLANLSKLTTLKA---------DDNKISDISP-LASLPNLIEVHLKNNQ---IS--DVSPLANTSNLFI 221 (227)
T ss_dssp CSSCCCC-CG-GGTTCTTCCEEEC---------CSSCCCCCGG-GGGCTTCCEEECTTSC---CC--BCGGGTTCTTCCE
T ss_pred ccccccc-ch-hhcccccceeccc---------CCCccCCChh-hcCCCCCCEEECcCCc---CC--CCcccccCCCCCE
Confidence 5443221 11 1444455544444 2233333332 4555566666665522 22 1233555666666
Q ss_pred EecC
Q 039311 587 LRLT 590 (909)
Q Consensus 587 L~Ls 590 (909)
|+|+
T Consensus 222 L~ls 225 (227)
T d1h6ua2 222 VTLT 225 (227)
T ss_dssp EEEE
T ss_pred EEee
Confidence 6664
No 17
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.44 E-value=4.4e-13 Score=133.03 Aligned_cols=160 Identities=20% Similarity=0.294 Sum_probs=82.0
Q ss_pred CCccEEEeeCCCCCccCCCCCCCCeeEEEcCCCCccccccccccCCCCCEEecCCCcCCCcCCCCCcccccccccccccc
Q 039311 340 TELRYLQWHGCPLKSLSSKIPPENLVSLEMPHSSIKQLWKGVQRLVNLKHINLSHSEHLTKIPDLSLATNLESLNFQGCT 419 (909)
Q Consensus 340 ~~Lr~L~l~~~~l~~lp~~~~~~~L~~L~L~~~~i~~lp~~~~~L~~L~~L~Ls~~~~l~~~p~l~~l~~L~~L~L~~c~ 419 (909)
.++++|+++++.++++++.-.+++|++|++++|.++.++. ++++++|++|++++|.. ..++.++++++|++|++++|.
T Consensus 40 ~~l~~L~l~~~~i~~l~~l~~l~nL~~L~Ls~N~l~~~~~-l~~l~~L~~L~l~~n~~-~~~~~l~~l~~L~~L~l~~~~ 117 (199)
T d2omxa2 40 DQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITP-LKNLTKLVDILMNNNQI-ADITPLANLTNLTGLTLFNNQ 117 (199)
T ss_dssp TTCCEEECTTSCCCCCTTGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCC-CCCGGGTTCTTCSEEECCSSC
T ss_pred cCCCEEECCCCCCCCccccccCCCcCcCccccccccCccc-ccCCccccccccccccc-ccccccccccccccccccccc
Confidence 3455555555555555433345556666666665555543 55566666666655542 233345555555555555543
Q ss_pred ccceecccccCCCcccEeccccccCccccCccccCCcCcEEEccCCCCCcccCccccCcceeeccccCccccCcccccCC
Q 039311 420 CLLETHSSIQYLNKLVVLNLKHCRSLTSLSTSIHLGSLKKLILSGCSNLMSFPELSCNIEELSLDGTAIQEFPSSIERLS 499 (909)
Q Consensus 420 ~l~~~p~~i~~L~~L~~L~L~~c~~l~~lp~~~~l~~L~~L~Ls~c~~l~~lp~~~~~L~~L~L~~~~i~~lp~~i~~l~ 499 (909)
... ...+..+++|+.|++++|. +..++....+++|+. |++.+|.++.++ .+++++
T Consensus 118 ~~~--~~~~~~l~~L~~L~l~~n~-l~~~~~l~~~~~L~~---------------------L~l~~n~l~~l~-~l~~l~ 172 (199)
T d2omxa2 118 ITD--IDPLKNLTNLNRLELSSNT-ISDISALSGLTSLQQ---------------------LNFSSNQVTDLK-PLANLT 172 (199)
T ss_dssp CCC--CGGGTTCTTCSEEECCSSC-CCCCGGGTTCTTCSE---------------------EECCSSCCCCCG-GGTTCT
T ss_pred ccc--ccccchhhhhHHhhhhhhh-hcccccccccccccc---------------------cccccccccCCc-cccCCC
Confidence 322 1224445555555555432 333333223444444 444445555554 366777
Q ss_pred CCCEEeccCCCCCCcCcccccCCCCCCee
Q 039311 500 SLILLNLGNCLRLEGLPSKICKLKSLERL 528 (909)
Q Consensus 500 ~L~~L~L~~c~~l~~lp~~l~~L~~L~~L 528 (909)
+|+.|++++|+ +..++ .++++++|+.|
T Consensus 173 ~L~~L~ls~N~-i~~i~-~l~~L~~L~~L 199 (199)
T d2omxa2 173 TLERLDISSNK-VSDIS-VLAKLTNLESL 199 (199)
T ss_dssp TCCEEECCSSC-CCCCG-GGGGCTTCSEE
T ss_pred CCCEEECCCCC-CCCCc-cccCCCCCCcC
Confidence 77777777774 44444 35666666654
No 18
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.43 E-value=3.8e-13 Score=134.68 Aligned_cols=162 Identities=20% Similarity=0.243 Sum_probs=93.2
Q ss_pred CccEEEeeCCCCCccCCCCCCCCeeEEEcCCCCccccccccccCCCCCEEecCCCcCCCcCCCCCccccccccccccccc
Q 039311 341 ELRYLQWHGCPLKSLSSKIPPENLVSLEMPHSSIKQLWKGVQRLVNLKHINLSHSEHLTKIPDLSLATNLESLNFQGCTC 420 (909)
Q Consensus 341 ~Lr~L~l~~~~l~~lp~~~~~~~L~~L~L~~~~i~~lp~~~~~L~~L~~L~Ls~~~~l~~~p~l~~l~~L~~L~L~~c~~ 420 (909)
.|++|+++++.++.+++.-.+.+|++|++++|.++.++. +..+++|++|++++|++ +.+|.+..+++|+.|++++|..
T Consensus 47 ~L~~L~l~~~~i~~l~~l~~l~~L~~L~L~~n~i~~l~~-~~~l~~L~~L~l~~n~i-~~l~~l~~l~~L~~L~l~~~~~ 124 (210)
T d1h6ta2 47 SIDQIIANNSDIKSVQGIQYLPNVTKLFLNGNKLTDIKP-LANLKNLGWLFLDENKV-KDLSSLKDLKKLKSLSLEHNGI 124 (210)
T ss_dssp TCCEEECTTSCCCCCTTGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCC-CCGGGGTTCTTCCEEECTTSCC
T ss_pred CccEEECcCCCCCCchhHhhCCCCCEEeCCCccccCccc-cccCccccccccccccc-cccccccccccccccccccccc
Confidence 455666666666665543355666666666666666553 45666666666666653 3445566666666666666543
Q ss_pred cceecccccCCCcccEeccccccCccccCccccCCcCcEEEccCCCCCcccCccccCcceeeccccCccccCcccccCCC
Q 039311 421 LLETHSSIQYLNKLVVLNLKHCRSLTSLSTSIHLGSLKKLILSGCSNLMSFPELSCNIEELSLDGTAIQEFPSSIERLSS 500 (909)
Q Consensus 421 l~~~p~~i~~L~~L~~L~L~~c~~l~~lp~~~~l~~L~~L~Ls~c~~l~~lp~~~~~L~~L~L~~~~i~~lp~~i~~l~~ 500 (909)
. . ...+..+++|+.+++++|. +...+....+++|+.+++++ |.+..++. +.++++
T Consensus 125 ~-~-~~~l~~l~~l~~l~~~~n~-l~~~~~~~~l~~L~~l~l~~---------------------n~l~~i~~-l~~l~~ 179 (210)
T d1h6ta2 125 S-D-INGLVHLPQLESLYLGNNK-ITDITVLSRLTKLDTLSLED---------------------NQISDIVP-LAGLTK 179 (210)
T ss_dssp C-C-CGGGGGCTTCCEEECCSSC-CCCCGGGGGCTTCSEEECCS---------------------SCCCCCGG-GTTCTT
T ss_pred c-c-ccccccccccccccccccc-cccccccccccccccccccc---------------------cccccccc-ccCCCC
Confidence 2 1 2245555666666665532 33333333455555555544 44444442 666777
Q ss_pred CCEEeccCCCCCCcCcccccCCCCCCeeecc
Q 039311 501 LILLNLGNCLRLEGLPSKICKLKSLERLNLA 531 (909)
Q Consensus 501 L~~L~L~~c~~l~~lp~~l~~L~~L~~L~l~ 531 (909)
|+.|++++|. +..+| .+..+++|+.|+++
T Consensus 180 L~~L~Ls~N~-i~~l~-~l~~l~~L~~L~Ls 208 (210)
T d1h6ta2 180 LQNLYLSKNH-ISDLR-ALAGLKNLDVLELF 208 (210)
T ss_dssp CCEEECCSSC-CCBCG-GGTTCTTCSEEEEE
T ss_pred CCEEECCCCC-CCCCh-hhcCCCCCCEEEcc
Confidence 7777777774 44555 47777777777763
No 19
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.42 E-value=5.5e-13 Score=133.51 Aligned_cols=124 Identities=24% Similarity=0.277 Sum_probs=78.7
Q ss_pred cccCCCCCEEeccCCCCCCcCcccccCCCCCCeeecccccccccccCcceeecCccccccCCCCeeecCccccccccccc
Q 039311 495 IERLSSLILLNLGNCLRLEGLPSKICKLKSLERLNLAEALKELKAEGIAIREVPSSIACLKNLGRLSFESFMCHEQMGLL 574 (909)
Q Consensus 495 i~~l~~L~~L~L~~c~~l~~lp~~l~~L~~L~~L~l~~~l~~L~l~~~~~~~lp~~i~~l~~L~~L~l~~~~~~~~~~~~ 574 (909)
++.+++|+.|++++|. +..+| .+..+++|+.|++. ++.+..++ .+..+++|+.++++++.. . .
T Consensus 86 ~~~l~~L~~L~l~~n~-i~~l~-~l~~l~~L~~L~l~---------~~~~~~~~-~l~~l~~l~~l~~~~n~l---~--~ 148 (210)
T d1h6ta2 86 LANLKNLGWLFLDENK-VKDLS-SLKDLKKLKSLSLE---------HNGISDIN-GLVHLPQLESLYLGNNKI---T--D 148 (210)
T ss_dssp GTTCTTCCEEECCSSC-CCCGG-GGTTCTTCCEEECT---------TSCCCCCG-GGGGCTTCCEEECCSSCC---C--C
T ss_pred cccCcccccccccccc-ccccc-cccccccccccccc---------cccccccc-cccccccccccccccccc---c--c
Confidence 4455555555555553 23333 24555555555542 22222222 355566666666665222 1 1
Q ss_pred cCccCCCCCCCEEecCCCCCCCcccccCCCCCCcEEECCCCCCeecchhhccCCCCCEEeecC
Q 039311 575 LPISFGLTSLTYLRLTDCGIIELPECLGQLSSRSILLLEKNNFERIPESIIQLSHLFSLGISH 637 (909)
Q Consensus 575 ~~~~~~l~~L~~L~Ls~~~l~~lp~~l~~l~~L~~L~L~~n~l~~lp~~i~~l~~L~~L~L~~ 637 (909)
.+....+++|+.+++++|.+.+++. +.++++|+.|+|++|+++.+| .+..+++|+.|+|++
T Consensus 149 ~~~~~~l~~L~~l~l~~n~l~~i~~-l~~l~~L~~L~Ls~N~i~~l~-~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 149 ITVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHISDLR-ALAGLKNLDVLELFS 209 (210)
T ss_dssp CGGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCBCG-GGTTCTTCSEEEEEE
T ss_pred ccccccccccccccccccccccccc-ccCCCCCCEEECCCCCCCCCh-hhcCCCCCCEEEccC
Confidence 2334557888888888888887754 788899999999999888887 588888999998864
No 20
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.42 E-value=7.3e-14 Score=147.05 Aligned_cols=85 Identities=25% Similarity=0.341 Sum_probs=39.6
Q ss_pred cCCCCCEEecCCCcCCCcC-CC-CCccccccccccccccccceecccccCCCcccEeccccccCcccc--Cccc-cCCcC
Q 039311 383 RLVNLKHINLSHSEHLTKI-PD-LSLATNLESLNFQGCTCLLETHSSIQYLNKLVVLNLKHCRSLTSL--STSI-HLGSL 457 (909)
Q Consensus 383 ~L~~L~~L~Ls~~~~l~~~-p~-l~~l~~L~~L~L~~c~~l~~~p~~i~~L~~L~~L~L~~c~~l~~l--p~~~-~l~~L 457 (909)
...+|++||+++|.+.... +. +..+++|++|++++|......+..++.+++|++|++++|..++.- .... ++++|
T Consensus 44 ~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L 123 (284)
T d2astb2 44 SPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRL 123 (284)
T ss_dssp CCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTC
T ss_pred cCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhc
Confidence 3445555555554432221 11 344555555555555444444445555555555555555544321 1111 24555
Q ss_pred cEEEccCCCC
Q 039311 458 KKLILSGCSN 467 (909)
Q Consensus 458 ~~L~Ls~c~~ 467 (909)
++|++++|..
T Consensus 124 ~~L~ls~c~~ 133 (284)
T d2astb2 124 DELNLSWCFD 133 (284)
T ss_dssp CEEECCCCTT
T ss_pred cccccccccc
Confidence 5555555443
No 21
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.41 E-value=1.6e-12 Score=133.13 Aligned_cols=99 Identities=14% Similarity=0.151 Sum_probs=63.9
Q ss_pred eEEEcCCCCccccccccccCCCCCEEecCCCcCCCcCCC-CCccccccccccccccccceecc-cccCCCcccEeccccc
Q 039311 365 VSLEMPHSSIKQLWKGVQRLVNLKHINLSHSEHLTKIPD-LSLATNLESLNFQGCTCLLETHS-SIQYLNKLVVLNLKHC 442 (909)
Q Consensus 365 ~~L~L~~~~i~~lp~~~~~L~~L~~L~Ls~~~~l~~~p~-l~~l~~L~~L~L~~c~~l~~~p~-~i~~L~~L~~L~L~~c 442 (909)
+.++.++.+++.+|.++. .++++|++++|.+....+. |.++++|++|++++|.....++. .+..+++++++.+..+
T Consensus 11 ~~i~c~~~~l~~iP~~l~--~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~ 88 (242)
T d1xwdc1 11 RVFLCQESKVTEIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 88 (242)
T ss_dssp SEEEEESCSCSSCCSCSC--SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECC
T ss_pred CEEEEeCCCCCCcCCCCC--CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeecccccccccccccccccc
Confidence 466777777888887653 5788888888875443333 67788888888887766555543 4566777777776665
Q ss_pred cCccccCccc--cCCcCcEEEccCC
Q 039311 443 RSLTSLSTSI--HLGSLKKLILSGC 465 (909)
Q Consensus 443 ~~l~~lp~~~--~l~~L~~L~Ls~c 465 (909)
..+..++... ++++|+.|++++|
T Consensus 89 n~l~~~~~~~~~~l~~L~~l~l~~~ 113 (242)
T d1xwdc1 89 NNLLYINPEAFQNLPNLQYLLISNT 113 (242)
T ss_dssp TTCCEECTTSEECCTTCCEEEEESC
T ss_pred ccccccccccccccccccccccchh
Confidence 5555554432 3555555555553
No 22
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.40 E-value=1.5e-12 Score=129.14 Aligned_cols=54 Identities=30% Similarity=0.366 Sum_probs=29.7
Q ss_pred cCCCCCCCEEecCCCCCCCcccccCCCCCCcEEECCCCCCeecchhhccCCCCCEE
Q 039311 578 SFGLTSLTYLRLTDCGIIELPECLGQLSSRSILLLEKNNFERIPESIIQLSHLFSL 633 (909)
Q Consensus 578 ~~~l~~L~~L~Ls~~~l~~lp~~l~~l~~L~~L~L~~n~l~~lp~~i~~l~~L~~L 633 (909)
+..+++|+.|++.+|.+.+++ .++++++|+.|++++|+++.++ .+..+++|++|
T Consensus 146 l~~~~~L~~L~l~~n~l~~l~-~l~~l~~L~~L~ls~N~i~~i~-~l~~L~~L~~L 199 (199)
T d2omxa2 146 LSGLTSLQQLNFSSNQVTDLK-PLANLTTLERLDISSNKVSDIS-VLAKLTNLESL 199 (199)
T ss_dssp GTTCTTCSEEECCSSCCCCCG-GGTTCTTCCEEECCSSCCCCCG-GGGGCTTCSEE
T ss_pred ccccccccccccccccccCCc-cccCCCCCCEEECCCCCCCCCc-cccCCCCCCcC
Confidence 444555556666555555543 2555566666666666555554 34555555544
No 23
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.34 E-value=2e-13 Score=143.58 Aligned_cols=129 Identities=19% Similarity=0.254 Sum_probs=75.7
Q ss_pred eEEEcCCCCccccccccccC--CCCCEEecCCCcCCCcCCCCCccccccccccccccccce-ecccccCCCcccEecccc
Q 039311 365 VSLEMPHSSIKQLWKGVQRL--VNLKHINLSHSEHLTKIPDLSLATNLESLNFQGCTCLLE-THSSIQYLNKLVVLNLKH 441 (909)
Q Consensus 365 ~~L~L~~~~i~~lp~~~~~L--~~L~~L~Ls~~~~l~~~p~l~~l~~L~~L~L~~c~~l~~-~p~~i~~L~~L~~L~L~~ 441 (909)
+.||++++.+. |..+.++ ..+..+.++.+.............+|++|++++|..... +...+..+++|++|++++
T Consensus 3 ~~lDLs~~~l~--~~~l~~l~~~~~~~lrl~~~~~~~~~~~~~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~ 80 (284)
T d2astb2 3 QTLDLTGKNLH--PDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEG 80 (284)
T ss_dssp SEEECTTCBCC--HHHHHHHHHTTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTT
T ss_pred CEEECCCCCCC--chHHHHHHhccceEeeccccccccchhhhccCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccc
Confidence 35677766553 1111111 234566666554333333345667899999998865543 344567888899999988
Q ss_pred ccCccccCccc-cCCcCcEEEccCCCCCcccCccccCcceeeccccCccccCcccccCCCCCEEeccCCCCCC
Q 039311 442 CRSLTSLSTSI-HLGSLKKLILSGCSNLMSFPELSCNIEELSLDGTAIQEFPSSIERLSSLILLNLGNCLRLE 513 (909)
Q Consensus 442 c~~l~~lp~~~-~l~~L~~L~Ls~c~~l~~lp~~~~~L~~L~L~~~~i~~lp~~i~~l~~L~~L~L~~c~~l~ 513 (909)
|..-...+..+ .+++|++|++++|..++.. .+..-+.++++|++|++++|....
T Consensus 81 ~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~------------------~l~~l~~~~~~L~~L~ls~c~~~~ 135 (284)
T d2astb2 81 LRLSDPIVNTLAKNSNLVRLNLSGCSGFSEF------------------ALQTLLSSCSRLDELNLSWCFDFT 135 (284)
T ss_dssp CBCCHHHHHHHTTCTTCSEEECTTCBSCCHH------------------HHHHHHHHCTTCCEEECCCCTTCC
T ss_pred cCCCcHHHHHHhcCCCCcCcccccccccccc------------------ccchhhHHHHhccccccccccccc
Confidence 75322222222 4778888888887654321 122223467788888888875543
No 24
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.13 E-value=5.3e-11 Score=107.59 Aligned_cols=100 Identities=17% Similarity=0.160 Sum_probs=80.0
Q ss_pred cEEEeeCCCCCccCCCCCCCCeeEEEcCCCCccccccccccCCCCCEEecCCCcCCCcCCCCCccccccccccccccccc
Q 039311 343 RYLQWHGCPLKSLSSKIPPENLVSLEMPHSSIKQLWKGVQRLVNLKHINLSHSEHLTKIPDLSLATNLESLNFQGCTCLL 422 (909)
Q Consensus 343 r~L~l~~~~l~~lp~~~~~~~L~~L~L~~~~i~~lp~~~~~L~~L~~L~Ls~~~~l~~~p~l~~l~~L~~L~L~~c~~l~ 422 (909)
|+|++++|.++.+|..-.+.+|++|++++|.|+.+|.++..+++|++|++++|.+ +.+|++..+++|++|++++|....
T Consensus 1 R~L~Ls~n~l~~l~~l~~l~~L~~L~ls~N~l~~lp~~~~~l~~L~~L~l~~N~i-~~l~~~~~l~~L~~L~l~~N~i~~ 79 (124)
T d1dcea3 1 RVLHLAHKDLTVLCHLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNAL-ENVDGVANLPRLQELLLCNNRLQQ 79 (124)
T ss_dssp SEEECTTSCCSSCCCGGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCC-CCCGGGTTCSSCCEEECCSSCCCS
T ss_pred CEEEcCCCCCCCCcccccCCCCCEEECCCCccCcchhhhhhhhcccccccccccc-cccCccccccccCeEECCCCccCC
Confidence 6788899999888865578899999999999999988888899999999998874 456778888889999998876432
Q ss_pred ee-cccccCCCcccEecccccc
Q 039311 423 ET-HSSIQYLNKLVVLNLKHCR 443 (909)
Q Consensus 423 ~~-p~~i~~L~~L~~L~L~~c~ 443 (909)
.. ...++.+++|++|++++|.
T Consensus 80 ~~~~~~l~~~~~L~~L~l~~N~ 101 (124)
T d1dcea3 80 SAAIQPLVSCPRLVLLNLQGNS 101 (124)
T ss_dssp SSTTGGGGGCTTCCEEECTTSG
T ss_pred CCCchhhcCCCCCCEEECCCCc
Confidence 21 2457788888888888854
No 25
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.13 E-value=7.1e-11 Score=115.99 Aligned_cols=124 Identities=19% Similarity=0.207 Sum_probs=101.1
Q ss_pred cEEEeeCCCCCccCCCCCCCCeeEEEcCCCCccc-cc-cccccCCCCCEEecCCCcCCCcCCC-CCcccccccccccccc
Q 039311 343 RYLQWHGCPLKSLSSKIPPENLVSLEMPHSSIKQ-LW-KGVQRLVNLKHINLSHSEHLTKIPD-LSLATNLESLNFQGCT 419 (909)
Q Consensus 343 r~L~l~~~~l~~lp~~~~~~~L~~L~L~~~~i~~-lp-~~~~~L~~L~~L~Ls~~~~l~~~p~-l~~l~~L~~L~L~~c~ 419 (909)
+.++.+++.++++|..++ .++++|+|++|.|.. ++ ..+..+++|+.|+|++|.+....+. +..+++|++|++++|.
T Consensus 11 ~~v~Cs~~~L~~iP~~lp-~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~ 89 (192)
T d1w8aa_ 11 TTVDCTGRGLKEIPRDIP-LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENK 89 (192)
T ss_dssp TEEECTTSCCSSCCSCCC-TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCC
T ss_pred CEEEEeCCCcCccCCCCC-CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeecccc
Confidence 467888889999998875 689999999999975 43 4568899999999999988777765 8889999999999987
Q ss_pred ccceecccccCCCcccEeccccccCccccCccc--cCCcCcEEEccCCCCC
Q 039311 420 CLLETHSSIQYLNKLVVLNLKHCRSLTSLSTSI--HLGSLKKLILSGCSNL 468 (909)
Q Consensus 420 ~l~~~p~~i~~L~~L~~L~L~~c~~l~~lp~~~--~l~~L~~L~Ls~c~~l 468 (909)
...-.+..+..+++|++|+|++| .++.+|... ++++|++|+|+++...
T Consensus 90 l~~l~~~~F~~l~~L~~L~L~~N-~l~~i~~~~f~~l~~L~~l~L~~N~~~ 139 (192)
T d1w8aa_ 90 IKEISNKMFLGLHQLKTLNLYDN-QISCVMPGSFEHLNSLTSLNLASNPFN 139 (192)
T ss_dssp CCEECSSSSTTCTTCCEEECCSS-CCCEECTTSSTTCTTCCEEECTTCCBC
T ss_pred ccccCHHHHhCCCcccccccCCc-cccccCHHHhcCCcccccccccccccc
Confidence 55444567889999999999996 477776654 5889999999887543
No 26
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.10 E-value=3.2e-11 Score=114.69 Aligned_cols=81 Identities=19% Similarity=0.117 Sum_probs=43.9
Q ss_pred CCCCeeEEEcCCCCccccccccccCCCCCEEecCCCcCCCcCCCCCccccccccccccccccceeccc-ccCCCcccEec
Q 039311 360 PPENLVSLEMPHSSIKQLWKGVQRLVNLKHINLSHSEHLTKIPDLSLATNLESLNFQGCTCLLETHSS-IQYLNKLVVLN 438 (909)
Q Consensus 360 ~~~~L~~L~L~~~~i~~lp~~~~~L~~L~~L~Ls~~~~l~~~p~l~~l~~L~~L~L~~c~~l~~~p~~-i~~L~~L~~L~ 438 (909)
++.+|++|+|++|+|+.++.....+++|++|+|++|.+ ..++.++.+++|++|++++|.. ..++.. +..+++|++|+
T Consensus 16 n~~~lr~L~L~~n~I~~i~~~~~~l~~L~~L~Ls~N~i-~~l~~~~~l~~L~~L~ls~N~i-~~l~~~~~~~l~~L~~L~ 93 (162)
T d1a9na_ 16 NAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEI-RKLDGFPLLRRLKTLLVNNNRI-CRIGEGLDQALPDLTELI 93 (162)
T ss_dssp CTTSCEEEECTTSCCCSCCCGGGGTTCCSEEECCSSCC-CEECCCCCCSSCCEEECCSSCC-CEECSCHHHHCTTCCEEE
T ss_pred CcCcCcEEECCCCCCCccCccccccccCCEEECCCCCC-CccCCcccCcchhhhhcccccc-cCCCccccccccccccce
Confidence 44455556666666655554444556666666666543 3345555566666666666543 333332 34566666666
Q ss_pred cccc
Q 039311 439 LKHC 442 (909)
Q Consensus 439 L~~c 442 (909)
+++|
T Consensus 94 L~~N 97 (162)
T d1a9na_ 94 LTNN 97 (162)
T ss_dssp CCSC
T ss_pred eccc
Confidence 6664
No 27
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.07 E-value=8.1e-11 Score=111.86 Aligned_cols=121 Identities=15% Similarity=0.165 Sum_probs=81.3
Q ss_pred CCCccEEEeeCCCCCccCCCC-CCCCeeEEEcCCCCccccccccccCCCCCEEecCCCcCCCcCCC-CCccccccccccc
Q 039311 339 STELRYLQWHGCPLKSLSSKI-PPENLVSLEMPHSSIKQLWKGVQRLVNLKHINLSHSEHLTKIPD-LSLATNLESLNFQ 416 (909)
Q Consensus 339 ~~~Lr~L~l~~~~l~~lp~~~-~~~~L~~L~L~~~~i~~lp~~~~~L~~L~~L~Ls~~~~l~~~p~-l~~l~~L~~L~L~ 416 (909)
+.++|.|++++|.++.+|..+ .+.+|++|++++|.|..++ ++..+++|++|++++|.+....+. +..+++|++|+++
T Consensus 17 ~~~lr~L~L~~n~I~~i~~~~~~l~~L~~L~Ls~N~i~~l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~~L~L~ 95 (162)
T d1a9na_ 17 AVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILT 95 (162)
T ss_dssp TTSCEEEECTTSCCCSCCCGGGGTTCCSEEECCSSCCCEEC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECC
T ss_pred cCcCcEEECCCCCCCccCccccccccCCEEECCCCCCCccC-CcccCcchhhhhcccccccCCCccccccccccccceec
Confidence 446777777777777777654 5677888888888877773 577777888888888775554444 4567788888888
Q ss_pred cccccceec--ccccCCCcccEeccccccCccccCcc----c-cCCcCcEEEc
Q 039311 417 GCTCLLETH--SSIQYLNKLVVLNLKHCRSLTSLSTS----I-HLGSLKKLIL 462 (909)
Q Consensus 417 ~c~~l~~~p--~~i~~L~~L~~L~L~~c~~l~~lp~~----~-~l~~L~~L~L 462 (909)
+|... .++ ..+..+++|++|++++|. +...|.. + .+++|++|+-
T Consensus 96 ~N~i~-~~~~l~~l~~l~~L~~L~l~~N~-i~~~~~~r~~~i~~lp~L~~LD~ 146 (162)
T d1a9na_ 96 NNSLV-ELGDLDPLASLKSLTYLCILRNP-VTNKKHYRLYVIYKVPQVRVLDF 146 (162)
T ss_dssp SCCCC-CGGGGGGGGGCTTCCEEECCSSG-GGGSTTHHHHHHHHCTTCSEETT
T ss_pred ccccc-ccccccccccccccchhhcCCCc-cccccchHHHHHHHCCCcCeeCC
Confidence 76542 222 356677788888888764 4555431 2 4677777653
No 28
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.03 E-value=1.9e-11 Score=137.02 Aligned_cols=58 Identities=19% Similarity=0.225 Sum_probs=34.6
Q ss_pred CCCCCEEecCCCCCCC-----cccccC-CCCCCcEEECCCCCCe-----ecchhhccCCCCCEEeecCC
Q 039311 581 LTSLTYLRLTDCGIIE-----LPECLG-QLSSRSILLLEKNNFE-----RIPESIIQLSHLFSLGISHC 638 (909)
Q Consensus 581 l~~L~~L~Ls~~~l~~-----lp~~l~-~l~~L~~L~L~~n~l~-----~lp~~i~~l~~L~~L~L~~c 638 (909)
.++|++|+|++|.+.+ ++..+. ..+.|+.|+|++|+++ .++..+..+++|++|+|++|
T Consensus 339 ~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~N 407 (460)
T d1z7xw1 339 NRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNN 407 (460)
T ss_dssp CSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSS
T ss_pred ccchhhhheeeecccCcccchhhhhhhcccCCCCEEECCCCCCChHHHHHHHHHHhcCCCCCEEECCCC
Confidence 4567777777766542 333443 3456777777777665 23445556667777777765
No 29
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.01 E-value=6e-10 Score=100.47 Aligned_cols=116 Identities=22% Similarity=0.201 Sum_probs=68.6
Q ss_pred ceeeccccCccccCcccccCCCCCEEeccCCCCCCcCcccccCCCCCCeeecccccccccccCcceeecCccccccCCCC
Q 039311 479 EELSLDGTAIQEFPSSIERLSSLILLNLGNCLRLEGLPSKICKLKSLERLNLAEALKELKAEGIAIREVPSSIACLKNLG 558 (909)
Q Consensus 479 ~~L~L~~~~i~~lp~~i~~l~~L~~L~L~~c~~l~~lp~~l~~L~~L~~L~l~~~l~~L~l~~~~~~~lp~~i~~l~~L~ 558 (909)
+.|++++|.++.++. ++++++|++|++++|.. ..+|..++.+++|+.|++. +|.++.+
T Consensus 1 R~L~Ls~n~l~~l~~-l~~l~~L~~L~ls~N~l-~~lp~~~~~l~~L~~L~l~---------~N~i~~l----------- 58 (124)
T d1dcea3 1 RVLHLAHKDLTVLCH-LEQLLLVTHLDLSHNRL-RALPPALAALRCLEVLQAS---------DNALENV----------- 58 (124)
T ss_dssp SEEECTTSCCSSCCC-GGGGTTCCEEECCSSCC-CCCCGGGGGCTTCCEEECC---------SSCCCCC-----------
T ss_pred CEEEcCCCCCCCCcc-cccCCCCCEEECCCCcc-Ccchhhhhhhhcccccccc---------ccccccc-----------
Confidence 356777777777763 77777888888777643 4455555555555555442 2222222
Q ss_pred eeecCccccccccccccCccCCCCCCCEEecCCCCCCCcc--cccCCCCCCcEEECCCCCCeecc---h-hhccCCCCCE
Q 039311 559 RLSFESFMCHEQMGLLLPISFGLTSLTYLRLTDCGIIELP--ECLGQLSSRSILLLEKNNFERIP---E-SIIQLSHLFS 632 (909)
Q Consensus 559 ~L~l~~~~~~~~~~~~~~~~~~l~~L~~L~Ls~~~l~~lp--~~l~~l~~L~~L~L~~n~l~~lp---~-~i~~l~~L~~ 632 (909)
+.+..+++|+.|++++|.+.+++ ..+..+++|+.|++++|.++..+ . .+..+|+|+.
T Consensus 59 -----------------~~~~~l~~L~~L~l~~N~i~~~~~~~~l~~~~~L~~L~l~~N~i~~~~~~~~~l~~~lp~L~~ 121 (124)
T d1dcea3 59 -----------------DGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSS 121 (124)
T ss_dssp -----------------GGGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSE
T ss_pred -----------------CccccccccCeEECCCCccCCCCCchhhcCCCCCCEEECCCCcCCcCccHHHHHHHHCcCcce
Confidence 23445666777777777776554 34666777777777777766433 2 2344566655
Q ss_pred E
Q 039311 633 L 633 (909)
Q Consensus 633 L 633 (909)
|
T Consensus 122 L 122 (124)
T d1dcea3 122 I 122 (124)
T ss_dssp E
T ss_pred E
Confidence 4
No 30
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.01 E-value=2e-10 Score=112.74 Aligned_cols=105 Identities=17% Similarity=0.147 Sum_probs=82.9
Q ss_pred CCCccEEEeeCCCCCc-cCCC-C-CCCCeeEEEcCCCCccccc-cccccCCCCCEEecCCCcCCCcCCC-CCcccccccc
Q 039311 339 STELRYLQWHGCPLKS-LSSK-I-PPENLVSLEMPHSSIKQLW-KGVQRLVNLKHINLSHSEHLTKIPD-LSLATNLESL 413 (909)
Q Consensus 339 ~~~Lr~L~l~~~~l~~-lp~~-~-~~~~L~~L~L~~~~i~~lp-~~~~~L~~L~~L~Ls~~~~l~~~p~-l~~l~~L~~L 413 (909)
+..+++|++++|.+.. ++.. | .+.+|+.|+|++|.+..++ ..+..+++|++|+|++|++....|+ |.++++|++|
T Consensus 28 p~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~l~~l~~~~F~~l~~L~~L 107 (192)
T d1w8aa_ 28 PLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTL 107 (192)
T ss_dssp CTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEE
T ss_pred CCCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeeccccccccCHHHHhCCCccccc
Confidence 4678889999998865 4333 3 6789999999999888776 4567788999999999987666565 8889999999
Q ss_pred ccccccccceecccccCCCcccEecccccc
Q 039311 414 NFQGCTCLLETHSSIQYLNKLVVLNLKHCR 443 (909)
Q Consensus 414 ~L~~c~~l~~~p~~i~~L~~L~~L~L~~c~ 443 (909)
+|++|....-.+..+..+++|++|+|++|.
T Consensus 108 ~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~ 137 (192)
T d1w8aa_ 108 NLYDNQISCVMPGSFEHLNSLTSLNLASNP 137 (192)
T ss_dssp ECCSSCCCEECTTSSTTCTTCCEEECTTCC
T ss_pred ccCCccccccCHHHhcCCcccccccccccc
Confidence 999987555445667889999999998865
No 31
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.96 E-value=1.7e-11 Score=137.41 Aligned_cols=329 Identities=16% Similarity=0.084 Sum_probs=178.7
Q ss_pred cccCCCCCcEEEEecCCCCcCcceeecCCCCC-CCCccEEEeeCCCCCc-----cCCCC--CCCCeeEEEcCCCCccc--
Q 039311 307 SFTNMHKLRFFKFYSSHYGENVNKVHNFRGLE-STELRYLQWHGCPLKS-----LSSKI--PPENLVSLEMPHSSIKQ-- 376 (909)
Q Consensus 307 ~f~~~~~Lr~L~l~~~~~~~~~~~~~~~~~l~-~~~Lr~L~l~~~~l~~-----lp~~~--~~~~L~~L~L~~~~i~~-- 376 (909)
.+..++++|+|++.+|.+.+... ..+...+. .++|++|++++|.+.. +...+ ...+|++|++++|.++.
T Consensus 22 l~~~l~~l~~L~L~~~~i~~~~~-~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~it~~~ 100 (460)
T d1z7xw1 22 LLPLLQQCQVVRLDDCGLTEARC-KDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAG 100 (460)
T ss_dssp HHHHHTTCSEEEEESSCCCHHHH-HHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGG
T ss_pred HHHhCCCCCEEEeCCCCCCHHHH-HHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcCCCCCCEEECCCCCccccc
Confidence 35677888888888876532110 01111122 5678888888887742 33333 23478889998888764
Q ss_pred ---cccccccCCCCCEEecCCCcCCCcCCC----------------------------------CCcccccccccccccc
Q 039311 377 ---LWKGVQRLVNLKHINLSHSEHLTKIPD----------------------------------LSLATNLESLNFQGCT 419 (909)
Q Consensus 377 ---lp~~~~~L~~L~~L~Ls~~~~l~~~p~----------------------------------l~~l~~L~~L~L~~c~ 419 (909)
++..+..+++|++|++++|.+...... +.....++.++++++.
T Consensus 101 ~~~l~~~l~~~~~L~~L~L~~N~i~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ls~~~ 180 (460)
T d1z7xw1 101 CGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNND 180 (460)
T ss_dssp HHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSB
T ss_pred cccccchhhccccccccccccccchhhhhhhhhhcccccccccccccccccccchhhhcccccccccccccccccccccc
Confidence 445677888889999888764221000 0011222333333222
Q ss_pred cccee----cccc-cCCCcccEeccccccCccc----cCcc-ccCCcCcEEEccCCCCCc--------ccCccccCccee
Q 039311 420 CLLET----HSSI-QYLNKLVVLNLKHCRSLTS----LSTS-IHLGSLKKLILSGCSNLM--------SFPELSCNIEEL 481 (909)
Q Consensus 420 ~l~~~----p~~i-~~L~~L~~L~L~~c~~l~~----lp~~-~~l~~L~~L~Ls~c~~l~--------~lp~~~~~L~~L 481 (909)
..... ...+ ..-.....+++.+|..... .... .....++.+.++++.... ........++.+
T Consensus 181 ~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~n~~~~~~~~~~~~~~~~~~~~l~~l 260 (460)
T d1z7xw1 181 INEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTL 260 (460)
T ss_dssp CHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEE
T ss_pred cccccccccccccccccccccccccccccccchhhhcccccccccccccccchhhccccccccchhhccccccccccccc
Confidence 11000 0000 0112233344444321110 0000 135667777777654321 122234467788
Q ss_pred eccccCccc-----cCcccccCCCCCEEeccCCCCCCc----Ccccc-cCCCCCCeeecccccccccccCcceeecCccc
Q 039311 482 SLDGTAIQE-----FPSSIERLSSLILLNLGNCLRLEG----LPSKI-CKLKSLERLNLAEALKELKAEGIAIREVPSSI 551 (909)
Q Consensus 482 ~L~~~~i~~-----lp~~i~~l~~L~~L~L~~c~~l~~----lp~~l-~~L~~L~~L~l~~~l~~L~l~~~~~~~lp~~i 551 (909)
++++|.+.. +...+...+.++.+++++|..... +...+ .....|+.+++..+ .+.......+...+
T Consensus 261 ~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n~i~~~~~~~l~~~l~~~~~~L~~l~l~~~----~l~~~~~~~l~~~~ 336 (460)
T d1z7xw1 261 WIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSC----SFTAACCSHFSSVL 336 (460)
T ss_dssp ECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTS----CCBGGGHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccchhhcccccccccccccccccc----chhhhhhhhccccc
Confidence 888877662 233455677888888887754321 11111 23345666666432 11222222333445
Q ss_pred cccCCCCeeecCcccccccccccc-CccC-CCCCCCEEecCCCCCCC-----cccccCCCCCCcEEECCCCCCee-----
Q 039311 552 ACLKNLGRLSFESFMCHEQMGLLL-PISF-GLTSLTYLRLTDCGIIE-----LPECLGQLSSRSILLLEKNNFER----- 619 (909)
Q Consensus 552 ~~l~~L~~L~l~~~~~~~~~~~~~-~~~~-~l~~L~~L~Ls~~~l~~-----lp~~l~~l~~L~~L~L~~n~l~~----- 619 (909)
...++|+.|++++|.........+ ..+. ..+.|+.|+|++|.+++ ++..+..+++|++|+|++|+++.
T Consensus 337 ~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~ 416 (460)
T d1z7xw1 337 AQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQ 416 (460)
T ss_dssp HHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHH
T ss_pred ccccchhhhheeeecccCcccchhhhhhhcccCCCCEEECCCCCCChHHHHHHHHHHhcCCCCCEEECCCCcCCHHHHHH
Confidence 667789999999843221100111 1122 35789999999999984 55667788999999999999872
Q ss_pred cchhhc-cCCCCCEEeecCCCC
Q 039311 620 IPESII-QLSHLFSLGISHCER 640 (909)
Q Consensus 620 lp~~i~-~l~~L~~L~L~~c~~ 640 (909)
+...+. +...|+.|++.++..
T Consensus 417 l~~~l~~~~~~L~~l~l~~~~~ 438 (460)
T d1z7xw1 417 LVESVRQPGCLLEQLVLYDIYW 438 (460)
T ss_dssp HHHHHTSTTCCCCEEECTTCCC
T ss_pred HHHHHHhCCCccCEEECCCCCC
Confidence 223343 334789999988754
No 32
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=98.84 E-value=4.1e-11 Score=118.11 Aligned_cols=114 Identities=24% Similarity=0.211 Sum_probs=64.8
Q ss_pred CccccccccccCCCCCEEecCCCcCCCcCCCCCccccccccccccccccceecccccCCCcccEeccccccCccccCccc
Q 039311 373 SIKQLWKGVQRLVNLKHINLSHSEHLTKIPDLSLATNLESLNFQGCTCLLETHSSIQYLNKLVVLNLKHCRSLTSLSTSI 452 (909)
Q Consensus 373 ~i~~lp~~~~~L~~L~~L~Ls~~~~l~~~p~l~~l~~L~~L~L~~c~~l~~~p~~i~~L~~L~~L~L~~c~~l~~lp~~~ 452 (909)
.++.++.++..+++|++|+|++|.+ +.++.+..+++|++|++++|. +..+|.....+++|+.|++++| .++.++...
T Consensus 36 ~i~~l~~sl~~L~~L~~L~Ls~n~I-~~i~~l~~l~~L~~L~Ls~N~-i~~i~~~~~~~~~L~~L~l~~N-~i~~l~~~~ 112 (198)
T d1m9la_ 36 PIEKMDATLSTLKACKHLALSTNNI-EKISSLSGMENLRILSLGRNL-IKKIENLDAVADTLEELWISYN-QIASLSGIE 112 (198)
T ss_dssp TCCCCHHHHHHTTTCCEEECSEEEE-SCCCCHHHHTTCCEEECCEEE-ECSCSSHHHHHHHCCEEECSEE-ECCCHHHHH
T ss_pred chhhhhhHHhcccccceeECcccCC-CCcccccCCccccChhhcccc-cccccccccccccccccccccc-ccccccccc
Confidence 3555566666677777777776653 345556666666777766654 3344444444556666666664 344444333
Q ss_pred cCCcCcEEEccCCCCCcccCccccCcceeeccccCccccC--cccccCCCCCEEeccCCC
Q 039311 453 HLGSLKKLILSGCSNLMSFPELSCNIEELSLDGTAIQEFP--SSIERLSSLILLNLGNCL 510 (909)
Q Consensus 453 ~l~~L~~L~Ls~c~~l~~lp~~~~~L~~L~L~~~~i~~lp--~~i~~l~~L~~L~L~~c~ 510 (909)
.+++|+.|++++ |.+..++ ..+..+++|+.|++++|+
T Consensus 113 ~l~~L~~L~L~~---------------------N~i~~~~~~~~l~~l~~L~~L~L~~N~ 151 (198)
T d1m9la_ 113 KLVNLRVLYMSN---------------------NKITNWGEIDKLAALDKLEDLLLAGNP 151 (198)
T ss_dssp HHHHSSEEEESE---------------------EECCCHHHHHHHTTTTTCSEEEECSSH
T ss_pred cccccccccccc---------------------chhccccccccccCCCccceeecCCCc
Confidence 455555555544 4444443 235566666666666664
No 33
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=98.81 E-value=6.3e-11 Score=116.73 Aligned_cols=85 Identities=18% Similarity=0.183 Sum_probs=44.3
Q ss_pred CCCCEEecCCCCCCCcccccCCCCCCcEEECCCCCCeecch--hhccCCCCCEEeecCCCCCcccCCCCC--CcCceecc
Q 039311 582 TSLTYLRLTDCGIIELPECLGQLSSRSILLLEKNNFERIPE--SIIQLSHLFSLGISHCERLHSLPELPC--DLSDIEAH 657 (909)
Q Consensus 582 ~~L~~L~Ls~~~l~~lp~~l~~l~~L~~L~L~~n~l~~lp~--~i~~l~~L~~L~L~~c~~L~~lp~l~~--sL~~L~i~ 657 (909)
++|+.|++++|.+..++ .+..+++|+.|++++|+++.++. .+..+++|+.|+|++|+--...+.... ..+..-+.
T Consensus 93 ~~L~~L~l~~N~i~~l~-~~~~l~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~r~~vi~ 171 (198)
T d1m9la_ 93 DTLEELWISYNQIASLS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVK 171 (198)
T ss_dssp HHCCEEECSEEECCCHH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSSHHHHHHCTTTTHHHHHHHHHH
T ss_pred ccccccccccccccccc-cccccccccccccccchhccccccccccCCCccceeecCCCccccCcccccchhhHHHHHHH
Confidence 34555555556555543 34556666666666666665542 456666677777666542222222111 11222245
Q ss_pred cCcccccccC
Q 039311 658 CCSSLEALSG 667 (909)
Q Consensus 658 ~C~~L~~l~~ 667 (909)
.||+|+.+..
T Consensus 172 ~lp~L~~LD~ 181 (198)
T d1m9la_ 172 RLPNLKKLDG 181 (198)
T ss_dssp HCSSCCEESS
T ss_pred HCCCcCEeCC
Confidence 5666666554
No 34
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=98.76 E-value=7.5e-10 Score=119.26 Aligned_cols=89 Identities=18% Similarity=0.184 Sum_probs=52.9
Q ss_pred ccccCCCCeeecCcccccccccccc-CccCCCCCCCEEecCCCCCCC-----cccccC--CCCCCcEEECCCCCCe----
Q 039311 551 IACLKNLGRLSFESFMCHEQMGLLL-PISFGLTSLTYLRLTDCGIIE-----LPECLG--QLSSRSILLLEKNNFE---- 618 (909)
Q Consensus 551 i~~l~~L~~L~l~~~~~~~~~~~~~-~~~~~l~~L~~L~Ls~~~l~~-----lp~~l~--~l~~L~~L~L~~n~l~---- 618 (909)
+..+++|+.|++++|.........+ ..+...++|++|+|++|.+.+ +...+. ..+.|+.|++++|++.
T Consensus 211 l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~ 290 (344)
T d2ca6a1 211 LAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAV 290 (344)
T ss_dssp GGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHH
T ss_pred hcchhhhcccccccccccccccccccccccccccchhhhhhcCccCchhhHHHHHHhhhccCCCCCEEECCCCcCChHHH
Confidence 4455566666665532211100011 224456788888888888773 333332 2467888888888876
Q ss_pred -ecchhhc-cCCCCCEEeecCCC
Q 039311 619 -RIPESII-QLSHLFSLGISHCE 639 (909)
Q Consensus 619 -~lp~~i~-~l~~L~~L~L~~c~ 639 (909)
.+...+. +++.|+.|+|++|.
T Consensus 291 ~~l~~~l~~~~~~L~~L~l~~N~ 313 (344)
T d2ca6a1 291 RTLKTVIDEKMPDLLFLELNGNR 313 (344)
T ss_dssp HHHHHHHHHHCTTCCEEECTTSB
T ss_pred HHHHHHHHccCCCCCEEECCCCc
Confidence 2444553 67888999988865
No 35
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=98.64 E-value=2.5e-09 Score=115.09 Aligned_cols=112 Identities=17% Similarity=0.049 Sum_probs=73.9
Q ss_pred cCccccccCCCCeeecCccccccc--cccccCccCCCCCCCEEecCCCCCCC-----cccccCCCCCCcEEECCCCCCee
Q 039311 547 VPSSIACLKNLGRLSFESFMCHEQ--MGLLLPISFGLTSLTYLRLTDCGIIE-----LPECLGQLSSRSILLLEKNNFER 619 (909)
Q Consensus 547 lp~~i~~l~~L~~L~l~~~~~~~~--~~~~~~~~~~l~~L~~L~Ls~~~l~~-----lp~~l~~l~~L~~L~L~~n~l~~ 619 (909)
+...+..++.|+.|+++++..... .......+..+++|+.|+|++|.+.. +...+..+++|++|+|++|.+..
T Consensus 178 l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~ 257 (344)
T d2ca6a1 178 WAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSA 257 (344)
T ss_dssp HHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCH
T ss_pred ccchhhhhhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccccccccchhhhhhcCccCc
Confidence 344456667788888876322110 01112335568999999999998863 55677889999999999999873
Q ss_pred -----cchhhcc--CCCCCEEeecCCCCCcc-----cCC----CCCCcCceecccC
Q 039311 620 -----IPESIIQ--LSHLFSLGISHCERLHS-----LPE----LPCDLSDIEAHCC 659 (909)
Q Consensus 620 -----lp~~i~~--l~~L~~L~L~~c~~L~~-----lp~----l~~sL~~L~i~~C 659 (909)
+-..+.. .+.|+.|+|++|. +.. +.. -.++|+.|++.++
T Consensus 258 ~g~~~l~~~l~~~~~~~L~~L~ls~N~-i~~~~~~~l~~~l~~~~~~L~~L~l~~N 312 (344)
T d2ca6a1 258 RGAAAVVDAFSKLENIGLQTLRLQYNE-IELDAVRTLKTVIDEKMPDLLFLELNGN 312 (344)
T ss_dssp HHHHHHHHHHHTCSSCCCCEEECCSSC-CBHHHHHHHHHHHHHHCTTCCEEECTTS
T ss_pred hhhHHHHHHhhhccCCCCCEEECCCCc-CChHHHHHHHHHHHccCCCCCEEECCCC
Confidence 2233333 4679999999985 432 211 2346778887664
No 36
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.58 E-value=5.8e-08 Score=90.98 Aligned_cols=98 Identities=21% Similarity=0.135 Sum_probs=70.4
Q ss_pred cCcceeecCccccccCCCCeeecCccccccccccccCccCCCCCCCEEecCCCCCCCc-ccccCCCCCCcEEECCCCCCe
Q 039311 540 EGIAIREVPSSIACLKNLGRLSFESFMCHEQMGLLLPISFGLTSLTYLRLTDCGIIEL-PECLGQLSSRSILLLEKNNFE 618 (909)
Q Consensus 540 ~~~~~~~lp~~i~~l~~L~~L~l~~~~~~~~~~~~~~~~~~l~~L~~L~Ls~~~l~~l-p~~l~~l~~L~~L~L~~n~l~ 618 (909)
.++...+.|..+..+++|+.|++.+ .+.+.......+.++++|+.|+|++|++..+ +..+..+++|+.|+|++|+++
T Consensus 16 ~~~~~~~~p~~l~~l~~l~~L~l~~--n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~ 93 (156)
T d2ifga3 16 TRDGALDSLHHLPGAENLTELYIEN--QQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALE 93 (156)
T ss_dssp CSSCCCTTTTTSCSCSCCSEEECCS--CSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCS
T ss_pred cCCCCccCcccccCccccCeeecCC--CccccccCchhhccccccCcceeeccccCCcccccccccccccceeccCCCCc
Confidence 4444555566666667777777765 2233333444567788888888888888876 456788888888899888888
Q ss_pred ecchhhccCCCCCEEeecCCC
Q 039311 619 RIPESIIQLSHLFSLGISHCE 639 (909)
Q Consensus 619 ~lp~~i~~l~~L~~L~L~~c~ 639 (909)
.+|..+....+|+.|+|++++
T Consensus 94 ~l~~~~~~~~~l~~L~L~~Np 114 (156)
T d2ifga3 94 SLSWKTVQGLSLQELVLSGNP 114 (156)
T ss_dssp CCCSTTTCSCCCCEEECCSSC
T ss_pred ccChhhhccccccccccCCCc
Confidence 888776666678888888875
No 37
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.48 E-value=2.1e-07 Score=86.99 Aligned_cols=101 Identities=23% Similarity=0.262 Sum_probs=57.2
Q ss_pred eEEEcCCCCccccccccccCCCCCEEecCCCcCCCcCC--CCCccccccccccccccccceecccccCCCcccEeccccc
Q 039311 365 VSLEMPHSSIKQLWKGVQRLVNLKHINLSHSEHLTKIP--DLSLATNLESLNFQGCTCLLETHSSIQYLNKLVVLNLKHC 442 (909)
Q Consensus 365 ~~L~L~~~~i~~lp~~~~~L~~L~~L~Ls~~~~l~~~p--~l~~l~~L~~L~L~~c~~l~~~p~~i~~L~~L~~L~L~~c 442 (909)
+.++.+++++...|..+..+++|+.|+++++..++.++ .|.++++|+.|++++|....--+..+..+++|++|+|++|
T Consensus 11 ~~l~c~~~~~~~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N 90 (156)
T d2ifga3 11 SGLRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (156)
T ss_dssp SCEECCSSCCCTTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred CeEEecCCCCccCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccCC
Confidence 34555555555556556666666666665554444444 2566666666666665433333445666677777777764
Q ss_pred cCccccCccc-cCCcCcEEEccCCC
Q 039311 443 RSLTSLSTSI-HLGSLKKLILSGCS 466 (909)
Q Consensus 443 ~~l~~lp~~~-~l~~L~~L~Ls~c~ 466 (909)
. ++.+|... ...+|+.|+|++|.
T Consensus 91 ~-l~~l~~~~~~~~~l~~L~L~~Np 114 (156)
T d2ifga3 91 A-LESLSWKTVQGLSLQELVLSGNP 114 (156)
T ss_dssp C-CSCCCSTTTCSCCCCEEECCSSC
T ss_pred C-CcccChhhhccccccccccCCCc
Confidence 3 55555543 34456666666643
No 38
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.80 E-value=0.00021 Score=66.34 Aligned_cols=118 Identities=20% Similarity=0.139 Sum_probs=57.9
Q ss_pred CCCEEecCCCcCCCcCCCCCccccccccccccccccceecccccCCCcccEeccccccCccccCcc---c-cCCcCcEEE
Q 039311 386 NLKHINLSHSEHLTKIPDLSLATNLESLNFQGCTCLLETHSSIQYLNKLVVLNLKHCRSLTSLSTS---I-HLGSLKKLI 461 (909)
Q Consensus 386 ~L~~L~Ls~~~~l~~~p~l~~l~~L~~L~L~~c~~l~~~p~~i~~L~~L~~L~L~~c~~l~~lp~~---~-~l~~L~~L~ 461 (909)
..+.|++++.. ..+++..+..+..++...+ ....++.....+++|++|+|++|. ++.++.. + .+++|+.|+
T Consensus 23 ~~~~Ldls~l~---~~~~l~~~~~~~~l~~~~~-~~~~l~~~~~~~~~L~~L~Ls~N~-i~~l~~~~~~~~~l~~L~~L~ 97 (162)
T d1koha1 23 SQQALDLKGLR---SDPDLVAQNIDVVLNRRSS-MAATLRIIEENIPELLSLNLSNNR-LYRLDDMSSIVQKAPNLKILN 97 (162)
T ss_dssp SSCCBCCCCCS---SCTTTTTTTCCCCTTSHHH-HHHHHHHHHHHCTTCCCCCCCSSC-CCCCSGGGTHHHHSTTCCCCC
T ss_pred hhCeeecccCC---CCchhhhccchhhcchhhh-HhhhhHHHHHhCCCCCEeeCCCcc-ccCCchhHHHHhhCCcccccc
Confidence 45566776543 2344444444555554432 222223333456777777777753 4444321 1 244444444
Q ss_pred ccCCCCCcccCccccCcceeeccccCccccCcc-cccCCCCCEEeccCCCCCCcCcc-------cccCCCCCCeee
Q 039311 462 LSGCSNLMSFPELSCNIEELSLDGTAIQEFPSS-IERLSSLILLNLGNCLRLEGLPS-------KICKLKSLERLN 529 (909)
Q Consensus 462 Ls~c~~l~~lp~~~~~L~~L~L~~~~i~~lp~~-i~~l~~L~~L~L~~c~~l~~lp~-------~l~~L~~L~~L~ 529 (909)
+ ++|.|+.++.. .....+|+.|++++|........ .+..+|+|+.|+
T Consensus 98 L---------------------s~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~~~i~~~~P~L~~LD 152 (162)
T d1koha1 98 L---------------------SGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISAIRERFPKLLRLD 152 (162)
T ss_dssp C---------------------TTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHHHHHHTTSTTCCEET
T ss_pred c---------------------ccCccccchhhhhhhccccceeecCCCCcCcCcccchhHHHHHHHHCCCCCEEC
Confidence 4 44555555431 22334567777777655443221 134556666554
No 39
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.56 E-value=0.00035 Score=64.78 Aligned_cols=60 Identities=20% Similarity=0.177 Sum_probs=35.9
Q ss_pred CCCCCEEecCCCCCCCc---ccccCCCCCCcEEECCCCCCeecch-hhccCCCCCEEeecCCCC
Q 039311 581 LTSLTYLRLTDCGIIEL---PECLGQLSSRSILLLEKNNFERIPE-SIIQLSHLFSLGISHCER 640 (909)
Q Consensus 581 l~~L~~L~Ls~~~l~~l---p~~l~~l~~L~~L~L~~n~l~~lp~-~i~~l~~L~~L~L~~c~~ 640 (909)
+++|+.|+|++|.++.+ +..+..+++|+.|+|++|.++.++. .......|+.|++++|+-
T Consensus 64 ~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl 127 (162)
T d1koha1 64 IPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSL 127 (162)
T ss_dssp CTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTT
T ss_pred CCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCCc
Confidence 45666666666666643 2334556777777777777776654 222334567777777653
No 40
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=95.51 E-value=0.0024 Score=59.12 Aligned_cols=35 Identities=14% Similarity=-0.003 Sum_probs=16.3
Q ss_pred CCCCEEecCCCCCCC-----cccccCCCCCCcEEECCCCC
Q 039311 582 TSLTYLRLTDCGIIE-----LPECLGQLSSRSILLLEKNN 616 (909)
Q Consensus 582 ~~L~~L~Ls~~~l~~-----lp~~l~~l~~L~~L~L~~n~ 616 (909)
+.|+.|+|++|.+.+ +...+..-++|++|+|++|.
T Consensus 72 ~~L~~L~L~~n~i~~~g~~~l~~aL~~n~sL~~L~l~~n~ 111 (167)
T d1pgva_ 72 PSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQR 111 (167)
T ss_dssp SSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCS
T ss_pred ccccceeeehhhcchHHHHHHHHHHHhCCcCCEEECCCCc
Confidence 445555555554442 23334444455555555443
No 41
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=94.85 E-value=0.0073 Score=55.71 Aligned_cols=83 Identities=12% Similarity=0.131 Sum_probs=53.1
Q ss_pred cCCCCeeecCccccccccccc----cCccCCCCCCCEEecCCCCCCC-----cccccCCCCCCcEEECCCCCCee-----
Q 039311 554 LKNLGRLSFESFMCHEQMGLL----LPISFGLTSLTYLRLTDCGIIE-----LPECLGQLSSRSILLLEKNNFER----- 619 (909)
Q Consensus 554 l~~L~~L~l~~~~~~~~~~~~----~~~~~~l~~L~~L~Ls~~~l~~-----lp~~l~~l~~L~~L~L~~n~l~~----- 619 (909)
.++|+.|+|++ ++.+.... ...+...++|+.|+|++|.+.+ +...+...+.|+.|+|++|.+..
T Consensus 14 ~~~L~~L~L~~--~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~ 91 (167)
T d1pgva_ 14 DTDLKEVNINN--MKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR 91 (167)
T ss_dssp CSSCCEEECTT--CCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH
T ss_pred CCCCcEEEeCC--CCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHH
Confidence 35566666655 32222211 1224456778888888888762 44555667888889998888772
Q ss_pred cchhhccCCCCCEEeecCC
Q 039311 620 IPESIIQLSHLFSLGISHC 638 (909)
Q Consensus 620 lp~~i~~l~~L~~L~L~~c 638 (909)
+-..+...+.|++|+|+++
T Consensus 92 l~~aL~~n~sL~~L~l~~n 110 (167)
T d1pgva_ 92 LLRSTLVTQSIVEFKADNQ 110 (167)
T ss_dssp HHHHTTTTCCCSEEECCCC
T ss_pred HHHHHHhCCcCCEEECCCC
Confidence 3345566778888888876
No 42
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=92.41 E-value=0.038 Score=50.51 Aligned_cols=84 Identities=15% Similarity=0.067 Sum_probs=51.1
Q ss_pred ccCCCCeeecCcccccccccccc----CccCCCCCCCEEecCCCCCCC-----cccccCCCCCCcEEECCCCCCe-----
Q 039311 553 CLKNLGRLSFESFMCHEQMGLLL----PISFGLTSLTYLRLTDCGIIE-----LPECLGQLSSRSILLLEKNNFE----- 618 (909)
Q Consensus 553 ~l~~L~~L~l~~~~~~~~~~~~~----~~~~~l~~L~~L~Ls~~~l~~-----lp~~l~~l~~L~~L~L~~n~l~----- 618 (909)
..++|+.|++++ ++.+....+ ..+...++|++|+|++|.+.. +...+...++++.+++++|.+.
T Consensus 15 ~~~~L~~L~L~~--~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~ 92 (166)
T d1io0a_ 15 NDPDLEEVNLNN--IMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGIL 92 (166)
T ss_dssp TCTTCCEEECTT--CTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHH
T ss_pred cCCCCcEEEcCC--CCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHH
Confidence 345666666654 333322222 123356778888888887762 4445566778888888887765
Q ss_pred ecchhhccCCCCCEEeecCC
Q 039311 619 RIPESIIQLSHLFSLGISHC 638 (909)
Q Consensus 619 ~lp~~i~~l~~L~~L~L~~c 638 (909)
.+-..+...++|+.++|+.|
T Consensus 93 ~l~~~l~~~~~L~~l~L~l~ 112 (166)
T d1io0a_ 93 ALVEALQSNTSLIELRIDNQ 112 (166)
T ss_dssp HHHHGGGGCSSCCEEECCCC
T ss_pred HHHHHHHhCccccEEeeccC
Confidence 23455667777887777654
No 43
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=91.91 E-value=0.1 Score=51.41 Aligned_cols=103 Identities=15% Similarity=0.171 Sum_probs=64.6
Q ss_pred hCCCeEEEEEeCCCCHHH------HHHHhhccCCCCCCCEEEEEeCCchhhhhc------------CCCcEEECCCCCHH
Q 039311 47 LSRKKVLIVFDDVSTSEQ------MEFLIGNQGWLMQGSRLIITARDKQVLKNC------------GVDTIYEVKELFDD 108 (909)
Q Consensus 47 L~~kr~LlVLDDv~~~~~------~~~l~~~~~~~~~gSrIivTTR~~~v~~~~------------~~~~~y~l~~L~~~ 108 (909)
...+++++|+|++..... +..+..... ....-..+++++........ .....+.+.+++.+
T Consensus 133 ~~~~~~~i~id~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~l~~~ 211 (283)
T d2fnaa2 133 ASKDNVIIVLDEAQELVKLRGVNLLPALAYAYD-NLKRIKFIMSGSEMGLLYDYLRVEDPESPLFGRAFSTVELKPFSRE 211 (283)
T ss_dssp TCSSCEEEEEETGGGGGGCTTCCCHHHHHHHHH-HCTTEEEEEEESSHHHHHHHTTTTCTTSTTTTCCCEEEEECCCCHH
T ss_pred hcccccccccchhhhhcccchHHHHHHHHHHHH-hhhhhhhhhccccchHHHHHHHhhhhcchhcccceeEEeeCCCCHH
Confidence 457899999999854221 222222111 12344566666665443322 12357889999999
Q ss_pred HHHHHHHHhhcCCCCCCchhHHHHHHHHHHhCCCchHHHHHhHhhc
Q 039311 109 DARMLFSRYAFGKNYPNVGYMELSNKIIKYAKGVPLAIKVLGRFLC 154 (909)
Q Consensus 109 es~~LF~~~af~~~~~~~~~~~l~~~iv~~c~GlPLal~~lg~~L~ 154 (909)
|+.+++.+.+-......+. ..+|.++++|.|..+..+|..+.
T Consensus 212 e~~~~l~~~~~~~~~~~~~----~~~i~~~~~G~P~~L~~~~~~~~ 253 (283)
T d2fnaa2 212 EAIEFLRRGFQEADIDFKD----YEVVYEKIGGIPGWLTYFGFIYL 253 (283)
T ss_dssp HHHHHHHHHHHHHTCCCCC----HHHHHHHHCSCHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhhcCCCHHH----HHHHHHHhCCCHHHHHHHHHHHH
Confidence 9999987654222222122 46899999999999999887664
No 44
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=91.32 E-value=0.02 Score=52.44 Aligned_cols=58 Identities=19% Similarity=0.181 Sum_probs=39.5
Q ss_pred CCCCCEEecCCCCCCC-----cccccCCCCCCcEEECC--CCCCe-----ecchhhccCCCCCEEeecCC
Q 039311 581 LTSLTYLRLTDCGIIE-----LPECLGQLSSRSILLLE--KNNFE-----RIPESIIQLSHLFSLGISHC 638 (909)
Q Consensus 581 l~~L~~L~Ls~~~l~~-----lp~~l~~l~~L~~L~L~--~n~l~-----~lp~~i~~l~~L~~L~L~~c 638 (909)
.++|+.|++++|.+.. +...+...++|+.++|+ +|.+. .+...+...+.|+.|++..+
T Consensus 73 ~~~l~~l~l~~~~~~~~g~~~l~~~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~~n~~L~~L~l~~~ 142 (166)
T d1io0a_ 73 NNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFT 142 (166)
T ss_dssp CSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCS
T ss_pred cccchhhhhccccccchhHHHHHHHHHhCccccEEeeccCCCcCcHHHHHHHHHHHHhCCCcCEEeCcCC
Confidence 5678888888887762 45666777888876665 45554 34455667778888877643
No 45
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=85.87 E-value=1.7 Score=40.44 Aligned_cols=92 Identities=11% Similarity=0.052 Sum_probs=67.0
Q ss_pred CCeEEEEEeCCCC--HHHHHHHhhccCCCCCCCEEEEEeCCch-hhhhc-CCCcEEECCCCCHHHHHHHHHHhhcCCCCC
Q 039311 49 RKKVLIVFDDVST--SEQMEFLIGNQGWLMQGSRLIITARDKQ-VLKNC-GVDTIYEVKELFDDDARMLFSRYAFGKNYP 124 (909)
Q Consensus 49 ~kr~LlVLDDv~~--~~~~~~l~~~~~~~~~gSrIivTTR~~~-v~~~~-~~~~~y~l~~L~~~es~~LF~~~af~~~~~ 124 (909)
+++-++|+||++. .+....+...+.....+.++|.||++.+ +.... ..-..+.+.+++.++..+.+.... ..
T Consensus 107 ~~~kviIide~d~l~~~a~n~Llk~lEep~~~~~fIl~t~~~~~ll~tI~SRc~~i~~~~~~~~~~~~~L~~~~----~~ 182 (207)
T d1a5ta2 107 GGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREV----TM 182 (207)
T ss_dssp SSCEEEEESCGGGBCHHHHHHHHHHHTSCCTTEEEEEEESCGGGSCHHHHTTSEEEECCCCCHHHHHHHHHHHC----CC
T ss_pred CccceEEechhhhhhhhhhHHHHHHHHhhcccceeeeeecChhhhhhhhcceeEEEecCCCCHHHHHHHHHHcC----CC
Confidence 4677999999985 4457777777777778899888888754 44433 233689999999999999886653 11
Q ss_pred CchhHHHHHHHHHHhCCCchHHH
Q 039311 125 NVGYMELSNKIIKYAKGVPLAIK 147 (909)
Q Consensus 125 ~~~~~~l~~~iv~~c~GlPLal~ 147 (909)
+ .+....+++.++|.|-.+.
T Consensus 183 ~---~~~~~~i~~~s~Gs~r~al 202 (207)
T d1a5ta2 183 S---QDALLAALRLSAGSPGAAL 202 (207)
T ss_dssp C---HHHHHHHHHHTTTCHHHHH
T ss_pred C---HHHHHHHHHHcCCCHHHHH
Confidence 1 3567888899999885543
No 46
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=76.78 E-value=4 Score=38.57 Aligned_cols=93 Identities=11% Similarity=0.069 Sum_probs=60.3
Q ss_pred CeEEEEEeCCCCH--HHHHHHhhccCCCCCCCEEEEEeCCchh-hhhc-CCCcEEECCCCCHHHHHHHHHHhhcCCCCCC
Q 039311 50 KKVLIVFDDVSTS--EQMEFLIGNQGWLMQGSRLIITARDKQV-LKNC-GVDTIYEVKELFDDDARMLFSRYAFGKNYPN 125 (909)
Q Consensus 50 kr~LlVLDDv~~~--~~~~~l~~~~~~~~~gSrIivTTR~~~v-~~~~-~~~~~y~l~~L~~~es~~LF~~~af~~~~~~ 125 (909)
++.++|||+|+.. +.-+.|...+.....+.++|+||.+.+- .... ..-..+.+.+++.++-.+.....+-......
T Consensus 115 ~~kviiIde~d~l~~~~q~~Llk~lE~~~~~~~~il~tn~~~~i~~~i~SRc~~i~~~~~~~~~i~~~l~~i~~~e~~~~ 194 (239)
T d1njfa_ 115 RFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAH 194 (239)
T ss_dssp SSEEEEEETGGGSCHHHHHHHHHHHHSCCTTEEEEEEESCGGGSCHHHHTTSEEEECCCCCHHHHHHHHHHHHHHHTCCB
T ss_pred CCEEEEEECcccCCHHHHHHHHHHHhcCCCCeEEEEEcCCccccChhHhhhhcccccccCcHHHhhhHHHHHHhhhccCC
Confidence 5568899999864 3344555555545567788888876532 2222 2236899999999998887766653222111
Q ss_pred chhHHHHHHHHHHhCCCch
Q 039311 126 VGYMELSNKIIKYAKGVPL 144 (909)
Q Consensus 126 ~~~~~l~~~iv~~c~GlPL 144 (909)
+ .+....|++.++|.+-
T Consensus 195 ~--~~~l~~i~~~s~Gd~R 211 (239)
T d1njfa_ 195 E--PRALQLLARAAEGSLR 211 (239)
T ss_dssp C--HHHHHHHHHHTTTCHH
T ss_pred C--HHHHHHHHHHcCCCHH
Confidence 1 2456788999999874
No 47
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=71.86 E-value=3.1 Score=39.55 Aligned_cols=95 Identities=8% Similarity=0.112 Sum_probs=58.8
Q ss_pred CCeEEEEEeCCCCH--HHHHHHhhccCCCCCCCEEEEEeCCch-hhhhc-CCCcEEECCCCCHHHHHHHHHHhhcCCCCC
Q 039311 49 RKKVLIVFDDVSTS--EQMEFLIGNQGWLMQGSRLIITARDKQ-VLKNC-GVDTIYEVKELFDDDARMLFSRYAFGKNYP 124 (909)
Q Consensus 49 ~kr~LlVLDDv~~~--~~~~~l~~~~~~~~~gSrIivTTR~~~-v~~~~-~~~~~y~l~~L~~~es~~LF~~~af~~~~~ 124 (909)
.+.-++|||+++.. +.+..+...+.......++|+||.+.+ +.... +.-.++++.+++.++..+.+..-+ ..+..
T Consensus 130 ~~~~iiiide~d~l~~~~~~~l~~~~e~~~~~~~~Il~tn~~~~i~~~l~sR~~~i~~~~~~~~~~~~~l~~i~-~~e~~ 208 (252)
T d1sxje2 130 HRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAPIKSQCLLIRCPAPSDSEISTILSDVV-TNERI 208 (252)
T ss_dssp -CCEEEEEECTTSSCHHHHHHHHHHHHHSTTTEEEEEEESCSCSSCHHHHTTSEEEECCCCCHHHHHHHHHHHH-HHHTC
T ss_pred CCceEEEeccccccccccchhhhcccccccccccceeeeccccchhhhhhcchheeeecccchhhHHHHHHHHH-HHcCC
Confidence 34558899999863 345555554444556778888887653 22111 112478999999999999886544 22111
Q ss_pred CchhHHHHHHHHHHhCCCch
Q 039311 125 NVGYMELSNKIIKYAKGVPL 144 (909)
Q Consensus 125 ~~~~~~l~~~iv~~c~GlPL 144 (909)
...-.+..+.|++.+.|-+-
T Consensus 209 ~~~~~~~l~~i~~~s~Gd~R 228 (252)
T d1sxje2 209 QLETKDILKRIAQASNGNLR 228 (252)
T ss_dssp EECCSHHHHHHHHHHTTCHH
T ss_pred CCCcHHHHHHHHHHcCCcHH
Confidence 11113566788999998764
No 48
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=69.36 E-value=4.8 Score=37.33 Aligned_cols=67 Identities=12% Similarity=0.157 Sum_probs=42.2
Q ss_pred eEEEEEeCCCCH---HHHHHH-hhccCC-CCCCCEEEEEeCCc---------hhhhhcCCCcEEECCCCCHHHHHHHHHH
Q 039311 51 KVLIVFDDVSTS---EQMEFL-IGNQGW-LMQGSRLIITARDK---------QVLKNCGVDTIYEVKELFDDDARMLFSR 116 (909)
Q Consensus 51 r~LlVLDDv~~~---~~~~~l-~~~~~~-~~~gSrIivTTR~~---------~v~~~~~~~~~y~l~~L~~~es~~LF~~ 116 (909)
-=+|+||||+.. .+|+.. ...+.. ...|.+||+|++.. ++...+...-+++++ +++++-.++..+
T Consensus 98 ~dll~iDDi~~i~~~~~~~~~lf~lin~~~~~~~~iiits~~~p~~l~~~~~dL~SRL~~g~~~~i~-p~d~~~~~iL~~ 176 (213)
T d1l8qa2 98 VDLLLLDDVQFLSGKERTQIEFFHIFNTLYLLEKQIILASDRHPQKLDGVSDRLVSRFEGGILVEIE-LDNKTRFKIIKE 176 (213)
T ss_dssp CSEEEEECGGGGTTCHHHHHHHHHHHHHHHHTTCEEEEEESSCGGGCTTSCHHHHHHHHTSEEEECC-CCHHHHHHHHHH
T ss_pred ccchhhhhhhhhcCchHHHHHHHHHHHHHhhccceEEEecCCcchhccccchHHHHHhhCceEEEEC-CCcHHHHHHHHH
Confidence 457899999743 445542 222222 24788999999853 223333455688886 577777777777
Q ss_pred hh
Q 039311 117 YA 118 (909)
Q Consensus 117 ~a 118 (909)
+|
T Consensus 177 ~a 178 (213)
T d1l8qa2 177 KL 178 (213)
T ss_dssp HH
T ss_pred HH
Confidence 76
No 49
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=60.80 E-value=10 Score=34.99 Aligned_cols=93 Identities=11% Similarity=0.089 Sum_probs=60.7
Q ss_pred CCeEEEEEeCCCCH--HHHHHHhhccCCCCCCCEEEEEeCCch-hhhhc-CCCcEEECCCCCHHHHHHHHHHhhcCCCCC
Q 039311 49 RKKVLIVFDDVSTS--EQMEFLIGNQGWLMQGSRLIITARDKQ-VLKNC-GVDTIYEVKELFDDDARMLFSRYAFGKNYP 124 (909)
Q Consensus 49 ~kr~LlVLDDv~~~--~~~~~l~~~~~~~~~gSrIivTTR~~~-v~~~~-~~~~~y~l~~L~~~es~~LF~~~af~~~~~ 124 (909)
.++-.+|+|+++.. ..-..+...+......+++++||.... +.... ..-..+++++++.++-.+...+.+-.....
T Consensus 98 ~~~kiiiiDe~d~~~~~~~~~Ll~~le~~~~~~~~~~~~~~~~~i~~~i~sr~~~i~~~~~~~~~i~~~l~~I~~~e~i~ 177 (227)
T d1sxjc2 98 KGFKLIILDEADAMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTPALLSQCTRFRFQPLPQEAIERRIANVLVHEKLK 177 (227)
T ss_dssp CSCEEEEETTGGGSCHHHHHHHHHHHHHTTTTEEEEEEESCGGGSCHHHHTTSEEEECCCCCHHHHHHHHHHHHHTTTCC
T ss_pred CCeEEEEEeccccchhhHHHHHHHHhhhcccceeeccccCcHHHhHHHHHHHHhhhcccccccccccccccccccccccc
Confidence 34558889999754 334444444444556788888887643 33222 234689999999999998888776543322
Q ss_pred CchhHHHHHHHHHHhCCCc
Q 039311 125 NVGYMELSNKIIKYAKGVP 143 (909)
Q Consensus 125 ~~~~~~l~~~iv~~c~GlP 143 (909)
-+ .+....|++.++|-.
T Consensus 178 i~--~~~l~~i~~~s~Gd~ 194 (227)
T d1sxjc2 178 LS--PNAEKALIELSNGDM 194 (227)
T ss_dssp BC--HHHHHHHHHHHTTCH
T ss_pred CC--HHHHHHHHHHcCCcH
Confidence 11 355688899998864
No 50
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=57.83 E-value=13 Score=34.39 Aligned_cols=99 Identities=10% Similarity=0.041 Sum_probs=61.2
Q ss_pred HHHhhCCCeEEEEEeCCCCH--HHHHHHhhccCCCCCCCEEEEEeCCc-hhhhhc-CCCcEEECCCCCHHHHHHHHHHhh
Q 039311 43 RSKRLSRKKVLIVFDDVSTS--EQMEFLIGNQGWLMQGSRLIITARDK-QVLKNC-GVDTIYEVKELFDDDARMLFSRYA 118 (909)
Q Consensus 43 i~~~L~~kr~LlVLDDv~~~--~~~~~l~~~~~~~~~gSrIivTTR~~-~v~~~~-~~~~~y~l~~L~~~es~~LF~~~a 118 (909)
+......++-.+|+|+++.. ..+..+...........++|+||... .+.... ..-..+++++++.++..+.+.+.+
T Consensus 101 ~~~~~~~~~~viiiDe~d~l~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~l~sr~~~i~f~~~~~~~~~~~L~~i~ 180 (237)
T d1sxjd2 101 LENYPCPPYKIIILDEADSMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASQCSKFRFKALDASNAIDRLRFIS 180 (237)
T ss_dssp HHHSCCCSCEEEEETTGGGSCHHHHHHHHHHHHHTTTTEEEEEEESCGGGSCHHHHHHSEEEECCCCCHHHHHHHHHHHH
T ss_pred HhhccccCceEEEEecccccCHHHHHHHhhccccccccccccccccccccccccccchhhhhccccccccccchhhhhhh
Confidence 33444445557899999743 34444444333344566777776553 332222 112579999999999999998877
Q ss_pred cCCCCCCchhHHHHHHHHHHhCCCc
Q 039311 119 FGKNYPNVGYMELSNKIIKYAKGVP 143 (909)
Q Consensus 119 f~~~~~~~~~~~l~~~iv~~c~GlP 143 (909)
......-+ .+..+.|++.++|-.
T Consensus 181 ~~e~i~i~--~~~l~~ia~~s~gd~ 203 (237)
T d1sxjd2 181 EQENVKCD--DGVLERILDISAGDL 203 (237)
T ss_dssp HTTTCCCC--HHHHHHHHHHTSSCH
T ss_pred hhhcCcCC--HHHHHHHHHHcCCCH
Confidence 65442222 356788888988854
No 51
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=57.23 E-value=17 Score=34.25 Aligned_cols=91 Identities=11% Similarity=0.162 Sum_probs=53.3
Q ss_pred CCCeEEEEEeCCCCHH----------------HHHHHhhccCCCCCCCEE--EEEeCCchhhhh-c----CCCcEEECCC
Q 039311 48 SRKKVLIVFDDVSTSE----------------QMEFLIGNQGWLMQGSRL--IITARDKQVLKN-C----GVDTIYEVKE 104 (909)
Q Consensus 48 ~~kr~LlVLDDv~~~~----------------~~~~l~~~~~~~~~gSrI--ivTTR~~~v~~~-~----~~~~~y~l~~ 104 (909)
+...+.|+|||++..- ....+...+......++| |-||...+-+.. + ..++.+++..
T Consensus 99 ~~~p~Ii~iDeid~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~~~~~~vivi~tTn~~~~ld~al~R~~Rf~~~i~~~~ 178 (247)
T d1ixza_ 99 RHAPCIVFIDEIDAVGRKRGSGVGGGNDEREQTLNQLLVEMDGFEKDTAIVVMAATNRPDILDPALLRPGRFDRQIAIDA 178 (247)
T ss_dssp TSSSEEEEEETHHHHHC---------CHHHHHHHHHHHHHHHTCCTTCCEEEEEEESCGGGSCGGGGSTTSSCEEEECCS
T ss_pred HcCCEEEEEEChhhhCccCCCCCCCCcHHHHHHHHHHHHHhhCCCCCCCEEEEEeCCCccccCHhHcCCCCCcEEEEECC
Confidence 4578899999985310 122333322222223333 347766443322 1 3568999999
Q ss_pred CCHHHHHHHHHHhhcCCC-CCCchhHHHHHHHHHHhCCC
Q 039311 105 LFDDDARMLFSRYAFGKN-YPNVGYMELSNKIIKYAKGV 142 (909)
Q Consensus 105 L~~~es~~LF~~~af~~~-~~~~~~~~l~~~iv~~c~Gl 142 (909)
.+.++-.++|..+..+.. ..+.++ ..+++.+.|.
T Consensus 179 P~~~eR~~il~~~l~~~~~~~~~~~----~~la~~t~g~ 213 (247)
T d1ixza_ 179 PDVKGREQILRIHARGKPLAEDVDL----ALLAKRTPGF 213 (247)
T ss_dssp CCHHHHHHHHHHHHTTSCBCTTCCH----HHHHHTCTTC
T ss_pred cCHHHHHHHHHHHhcccCCccccCH----HHHHHHCCCC
Confidence 999999999998875433 233344 3445566665
No 52
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=51.94 E-value=17 Score=33.37 Aligned_cols=94 Identities=13% Similarity=0.125 Sum_probs=60.5
Q ss_pred CeEEEEEeCCCCH--HHHHHHhhccCCCCCCCEEEEEeCCc-hhhhhc-CCCcEEECCCCCHHHHHHHHHHhhcCCCCCC
Q 039311 50 KKVLIVFDDVSTS--EQMEFLIGNQGWLMQGSRLIITARDK-QVLKNC-GVDTIYEVKELFDDDARMLFSRYAFGKNYPN 125 (909)
Q Consensus 50 kr~LlVLDDv~~~--~~~~~l~~~~~~~~~gSrIivTTR~~-~v~~~~-~~~~~y~l~~L~~~es~~LF~~~af~~~~~~ 125 (909)
++-++|+|+++.. .....+...........++++||.+. .+.... ..-..+++++++.++-.+.+.+.+-.....-
T Consensus 101 ~~kviiiDe~d~~~~~~~~~ll~~~e~~~~~~~~i~~~~~~~~i~~~l~sr~~~i~~~~~~~~~i~~~l~~i~~~e~~~i 180 (224)
T d1sxjb2 101 KHKIVILDEADSMTAGAQQALRRTMELYSNSTRFAFACNQSNKIIEPLQSQCAILRYSKLSDEDVLKRLLQIIKLEDVKY 180 (224)
T ss_dssp CCEEEEEESGGGSCHHHHHTTHHHHHHTTTTEEEEEEESCGGGSCHHHHTTSEEEECCCCCHHHHHHHHHHHHHHHTCCB
T ss_pred ceEEEEEecccccchhHHHHHhhhccccccceeeeeccCchhhhhhHHHHHHHHhhhcccchhhhHHHHHHHHHhcccCC
Confidence 5568889999753 33444444444445667777777664 332222 2336899999999999999887775333211
Q ss_pred chhHHHHHHHHHHhCCCchH
Q 039311 126 VGYMELSNKIIKYAKGVPLA 145 (909)
Q Consensus 126 ~~~~~l~~~iv~~c~GlPLa 145 (909)
+ .+....|++.|+|-+-.
T Consensus 181 ~--~~~l~~I~~~s~Gd~R~ 198 (224)
T d1sxjb2 181 T--NDGLEAIIFTAEGDMRQ 198 (224)
T ss_dssp C--HHHHHHHHHHHTTCHHH
T ss_pred C--HHHHHHHHHHcCCcHHH
Confidence 1 24568999999998643
No 53
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=46.30 E-value=48 Score=30.92 Aligned_cols=91 Identities=7% Similarity=0.030 Sum_probs=55.4
Q ss_pred CCCeEEEEEeCCCCHH-------------HHHHHhhccC--CCCCCCEEEEEeCCchhhhh----c-CCCcEEECCCCCH
Q 039311 48 SRKKVLIVFDDVSTSE-------------QMEFLIGNQG--WLMQGSRLIITARDKQVLKN----C-GVDTIYEVKELFD 107 (909)
Q Consensus 48 ~~kr~LlVLDDv~~~~-------------~~~~l~~~~~--~~~~gSrIivTTR~~~v~~~----~-~~~~~y~l~~L~~ 107 (909)
+.+..+|++||++... ....+..... ....+--||.||...+-+.. . ..++.++++..+.
T Consensus 95 ~~~p~il~iDeid~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvi~tTn~~~~ld~al~r~gRfd~~i~~~~P~~ 174 (258)
T d1e32a2 95 KNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDA 174 (258)
T ss_dssp HTCSEEEEESSGGGTCCHHHHCCCTTHHHHHHHHHHHHHTCCCSSCEEEEEEESCGGGSCGGGTSTTSSCEEEECCCCCH
T ss_pred hcCCeEEEehhhhhhccCCCCCCCchHHHHHHHhccccccccccCCccEEEeCCCccccchhhhhcccccceeECCCCCH
Confidence 5678999999997521 1122222122 22334455668877654332 1 3578999999999
Q ss_pred HHHHHHHHHhhcCCC-CCCchhHHHHHHHHHHhCCC
Q 039311 108 DDARMLFSRYAFGKN-YPNVGYMELSNKIIKYAKGV 142 (909)
Q Consensus 108 ~es~~LF~~~af~~~-~~~~~~~~l~~~iv~~c~Gl 142 (909)
++-.++|..+.-+.. ..+.++ ..+++.+.|.
T Consensus 175 ~~R~~il~~~l~~~~~~~~~~~----~~la~~t~G~ 206 (258)
T d1e32a2 175 TGRLEILQIHTKNMKLADDVDL----EQVANETHGH 206 (258)
T ss_dssp HHHHHHHHHTTTTSCBCTTCCH----HHHHHHCTTC
T ss_pred HHHHHHhhhhccCcccccccch----hhhhhcccCC
Confidence 999999987753322 222233 4667777775
No 54
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=44.10 E-value=31 Score=32.40 Aligned_cols=92 Identities=13% Similarity=0.090 Sum_probs=55.0
Q ss_pred CCCeEEEEEeCCCCH-------------H---HHHHHhhccCC--CCCCCEEEEEeCCchhhhh-----cCCCcEEECCC
Q 039311 48 SRKKVLIVFDDVSTS-------------E---QMEFLIGNQGW--LMQGSRLIITARDKQVLKN-----CGVDTIYEVKE 104 (909)
Q Consensus 48 ~~kr~LlVLDDv~~~-------------~---~~~~l~~~~~~--~~~gSrIivTTR~~~v~~~-----~~~~~~y~l~~ 104 (909)
+...++|++||++.. . ....+...++. ...+--||.||...+.+.. ...++.+++..
T Consensus 102 ~~~P~il~iDeiD~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~~~~~~v~vIatTn~~~~ld~al~R~gRfd~~i~i~~ 181 (256)
T d1lv7a_ 102 KAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGL 181 (256)
T ss_dssp TTCSEEEEETTHHHHTCCCSTTSCCTTCHHHHHHHHHHHHHHTCCSSSCEEEEEEESCTTTSCGGGGSTTSSCEEEECCC
T ss_pred HcCCEEEEEEChhhhCccCCCCCCCCcHHHHHHHHHHHHHhhCCCCCCCEEEEEeCCCcccCCHhHcCCCCCCEEEECCC
Confidence 567789999999531 1 12223332221 2233355668886544321 13578999999
Q ss_pred CCHHHHHHHHHHhhcCCC-CCCchhHHHHHHHHHHhCCCc
Q 039311 105 LFDDDARMLFSRYAFGKN-YPNVGYMELSNKIIKYAKGVP 143 (909)
Q Consensus 105 L~~~es~~LF~~~af~~~-~~~~~~~~l~~~iv~~c~GlP 143 (909)
.+.++-.++|..+.-+.. .++.++. .+++++.|.-
T Consensus 182 P~~~~R~~il~~~l~~~~~~~~~~~~----~la~~t~G~s 217 (256)
T d1lv7a_ 182 PDVRGREQILKVHMRRVPLAPDIDAA----IIARGTPGFS 217 (256)
T ss_dssp CCHHHHHHHHHHHHTTSCBCTTCCHH----HHHHTCTTCC
T ss_pred cCHHHHHHHHHHhccCCCcCcccCHH----HHHHhCCCCC
Confidence 999999999987764333 2334444 4556677764
No 55
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=38.36 E-value=33 Score=32.00 Aligned_cols=71 Identities=20% Similarity=0.185 Sum_probs=40.3
Q ss_pred hCCCeEEEEEeCCCC------------HHHHHHHhhccCCC-CCCCEE--EEEeCCchhhhhcC----CCcEEECCCCC-
Q 039311 47 LSRKKVLIVFDDVST------------SEQMEFLIGNQGWL-MQGSRL--IITARDKQVLKNCG----VDTIYEVKELF- 106 (909)
Q Consensus 47 L~~kr~LlVLDDv~~------------~~~~~~l~~~~~~~-~~gSrI--ivTTR~~~v~~~~~----~~~~y~l~~L~- 106 (909)
-+.....|+|||++. ...+..+...+... ..+++| |.||...+.+.... .+..+.++.+.
T Consensus 97 ~~~~p~il~iDEid~l~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~v~vi~tTn~~~~ld~~~~~~rF~~~i~~P~~~~ 176 (246)
T d1d2na_ 97 YKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLVLLKKAPPQGRKLLIIGTTSRKDVLQEMEMLNAFSTTIHVPNIAT 176 (246)
T ss_dssp HTSSEEEEEECCHHHHTTCBTTTTBCCHHHHHHHHHHTTCCCSTTCEEEEEEEESCHHHHHHTTCTTTSSEEEECCCEEE
T ss_pred hhcccceeehhhhhhHhhhcccccchhHHHHHHHHHHhcCCCccccceeeeeccCChhhccchhhcCccceEEecCCchh
Confidence 356789999999953 12234444433322 245554 45888776665431 24567776664
Q ss_pred HHHHHHHHHHh
Q 039311 107 DDDARMLFSRY 117 (909)
Q Consensus 107 ~~es~~LF~~~ 117 (909)
.++-++.+...
T Consensus 177 r~~il~~l~~~ 187 (246)
T d1d2na_ 177 GEQLLEALELL 187 (246)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 34555666544
No 56
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=33.18 E-value=39 Score=30.71 Aligned_cols=93 Identities=15% Similarity=0.172 Sum_probs=57.5
Q ss_pred CCeEEEEEeCCCC--HHHHHHHhhccCCCCCCCEEEEEeCC-chhhhhc-CCCcEEECCCCCHHHHHHHHHHhhcCCCCC
Q 039311 49 RKKVLIVFDDVST--SEQMEFLIGNQGWLMQGSRLIITARD-KQVLKNC-GVDTIYEVKELFDDDARMLFSRYAFGKNYP 124 (909)
Q Consensus 49 ~kr~LlVLDDv~~--~~~~~~l~~~~~~~~~gSrIivTTR~-~~v~~~~-~~~~~y~l~~L~~~es~~LF~~~af~~~~~ 124 (909)
.++..+++||++. ...+..+............+|.||.. ..+.... .....+.+.+.+.++..+...+.+......
T Consensus 108 ~~~~iilide~d~~~~~~~~~ll~~l~~~~~~~~~i~~~n~~~~i~~~l~sR~~~i~~~~~~~~~~~~~l~~~~~~e~i~ 187 (231)
T d1iqpa2 108 ASFKIIFLDEADALTQDAQQALRRTMEMFSSNVRFILSCNYSSKIIEPIQSRCAIFRFRPLRDEDIAKRLRYIAENEGLE 187 (231)
T ss_dssp CSCEEEEEETGGGSCHHHHHHHHHHHHHTTTTEEEEEEESCGGGSCHHHHHTEEEEECCCCCHHHHHHHHHHHHHTTTCE
T ss_pred CCceEEeehhhhhcchhHHHHHhhhcccCCcceEEEeccCChhhchHhHhCccccccccccchhhHHHHHHHHHHHhCCC
Confidence 3677888999864 34455555444323334455666544 3343332 223579999999999998888877544421
Q ss_pred CchhHHHHHHHHHHhCCCc
Q 039311 125 NVGYMELSNKIIKYAKGVP 143 (909)
Q Consensus 125 ~~~~~~l~~~iv~~c~GlP 143 (909)
-+ .+..+.|++.|+|-.
T Consensus 188 i~--~~~l~~I~~~~~gdi 204 (231)
T d1iqpa2 188 LT--EEGLQAILYIAEGDM 204 (231)
T ss_dssp EC--HHHHHHHHHHHTTCH
T ss_pred CC--HHHHHHHHHHcCCCH
Confidence 11 345678888998864
No 57
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=25.77 E-value=56 Score=30.61 Aligned_cols=92 Identities=8% Similarity=0.124 Sum_probs=53.9
Q ss_pred CCCeEEEEEeCCCCHH----------------HHHHHhhccCCC--CCCCEEEEEeCCchhhhh----c-CCCcEEECCC
Q 039311 48 SRKKVLIVFDDVSTSE----------------QMEFLIGNQGWL--MQGSRLIITARDKQVLKN----C-GVDTIYEVKE 104 (909)
Q Consensus 48 ~~kr~LlVLDDv~~~~----------------~~~~l~~~~~~~--~~gSrIivTTR~~~v~~~----~-~~~~~y~l~~ 104 (909)
....++|+|||++..- ....+...+... ..+--||.||...+-+.. . ..++.++++.
T Consensus 98 ~~~p~il~ideid~l~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~v~vi~ttn~~~~ld~al~r~gRf~~~i~~~~ 177 (265)
T d1r7ra3 98 QAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 177 (265)
T ss_dssp HTCSEEEEESSGGGTCCHHHHCCCTTHHHHHHHHHHHHHTCC------CCEEEECCBSCTTTSCGGGSSTTSEEEEECCC
T ss_pred hcCCcceeHHhhhhccccCCCcCCCCcHHHHHHHHHHHHHhhCcCCCCCEEEEEeCCCchhCCHHHhCCCCccEEEEecc
Confidence 4578999999996310 123344444322 234466777876654321 1 3467999999
Q ss_pred CCHHHHHHHHHHhhcCCC-CCCchhHHHHHHHHHHhCCCc
Q 039311 105 LFDDDARMLFSRYAFGKN-YPNVGYMELSNKIIKYAKGVP 143 (909)
Q Consensus 105 L~~~es~~LF~~~af~~~-~~~~~~~~l~~~iv~~c~GlP 143 (909)
.+.++-.++|..+.-+.. ..+.++ .++++++.|.-
T Consensus 178 p~~~~R~~il~~~l~~~~~~~~~~l----~~la~~t~g~s 213 (265)
T d1r7ra3 178 PDEKSRVAILKANLRKSPVAKDVDL----EFLAKMTNGFS 213 (265)
T ss_dssp CCCHHHHHHHHHHTTCC----CCCC----HHHHHHHCSSC
T ss_pred hHHHHHHHHHHHHhccCCchhhhhH----HHHHhcCCCCC
Confidence 999999999987653322 222344 45566667654
No 58
>d2b4aa1 c.23.1.1 (A:2-119) Hypothetical protein BH3024 {Bacillus halodurans [TaxId: 86665]}
Probab=20.99 E-value=88 Score=24.90 Aligned_cols=95 Identities=13% Similarity=0.140 Sum_probs=47.5
Q ss_pred HHHHHHhcCCCCcccCCccchHHHHHhhCCCeE-EEEEeCCC-CHHHHHHHhhccCCCCCCCEEEEEe-CCchhhhhcCC
Q 039311 20 ILLSAILDDGNVSIGCPSIGLNFRSKRLSRKKV-LIVFDDVS-TSEQMEFLIGNQGWLMQGSRLIITA-RDKQVLKNCGV 96 (909)
Q Consensus 20 ~ll~~i~~~~~~~~~~~~~~~~~i~~~L~~kr~-LlVLDDv~-~~~~~~~l~~~~~~~~~gSrIivTT-R~~~v~~~~~~ 96 (909)
+.+.+.+.+.+........+.+.+....+...+ +||+|=.- ..+-++.+..... .++...||+.| ++.........
T Consensus 16 ~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~~dliilD~~lp~~~G~el~~~ir~-~~~~~pii~lt~~~~~~~~~~~~ 94 (118)
T d2b4aa1 16 TLIQYHLNQLGAEVTVHPSGSAFFQHRSQLSTCDLLIVSDQLVDLSIFSLLDIVKE-QTKQPSVLILTTGRHELIESSEH 94 (118)
T ss_dssp HHHHHHHHHTTCEEEEESSHHHHHHTGGGGGSCSEEEEETTCTTSCHHHHHHHHTT-SSSCCEEEEEESCC--CCCCSSS
T ss_pred HHHHHHHHhcCCCeEEECCHHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHh-cCCCCcEEEEECCccHHHHHhhc
Confidence 344444434456665555666666655565667 66666442 2223433333222 23445555554 54433332222
Q ss_pred CcEEECCCCCHHHHHHHHH
Q 039311 97 DTIYEVKELFDDDARMLFS 115 (909)
Q Consensus 97 ~~~y~l~~L~~~es~~LF~ 115 (909)
..-|-.++.+.++-..-..
T Consensus 95 ~~dyl~KP~~~~eL~~~i~ 113 (118)
T d2b4aa1 95 NLSYLQKPFAISELRAAID 113 (118)
T ss_dssp CEEEEESSCCHHHHHHHHH
T ss_pred CCCEEECCCCHHHHHHHHH
Confidence 2257788888777655443
No 59
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=20.80 E-value=32 Score=32.29 Aligned_cols=59 Identities=19% Similarity=0.273 Sum_probs=36.2
Q ss_pred HHhhCCCeEEEEEeCCCC---HHHHHHHhhccCC-CCCCCEEEEEeCCchhhhhcCCCcEEECCC
Q 039311 44 SKRLSRKKVLIVFDDVST---SEQMEFLIGNQGW-LMQGSRLIITARDKQVLKNCGVDTIYEVKE 104 (909)
Q Consensus 44 ~~~L~~kr~LlVLDDv~~---~~~~~~l~~~~~~-~~~gSrIivTTR~~~v~~~~~~~~~y~l~~ 104 (909)
.+.+..+.-++|||++.. ...-+.+...+.. ...|.-|||||-+.+++.. ++++|.+..
T Consensus 219 ~~~l~~~~~llllDEp~~~Ld~~~~~~l~~~l~~~~~~~~qviv~TH~~~~~~~--~D~ii~l~~ 281 (292)
T g1f2t.1 219 SLYLAGEISLLILDEPTPYLDEERRRKLITIMERYLKKIPQVILVSHDEELKDA--ADHVIRISL 281 (292)
T ss_dssp HHHHHSSCSEEEEESCSCTTCHHHHHHHHHHHHHTGGGSSEEEEEESCGGGGGG--CSEEEEEEE
T ss_pred hhhhcCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEeecHHHHHh--CCEEEEEEe
Confidence 344555555899999964 2222222222211 1245689999999999876 477887643
Done!